Psyllid ID: psy8744


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
ccEEEEEcccccHHHHHHHcccccccccccEEEcccccccccccEEEEEccEEcccccccccHHHHHHHHccccccccccHHHHHHcccccccEEEEEcccHHHHHcccccccccc
EEEEEEEccccccccccHHHccccccEEEEEEEEccccccccccccccccEEEEcccccEccHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEEEEEEcHHHHHHccccccccc
afgyfevthdiTQYTKAAVFSKIGKRTKIGVRFstvggesgsadtARSIRLFRTnqkiknlpvkraedlagsdpdysirDLYNsiaagkypsyTFYIQVMTFEQaenwkwnpfdlt
afgyfevthditqytkaavfskigkrtKIGVrfstvggesgsadtarsirlfrtnqkiknlpvkraedlagsdpdySIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
**GYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVG***********IRLFRTNQKIK***************DYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPF***
AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTV********TARSIRLFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query116 2.2.26 [Sep-21-2011]
Q9PT92 526 Catalase OS=Danio rerio G yes N/A 0.517 0.114 0.769 5e-26
P04762 527 Catalase OS=Rattus norveg yes N/A 0.560 0.123 0.646 6e-20
P17336 506 Catalase OS=Drosophila me yes N/A 0.517 0.118 0.661 1e-19
P24270 527 Catalase OS=Mus musculus yes N/A 0.560 0.123 0.646 2e-19
P04040 527 Catalase OS=Homo sapiens yes N/A 0.560 0.123 0.661 2e-19
Q9PWF7 528 Catalase OS=Glandirana ru N/A N/A 0.560 0.123 0.646 4e-19
O97492 527 Catalase OS=Canis familia yes N/A 0.517 0.113 0.630 4e-19
Q5RF10 527 Catalase OS=Pongo abelii yes N/A 0.560 0.123 0.646 2e-18
O62839 527 Catalase OS=Sus scrofa GN yes N/A 0.560 0.123 0.630 2e-18
Q64405 527 Catalase OS=Cavia porcell yes N/A 0.758 0.166 0.483 3e-18
>sp|Q9PT92|CATA_DANRE Catalase OS=Danio rerio GN=cat PE=2 SV=1 Back     alignment and function desciption
 Score =  115 bits (289), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 59/65 (90%)

Query: 52  FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
           ++TNQ IKN+PV+ A+ LA +DPDYSIRDLYN+IA G +PS+TFYIQVMTFEQAENWKWN
Sbjct: 236 YKTNQGIKNIPVEEADRLAATDPDYSIRDLYNAIANGNFPSWTFYIQVMTFEQAENWKWN 295

Query: 112 PFDLT 116
           PFDLT
Sbjct: 296 PFDLT 300




Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
Danio rerio (taxid: 7955)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 6
>sp|P04762|CATA_RAT Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3 Back     alignment and function description
>sp|P17336|CATA_DROME Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2 Back     alignment and function description
>sp|P24270|CATA_MOUSE Catalase OS=Mus musculus GN=Cat PE=1 SV=4 Back     alignment and function description
>sp|P04040|CATA_HUMAN Catalase OS=Homo sapiens GN=CAT PE=1 SV=3 Back     alignment and function description
>sp|Q9PWF7|CATA_GLARU Catalase OS=Glandirana rugosa GN=cat PE=2 SV=3 Back     alignment and function description
>sp|O97492|CATA_CANFA Catalase OS=Canis familiaris GN=CAT PE=1 SV=3 Back     alignment and function description
>sp|Q5RF10|CATA_PONAB Catalase OS=Pongo abelii GN=CAT PE=2 SV=3 Back     alignment and function description
>sp|O62839|CATA_PIG Catalase OS=Sus scrofa GN=CAT PE=1 SV=4 Back     alignment and function description
>sp|Q64405|CATA_CAVPO Catalase OS=Cavia porcellus GN=CAT PE=2 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query116
47207742 377 unnamed protein product [Tetraodon nigro 1.0 0.307 0.528 3e-31
196016221 319 hypothetical protein TRIADDRAFT_64400 [T 1.0 0.363 0.455 7e-26
9972785 526 RecName: Full=Catalase gi|6687417|emb|CA 0.517 0.114 0.769 2e-24
9622234 526 catalase [Danio rerio] 0.560 0.123 0.769 2e-24
56744251 526 catalase [Danio rerio] gi|30185757|gb|AA 0.560 0.123 0.769 3e-24
359843258 521 catalase, partial [Schistocerca gregaria 0.517 0.115 0.784 3e-24
441494174 525 catalase [Carassius auratus ssp. 'Pengze 0.517 0.114 0.738 1e-23
300676317 425 catalase [Cyprinus carpio] 0.517 0.141 0.753 2e-23
260150386 525 catalase [Ctenopharyngodon idella] 0.517 0.114 0.738 4e-23
300680030 525 catalase [Hypophthalmichthys nobilis] 0.517 0.114 0.738 5e-23
>gi|47207742|emb|CAF94333.1| unnamed protein product [Tetraodon nigroviridis] Back     alignment and taxonomy information
 Score =  139 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 74/140 (52%), Positives = 90/140 (64%), Gaps = 24/140 (17%)

Query: 1   AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVG---GESGSADTARSIR------- 50
           AFGYFEVTHDIT+Y KA VF  +GK T I VRFSTV     + G  D  R +        
Sbjct: 60  AFGYFEVTHDITRYCKAKVFEHVGKTTPIAVRFSTVSFLFSDRGLPDGHRHMNGYGSHTF 119

Query: 51  --------------LFRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFY 96
                          ++T+Q IKNL V+ AE LA +DPDY+I DL+N+IA G YPS+TFY
Sbjct: 120 KLVNAKGECVYCKFHYKTDQGIKNLSVEEAERLASTDPDYAIGDLFNAIANGNYPSWTFY 179

