Psyllid ID: psy8678

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MVLLPAPPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADVS
cccccccccccccccEEEcccEEEccccccccccccccccEEEEcccEEEccEEccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccEEEEcHHHHHHHHHHHcccccccccccEEEcccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccEEEEEEcccccccccccccccccEEEEccc
cccccccccccccccEEEcccEEEEcccccccccccccccEEEEEccEEEccccccHHHHHHHHHHcccEEEEEccccHHHccccccHHcccccHccccccccccccccEEEcccccccccccHHHHHHHcccccccccccHHHHHHHcccccccEcccccccccccccccccccccccEEEEEHHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccEcccccHHHHHHccccccccccccccccccccccccEEcccccccccHHHHcccHHHccccccccccccccEEEEcccccccccccEcccccccccccHEEEEEHHHcccccccccccccccEcccccc
mvllpappverykdmvllpgdtfrmgtnkpilikdgefpsrnvtldafyldqhevsntqFQEFvsatgyvteaekfgdtfvfepllseEERAKISQVRHDMKrfegldstiehrmhhpvvhiswNDAVAYCTwrgarlpteaeweygcrgglenrlfpwgswlhpegidstiehrmnhpvvhvswNDAVAYCTwrgarlpteaeweygcrgglenrlfpwgnnltprgehranvwqgefptnntaadgylstapvmsykenkfgLYNMVGNVWEWTADwwnvhhhpapsynpkgpttgtdkvkkggsylcneqycyrhrcaarsqntpdssagnlgfrcaadkgpttgtdkvkkggsylcneqycyrhrcaarsqntpdssagnlgfrcaadvs
mvllpappveryKDMVLLPGDTFRMGTNKPilikdgefpsRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHpapsynpkgptTGTDKVKKGGSYLCNEQYCYRHRCAARsqntpdssagnlGFRCaadkgpttgtdkvkkggsYLCNEQYCYRHRCAARSqntpdssagnlgfrcaadvs
MVLLPAPPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADVS
***********YKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLS**************KRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHH*******************GGSYLCNEQYCYRHRCAA******************************KKGGSYLCNEQYCYRHRCA***********************
***LPA*PVERYKDMVLLPGDTFRMGT*************RNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAAD********************QYCYRH****************LGFRCAAD**
MVLLPAPPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAA*********AGNLGFRCAADKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADVS
*****APPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARS**************C*****
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MVLLPAPPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
Q0P5L5374 Sulfatase-modifying facto yes N/A 0.736 0.775 0.549 1e-106
Q8NBK3374 Sulfatase-modifying facto yes N/A 0.741 0.780 0.554 1e-105
Q8R0F3372 Sulfatase-modifying facto yes N/A 0.718 0.760 0.558 1e-105
Q58CP2301 Sulfatase-modifying facto no N/A 0.680 0.890 0.393 3e-55
Q5RCR5301 Sulfatase-modifying facto no N/A 0.677 0.887 0.388 4e-55
Q8NBJ7301 Sulfatase-modifying facto no N/A 0.677 0.887 0.385 1e-54
Q8BPG6308 Sulfatase-modifying facto no N/A 0.664 0.850 0.393 6e-54
Q822R1618 Serine/threonine-protein yes N/A 0.368 0.234 0.377 1e-23
Q9PKP3614 Serine/threonine-protein yes N/A 0.373 0.239 0.360 5e-23
Q7AJA5619 Serine/threonine-protein yes N/A 0.373 0.237 0.366 2e-22
>sp|Q0P5L5|SUMF1_BOVIN Sulfatase-modifying factor 1 OS=Bos taurus GN=SUMF1 PE=2 SV=1 Back     alignment and function desciption
 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/344 (54%), Positives = 232/344 (67%), Gaps = 54/344 (15%)

Query: 5   PAPPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFV 64
           P+PP +    MV +P   F MGT+ P + +DGE P+R V +DAFY+D +EVSN +F++FV
Sbjct: 85  PSPPTK----MVPIPAGVFTMGTDDPQIKQDGEAPARRVAIDAFYMDAYEVSNAEFEKFV 140

Query: 65  SATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISW 124
           ++TGY+TEAEKFGD+FVFE +LSE+ ++ I Q                            
Sbjct: 141 NSTGYLTEAEKFGDSFVFEGMLSEQVKSDIQQ---------------------------- 172

Query: 125 NDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVS 184
             AVA   W    LP +                   +W HPEG DST+ HR +HPV+HVS
Sbjct: 173 --AVAAAPWW---LPVKG-----------------ANWRHPEGPDSTVLHRPDHPVLHVS 210

Query: 185 WNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNT 244
           WNDAVAYCTW G RLPTEAEWEY CRGGL+NRLFPWGN L P+G+H AN+WQGEFP  NT
Sbjct: 211 WNDAVAYCTWAGKRLPTEAEWEYSCRGGLQNRLFPWGNKLQPKGQHYANIWQGEFPVTNT 270

Query: 245 AADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKK 304
             DG+  TAPV ++  N +GLYN+VGN WEWT+DWW VHH    + NPKGP +G D+VKK
Sbjct: 271 GEDGFRGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSAEETINPKGPPSGKDRVKK 330

Query: 305 GGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPTTG 348
           GGSY+C++ YCYR+RCAARSQNTPDSSA NLGFRCAAD  PTTG
Sbjct: 331 GGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCAADHLPTTG 374
Using molecular oxygen and an unidentified reducing agent, oxidizes a cysteine residue in the substrate sulfatase to an active site 3-oxoalanine residue, which is also called C(alpha)-formylglycine. Known substrates include GALNS, ARSA, STS and ARSE.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 8EC: .EC: 9EC: 9EC: .EC: -
>sp|Q8NBK3|SUMF1_HUMAN Sulfatase-modifying factor 1 OS=Homo sapiens GN=SUMF1 PE=1 SV=3 Back     alignment and function description
>sp|Q8R0F3|SUMF1_MOUSE Sulfatase-modifying factor 1 OS=Mus musculus GN=Sumf1 PE=1 SV=2 Back     alignment and function description
>sp|Q58CP2|SUMF2_BOVIN Sulfatase-modifying factor 2 OS=Bos taurus GN=SUMF2 PE=2 SV=1 Back     alignment and function description
>sp|Q5RCR5|SUMF2_PONAB Sulfatase-modifying factor 2 OS=Pongo abelii GN=SUMF2 PE=2 SV=1 Back     alignment and function description
>sp|Q8NBJ7|SUMF2_HUMAN Sulfatase-modifying factor 2 OS=Homo sapiens GN=SUMF2 PE=1 SV=2 Back     alignment and function description
>sp|Q8BPG6|SUMF2_MOUSE Sulfatase-modifying factor 2 OS=Mus musculus GN=Sumf2 PE=2 SV=2 Back     alignment and function description
>sp|Q822R1|PKN1_CHLCV Serine/threonine-protein kinase pkn1 OS=Chlamydophila caviae (strain GPIC) GN=pkn1 PE=3 SV=1 Back     alignment and function description
>sp|Q9PKP3|PKN1_CHLMU Serine/threonine-protein kinase pkn1 OS=Chlamydia muridarum (strain MoPn / Nigg) GN=pkn1 PE=3 SV=1 Back     alignment and function description
>sp|Q7AJA5|PKN1_CHLPN Serine/threonine-protein kinase pkn1 OS=Chlamydia pneumoniae GN=pkn1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
449474288284 PREDICTED: LOW QUALITY PROTEIN: sulfatas 0.713 0.989 0.592 1e-108
355722650374 sulfatase modifying factor 1 [Mustela pu 0.720 0.759 0.559 1e-105
73985046374 PREDICTED: sulfatase-modifying factor 1 0.720 0.759 0.562 1e-105
449270327284 Sulfatase-modifying factor 1 [Columba li 0.713 0.989 0.574 1e-105
115497162374 sulfatase-modifying factor 1 precursor [ 0.736 0.775 0.549 1e-104
344276480374 PREDICTED: sulfatase-modifying factor 1 0.720 0.759 0.559 1e-104
426339251383 PREDICTED: LOW QUALITY PROTEIN: sulfatas 0.741 0.762 0.554 1e-104
363738801353 PREDICTED: sulfatase-modifying factor 1- 0.713 0.796 0.564 1e-104
297670799374 PREDICTED: sulfatase-modifying factor 1 0.741 0.780 0.552 1e-104
157821111372 sulfatase-modifying factor 1 precursor [ 0.748 0.793 0.550 1e-104
>gi|449474288|ref|XP_004174968.1| PREDICTED: LOW QUALITY PROTEIN: sulfatase-modifying factor 1 [Taeniopygia guttata] Back     alignment and taxonomy information
 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/331 (59%), Positives = 229/331 (69%), Gaps = 50/331 (15%)

