Psyllid ID: psy8604

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTVRYY
Secondary Structure (PSIPRED)
ccccccccccEEEEEccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccHcccccEEEEEEccccccccccccHHHHHHHHHHccccHccccccccHHHHHHHHHHHcccEEEEcc
Coil and Loop (DISEMBL)
mntlnqanpFFIRCIKsntmkipnnfdIDTVLRQLRYTgmlktdipnnfdidTVQRQLRYTGmlktvryy
Flexible Loop (DISEMBL)
mntlnqanPFFIRCIKsntmkipnnfDIDTVLRQLRYTGMlktdipnnfdidtvqrqlrytgmlktvryy
Low Complexity Region (SEG)
MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTVRYY
Disordered region (IsUnstruct)
*******NPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTV***
Disordered Region (DISOPRED)
***LNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTVRYY
Disordered Region (DISEMBL)
MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTVRYY
Disordered Region (DISPRO)
****NQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTVRYY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRYTGMLKTVRYY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	70	2.2.26 [Sep-21-2011]
D3ZJP6	2060	Unconventional myosin-X O	no	N/A	0.614	0.020	0.627	2e-10
F8VQB6	2062	Unconventional myosin-X O	yes	N/A	0.614	0.020	0.627	3e-10
Q9HD67	2058	Unconventional myosin-X O	yes	N/A	0.614	0.020	0.604	9e-10
P79114	2052	Unconventional myosin-X O	yes	N/A	0.614	0.020	0.581	2e-09
Q9Z1N3	2626	Unconventional myosin-IXa	no	N/A	0.614	0.016	0.604	5e-09
Q8C170	2542	Unconventional myosin-IXa	no	N/A	0.614	0.016	0.604	8e-09
B2RTY4	2548	Unconventional myosin-IXa	no	N/A	0.614	0.016	0.604	1e-08
P91443	2098	Unconventional myosin hea	no	N/A	0.614	0.020	0.604	9e-08
Q63358	1980	Unconventional myosin-IXb	no	N/A	0.614	0.021	0.581	2e-07
Q9QY06	2114	Unconventional myosin-IXb	no	N/A	0.614	0.020	0.581	2e-07

>sp|D3ZJP6|MYO10_RAT Unconventional myosin-X OS=Rattus norvegicus GN=Myo10 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+ +NPFF+RCIK NT K+P+ FD   VL QLRY+GML+T
Sbjct: 623 MATLSSSNPFFVRCIKPNTQKMPDQFDQAVVLNQLRYSGMLET 665

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. MYO10 binds to actin filaments and actin bundles and functions as plus end-directed motor. The tail domain binds to membranous compartments containing phosphatidylinositol 3,4,5-trisphosphate or integrins, and mediates cargo transport along actin filaments. Regulates cell shape, cell spreading and cell adhesion. May play a role in neurite outgrowth and axon guidance. Plays a role in formation of the podosome belt in osteoclasts (By similarity). Stimulates the formation and elongation of filopodia.
Rattus norvegicus (taxid: 10116)

>sp|F8VQB6|MYO10_MOUSE Unconventional myosin-X OS=Mus musculus GN=Myo10 PE=1 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+ +NPFF+RCIK NT K+P+ FD   VL QLRY+GML+T
Sbjct: 623 MATLSSSNPFFVRCIKPNTQKMPDQFDQVVVLNQLRYSGMLET 665

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. MYO10 binds to actin filaments and actin bundles and functions as plus end-directed motor. The tail domain binds to membranous compartments containing phosphatidylinositol 3,4,5-trisphosphate or integrins, and mediates cargo transport along actin filaments (By similarity). Regulates cell shape, cell spreading and cell adhesion. Stimulates the formation and elongation of filopodia. May play a role in neurite outgrowth and axon guidance. Plays a role in formation of the podosome belt in osteoclasts.

Mus musculus (taxid: 10090)

>sp|Q9HD67|MYO10_HUMAN Unconventional myosin-X OS=Homo sapiens GN=MYO10 PE=1 SV=3

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+ +NPFF+RCIK N  K+P+ FD   VL QLRY+GML+T
Sbjct: 623 MATLSSSNPFFVRCIKPNMQKMPDQFDQAVVLNQLRYSGMLET 665

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. MYO10 binds to actin filaments and actin bundles and functions as plus end-directed motor. The tail domain binds to membranous compartments containing phosphatidylinositol 3,4,5-trisphosphate or integrins, and mediates cargo transport along actin filaments. Regulates cell shape, cell spreading and cell adhesion. Stimulates the formation and elongation of filopodia. May play a role in neurite outgrowth and axon guidance. Plays a role in formation of the podosome belt in osteoclasts.

Homo sapiens (taxid: 9606)

>sp|P79114|MYO10_BOVIN Unconventional myosin-X OS=Bos taurus GN=MYO10 PE=1 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+ +NPFF+RCIK N  K+P+ FD   V+ QLRY+GML+T
Sbjct: 623 MATLSASNPFFVRCIKPNMQKMPDQFDQAVVVNQLRYSGMLET 665

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. MYO10 binds to actin filaments and actin bundles and functions as plus end-directed motor. The tail domain binds to membranous compartments containing phosphatidylinositol 3,4,5-trisphosphate, which are then moved relative to actin filaments. Stimulates the formation and elongation of filopodia. Regulates cell shape, cell spreading and cell adhesion. Plays a role in formation of the podosome belt in osteoclasts.

Bos taurus (taxid: 9913)

>sp|Q9Z1N3|MYO9A_RAT Unconventional myosin-IXa OS=Rattus norvegicus GN=Myo9a PE=1 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+QA P+F++CI+SN  K+P  F    VLRQLRYTGML+T
Sbjct: 903 METLDQAEPYFVKCIRSNAEKLPLRFSDALVLRQLRYTGMLET 945

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho by stimulating it's GTPase activity in neurons, has a role in the regulation of neuronal morphology and function.

Rattus norvegicus (taxid: 10116)

>sp|Q8C170|MYO9A_MOUSE Unconventional myosin-IXa OS=Mus musculus GN=Myo9a PE=1 SV=2

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL QA P+F++CI+SN  K+P  F    VLRQLRYTGML+T
Sbjct: 903 METLGQAEPYFVKCIRSNAEKLPLRFSDALVLRQLRYTGMLET 945

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho activity in neurons, has a role in the regulation of neuronal morphology and function.

Mus musculus (taxid: 10090)

>sp|B2RTY4|MYO9A_HUMAN Unconventional myosin-IXa OS=Homo sapiens GN=MYO9A PE=1 SV=2

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 32/43 (74%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL QA P+F++CI+SN  K+P  F    VLRQLRYTGML+T
Sbjct: 902 METLGQAEPYFVKCIRSNAEKLPLRFSDVLVLRQLRYTGMLET 944

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho activity in neurons, has a role in the regulation of neuronal morphology and function.

Homo sapiens (taxid: 9606)

>sp|P91443|HUM6_CAEEL Unconventional myosin heavy chain 6 OS=Caenorhabditis elegans GN=hum-6 PE=1 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 31/43 (72%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+ L Q +PFFIRCIK N MK     D D VLRQLRY+GM++T
Sbjct: 613 MSQLTQTHPFFIRCIKPNEMKRALVMDRDLVLRQLRYSGMMET 655

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.

Caenorhabditis elegans (taxid: 6239)

>sp|Q63358|MYO9B_RAT Unconventional myosin-IXb OS=Rattus norvegicus GN=Myo9b PE=1 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           +  L +A PFFIRCI+SN  K    FD + VL+QLRYTGML+T
Sbjct: 840 LEALGKAEPFFIRCIRSNAEKKELCFDDELVLQQLRYTGMLET 882

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.