Query: 97  IQVMTFEQAENWKWNPFDLT 116
           IQVMTFEQAE +++NPFDLT
Sbjct: 180 IQVMTFEQAEKFQFNPFDLT 199




Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|196016221|ref|XP_002117964.1| hypothetical protein TRIADDRAFT_64400 [Trichoplax adhaerens] gi|190579437|gb|EDV19532.1| hypothetical protein TRIADDRAFT_64400 [Trichoplax adhaerens] Back     alignment and taxonomy information
>gi|9972785|sp|Q9PT92.1|CATA_DANRE RecName: Full=Catalase gi|6687417|emb|CAB64949.1| catalase [Danio rerio] Back     alignment and taxonomy information
>gi|9622234|gb|AAF89686.1|AF170069_1 catalase [Danio rerio] Back     alignment and taxonomy information
>gi|56744251|ref|NP_570987.1| catalase [Danio rerio] gi|30185757|gb|AAH51626.1| Catalase [Danio rerio] Back     alignment and taxonomy information
>gi|359843258|gb|AEV89764.1| catalase, partial [Schistocerca gregaria] Back     alignment and taxonomy information
>gi|441494174|gb|AGC50801.1| catalase [Carassius auratus ssp. 'Pengze'] Back     alignment and taxonomy information
>gi|300676317|gb|ADK26528.1| catalase [Cyprinus carpio] Back     alignment and taxonomy information
>gi|260150386|gb|ACL99859.2| catalase [Ctenopharyngodon idella] Back     alignment and taxonomy information
>gi|300680030|gb|ADK27719.1| catalase [Hypophthalmichthys nobilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query116
SGD|S000002664 515 CTA1 "Catalase A" [Saccharomyc 0.465 0.104 0.685 6.3e-27
ZFIN|ZDB-GENE-000210-20 526 cat "catalase" [Danio rerio (t 0.560 0.123 0.769 1.9e-24
CGD|CAL0000462 487 CAT1 [Candida albicans (taxid: 0.560 0.133 0.507 6.6e-24
UNIPROTKB|O13289 487 CTA1 "Peroxisomal catalase" [C 0.560 0.133 0.507 6.6e-24
UNIPROTKB|Q48D63 481 katA "Catalase" [Pseudomonas s 0.560 0.135 0.461 3.6e-23
ASPGD|ASPL0000003481 501 catC [Emericella nidulans (tax 0.551 0.127 0.468 1e-22
RGD|2279 527 Cat "catalase" [Rattus norvegi 0.560 0.123 0.646 7.6e-20
UNIPROTKB|P04040 527 CAT "Catalase" [Homo sapiens ( 0.560 0.123 0.661 2.1e-19
FB|FBgn0000261 506 Cat "Catalase" [Drosophila mel 0.560 0.128 0.661 1.1e-18
UNIPROTKB|O97492 527 CAT "Catalase" [Canis lupus fa 0.560 0.123 0.630 1.2e-18
SGD|S000002664 CTA1 "Catalase A" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
 Score = 175 (66.7 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
 Identities = 37/54 (68%), Positives = 40/54 (74%)

Query:     1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
             AFGYFEVT DIT    +A+FSKIGKRTK   RFSTVGG+ GSADT R  R F T
Sbjct:    76 AFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFAT 129


GO:0000302 "response to reactive oxygen species" evidence=IMP
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0005777 "peroxisome" evidence=IEA
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA;IGI;IDA;IMP
GO:0046872 "metal ion binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0004096 "catalase activity" evidence=IEA;IGI;IDA;IMP
GO:0001315 "age-dependent response to reactive oxygen species" evidence=IGI;IMP
GO:0005782 "peroxisomal matrix" evidence=IDA
GO:0005759 "mitochondrial matrix" evidence=IDA
GO:0004601 "peroxidase activity" evidence=IEA
ZFIN|ZDB-GENE-000210-20 cat "catalase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
CGD|CAL0000462 CAT1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|O13289 CTA1 "Peroxisomal catalase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
UNIPROTKB|Q48D63 katA "Catalase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
ASPGD|ASPL0000003481 catC [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
RGD|2279 Cat "catalase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P04040 CAT "Catalase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0000261 Cat "Catalase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|O97492 CAT "Catalase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O52762CATA_PSEAE1, ., 1, 1, ., 1, ., 60.59610.44820.1078yesN/A
Q8CPD0CATA_STAES1, ., 1, 1, ., 1, ., 60.55380.56030.1289yesN/A
P55306CATA_SCHPO1, ., 1, 1, ., 1, ., 60.63460.44820.1015yesN/A
Q59714CATA_PSEPU1, ., 1, 1, ., 1, ., 60.50760.56030.1356yesN/A
P42321CATA_PROMI1, ., 1, 1, ., 1, ., 60.61530.44820.1074yesN/A
Q5HPK8CATA_STAEQ1, ., 1, 1, ., 1, ., 60.55380.56030.1289yesN/A
Q7A5T2CATA_STAAN1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
Q5HG86CATA_STAAC1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
Q5RF10CATA_PONAB1, ., 1, 1, ., 1, ., 60.64610.56030.1233yesN/A
Q6GH72CATA_STAAR1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
O97492CATA_CANFA1, ., 1, 1, ., 1, ., 60.63070.51720.1138yesN/A
P24270CATA_MOUSE1, ., 1, 1, ., 1, ., 60.64610.56030.1233yesN/A
P00432CATA_BOVIN1, ., 1, 1, ., 1, ., 60.61530.51720.1138yesN/A
Q49XC1CATA_STAS11, ., 1, 1, ., 1, ., 60.61530.44820.1050yesN/A
Q27487CATA1_CAEEL1, ., 1, 1, ., 1, ., 60.60.51720.12yesN/A
P44390CATA_HAEIN1, ., 1, 1, ., 1, ., 60.59610.44820.1023yesN/A
P15202CATA_YEAST1, ., 1, 1, ., 1, ., 60.68510.46550.1048yesN/A
Q2FYU7CATA_STAA81, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
O93662CATA_METBF1, ., 1, 1, ., 1, ., 60.50760.51720.1188yesN/A
Q9ZN99CATA_DESVM1, ., 1, 1, ., 1, ., 60.54320.65510.1583yesN/A
P45737CATA_BACFR1, ., 1, 1, ., 1, ., 60.63460.44820.1069yesN/A
Q9L4S1CATA_STAAU1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
P17336CATA_DROME1, ., 1, 1, ., 1, ., 60.66150.51720.1185yesN/A
O68146CATA_VIBF11, ., 1, 1, ., 1, ., 60.61530.44820.1078yesN/A
P04762CATA_RAT1, ., 1, 1, ., 1, ., 60.64610.56030.1233yesN/A
Q2PUJ9CATA_STAEP1, ., 1, 1, ., 1, ., 60.55380.56030.1289yesN/A
Q99UE2CATA_STAAM1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
O62839CATA_PIG1, ., 1, 1, ., 1, ., 60.63070.56030.1233yesN/A
P04040CATA_HUMAN1, ., 1, 1, ., 1, ., 60.66150.56030.1233yesN/A
Q4L643CATA_STAHJ1, ., 1, 1, ., 1, ., 60.52300.56030.1292yesN/A
Q2YXT2CATA_STAAB1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
Q6G9M4CATA_STAAS1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
Q8NWV5CATA_STAAW1, ., 1, 1, ., 1, ., 60.55380.56030.1287yesN/A
Q9PT92CATA_DANRE1, ., 1, 1, ., 1, ., 60.76920.51720.1140yesN/A
Q2I6W4CATA_CALJA1, ., 1, 1, ., 1, ., 60.61530.56030.1233yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.6LOW CONFIDENCE prediction!
3rd Layer1.11.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query116
cd08156 429 cd08156, catalase_clade_3, Clade 3 of the heme-bin 5e-34
smart01060 373 smart01060, Catalase, Catalases are antioxidant en 1e-29
cd08156 429 cd08156, catalase_clade_3, Clade 3 of the heme-bin 5e-29
smart01060 373 smart01060, Catalase, Catalases are antioxidant en 1e-26
pfam00199 383 pfam00199, Catalase, Catalase 3e-23
pfam00199 383 pfam00199, Catalase, Catalase 7e-23
cd08157 451 cd08157, catalase_fungal, Fungal catalases similar 2e-21
cd08157 451 cd08157, catalase_fungal, Fungal catalases similar 8e-21
COG0753 496 COG0753, KatE, Catalase [Inorganic ion transport a 8e-21
cd00328 433 cd00328, catalase, Catalase heme-binding enzyme 4e-20
COG0753 496 COG0753, KatE, Catalase [Inorganic ion transport a 7e-20
cd00328 433 cd00328, catalase, Catalase heme-binding enzyme 1e-19
PLN02609 492 PLN02609, PLN02609, catalase 2e-17
cd08155 443 cd08155, catalase_clade_2, Clade 2 of the heme-bin 2e-16
cd08154 469 cd08154, catalase_clade_1, Clade 1 of the heme-bin 6e-16
PLN02609 492 PLN02609, PLN02609, catalase 7e-16
PRK11249 752 PRK11249, katE, hydroperoxidase II; Provisional 3e-14
cd08154 469 cd08154, catalase_clade_1, Clade 1 of the heme-bin 5e-14
cd08155 443 cd08155, catalase_clade_2, Clade 2 of the heme-bin 8e-08
PRK11249 752 PRK11249, katE, hydroperoxidase II; Provisional 1e-06
cd08153 295 cd08153, srpA_like, Catalase-like heme-binding pro 6e-04
cd08150 283 cd08150, catalase_like, Catalase-like heme-binding 7e-04
>gnl|CDD|163712 cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase Back     alignment and domain information
 Score =  121 bits (306), Expect = 5e-34
 Identities = 36/65 (55%), Positives = 49/65 (75%)