Query: 15  MVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAE 74
           MVL+PG  F MGT +P + +DGE P+R V L +F++DQ+EVSN  FQ FV+ATGYVTEAE
Sbjct: 1   MVLIPGGVFTMGTQEPEIQQDGEGPARRVHLSSFHMDQYEVSNQDFQSFVNATGYVTEAE 60

Query: 75  KFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWR 134
           KFGD+FVFE +LSE  +A I Q                              AVA   W 
Sbjct: 61  KFGDSFVFEGMLSEAVKADIHQ------------------------------AVAAAPWW 90

Query: 135 GARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTW 194
              LP +                   SW HPEG DS+I  RM+HPV+HVSWNDAVA+CTW
Sbjct: 91  ---LPVKG-----------------ASWRHPEGPDSSISSRMDHPVLHVSWNDAVAFCTW 130

Query: 195 RGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAP 254
            G RLPTEAEWEY CRGGLENRLFPWGN L P+G+H AN+WQGEFPTNNTA DGY  TAP
Sbjct: 131 AGKRLPTEAEWEYSCRGGLENRLFPWGNKLQPKGQHYANIWQGEFPTNNTAEDGYKGTAP 190

Query: 255 VMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQY 314
           V ++  N +GLYNMVGN WEWT+DWW VHH P   +NPKGP++GTD+VKKGGSY+C++ Y
Sbjct: 191 VSAFPPNAYGLYNMVGNAWEWTSDWWAVHHSPQELHNPKGPSSGTDRVKKGGSYMCHKSY 250

Query: 315 CYRHRCAARSQNTPDSSAGNLGFRCAADKGP 345
           CYR+RCAARSQNTPDSSA NLGFRCAAD  P
Sbjct: 251 CYRYRCAARSQNTPDSSASNLGFRCAADSAP 281

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota
>gi|355722650|gb|AES07642.1| sulfatase modifying factor 1 [Mustela putorius furo] Back     alignment and taxonomy information
>gi|73985046|ref|XP_541796.2| PREDICTED: sulfatase-modifying factor 1 [Canis lupus familiaris] Back     alignment and taxonomy information
>gi|449270327|gb|EMC81015.1| Sulfatase-modifying factor 1 [Columba livia] Back     alignment and taxonomy information
>gi|115497162|ref|NP_001069544.1| sulfatase-modifying factor 1 precursor [Bos taurus] gi|122144266|sp|Q0P5L5.1|SUMF1_BOVIN RecName: Full=Sulfatase-modifying factor 1; AltName: Full=C-alpha-formylglycine-generating enzyme 1; Flags: Precursor gi|112361989|gb|AAI19886.1| Sulfatase modifying factor 1 [Bos taurus] gi|296474978|tpg|DAA17093.1| TPA: sulfatase modifying factor 1 precursor [Bos taurus] Back     alignment and taxonomy information
>gi|344276480|ref|XP_003410036.1| PREDICTED: sulfatase-modifying factor 1 [Loxodonta africana] Back     alignment and taxonomy information
>gi|426339251|ref|XP_004033571.1| PREDICTED: LOW QUALITY PROTEIN: sulfatase-modifying factor 1 [Gorilla gorilla gorilla] Back     alignment and taxonomy information
>gi|363738801|ref|XP_003642070.1| PREDICTED: sulfatase-modifying factor 1-like [Gallus gallus] Back     alignment and taxonomy information
>gi|297670799|ref|XP_002813542.1| PREDICTED: sulfatase-modifying factor 1 isoform 1 [Pongo abelii] Back     alignment and taxonomy information
>gi|157821111|ref|NP_001102109.1| sulfatase-modifying factor 1 precursor [Rattus norvegicus] gi|149036859|gb|EDL91477.1| sulfatase modifying factor 1 (predicted) [Rattus norvegicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
UNIPROTKB|F1P978374 SUMF1 "Uncharacterized protein 0.477 0.502 0.718 3.6e-82
MGI|MGI:1889844372 Sumf1 "sulfatase modifying fac 0.472 0.5 0.720 1.2e-81
UNIPROTKB|Q0P5L5374 SUMF1 "Sulfatase-modifying fac 0.477 0.502 0.712 2e-81
RGD|1309939372 Sumf1 "sulfatase modifying fac 0.469 0.497 0.724 5.2e-81
UNIPROTKB|F1SFL4376 SUMF1 "Uncharacterized protein 0.477 0.5 0.7 2.2e-80
UNIPROTKB|Q8NBK3374 SUMF1 "Sulfatase-modifying fac 0.472 0.497 0.715 2.9e-80
ZFIN|ZDB-GENE-060421-3113388 sumf1 "sulfatase modifying fac 0.477 0.484 0.680 8.7e-79
UNIPROTKB|E1C234284 LOC100859261 "Uncharacterized 0.469 0.651 0.691 3.1e-76
FB|FBgn0035102336 CG7049 [Drosophila melanogaste 0.431 0.505 0.627 8.8e-63
UNIPROTKB|P95060299 MT0739 "Conserved protein" [My 0.477 0.628 0.462 2.9e-56
UNIPROTKB|F1P978 SUMF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 135/188 (71%), Positives = 157/188 (83%)

Query:   161 SWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPW 220
             +W HPEG DST  HR +HPV+HVSWNDAVAYCTW G RLPTEAEWEY CRGGL+NRLFPW
Sbjct:   187 NWRHPEGPDSTTLHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLQNRLFPW 246