Rattus norvegicus (taxid: 10116)

>sp|Q9QY06|MYO9B_MOUSE Unconventional myosin-IXb OS=Mus musculus GN=Myo9b PE=1 SV=2

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/43 (58%), Positives = 31/43 (72%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           +  L +A PFFIRCI+SN  K    FD + VL+QLRYTGML+T
Sbjct: 839 LEALGKAEPFFIRCIRSNAEKKELCFDDELVLQQLRYTGMLET 881

Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
270002356	2021	hypothetical protein TcasGA2_TC001372 [T	0.614	0.021	0.813	1e-12
189234985	1843	PREDICTED: similar to myosin-rhogap prot	0.614	0.023	0.813	2e-12
307214947	2177	Myosin-IXb [Harpegnathos saltator]	0.614	0.019	0.790	3e-12
350414458	2176	PREDICTED: myosin-IXa-like [Bombus impat	0.614	0.019	0.790	3e-12
340715385	2139	PREDICTED: LOW QUALITY PROTEIN: myosin-I	0.614	0.020	0.790	3e-12
328785348	2183	PREDICTED: myosin-IXa [Apis mellifera]	0.614	0.019	0.790	4e-12
383855596	2288	PREDICTED: unconventional myosin-IXa-lik	0.614	0.018	0.790	4e-12
332022806	2287	Myosin-IXa [Acromyrmex echinatior]	0.614	0.018	0.813	4e-12
380020084	2290	PREDICTED: LOW QUALITY PROTEIN: unconven	0.614	0.018	0.790	4e-12
357623270	1062	hypothetical protein KGM_18974 [Danaus p	0.614	0.040	0.790	5e-12

>gi|270002356|gb|EEZ98803.1| hypothetical protein TcasGA2_TC001372 [Tribolium castaneum]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 39/43 (90%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN+ KIPN FD +TV RQLRYTGML+T
Sbjct: 873 MDTLNQANPFFIRCIKSNSNKIPNQFDDETVQRQLRYTGMLET 915

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234985|ref|XP_968193.2| PREDICTED: similar to myosin-rhogap protein, myr [Tribolium castaneum]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/43 (81%), Positives = 39/43 (90%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN+ KIPN FD +TV RQLRYTGML+T
Sbjct: 695 MDTLNQANPFFIRCIKSNSNKIPNQFDDETVQRQLRYTGMLET 737

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214947|gb|EFN89792.1| Myosin-IXb [Harpegnathos saltator]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  K+PN FD +TV RQLRYTGML+T
Sbjct: 783 MDTLNQANPFFIRCIKSNANKVPNEFDEETVQRQLRYTGMLET 825

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350414458|ref|XP_003490324.1| PREDICTED: myosin-IXa-like [Bombus impatiens]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  K+PN FD +TV RQLRYTGML+T
Sbjct: 783 MDTLNQANPFFIRCIKSNANKVPNEFDEETVQRQLRYTGMLET 825

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715385|ref|XP_003396195.1| PREDICTED: LOW QUALITY PROTEIN: myosin-IXa-like [Bombus terrestris]

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  K+PN FD +TV RQLRYTGML+T
Sbjct: 747 MDTLNQANPFFIRCIKSNANKVPNEFDEETVQRQLRYTGMLET 789

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785348|ref|XP_003250584.1| PREDICTED: myosin-IXa [Apis mellifera]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  K+PN FD +TV RQLRYTGML+T
Sbjct: 783 MDTLNQANPFFIRCIKSNANKVPNEFDEETVQRQLRYTGMLET 825

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855596|ref|XP_003703296.1| PREDICTED: unconventional myosin-IXa-like [Megachile rotundata]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  K+PN FD +TV RQLRYTGML+T
Sbjct: 892 MDTLNQANPFFIRCIKSNANKVPNEFDEETVQRQLRYTGMLET 934

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022806|gb|EGI63079.1| Myosin-IXa [Acromyrmex echinatior]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/43 (81%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  KIPN FD +TV RQLRYTGML+T
Sbjct: 894 MDTLNQANPFFIRCIKSNANKIPNEFDEETVQRQLRYTGMLET 936

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020084|ref|XP_003693926.1| PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-IXa-like [Apis florea]

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLNQANPFFIRCIKSN  K+PN FD +TV RQLRYTGML+T
Sbjct: 892 MDTLNQANPFFIRCIKSNANKVPNEFDEETVQRQLRYTGMLET 934

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357623270|gb|EHJ74495.1| hypothetical protein KGM_18974 [Danaus plexippus]

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLNQANPFFIRCIKSN+ K+PN FD +TV RQLRYTGML+T
Sbjct: 819 METLNQANPFFIRCIKSNSDKVPNVFDEETVQRQLRYTGMLET 861

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
WB|WBGene00002040	1880	hum-7 [Caenorhabditis elegans	0.614	0.022	0.674	1.4e-09
UNIPROTKB|F1M9V6	2059	Myo10 "Unconventional myosin-X	0.614	0.020	0.627	3.5e-09
RGD|1307193	2060	Myo10 "myosin X" [Rattus norve	0.614	0.020	0.627	3.5e-09
MGI|MGI:107716	2062	Myo10 "myosin X" [Mus musculus	0.614	0.020	0.627	4.5e-09
UNIPROTKB|F1Q2W2	1847	MYO10 "Uncharacterized protein	0.614	0.023	0.627	5.7e-09
UNIPROTKB|F1NPP1	2035	MYO10 "Uncharacterized protein	0.614	0.021	0.604	9e-09
UNIPROTKB|Q9HD67	2058	MYO10 "Unconventional myosin-X	0.614	0.020	0.604	1.5e-08
UNIPROTKB|D6RGD1	830	MYO10 "Unconventional myosin-X	0.614	0.051	0.604	1.6e-08
UNIPROTKB|F1NEA4	2040	F1NEA4 "Uncharacterized protei	0.614	0.021	0.674	1.8e-08
UNIPROTKB|F1SRM1	2010	MYO10 "Uncharacterized protein	0.614	0.021	0.581	2.9e-08

WB|WBGene00002040 hum-7 [Caenorhabditis elegans (taxid:6239)]

 Score = 150 (57.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 29/43 (67%), Positives = 35/43 (81%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M+TL  A P+FIRCIKSN  KI N+FD + +LRQLRYTGML+T
Sbjct:   833 MSTLANATPYFIRCIKSNNDKIANHFDDNIILRQLRYTGMLET 875

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0060002 "plus-end directed microfilament motor activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IPI

GO:0033275 "actin-myosin filament sliding" evidence=IDA

UNIPROTKB|F1M9V6 Myo10 "Unconventional myosin-X" [Rattus norvegicus (taxid:10116)]

 Score = 147 (56.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK NT K+P+ FD   VL QLRY+GML+T
Sbjct:   622 MATLSSSNPFFVRCIKPNTQKMPDQFDQAVVLNQLRYSGMLET 664

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

RGD|1307193 Myo10 "myosin X" [Rattus norvegicus (taxid:10116)]

 Score = 147 (56.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK NT K+P+ FD   VL QLRY+GML+T
Sbjct:   623 MATLSSSNPFFVRCIKPNTQKMPDQFDQAVVLNQLRYSGMLET 665

GO:0001726 "ruffle" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=ISS

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005938 "cell cortex" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=ISO;ISS

GO:0016459 "myosin complex" evidence=IEA

GO:0022409 "positive regulation of cell-cell adhesion" evidence=IEA;ISO

GO:0030027 "lamellipodium" evidence=IEA

GO:0030175 "filopodium" evidence=ISO

GO:0030705 "cytoskeleton-dependent intracellular transport" evidence=ISS

GO:0030898 "actin-dependent ATPase activity" evidence=ISS

GO:0031527 "filopodium membrane" evidence=IEA

GO:0032433 "filopodium tip" evidence=ISS

GO:0043005 "neuron projection" evidence=IEA;ISO

GO:0043025 "neuronal cell body" evidence=IEA;ISO

GO:0051015 "actin filament binding" evidence=ISS

GO:0051489 "regulation of filopodium assembly" evidence=ISO;ISS

GO:0060002 "plus-end directed microfilament motor activity" evidence=ISS

MGI|MGI:107716 Myo10 "myosin X" [Mus musculus (taxid:10090)]

 Score = 146 (56.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK NT K+P+ FD   VL QLRY+GML+T
Sbjct:   623 MATLSSSNPFFVRCIKPNTQKMPDQFDQVVVLNQLRYSGMLET 665

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001726 "ruffle" evidence=ISO

GO:0003774 "motor activity" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0022409 "positive regulation of cell-cell adhesion" evidence=IGI

GO:0030027 "lamellipodium" evidence=ISO

GO:0030175 "filopodium" evidence=IDA

GO:0042995 "cell projection" evidence=IEA

GO:0043005 "neuron projection" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0048870 "cell motility" evidence=IC