Query: 52  FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
           F+T+Q IKNL  + A +LAG DPDY+ RDL+ +I  G +PS+T Y+QVM  E AE +++N
Sbjct: 169 FKTDQGIKNLTNEEAAELAGEDPDYAQRDLFEAIERGDFPSWTLYVQVMPEEDAEKYRFN 228

Query: 112 PFDLT 116
           PFDLT
Sbjct: 229 PFDLT 233


Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes. Length = 429

>gnl|CDD|215003 smart01060, Catalase, Catalases are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects Back     alignment and domain information
>gnl|CDD|163712 cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase Back     alignment and domain information
>gnl|CDD|215003 smart01060, Catalase, Catalases are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects Back     alignment and domain information
>gnl|CDD|215783 pfam00199, Catalase, Catalase Back     alignment and domain information
>gnl|CDD|215783 pfam00199, Catalase, Catalase Back     alignment and domain information
>gnl|CDD|163713 cd08157, catalase_fungal, Fungal catalases similar to yeast catalases A and T Back     alignment and domain information
>gnl|CDD|163713 cd08157, catalase_fungal, Fungal catalases similar to yeast catalases A and T Back     alignment and domain information
>gnl|CDD|223824 COG0753, KatE, Catalase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|163705 cd00328, catalase, Catalase heme-binding enzyme Back     alignment and domain information
>gnl|CDD|223824 COG0753, KatE, Catalase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|163705 cd00328, catalase, Catalase heme-binding enzyme Back     alignment and domain information
>gnl|CDD|215328 PLN02609, PLN02609, catalase Back     alignment and domain information
>gnl|CDD|163711 cd08155, catalase_clade_2, Clade 2 of the heme-binding enzyme catalase Back     alignment and domain information
>gnl|CDD|163710 cd08154, catalase_clade_1, Clade 1 of the heme-binding enzyme catalase Back     alignment and domain information
>gnl|CDD|215328 PLN02609, PLN02609, catalase Back     alignment and domain information
>gnl|CDD|236886 PRK11249, katE, hydroperoxidase II; Provisional Back     alignment and domain information
>gnl|CDD|163710 cd08154, catalase_clade_1, Clade 1 of the heme-binding enzyme catalase Back     alignment and domain information
>gnl|CDD|163711 cd08155, catalase_clade_2, Clade 2 of the heme-binding enzyme catalase Back     alignment and domain information
>gnl|CDD|236886 PRK11249, katE, hydroperoxidase II; Provisional Back     alignment and domain information
>gnl|CDD|163709 cd08153, srpA_like, Catalase-like heme-binding proteins similar to the uncharacterized srpA Back     alignment and domain information
>gnl|CDD|163706 cd08150, catalase_like, Catalase-like heme-binding proteins and protein domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 116
KOG0047|consensus 505 100.0
COG0753 496 KatE Catalase [Inorganic ion transport and metabol 100.0
cd08156 429 catalase_clade_3 Clade 3 of the heme-binding enzym 100.0
PLN02609 492 catalase 100.0
cd08155 443 catalase_clade_2 Clade 2 of the heme-binding enzym 100.0
cd08154 469 catalase_clade_1 Clade 1 of the heme-binding enzym 100.0
cd00328 433 catalase Catalase heme-binding enzyme. Catalase is 100.0
PRK11249 752 katE hydroperoxidase II; Provisional 100.0
cd08157 451 catalase_fungal Fungal catalases similar to yeast 100.0
PF00199 384 Catalase: Catalase; InterPro: IPR011614 Catalases 99.97
cd08151328 AOS Allene oxide synthase. Allene oxide synthase c 99.91
cd08153295 srpA_like Catalase-like heme-binding proteins simi 99.89
cd08150283 catalase_like Catalase-like heme-binding proteins 99.89
cd08152305 y4iL_like Catalase-like heme-binding proteins simi 99.82
>KOG0047|consensus Back     alignment and domain information
Probab=100.00  E-value=1.4e-49  Score=326.16  Aligned_cols=116  Identities=71%  Similarity=1.106  Sum_probs=115.3

Q ss_pred             CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744           1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------   50 (116)
Q Consensus         1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------   50 (116)
                      |+||||+|+||++||+|++|+++||+|||++|||||+|++|||||+||||                              
T Consensus        78 A~GyFEvThDIt~~~~a~~f~kvgk~Tp~~vRFSTV~gE~GSaDT~RDPRGFAvKFYTeeGn~DlVgNNtPVFFiRDpik  157 (505)
T KOG0047|consen   78 AFGYFEVTHDITKYCKADIFSKVGKQTPVLVRFSTVGGESGSADTARDPRGFAVKFYTEEGNWDLVGNNTPVFFIRDPIK  157 (505)
T ss_pred             ceeEEEeechHHHHHHHHHHhhccccCceEEEEEeecccCCCcccccCCCcceEEEEeccccceeecCCcceEEeecccc
Confidence            79999999999999999999999999999999999999999999999999                              