Query:   221 GNNLTPRGEHRANVWQGEFPTNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWW 280
             GN L P+G+H AN+WQGEFP  NT  DG+  TAPV ++  N +GLYN+VGNVWEWT+DWW
Sbjct:   247 GNKLQPKGQHYANIWQGEFPVTNTGEDGFRGTAPVDAFPPNGYGLYNIVGNVWEWTSDWW 306

Query:   281 NVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCA 340
              VHH    ++NPKGP +G D+VKKGGSY+C++ YCYR+RCAARSQNTPDSSA NLGFRCA
Sbjct:   307 TVHHSVEKTHNPKGPPSGKDRVKKGGSYMCHKSYCYRYRCAARSQNTPDSSASNLGFRCA 366

Query:   341 ADKGPTTG 348
             AD+ PTTG
Sbjct:   367 ADRQPTTG 374
GO:0042803 "protein homodimerization activity" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=IEA
MGI|MGI:1889844 Sumf1 "sulfatase modifying factor 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q0P5L5 SUMF1 "Sulfatase-modifying factor 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1309939 Sumf1 "sulfatase modifying factor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFL4 SUMF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NBK3 SUMF1 "Sulfatase-modifying factor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060421-3113 sumf1 "sulfatase modifying factor 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C234 LOC100859261 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
FB|FBgn0035102 CG7049 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P95060 MT0739 "Conserved protein" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8R0F3SUMF1_MOUSE1, ., 8, ., 9, 9, ., -0.55850.71820.7607yesN/A
Q8NBK3SUMF1_HUMAN1, ., 8, ., 9, 9, ., -0.55490.74110.7807yesN/A
Q0P5L5SUMF1_BOVIN1, ., 8, ., 9, 9, ., -0.54940.73600.7754yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.8.99LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
pfam03781259 pfam03781, FGE-sulfatase, Formylglycine-generating 3e-58
COG1262314 COG1262, COG1262, Uncharacterized conserved protei 1e-43
TIGR03529344 TIGR03529, GldK_short, gliding motility-associated 5e-31
TIGR03525449 TIGR03525, GldK, gliding motility-associated lipop 4e-25
TIGR03440406 TIGR03440, egtB_TIGR03440, ergothioneine biosynthe 6e-24
TIGR03524559 TIGR03524, GldJ, gliding motility-associated lipop 7e-20
TIGR03530402 TIGR03530, GldJ_short, gliding motility-associated 2e-15
TIGR04344442 TIGR04344, ovoA_Nterm, 5-histidylcysteine sulfoxid 3e-12
TIGR03525449 TIGR03525, GldK, gliding motility-associated lipop 8e-11
TIGR03525449 TIGR03525, GldK, gliding motility-associated lipop 8e-06
TIGR02171 912 TIGR02171, Fb_sc_TIGR02171, Fibrobacter succinogen 4e-05
>gnl|CDD|217725 pfam03781, FGE-sulfatase, Formylglycine-generating sulfatase enzyme Back     alignment and domain information 
 Score =  190 bits (483), Expect = 3e-58
 Identities = 84/190 (44%), Positives = 107/190 (56%), Gaps = 15/190 (7%)

Query: 162 WLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCTWRGA------RLPTEAEWEYGCRGGLEN 215
           W HP G  S I+   +HPV  VSW DAVAY  W G       RLPTEAEWEY  RGG + 
Sbjct: 75  WRHPSGGLSDIDDGADHPVTGVSWYDAVAYARWLGKRTGNGYRLPTEAEWEYAARGGSKG 134

Query: 216 RLFPWGNNLTPRGEHRANVWQG-EFPTNNTAADGY-LSTAPVMSYKENKFGLYNMVGNVW 273
           R +PWG+ L P G    N+WQG +FP  +  AD +   T+PV S+  N  GLY+M GNVW
Sbjct: 135 RRYPWGDELYPAG----NIWQGADFPNEHAGADSFNGRTSPVGSFPPNALGLYDMAGNVW 190

Query: 274 EWTADWWNVHHHPAPSYNPKGPTTGTD-KVKKGGSYLCNEQYCYRHRCAAR-SQNTPDSS 331
           EWT+DW+  H+  AP         G   +V +GGS+ C+     R R A R +  TP + 
Sbjct: 191 EWTSDWYKPHYSFAPYDELSRDNFGGGYRVVRGGSWACSVY-PSRLRPAFRGNCQTPGTR 249

Query: 332 AGNLGFRCAA 341
           A ++GFR   
Sbjct: 250 ADDVGFRLVR 259

This domain is found in eukaryotic proteins required for post-translational sulphatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulphatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localised to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesised sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilised by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. Length = 259
>gnl|CDD|224182 COG1262, COG1262, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>gnl|CDD|234246 TIGR03529, GldK_short, gliding motility-associated lipoprotein GldK Back     alignment and domain information
>gnl|CDD|132564 TIGR03525, GldK, gliding motility-associated lipoprotein GldK Back     alignment and domain information
>gnl|CDD|234211 TIGR03440, egtB_TIGR03440, ergothioneine biosynthesis protein EgtB Back     alignment and domain information
>gnl|CDD|132563 TIGR03524, GldJ, gliding motility-associated lipoprotein GldJ Back     alignment and domain information
>gnl|CDD|132569 TIGR03530, GldJ_short, gliding motility-associated lipoprotein GldJ Back     alignment and domain information
>gnl|CDD|234555 TIGR04344, ovoA_Nterm, 5-histidylcysteine sulfoxide synthase Back     alignment and domain information
>gnl|CDD|132564 TIGR03525, GldK, gliding motility-associated lipoprotein GldK Back     alignment and domain information
>gnl|CDD|132564 TIGR03525, GldK, gliding motility-associated lipoprotein GldK Back     alignment and domain information
>gnl|CDD|233760 TIGR02171, Fb_sc_TIGR02171, Fibrobacter succinogenes paralogous family TIGR02171 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
TIGR03524559 GldJ gliding motility-associated lipoprotein GldJ. 100.0
TIGR03530402 GldJ_short gliding motility-associated lipoprotein 100.0
TIGR03529344 GldK_short gliding motility-associated lipoprotein 100.0
TIGR03525449 GldK gliding motility-associated lipoprotein GldK. 100.0
PF03781260 FGE-sulfatase: Sulfatase-modifying factor enzyme 1 100.0
TIGR03440406 unchr_TIGR03440 conserved hypothetical protein TIG 100.0
TIGR02171 912 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou 100.0
COG1262314 Uncharacterized conserved protein [Function unknow 100.0
TIGR03525449 GldK gliding motility-associated lipoprotein GldK. 99.1
TIGR02171 912 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou 98.96
TIGR03529344 GldK_short gliding motility-associated lipoprotein 98.67
PF03781260 FGE-sulfatase: Sulfatase-modifying factor enzyme 1 98.42
PHA00653381 mtd major tropism determinant 98.28
TIGR03440406 unchr_TIGR03440 conserved hypothetical protein TIG 98.14
COG1262314 Uncharacterized conserved protein [Function unknow 98.03
TIGR03524559 GldJ gliding motility-associated lipoprotein GldJ. 97.29
TIGR03530402 GldJ_short gliding motility-associated lipoprotein 97.21
>TIGR03524 GldJ gliding motility-associated lipoprotein GldJ Back     alignment and domain information 
Probab=100.00  E-value=8.6e-66  Score=508.10  Aligned_cols=360  Identities=28%  Similarity=0.392  Sum_probs=240.5