GO:0051015 "actin filament binding" evidence=ISO

GO:0051489 "regulation of filopodium assembly" evidence=ISO

UNIPROTKB|F1Q2W2 MYO10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 147 (56.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK NT K+P+ FD   VL QLRY+GML+T
Sbjct:   420 MATLSSSNPFFVRCIKPNTQKMPDQFDQAVVLNQLRYSGMLET 462

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1NPP1 MYO10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 143 (55.4 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK N  K+P+ FD   VL QLRY+GML+T
Sbjct:   584 MATLSSSNPFFVRCIKPNVQKMPDQFDQTVVLNQLRYSGMLET 626

GO:0003774 "motor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0022409 "positive regulation of cell-cell adhesion" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0051489 "regulation of filopodium assembly" evidence=IEA

UNIPROTKB|Q9HD67 MYO10 "Unconventional myosin-X" [Homo sapiens (taxid:9606)]

 Score = 141 (54.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK N  K+P+ FD   VL QLRY+GML+T
Sbjct:   623 MATLSSSNPFFVRCIKPNMQKMPDQFDQAVVLNQLRYSGMLET 665

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0022409 "positive regulation of cell-cell adhesion" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0031527 "filopodium membrane" evidence=IEA

GO:0030705 "cytoskeleton-dependent intracellular transport" evidence=ISS

GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding" evidence=ISS

GO:0030898 "actin-dependent ATPase activity" evidence=ISS

GO:0051015 "actin filament binding" evidence=ISS

GO:0060002 "plus-end directed microfilament motor activity" evidence=ISS

GO:0032433 "filopodium tip" evidence=ISS

GO:0051489 "regulation of filopodium assembly" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0007411 "axon guidance" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|D6RGD1 MYO10 "Unconventional myosin-X" [Homo sapiens (taxid:9606)]

 Score = 141 (54.7 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK N  K+P+ FD   VL QLRY+GML+T
Sbjct:   634 MATLSSSNPFFVRCIKPNMQKMPDQFDQAVVLNQLRYSGMLET 676

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1NEA4 F1NEA4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 144 (55.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL  +NPFFIRCIK NT K PN F+ D VL QLRY+GML+T
Sbjct:   620 MATLFTSNPFFIRCIKPNTEKAPNLFNPDVVLNQLRYSGMLET 662

GO:0003774 "motor activity" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1SRM1 MYO10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 138 (53.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
 Identities = 25/43 (58%), Positives = 33/43 (76%)

Query:     1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
             M TL+ +NPFF+RCIK N  K+P+ FD   V+ QLRY+GML+T
Sbjct:   584 MATLSSSNPFFVRCIKPNMQKMPDQFDQAVVVNQLRYSGMLET 626

GO:0005543 "phospholipid binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0051489 "regulation of filopodium assembly" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0022409 "positive regulation of cell-cell adhesion" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9HD67	MYO10_HUMAN	No assigned EC number	0.6046	0.6142	0.0208	yes	N/A
F8VQB6	MYO10_MOUSE	No assigned EC number	0.6279	0.6142	0.0208	yes	N/A
P79114	MYO10_BOVIN	No assigned EC number	0.5813	0.6142	0.0209	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	70
cd01385	692	cd01385, MYSc_type_IX, Myosin motor domain, type I	1e-18
smart00242	677	smart00242, MYSc, Myosin	1e-16
cd01381	671	cd01381, MYSc_type_VII, Myosin motor domain, type	2e-15
cd00124	679	cd00124, MYSc, Myosin motor domain	4e-15
COG5022	1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	1e-11
pfam00063	679	pfam00063, Myosin_head, Myosin head (motor domain)	4e-11
cd01387	677	cd01387, MYSc_type_XV, Myosin motor domain, type X	7e-10
cd01380	691	cd01380, MYSc_type_V, Myosin motor domain, type V	2e-09
cd01378	674	cd01378, MYSc_type_I, Myosin motor domain, type I	4e-09
cd01377	693	cd01377, MYSc_type_II, Myosin motor domain, type I	5e-09
cd01379	653	cd01379, MYSc_type_III, Myosin motor domain, type	2e-08
cd01383	677	cd01383, MYSc_type_VIII, Myosin motor domain, plan	6e-08
cd01384	674	cd01384, MYSc_type_XI, Myosin motor domain, plant-	3e-07
PTZ00014	821	PTZ00014, PTZ00014, myosin-A; Provisional	4e-06
cd01382	717	cd01382, MYSc_type_VI, Myosin motor domain, type V	0.001

>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins

 Score = 77.2 bits (190), Expect = 1e-18
 Identities = 31/43 (72%), Positives = 34/43 (79%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL +A PFFIRCIKSN  KI N FD + VLRQLRYTGML+T
Sbjct: 575 METLGKAEPFFIRCIKSNAEKIENCFDDELVLRQLRYTGMLET 617

Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 692

>gnl|CDD|214580 smart00242, MYSc, Myosin

 Score = 71.4 bits (176), Expect = 1e-16
 Identities = 25/43 (58%), Positives = 29/43 (67%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLN  NP FIRCIK N  K P +FD   VL QLRY G+L+ 
Sbjct: 559 MDTLNSTNPHFIRCIKPNEEKKPGDFDSSLVLHQLRYLGVLEN 601

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin. Length = 677

>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins

 Score = 67.9 bits (166), Expect = 2e-15
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+   PFFIRCIK N  K P  FD +  +RQLRY+GM++T
Sbjct: 553 MRTLSSCQPFFIRCIKPNEYKEPMVFDRELCVRQLRYSGMMET 595

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 671

>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain

 Score = 67.3 bits (165), Expect = 4e-15
 Identities = 26/43 (60%), Positives = 29/43 (67%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P FIRCIK N  K PN FD   VL+QLRY G+L+T
Sbjct: 563 MATLNSTEPHFIRCIKPNEEKKPNAFDSGKVLQQLRYLGILET 605

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 679

>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]

 Score = 57.4 bits (139), Expect = 1e-11
 Identities = 23/43 (53%), Positives = 27/43 (62%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLN   P +IRCIK N  K P  FD   VL QLR  G+L+T
Sbjct: 619 MSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLET 661

Length = 1463

>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain)

 Score = 55.8 bits (135), Expect = 4e-11
 Identities = 21/43 (48%), Positives = 24/43 (55%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL   NP F+RCIK N  K    FD   VL QLR  G+L+ 
Sbjct: 573 MKTLRSTNPHFVRCIKPNEKKAAGPFDSSLVLHQLRCLGVLEG 615

Length = 679

>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins

 Score = 52.2 bits (125), Expect = 7e-10
 Identities = 19/43 (44%), Positives = 29/43 (67%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           +  + + NP F+RC+K N  K P  F+ D V+ QLRY+G+L+T
Sbjct: 561 VEKMERCNPLFVRCLKPNHKKEPGLFEPDVVMAQLRYSGVLET 603

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677

>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins

 Score = 51.2 bits (123), Expect = 2e-09
 Identities = 23/43 (53%), Positives = 29/43 (67%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M+TLN  NP +IRCIK N  K P  F+   VL+QLR  G+L+T
Sbjct: 575 MSTLNSTNPHYIRCIKPNDEKKPFKFEPKRVLQQLRACGVLET 617

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 691

>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGML 41
           + TL +  P +IRCIK N  K PN+FD   VL Q++Y G+L
Sbjct: 556 VETLMKCTPHYIRCIKPNETKSPNDFDESRVLHQVKYLGLL 596

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins

 Score = 49.9 bits (120), Expect = 5e-09
 Identities = 20/41 (48%), Positives = 22/41 (53%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGML 41
           M TL   NP F+RCI  N  K P   D   VL QLR  G+L
Sbjct: 576 MTTLRSTNPHFVRCIIPNEEKKPGKLDAHLVLDQLRCNGVL 616

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 693

>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins

 Score = 48.3 bits (115), Expect = 2e-08
 Identities = 19/35 (54%), Positives = 25/35 (71%)

Query: 9   PFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           P F+RCIK N  +    FD + VL+QLRYTG+L+T
Sbjct: 547 PHFVRCIKPNEDRQAKKFDAEKVLKQLRYTGILET 581

Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 653

>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata

 Score = 46.7 bits (111), Expect = 6e-08
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M  L    P FIRCIK N  ++P  ++   VL+QLR  G+L+
Sbjct: 562 MQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCCGVLE 603

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677

>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 19/41 (46%), Positives = 26/41 (63%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGML 41
           M TL+   P +IRCIK N +  P  F+ + VL+QLR  G+L
Sbjct: 556 METLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVL 596

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional

 Score = 41.9 bits (99), Expect = 4e-06
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQL 35
           M+ +N   P FIRCIK N  K P +++   VL QL
Sbjct: 652 MSLINSTEPHFIRCIKPNENKKPLDWNSSKVLIQL 686

Length = 821

>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGML 41
           +  L      FIRCIK N   + + F+   +L QL+ +GM+
Sbjct: 601 LEKLRSTGSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMV 641

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 717

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	70
COG5022	1463	Myosin heavy chain [Cytoskeleton]	99.9
PTZ00014	821	myosin-A; Provisional	99.88
cd01384	674	MYSc_type_XI Myosin motor domain, plant-specific t	99.87
cd01383	677	MYSc_type_VIII Myosin motor domain, plant-specific	99.87
cd01378	674	MYSc_type_I Myosin motor domain, type I myosins. M	99.87
cd01379	653	MYSc_type_III Myosin motor domain, type III myosin	99.87
cd01387	677	MYSc_type_XV Myosin motor domain, type XV myosins.	99.87
cd01377	693	MYSc_type_II Myosin motor domain, type II myosins.	99.87
cd01385	692	MYSc_type_IX Myosin motor domain, type IX myosins.	99.87
cd01381	671	MYSc_type_VII Myosin motor domain, type VII myosin	99.87
cd01380	691	MYSc_type_V Myosin motor domain, type V myosins. M	99.87
cd00124	679	MYSc Myosin motor domain. This catalytic (head) do	99.86
cd01386	767	MYSc_type_XVIII Myosin motor domain, type XVIII my	99.86
cd01382	717	MYSc_type_VI Myosin motor domain, type VI myosins.	99.86
smart00242	677	MYSc Myosin. Large ATPases. ATPase; molecular moto	99.85
PF00063	689	Myosin_head: Myosin head (motor domain); InterPro:	99.8
KOG0161|consensus	1930		99.76
KOG0160|consensus	862		99.67
KOG0162|consensus	1106		99.66
KOG0164|consensus	1001		99.63
KOG0163|consensus	1259		99.37

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=99.90  E-value=1.3e-24  Score=167.65  Aligned_cols=63  Identities=41%  Similarity=0.663  Sum_probs=61.0

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||++|.|+.||..+|+.||||+||+|+|      ||.|++|++|++||++|.-
T Consensus       619 m~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p  687 (1463)
T COG5022         619 MSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSP  687 (1463)
T ss_pred             HHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcc
Confidence            67899999999999999999999999999999999999999997      9999999999999999876

>PTZ00014 myosin-A; Provisional

Probab=99.88  E-value=1.3e-23  Score=157.78  Aligned_cols=63  Identities=30%  Similarity=0.504  Sum_probs=60.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||++|..
T Consensus       652 m~~L~~t~phfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~f~~F~~rY~~L~~  720 (821)
T PTZ00014        652 MSLINSTEPHFIRCIKPNENKKPLDWNSSKVLIQLHSLSILEALQLRQLGFSYRRTFAEFLSQFKYLDL  720 (821)
T ss_pred             HHHHhccCCeEEEEeCcCcccCccccchHhHHHHhhhhhHHHHHHHHhcCCcccccHHHHHHHHHhcCc
Confidence            67899999999999999999999999999999999999999997      9999999999999999864

>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

Probab=99.87  E-value=3.2e-23  Score=153.30  Aligned_cols=63  Identities=33%  Similarity=0.568  Sum_probs=60.2

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.++|+.||...|.+||+|+||+|++      ||+|++|.+|+.||+.|.-
T Consensus       556 ~~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~r~~~~~F~~ry~~L~~  624 (674)
T cd01384         556 METLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIRISCAGYPTRRTFDEFLDRFGILAP  624 (674)
T ss_pred             HHHHhccCCeEEEEeCCCcccCCCccCHHHHHHHHHHcchHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999999864

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act

>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata

Probab=99.87  E-value=2.6e-23  Score=153.83  Aligned_cols=63  Identities=32%  Similarity=0.615  Sum_probs=60.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+|++|++      ||+|++|.+|++||+.+.-
T Consensus       562 ~~~L~~t~phfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~~F~~rY~~L~~  630 (677)
T cd01383         562 MQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCCGVLEVVRISRSGYPTRMTHQEFARRYGFLLL  630 (677)
T ss_pred             HHHHhCCCCeEEEEECcccccCcCccchhhhHHHhhhccHHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999999865

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f

>cd01378 MYSc_type_I Myosin motor domain, type I myosins

Probab=99.87  E-value=2.5e-23  Score=153.76  Aligned_cols=63  Identities=33%  Similarity=0.610  Sum_probs=60.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.++|+.||..+|++||+|+||+|++      ||+|++|++|++||+.+.-
T Consensus       556 m~~L~~t~phfIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~~~~F~~rY~~L~~  624 (674)
T cd01378         556 VETLMKCTPHYIRCIKPNETKSPNDFDESRVLHQVKYLGLLENVRVRRAGFAYRQTFDKFLQRYKLLSP  624 (674)
T ss_pred             HHHHHccCCeEEEEECCCccCCchhcCHHHHHHHHHhcChHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999999865

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon

>cd01379 MYSc_type_III Myosin motor domain, type III myosins

Probab=99.87  E-value=3.6e-23  Score=152.60  Aligned_cols=63  Identities=32%  Similarity=0.626  Sum_probs=60.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|.+|+||||||||||+.+.|+.||...|.+||+|+|++|++      ||+|++|++|+.||+.|..
T Consensus       539 ~~~l~~t~~hfIRCIKPN~~k~~~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~r~~~~~F~~rY~~l~~  607 (653)
T cd01379         539 LSKMVVGQPHFVRCIKPNEDRQAKKFDAEKVLKQLRYTGILETARIRRQGFSHRILFANFIRRYCFLAY  607 (653)
T ss_pred             HHHHhccCCceEEeeCCCcccCccccCHHHHHHHHHHcchHHHHHHHHcCCCccccHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999999999999997      9999999999999999864

Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the

>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins

Probab=99.87  E-value=3.8e-23  Score=152.89  Aligned_cols=64  Identities=34%  Similarity=0.651  Sum_probs=60.7

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGML   64 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~~   64 (70)
                      |+.|++|+||||||||||+.+.|+.||..+|++||+|+|++|++      ||+|++|++|++||+.|...
T Consensus       561 ~~~l~~t~phfIRCIKPN~~k~~~~Fd~~~V~~QLr~~GvlE~vri~r~Gyp~r~~~~~F~~rY~~L~~~  630 (677)
T cd01387         561 VEKMERCNPLFVRCLKPNHKKEPGLFEPDVVMAQLRYSGVLETVRIRKEGFPVRLPFQHFIDRYRCLVAL  630 (677)
T ss_pred             HHHHhcCCCeEEEEECCCCcCCccccChHHHHHHHHHhchHHHHHHHHccCCccccHHHHHHHHHHhCcc
Confidence            56789999999999999999999999999999999999999997      99999999999999999654

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus

>cd01377 MYSc_type_II Myosin motor domain, type II myosins

Probab=99.87  E-value=3.9e-23  Score=153.11  Aligned_cols=64  Identities=34%  Similarity=0.535  Sum_probs=60.6

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGML   64 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~~   64 (70)
                      |++|++|+||||||||||+.+.|+.||...|.+||+|+||+|++      ||.|++|++|++||+.|...
T Consensus       576 ~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlEtvrirr~Gyp~R~~f~~F~~rY~~L~~~  645 (693)
T cd01377         576 MTTLRSTNPHFVRCIIPNEEKKPGKLDAHLVLDQLRCNGVLEGIRICRKGFPNRILYAEFRQRYEILAPN  645 (693)
T ss_pred             HHHHhccCCeEEEEeCcCccCCCCccCHHHHHHHHHhcchHHHHHHHHcCCCccccHHHHHHHHHHhCcc
Confidence            56789999999999999999999999999999999999999997      99999999999999998653