Q ss_pred             --------------------------------------------------------------------------eeEeCc
Q psy8744          51 --------------------------------------------------------------------------LFRTNQ   56 (116)
Q Consensus        51 --------------------------------------------------------------------------~~~p~~   56 (116)
                                                                                                ||||.|
T Consensus       158 FP~fIHtqKrNPQthlkD~~m~wDf~t~~pEslHqv~~lFsDrGtP~~yrhM~Gyg~hTyk~vNk~G~~~YvkfH~ktdq  237 (505)
T KOG0047|consen  158 FPSFIHTQKRNPQTHLKDPDMFWDFLTLRPESLHQVMFLFSDRGTPDGYRHMNGYGSHTYKMVNKEGKAHYVKFHFKTDQ  237 (505)
T ss_pred             cchhhhccCCCchhcccCcchhHHHhhcCHhhhhheeeeeccCCCCcccccccccccceEEEEccCCceEEEEEEEecCC
Confidence                                                                                      999999


Q ss_pred             cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744          57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT  116 (116)
Q Consensus        57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T  116 (116)
                      |+|+|+.|||.+|+|.+|||+++|||++|++|+||+|+||||||+++++++|+|||||||
T Consensus       238 GiKnLt~e~A~~l~gs~pdya~~DLf~aI~~gnyPsW~~yIQvMt~~qa~K~~fnpfDvT  297 (505)
T KOG0047|consen  238 GIKNLTVEEAARLAGSDPDYAIRDLFNAIENGNYPSWTMYIQVMTPEQAEKFRFNPFDVT  297 (505)
T ss_pred             CcccCCHHHHHHhcCCCccHHHHHHHHHHHcCCCCceEEEEEeeCHhHhhcCCCCcccee
Confidence            999999999999999999999999999999999999999999999999999999999998



>COG0753 KatE Catalase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd08156 catalase_clade_3 Clade 3 of the heme-binding enzyme catalase Back     alignment and domain information
>PLN02609 catalase Back     alignment and domain information
>cd08155 catalase_clade_2 Clade 2 of the heme-binding enzyme catalase Back     alignment and domain information
>cd08154 catalase_clade_1 Clade 1 of the heme-binding enzyme catalase Back     alignment and domain information
>cd00328 catalase Catalase heme-binding enzyme Back     alignment and domain information
>PRK11249 katE hydroperoxidase II; Provisional Back     alignment and domain information
>cd08157 catalase_fungal Fungal catalases similar to yeast catalases A and T Back     alignment and domain information
>PF00199 Catalase: Catalase; InterPro: IPR011614 Catalases (1 Back     alignment and domain information
>cd08151 AOS Allene oxide synthase Back     alignment and domain information
>cd08153 srpA_like Catalase-like heme-binding proteins similar to the uncharacterized srpA Back     alignment and domain information
>cd08150 catalase_like Catalase-like heme-binding proteins and protein domains Back     alignment and domain information
>cd08152 y4iL_like Catalase-like heme-binding proteins similar to the uncharacterized y4iL Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query116
1qqw_A 527 Crystal Structure Of Human Erythrocyte Catalase Len 2e-20
1dgg_A 497 Human Erythrocyte Catalse Cyanide Complex Length = 2e-20
1dgh_B 498 Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole C 2e-20
1dgh_A 498 Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole C 2e-20
3nwl_A 527 The Crystal Structure Of The P212121 Form Of Bovine 6e-19
3rgp_A 499 Structural And Kinetic Analysis Of The Beef Liver C 6e-19
7cat_A 506 The Nadph Binding Site On Beef Liver Catalase Lengt 6e-19
1a4e_A 488 Catalase A From Saccharomyces Cerevisiae Length = 4 3e-14
1a4e_A 488 Catalase A From Saccharomyces Cerevisiae Length = 4 6e-12
2isa_A 483 Crystal Structure Of Vibrio Salmonicida Catalase Le 2e-13
2isa_A 483 Crystal Structure Of Vibrio Salmonicida Catalase Le 3e-07
1h6n_A 484 Formation Of A Tyrosyl Radical Intermediate In Prot 2e-13
1h6n_A 484 Formation Of A Tyrosyl Radical Intermediate In Prot 3e-10
1h7k_A 483 Formation Of A Tyrosyl Radical Intermediate In Prot 2e-13
1h7k_A 483 Formation Of A Tyrosyl Radical Intermediate In Prot 7e-10
1m85_A 484 Structure Of Proteus Mirabilis Catalase For The Nat 2e-13
1m85_A 484 Structure Of Proteus Mirabilis Catalase For The Nat 3e-10
3hb6_A 484 Inactive Mutant H54f Of Proteus Mirabilis Catalase 2e-13
3hb6_A 484 Inactive Mutant H54f Of Proteus Mirabilis Catalase 3e-10
1e93_A 484 High Resolution Structure And Biochemical Propertie 2e-13
1e93_A 484 High Resolution Structure And Biochemical Propertie 3e-10
1qwl_A 505 Structure Of Helicobacter Pylori Catalase Length = 5e-12
1qwl_A 505 Structure Of Helicobacter Pylori Catalase Length = 5e-10
2xq1_A 509 Crystal Structure Of Peroxisomal Catalase From The 5e-12
2a9e_A 505 Helicobacter Pylori Catalase Compound I Length = 50 5e-12
2a9e_A 505 Helicobacter Pylori Catalase Compound I Length = 50 5e-10
1si8_A 484 Crystal Structure Of E. Faecalis Catalase Length = 2e-11
1gwh_A 503 Atomic Resolution Structure Of Micrococcus Lysodeik 4e-10
1gwf_A 503 Compound Ii Structure Of Micrococcus Lysodeikticus 4e-10
1hbz_A 498 Catalase From Micrococcus Lysodeikticu Length = 498 4e-10
1p7z_A 753 Crystal Structure Of The D181s Variant Of Catalase 3e-07
1p7y_A 753 Crystal Structure Of The D181a Variant Of Catalase 5e-07
1qws_A 753 Structure Of The D181n Variant Of Catalase Hpii Fro 6e-07
1gg9_A 753 Crystal Structure Of Catalase Hpii From Escherichia 7e-07
4enr_A 753 Structure Of E530i Variant E. Coli Kate Length = 75 7e-07
3ttw_A 753 Structure Of The F413e Variant Of E. Coli Kate Leng 7e-07
4env_A 753 Structure Of The S234i Variant Of E. Coli Kate Leng 7e-07
1p81_A 753 Crystal Structure Of The D181e Variant Of Catalase 7e-07
4enw_A 753 Structure Of The S234n Variant Of E. Coli Kate Leng 7e-07
3ttx_A 753 Structure Of The F413k Variant Of E. Coli Kate Leng 7e-07
3ttu_A 753 Structure Of F413y/h128n Double Variant Of E. Coli 7e-07
3ttt_A 753 Structure Of F413y Variant Of E. Coli Kate Length = 7e-07
3p9s_A 753 Structure Of I274a Variant Of E. Coli Kate Length = 7e-07
3p9q_A 753 Structure Of I274c Variant Of E. Coli Kate Length = 7e-07
3p9p_A 753 Structure Of I274v Variant Of E. Coli Kate Length = 7e-07
1qf7_A 753 Structure Of The Mutant His392gln Of Catalase Hpii 7e-07
1ggh_A 753 Crystal Structure Of Catalase Hpii From Escherichia 7e-07
4ent_A 753 Structure Of The S234a Variant Of E. Coli Kate Leng 7e-07
3ttv_A 753 Structure Of The F413e Variant Of E. Coli Kate Leng 7e-07
1p80_A 753 Crystal Structure Of The D181q Variant Of Catalase 7e-07
1iph_A 753 Structure Of Catalase Hpii From Escherichia Coli Le 7e-07
4ens_A 753 Structure Of E530q Variant Of E. Coli Kate Length = 7e-07
4enq_A 753 Structure Of E530d Variant E. Coli Kate Length = 75 7e-07
4enp_A 753 Structure Of E530a Variant E. Coli Kate Length = 75 8e-07
4enu_A 753 Structure Of The S234d Variant Of E. Coli Kate Leng 8e-07
1ggj_A 753 Crystal Structure Of Catalase Hpii From Escherichia 8e-07
1ggk_A 753 Crystal Structure Of Catalase Hpii From Escherichia 8e-07
3p9r_A 753 Structure Of I274g Variant Of E. Coli Kate Length = 8e-07
1ye9_A226 Crystal Structure Of Proteolytically Truncated Cata 2e-06
1cf9_A 753 Structure Of The Mutant Val169cys Of Catalase Hpii 2e-06
1sy7_A 715 Crystal Structure Of The Catalase-1 From Neurospora 5e-06
1sy7_A 715 Crystal Structure Of The Catalase-1 From Neurospora 1e-04
4aue_A 717 Crystal Structure, Recombinant Expression And Mutag 7e-06
4aul_A 719 Crystal Structure, Recombinant Expression And Mutag 7e-06
4aum_A 719 Crystal Structure, Recombinant Expression And Mutag 8e-06
4aun_A 719 Crystal Structure, Recombinant Expression And Mutag 3e-05
2xf2_A 688 Pvc-At Length = 688 4e-05
2iuf_A 688 The Structures Of Penicillium Vitale Catalase: Rest 4e-05
3ej6_A 688 Neurospora Crassa Catalase-3 Crystal Structure Leng 1e-04
2j2m_A 491 Crystal Structure Analysis Of Catalase From Exiguob 2e-04
1m7s_A 484 Crystal Structure Analysis Of Catalase Catf Of Pseu 2e-04
>pdb|1QQW|A Chain A, Crystal Structure Of Human Erythrocyte Catalase Length = 527 Back     alignment and structure