Q ss_pred             CCCCCcEEeCCeeeEccCCCCCCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcch---hh-------hcCCc
Q psy8678          10 ERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTE---AE-------KFGDT   79 (394)
Q Consensus        10 ~~~~~mv~IpgG~f~mG~~~~~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~---~~-------~~~~~   79 (394)
                      +..++||.||||+|.||+.+++++.+++.++|+|+|++|+|++|||||+||++||+++++...   ++       .++++
T Consensus        56 ~~~p~MV~IPGG~F~MGs~~dd~~~d~en~phqV~V~~F~IdktpVTNaEYlaFVeat~~~~~~~ea~~~~i~~~~lPdt  135 (559)
T TIGR03524        56 EAPPGLVFVEGGTFTMGQVQDDVMHDWNNTPTQQHVQSFYMDETEVTNSMYLEYLQYLKDVFPPSEANYKNIYSGALPDT  135 (559)
T ss_pred             CCCCceEEECCcEEEeCCCCCccccccCCCceEEEECCeEEECceecHHHHHHHHHHhccCCCccccccccceecccCCc
Confidence            457899999999999999888888889999999999999999999999999999999975432   11       34566


Q ss_pred             ccccCCccHHHHHhhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCcc------
Q psy8678          80 FVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLE------  153 (394)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~------  153 (394)
                      .+|+..++.+......+++|+.            +.+||||||||+||.+||.|+++++++.++.+.+......      
T Consensus       136 ~vWr~~~~~ne~~~~~y~rhP~------------y~~yPVVgVSW~qA~AYc~Wrt~~~ne~~~~~~g~~~~~~~~~~~~  203 (559)
T TIGR03524       136 LVWRNRLGNNETMTENYLRHPA------------YADYPVVGVSWIQAVEFSKWRTNRVNEKVLEDKGNIKKGAKIDVTA  203 (559)
T ss_pred             eeeecccCcccccccccccCCc------------ccCCCEeeeCHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc
Confidence            6666655544444344443332            5689999999999999999999999998776433221000      


Q ss_pred             CccCCCCCccc-c----CCcCCccccc---cCCC---cccCCHHHHHHHHHH------cCCCCCCHHHHHHHHhcCCCC-
Q psy8678         154 NRLFPWGSWLH-P----EGIDSTIEHR---MNHP---VVHVSWNDAVAYCTW------RGARLPTEAEWEYGCRGGLEN-  215 (394)
Q Consensus       154 ~~~~~~~~w~~-~----~~~~~~~~~~---~~~P---v~~Vsw~dA~~yc~w------lg~RLPTEaEWEyAArg~~~~-  215 (394)
                      ...|+...++. |    .|......+.   ...+   ...+.=..+..||+.      .+|||||||||||||||+... 
T Consensus       204 ~~~f~t~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~YRLPTEAEWEYAARGG~~~~  283 (559)
T TIGR03524       204 SSFFDTDVYLVDPSKTYGGDTTVYKRGIGRTRRKKGEARPAVPEEKDAYQQRKDGIITQRYRLPTEAEWEYAAKANVGNR  283 (559)
T ss_pred             ccccchhhhhcCccccccccchhhcccccccccccccccccccchhhhhhhhcccccccCCCCCCHHHHHHHHhCCCCCc
Confidence            01122111111 1    0111000000   0000   112333456677776      368999999999999998654 


Q ss_pred             --------ccccCCCCCCC------CCccccccccCCCCCC---CCCCCCCCccccCcCCCCCcccccccccCHHHhccc
Q psy8678         216 --------RLFPWGNNLTP------RGEHRANVWQGEFPTN---NTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTAD  278 (394)
Q Consensus       216 --------~~ypwg~~~~~------~~~~~an~~~~~~~~~---~~~~~g~~~~~pVg~~~~n~~GlyDM~GNV~EW~~d  278 (394)
                              ..||||+...+      .++.+||+|++.++..   ....||+..|+|||+|+||+||||||+|||||||.|
T Consensus       284 ~~n~~~~~~~YPWG~~~~~~~~~~~~g~~~ANf~~g~g~y~~~ag~~~DG~~~TapVgsf~pN~~GLYDM~GNV~EW~~D  363 (559)
T TIGR03524       284 EYNNYRGRKKYPWNGKYTRSKNRRNRGDQLANFKQGKGDYGGIAGWSDDGADITNEIKSYPPNDFGLYDMAGNVAEWVAD  363 (559)
T ss_pred             cccccccccccCCCCccCccccccccccceeeeccccCCccccccccccCCcccccccccCCCCCceeecCCchhhhccc
Confidence                    57999987643      4567899999987654   345788899999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCeEEeCccccCCcc---ccccc--------------eeccccCC---------------
Q psy8678         279 WWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQ---YCYRH--------------RCAARSQN---------------  326 (394)
Q Consensus       279 ~y~~~~~~~~~~~~~~~~~g~~~v~rGGs~~~~~~---~~~~~--------------r~~~r~~~---------------  326 (394)
                      +|++....+.         ......|||+|.....   ....+              +..+|...               
T Consensus       364 ~y~p~~~~~~---------~d~~~~rG~~~~~~~~~~~g~~~~~~~~~~~ydtl~ng~~~~~~~pg~~~~~~~~~~~~~~  434 (559)
T TIGR03524       364 VYRPIIDNEA---------NDFNYYRGNLYTKNMIDSDGNVVFAGTQEIEYDTLPNGKVVARYLPGEIAQVPVDKNETYL  434 (559)
T ss_pred             ccccccccCc---------ccceeEecCcccccccCCCCceEEecccceeeeeccCCceeeccCCCceeeeecCccchhh
Confidence            9998654321         1234455555542100   00000              00000000               


Q ss_pred             -CCCCCCCCCCcc----------------------------------------cccc-------CCCCCCCcccccCCcc
Q psy8678         327 -TPDSSAGNLGFR----------------------------------------CAAD-------KGPTTGTDKVKKGGSY  358 (394)
Q Consensus       327 -~~~~~~~~iGFR----------------------------------------~v~~-------~~~~~~~~~~~~ggsw  358 (394)
                       .-....+++.||                                        +++.       ..+..+..||+|||||
T Consensus       435 r~~~~~~d~~~~~dgd~~ss~~~~~~~~~~~~~~~~~my~~p~~~~~~~~~g~~~~~~d~~~~rttli~d~~RVlRGGSW  514 (559)
T TIGR03524       435 RTNFSKSDNANIRDGDKQSSRYYEFGDDEDEIARRPSMYNSPKSPIEIDPVGGMIVLYDDDKKRTTLIDDRVRVYKGGSW  514 (559)
T ss_pred             hhcccccccccccccccccchhhccccccccccccchhccCcccccccccccceeeecccccCceeeecCCeEEeecCCc
Confidence             000011122222                                        1211       1234477899999999