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro

>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins

Probab=99.87  E-value=4.4e-23  Score=152.88  Aligned_cols=63  Identities=52%  Similarity=0.748  Sum_probs=60.0

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |+.|++|+||||||||||+.+.|+.||..+|.+||+|+|++|++      ||.|++|++|++||+.+..
T Consensus       575 ~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlE~irirr~Gyp~R~~~~~F~~rY~~L~~  643 (692)
T cd01385         575 METLGKAEPFFIRCIKSNAEKIENCFDDELVLRQLRYTGMLETVRIRRAGYSVRYTYQDFTQQYRILLP  643 (692)
T ss_pred             HHHHhccCCeEEEEeCCCCccCcCccCHHHHHHHHHhhchHHHHHHHhccCCccccHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999999863

Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea

>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins

Probab=99.87  E-value=4.2e-23  Score=152.55  Aligned_cols=63  Identities=41%  Similarity=0.654  Sum_probs=60.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||..+|.+||+|+||+|++      ||+|++|.+|+.||+.+.-
T Consensus       553 ~~~L~~t~phfIRCIKPN~~k~~~~fd~~~V~~QLr~~Gvle~iri~r~Gyp~r~~~~~F~~rY~~L~~  621 (671)
T cd01381         553 MRTLSSCQPFFIRCIKPNEYKEPMVFDRELCVRQLRYSGMMETIRIRRAGYPIRHTFREFVERYRVLVP  621 (671)
T ss_pred             HHHHhcCCCeEEEEeCcchhhccCccChHHHHHHHHhcchHHHHHHHHcCcCceecHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999999875

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr

>cd01380 MYSc_type_V Myosin motor domain, type V myosins

Probab=99.87  E-value=7e-23  Score=151.75  Aligned_cols=64  Identities=39%  Similarity=0.618  Sum_probs=60.7

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGML   64 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~~   64 (70)
                      |++|++|+||||||||||+.+.|+.||..+|++||+|+|++|++      ||+|++|++|+.||+.|.-.
T Consensus       575 ~~~L~~t~phfIRCIKPN~~k~~~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~~F~~ry~~L~~~  644 (691)
T cd01380         575 MSTLNSTNPHYIRCIKPNDEKKPFKFEPKRVLQQLRACGVLETIRISAAGFPSRWTYEEFAQRYRVLVPS  644 (691)
T ss_pred             HHHHhccCCeEEEEeCCCcccCcCccCHHHHHHHHHHhchHHHHHHHhccCCccccHHHHHHHHHHhCcc
Confidence            56789999999999999999999999999999999999999997      99999999999999998754

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act

>cd00124 MYSc Myosin motor domain

Probab=99.86  E-value=9.5e-23  Score=150.63  Aligned_cols=63  Identities=44%  Similarity=0.709  Sum_probs=60.0

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||...|.+||+|+|++|++      ||.|++|++|++||+.+.-
T Consensus       563 ~~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~irirr~Gyp~R~~~~eF~~rY~~L~~  631 (679)
T cd00124         563 MATLNSTEPHFIRCIKPNEEKKPNAFDSGKVLQQLRYLGILETIRIRRLGFSVRIPFDEFLSRYRFLAP  631 (679)
T ss_pred             HHHHhcCCCeEEEEECCCcccCCCccChHHHHHHHHHhchHHHHHHHHccCCceeeHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999998864

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila

>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins

Probab=99.86  E-value=1e-22  Score=152.19  Aligned_cols=63  Identities=21%  Similarity=0.344  Sum_probs=58.7

Q ss_pred             CCCCCCCCCceeeeecCCCCCC----------------------CCCccHHHHHHHHHHhCccccC------CCCCCCHH
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKI----------------------PNNFDIDTVLRQLRYTGMLKTD------IPNNFDID   52 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~----------------------p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~   52 (70)
                      |++|++|+||||||||||+.|.                      |+.||...|++||+|+||+|++      ||+|++|.
T Consensus       623 m~~L~~t~phfIRCIKPN~~k~~~~~~~~~~~~~~~~~~~~~~~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~  702 (767)
T cd01386         623 IDTLRRSGLHFVHCYLPQHNGGKAMARTASPSPQQSEDNGVAAEPLALDIPLLRSQLRGSQILEAARLHRLGFPISVPLG  702 (767)
T ss_pred             HHHHhccCCeeEEEeCccccccccccccccccccccccccccccccccCHHHHHHHHHhcccHHHHHHHhcCCcccccHH
Confidence            5679999999999999999874                      7899999999999999999997      99999999


Q ss_pred             HHHHHHhhhhh
Q psy8604          53 TVQRQLRYTGM   63 (70)
Q Consensus        53 ~F~~ry~~~~~   63 (70)
                      +|+.||+.|..
T Consensus       703 ~F~~RY~~L~~  713 (767)
T cd01386         703 EFVRRFGLLAE  713 (767)
T ss_pred             HHHHHHHhhCh
Confidence            99999998864

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the

>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins

Probab=99.86  E-value=9.6e-23  Score=151.50  Aligned_cols=63  Identities=24%  Similarity=0.414  Sum_probs=59.8

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++      ||+|++|.+|+.||+.+..
T Consensus       601 m~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvLE~vri~r~Gyp~R~~f~~F~~ry~~l~~  669 (717)
T cd01382         601 LEKLRSTGSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP  669 (717)
T ss_pred             HHHHhccCCeeeeeeCCCcccCCCCCChHHHHHHHHhcchHHHHHHHHccCchhhhHHHHHHHHHHhCC
Confidence            56799999999999999999999999999999999999999997      9999999999999997754

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of

>smart00242 MYSc Myosin

Probab=99.85  E-value=1.8e-22  Score=149.17  Aligned_cols=63  Identities=46%  Similarity=0.715  Sum_probs=60.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |+.|++|+||||||||||+.+.|+.||...|.+||+|+|++|++      ||+|++|++|+.||+.+.-
T Consensus       559 ~~~l~~t~~hfIRCIKPN~~k~~~~Fd~~~V~~QLr~~Gvle~iri~r~Gyp~r~~~~~F~~ry~~L~~  627 (677)
T smart00242      559 MDTLNSTNPHFIRCIKPNEEKKPGDFDSSLVLHQLRYLGVLETIRIRRAGFPYRLPFDEFLQRYRVLLP  627 (677)
T ss_pred             HHHHhccCCeEEEEeCCCcccCcccccHHHHHHHHHhcccHHHHHHHHccccceecHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999998865

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.

>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril

Probab=99.80  E-value=4.9e-21  Score=141.13  Aligned_cols=65  Identities=45%  Similarity=0.709  Sum_probs=54.9

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGMLK   65 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~~~   65 (70)
                      |+.|++|+||||||||||+.+.|+.||..+|.+||+++|++|++      ||.|++|.+|++||+.|.-..
T Consensus       580 ~~~L~~t~~hfIrCIkPN~~~~~~~FD~~~V~~QLr~~gile~vri~~~Gyp~r~~~~eF~~RY~~L~~~~  650 (689)
T PF00063_consen  580 MDTLRSTQPHFIRCIKPNDQKKPNQFDSKLVLRQLRYSGILETVRIRRQGYPVRLTFDEFLRRYKCLLPSS  650 (689)
T ss_dssp             HHHHCTSEEEEEEEE-SSSS--TT---HHHHHHHHHHTTHHHHHHHHHCSSSEEEEHHHHHHHHGGGSTTC
T ss_pred             HhhhhhcccceEEEeccccccccccccchheehhhhhhhhhhhhhhhhcccceecchhhhhhhhceechhh
Confidence            45789999999999999999999999999999999999999996      999999999999999987643

Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....