Iteration: 1

Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 43/65 (66%), Positives = 53/65 (81%) Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111 ++T+Q IKNL V+ A L+ DPDY IRDL+N+IA GKYPS+TFYIQVMTF QAE + +N Sbjct: 236 YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFN 295 Query: 112 PFDLT 116 PFDLT Sbjct: 296 PFDLT 300
>pdb|1DGG|A Chain A, Human Erythrocyte Catalse Cyanide Complex Length = 497 Back     alignment and structure
>pdb|1DGH|B Chain B, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex Length = 498 Back     alignment and structure
>pdb|1DGH|A Chain A, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex Length = 498 Back     alignment and structure
>pdb|3NWL|A Chain A, The Crystal Structure Of The P212121 Form Of Bovine Liver Catalase Previously Characterized By Electron Microscopy Length = 527 Back     alignment and structure
>pdb|3RGP|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase Complexed With Nitric Oxide Length = 499 Back     alignment and structure
>pdb|7CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase Length = 506 Back     alignment and structure
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae Length = 488 Back     alignment and structure
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae Length = 488 Back     alignment and structure
>pdb|2ISA|A Chain A, Crystal Structure Of Vibrio Salmonicida Catalase Length = 483 Back     alignment and structure
>pdb|2ISA|A Chain A, Crystal Structure Of Vibrio Salmonicida Catalase Length = 483 Back     alignment and structure
>pdb|1H6N|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus Mirabilis Catalase By Directed Mutagenesis And Consequences For Nucleotide Reactivity Length = 484 Back     alignment and structure
>pdb|1H6N|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus Mirabilis Catalase By Directed Mutagenesis And Consequences For Nucleotide Reactivity Length = 484 Back     alignment and structure
>pdb|1H7K|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus Mirabilis Catalase By Directed Mutagenesis And Consequences For Nucleotide Reactivity Length = 483 Back     alignment and structure
>pdb|1H7K|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus Mirabilis Catalase By Directed Mutagenesis And Consequences For Nucleotide Reactivity Length = 483 Back     alignment and structure
>pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase For The Native Form Length = 484 Back     alignment and structure
>pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase For The Native Form Length = 484 Back     alignment and structure
>pdb|3HB6|A Chain A, Inactive Mutant H54f Of Proteus Mirabilis Catalase Length = 484 Back     alignment and structure
>pdb|3HB6|A Chain A, Inactive Mutant H54f Of Proteus Mirabilis Catalase Length = 484 Back     alignment and structure
>pdb|1E93|A Chain A, High Resolution Structure And Biochemical Properties Of A Recombinant Catalase Depleted In Iron Length = 484 Back     alignment and structure
>pdb|1E93|A Chain A, High Resolution Structure And Biochemical Properties Of A Recombinant Catalase Depleted In Iron Length = 484 Back     alignment and structure
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase Length = 505 Back     alignment and structure
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase Length = 505 Back     alignment and structure
>pdb|2XQ1|A Chain A, Crystal Structure Of Peroxisomal Catalase From The Yeast Hansenula Polymorpha Length = 509 Back     alignment and structure
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I Length = 505 Back     alignment and structure
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I Length = 505 Back     alignment and structure
>pdb|1SI8|A Chain A, Crystal Structure Of E. Faecalis Catalase Length = 484 Back     alignment and structure
>pdb|1GWH|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus Catalase Complexed With Nadph Length = 503 Back     alignment and structure
>pdb|1GWF|A Chain A, Compound Ii Structure Of Micrococcus Lysodeikticus Catalase Length = 503 Back     alignment and structure
>pdb|1HBZ|A Chain A, Catalase From Micrococcus Lysodeikticu Length = 498 Back     alignment and structure
>pdb|1P7Z|A Chain A, Crystal Structure Of The D181s Variant Of Catalase Hpii From E. Coli Length = 753 Back     alignment and structure
>pdb|1P7Y|A Chain A, Crystal Structure Of The D181a Variant Of Catalase Hpii From E. Coli Length = 753 Back     alignment and structure
>pdb|1QWS|A Chain A, Structure Of The D181n Variant Of Catalase Hpii From E. Coli Length = 753 Back     alignment and structure
>pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli, His128asn Variant. Length = 753 Back     alignment and structure
>pdb|4ENR|A Chain A, Structure Of E530i Variant E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3TTW|A Chain A, Structure Of The F413e Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|4ENV|A Chain A, Structure Of The S234i Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|1P81|A Chain A, Crystal Structure Of The D181e Variant Of Catalase Hpii From E. Coli Length = 753 Back     alignment and structure
>pdb|4ENW|A Chain A, Structure Of The S234n Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3TTX|A Chain A, Structure Of The F413k Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3TTU|A Chain A, Structure Of F413y/h128n Double Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3TTT|A Chain A, Structure Of F413y Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3P9S|A Chain A, Structure Of I274a Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3P9Q|A Chain A, Structure Of I274c Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3P9P|A Chain A, Structure Of I274v Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Catalase Hpii From E. Coli Length = 753 Back     alignment and structure
>pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli, His128ala Variant. Length = 753 Back     alignment and structure
>pdb|4ENT|A Chain A, Structure Of The S234a Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|3TTV|A Chain A, Structure Of The F413e Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|1P80|A Chain A, Crystal Structure Of The D181q Variant Of Catalase Hpii From E. Coli Length = 753 Back     alignment and structure
>pdb|1IPH|A Chain A, Structure Of Catalase Hpii From Escherichia Coli Length = 753 Back     alignment and structure
>pdb|4ENS|A Chain A, Structure Of E530q Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|4ENQ|A Chain A, Structure Of E530d Variant E. Coli Kate Length = 753 Back     alignment and structure
>pdb|4ENP|A Chain A, Structure Of E530a Variant E. Coli Kate Length = 753 Back     alignment and structure
>pdb|4ENU|A Chain A, Structure Of The S234d Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli, Asn201ala Variant. Length = 753 Back     alignment and structure
>pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli, Asn201his Variant. Length = 753 Back     alignment and structure
>pdb|3P9R|A Chain A, Structure Of I274g Variant Of E. Coli Kate Length = 753 Back     alignment and structure
>pdb|1YE9|A Chain A, Crystal Structure Of Proteolytically Truncated Catalase Hpii From E. Coli Length = 226 Back     alignment and structure
>pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Catalase Hpii From Escherichia Coli Length = 753 Back     alignment and structure
>pdb|1SY7|A Chain A, Crystal Structure Of The Catalase-1 From Neurospora Crassa, Native Structure At 1.75a Resolution. Length = 715 Back     alignment and structure
>pdb|1SY7|A Chain A, Crystal Structure Of The Catalase-1 From Neurospora Crassa, Native Structure At 1.75a Resolution. Length = 715 Back     alignment and structure
>pdb|4AUE|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis Studies Of The Bifunctional Catalase-phenol Oxidase From Scytalidium Thermophilum Length = 717 Back     alignment and structure
>pdb|4AUL|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis Studies Of The Bifunctional Catalase-phenol Oxidase From Scytalidium Thermophilum Length = 719 Back     alignment and structure
>pdb|4AUM|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis Studies Of The Bifunctional Catalase-phenol Oxidase From Scytalidium Thermophilum Length = 719 Back     alignment and structure
>pdb|4AUN|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis Studies Of The Bifunctional Catalase-phenol Oxidase From Scytalidium Thermophilum Length = 719 Back     alignment and structure
>pdb|2XF2|A Chain A, Pvc-At Length = 688 Back     alignment and structure
>pdb|2IUF|A Chain A, The Structures Of Penicillium Vitale Catalase: Resting State, Oxidised State (Compound I) And Complex With Aminotriazole Length = 688 Back     alignment and structure
>pdb|3EJ6|A Chain A, Neurospora Crassa Catalase-3 Crystal Structure Length = 688 Back     alignment and structure
>pdb|2J2M|A Chain A, Crystal Structure Analysis Of Catalase From Exiguobacterium Oxidotolerans Length = 491 Back     alignment and structure
>pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas Syringae Length = 484 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query116
2isa_A 483 Catalase; peroxidase, heme, oxidoreductase, iron, 5e-31
2isa_A 483 Catalase; peroxidase, heme, oxidoreductase, iron, 2e-28
1a4e_A 488 Catalase A; oxidoreductase, peroxidase; HET: HEM; 5e-31
1a4e_A 488 Catalase A; oxidoreductase, peroxidase; HET: HEM; 5e-28
2xq1_A 509 Peroxisomal catalase; oxidoreductase, hydrogen per 6e-31
2xq1_A 509 Peroxisomal catalase; oxidoreductase, hydrogen per 5e-28
1dgf_A 497 Catalase; heme, NADPH, hydrogen peroxide, oxidored 1e-30
1dgf_A 497 Catalase; heme, NADPH, hydrogen peroxide, oxidored 6e-28
1si8_A 484 Catalase; N-terminal ARM, anti-parallel beta-barre 1e-30
1si8_A 484 Catalase; N-terminal ARM, anti-parallel beta-barre 4e-28
1qwl_A 505 KATA catalase; beta barrel, azide complex, oxyferr 1e-30
1qwl_A 505 KATA catalase; beta barrel, azide complex, oxyferr 4e-28
1gwe_A 503 Catalase; oxidoreductase, hdyrogen-peroxide:hydrog 2e-30
1gwe_A 503 Catalase; oxidoreductase, hdyrogen-peroxide:hydrog 2e-25
1m7s_A 484 Catalase; beta barrel, alpha helical domain, oxido 2e-29
1m7s_A 484 Catalase; beta barrel, alpha helical domain, oxido 4e-25
2j2m_A 491 Catalase; functional class, oxidoreductase; HET: H 4e-29
2j2m_A 491 Catalase; functional class, oxidoreductase; HET: H 4e-27
3ttv_A 753 Catalase HPII; heme orientation, oxidoreductase; H 3e-26
3ttv_A 753 Catalase HPII; heme orientation, oxidoreductase; H 5e-25
3ej6_A 688 Catalase-3; heme, hydrogen iron, metal-binding, ox 1e-25
3ej6_A 688 Catalase-3; heme, hydrogen iron, metal-binding, ox 1e-24
1sy7_A 715 Catalase 1; heme oxidation, singlet oxygen, oxidor 2e-25
1sy7_A 715 Catalase 1; heme oxidation, singlet oxygen, oxidor 6e-25
2iuf_A 688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 2e-24
2iuf_A 688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 4e-16
3e4w_A 320 Putative uncharacterized protein; heme enzyme, cat 1e-23
3e4w_A320 Putative uncharacterized protein; heme enzyme, cat 2e-17
1u5u_A374 Allene oxide synthase-lipoxygenase protein; catala 5e-15
1u5u_A 374 Allene oxide synthase-lipoxygenase protein; catala 2e-12
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 6e-11
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 6e-10
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A* Length = 483 Back     alignment and structure
 Score =  113 bits (285), Expect = 5e-31
 Identities = 26/65 (40%), Positives = 36/65 (55%)

Query: 52  FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
           F + Q IKNL    A +L G+D +   RDL +SI    +P +T  +Q+M    A    +N
Sbjct: 214 FVSQQGIKNLSDAEAGELVGNDRESHQRDLLDSIDNQDFPKWTLKVQIMPEADAATVPYN 273

Query: 112 PFDLT 116
           PFDLT
Sbjct: 274 PFDLT 278


>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A* Length = 483 Back     alignment and structure
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1 Length = 488 Back     alignment and structure
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1 Length = 488 Back     alignment and structure
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta} Length = 509 Back     alignment and structure
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta} Length = 509 Back     alignment and structure
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A* Length = 497 Back     alignment and structure
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A* Length = 497 Back     alignment and structure
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1 Length = 484 Back     alignment and structure
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1 Length = 484 Back     alignment and structure
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A* Length = 505 Back     alignment and structure
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A* Length = 505 Back     alignment and structure
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A* Length = 503 Back     alignment and structure
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A* Length = 503 Back     alignment and structure
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1 Length = 484 Back     alignment and structure
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1 Length = 484 Back     alignment and structure
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans} Length = 491 Back     alignment and structure
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans} Length = 491 Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Length = 753 Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Length = 753 Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Length = 688 Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Length = 688 Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Length = 715 Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Length = 715 Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Length = 688 Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Length = 688 Back     alignment and structure
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A* Length = 320 Back     alignment and structure
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A* Length = 320 Back     alignment and structure
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2 Length = 374 Back     alignment and structure
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2 Length = 374 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query116
3ttv_A 753 Catalase HPII; heme orientation, oxidoreductase; H 100.0
3ej6_A 688 Catalase-3; heme, hydrogen iron, metal-binding, ox 100.0
2isa_A 483 Catalase; peroxidase, heme, oxidoreductase, iron, 100.0
2j2m_A 491 Catalase; functional class, oxidoreductase; HET: H 100.0
1qwl_A 505 KATA catalase; beta barrel, azide complex, oxyferr 100.0
1dgf_A 497 Catalase; heme, NADPH, hydrogen peroxide, oxidored 100.0
2xq1_A 509 Peroxisomal catalase; oxidoreductase, hydrogen per 100.0
1m7s_A 484 Catalase; beta barrel, alpha helical domain, oxido 100.0
1a4e_A 488 Catalase A; oxidoreductase, peroxidase; HET: HEM; 100.0
1si8_A 484 Catalase; N-terminal ARM, anti-parallel beta-barre 100.0
2iuf_A 688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 100.0
1gwe_A 503 Catalase; oxidoreductase, hdyrogen-peroxide:hydrog 100.0
1sy7_A 715 Catalase 1; heme oxidation, singlet oxygen, oxidor 100.0
3e4w_A320 Putative uncharacterized protein; heme enzyme, cat 100.0
1u5u_A374 Allene oxide synthase-lipoxygenase protein; catala 99.94
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 99.92
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Back     alignment and structure
Probab=100.00  E-value=2.7e-40  Score=286.77  Aligned_cols=116  Identities=37%  Similarity=0.586  Sum_probs=114.5

Q ss_pred             CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744           1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------   50 (116)
Q Consensus         1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------   50 (116)
                      |+|+|++|+++++||+|++|+++||+|||++|||+|+|++|+||+.||||                              
T Consensus       134 A~G~F~vt~d~s~~t~A~~F~~~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~k  213 (753)
T 3ttv_A          134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHK  213 (753)
T ss_dssp             EEEEEEESSCCTTTCCCGGGSCTTCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGG
T ss_pred             EEEEEEECCchhHHHhhhhhcCCCceeEEEEEecCCCCCCCCCccCCCCCcEEEEEEcCCCCcccccccCCccccCCHHH
Confidence            68999999999999999999999999999999999999999999999999                              


Q ss_pred             ------------------------------------------------------------------------------ee
Q psy8744          51 ------------------------------------------------------------------------------LF   52 (116)
Q Consensus        51 ------------------------------------------------------------------------------~~   52 (116)
                                                                                                    ||
T Consensus       214 Fpdfiha~k~~P~t~~~~~~~~~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~  293 (753)
T 3ttv_A          214 FPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHW  293 (753)
T ss_dssp             HHHHHHHHSCCTTTCCCTTCCCSHHHHHHHHHCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHHhhcCCccCCCCcccchHHHHHHHHhCHHHHHHHHHHhccCCCCCCcccCCcccccceEEEcCCCCEEEEEEEE
Confidence                                                                                          99


Q ss_pred             EeCccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744          53 RTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT  116 (116)
Q Consensus        53 ~p~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T  116 (116)
                      +|.||+++|+++||.++++++|||+++|||++|++|+||+|+|+||||+++|+++|+|||||+|
T Consensus       294 ~p~~G~~~l~~~EA~~~~g~dpD~l~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~T  357 (753)
T 3ttv_A          294 KPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT  357 (753)
T ss_dssp             EETTCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHHTCCCEEEEEEEEEEGGGTTCSSSCTTCTT
T ss_pred             EECCCCCCCCHHHHHHhhCCCchHHHHHHHHHHhcCCCCeEEEEEEeechhhhhcCCCCCccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999998



>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Back     alignment and structure
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A* Back     alignment and structure
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans} Back     alignment and structure
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A* Back     alignment and structure
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A* Back     alignment and structure
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta} Back     alignment and structure
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1 Back     alignment and structure
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1 Back     alignment and structure
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1 Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Back     alignment and structure
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A* Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Back     alignment and structure
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A* Back     alignment and structure
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 116
d1p80a2 571 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, 7e-22
d1p80a2 571 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, 2e-19
d1a4ea_ 488 e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomy 2e-21
d1a4ea_ 488 e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomy 2e-19
d1e93a_ 476 e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 6e-21
d1e93a_ 476 e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 2e-18
d1si8a_ 474 e.5.1.1 (A:) Catalase I {Enterococcus faecalis [Ta 2e-20
d1si8a_ 474 e.5.1.1 (A:) Catalase I {Enterococcus faecalis [Ta 5e-19
d1qwla_ 491 e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxI 2e-20
d1qwla_ 491 e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxI 8e-18
d1dgfa_ 497 e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [Tax 2e-20
d1dgfa_ 497 e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [Tax 4e-20
d1gwea_ 498 e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus 4e-19
d1gwea_ 498 e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus 7e-17
d1m7sa_ 484 e.5.1.1 (A:) Catalase I {Pseudomonas syringae [Tax 4e-18
d1m7sa_ 484 e.5.1.1 (A:) Catalase I {Pseudomonas syringae [Tax 4e-18
d1u5ua_ 366 e.5.1.2 (A:) Allene oxide synthase-lipoxygenase pr 2e-13
d1u5ua_366 e.5.1.2 (A:) Allene oxide synthase-lipoxygenase pr 2e-07
>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII [TaxId: 562]} Length = 571 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Heme-dependent catalase-like
superfamily: Heme-dependent catalase-like
family: Heme-dependent catalases
domain: Catalase II
species: Escherichia coli, HPII [TaxId: 562]
 Score = 86.9 bits (215), Expect = 7e-22
 Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 1   AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
           A GYF+    ++  TKA   S   K T + VRFSTV G +GSADT R IR F      K 
Sbjct: 108 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRQIRGFA----TKF 163