Q ss_pred             ccCCCccccccccccCCCCCCCCCCCcceEEEeec
Q psy8678         359 LCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADV  393 (394)
Q Consensus       359 ~~~~~~~~~~~~~~r~~~~~~~~~~~~gfr~~~~~  393 (394)
                      .+   .+||+|||+|++..|+.+..+|||||||++
T Consensus       515 ~~---~~~~~r~A~R~~~~~~~~~~~iGFR~a~~~  546 (559)
T TIGR03524       515 RD---REYWLDPAQRRYLPQYMATDYIGFRCAMSR  546 (559)
T ss_pred             CC---CccccchhhccCCCccccccceeEEEEecc
Confidence            96   455669999999999999999999999975

Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldJ is a lipoprotein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae. Knockouts of GldJ abolish the gliding phenotype. GldJ is homologous to GldK. There is a GldJ homolog in Cytophaga hutchinsonii and several other species that has a different, shorter architecture and is represented by a separate model. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
>TIGR03530 GldJ_short gliding motility-associated lipoprotein GldJ Back     alignment and domain information
>TIGR03529 GldK_short gliding motility-associated lipoprotein GldK Back     alignment and domain information
>TIGR03525 GldK gliding motility-associated lipoprotein GldK Back     alignment and domain information
>PF03781 FGE-sulfatase: Sulfatase-modifying factor enzyme 1; InterPro: IPR005532 This domain is found in eukaryotic proteins [] required for post-translational sulphatase modification (SUMF1) Back     alignment and domain information
>TIGR03440 unchr_TIGR03440 conserved hypothetical protein TIGR03440 Back     alignment and domain information
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 Back     alignment and domain information
>COG1262 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR03525 GldK gliding motility-associated lipoprotein GldK Back     alignment and domain information
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 Back     alignment and domain information
>TIGR03529 GldK_short gliding motility-associated lipoprotein GldK Back     alignment and domain information
>PF03781 FGE-sulfatase: Sulfatase-modifying factor enzyme 1; InterPro: IPR005532 This domain is found in eukaryotic proteins [] required for post-translational sulphatase modification (SUMF1) Back     alignment and domain information
>PHA00653 mtd major tropism determinant Back     alignment and domain information
>TIGR03440 unchr_TIGR03440 conserved hypothetical protein TIGR03440 Back     alignment and domain information
>COG1262 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR03524 GldJ gliding motility-associated lipoprotein GldJ Back     alignment and domain information
>TIGR03530 GldJ_short gliding motility-associated lipoprotein GldJ Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
1y1e_X311 Human Formylglycine Generating Enzyme Length = 311 1e-106
2aii_X286 Wild-Type Formylglycine Generating Enzyme Reacted W 1e-105
1y1f_X311 Human Formylglycine Generating Enzyme With Cysteine 1e-105
2aft_X286 Formylglycine Generating Enzyme C336s Mutant Length 1e-104
1y1g_X311 Human Formylglycine Generating Enzyme, Double Sulfo 1e-104
2afy_X286 Formylglycine Generating Enzyme C341s Mutant Length 1e-103
2q17_A346 Formylglycine Generating Enzyme From Streptomyces C 7e-72
1y4j_A284 Crystal Structure Of The Paralogue Of The Human For 3e-56
2y3c_A294 Treponema Denticola Variable Protein 1 Length = 294 4e-13
>pdb|1Y1E|X Chain X, Human Formylglycine Generating Enzyme Length = 311 Back     alignment and structure 
Iteration: 1

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/346 (55%), Positives = 231/346 (66%), Gaps = 54/346 (15%)
Query: 5   PAP-PVER---YKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQF 60
           P P P ER   +  MV +P   F MGT+ P + +DGE P+R VT+DAFY+D +EVSNT+F
Sbjct: 5   PGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEF 64
Query: 61  QEFVSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVV 120
           ++FV++TGY+TEAEKFGD+FVFE +LSE+ +  I Q                        
Sbjct: 65  EKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQ------------------------ 100
Query: 121 HISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPV 180
                 AVA   W    LP +                   +W HPEG DSTI HR +HPV
Sbjct: 101 ------AVAAAPWW---LPVKG-----------------ANWRHPEGPDSTILHRPDHPV 134
Query: 181 VHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFP 240
           +HVSWNDAVAYCTW G RLPTEAEWEY CRGGL NRLFPWGN L P+G+H AN+WQGEFP
Sbjct: 135 LHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFP 194
Query: 241 TNNTAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTD 300
             NT  DG+  TAPV ++  N +GLYN+VGN WEWT+DWW VHH    + NPKGP +G D
Sbjct: 195 VTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKD 254
Query: 301 KVKKGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPT 346
           +VKKGGSY+C+  YCYR+RCAARSQNTPDSSA NLGFRCAAD+ PT
Sbjct: 255 RVKKGGSYMCHRSYCYRYRCAARSQNTPDSSASNLGFRCAADRLPT 300
>pdb|2AII|X Chain X, Wild-Type Formylglycine Generating Enzyme Reacted With Iodoacetamide Length = 286 Back     alignment and structure
>pdb|1Y1F|X Chain X, Human Formylglycine Generating Enzyme With Cysteine Sulfenic Acid Length = 311 Back     alignment and structure
>pdb|2AFT|X Chain X, Formylglycine Generating Enzyme C336s Mutant Length = 286 Back     alignment and structure
>pdb|1Y1G|X Chain X, Human Formylglycine Generating Enzyme, Double Sulfonic Acid Form Length = 311 Back     alignment and structure
>pdb|2AFY|X Chain X, Formylglycine Generating Enzyme C341s Mutant Length = 286 Back     alignment and structure
>pdb|2Q17|A Chain A, Formylglycine Generating Enzyme From Streptomyces Coelicolor Length = 346 Back     alignment and structure
>pdb|1Y4J|A Chain A, Crystal Structure Of The Paralogue Of The Human Formylglycine Generating Enzyme Length = 284 Back     alignment and structure
>pdb|2Y3C|A Chain A, Treponema Denticola Variable Protein 1 Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
1z70_X311 C-alpha-formyglycine-generating enzyme; formylglyc 1e-126
2q17_A346 Formylglycine generating enzyme; FGE, sulfatase, u 1e-118
1y4j_A284 Sulfatase modifying factor 2; formylglycine, sulfa 1e-111
2y3c_A294 Treponema denticola variable protein 1; unknown fu 3e-95
1yu0_A381 Major tropism determinant (MTD-P1); C-type lectin, 2e-33
1yu0_A381 Major tropism determinant (MTD-P1); C-type lectin, 6e-12
>1z70_X C-alpha-formyglycine-generating enzyme; formylglycine, multiple sulfatase deficiency, cysteine sulfe oxidoreductase; HET: OCS NAG CXS; 1.15A {Homo sapiens} SCOP: d.169.1.7 PDB: 1y1f_X* 1y1e_X* 1y1h_X* 1y1i_X* 1y1g_X* 1y1j_X* 2aii_X* 2aij_X* 2aft_X* 2aik_X* 2hi8_X* 2hib_X* 2afy_X* Length = 311 Back     alignment and structure
 Score =  364 bits (935), Expect = e-126
 Identities = 185/348 (53%), Positives = 223/348 (64%), Gaps = 50/348 (14%)