>KOG0161|consensus

Probab=99.76  E-value=2.5e-19  Score=142.14  Aligned_cols=62  Identities=34%  Similarity=0.605  Sum_probs=58.9

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTG   62 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~   62 (70)
                      |++|++|+|||||||.||..|.||.+|..+|+.||+|.||+|++      ||+|++|.+|.+||..+.
T Consensus       651 m~~l~~T~phFvRCiIPn~~K~~g~ld~~lvl~QLrcngVLEgIRicR~GfPnr~~~~eFrqRy~lla  718 (1930)
T KOG0161|consen  651 MTTLRSTHPHFVRCIIPNEEKKPGKLDAPLVLNQLRCNGVLEGIRICRQGFPNRMPFQEFRQRYELLA  718 (1930)
T ss_pred             HHHhccCCCceeEEeccCccccccccCHHHHHHHhhccCcHHHHHHHHhhCccccchHHHHHhHHhhh
Confidence            67899999999999999999999999999999999999999997      999999999999999443

>KOG0160|consensus

Probab=99.67  E-value=8.1e-18  Score=126.79  Aligned_cols=63  Identities=37%  Similarity=0.559  Sum_probs=60.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||..+.|..||..+|.+||+|+|+||++      ||.|.+|.+|+.||..+.-
T Consensus       556 m~~l~~t~phyircikPn~~~~p~~fe~~~v~~Qlr~~GvLetiRiS~~g~P~r~~~~Ef~~r~~~L~~  624 (862)
T KOG0160|consen  556 METLNSTPPHYIRCIKPNAEKKPQIFENNLVLQQLRCCGVLETIRISCAGFPTRWTFIEFVNRYGILMP  624 (862)
T ss_pred             HHHhcCCCCCCceeeCcchhcccccccccceeeeccccceehhheeccccCCccccHHHHHHHHhhcCc
Confidence            56899999999999999999999999999999999999999997      9999999999999998865

>KOG0162|consensus

Probab=99.66  E-value=1.6e-17  Score=123.85  Aligned_cols=61  Identities=28%  Similarity=0.506  Sum_probs=57.7

Q ss_pred             CCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhh
Q psy8604           2 NTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTG   62 (70)
Q Consensus         2 ~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~   62 (70)
                      ++|.+|.||||||||||++|.|+.||...|++|+.|+|+-|++      |.+|..|+.|++||.+|.
T Consensus       574 eTLmKc~P~YIR~IKPNeTK~pnD~ee~~V~HQveYLGLqENiRvRRAGfAYRr~F~kF~qRyails  640 (1106)
T KOG0162|consen  574 ETLMKCQPHYIRCIKPNETKSPNDWEESRVKHQVEYLGLQENIRVRRAGFAYRRAFDKFAQRYAILS  640 (1106)
T ss_pred             HHHHhcCcceeEeeCCCCCCCCccHHHHHHHHHHHhcchhhheeehhhhhHHHHHHHHHHHHheecC
Confidence            4688999999999999999999999999999999999999997      999999999999998764

>KOG0164|consensus

Probab=99.63  E-value=1.6e-16  Score=118.29  Aligned_cols=61  Identities=28%  Similarity=0.538  Sum_probs=57.9

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYT   61 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~   61 (70)
                      |++|.+.+|+||||||||+.|.|+.||..++..|.+++|++|++      |..|.+|+.|+.|||.+
T Consensus       573 v~nL~sKeP~YvRcikPNe~k~~~~fd~e~~~hqv~ylGLleNvrVrrAgfahRq~Y~~FL~RYKmi  639 (1001)
T KOG0164|consen  573 VKNLASKEPNYVRCIKPNEHKQPGQFDEERVRHQVRYLGLLENVRVRRAGFAHRQPYERFLLRYKMI  639 (1001)
T ss_pred             HHHHhhcCCCeEEeeccccccCccccchhhhHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHhh
Confidence            45788999999999999999999999999999999999999997      99999999999999975

>KOG0163|consensus

Probab=99.37  E-value=2.2e-13  Score=102.56  Aligned_cols=60  Identities=27%  Similarity=0.533  Sum_probs=54.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCcccc------CCCCCCCHHHHHHHHhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT------DIPNNFDIDTVQRQLRY   60 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~------~~p~r~~~~~F~~ry~~   60 (70)
                      |.+|++|..|||||||||....+..||...++.||+|+|+...      +||.|.+|.+...-|+-
T Consensus       654 ldKL~stGt~FiRCiKPN~kM~~~~FeGs~iLsQLqCsGm~SVL~LMq~GyPSR~~F~dLYamYkk  719 (1259)
T KOG0163|consen  654 LDKLESTGTHFIRCIKPNSKMIDRHFEGSAILSQLQCSGMISVLELMQHGYPSRTSFADLYAMYKK  719 (1259)
T ss_pred             HHHHHhcCCeeEEeecCccccccccccHHHHHHHhhhccHHHHHHHHhcCCCccccHHHHHHHHHh
Confidence            4578999999999999999999999999999999999997433      49999999999888864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	70
1w8j_A	766	Crystal Structure Of Myosin V Motor Domain - Nucleo		6e-06
1oe9_A	795	Crystal Structure Of Myosin V Motor With Essential		6e-06
2dfs_A	1080	3-D Structure Of Myosin-V Inhibited State Length =		8e-06
4a7f_C	697	Structure Of The Actin-Tropomyosin-Myosin Complex (		5e-04
1g8x_A	1010	Structure Of A Genetically Engineered Molecular Mot		5e-04
1lkx_A	697	Motor Domain Of Myoe, A Class-I Myosin Length = 697		5e-04
2x9h_A	695	Crystal Structure Of Myosin-2 Motor Domain In Compl		6e-04
3i5g_A	839	Crystal Structure Of Rigor-Like Squid Myosin S1 Len		6e-04
3mkd_A	692	Crystal Structure Of Myosin-2 Dictyostelium Discoid		6e-04
3myh_X	762	Insights Into The Importance Of Hydrogen Bonding In		6e-04
1jwy_A	776	Crystal Structure Of The Dynamin A Gtpase Domain Co		6e-04
2aka_A	776	Structure Of The Nucleotide-Free Myosin Ii Motor Do		6e-04
1w9k_A	770	Dictyostelium Discoideum Myosin Ii Motor Domain S45		6e-04
1yv3_A	762	The Structural Basis Of Blebbistatin Inhibition And		7e-04
2xo8_A	776	Crystal Structure Of Myosin-2 In Complex With Tribr		7e-04
3mnq_A	788	Crystal Structure Of Myosin-2 Motor Domain In Compl		7e-04
1w9l_A	770	Myosin Ii Dictyostelium Discoideum Motor Domain S45		7e-04
1fmv_A	761	Crystal Structure Of The Apo Motor Domain Of Dictyo		7e-04
1lvk_A	762	X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N		7e-04
1mma_A	762	X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga		7e-04
1d0x_A	761	Dictyostelium Myosin S1dc (Motor Domain Fragment) C		7e-04
2xel_A	776	Molecular Mechanism Of Pentachloropseudilin Mediate		7e-04
2jhr_A	788	Crystal Structure Of Myosin-2 Motor Domain In Compl		7e-04
1w9i_A	770	Myosin Ii Dictyostelium Discoideum Motor Domain S45		7e-04
1w9j_A	770	Myosin Ii Dictyostelium Discoideum Motor Domain S45		7e-04
1mmd_A	762	Truncated Head Of Myosin From Dictyostelium Discoid		7e-04
1mmn_A	762	X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga		7e-04
1mmg_A	762	X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga		7e-04

>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P ++RCIK N  K P  FD    ++QLR  G+L+T
Sbjct: 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLET 690

>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P ++RCIK N  K P  FD    ++QLR  G+L+T
Sbjct: 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLET 690

>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P ++RCIK N  K P  FD    ++QLR  G+L+T
Sbjct: 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLET 690

>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRY 60
           + TL   +P ++RCIKSN  K     D D V  Q+RY G+L+         +   R+  +
Sbjct: 574 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLE---------NVRVRRAGF 624
Query: 61  TGMLKTVRYY 70
            G ++  R+Y
Sbjct: 625 AGRIEYTRFY 634

>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTDIPNNFDIDTVQRQLRY 60
           + TL   +P ++RCIKSN  K     D D V  Q+RY G+L+         +   R+  +
Sbjct: 574 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLE---------NVRVRRAGF 624
Query: 61  TGMLKTVRYY 70
            G ++  R+Y
Sbjct: 625 AGRIEYTRFY 634

>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 641 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 682

>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M  L   +P F+RCI  N +K P   D   VL QLR  G+L+
Sbjct: 659 MKNLYSTHPHFVRCIIPNELKTPGLIDAALVLHQLRCNGVLE 700

>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 641 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 682

>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 653 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 694

>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 653 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 694

>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 641 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 682

>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 653 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 694

>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 641 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 682

>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 653 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 694

>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLK 42
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLE 683

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	70
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-16
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-16
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	5e-16
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	7e-16
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	8e-16
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	8e-16
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	8e-16
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	1e-15
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	4e-14
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	4e-14

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 70.5 bits (173), Expect = 2e-16
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P ++RCIK N  K P  FD    ++QLR  G+L+T
Sbjct: 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLET 690

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 70.2 bits (172), Expect = 2e-16
 Identities = 19/43 (44%), Positives = 22/43 (51%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL   NP F+RCI  N  K     D   VL QLR  G+L+ 
Sbjct: 670 MTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEG 712

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 69.3 bits (170), Expect = 5e-16
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+ 
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795

 Score = 68.8 bits (169), Expect = 7e-16
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P ++RCIK N  K P  FD    ++QLR  G+L+T
Sbjct: 648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLET 690

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 68.9 bits (169), Expect = 8e-16
 Identities = 18/43 (41%), Positives = 23/43 (53%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL+  NP F+RCI  N  K     +   VL QLR  G+L+ 
Sbjct: 637 MATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEG 679

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784

 Score = 68.8 bits (169), Expect = 8e-16
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           ++ L      FIRCIK N     ++F+   +L QL+ +GM+  
Sbjct: 651 LDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSV 693

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770

 Score = 68.4 bits (168), Expect = 8e-16
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+ 
Sbjct: 642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 684

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697

 Score = 68.0 bits (167), Expect = 1e-15
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           + TL   +P ++RCIKSN  K     D D V  Q+RY G+L+ 
Sbjct: 574 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLEN 616

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783

 Score = 63.8 bits (156), Expect = 4e-14
 Identities = 17/43 (39%), Positives = 22/43 (51%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M  L   +P F+RCI  N  K P   D   V+ QLR  G+L+ 
Sbjct: 659 MTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEG 701

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 63.9 bits (156), Expect = 4e-14
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M  L   +P F+RCI  N +K P   D + VL QL+  G+L+ 
Sbjct: 657 MKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEG 699

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	70
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	99.87
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	99.87
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	99.86
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	99.86
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	99.86
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	99.86
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	99.85
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	99.85
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	99.85
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	99.85
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	99.85

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=99.87  E-value=1e-23  Score=156.88  Aligned_cols=63  Identities=35%  Similarity=0.602  Sum_probs=60.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|+-
T Consensus       648 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~  716 (795)
T 1w7j_A          648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMK  716 (795)
T ss_dssp             HHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSC
T ss_pred             HHHHhcCCCeEEEEeCCCCcCChhhcCcccccchhhhCChHHHHHHHHcCCCccccHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999999999997      9999999999999999874

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=99.87  E-value=1.9e-23  Score=156.08  Aligned_cols=63  Identities=29%  Similarity=0.516  Sum_probs=58.6

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|+.
T Consensus       657 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~f~eF~~RY~~L~~  725 (837)
T 1kk8_A          657 MKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAP  725 (837)
T ss_dssp             HHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHHHHHGGGSG
T ss_pred             HHHHHccCCeeeeeeCCCccCCcccccchheeeeccccCccHHHHHHHHhccccccHHHHHHHHHHhcc
Confidence            56799999999999999999999999999999999999999997      9999999999999999864

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9

Probab=99.86  E-value=1e-23  Score=155.29  Aligned_cols=63  Identities=29%  Similarity=0.479  Sum_probs=60.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|.-
T Consensus       574 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~  642 (697)
T 1lkx_A          574 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCK  642 (697)
T ss_dssp             HHHHTTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHTSHHHHHHHHHSCSBCCBSHHHHTTSCSSSC
T ss_pred             HHHHHccCCcceEeecCCCcCCCCCcChhhccccCcccccHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence            56799999999999999999999999999999999999999997      9999999999999998864

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*

Probab=99.86  E-value=1.6e-23  Score=155.71  Aligned_cols=63  Identities=24%  Similarity=0.404  Sum_probs=59.9

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|..
T Consensus       651 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~  719 (784)
T 2v26_A          651 LDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP  719 (784)
T ss_dssp             HHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHTSCCSEEEEHHHHHHHHGGGCC
T ss_pred             HHHHHccCCeeEEEecCCcccccCccccccccccccccccHHHHHHHHhcCCccccHHHHHHHHhhcCC
Confidence            56789999999999999999999999999999999999999997      9999999999999998764

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*

Probab=99.86  E-value=9.9e-24  Score=156.82  Aligned_cols=63  Identities=32%  Similarity=0.533  Sum_probs=49.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|..
T Consensus       659 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~  727 (783)
T 4db1_A          659 MTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNP  727 (783)
T ss_dssp             HHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHHTSCCEEEEC------------
T ss_pred             HHHHHccCCEEEEeeCCCcccCCCcccchhhheeccccChHhheeehhcCCCccCcHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999998864

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=99.86  E-value=3.6e-23  Score=157.20  Aligned_cols=63  Identities=24%  Similarity=0.404  Sum_probs=59.9

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|..
T Consensus       655 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvLE~irI~r~Gyp~R~~f~eF~~RY~~L~~  723 (1052)
T 4anj_A          655 LDKLRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP  723 (1052)
T ss_dssp             HHHHHTSEEEEEEEECCCSSCCSSCCCHHHHHHHHHHHTHHHHHHHTTTCCCEEEEHHHHHHHHHTTSC
T ss_pred             HHHHcCcCCEEEEEECCCccCCCCcCCHHHHHHHHHHhhHHHHHHHHhcCCCCcCcHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999996      9999999999999998864

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=99.85  E-value=3e-23  Score=156.94  Aligned_cols=63  Identities=32%  Similarity=0.491  Sum_probs=60.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|+.
T Consensus       637 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~  705 (995)
T 2ycu_A          637 MATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTP  705 (995)
T ss_dssp             HHHHHTSEEEEEEEECCCSSCCTTCCCTTTHHHHHHHHTHHHHHHHHHHSCCEEEEHHHHHHHHGGGST
T ss_pred             HHHHHhcCcceeeeecCCccccccccCHHHHHHHhcccchHHHHHHHHhcCCccccHHHHHHHHHHhCc
Confidence            56789999999999999999999999999999999999999997      9999999999999999864

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=99.85  E-value=5.4e-23  Score=155.77  Aligned_cols=63  Identities=32%  Similarity=0.542  Sum_probs=60.2

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|+-
T Consensus       642 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~r~~~~~F~~RY~~L~~  710 (1010)
T 1g8x_A          642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP  710 (1010)
T ss_dssp             HHHHTTSEEEEEEEECSCSSCCTTCCCHHHHHHHHHHSSHHHHHHHHTTSCCEEEEHHHHHHHHGGGST
T ss_pred             HHHHHhcCCeeeeeecCCcccccCCcChhhcchhcccCccHHHHHHHHhCCcccccHHHHHHHHHHhCC
Confidence            56799999999999999999999999999999999999999997      9999999999999998863

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=99.85  E-value=3.9e-23  Score=157.23  Aligned_cols=63  Identities=35%  Similarity=0.602  Sum_probs=60.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++      ||+|++|.+|++||+.|+-
T Consensus       648 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~eF~~RY~~L~~  716 (1080)
T 2dfs_A          648 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMK  716 (1080)
T ss_dssp             HHHHHSSEEEEEEEECCCSSCCTTCCCHHHHHHHHHTTTHHHHHHHHTTSCCEEEEHHHHHHHHTTTSC
T ss_pred             HHHHHhcCCeeEEEecCCCCCCchhcCHHhhHHHHhhcccHHHHhHHhcCCCchhhHHHHHHHHHHHCC
Confidence            56789999999999999999999999999999999999999996      9999999999999999864

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...

Probab=99.85  E-value=1.2e-23  Score=156.24  Aligned_cols=63  Identities=32%  Similarity=0.542  Sum_probs=51.3

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.|.|+.||..+|++||+|+|++|++      ||+|++|.+|++||+.|.-
T Consensus       642 m~~L~~t~phfVRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~R~~f~eF~~RY~~L~~  710 (770)
T 1w9i_A          642 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP  710 (770)
T ss_dssp             HHHHHTSEEEEEEEECSCSSCCSSCCCHHHHHHHHHHSSHHHHHHHTTSSCCEEEESCC----------
T ss_pred             HHHHHhcCceeeeeecCCcccccCccCchhhHhHhcccchHHHHHHHHhcCcccccHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999999999999997      9999999999999998854

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=99.85  E-value=8.1e-23  Score=155.87  Aligned_cols=62  Identities=34%  Similarity=0.551  Sum_probs=59.5

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTG   62 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~   62 (70)
                      |++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++      ||+|++|.+|+.||+.|+
T Consensus       670 ~~~l~~t~phfvRCIkPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~~F~~ry~~L~  737 (1184)
T 1i84_S          670 MTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILA  737 (1184)
T ss_dssp             HHHHTTSEEEECCEECCCSSCCSSCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHTTTTC
T ss_pred             HHHHHhcCCCceeeeCCCCcCCCCcccHHHHHHHHhhcCchHHHHhHhhcCcccccHHHHHHHHHHhc
Confidence            56789999999999999999999999999999999999999997      999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	70
d1br2a2	710	c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick	1e-16
d1d0xa2	712	c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain	3e-16
d1lkxa_	684	c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli	4e-16
d1w7ja2	730	c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick	1e-14
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	3e-12
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	4e-12

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 69.8 bits (170), Expect = 1e-16
 Identities = 19/43 (44%), Positives = 22/43 (51%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL   NP F+RCI  N  K     D   VL QLR  G+L+ 
Sbjct: 592 MTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEG 634

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 68.6 bits (167), Expect = 3e-16
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TL   NP F+RCI  N  ++P   +   VL QLR  G+L+ 
Sbjct: 595 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEG 637

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

 Score = 68.6 bits (167), Expect = 4e-16
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           + TL   +P ++RCIKSN  K     D D V  Q+RY G+L+ 
Sbjct: 566 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLEN 608

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

 Score = 64.0 bits (155), Expect = 1e-14
 Identities = 20/43 (46%), Positives = 26/43 (60%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M TLN   P ++RCIK N  K P  FD    ++QLR  G+L+T
Sbjct: 586 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLET 628

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 57.4 bits (138), Expect = 3e-12
 Identities = 17/43 (39%), Positives = 23/43 (53%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M  L   +P F+RCI  N  K P   + + VL QLR  G+L+ 
Sbjct: 612 MANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEG 654

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 57.0 bits (137), Expect = 4e-12
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 1   MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKT 43
           M  L   +P F+RCI  N +K P   D + VL QL+  G+L+ 
Sbjct: 609 MKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEG 651

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	70
d1d0xa2	712	Myosin S1, motor domain {Dictyostelium discoideum	99.86
d1br2a2	710	Myosin S1, motor domain {Chicken (Gallus gallus),	99.85
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	99.85
d1lkxa_	684	Myosin S1, motor domain {Dictyostelium discoideum,	99.84
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	99.84
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	99.84

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.86  E-value=1.4e-23  Score=152.87  Aligned_cols=63  Identities=32%  Similarity=0.542  Sum_probs=59.6

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++      ||.|++|++|++||+.|.-
T Consensus       595 m~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlE~irirr~Gyp~R~~~~eF~~RY~~L~~  663 (712)
T d1d0xa2         595 MATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAP  663 (712)
T ss_dssp             HHHHHTSEEEEEEEECSSTTCCTTCCCHHHHHHHHHHTSHHHHHHHHHTSCCEEEEHHHHHHHHGGGST
T ss_pred             HHHHcCCCCEEEEEeCcCCCCCccccCHHHHHHHHHHhChHHHHHHHhCCCCccccHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999999999999996      9999999999999998853

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.85  E-value=2.2e-23  Score=151.51  Aligned_cols=64  Identities=33%  Similarity=0.515  Sum_probs=60.4

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGML   64 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~~   64 (70)
                      |++|++|+||||||||||+.+.|+.||...|.+||+|+|++|++      ||+|++|.+|++||+.|+..
T Consensus       592 ~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr~~Gvle~vri~r~Gyp~R~~~~eF~~RY~~L~~~  661 (710)
T d1br2a2         592 MTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAAN  661 (710)
T ss_dssp             HHHHHTSEEEEEEEECCCSSCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGGTT
T ss_pred             HHHHhCCCCeEEEEeCcCCCCCCCCCCHHHHHHHHHHhCHHHHHHHHhcCCCccccHHHHHHHHHHhCcc
Confidence            45789999999999999999999999999999999999999997      99999999999999998754

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=99.85  E-value=2.9e-23  Score=151.09  Aligned_cols=63  Identities=35%  Similarity=0.602  Sum_probs=59.6

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||...|.+||+|+||+|++      ||.|++|.+|++||+.+.-
T Consensus       586 ~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlE~vrir~~Gyp~R~~f~eF~~RY~~L~~  654 (730)
T d1w7ja2         586 METLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMK  654 (730)
T ss_dssp             HHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHTTHHHHHHHHHHSCCEEEEHHHHHHHHGGGSC
T ss_pred             HHHHhCCCCeEEEEECCCCccCCCCcCHHHHHHHHHHhcHHHHHHHHhcCCCccccHHHHHHHHHHHCC
Confidence            45788999999999999999999999999999999999999997      9999999999999998854

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

Probab=99.84  E-value=4.6e-23  Score=149.46  Aligned_cols=63  Identities=29%  Similarity=0.479  Sum_probs=59.6

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||...|.+||+|+|++|++      ||.|++|++|+.||+.|..
T Consensus       566 ~~~L~~t~~hfIrCIkPN~~k~p~~fd~~~V~~QLr~~gvle~vri~~~Gyp~r~~~~eF~~ry~~L~~  634 (684)
T d1lkxa_         566 ITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCK  634 (684)
T ss_dssp             HHHHTTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHTSHHHHHHHHHSCSBCCBSHHHHTTSCSSSC
T ss_pred             HHHHhCCCCEEEEEECcCCcCCCCCCCHHHHHHHHHHhcHHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence            45789999999999999999999999999999999999999996      9999999999999998763

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.84  E-value=1.1e-22  Score=149.21  Aligned_cols=63  Identities=29%  Similarity=0.516  Sum_probs=58.1

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||...|.+||+|+|++|++      ||+|++|++|++||+.+..
T Consensus       609 ~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~Gvle~vrirr~Gyp~R~~f~eF~~ry~~L~~  677 (789)
T d1kk8a2         609 MKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAP  677 (789)
T ss_dssp             HHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHHHHHGGGSG
T ss_pred             HHHHhcCCCeEEEecCCccccCCcccCHHHHHHHHHhhchHHHHHHHHcCCCccccHHHHHHHHHHhCc
Confidence            45789999999999999999999999999999999999999997      9999999999999998864

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.84  E-value=9.7e-23  Score=149.61  Aligned_cols=63  Identities=30%  Similarity=0.547  Sum_probs=59.6

Q ss_pred             CCCCCCCCCceeeeecCCCCCCCCCccHHHHHHHHHHhCccccC------CCCCCCHHHHHHHHhhhhh
Q psy8604           1 MNTLNQANPFFIRCIKSNTMKIPNNFDIDTVLRQLRYTGMLKTD------IPNNFDIDTVQRQLRYTGM   63 (70)
Q Consensus         1 m~~L~~t~~hfIrCIkPN~~k~p~~fd~~~v~~Ql~~~g~le~~------~p~r~~~~~F~~ry~~~~~   63 (70)
                      |++|++|+||||||||||+.+.|+.||..+|.+||+|+|++|++      ||+|++|.+|++||+.|..
T Consensus       612 ~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~Gyp~R~~~~eF~~RY~~L~~  680 (794)
T d2mysa2         612 MANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNA  680 (794)
T ss_dssp             HHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTTSCCCEEEHHHHHHHHGGGTT
T ss_pred             HHHHhcCCCeEEEeecCCcccCCcccchHHHHHHHHhcCHHHHHHHHhcCCCccccHHHHHHHHHHhCc
Confidence            45788999999999999999999999999999999999999996      9999999999999998854