Query: 61  LPVKRAEDLAG-SDPDYSIRD 80
              +   DL G + P + I+D
Sbjct: 164 YTEEGIFDLVGNNTPIFFIQD 184


>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII [TaxId: 562]} Length = 571 Back     information, alignment and structure
>d1a4ea_ e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 488 Back     information, alignment and structure
>d1a4ea_ e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 488 Back     information, alignment and structure
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]} Length = 476 Back     information, alignment and structure
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]} Length = 476 Back     information, alignment and structure
>d1si8a_ e.5.1.1 (A:) Catalase I {Enterococcus faecalis [TaxId: 1351]} Length = 474 Back     information, alignment and structure
>d1si8a_ e.5.1.1 (A:) Catalase I {Enterococcus faecalis [TaxId: 1351]} Length = 474 Back     information, alignment and structure
>d1qwla_ e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxId: 210]} Length = 491 Back     information, alignment and structure
>d1qwla_ e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxId: 210]} Length = 491 Back     information, alignment and structure
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId: 9606]} Length = 497 Back     information, alignment and structure
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId: 9606]} Length = 497 Back     information, alignment and structure
>d1gwea_ e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus [TaxId: 1270]} Length = 498 Back     information, alignment and structure
>d1gwea_ e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus [TaxId: 1270]} Length = 498 Back     information, alignment and structure
>d1m7sa_ e.5.1.1 (A:) Catalase I {Pseudomonas syringae [TaxId: 317]} Length = 484 Back     information, alignment and structure
>d1m7sa_ e.5.1.1 (A:) Catalase I {Pseudomonas syringae [TaxId: 317]} Length = 484 Back     information, alignment and structure
>d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} Length = 366 Back     information, alignment and structure
>d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} Length = 366 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query116
d1a4ea_ 488 Catalase I {Baker's yeast (Saccharomyces cerevisia 100.0
d1p80a2 571 Catalase II {Escherichia coli, HPII [TaxId: 562]} 100.0
d1qwla_ 491 Catalase I {Helicobacter pylori [TaxId: 210]} 100.0
d1dgfa_ 497 Catalase I {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1e93a_ 476 Catalase I {Proteus mirabilis [TaxId: 584]} 100.0
d1si8a_ 474 Catalase I {Enterococcus faecalis [TaxId: 1351]} 100.0
d1gwea_ 498 Catalase I {Micrococcus lysodeikticus [TaxId: 1270 100.0
d1m7sa_ 484 Catalase I {Pseudomonas syringae [TaxId: 317]} 100.0
d1u5ua_366 Allene oxide synthase-lipoxygenase protein, N-term 99.88
>d1a4ea_ e.5.1.1 (A:) Catalase I {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Heme-dependent catalase-like
superfamily: Heme-dependent catalase-like
family: Heme-dependent catalases
domain: Catalase I
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00  E-value=3.3e-39  Score=268.06  Aligned_cols=116  Identities=57%  Similarity=0.887  Sum_probs=114.5

Q ss_pred             CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744           1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------   50 (116)
Q Consensus         1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------   50 (116)
                      |+|+|++|+|+++||+|++|+++|++|||++|||+++|++|+||+.||||                              
T Consensus        62 A~G~F~~t~d~s~~t~a~~f~~~Gk~~PV~vRFSt~~G~~~s~D~~rd~RG~AiKf~t~eGn~DlV~nn~PvFfird~~~  141 (488)
T d1a4ea_          62 AFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSK  141 (488)
T ss_dssp             EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCTTH
T ss_pred             eEEEEEECCCchHHHhhHhhccCCcccceEEeeecCCCCCCCccccCCCCceEEEEEcCCCccceeecccCceecCCHHH
Confidence            68999999999999999999999999999999999999999999999999                              


Q ss_pred             ----------------------------------------------------------------------------eeEe
Q psy8744          51 ----------------------------------------------------------------------------LFRT   54 (116)
Q Consensus        51 ----------------------------------------------------------------------------~~~p   54 (116)
                                                                                                  ||+|
T Consensus       142 F~~fl~a~k~~p~t~~~d~~~~~df~s~p~~~es~~~~~~l~s~~~~P~sy~~~~~~g~htf~~vn~~G~~~~vK~~~~P  221 (488)
T d1a4ea_         142 FPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQVMILFSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKT  221 (488)
T ss_dssp             HHHHHHHHSCCTTTCSCCHHHHHHHHTSGGGGGGHHHHHHHHSGGGSBSCGGGCCEECCSCEEEECTTSCEEEEEEEEEE
T ss_pred             HHHHHHhcCCCCCCCCCChHHHHHHHhCCCchhhHHHHHHHhccCCCCCCcccccccccceEEEEccCCCEEEEEEEEEc
Confidence                                                                                        9999


Q ss_pred             CccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744          55 NQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT  116 (116)
Q Consensus        55 ~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T  116 (116)
                      .+|+++|+++||.++++++|||+.+|||++|++|++|+|+|+||||+++|+++++|||+|+|
T Consensus       222 ~~G~~~L~~eEA~~l~g~dpd~l~~DL~~~i~~g~~p~w~l~vQl~~~~d~~~~~~~i~D~T  283 (488)
T d1a4ea_         222 DQGIKNLTIEEATKIAGSNPDYCQQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLT  283 (488)
T ss_dssp             SSCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEECHHHHHTSSSCTTCTT
T ss_pred             CCCCCCCCHHHHHHhccCCccHHHHHHHHHHHcCCCceEEEEEEeeCHhHhhcCCCCCcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999998



>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII [TaxId: 562]} Back     information, alignment and structure
>d1qwla_ e.5.1.1 (A:) Catalase I {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]} Back     information, alignment and structure
>d1si8a_ e.5.1.1 (A:) Catalase I {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1gwea_ e.5.1.1 (A:) Catalase I {Micrococcus lysodeikticus [TaxId: 1270]} Back     information, alignment and structure
>d1m7sa_ e.5.1.1 (A:) Catalase I {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure
>d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein, N-terminal domain {Black sea rod (Plexaura homomalla) [TaxId: 47982]} Back     information, alignment and structure