Query: 4   LPAPPVERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEF 63
           +P      +  MV +P   F MGT+ P + +DGE P+R VT+DAFY+D +EVSNT+F++F
Sbjct: 8   VPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKF 67

Query: 64  VSATGYVTEAEKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHIS 123
           V++TGY+TEAEKFGD+FVFE +LSE+ +  I                        V    
Sbjct: 68  VNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQ---------------------QAVAAAP 106

Query: 124 WNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHV 183
           W   V    WR                             HPEG DSTI HR +HPV+HV
Sbjct: 107 WWLPVKGANWR-----------------------------HPEGPDSTILHRPDHPVLHV 137

Query: 184 SWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNN 243
           SWNDAVAYCTW G RLPTEAEWEY CRGGL NRLFPWGN L P+G+H AN+WQGEFP  N
Sbjct: 138 SWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTN 197

Query: 244 TAADGYLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVK 303
           T  DG+  TAPV ++  N +GLYN+VGN WEWT+DWW VHH    + NPKGP +G D+VK
Sbjct: 198 TGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVK 257

Query: 304 KGGSYLCNEQYCYRHRCAARSQNTPDSSAGNLGFRCAADKGPTTGTDK 351
           KGGSY+C+  YCYR+RCAARSQNTPDSSA NLGFRCAAD+ PT     
Sbjct: 258 KGGSYMCHRSYCYRYRCAARSQNTPDSSASNLGFRCAADRLPTMDRGS 305
>2q17_A Formylglycine generating enzyme; FGE, sulfatase, unknown function; 2.10A {Streptomyces coelicolor} Length = 346 Back     alignment and structure
>1y4j_A Sulfatase modifying factor 2; formylglycine, sulfatases, multiple sulfatase deficiency, HO DUF323, sugar binding protein; HET: NAG FUC; 1.86A {Homo sapiens} SCOP: d.169.1.7 Length = 284 Back     alignment and structure
>2y3c_A Treponema denticola variable protein 1; unknown function, periodontal disease; HET: CME; 1.40A {Treponema denticola} Length = 294 Back     alignment and structure
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A Length = 381 Back     alignment and structure
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A Length = 381 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
1z70_X311 C-alpha-formyglycine-generating enzyme; formylglyc 100.0
2q17_A346 Formylglycine generating enzyme; FGE, sulfatase, u 100.0
1y4j_A284 Sulfatase modifying factor 2; formylglycine, sulfa 100.0
2y3c_A294 Treponema denticola variable protein 1; unknown fu 100.0
1yu0_A381 Major tropism determinant (MTD-P1); C-type lectin, 99.97
2y3c_A294 Treponema denticola variable protein 1; unknown fu 99.18
1z70_X311 C-alpha-formyglycine-generating enzyme; formylglyc 98.85
2q17_A346 Formylglycine generating enzyme; FGE, sulfatase, u 98.8
1y4j_A284 Sulfatase modifying factor 2; formylglycine, sulfa 98.79
1yu0_A381 Major tropism determinant (MTD-P1); C-type lectin, 98.52
>1z70_X C-alpha-formyglycine-generating enzyme; formylglycine, multiple sulfatase deficiency, cysteine sulfe oxidoreductase; HET: OCS NAG CXS; 1.15A {Homo sapiens} SCOP: d.169.1.7 PDB: 1y1f_X* 1y1e_X* 1y1h_X* 1y1i_X* 1y1g_X* 1y1j_X* 2aii_X* 2aij_X* 2aft_X* 2aik_X* 2hi8_X* 2hib_X* 2afy_X* Back     alignment and structure
Probab=100.00  E-value=1.7e-66  Score=500.12  Aligned_cols=289  Identities=64%  Similarity=1.202  Sum_probs=237.1

Q ss_pred             CCCCCCcEEeCCeeeEccCCCCCCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcchhhhcCCcccccCCccH
Q psy8678           9 VERYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSE   88 (394)
Q Consensus         9 ~~~~~~mv~IpgG~f~mG~~~~~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~~~~~~~~~~~~~~~~~   88 (394)
                      .....+||.||||+|+||++++.+..|+|.|.|+|+|++|+|++|||||+||++||++++|.+.+++.+++++++..+++
T Consensus        13 ~~~~~~mv~IpgG~f~mG~~~~~~~~d~E~P~h~V~v~~F~i~k~eVTn~ey~~Fv~~~gy~~~~e~~g~~~~~~~~~~~   92 (311)
T 1z70_X           13 QLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSE   92 (311)
T ss_dssp             -CCTTCEEEECCEEEEESCSSCSSGGGTCCCCEEEEECCEEEESSCCBHHHHHHHHHHHCCCCHHHHHTEEEEEGGGCC-
T ss_pred             CCCCCCeEEECCeEEEcCCCCcCCccccCCCceEEEECCEEEECeeECHHHHHHHHHhcCCcccccccCccccccccCCh
Confidence            34568899999999999998777778899999999999999999999999999999999999998888888888777665


Q ss_pred             HHHHhhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCccccCCc
Q psy8678          89 EERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGI  168 (394)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~~~~~~  168 (394)
                      +....+.+                              +.....||..   .+        +         ..|..+.++
T Consensus        93 ~~~~~~~~------------------------------~~~~~~~w~~---~~--------~---------~~w~~~~g~  122 (311)
T 1z70_X           93 QVKTNIQQ------------------------------AVAAAPWWLP---VK--------G---------ANWRHPEGP  122 (311)
T ss_dssp             ---------------------------------------CCSSTTEEE---EE--------T---------CBTTBTTST
T ss_pred             hhhhhhcc------------------------------ccccccceec---cC--------C---------cccccccCC
Confidence            54322211                              0000112100   00        1         356666666


Q ss_pred             CCccccccCCCcccCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCccccccccCCCCCCCCCCCC
Q psy8678         169 DSTIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADG  248 (394)
Q Consensus       169 ~~~~~~~~~~Pv~~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~~~~~~~~~~~~~~g  248 (394)
                      .+......++||++|||+||.+||+|+|+|||||+||||||||+...+.||||+...+.+...+|+|++.++..+...++
T Consensus       123 ~~~~~~~~~~PVv~VSw~dA~Ayc~W~g~RLPTEaEWEyAAr~g~~~~~y~~G~~~~~~~~~~~n~w~~~~~~~n~~~~~  202 (311)
T 1z70_X          123 DSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDG  202 (311)
T ss_dssp             TCCSTTCTTSBCCSCCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCSSCSBTTBSCSSGGGCCCSCCCCEETTTEECCTTS
T ss_pred             CcccccccCCCcccCCHHHHHHHHHHhCCCCCCHHHHHHHHhCCCCCCccCCCCcCCccchhhhcccccccccccccccC
Confidence            55555678999999999999999999999999999999999998888899999988777777889998877766667778


Q ss_pred             CCccccCcCCCCCcccccccccCHHHhccccccCCCCCCCCCCCCCCCCCCCeEEeCccccCCccccccceeccccCCCC
Q psy8678         249 YLSTAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTP  328 (394)
Q Consensus       249 ~~~~~pVg~~~~n~~GlyDM~GNV~EW~~d~y~~~~~~~~~~~~~~~~~g~~~v~rGGs~~~~~~~~~~~r~~~r~~~~~  328 (394)
                      +..+.|||++++|+||||||+|||||||.|+|.+++...+..+|.++..+..+|+|||||.+...+|..+|++.|....|
T Consensus       203 ~~~t~pVg~~~~n~~GlyDm~GNVwEW~~d~y~~y~~~~~~~~p~~~~~~~~rVlRGGSw~~~~~~~~~~R~a~R~~~~p  282 (311)
T 1z70_X          203 FQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTP  282 (311)
T ss_dssp             CSSCCCTTCSCCCTTSCCSSSSSSEEEEEEECCSCCCCSCEESCCCCSCCSSEEEESCCTTCBTTTBCCCSTTCCEEECT
T ss_pred             CcccccccccCCCCcccCCCCcCHHHHhCCcCccccCCCcccCCCCCCCCCeEEEeCCCCCCChhhhhheeeeeecCCCC
Confidence            88999999999999999999999999999999997666666778777788999999999999888887789999999999


Q ss_pred             CCCCCCCCccccccCCCCC
Q psy8678         329 DSSAGNLGFRCAADKGPTT  347 (394)
Q Consensus       329 ~~~~~~iGFR~v~~~~~~~  347 (394)
                      +.+..++|||||+++.+.+
T Consensus       283 ~~~~~~~GFR~v~~~~~~~  301 (311)
T 1z70_X          283 DSSASNLGFRCAADRLPTM  301 (311)
T ss_dssp             TCCBTTEECCCEESSCC--
T ss_pred             CcccCCEEEEEEEECCCcc
Confidence            9999999999999986655
>2q17_A Formylglycine generating enzyme; FGE, sulfatase, unknown function; 2.10A {Streptomyces coelicolor} Back     alignment and structure
>1y4j_A Sulfatase modifying factor 2; formylglycine, sulfatases, multiple sulfatase deficiency, HO DUF323, sugar binding protein; HET: NAG FUC; 1.86A {Homo sapiens} SCOP: d.169.1.7 Back     alignment and structure
>2y3c_A Treponema denticola variable protein 1; unknown function, periodontal disease; HET: CME; 1.40A {Treponema denticola} Back     alignment and structure
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A Back     alignment and structure
>2y3c_A Treponema denticola variable protein 1; unknown function, periodontal disease; HET: CME; 1.40A {Treponema denticola} Back     alignment and structure
>1z70_X C-alpha-formyglycine-generating enzyme; formylglycine, multiple sulfatase deficiency, cysteine sulfe oxidoreductase; HET: OCS NAG CXS; 1.15A {Homo sapiens} SCOP: d.169.1.7 PDB: 1y1f_X* 1y1e_X* 1y1h_X* 1y1i_X* 1y1g_X* 1y1j_X* 2aii_X* 2aij_X* 2aft_X* 2aik_X* 2hi8_X* 2hib_X* 2afy_X* Back     alignment and structure
>2q17_A Formylglycine generating enzyme; FGE, sulfatase, unknown function; 2.10A {Streptomyces coelicolor} Back     alignment and structure
>1y4j_A Sulfatase modifying factor 2; formylglycine, sulfatases, multiple sulfatase deficiency, HO DUF323, sugar binding protein; HET: NAG FUC; 1.86A {Homo sapiens} SCOP: d.169.1.7 Back     alignment and structure
>1yu0_A Major tropism determinant (MTD-P1); C-type lectin, beta sandwich, beta prism, variability, diver generating retroelement, viral protein; 1.56A {Bordetella phage bpp-1} SCOP: b.163.1.1 d.169.1.8 PDB: 2iou_A 1yu1_A 1yu2_A 1yu4_A 1yu3_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d1z70x1286 d.169.1.7 (X:1086-1371) Sulfatase modifying factor 2e-63
d1y4ja1267 d.169.1.7 (A:28-294) Sulfatase modifying factor 2 2e-44
d1yu0a2210 d.169.1.8 (A:171-380) Major tropism determinant (M 1e-38
d1yu0a2210 d.169.1.8 (A:171-380) Major tropism determinant (M 1e-11
>d1z70x1 d.169.1.7 (X:1086-1371) Sulfatase modifying factor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 286 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: Sulfatase-modifying factor-like
domain: Sulfatase modifying factor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (514), Expect = 2e-63
 Identities = 182/332 (54%), Positives = 220/332 (66%), Gaps = 50/332 (15%)

Query: 14  DMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEA 73
            MV +P   F MGT+ P + +DGE P+R VT+DAFY+D +EVSNT+F++FV++TGY+TEA
Sbjct: 5   KMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEA 64

Query: 74  EKFGDTFVFEPLLSEEERAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTW 133
           EKFGD+FVFE +LSE+ +                               +   AVA   W
Sbjct: 65  EKFGDSFVFEGMLSEQVKT------------------------------NIQQAVAAAPW 94

Query: 134 RGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDSTIEHRMNHPVVHVSWNDAVAYCT 193
                                      +W HPEG DSTI HR +HPV+HVSWNDAVAYCT
Sbjct: 95  WLPV--------------------KGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCT 134

Query: 194 WRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYLSTA 253
           W G RLPTEAEWEY CRGGL NRLFPWGN L P+G+H AN+WQGEFP  NT  DG+  TA
Sbjct: 135 WAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTA 194

Query: 254 PVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQ 313
           PV ++  N +GLYN+VGN WEWT+DWW VHH    + NPKGP +G D+VKKGGSY+C+  
Sbjct: 195 PVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRS 254

Query: 314 YCYRHRCAARSQNTPDSSAGNLGFRCAADKGP 345
           YCYR+RCAARSQNTPDSSA NLGFRCAAD+ P
Sbjct: 255 YCYRYRCAARSQNTPDSSASNLGFRCAADRLP 286
>d1y4ja1 d.169.1.7 (A:28-294) Sulfatase modifying factor 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 267 Back     information, alignment and structure
>d1yu0a2 d.169.1.8 (A:171-380) Major tropism determinant (Mtd), C-terminal domain {Bordetella phage bpp-1 [TaxId: 194699]} Length = 210 Back     information, alignment and structure
>d1yu0a2 d.169.1.8 (A:171-380) Major tropism determinant (Mtd), C-terminal domain {Bordetella phage bpp-1 [TaxId: 194699]} Length = 210 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d1z70x1286 Sulfatase modifying factor 1 {Human (Homo sapiens) 100.0
d1y4ja1267 Sulfatase modifying factor 2 {Human (Homo sapiens) 100.0
d1yu0a2210 Major tropism determinant (Mtd), C-terminal domain 100.0
d1yu0a2210 Major tropism determinant (Mtd), C-terminal domain 98.8
d1z70x1286 Sulfatase modifying factor 1 {Human (Homo sapiens) 98.51
d1y4ja1267 Sulfatase modifying factor 2 {Human (Homo sapiens) 98.12
>d1z70x1 d.169.1.7 (X:1086-1371) Sulfatase modifying factor 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: Sulfatase-modifying factor-like
domain: Sulfatase modifying factor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-59  Score=445.17  Aligned_cols=285  Identities=65%  Similarity=1.213  Sum_probs=222.6

Q ss_pred             CCCCcEEeCCeeeEccCCCCCCCCCCCCCceEEEccceEeeecccCHHHHHHHHHHcCCcchhhhcCCcccccCCccHHH
Q psy8678          11 RYKDMVLLPGDTFRMGTNKPILIKDGEFPSRNVTLDAFYLDQHEVSNTQFQEFVSATGYVTEAEKFGDTFVFEPLLSEEE   90 (394)
Q Consensus        11 ~~~~mv~IpgG~f~mG~~~~~~~~~~~~p~~~v~v~~F~i~~~EVTn~~y~~fl~~~g~~~~~~~~~~~~~~~~~~~~~~   90 (394)
                      +..+||.||||+|+||++++++..|+|.|.|+|+|++|+|+||||||+||++||++++|...++..+.++++...+....
T Consensus         2 a~~~mv~IpgG~f~mGs~~~~~~~d~e~p~~~v~l~~F~i~k~eVTn~qy~~F~~~~g~~~~~~~~~~~~~~~~~~~~~~   81 (286)
T d1z70x1           2 AHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQV   81 (286)
T ss_dssp             CTTCEEEECCEEEEESCSSCSSGGGTCCCCEEEEECCEEEESSCCBHHHHHHHHHHHCCCCHHHHHTEEEEEGGGCC---
T ss_pred             CCCCceEecCcEEEcCCCCCcccccCCCCceEEEECCeEEeCchHHHHHHHHHHHhcCCCChhhhcCcchhhccccchhc
Confidence            45789999999999999988889999999999999999999999999999999999999988877777777666555433


Q ss_pred             HHhhhhhccccccccCCcccccccCCCceeeecHHHHHHhhhhhcCCCcchhhhhhcccCCccCccCCCCCccccCCcCC
Q psy8678          91 RAKISQVRHDMKRFEGLDSTIEHRMHHPVVHISWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGSWLHPEGIDS  170 (394)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PV~~vsW~~A~~y~~w~~~~~~~~~~~~~~~~~g~~~~~~~~~~w~~~~~~~~  170 (394)
                      .....+                     ++..+.|.+++..|+|.                             .......
T Consensus        82 ~~~~~~---------------------~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~  111 (286)
T d1z70x1          82 KTNIQQ---------------------AVAAAPWWLPVKGANWR-----------------------------HPEGPDS  111 (286)
T ss_dssp             ----------------------------CCSSTTEEEEETCBTT-----------------------------BTTSTTC
T ss_pred             cccccc---------------------ccccCccceeccCcccc-----------------------------ccccccc
Confidence            322221                     22222222222233332                             1111111


Q ss_pred             ccccccCCCcccCCHHHHHHHHHHcCCCCCCHHHHHHHHhcCCCCccccCCCCCCCCCccccccccCCCCCCCCCCCCCC
Q psy8678         171 TIEHRMNHPVVHVSWNDAVAYCTWRGARLPTEAEWEYGCRGGLENRLFPWGNNLTPRGEHRANVWQGEFPTNNTAADGYL  250 (394)
Q Consensus       171 ~~~~~~~~Pv~~Vsw~dA~~yc~wlg~RLPTEaEWEyAArg~~~~~~ypwg~~~~~~~~~~an~~~~~~~~~~~~~~g~~  250 (394)
                      ......+.||+.|+|.+|.+||+|+|+|||||+||||||+++...+.||||+...+...+....+.+.........+...
T Consensus       112 ~~~~~~~~~v~~vsw~~a~a~~~~~g~RLPTEaEWE~AAr~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (286)
T d1z70x1         112 TILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQ  191 (286)
T ss_dssp             CSTTCTTSBCCSCCHHHHHHHHHHTTCBCCCHHHHHHHHHTTCSSCSBTTBSCSSGGGCCCSCCCCEETTTEECCTTSCS
T ss_pred             ccccCcccceeEecHHHHHHHHHHhcCcCCCHHHHhhhhhcCccccccccCCCcCcccccccccccccccccccCCCCcc
Confidence            22345789999999999999999999999999999999999988899999988776655444443333333333344456


Q ss_pred             ccccCcCCCCCcccccccccCHHHhccccccCCCCCCCCCCCCCCCCCCCeEEeCccccCCccccccceeccccCCCCCC
Q psy8678         251 STAPVMSYKENKFGLYNMVGNVWEWTADWWNVHHHPAPSYNPKGPTTGTDKVKKGGSYLCNEQYCYRHRCAARSQNTPDS  330 (394)
Q Consensus       251 ~~~pVg~~~~n~~GlyDM~GNV~EW~~d~y~~~~~~~~~~~~~~~~~g~~~v~rGGs~~~~~~~~~~~r~~~r~~~~~~~  330 (394)
                      .+.||+++++|++|||||+|||||||.|+|.++.......++.++..+.++|+|||||.+....|..+|++.|....++.
T Consensus       192 ~~~~vg~~~pn~~Gl~Dm~GNVwEW~~d~~~~~~~~~~~~~~~~~~~g~~rv~RGGSw~~~~~~~~~~R~~~R~~~~~~~  271 (286)
T d1z70x1         192 GTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDS  271 (286)
T ss_dssp             SCCCTTCSCCCTTSCCSSSSSSEEEEEEECCSCCCCSCEESCCCCSCCSSEEEESCCTTCBTTTBCCCSTTCCEEECTTC
T ss_pred             ccccCCCcCCCcccccchhhHhhhhcccccccCcccccccCCCCCCCCCEeEEeCCCCCCCcchhhhcccccccCCCCCC
Confidence            88999999999999999999999999999999887777778888888999999999999988877778999999999999


Q ss_pred             CCCCCCccccccCCC
Q psy8678         331 SAGNLGFRCAADKGP  345 (394)
Q Consensus       331 ~~~~iGFR~v~~~~~  345 (394)
                      +..++|||||++..|
T Consensus       272 ~~~~~GFR~v~d~~~  286 (286)
T d1z70x1         272 SASNLGFRCAADRLP  286 (286)
T ss_dssp             CBTTEECCCEESSCC
T ss_pred             ccCCEEeEEEeeCCC
Confidence            999999999998754
>d1y4ja1 d.169.1.7 (A:28-294) Sulfatase modifying factor 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yu0a2 d.169.1.8 (A:171-380) Major tropism determinant (Mtd), C-terminal domain {Bordetella phage bpp-1 [TaxId: 194699]} Back     information, alignment and structure
>d1yu0a2 d.169.1.8 (A:171-380) Major tropism determinant (Mtd), C-terminal domain {Bordetella phage bpp-1 [TaxId: 194699]} Back     information, alignment and structure
>d1z70x1 d.169.1.7 (X:1086-1371) Sulfatase modifying factor 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y4ja1 d.169.1.7 (A:28-294) Sulfatase modifying factor 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure