Psyllid ID: psy8745

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------
Protein Sequence
MSSQSGAGLMFSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPRTYSNPDKQERYCSRAQSLTSSEPKITDRSLDHKAKIGRSEATTHAIESQKRQR
Secondary Structure (PSIPRED)
ccccccccccccccHHccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccEEEEEEccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccEEEEcccEEEEEccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHHHcccccEEEEcccHccccEEEEccccEEEEEEEEEccccccHEEHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccEEEEEcccEEEEEEccccccHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHcccHHHHHHHHHHcccccccHHHHHHHHHHccccccccEEEEHHHHcHHccc
Coil and Loop (DISEMBL)
mssqsgaglmFSSRFqalfpggvsqlqSDWQYIETALSktkspvvfchndlllgniiydetedkvTFIDYEyagvnyqafdianhfdefagvspidhsrypgpefqLSWLRTYLEeytgsppsphqlATLHWQvqqfspvahCFWTIWGLvqaehsdiefdffQYASSTYQGYvlkrdkylgtsppspqilhraglaprlyaefdnGLVYQYVRgvtitpdsirephihpLVARNMARLHKvhsnmktpklwstgkhmlsliprtysnpdkqerycsraqsltssepkitdrsldhkakigrseattHAIESQKRQR
Flexible Loop (DISEMBL)
MSSQSGAGLMFSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPrtysnpdkqERYCSRaqsltssepkitdrsldhkakigrseatthaiesqkrqr
Low Complexity Region (SEG)
MSSQSGAGLMFSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPRTYSNPDKQERYCSRAQSLTSSEPKITDRSLDHKAKIGRSEATTHAIESQKRQR
Disordered region (IsUnstruct)
**********FSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS***PHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSP*SPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLI*******************************************************
Disordered Region (DISOPRED)
************SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIP*************SRAQSLTSSEPKI**********IGRSEATTHA*ES*****
Disordered Region (DISEMBL)
********LMFSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPRTYSNP*******************ITDRSLDHKAKIGRSE*************
Disordered Region (DISPRO)
**S**GAGLMFSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPRTYSNPDKQERYCSRAQSLTSSEPKITDRSLDHKAKIGRSEATTHAIES*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSQSGAGLMFSSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPRTYSNPDKQERYCSRAQSLTSSEPKITDRSLDHKAKIGRSEATTHAIESQKRQR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	317	2.2.26 [Sep-21-2011]
A7MCT6	385	Ethanolamine kinase 2 OS=	yes	N/A	0.470	0.387	0.516	3e-42
D3ZRW8	385	Ethanolamine kinase 2 OS=	yes	N/A	0.470	0.387	0.516	5e-42
P54352	518	Ethanolamine kinase OS=Dr	yes	N/A	0.511	0.312	0.478	5e-41
Q9NVF9	386	Ethanolamine kinase 2 OS=	yes	N/A	0.492	0.404	0.466	1e-39
Q9HBU6	452	Ethanolamine kinase 1 OS=	no	N/A	0.466	0.327	0.496	2e-38
Q9D4V0	412	Ethanolamine kinase 1 (Fr	no	N/A	0.466	0.359	0.496	5e-37
Q869T9	349	Probable ethanolamine kin	yes	N/A	0.511	0.464	0.380	4e-32
A7SK27	349	Probable ethanolamine kin	N/A	N/A	0.454	0.412	0.453	1e-31
O55229	394	Choline/ethanolamine kina	no	N/A	0.498	0.401	0.337	5e-20
O54804	453	Choline kinase alpha OS=M	no	N/A	0.476	0.333	0.329	7e-20

>sp|A7MCT6|EKI2_MOUSE Ethanolamine kinase 2 OS=Mus musculus GN=Etnk2 PE=1 SV=1

 Score =  172 bits (436), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 104/151 (68%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  + +V FIDYEYAG NYQAFDI
Sbjct: 221 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGRVCFIDYEYAGYNYQAFDI 280

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+SRYP  E Q+ WLR YLE   G+  SP ++  L+ QV +F+  +H
Sbjct: 281 GNHFNEFAGVNVVDYSRYPARETQVQWLRYYLEAQKGTAASPREVERLYAQVNKFALASH 340

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
            FW +W L+Q ++S I FDF +YA   +  Y
Sbjct: 341 FFWALWALIQNQYSTISFDFLRYAVIRFNQY 371

Highly specific for ethanolamine phosphorylation. Does not have choline kinase activity.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 8EC: 2

>sp|D3ZRW8|EKI2_RAT Ethanolamine kinase 2 OS=Rattus norvegicus GN=Etnk2 PE=3 SV=1

 Score =  171 bits (434), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 102/151 (67%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  +  V FIDYEYAG NYQAFDI
Sbjct: 221 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGHVRFIDYEYAGYNYQAFDI 280

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+ RYP  E QL WLR YLE   G+  SP ++  L+ QV +F+  +H
Sbjct: 281 GNHFNEFAGVNEVDYCRYPAREIQLQWLRYYLEAQKGTAASPREVERLYAQVNKFALASH 340

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
            FW +W L+Q ++S I FDF +YA   +  Y
Sbjct: 341 FFWALWALIQNQYSTINFDFLRYAVIRFNQY 371

Highly specific for ethanolamine phosphorylation. Does not have choline kinase activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|P54352|EAS_DROME Ethanolamine kinase OS=Drosophila melanogaster GN=eas PE=1 SV=2

 Score =  168 bits (425), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 107/163 (65%), Gaps = 1/163 (0%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           + +L+ ++  +   L    SP+VF HNDLLLGN+IY ++ + V FIDYEYA  N+QAFDI
Sbjct: 350 IGRLREEFNKLYEYLEALDSPIVFSHNDLLLGNVIYTQSLNTVNFIDYEYADYNFQAFDI 409

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTG-SPPSPHQLATLHWQVQQFSPVA 141
            NHF E  GV  +D+SRYP  EFQL WLR YLEEY   S     ++  L+ QV QF+  +
Sbjct: 410 GNHFAEMCGVDEVDYSRYPKREFQLQWLRVYLEEYLQRSNIQNDEVELLYVQVNQFALAS 469

Query: 142 HCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTS 184
           H FWT+W L+QAEHS I+FD+  YA   Y  Y+ ++ ++L  +
Sbjct: 470 HIFWTVWSLLQAEHSTIDFDYVGYAFLRYNEYLARKVEFLSLT 512

Highly specific for ethanolamine phosphorylation. May be a rate-controlling step in phosphatidylethanolamine biosynthesis.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q9NVF9|EKI2_HUMAN Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=2 SV=3

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/163 (46%), Positives = 106/163 (65%), Gaps = 7/163 (4%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+ +SPVVFCHNDLL  NIIYD  +  V FIDYEYAG NYQAFDI
Sbjct: 222 VEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFIDYEYAGYNYQAFDI 281

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+  YP  E QL WL  YL+   G   +P ++  L+ QV +F+  +H
Sbjct: 282 GNHFNEFAGVNEVDYCLYPARETQLQWLHYYLQAQKGMAVTPREVQRLYVQVNKFALASH 341

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSP 185
            FW +W L+Q ++S I+FDF +YA       V++ ++Y    P
Sbjct: 342 FFWALWALIQNQYSTIDFDFLRYA-------VIRFNQYFKVKP 377

Highly specific for ethanolamine phosphorylation. Does not have choline kinase activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q9HBU6|EKI1_HUMAN Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=1 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/153 (49%), Positives = 98/153 (64%), Gaps = 5/153 (3%)

Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH 85
           LQ +  +++  LS   SPVV CHNDLL  NIIY+E +  V FIDYEY+G NY A+DI NH
Sbjct: 286 LQEEMTWMKEILSNLGSPVVLCHNDLLCKNIIYNEKQGDVQFIDYEYSGYNYLAYDIGNH 345

Query: 86  FDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT-----GSPPSPHQLATLHWQVQQFSPV 140
           F+EFAGVS +D+S YP  E Q  WLR YLE Y      G+  +  ++  L  QV QF+  
Sbjct: 346 FNEFAGVSDVDYSLYPDRELQSQWLRAYLEAYKEFKGFGTEVTEKEVEILFIQVNQFALA 405

Query: 141 AHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
           +H FW +W L+QA++S IEFDF  YA   +  Y
Sbjct: 406 SHFFWGLWALIQAKYSTIEFDFLGYAIVRFNQY 438

Highly specific for ethanolamine phosphorylation. May be a rate-controlling step in phosphatidylethanolamine biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q9D4V0|EKI1_MOUSE Ethanolamine kinase 1 (Fragment) OS=Mus musculus GN=Etnk1 PE=2 SV=1

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 76/153 (49%), Positives = 99/153 (64%), Gaps = 5/153 (3%)

Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH 85
           LQ +  +++  LS   SPVV CHNDLL  NIIY+E +  V FIDYEY+G NY A+DI NH
Sbjct: 246 LQEEMTWMKELLSSLGSPVVLCHNDLLCKNIIYNEKQGDVQFIDYEYSGYNYLAYDIGNH 305

Query: 86  FDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT-----GSPPSPHQLATLHWQVQQFSPV 140
           F+EFAGVS +D+S YP  E Q   +R+YLE Y      GS  +  ++ TL  QV QF+  
Sbjct: 306 FNEFAGVSDVDYSLYPDRELQGQCVRSYLEAYKEYKGFGSDVTEKEVETLFIQVNQFALA 365

Query: 141 AHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
           +H FW +W L+QA++S IEFDF  YA   +  Y
Sbjct: 366 SHFFWGLWALIQAKYSTIEFDFLGYAVVRFNQY 398

Highly specific for ethanolamine phosphorylation. May be a rate-controlling step in phosphatidylathanolamine biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q869T9|EKIA_DICDI Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1

 Score =  138 bits (348), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 101/163 (61%), Gaps = 1/163 (0%)

Query: 22  GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFD 81
            V ++  + + +E  L++  SP+VFCHNDLL GNIIYD +++  +FID+EYA  N++  +
Sbjct: 188 NVKKMIEEGKMLEQRLAQLNSPIVFCHNDLLSGNIIYDPSQNCASFIDFEYANYNFRGLE 247

Query: 82  IANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVA 141
           + NHF+E+AG  P D+S YP  E Q+ +L  Y      + P+  +L  L+ +  QFS  +
Sbjct: 248 LGNHFNEYAGFGP-DYSLYPNKESQIHFLTDYHRSLFKTEPTQDELEKLYIESNQFSLAS 306

Query: 142 HCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTS 184
           H +W  W +VQA +S I+FD+ +Y  + +  Y   RD++L  +
Sbjct: 307 HLYWGFWAIVQAMNSQIDFDYLEYGKARFDRYYETRDQFLNLN 349

Highly specific for ethanolamine phosphorylation. May be a rate-controlling step in phosphatidylethanolamine biosynthesis.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|A7SK27|EKI_NEMVE Probable ethanolamine kinase OS=Nematostella vectensis GN=etnk PE=3 SV=1

 Score =  137 bits (345), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 98/150 (65%), Gaps = 6/150 (4%)

Query: 41  KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRY 100
           +S +VF HNDLL  NIIY++ +D V  ID+EYA  N  A+DIANHF E+AGV  +D+S Y
Sbjct: 198 ESAIVFAHNDLLCKNIIYNKDKDSVCTIDFEYANPNPIAYDIANHFCEYAGVDEVDYSLY 257

Query: 101 PGPEFQLSWLRTYLE---EYTGSP---PSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE 154
           P  + Q+ +L +YL+   E  G     PS  ++  L+  V QF+  AH FW +WGLVQA 
Sbjct: 258 PQKDHQVKFLESYLKRAMELQGEKDVNPSSREIEKLYVHVNQFALAAHFFWGVWGLVQAH 317

Query: 155 HSDIEFDFFQYASSTYQGYVLKRDKYLGTS 184
           +S+I+FDF +YA +    Y L+++K+L  +
Sbjct: 318 YSEIDFDFLEYAITRLNEYYLRKEKFLSLT 347

Highly specific for ethanolamine phosphorylation. May be a rate-controlling step in phosphatidylethanolamine biosynthesis.

Nematostella vectensis (taxid: 45351)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|O55229|CHKB_MOUSE Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3

 Score = 98.6 bits (244), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 23/181 (12%)

Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIY---DETEDKVTFIDYEYAGVNYQAFDI 82
           L+ +   +   L  T SPVVFCHND+  GNI+     +++D +  +D+EY+  NY+ FDI
Sbjct: 218 LKDEMNSLRKLLDDTPSPVVFCHNDIQEGNILLLSEPDSDDNLMLVDFEYSSYNYRGFDI 277

Query: 83  ANHFDE-----------FAGVSPIDHSRYPGPEFQLSWLRTYLEEY-----TGSPPSPHQ 126
            NHF E           F    P D   YP  E QL ++R YL E              +
Sbjct: 278 GNHFCEWVYDYTYEEWPFYKARPTD---YPTREQQLHFIRHYLAEVQKGEILSEEEQKKR 334

Query: 127 LATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPP 186
              L  ++ ++S  +H FW +W  +QA  S IEF + +YA S +Q Y  ++ + L +SP 
Sbjct: 335 EEELLLEISRYSLASHFFWGLWSTLQASMSTIEFGYLEYAQSRFQFYFQQKGQ-LTSSPS 393

Query: 187 S 187
           S
Sbjct: 394 S 394

Has a key role in phospholipid biosynthesis. Catalyzes the first step in phosphatidylethanolamine biosynthesis. Phosphorylates ethanolamine, and can also act on choline (in vitro). Has higher activity with ethanolamine. May not significantly contribute to in vivo phosphatidylcholine biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|O54804|CHKA_MOUSE Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=3

 Score = 98.2 bits (243), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 19/170 (11%)

Query: 29  DWQYIETALSKTKSPVVFCHNDLLLGNIIYDETED-----KVTFIDYEYAGVNYQAFDIA 83
           + + + + L  T+SPVVFCHND   GNI+  E ++     K+  ID+EY+  NY+ FDI 
Sbjct: 281 ELENLRSLLQYTRSPVVFCHNDCQEGNILLLEGQENSERRKLMLIDFEYSSYNYRGFDIG 340

Query: 84  NHFDEFA--------GVSPIDHSRYPGPEFQLSWLRTYLEEYTG---SPPSPHQLAT--- 129
           NHF E+              +  +YP  + QL ++ +YL  +     S  S  Q AT   
Sbjct: 341 NHFCEWMYDYTYEKYPFFRANIQKYPSRKQQLHFISSYLTTFQNDFESLSSEEQFATKED 400

Query: 130 LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDK 179
           +  +V +F+  +H  W +W +VQA+ S IEF + +YA + ++ Y  ++ K
Sbjct: 401 MLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMEYAQARFEAYFDQKRK 450

Has a key role in phospholipid biosynthesis and may contribute to tumor cell growth. Catalyzes the first step in phosphatidylcholine biosynthesis. Contributes to phosphatidylethanolamine biosynthesis. Phosphorylates choline and ethanolamine. Has higher activity with choline.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 8

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
347962999	370	AGAP000010-PA [Anopheles gambiae str. PE	0.536	0.459	0.517	6e-46
157124108	362	choline/ethanolamine kinase [Aedes aegyp	0.539	0.472	0.491	3e-45
170040492	357	choline/ethanolamine kinase [Culex quinq	0.539	0.478	0.523	6e-45
91094495	347	PREDICTED: similar to choline/ethanolami	0.485	0.443	0.535	3e-42
37786753	312	putative ethanolamine kinase, partial [M	0.492	0.5	0.496	4e-41
354487289	375	PREDICTED: ethanolamine kinase 2-like [C	0.514	0.434	0.484	4e-41
148707701	300	ethanolamine kinase 2, isoform CRA_a [Mu	0.492	0.52	0.490	5e-41
344246136	720	Renin [Cricetulus griseus]	0.511	0.225	0.487	7e-41
148707702	357	ethanolamine kinase 2, isoform CRA_b [Mu	0.470	0.417	0.516	1e-40
322802021	351	hypothetical protein SINV_14682 [Solenop	0.504	0.455	0.475	1e-40

>gi|347962999|ref|XP_311150.5| AGAP000010-PA [Anopheles gambiae str. PEST] gi|333467406|gb|EAA06461.5| AGAP000010-PA [Anopheles gambiae str. PEST]

 Score =  190 bits (483), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 2/172 (1%)

Query: 12  SSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYE 71
             R   +FP  V+QL+++++ +   L  T SPVVFCHNDLLLGN+IYDE   +VTFIDYE
Sbjct: 194 DERVWKVFPS-VAQLRNEFEELYGRLLATDSPVVFCHNDLLLGNVIYDERNARVTFIDYE 252

Query: 72  YAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY-TGSPPSPHQLATL 130
           YAG N+QAFDI NHF EFAG+  ID+ RYP PEFQ  WLR YL+EY  G+P +   +  L
Sbjct: 253 YAGPNHQAFDIGNHFTEFAGIDEIDYGRYPTPEFQRRWLRVYLQEYGKGTPVTDVAVQRL 312

Query: 131 HWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLG 182
           + QV Q++  +H  W+IW L+QAEHS I+FDF Q+ ++ +  Y  ++D +L 
Sbjct: 313 YVQVNQYALASHFLWSIWALIQAEHSTIDFDFVQFGATRFLEYRQRKDNFLA 364

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124108|ref|XP_001660334.1| choline/ethanolamine kinase [Aedes aegypti] gi|108874105|gb|EAT38330.1| AAEL009765-PA [Aedes aegypti]

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/173 (49%), Positives = 114/173 (65%), Gaps = 2/173 (1%)

Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEY 72
           SR   +FP    +L+ D+  +   L +  SP VFCHNDLLLGN+IY    D+VTFIDYEY
Sbjct: 188 SRISQIFPK-TDELRRDFDELYKRLKQLNSPTVFCHNDLLLGNVIYSADRDQVTFIDYEY 246

Query: 73  AGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS-PPSPHQLATLH 131
           A  N+QAFDI NHF EFAG+  ID+ RYP  +FQL WLR YLEE+ G    +   +  L+
Sbjct: 247 AAYNHQAFDIGNHFTEFAGIDEIDYDRYPAKDFQLRWLRVYLEEFNGEGECTDSDVQRLY 306

Query: 132 WQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTS 184
            QV QF+  +H  W +W L+QAEHS I+FDF Q+  + Y+ Y+ +RD++L  +
Sbjct: 307 VQVNQFALASHFLWAVWALIQAEHSTIDFDFIQFGETRYREYLRRRDEFLSLT 359

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170040492|ref|XP_001848031.1| choline/ethanolamine kinase [Culex quinquefasciatus] gi|167864115|gb|EDS27498.1| choline/ethanolamine kinase [Culex quinquefasciatus]

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 117/172 (68%), Gaps = 1/172 (0%)

Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEY 72
           +R  A+FP   ++L+ D+  +   L +  SP VFCHNDLLLGN+IY+    +VTFIDYEY
Sbjct: 184 ARISAIFPSA-AELRRDFDDLYGKLQQLGSPTVFCHNDLLLGNVIYNADRGQVTFIDYEY 242

Query: 73  AGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHW 132
           A  N+QAFDI NHF EFAG+  ID+ RYP  EFQL WLR YLEE+TG P S   +  L+ 
Sbjct: 243 ACFNHQAFDIGNHFTEFAGIDEIDYGRYPEREFQLRWLRVYLEEFTGGPCSDSDVERLYV 302

Query: 133 QVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTS 184
           QV QF+  AH  W IW L+QAEHS I+FDF Q+  + Y+ Y  +RD++L  +
Sbjct: 303 QVNQFALSAHFLWAIWALIQAEHSTIDFDFIQFGQNRYEEYRRRRDEFLALT 354

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094495|ref|XP_971312.1| PREDICTED: similar to choline/ethanolamine kinase [Tribolium castaneum] gi|270000736|gb|EEZ97183.1| hypothetical protein TcasGA2_TC004370 [Tribolium castaneum]

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 83/155 (53%), Positives = 106/155 (68%), Gaps = 1/155 (0%)

Query: 25  QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIAN 84
           QL+ ++ +++  LSK K P+VFCHNDLLLGN+IY+  +D+VTFIDYEYA  NYQAFDIAN
Sbjct: 189 QLEQEFSFLQRNLSKEKCPIVFCHNDLLLGNVIYNSEKDQVTFIDYEYANYNYQAFDIAN 248

Query: 85  HFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCF 144
           HF EFAGV  +D+  YP  EFQ+ WL  YL E+     S  QL  L  QV +F+  +H F
Sbjct: 249 HFLEFAGVENVDYGNYPTREFQIFWLGCYLNEFQ-PDASQSQLELLLNQVDKFTLASHLF 307

Query: 145 WTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDK 179
           W IW L+Q EHSDI FDF  YA   +  Y  K+++
Sbjct: 308 WGIWALIQTEHSDIAFDFLGYAVIRFNEYFKKKEQ 342

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|37786753|gb|AAP47267.1| putative ethanolamine kinase, partial [Mus musculus]

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 109/163 (66%), Gaps = 7/163 (4%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  + +V FIDYEYAG NYQAFDI
Sbjct: 148 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGRVCFIDYEYAGYNYQAFDI 207

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+SRYP  E Q+ WLR YLE   G+  SP ++  L+ QV +FS  +H
Sbjct: 208 GNHFNEFAGVNEVDYSRYPARETQVQWLRYYLEAQKGTAASPREVERLYAQVNKFSLASH 267

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSP 185
            FW +W L+Q ++S I FDF +YA       V++ ++Y    P
Sbjct: 268 FFWALWALIQNQYSTISFDFLRYA-------VIRFNQYFKVKP 303

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354487289|ref|XP_003505806.1| PREDICTED: ethanolamine kinase 2-like [Cricetulus griseus]

 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 80/165 (48%), Positives = 108/165 (65%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+ +SPVVFCHNDLL  NIIYD T+  V FIDYEYAG NYQAFDI
Sbjct: 211 VEVLEQELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDI 270

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+ RYP  E QL WLR YLE   G+  +P ++  L+ QV +F+  +H
Sbjct: 271 GNHFNEFAGVNEVDYCRYPARETQLQWLRYYLEAQKGTAATPREVERLYAQVNKFALASH 330

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPS 187
            FW +W L+Q ++S I FDF +YA   +  Y   + + L    P 
Sbjct: 331 FFWALWALIQNQYSTISFDFLRYAVIRFNQYFKVKPQVLALEMPK 375

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148707701|gb|EDL39648.1| ethanolamine kinase 2, isoform CRA_a [Mus musculus]

 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 80/163 (49%), Positives = 109/163 (66%), Gaps = 7/163 (4%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  + +V FIDYEYAG NYQAFDI
Sbjct: 136 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGRVCFIDYEYAGYNYQAFDI 195

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+SRYP  E Q+ WLR YLE   G+  SP ++  L+ QV +F+  +H
Sbjct: 196 GNHFNEFAGVNVVDYSRYPARETQVQWLRYYLEAQKGTAASPREVERLYAQVNKFALASH 255

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSP 185
            FW +W L+Q ++S I FDF +YA       V++ ++Y    P
Sbjct: 256 FFWALWALIQNQYSTISFDFLRYA-------VIRFNQYFKVKP 291

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344246136|gb|EGW02240.1| Renin [Cricetulus griseus]

 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 108/164 (65%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+ +SPVVFCHNDLL  NIIYD T+  V FIDYEYAG NYQAFDI
Sbjct: 556 VEVLEQELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDI 615

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+ RYP  E QL WLR YLE   G+  +P ++  L+ QV +F+  +H
Sbjct: 616 GNHFNEFAGVNEVDYCRYPARETQLQWLRYYLEAQKGTAATPREVERLYAQVNKFALASH 675

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPP 186
            FW +W L+Q ++S I FDF +YA   +  Y   + + L    P
Sbjct: 676 FFWALWALIQNQYSTISFDFLRYAVIRFNQYFKVKPQVLALEMP 719

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148707702|gb|EDL39649.1| ethanolamine kinase 2, isoform CRA_b [Mus musculus]

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 104/151 (68%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  + +V FIDYEYAG NYQAFDI
Sbjct: 193 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGRVCFIDYEYAGYNYQAFDI 252

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
            NHF+EFAGV+ +D+SRYP  E Q+ WLR YLE   G+  SP ++  L+ QV +F+  +H
Sbjct: 253 GNHFNEFAGVNVVDYSRYPARETQVQWLRYYLEAQKGTAASPREVERLYAQVNKFALASH 312

Query: 143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
            FW +W L+Q ++S I FDF +YA   +  Y
Sbjct: 313 FFWALWALIQNQYSTISFDFLRYAVIRFNQY 343

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|322802021|gb|EFZ22558.1| hypothetical protein SINV_14682 [Solenopsis invicta]

 Score =  172 bits (437), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 77/162 (47%), Positives = 110/162 (67%), Gaps = 2/162 (1%)

Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEY 72
           ++F+ L P   + L+ ++Q +++ LS+  +P+VF HNDLLLGNI+Y++ + +V FIDYEY
Sbjct: 175 AKFEMLIPS-YAILEKEYQILKSTLSRVNNPIVFAHNDLLLGNILYNQKQSRVVFIDYEY 233

Query: 73  AGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPP-SPHQLATLH 131
             +NYQAFDIANHF EFAG    D+S YP   FQ  WL+ YL+ Y  +   S   +  L+
Sbjct: 234 TALNYQAFDIANHFAEFAGFDEPDYSLYPDKNFQKMWLKEYLQVYNATTNVSEKDVDELY 293

Query: 132 WQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
           WQV QF+P+ H FW  W ++Q+EHS+IEFDF  YA+  +  Y
Sbjct: 294 WQVTQFAPLPHFFWGCWAIIQSEHSNIEFDFLAYAAIRFNEY 335

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	317
MGI|MGI:2443760	385	Etnk2 "ethanolamine kinase 2"	0.476	0.392	0.516	2e-40
RGD|1305304	385	Etnk2 "ethanolamine kinase 2"	0.476	0.392	0.516	3.3e-40
UNIPROTKB|F1PGB2	321	ETNK2 "Uncharacterized protein	0.476	0.470	0.509	2.3e-39
FB|FBgn0000536	518	eas "easily shocked" [Drosophi	0.501	0.306	0.487	3.7e-39
ZFIN|ZDB-GENE-050320-154	366	zgc:113516 "zgc:113516" [Danio	0.507	0.439	0.469	1.3e-38
UNIPROTKB|F1S6B0	386	ETNK2 "Uncharacterized protein	0.476	0.391	0.496	1.6e-38
UNIPROTKB|F1MRD9	301	ETNK2 "Uncharacterized protein	0.476	0.501	0.496	3.4e-38
UNIPROTKB|Q9NVF9	386	ETNK2 "Ethanolamine kinase 2"	0.476	0.391	0.490	4.3e-38
UNIPROTKB|J3KP68	317	ETNK2 "Ethanolamine kinase 2"	0.476	0.476	0.490	4.3e-38
UNIPROTKB|B7Z1G7	208	ETNK2 "cDNA, FLJ79392, highly	0.476	0.725	0.490	4.3e-38

MGI|MGI:2443760 Etnk2 "ethanolamine kinase 2" [Mus musculus (taxid:10090)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 78/151 (51%), Positives = 104/151 (68%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  + +V FIDYEYAG NYQAFDI
Sbjct:   221 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGRVCFIDYEYAGYNYQAFDI 280

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+SRYP  E Q+ WLR YLE   G+  SP ++  L+ QV +F+  +H
Sbjct:   281 GNHFNEFAGVNVVDYSRYPARETQVQWLRYYLEAQKGTAASPREVERLYAQVNKFALASH 340

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
              FW +W L+Q ++S I FDF +YA   +  Y
Sbjct:   341 FFWALWALIQNQYSTISFDFLRYAVIRFNQY 371

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0001890 "placenta development" evidence=IMP

GO:0004103 "choline kinase activity" evidence=IDA

GO:0004305 "ethanolamine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IMP

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IMP

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

RGD|1305304 Etnk2 "ethanolamine kinase 2" [Rattus norvegicus (taxid:10116)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 78/151 (51%), Positives = 102/151 (67%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD  +  V FIDYEYAG NYQAFDI
Sbjct:   221 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSDKGHVRFIDYEYAGYNYQAFDI 280

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+ RYP  E QL WLR YLE   G+  SP ++  L+ QV +F+  +H
Sbjct:   281 GNHFNEFAGVNEVDYCRYPAREIQLQWLRYYLEAQKGTAASPREVERLYAQVNKFALASH 340

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
              FW +W L+Q ++S I FDF +YA   +  Y
Sbjct:   341 FFWALWALIQNQYSTINFDFLRYAVIRFNQY 371

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0004305 "ethanolamine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

UNIPROTKB|F1PGB2 ETNK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 77/151 (50%), Positives = 102/151 (67%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD T+  V FIDYEYAG NYQAFDI
Sbjct:   157 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDI 216

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+  YPG + QL WLR YL+   G   +P ++  L+ QV +F+  +H
Sbjct:   217 GNHFNEFAGVNEVDYCWYPGRDTQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASH 276

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
              FW +W L+Q + S IEFDF +YA   +  Y
Sbjct:   277 FFWALWALIQNQFSTIEFDFLRYAVIRFHQY 307

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

FB|FBgn0000536 eas "easily shocked" [Drosophila melanogaster (taxid:7227)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 78/160 (48%), Positives = 106/160 (66%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             + +L+ ++  +   L    SP+VF HNDLLLGN+IY ++ + V FIDYEYA  N+QAFDI
Sbjct:   350 IGRLREEFNKLYEYLEALDSPIVFSHNDLLLGNVIYTQSLNTVNFIDYEYADYNFQAFDI 409

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTG-SPPSPHQLATLHWQVQQFSPVA 141
              NHF E  GV  +D+SRYP  EFQL WLR YLEEY   S     ++  L+ QV QF+  +
Sbjct:   410 GNHFAEMCGVDEVDYSRYPKREFQLQWLRVYLEEYLQRSNIQNDEVELLYVQVNQFALAS 469

Query:   142 HCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYL 181
             H FWT+W L+QAEHS I+FD+  YA   Y  Y+ ++ ++L
Sbjct:   470 HIFWTVWSLLQAEHSTIDFDYVGYAFLRYNEYLARKVEFL 509

GO:0004305 "ethanolamine kinase activity" evidence=NAS;IDA

GO:0004103 "choline kinase activity" evidence=NAS;TAS

GO:0009612 "response to mechanical stimulus" evidence=IGI;IMP

GO:0007638 "mechanosensory behavior" evidence=IMP

GO:0007420 "brain development" evidence=IMP

GO:0016310 "phosphorylation" evidence=NAS

GO:0016319 "mushroom body development" evidence=IMP;TAS

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=NAS

GO:0008306 "associative learning" evidence=TAS

GO:0046959 "habituation" evidence=TAS

GO:0007616 "long-term memory" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0055059 "asymmetric neuroblast division" evidence=IMP

GO:0001666 "response to hypoxia" evidence=IDA

GO:0046337 "phosphatidylethanolamine metabolic process" evidence=IDA

ZFIN|ZDB-GENE-050320-154 zgc:113516 "zgc:113516" [Danio rerio (taxid:7955)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 78/166 (46%), Positives = 109/166 (65%)

Query:    26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH 85
             +  + + +++ L++  SPVV CHNDLL  N+IY++ E  V FIDYEYA  NYQA+DI NH
Sbjct:   201 IMREMEELKSHLARINSPVVLCHNDLLTKNVIYNQEEGAVKFIDYEYADFNYQAYDIGNH 260

Query:    86 FDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY----TG-SPPSPHQLATLHWQVQQFSPV 140
             F+EFAG+  +D S YP  E Q  WL  YLE +    TG S  +  ++  L+ QV QFS V
Sbjct:   261 FNEFAGIDNVDSSLYPSDELQFDWLSAYLESFKRCSTGDSAVTQTEVQELYEQVCQFSLV 320

Query:   141 AHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPP 186
             AH FW +W L+QA+HS I+FDF +YA + +  Y  K+ ++ G +PP
Sbjct:   321 AHLFWCLWALLQAKHSTIDFDFQRYARARFNYYFEKKREFCGLTPP 366

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1S6B0 ETNK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 75/151 (49%), Positives = 101/151 (66%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+  SPVVFCHNDLL  NIIYD T+  V FIDYEYAG NYQAFDI
Sbjct:   222 VEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDI 281

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+  YP  E QL WLR YL+   G   +P ++  L+ QV +F+  +H
Sbjct:   282 GNHFNEFAGVNEVDYCLYPSRETQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASH 341

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
               W +W L+Q++ S I+FDF +YA   +  Y
Sbjct:   342 FLWALWALIQSQFSTIDFDFLRYAVIRFNQY 372

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0004305 "ethanolamine kinase activity" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

UNIPROTKB|F1MRD9 ETNK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 75/151 (49%), Positives = 101/151 (66%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  L    SPVVFCHNDLL  NIIYD ++  V FIDYEYAG NYQAFDI
Sbjct:   137 VGVLERELVWLKEHLPPLDSPVVFCHNDLLCKNIIYDSSKGHVRFIDYEYAGYNYQAFDI 196

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+SRYP  E QL WLR YL+   G+  +P ++  L+ QV +F+  +H
Sbjct:   197 GNHFNEFAGVNEVDYSRYPARETQLLWLRYYLQAQNGTAVTPREVERLYVQVNKFALASH 256

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
               W +W L+Q + S I+FDF +YA   +  Y
Sbjct:   257 FLWALWALIQNQFSTIDFDFLRYAVIRFNQY 287

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0004305 "ethanolamine kinase activity" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

UNIPROTKB|Q9NVF9 ETNK2 "Ethanolamine kinase 2" [Homo sapiens (taxid:9606)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 74/151 (49%), Positives = 101/151 (66%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+ +SPVVFCHNDLL  NIIYD  +  V FIDYEYAG NYQAFDI
Sbjct:   222 VEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFIDYEYAGYNYQAFDI 281

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+  YP  E QL WL  YL+   G   +P ++  L+ QV +F+  +H
Sbjct:   282 GNHFNEFAGVNEVDYCLYPARETQLQWLHYYLQAQKGMAVTPREVQRLYVQVNKFALASH 341

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
              FW +W L+Q ++S I+FDF +YA   +  Y
Sbjct:   342 FFWALWALIQNQYSTIDFDFLRYAVIRFNQY 372

GO:0005524 "ATP binding" evidence=IEA

GO:0004305 "ethanolamine kinase activity" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA;TAS

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046474 "glycerophospholipid biosynthetic process" evidence=TAS

UNIPROTKB|J3KP68 ETNK2 "Ethanolamine kinase 2" [Homo sapiens (taxid:9606)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 74/151 (49%), Positives = 101/151 (66%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+ +SPVVFCHNDLL  NIIYD  +  V FIDYEYAG NYQAFDI
Sbjct:   153 VEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFIDYEYAGYNYQAFDI 212

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+  YP  E QL WL  YL+   G   +P ++  L+ QV +F+  +H
Sbjct:   213 GNHFNEFAGVNEVDYCLYPARETQLQWLHYYLQAQKGMAVTPREVQRLYVQVNKFALASH 272

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
              FW +W L+Q ++S I+FDF +YA   +  Y
Sbjct:   273 FFWALWALIQNQYSTIDFDFLRYAVIRFNQY 303

GO:0016301 "kinase activity" evidence=IEA

GO:0046474 "glycerophospholipid biosynthetic process" evidence=IEA

UNIPROTKB|B7Z1G7 ETNK2 "cDNA, FLJ79392, highly similar to Ethanolamine kinase 2 (EC 2.7.1.82)" [Homo sapiens (taxid:9606)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 74/151 (49%), Positives = 101/151 (66%)

Query:    23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             V  L+ +  +++  LS+ +SPVVFCHNDLL  NIIYD  +  V FIDYEYAG NYQAFDI
Sbjct:    44 VEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFIDYEYAGYNYQAFDI 103

Query:    83 ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAH 142
              NHF+EFAGV+ +D+  YP  E QL WL  YL+   G   +P ++  L+ QV +F+  +H
Sbjct:   104 GNHFNEFAGVNEVDYCLYPARETQLQWLHYYLQAQKGMAVTPREVQRLYVQVNKFALASH 163

Query:   143 CFWTIWGLVQAEHSDIEFDFFQYASSTYQGY 173
              FW +W L+Q ++S I+FDF +YA   +  Y
Sbjct:   164 FFWALWALIQNQYSTIDFDFLRYAVIRFNQY 194

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001890 "placenta development" evidence=IEA

GO:0004305 "ethanolamine kinase activity" evidence=IEA

GO:0006646 "phosphatidylethanolamine biosynthetic process" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
D3ZRW8	EKI2_RAT	2, ., 7, ., 1, ., 8, 2	0.5165	0.4700	0.3870	yes	N/A
A7MCT6	EKI2_MOUSE	2, ., 7, ., 1, ., 8, 2	0.5165	0.4700	0.3870	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	317
cd05157	235	cd05157, ETNK_euk, Ethanolamine kinase (ETNK) in e	6e-37
PLN02236	344	PLN02236, PLN02236, choline kinase	9e-37
PLN02421	330	PLN02421, PLN02421, phosphotransferase, alcohol gr	1e-36
cd05156	302	cd05156, ChoK_euk, Choline Kinase (ChoK) in eukary	4e-31
pfam01633	206	pfam01633, Choline_kinase, Choline/ethanolamine ki	4e-30
cd05157	235	cd05157, ETNK_euk, Ethanolamine kinase (ETNK) in e	7e-22
PTZ00296	442	PTZ00296, PTZ00296, choline kinase; Provisional	2e-19
cd05151	170	cd05151, ChoK, Choline Kinase (ChoK)	3e-16
pfam01633	206	pfam01633, Choline_kinase, Choline/ethanolamine ki	2e-14
COG0510	269	COG0510, ycfN, Thiamine kinase and related kinases	2e-12
cd05156	302	cd05156, ChoK_euk, Choline Kinase (ChoK) in eukary	1e-11
PTZ00384	383	PTZ00384, PTZ00384, choline kinase; Provisional	7e-10
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	1e-08
PLN02421	330	PLN02421, PLN02421, phosphotransferase, alcohol gr	2e-08
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	7e-07
TIGR02906	313	TIGR02906, spore_CotS, spore coat protein, CotS fa	1e-04
cd05151	170	cd05151, ChoK, Choline Kinase (ChoK)	2e-04
PLN02236	344	PLN02236, PLN02236, choline kinase	8e-04

>gnl|CDD|240178 cd05157, ETNK_euk, Ethanolamine kinase (ETNK) in eukaryotes

 Score =  131 bits (332), Expect = 6e-37
 Identities = 45/87 (51%), Positives = 58/87 (66%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
             QL+ +  +++  LS   SP+VFCHNDLL GNIIY+E ++ V FIDYEYAG NY+AFDI
Sbjct: 149 FEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDI 208

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSW 109
           ANHF+E+AG     +   P  E Q   
Sbjct: 209 ANHFNEWAGFDCDYYLYPPKEEQQAFI 235

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryonic development. It may also have a role in testicular maturation. Length = 235

>gnl|CDD|177880 PLN02236, PLN02236, choline kinase

 Score =  134 bits (338), Expect = 9e-37
 Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 7/156 (4%)

Query: 33  IETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAG- 91
           +E  LS     + FCHNDL  GNI+ DE    +T IDYEYA  N  A+DIANHF E A  
Sbjct: 189 LEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAYDIANHFCEMAAD 248

Query: 92  ---VSP--IDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWT 146
               +P  +D+S+YPG E +  ++RTYL   +G  PS  ++  L   V++++  +H FW 
Sbjct: 249 YHSETPHILDYSKYPGEEERRRFIRTYL-SSSGEEPSDEEVEQLLDDVEKYTLASHLFWG 307

Query: 147 IWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLG 182
           +WG++    + I+FD+ +YA   ++ Y L++ + LG
Sbjct: 308 LWGIISGHVNKIDFDYMEYARQRFEQYWLRKPELLG 343

Length = 344

>gnl|CDD|215231 PLN02421, PLN02421, phosphotransferase, alcohol group as acceptor/kinase

 Score =  133 bits (337), Expect = 1e-36
 Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 1/141 (0%)

Query: 41  KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRY 100
           K+PVVF HNDLL GN++ +E E K+ FID+EY   +Y+ +DI NHF+E+AG    D+S Y
Sbjct: 179 KAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHFNEYAGFD-CDYSLY 237

Query: 101 PGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEF 160
           P  E Q  + R YL        S  +L  L  +   ++  +H +W IW +VQA+ S I+F
Sbjct: 238 PSKEEQYHFFRHYLRPDDPEEVSDAELEELFVETNFYALASHLYWAIWAIVQAKMSPIDF 297

Query: 161 DFFQYASSTYQGYVLKRDKYL 181
           D+  Y    Y+ Y  +++K L
Sbjct: 298 DYLGYFFLRYKEYKRQKEKLL 318

Length = 330

>gnl|CDD|240177 cd05156, ChoK_euk, Choline Kinase (ChoK) in eukaryotes

 Score =  118 bits (297), Expect = 4e-31
 Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 15/135 (11%)

Query: 33  IETALSKTKSPVVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAGVNYQAFDIANHFDEF 89
           +E+   ++ SPVVFCHNDL  GNI+         K+  ID+EYA  NY+ FDIANHF E+
Sbjct: 168 LESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANHFCEW 227

Query: 90  AG--------VSPIDHSRYPGPEFQLSWLRTYLEEY----TGSPPSPHQLATLHWQVQQF 137
                        I   +YP  E +L+++  YL E             ++  L  +V+ F
Sbjct: 228 MYDYHDPEPPFFKIHEDKYPTEEQRLNFISAYLSESLKGKNSVEEREKEVKDLLEEVEIF 287

Query: 138 SPVAHCFWTIWGLVQ 152
           +P +H FW +WG++Q
Sbjct: 288 TPASHLFWALWGIIQ 302

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancers such as breast, lung, colon, prostate, neuroblastoma, and hepatic lymphoma. In mammalian cells, there are three ChoK isoforms (A-1, A-2, and B) which are active in homo or heterodimeric forms. Length = 302

>gnl|CDD|216617 pfam01633, Choline_kinase, Choline/ethanolamine kinase

 Score =  113 bits (284), Expect = 4e-30
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 6/89 (6%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           +  L+ +   +E  L   +SP+VFCHNDL  GNI+ D + +++  ID+EYA  NY+AFDI
Sbjct: 118 LEDLEKEINELEKLLENLESPIVFCHNDLQPGNILLDNSTNRLVLIDFEYASYNYRAFDI 177

Query: 83  ANHFDEFAGV------SPIDHSRYPGPEF 105
           ANHF E+AG          D+S YP  E 
Sbjct: 178 ANHFCEWAGDYHEPEPFKCDYSLYPTEEE 206

Choline kinase catalyzes the committed step in the synthesis of phosphatidylcholine by the CDP-choline pathway. This alignment covers the protein kinase portion of the protein. The divergence of this family makes it very difficult to create a model that specifically predicts choline/ethanolamine kinases only. However if [add Pfam ID here for Choline_kinase_C] is also present then it is definitely a member of this family. Length = 206

>gnl|CDD|240178 cd05157, ETNK_euk, Ethanolamine kinase (ETNK) in eukaryotes

 Score = 91.6 bits (228), Expect = 7e-22
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 9/121 (7%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVH----- 243
           ++L + GLAP+LYA F NGL+Y+++ G T+ P+ +R P I+ L+AR +A+LH +      
Sbjct: 50  KLLSKHGLAPKLYATFQNGLIYEFIPGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAI 109

Query: 244 --SNMKTPKLWSTGKHMLSLIPRTYSNPDKQER--YCSRAQSLTSSEPKITDRSLDHKAK 299
                  P LW T +  ++L+P  +  P+K ++       + L      + +      + 
Sbjct: 110 SSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLKELLSALNSP 169

Query: 300 I 300
           I
Sbjct: 170 I 170

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryonic development. It may also have a role in testicular maturation. Length = 235

>gnl|CDD|240350 PTZ00296, PTZ00296, choline kinase; Provisional

 Score = 87.6 bits (217), Expect = 2e-19
 Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 44  VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA-----GVSP---I 95
           +VFCHNDL   NII   T   +  ID+EY+G N+ A DIAN F E          P   I
Sbjct: 284 IVFCHNDLQENNII--NTNKCLRLIDFEYSGYNFLATDIANFFIETTIDYSVSHYPFFAI 341

Query: 96  DHSRYPGPEFQLSWLRTYLEEYTGSP---PSPHQLATLHWQVQQFSPVAHCFWTIWGLVQ 152
           D  +Y   E +  ++  YL  Y       P+P  +  +   V+  +  AH  W  W +++
Sbjct: 342 DKKKYISYENRKLFITAYLSNYLDKSLVVPNPKIIDQILEAVEVQALGAHLLWGFWSIIR 401

Query: 153 AEHSDI--EFDFFQYASSTYQGY 173
              +    EFDFF YA   ++ Y
Sbjct: 402 GYQTKSYNEFDFFLYAKERFKMY 424

Length = 442

>gnl|CDD|240172 cd05151, ChoK, Choline Kinase (ChoK)

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)

Query: 43  PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF 89
            +V CHNDLL GN + D+   ++  ID+EYAG+N   FD+AN F E 
Sbjct: 106 DLVPCHNDLLPGNFLLDD--GRLWLIDWEYAGMNDPLFDLANFFSEA 150

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Length = 170

>gnl|CDD|216617 pfam01633, Choline_kinase, Choline/ethanolamine kinase

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 190 ILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVH-SNMKT 248
           +L   GL P+LY  F NG V +++   T++ + +R+P I   +A+ +   H +     K+
Sbjct: 29  LLSERGLGPKLYGFFPNGRVEEFIPSRTLSAEDLRDPEISKKIAKRLREFHDIEPPGKKS 88

Query: 249 PKLWSTGKHMLS-LIPRTYSNPDKQERYCS 277
           P L+ T   +       T+ N +K +    
Sbjct: 89  PSLFDT---IRKWEAQITFENVNKSKGLKL 115

Choline kinase catalyzes the committed step in the synthesis of phosphatidylcholine by the CDP-choline pathway. This alignment covers the protein kinase portion of the protein. The divergence of this family makes it very difficult to create a model that specifically predicts choline/ethanolamine kinases only. However if [add Pfam ID here for Choline_kinase_C] is also present then it is definitely a member of this family. Length = 206

>gnl|CDD|223584 COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 27/136 (19%)

Query: 32  YIETALSKTKSPV-VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA 90
            +  AL +      V CHNDL  GN++  + +  +  ID+EYAG+N  AFD+A    E+ 
Sbjct: 140 ELRRALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGLNDPAFDLAALLSEY- 197

Query: 91  GVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGL 150
                    +   E +  +   YLE+Y        +   ++  +Q+F       W +W  
Sbjct: 198 ------IFNH--NELEDLY-SAYLEKY------GFEAVLIYKILQKF------LWYLWTK 236

Query: 151 VQAEHSDIEFDFFQYA 166
           +Q     I  DF  Y 
Sbjct: 237 LQ---EQILEDFGWYD 249

Length = 269

>gnl|CDD|240177 cd05156, ChoK_euk, Choline Kinase (ChoK) in eukaryotes

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS---- 244
             L    L P+LY  F NG + +++   T+T + +R+P I   +AR MA+LH +      
Sbjct: 55  ARLSERNLGPKLYGIFPNGRIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSP 114

Query: 245 --NMKTPKLWSTGKHMLSLIPRTYSNPDKQERY 275
                TP +W   K  L L        D     
Sbjct: 115 EERDLTPAIWKLLKQWLDLAETVIEIVDSDSEK 147

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancers such as breast, lung, colon, prostate, neuroblastoma, and hepatic lymphoma. In mammalian cells, there are three ChoK isoforms (A-1, A-2, and B) which are active in homo or heterodimeric forms. Length = 302

>gnl|CDD|173576 PTZ00384, PTZ00384, choline kinase; Provisional

 Score = 59.0 bits (143), Expect = 7e-10
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 32  YIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAG 91
           ++ T+ S T S V+FCHNDL   NI+  +    + FID+++AG NY  ++IAN F +   
Sbjct: 216 HLNTSNSITNS-VLFCHNDLFFTNIL--DFNQGIYFIDFDFAGFNYVGWEIANFFVKLYI 272

Query: 92  V--SPIDHSRYPGPEFQLS------WLRTYLEEYTGSP--PSPHQLATLHWQVQQFSPVA 141
           V   P            LS      ++  YL +  G    PS   +      ++  +   
Sbjct: 273 VYDPPTPPYFNSDDSLALSEEMKTIFVSVYLSQLLGKNVLPSDDLVKEFLQSLEIHTLGV 332

Query: 142 HCFWTIWGLVQAEHSDIEFDF 162
           + FWT WG+V  +    E   
Sbjct: 333 NLFWTYWGIVMNDKPKNELSK 353

Length = 383

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 45  VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF 86
           V CH DL  GNI+ D+    +  ID+EYAG    AFD+A   
Sbjct: 109 VLCHGDLHPGNILVDD-GKILGIIDWEYAGYGPPAFDLAAAL 149

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|215231 PLN02421, PLN02421, phosphotransferase, alcohol group as acceptor/kinase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 173 YVLKRDKYLGTSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLV 232
           YV+ R++ L         L  AG   +L   F NG++  ++   T+TP  +R+P +   +
Sbjct: 56  YVIDRERELQAIK----YLSAAGFGAKLLGVFGNGMIQSFINARTLTPSDMRKPKVAAEI 111

Query: 233 ARNMARLHKVH-SNMKTPKLWS-TGKHMLSLIPRTYSNPDKQERY 275
           A+ + RLH+V     K P+LW+   K         + +P+KQ++Y
Sbjct: 112 AKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKY 156

Length = 330

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 49.1 bits (117), Expect = 7e-07
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 15/101 (14%)

Query: 30  WQYIETALSKT--KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFD 87
           W+ +  AL       P+V  H DL  GN++ D        ID+E AG+   A+D+A+   
Sbjct: 149 WERLLAALLALLPALPLVLVHGDLHPGNLLVDPGGRVTGVIDFEDAGLGDPAYDLASLL- 207

Query: 88  EFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLA 128
                      R  G E     L  YL  Y G+ P P +L 
Sbjct: 208 -----------RSLGEELGAELLAAYLAAY-GAAPDPARLR 236

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|131952 TIGR02906, spore_CotS, spore coat protein, CotS family

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 38  SKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIAN 84
            + K    FCH D    NI+    +++V  ID++Y  ++    D+  
Sbjct: 181 KEAKKIRGFCHQDYAYHNILLK--DNEVYVIDFDYCTIDLPVRDLRK 225

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers [Cellular processes, Sporulation and germination]. Length = 313

>gnl|CDD|240172 cd05151, ChoK, Choline Kinase (ChoK)

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 189 QILHRAGLAPRLYA--EFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN 245
           ++   AG+ P+LY        L+ +++ G  +  +   +P     +A+ + +LH     
Sbjct: 47  KLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHSSPLP 105

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate and displays negligible activity towards N-methylated derivatives of Etn. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Length = 170

>gnl|CDD|177880 PLN02236, PLN02236, choline kinase

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 193 RAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM---KTP 249
           R G  PRL   F NG V +++   T++   +R+P I  L+A  +   H +  +M   K  
Sbjct: 95  RHGQGPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSL--DMPGPKNV 152

Query: 250 KLWSTGKHMLSLIPRTYSNPDKQE 273
            LW   ++ L       S  + +E
Sbjct: 153 LLWDRLRNWLKEAKNLCSPEEAKE 176

Length = 344

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	317
KOG4720|consensus	391		100.0
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	100.0
PTZ00296	442	choline kinase; Provisional	100.0
PLN02236	344	choline kinase	100.0
KOG2686|consensus	366		100.0
PTZ00384	383	choline kinase; Provisional	100.0
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	99.94
KOG4720|consensus	391		99.88
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	99.78
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	99.78
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	99.75
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	99.74
KOG2686|consensus	366		99.74
PRK10271	188	thiK thiamine kinase; Provisional	99.59
PTZ00296	442	choline kinase; Provisional	99.42
PTZ00384	383	choline kinase; Provisional	99.42
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	99.39
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	99.38
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	99.37
PLN02236	344	choline kinase	99.34
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	99.26
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	99.26
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.23
PRK05231	319	homoserine kinase; Provisional	99.22
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	99.18
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	99.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.07
PF01636	239	APH: Phosphotransferase enzyme family This family	99.05
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	99.02
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	98.99
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.92
COG2334	331	Putative homoserine kinase type II (protein kinase	98.91
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.85
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	98.85
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.8
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	98.77
PRK11768	325	serine/threonine protein kinase; Provisional	98.76
PRK12396	409	5-methylribose kinase; Reviewed	98.72
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	98.71
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	98.67
PLN02876	822	acyl-CoA dehydrogenase	98.57
PRK06149	972	hypothetical protein; Provisional	98.56
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.54
PRK06148	1013	hypothetical protein; Provisional	98.54
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.43
PLN02756	418	S-methyl-5-thioribose kinase	98.38
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	98.38
PRK10593	297	hypothetical protein; Provisional	98.35
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	98.22
TIGR02905	313	spore_yutH spore coat protein YutH. Members of thi	98.19
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	97.82
COG4857	408	Predicted kinase [General function prediction only	97.76
PRK14879	211	serine/threonine protein kinase; Provisional	97.7
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.67
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.44
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.37
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.3
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.09
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	97.09
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.88
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.75
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	96.72
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.59
PRK12274	218	serine/threonine protein kinase; Provisional	96.59
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	96.35
PRK09902	216	hypothetical protein; Provisional	96.31
COG3570	274	StrB Streptomycin 6-kinase [Defense mechanisms]	96.28
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	96.09
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	95.96
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.8
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.74
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	95.72
smart00090	237	RIO RIO-like kinase.	95.71
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.58
KOG0668|consensus	338		95.29
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.24
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	95.12
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	94.87
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	94.8
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	94.73
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	94.66
COG3231	266	Aph Aminoglycoside phosphotransferase [Translation	94.55
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	94.53
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	94.32
KOG0583|consensus	370		94.2
COG2187	337	Uncharacterized protein conserved in bacteria [Fun	94.11
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	94.09
KOG0983|consensus	391		94.04
KOG0984|consensus	282		93.77
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	93.74
KOG0667|consensus	586		93.6
KOG0658|consensus	364		93.56
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	93.55
COG0478	304	RIO-like serine/threonine protein kinase fused to	93.51
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	93.43
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	93.36
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	93.35
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	93.32
KOG0599|consensus	411		93.32
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	93.24
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	93.23
KOG0603|consensus	612		93.23
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	93.18
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	93.18
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	93.16
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	93.16
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	93.12
KOG0594|consensus	323		93.12
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	93.09
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	93.06
PRK09188	365	serine/threonine protein kinase; Provisional	93.03
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	93.01
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	92.98
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	92.94
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	92.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	92.89
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	92.85
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	92.84
PHA02882	294	putative serine/threonine kinase; Provisional	92.83
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	92.8
PTZ00263	329	protein kinase A catalytic subunit; Provisional	92.77
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	92.74
PRK10345	210	hypothetical protein; Provisional	92.71
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	92.69
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	92.68
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	92.67
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	92.64
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	92.59
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	92.53
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	92.53
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	92.51
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	92.49
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	92.49
PTZ00036	440	glycogen synthase kinase; Provisional	92.46
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	92.44
PLN00034	353	mitogen-activated protein kinase kinase; Provision	92.43
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	92.43
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	92.41
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	92.41
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	92.39
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	92.26
PTZ00267	478	NIMA-related protein kinase; Provisional	92.23
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	92.23
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	92.23
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	92.2
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	92.2
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	92.14
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	92.13
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	92.11
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	92.1
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	92.1
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	92.09
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	92.08
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	92.04
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	92.04
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	92.03
KOG4250|consensus	732		92.02
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	92.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	91.98
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	91.98
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	91.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	91.94
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	91.94
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	91.9
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	91.9
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	91.85
KOG0608|consensus	1034		91.78
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	91.78
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	91.77
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	91.72
PHA03212	391	serine/threonine kinase US3; Provisional	91.72
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	91.71
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	91.71
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	91.69
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	91.68
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	91.66
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	91.64
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	91.63
KOG0592|consensus	604		91.55
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	91.52
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	91.51
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	91.5
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	91.49
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	91.48
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	91.47
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	91.45
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	91.45
PHA03209	357	serine/threonine kinase US3; Provisional	91.45
KOG3087|consensus	229		91.4
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	91.4
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	91.4
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	91.39
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	91.37
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	91.32
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	91.32
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	91.31
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	91.3
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	91.29
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	91.29
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	91.28
KOG0588|consensus	786		91.28
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	91.28
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	91.24
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	91.23
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	91.18
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	91.16
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	91.12
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	91.12
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	91.1
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	91.07
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	91.06
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	91.04
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	91.04
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	91.03
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	91.02
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	91.01
COG0661	517	AarF Predicted unusual protein kinase [General fun	91.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	90.99
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	90.96
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	90.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	90.9
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	90.89
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	90.89
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	90.85
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	90.84
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	90.83
TIGR02457	528	TreS_Cterm trehalose synthase-fused probable malto	90.83
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	90.83
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	90.81
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	90.79
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	90.76
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	90.73
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	90.72
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	90.71
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	90.7
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	90.68
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	90.67
PLN00009	294	cyclin-dependent kinase A; Provisional	90.66
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	90.62
KOG0581|consensus	364		90.61
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	90.61
PHA03210	501	serine/threonine kinase US3; Provisional	90.6
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	90.59
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	90.59
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	90.56
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	90.56
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	90.55
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	90.54
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	90.51
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	90.5
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	90.45
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	90.38
PHA03207	392	serine/threonine kinase US3; Provisional	90.35
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	90.35
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	90.34
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	90.29
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	90.28
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	90.28
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	90.25
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	90.25
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	90.14
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	90.14
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	90.13
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	90.11
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	90.06
PTZ00284	467	protein kinase; Provisional	89.95
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	89.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	89.9
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	89.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	89.87
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	89.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	89.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	89.79
KOG0616|consensus	355		89.77
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	89.77
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	89.73
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	89.73
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	89.72
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	89.69
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	89.67
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	89.63
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	89.62
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	89.61
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	89.6
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	89.58
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	89.57
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	89.55
KOG1163|consensus	341		89.53
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	89.52
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	89.52
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	89.5
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	89.46
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	89.44
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	89.43
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	89.43
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	89.41
PHA03211	461	serine/threonine kinase US3; Provisional	89.41
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	89.41
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	89.3
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	89.3
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	89.23
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	89.21
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	89.21
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	89.18
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	89.16
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	89.15
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	89.15
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	89.14
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	89.11
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	89.09
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	89.07
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	89.04
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	89.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	88.99
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	88.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	88.9
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	88.89
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	88.88
KOG0598|consensus	357		88.88
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	88.86
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	88.82
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	88.81
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	88.81
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	88.79
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	88.78
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	88.77
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	88.77
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	88.69
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	88.65
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	88.62
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	88.6
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	88.59
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	88.54
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	88.52
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	88.48
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	88.43
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	88.42
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	88.42
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	88.32
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	88.3
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	88.24
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	88.2
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	88.18
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	88.16
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	88.15
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	88.12
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	88.08
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	88.08
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	88.07
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	88.06
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	88.02
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	88.01
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	88.01
PTZ00283	496	serine/threonine protein kinase; Provisional	88.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	87.96
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	87.93
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	87.84
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	87.84
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	87.69
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	87.68
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	87.58
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	87.51
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	87.47
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	87.43
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	87.4
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	87.28
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	87.26
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	87.25
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	87.23
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	87.18
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	87.17
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	87.17
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	87.17
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	87.16
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	87.08
KOG0198|consensus	313		87.04
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	87.03
KOG0610|consensus	459		86.97
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	86.95
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	86.81
KOG1006|consensus	361		86.79
KOG1166|consensus	974		86.73
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	86.65
KOG0612|consensus	1317		86.58
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	86.58
KOG0600|consensus	560		86.56
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	86.55
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	86.55
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	86.53
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	86.47
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	86.47
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	86.24
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	86.12
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	86.11
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	85.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	85.84
PLN03224	507	probable serine/threonine protein kinase; Provisio	85.84
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	85.82
PLN00181	793	protein SPA1-RELATED; Provisional	85.75
KOG0659|consensus	318		85.72
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	85.63
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	85.42
KOG1164|consensus	322		85.31
KOG1167|consensus	418		85.28
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	85.15
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	85.11
KOG0605|consensus	550		85.08
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	84.88
KOG0578|consensus	550		84.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	84.86
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	84.68
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	84.36
KOG2345|consensus	302		84.36
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	84.35
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	84.14
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	84.06
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	83.91
KOG0660|consensus	359		83.85
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	83.68
PTZ00024	335	cyclin-dependent protein kinase; Provisional	83.48
PF01636	239	APH: Phosphotransferase enzyme family This family	83.39
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	83.28
KOG1187|consensus	361		83.02
KOG0596|consensus	677		82.59
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	82.25
KOG0593|consensus	396		81.89
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	81.81
KOG0615|consensus	475		81.72
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	81.72
KOG0595|consensus	429		81.69
KOG1235|consensus	538		81.53
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	81.46
KOG3021|consensus	313		81.1
KOG0665|consensus	369		80.83
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	80.52
PHA02988	283	hypothetical protein; Provisional	80.24

>KOG4720|consensus

Probab=100.00  E-value=2.6e-46  Score=349.13  Aligned_cols=171  Identities=48%  Similarity=0.824  Sum_probs=165.5

Q ss_pred             chhhhhcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhC
Q psy8745          12 SSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAG   91 (317)
Q Consensus        12 ~~~~~~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~   91 (317)
                      +++....+| ..+.|.+|+.||++.+...++|+|||||||.++|||+++..+.|.|||||||+||+.+|||||||||++|
T Consensus       217 ~kq~~~~~~-~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~afDIgNHFnE~aG  295 (391)
T KOG4720|consen  217 NKQNLFDEP-SPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAFDIGNHFNEYAG  295 (391)
T ss_pred             chhhcccCC-CHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhheehhhhHHhhcC
Confidence            677777888 8999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q psy8745          92 VSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQ  171 (317)
Q Consensus        92 ~~~~d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~  171 (317)
                      .+++||+.||+.++|.+||+.||+.|+|.++++.|++.|+.+|+.|++++|+||++||++|++.|+|+|||+.||..|++
T Consensus       296 v~evDYSlyp~rE~Q~qwl~~YLq~~kg~evs~~eVe~lfvqvn~FalAsHlfWavWAllQA~~StIdFdylgYa~lRyn  375 (391)
T KOG4720|consen  296 VEEVDYSLYPTREEQLQWLRDYLQAYKGKEVSDTEVETLFVQVNQFALASHLFWAVWALLQAQNSTIDFDYLGYAFLRYN  375 (391)
T ss_pred             CCccchhcCCCHHHHHHHHHHHHhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccchhhHHHHHH
Confidence            98999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhHhhhcCC
Q psy8745         172 GYVLKRDKYLGT  183 (317)
Q Consensus       172 ~y~~~k~el~~~  183 (317)
                      +|.+.|.+++++
T Consensus       376 eY~k~k~~~~sl  387 (391)
T KOG4720|consen  376 EYQKRKPEVLSL  387 (391)
T ss_pred             HhhccCcceeee
Confidence            999999998765

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=100.00  E-value=3.5e-38  Score=302.97  Aligned_cols=163  Identities=36%  Similarity=0.668  Sum_probs=148.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCC
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPG  102 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~  102 (317)
                      ++.+.+++..+++.+...+.++||||||++++|||++++++.++||||||||+|+|+||||+|||||++++ ++|+.||+
T Consensus       161 ~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f~E~~~~~-~~~~~~p~  239 (330)
T PLN02421        161 FEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHFNEYAGFD-CDYSLYPS  239 (330)
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHHHHHcccc-cCcccCcC
Confidence            66788899999988888889999999999999999975457899999999999999999999999998864 78999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcC
Q psy8745         103 PEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLG  182 (317)
Q Consensus       103 ~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~  182 (317)
                      .++|..|++.|++.......+++++++++.+|+.|.+++|++|++||++|+..|+++|||+.||..||++|++.|+++.+
T Consensus       240 ~~~~~~fl~~Y~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~W~lWa~iq~~~s~i~fdf~~ya~~R~~~y~~~k~~~~~  319 (330)
T PLN02421        240 KEEQYHFFRHYLRPDDPEEVSDAELEELFVETNFYALASHLYWAIWAIVQAKMSPIDFDYLGYFFLRYKEYKRQKEKLLS  319 (330)
T ss_pred             HHHHHHHHHHhCCcccCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999975433446778899999999999999999999999999999999999999999999999999999977


Q ss_pred             CCCC
Q psy8745         183 TSPP  186 (317)
Q Consensus       183 ~e~~  186 (317)
                      +..+
T Consensus       320 ~~~~  323 (330)
T PLN02421        320 LVRS  323 (330)
T ss_pred             cchh
Confidence            7544

>PTZ00296 choline kinase; Provisional

Probab=100.00  E-value=1.6e-36  Score=302.16  Aligned_cols=159  Identities=29%  Similarity=0.507  Sum_probs=139.0

Q ss_pred             CHHHHHHHHHHHHHHHh------cCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCC--
Q psy8745          22 GVSQLQSDWQYIETALS------KTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS--   93 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~------~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~--   93 (317)
                      +++.+.+++.++...+.      ..+.++||||||++++|||.+  +++|+||||||||+|+|+||||+|||||++..  
T Consensus       256 ~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~--~~~l~LIDfEYAg~ndpafDIAn~f~E~~~dy~~  333 (442)
T PTZ00296        256 DIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINT--NKCLRLIDFEYSGYNFLATDIANFFIETTIDYSV  333 (442)
T ss_pred             hHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCccceeec--CCCEEEEeecccccccHHHHHHHHHHHHhhhcCC
Confidence            56778888999988875      456789999999999999985  35699999999999999999999999999622  


Q ss_pred             ------CCCCCCCCCHHHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhc--CCCCCCH
Q psy8745          94 ------PIDHSRYPGPEFQLSWLRTYLEEYTGS---PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEH--SDIEFDF  162 (317)
Q Consensus        94 ------~~d~~~yp~~e~~~~fi~~YL~~y~~~---~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~--s~~~fDy  162 (317)
                            .++++.||+.++|..||+.||+.+.+.   ..++++++.|+.+|+.|.+++|++|++||++|+..  |.++|||
T Consensus       334 ~~~p~f~~d~~~yPs~e~q~~Fi~~Yl~~~~~~~~~~~~~~~v~~l~~ev~~f~l~shl~W~lWaiiqa~~~~s~idFDy  413 (442)
T PTZ00296        334 SHYPFFAIDKKKYISYENRKLFITAYLSNYLDKSLVVPNPKIIDQILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDF  413 (442)
T ss_pred             CCCCccccCcccCcCHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCcccCCCCCCH
Confidence                  247889999999999999999987422   23456899999999999999999999999999974  5699999


Q ss_pred             HHHHHHHHHHHHHhHhhhcC
Q psy8745         163 FQYASSTYQGYVLKRDKYLG  182 (317)
Q Consensus       163 ~~Ya~~R~~~y~~~k~el~~  182 (317)
                      +.||..||++|++.|+.+++
T Consensus       414 ~~Ya~~R~~~Y~~~k~~~~~  433 (442)
T PTZ00296        414 FLYAKERFKMYDEQKEYLIS  433 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999844

>PLN02236 choline kinase

Probab=100.00  E-value=2e-35  Score=285.54  Aligned_cols=160  Identities=38%  Similarity=0.742  Sum_probs=145.0

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCC------CCC
Q psy8745          22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV------SPI   95 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~------~~~   95 (317)
                      +.+.+.+++++|++.+.....+.|+||||++++|||+++.++.+.+||||||++|+|+||||+||||+++.      ..+
T Consensus       178 ~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~~Dia~~~~e~~~~y~~~~~~~~  257 (344)
T PLN02236        178 RLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAYDIANHFCEMAADYHSETPHIL  257 (344)
T ss_pred             CHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchHHHHHHHHHHHHHhhcCCCcccC
Confidence            35688889999998888778899999999999999998645679999999999999999999999998762      135


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q psy8745          96 DHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVL  175 (317)
Q Consensus        96 d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~  175 (317)
                      |++.||+.+++..|++.|++.. |..+++.+++.++.+|+.|.+++|++|++||++|+..|+++|||+.||+.|++.|++
T Consensus       258 ~~~~~~~~~~~~~fi~~Yl~~~-g~~~~~~~~~~l~~~v~~~~~~~~l~W~lWa~iq~~~s~~~fdy~~Ya~~R~~~y~~  336 (344)
T PLN02236        258 DYSKYPGEEERRRFIRTYLSSS-GEEPSDEEVEQLLDDVEKYTLASHLFWGLWGIISGHVNKIDFDYMEYARQRFEQYWL  336 (344)
T ss_pred             chhhCcCHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHHHHHhhHhHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence            7788999999999999999875 567788899999999999999999999999999999999999999999999999999


Q ss_pred             hHhhhcC
Q psy8745         176 KRDKYLG  182 (317)
Q Consensus       176 ~k~el~~  182 (317)
                      +|+++++
T Consensus       337 ~k~~~~~  343 (344)
T PLN02236        337 RKPELLG  343 (344)
T ss_pred             HHHHhcc
Confidence            9999865

>KOG2686|consensus

Probab=100.00  E-value=7.9e-35  Score=279.10  Aligned_cols=159  Identities=34%  Similarity=0.653  Sum_probs=142.0

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCC-C------
Q psy8745          22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS-P------   94 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~-~------   94 (317)
                      ....+..|+.++++..+..+.++||||||++.||||+.+..+.+++||||||+||+++||||||||||+.++ .      
T Consensus       190 ~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlanHf~E~~~DY~~~~~P~~  269 (366)
T KOG2686|consen  190 EIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLANHFCEWAADYHTPTPPGL  269 (366)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHHHHHHhhccccCCCCCee
Confidence            366788899999998866788999999999999999986677899999999999999999999999999843 1      


Q ss_pred             -CCCCCCCCHHHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcC-CCCCCHHHHHHHHH
Q psy8745          95 -IDHSRYPGPEFQLSWLRTYLEEYTGS--PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHS-DIEFDFFQYASSTY  170 (317)
Q Consensus        95 -~d~~~yp~~e~~~~fi~~YL~~y~~~--~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s-~~~fDy~~Ya~~R~  170 (317)
                       ++-+.||++++++.|+..|+.+....  ...+.+++.|+++++.|++++|+||+||+++|+..+ .++|||+.||+.|+
T Consensus       270 ~~~~~~~p~~e~~~~F~~sYl~~~~~~~~~~~~~ev~~L~~e~~~~~p~shlfW~LWsi~q~~~~~~i~fdy~~y~r~rf  349 (366)
T KOG2686|consen  270 KINPDLYPGEEQRQRFIESYLDSAAVKRKEPREKEVEKLLKEIRFFTPASHLFWGLWSILQALVLHKIEFDYMEYARDRF  349 (366)
T ss_pred             ecchhhCCCcHHHHHHHHHHHHHhhccccCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhccccccChHHHHHHHH
Confidence             12356999999999999999987522  556789999999999999999999999999999998 89999999999999


Q ss_pred             HHHHHhHhhh
Q psy8745         171 QGYVLKRDKY  180 (317)
Q Consensus       171 ~~y~~~k~el  180 (317)
                      ..|+..|+.+
T Consensus       350 ~~y~~~k~~L  359 (366)
T KOG2686|consen  350 AVYFHLKPRL  359 (366)
T ss_pred             HHHhccchhh
Confidence            9999999888

>PTZ00384 choline kinase; Provisional

Probab=100.00  E-value=1.8e-32  Score=268.64  Aligned_cols=158  Identities=27%  Similarity=0.491  Sum_probs=133.8

Q ss_pred             CHHHHHHHHHHHHHHHhc-------CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCC
Q psy8745          22 GVSQLQSDWQYIETALSK-------TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSP   94 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~-------~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~   94 (317)
                      +...+.++++.+++.+..       ...++||||||++++|||.+  +++++|||||||++|+|+||||||||||++++.
T Consensus       198 ~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~--~~~l~lID~EYA~~n~~~fDLAn~f~E~~~~y~  275 (383)
T PTZ00384        198 DYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDF--NQGIYFIDFDFAGFNYVGWEIANFFVKLYIVYD  275 (383)
T ss_pred             CHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEec--CCCEEEEEeccccCCchHhHHHHHHHHHhcccC
Confidence            566788888887766642       23469999999999999985  467999999999999999999999999998532


Q ss_pred             --------CCCCCCCCHHHHHHHHHHHHHHhcCCC--CCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcC----CCCC
Q psy8745          95 --------IDHSRYPGPEFQLSWLRTYLEEYTGSP--PSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHS----DIEF  160 (317)
Q Consensus        95 --------~d~~~yp~~e~~~~fi~~YL~~y~~~~--~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s----~~~f  160 (317)
                              .+++.||+.++|..|++.||+.+.+..  +++++++.|+.+|+.|++++|+||++||++|+..+    ..++
T Consensus       276 ~~~~~~~~~~~~~~ps~e~~~~fi~~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~l~sh~~W~lW~iIq~~~~~~~~~~~~  355 (383)
T PTZ00384        276 PPTPPYFNSDDSLALSEEMKTIFVSVYLSQLLGKNVLPSDDLVKEFLQSLEIHTLGVNLFWTYWGIVMNDKPKNELSKPV  355 (383)
T ss_pred             CCCCCccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCc
Confidence                    245678999999999999999876433  46789999999999999999999999999999842    2378


Q ss_pred             CHHHHHHHHHHHHHHhHhhhc
Q psy8745         161 DFFQYASSTYQGYVLKRDKYL  181 (317)
Q Consensus       161 Dy~~Ya~~R~~~y~~~k~el~  181 (317)
                      ||+.||..|+++|++..+++.
T Consensus       356 ~f~~y~~~r~~~~~~~~~~~~  376 (383)
T PTZ00384        356 KFEAYAKFQYNLFKNNLRKLT  376 (383)
T ss_pred             hHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999998877763

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=99.94  E-value=2.1e-26  Score=216.59  Aligned_cols=112  Identities=42%  Similarity=0.791  Sum_probs=98.5

Q ss_pred             CCCeeeeecCCCCCCeeeeCC---CCeEEEEeeccccCCchhhhHHHHHHHhhCCC--------CCCCCCCCCHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDET---EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS--------PIDHSRYPGPEFQLSW  109 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~--------~~d~~~yp~~e~~~~f  109 (317)
                      ..+.|+||||++++|||++++   ++.+.|||||||++|+|+||||++|+|++...        .++++.||+.++|..|
T Consensus       176 ~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~~~e~~~~~~~~~~~~~~~~~~~~p~~~~~~~f  255 (302)
T cd05156         176 GSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANHFCEWMYDYHDPEPPFFKIHEDKYPTEEQRLNF  255 (302)
T ss_pred             CCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHHHHHHHhhcCCCCCCccccChhhCcCHHHHHHH
Confidence            478999999999999999753   36799999999999999999999999998521        2467789999999999


Q ss_pred             HHHHHHHhcC----CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHH
Q psy8745         110 LRTYLEEYTG----SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQ  152 (317)
Q Consensus       110 i~~YL~~y~~----~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq  152 (317)
                      ++.|++.+.+    .+.+..+++.++.+|..|.+++|++|++||++|
T Consensus       256 ~~~Yl~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~W~lW~~~q  302 (302)
T cd05156         256 ISAYLSESLKGKNSVEEREKEVKDLLEEVEIFTPASHLFWALWGIIQ  302 (302)
T ss_pred             HhccCchhcccccccCcHHHHHHHHHHHHHHHHhhhhHHHHHHHhcC
Confidence            9999998753    345678899999999999999999999999987

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG4720|consensus

Probab=99.88  E-value=1.5e-23  Score=196.75  Aligned_cols=95  Identities=34%  Similarity=0.721  Sum_probs=86.2

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC--CCCCcchHHHHHHHhhcc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN--MKTPKLWSTGKHMLSLIP  263 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~--~~~p~lw~~i~kwl~~~~  263 (317)
                      .++++|+++||||+|||+|+||+||+||+|+||.|++|++|+|.++|||+||++|+++++  .++|.||.+|.+|+++++
T Consensus       130 ~afk~L~a~G~ap~Ly~tF~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~g~~pkp~lw~km~~f~~lv~  209 (391)
T KOG4720|consen  130 IAFKLLAAYGFAPKLYGTFNNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVATGGNPKPPLWEKMRKFLQLVP  209 (391)
T ss_pred             HHHHHHHHcCcChhhhheecCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccCCCCCCCcHHHHHHHHHHhcC
Confidence            678999999999999999999999999999999999999999999999999999999987  478899999999999999


Q ss_pred             ccCCCchhhhhhhccccc
Q psy8745         264 RTYSNPDKQERYCSRAQS  281 (317)
Q Consensus       264 ~~f~d~~k~~~~~~~~~s  281 (317)
                      +.|.|+ ++++....++|
T Consensus       210 ~~f~de-~~kq~~~~~~~  226 (391)
T KOG4720|consen  210 TSFEDE-INKQNLFDEPS  226 (391)
T ss_pred             chhhcc-cchhhcccCCC
Confidence            999887 44444444444

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=99.78  E-value=2.7e-18  Score=161.36  Aligned_cols=133  Identities=26%  Similarity=0.407  Sum_probs=105.5

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCC-eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCC
Q psy8745          22 GVSQLQSDWQYIETALSKTKSP-VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRY  100 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~-~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~y  100 (317)
                      +...+.+.+..|+..+.....+ .|+||||++++|+|.++ .++++||||||||+|+|+||||+++.|+..         
T Consensus       130 ~~~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~---------  199 (269)
T COG0510         130 DNHLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGLNDPAFDLAALLSEYIF---------  199 (269)
T ss_pred             hhHHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcC-CCcEEEEecccCCCccHHHHHHHHHHHhcc---------
Confidence            5667788888888888888878 99999999999999975 589999999999999999999999999763         


Q ss_pred             CCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhh
Q psy8745         101 PGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKY  180 (317)
Q Consensus       101 p~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el  180 (317)
                       +..+.......|++.|.   . +.        |..+.+...+.|.+|+.+|....   .++..|+..|+.+..+..+.+
T Consensus       200 -~~~~~~~~~~~~~~~~~---~-~~--------~~~~~i~~~~~W~l~~~~~~~~~---~~~~~~~~k~~~~~~~~l~~~  263 (269)
T COG0510         200 -NHNELEDLYSAYLEKYG---F-EA--------VLIYKILQKFLWYLWTKLQEQIL---EDFGWYDKKRLNRAIDLLENL  263 (269)
T ss_pred             -chhHHHHHHHHHHHhCC---c-hh--------hHHHHHHHHhHHHHHHHHHHHhh---hhhhhhhHHHHHHHHHHHHHH
Confidence             23334556667777652   1 11        44567778899999999999986   588889988888765555444

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=99.78  E-value=1.2e-19  Score=162.91  Aligned_cols=84  Identities=45%  Similarity=0.722  Sum_probs=65.5

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCC-------CC
Q psy8745          22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV-------SP   94 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~-------~~   94 (317)
                      .++.|.+++.++++.+...+.+.||||||++++|||++..+++++||||||||+|+|+||||++|+|+++.       ..
T Consensus       121 ~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f~e~~~~~~~~~~~~~  200 (211)
T PF01633_consen  121 DLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFFCEWNFDYEQEEFFFK  200 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHHHHTTEETTHSSTSTE
T ss_pred             CHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHHHHHcCchhhhhhhhh
Confidence            57789999999999998888999999999999999994447899999999999999999999999999872       24


Q ss_pred             CCCCCCCCHHH
Q psy8745          95 IDHSRYPGPEF  105 (317)
Q Consensus        95 ~d~~~yp~~e~  105 (317)
                      ++++.||+.++
T Consensus       201 ~~~~~yp~~~~  211 (211)
T PF01633_consen  201 CDYSKYPTEEQ  211 (211)
T ss_dssp             E-GGGS--HHH
T ss_pred             hhHhhCCCccC
Confidence            67888998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02721 ycfN_thiK thiamine kinase

Probab=99.75  E-value=1.1e-17  Score=154.26  Aligned_cols=111  Identities=19%  Similarity=0.301  Sum_probs=91.3

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS  120 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~  120 (317)
                      +.+.++||||++++|||+++  +++.|||||||++|+|+||||++++++            +.+++..|++.|.+...  
T Consensus       143 ~~~~~l~H~Dl~~~Nil~~~--~~~~lIDwE~a~~gdp~~DLa~~~~~~------------~~~~~~~~l~~Y~~~~~--  206 (256)
T TIGR02721       143 PLPLAPLHMDVHAYNLVVTP--QGLKLIDWEYASDGDIALELAAIIRAN------------DEEQQQDFVQRYCQRRR--  206 (256)
T ss_pred             CCCCeeecCCCCcCcEEEeC--CCCEEEeccccCcCCHHHHHHHHHHhC------------CHHHHHHHHHHHHHhhC--
Confidence            45789999999999999975  348999999999999999999999863            36888999999997631  


Q ss_pred             CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q psy8745         121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQ  171 (317)
Q Consensus       121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~  171 (317)
                       ..  ..+.+..+++.|.++.+++|++|+.++...++ +-.|.+-|+....
T Consensus       207 -~~--~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~a~~~~~  253 (256)
T TIGR02721       207 -IY--SISVLWRQVKAWQPWVDYMAALWFELRWQQTG-DPQFLELAQELRH  253 (256)
T ss_pred             -Cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHH
Confidence             11  13567889999999999999999999998875 4567776666554

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=99.74  E-value=5e-18  Score=153.65  Aligned_cols=88  Identities=53%  Similarity=0.933  Sum_probs=77.3

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCC
Q psy8745          22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYP  101 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp  101 (317)
                      ..+.+.+++.+|.+.+.....+.|+||||++++|||+++.++.+.|||||||++|+|+||||++++||+++ ++|+..||
T Consensus       148 ~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~~e~~~~-~~~~~~~~  226 (235)
T cd05157         148 SFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHFNEWAGF-DCDYYLYP  226 (235)
T ss_pred             cHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHHHHHcCc-cCChhhCc
Confidence            56788888889988887777889999999999999998533679999999999999999999999999865 47788899


Q ss_pred             CHHHHHHHH
Q psy8745         102 GPEFQLSWL  110 (317)
Q Consensus       102 ~~e~~~~fi  110 (317)
                      +.++|+.|+
T Consensus       227 ~~~~~~~~~  235 (235)
T cd05157         227 PKEEQQAFI  235 (235)
T ss_pred             CHHHHHhhC
Confidence            999998885

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG2686|consensus

Probab=99.74  E-value=5.1e-19  Score=170.36  Aligned_cols=84  Identities=30%  Similarity=0.465  Sum_probs=78.4

Q ss_pred             CCCCcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-CCC-cchHHHHHHHh
Q psy8745         183 TSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-KTP-KLWSTGKHMLS  260 (317)
Q Consensus       183 ~e~~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p-~lw~~i~kwl~  260 (317)
                      +|.++|.+|+++|+||+|||+|+|||+|||||+|||+.+++++|++++.||++|+++|.+++|+ |+| .+|++|++|+.
T Consensus        91 ~Esv~fa~lSer~lGPkL~G~F~~GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~  170 (366)
T KOG2686|consen   91 TESVMFAILSERGLGPKLYGFFSGGRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLK  170 (366)
T ss_pred             hHHHHHHHHhhcCCCcceeeecCCccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHh
Confidence            4458999999999999999999999999999999999999999999999999999999999984 888 79999999998


Q ss_pred             hccccC
Q psy8745         261 LIPRTY  266 (317)
Q Consensus       261 ~~~~~f  266 (317)
                      .+....
T Consensus       171 ~~~~~~  176 (366)
T KOG2686|consen  171 GAKKIK  176 (366)
T ss_pred             hhhhcC
Confidence            877653

>PRK10271 thiK thiamine kinase; Provisional

Probab=99.59  E-value=6e-15  Score=131.85  Aligned_cols=117  Identities=21%  Similarity=0.273  Sum_probs=92.0

Q ss_pred             HHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHH
Q psy8745          30 WQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSW  109 (317)
Q Consensus        30 ~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~f  109 (317)
                      +..++......+.+.|+||||++++||+..+  +++.+||||||+.|+|++|||.++++             +.+++..|
T Consensus        63 ~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~--~~~~lIDwe~a~~gDp~~DLa~~~~~-------------~~~~~~~~  127 (188)
T PRK10271         63 LKRLRKAGEPRPLRLAPLHMDVHAGNLVHSA--SGLRLIDWEYAGDGDIALELAAVWVE-------------NTEQHRQL  127 (188)
T ss_pred             HHHHHhcccCCCCCeeeecCCCCCccEEEEC--CCEEEEeCCcccCCCHHHHHHHHHcC-------------CHHHHHHH
Confidence            3444444445677899999999999999975  55999999999999999999998763             35778889


Q ss_pred             HHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHH
Q psy8745         110 LRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASS  168 (317)
Q Consensus       110 i~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~  168 (317)
                      ++.|...   ...   +...+..+|+.|.+...++-.+|..++.+.++ |-.|+.-|..
T Consensus       128 l~~Y~~~---~~~---d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~-d~~fl~~a~~  179 (188)
T PRK10271        128 VNDYATR---AKI---DAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTG-DQQFIRLADD  179 (188)
T ss_pred             HHHHhCc---cCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHH
Confidence            9988843   112   23567778999999999999999999999885 4567655543

>PTZ00296 choline kinase; Provisional

Probab=99.42  E-value=9.9e-14  Score=138.85  Aligned_cols=80  Identities=16%  Similarity=0.344  Sum_probs=74.1

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC----C---CCCCcchHHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS----N---MKTPKLWSTGKHM  258 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~----~---~~~p~lw~~i~kw  258 (317)
                      .++++|+++|+||++||+|+||+|++||+|+||++.++++|.+++.||+.|++||++..    +   +++|.+|.+|++|
T Consensus       161 ~v~~~ls~~gi~P~l~~~f~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~~i~~~  240 (442)
T PTZ00296        161 EVYKTMSKYRIAPQLLNTFSGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKW  240 (442)
T ss_pred             HHHHHHHHCCCCCceEEEeCCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHHHHHHH
Confidence            67889999999999999999999999999999999999999999999999999999852    2   4789999999999


Q ss_pred             Hhhcccc
Q psy8745         259 LSLIPRT  265 (317)
Q Consensus       259 l~~~~~~  265 (317)
                      +..++..
T Consensus       241 ~~~~~~~  247 (442)
T PTZ00296        241 KNQLSKY  247 (442)
T ss_pred             HHHHHhh
Confidence            9998764

>PTZ00384 choline kinase; Provisional

Probab=99.42  E-value=8.9e-14  Score=136.85  Aligned_cols=78  Identities=18%  Similarity=0.311  Sum_probs=71.5

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC---C---CCCCcchHHHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS---N---MKTPKLWSTGKHML  259 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~---~---~~~p~lw~~i~kwl  259 (317)
                      +++++|+++|+||++||.|+||+|++||+|++|+.+++++|.+++.||++||+||.+..   |   ++.|.+|.+|.+|+
T Consensus       104 ~i~~~Ls~~glgP~l~~~f~~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~~~p~~~~~i~~w~  183 (383)
T PTZ00384        104 NIAKLLGDNNFGPKIIGRFGDFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWDRTPMFLTKISTWS  183 (383)
T ss_pred             HHHHHHHhCCCCCeEEEecCCEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhcccccCCCccccCcchHHHHHHHHH
Confidence            67889999999999999999999999999999999999999999999999999999753   2   36788999999999


Q ss_pred             hhcc
Q psy8745         260 SLIP  263 (317)
Q Consensus       260 ~~~~  263 (317)
                      ..+.
T Consensus       184 ~~~~  187 (383)
T PTZ00384        184 QHVE  187 (383)
T ss_pred             HHHH
Confidence            7654

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=99.39  E-value=4e-12  Score=118.99  Aligned_cols=101  Identities=20%  Similarity=0.232  Sum_probs=73.1

Q ss_pred             CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Q psy8745          40 TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTG  119 (317)
Q Consensus        40 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~  119 (317)
                      ...+.++||||++++|+|+++ ++.+.|||||+|+++++.+|||..+..|+.....+    .+.+....|++.|.+.   
T Consensus       171 ~~~~~~l~HgD~~~~Nil~~~-~~~~~iIDfe~a~~g~~~~Dla~~~~~~~~~~~~~----~~~~~~~~~l~gY~~~---  242 (296)
T cd05153         171 SDLPRGVIHADLFRDNVLFDG-DELSGVIDFYFACTDAFLYDLAITLNDWCFDEDGA----LDPERAQALLAGYQAV---  242 (296)
T ss_pred             hcCCCcCCccCcCcccEEEeC-CceEEEeehhhhcCchHHHHHHHHHHHHHhCccCC----CCHHHHHHHHHHHHhc---
Confidence            356789999999999999985 34457999999999999999999998776522111    2456677888888764   


Q ss_pred             CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHH
Q psy8745         120 SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQ  152 (317)
Q Consensus       120 ~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq  152 (317)
                      ++++++|++.|...    .++..+.+.+|.+.-
T Consensus       243 ~~ls~~e~~~l~~~----~~~~a~~~~~~~~~~  271 (296)
T cd05153         243 RPLTEAERAALPIM----LRGAALRFWLSRLYD  271 (296)
T ss_pred             CCCCHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence            56889998887643    333334445555543

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=99.38  E-value=2.5e-13  Score=121.88  Aligned_cols=73  Identities=33%  Similarity=0.656  Sum_probs=63.1

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC--CCCCCcchHHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS--NMKTPKLWSTGKHM  258 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~--~~~~p~lw~~i~kw  258 (317)
                      .++++|++.|+||++|+.|+||+|++||+|+||+++++++|.+...||+.||+||.+..  ..+.+.+|+.|++|
T Consensus        25 ~~~~~l~~~g~~p~~~~~~~~g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~lH~~~~~~~~~~~~~~~~i~~~   99 (211)
T PF01633_consen   25 EALKLLSEAGLGPKIIYFFENGRVEEFIEGRTLSPEDFRNPEILKRIAKLLAKLHSIPISPNSKKPDLWDRIDKY   99 (211)
T ss_dssp             HHHHHHHHTTSSS-EEEEETTEEEEE--SSEE--CGGGGSHHHHHHHHHHHHHHHTHHHTTSSSS-HHHHHHHHH
T ss_pred             HHHHHHHHcCCCCeEEEEcCCCcEEEEecccccChhhccChHHHHHHHHHHHHHhhcccccccCcchHHHHhhhh
Confidence            55688999999999999999999999999999999999999999999999999999987  35778899999999

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=99.37  E-value=5.9e-13  Score=128.23  Aligned_cols=89  Identities=27%  Similarity=0.589  Sum_probs=80.4

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-CCCcchHHHHHHHhhccc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-KTPKLWSTGKHMLSLIPR  264 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p~lw~~i~kwl~~~~~  264 (317)
                      .+++.|++.|+||++++.|+||+|++||+|++|+++++++|.+...||+.|++||.+.++. +.|.+|..|++|++++.+
T Consensus        65 ~il~~l~~~gl~P~~l~~~~~G~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~  144 (330)
T PLN02421         65 QAIKYLSAAGFGAKLLGVFGNGMIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKAST  144 (330)
T ss_pred             HHHHHHHhcCCCCceeEEeCCcEeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhh
Confidence            4567899999999999999999999999999999999999999999999999999998774 678999999999999987


Q ss_pred             -cCCCchhhhh
Q psy8745         265 -TYSNPDKQER  274 (317)
Q Consensus       265 -~f~d~~k~~~  274 (317)
                       .|.++.+++.
T Consensus       145 ~~~~~~~~~~~  155 (330)
T PLN02421        145 VKFEDPEKQKK  155 (330)
T ss_pred             cccCcHHHhhh
Confidence             4777766554

>PLN02236 choline kinase

Probab=99.34  E-value=8.5e-13  Score=127.93  Aligned_cols=81  Identities=25%  Similarity=0.464  Sum_probs=74.6

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-CCCcchHHHHHHHhhccc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-KTPKLWSTGKHMLSLIPR  264 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p~lw~~i~kwl~~~~~  264 (317)
                      .+++.|++.|+||++||.|+||+|++|++|+||+++++++|.+...||+.|++||++.+++ +.|.+|.+|++|+..+..
T Consensus        88 ~~~~~l~~~gl~P~~~~~~~~g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~  167 (344)
T PLN02236         88 RTFECMSRHGQGPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKN  167 (344)
T ss_pred             HHHHHHHHcCCCCceEEEECCceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHh
Confidence            5667899999999999999999999999999999999999999999999999999998765 568999999999988765


Q ss_pred             cC
Q psy8745         265 TY  266 (317)
Q Consensus       265 ~f  266 (317)
                      ..
T Consensus       168 l~  169 (344)
T PLN02236        168 LC  169 (344)
T ss_pred             hc
Confidence            54

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=99.26  E-value=1.3e-10  Score=109.20  Aligned_cols=100  Identities=21%  Similarity=0.274  Sum_probs=77.1

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS  120 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~  120 (317)
                      ..+.++||||++++||++++  +.+.+||||.++++++.+|||.++..++.. ..++    +.+....|++.|.+.   .
T Consensus       184 ~~~~~liHgD~~~~Nil~~~--~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~-~~~~----d~~~~~~~l~gY~~~---~  253 (313)
T TIGR02906       184 KKIRGFCHQDYAYHNILLKD--NEVYVIDFDYCTIDLPVRDLRKLIIKLMKK-NGVW----DLEKAKEIIEAYSSI---N  253 (313)
T ss_pred             cCcCceEcCCCCcccEEEeC--CcEEEEECcccccCCcHHHHHHHHHHHHHh-ccCC----CHHHHHHHHHHhhcc---C
Confidence            45789999999999999975  679999999999999999999998876511 1112    234556777777764   5


Q ss_pred             CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745         121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE  154 (317)
Q Consensus       121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~  154 (317)
                      +++++|++.|+    .+.++++.||.+|--+...
T Consensus       254 ~L~~~e~~~l~----~~l~~p~~~~~~~~~y~~~  283 (313)
T TIGR02906       254 PLSKEEKEVLY----IDLAFPHKFWKIGKQYYYK  283 (313)
T ss_pred             CCCHHHHHHHH----HHHhChHHHHHHHHHHHhc
Confidence            78899988776    5688888888877655443

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=99.26  E-value=3.7e-11  Score=114.13  Aligned_cols=101  Identities=21%  Similarity=0.306  Sum_probs=82.4

Q ss_pred             CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Q psy8745          40 TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTG  119 (317)
Q Consensus        40 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~  119 (317)
                      ...+.++||+|+.++|+|+++ ++.+.+||||+|++++|.+|||+++...+..  .+    ++.+....|++.|-+.   
T Consensus       192 ~~~~~~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~~d~~~~DLa~~~~~~~~~--~~----~~~~~~~~~l~~Y~~~---  261 (309)
T TIGR02904       192 ESWRTVLVHGKLSLSHFLYDE-TRGGYFINFEKASFASPLTDLAAFFRRSFGT--YP----QPIDEMFEWFYTYEKT---  261 (309)
T ss_pred             hhcceeeeCCCCcHHhEEEcC-CCCEEEEEhhhcccCCcHHHHHHHHHHHHhh--CC----CChHHHHHHHHHHHhc---
Confidence            457889999999999999976 4679999999999999999999988875431  12    3346667788888876   


Q ss_pred             CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745         120 SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE  154 (317)
Q Consensus       120 ~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~  154 (317)
                      ++++++|.+.|+    .+.++++-||-+|--+...
T Consensus       262 ~pL~~~E~~~l~----~~L~fP~~f~~~~~~yy~~  292 (309)
T TIGR02904       262 LPLTDEEIHLLT----SYLAYPGPFIRVIQNYTKQ  292 (309)
T ss_pred             CCCCHHHHHHHH----HHHhCCHHHHHHHHHHHhc
Confidence            678999988876    4688999999999877664

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.23  E-value=5.4e-11  Score=101.46  Aligned_cols=62  Identities=40%  Similarity=0.704  Sum_probs=54.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE  116 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~  116 (317)
                      +.++||+|++++|||++  ++++.+||||+|++++|++|||.++.++.          .+.+++..|++.|-..
T Consensus       106 ~~~~~HgD~~~~Nil~~--~~~~~liDf~~a~~~~~~~Dla~~~~~~~----------~~~~~~~~~~~~y~~~  167 (170)
T cd05151         106 DLVPCHNDLLPGNFLLD--DGRLWLIDWEYAGMNDPLFDLANFFSEAK----------LSEDQEEELLEAYFGR  167 (170)
T ss_pred             CceeecCCCCcCcEEEE--CCeEEEEecccccCCChHHHHHHHHHhcC----------CCHHHHHHHHHHHhCC
Confidence            78999999999999997  46799999999999999999999988753          2467788899888764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK05231 homoserine kinase; Provisional

Probab=99.22  E-value=1.6e-10  Score=109.66  Aligned_cols=101  Identities=19%  Similarity=0.289  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHhc---CCCCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCC
Q psy8745          26 LQSDWQYIETALSK---TKSPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYP  101 (317)
Q Consensus        26 L~~e~~~L~~~l~~---~~~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp  101 (317)
                      +.++++.+.+.+..   ...|.++||||++++|||+++  +++ .+||||+|+++++.||||..++.|+......+    
T Consensus       166 l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~--~~~~~iIDf~~~~~~~~~~DlA~~~~~~~~~~~~~~----  239 (319)
T PRK05231        166 LEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEG--DRLSGFIDFYFACNDKLLYDVAITLNDWCFEADGSL----  239 (319)
T ss_pred             HHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEEC--CceEEEEecccccCCchHHHHHHHHHHHHccCCCCc----
Confidence            34444444444442   236789999999999999974  455 69999999999999999999987775321111    


Q ss_pred             CHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhh
Q psy8745         102 GPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQ  135 (317)
Q Consensus       102 ~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~  135 (317)
                      +.+....|++.|-+.   ++++++|++.|..-++
T Consensus       240 ~~~~~~~~l~gY~~~---~~Ls~~E~~~l~~~l~  270 (319)
T PRK05231        240 DATKARALLAAYQSV---RPLTAAERAALPVMLR  270 (319)
T ss_pred             CHHHHHHHHHHHhhc---CCCCHHHHHHHHHHHH
Confidence            234556666666553   5789999888775433

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=99.18  E-value=5.7e-11  Score=108.79  Aligned_cols=71  Identities=18%  Similarity=0.177  Sum_probs=55.0

Q ss_pred             HHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHH
Q psy8745          34 ETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTY  113 (317)
Q Consensus        34 ~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~Y  113 (317)
                      .+.++....+.++||||++++|||+++ ++ +.+||||+|++|+|.+|||.++.-+..          ..+++..|+..|
T Consensus       143 ~~~l~~~~~~~~~~HgD~~~~Nii~~~-~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~----------~~~~~~~~~~~y  210 (226)
T TIGR02172       143 RAFIKEVPDTSTCLHGDFQIGNLITSG-KG-TYWIDLGDFGYGNPLFDLGLLFMFCHY----------LDDDKLQAIFHM  210 (226)
T ss_pred             HHHHHhCCCCCceEecCCCCCcEEEcC-CC-cEEEechhcCcCCHHHHHHHHHHhccC----------ChhHHHHHHHhc
Confidence            333434455667899999999999975 34 999999999999999999997664221          246788899888


Q ss_pred             HHH
Q psy8745         114 LEE  116 (317)
Q Consensus       114 L~~  116 (317)
                      +.+
T Consensus       211 ~~~  213 (226)
T TIGR02172       211 NAE  213 (226)
T ss_pred             CHH
Confidence            864

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=99.14  E-value=3.8e-10  Score=106.95  Aligned_cols=86  Identities=17%  Similarity=0.297  Sum_probs=65.1

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS  120 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~  120 (317)
                      ..+.++||||++++|+++++ ++.+.+||||+|+++++.+|||..+..|+......    .+.+....|++.|.+.   .
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~~~~~~~~DLA~~~~~~~~~~~~~----~~~~~~~~~l~gY~~~---~  255 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDG-DSVKGVIDFYFACTDARAYDLAITVNAWCFDADDH----FDADHAKALIKGYHQS---R  255 (307)
T ss_pred             cCCCccCCCCCCcCcEEEEC-CceEEEeecccccCcchHHHHHHHHHHHHcCCCCC----CCHHHHHHHHHHHHhc---C
Confidence            46789999999999999986 34457999999999999999999877665421111    1345667788888665   5


Q ss_pred             CCCHHHHHHHHHhh
Q psy8745         121 PPSPHQLATLHWQV  134 (317)
Q Consensus       121 ~~s~~ev~~l~~~v  134 (317)
                      +++++|++.|..-+
T Consensus       256 ~Ls~~e~~~l~~~~  269 (307)
T TIGR00938       256 PLTEEEKAAFPVLL  269 (307)
T ss_pred             CCCHHHHHHHHHHH
Confidence            78888888776443

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.07  E-value=2.9e-10  Score=100.42  Aligned_cols=61  Identities=21%  Similarity=0.329  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCC-CCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          28 SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET-EDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        28 ~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      +.+.++.+.+.. ..+.++||+|++++|||++++ ++.+.|||||++++++|++|||.++..|
T Consensus       159 ~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~~~~~  220 (223)
T cd05154         159 RLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWLLMYW  220 (223)
T ss_pred             HHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHHHHhc
Confidence            334444443332 257899999999999999763 3457899999999999999999998765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=99.05  E-value=6.2e-10  Score=98.35  Aligned_cols=75  Identities=36%  Similarity=0.592  Sum_probs=50.9

Q ss_pred             HHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHH
Q psy8745          30 WQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSW  109 (317)
Q Consensus        30 ~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~f  109 (317)
                      ++++.+.+.. ..+.++||+|++++|||+++++++|.|||||.+++++|.+|++.++..+..            +....+
T Consensus       153 ~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~~------------~~~~~~  219 (239)
T PF01636_consen  153 LQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFGE------------DQDPEF  219 (239)
T ss_dssp             HHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHTT------------HCHHHH
T ss_pred             HHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHHHHhcc------------cCCHHH
Confidence            4444444443 678999999999999999844577789999999999999999999854321            223445


Q ss_pred             HHHHHHHh
Q psy8745         110 LRTYLEEY  117 (317)
Q Consensus       110 i~~YL~~y  117 (317)
                      .+.|+++|
T Consensus       220 ~~~~~~~~  227 (239)
T PF01636_consen  220 RRAYLEAY  227 (239)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            66666666

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=99.02  E-value=1e-09  Score=100.14  Aligned_cols=65  Identities=29%  Similarity=0.383  Sum_probs=48.9

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTY  113 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~Y  113 (317)
                      ..+.|+||+|++++|||+++ ++.+.|||||+|++++|.+|||..+.....       ...+.+.+..|++.|
T Consensus       160 ~~~~~l~HgD~~~~Nil~~~-~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~-------~~~~~~~~~~f~~~Y  224 (244)
T cd05150         160 EEDLVVTHGDACLPNIIVDP-GKFSGFIDLGRLGVADRYQDLALAVRSLRE-------NLGGEEYAARFLDRY  224 (244)
T ss_pred             cCceEEECCCCCCccEEEeC-CcEEEEEEccccccccHHHHHHHHHHHhhh-------hcCChHHHHHHHHHc
Confidence            45789999999999999986 344669999999999999999998754211       111345556666665

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=98.99  E-value=2.2e-09  Score=95.93  Aligned_cols=65  Identities=22%  Similarity=0.291  Sum_probs=50.3

Q ss_pred             CCeeeeecCCCCCCeeeeCCC-C---eEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8745          42 SPVVFCHNDLLLGNIIYDETE-D---KVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY  117 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~-~---~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y  117 (317)
                      ...|+||||++++|+|+..++ +   .+.+|||+++++++|++||+.++....           +.+.+....+.+++.|
T Consensus       118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~-----------~~~~r~~~~~~ll~~Y  186 (196)
T smart00587      118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSL-----------SVEIRREHFDELLKFY  186 (196)
T ss_pred             CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCC-----------CHHHHHHHHHHHHHHH
Confidence            468999999999999996432 2   699999999999999999999987532           2445555555556555

subfamily of choline kinases

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.92  E-value=1.6e-09  Score=97.96  Aligned_cols=82  Identities=38%  Similarity=0.835  Sum_probs=72.6

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-------CCCcchHHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-------KTPKLWSTGKHM  258 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-------~~p~lw~~i~kw  258 (317)
                      ..+..|++.|++|++++.+.+|++++||+|++++..++.++.+...+|+.||+||.+..+.       +.|.+|+.+.+|
T Consensus        47 ~~~~~l~~~gl~P~v~~~~~~~~l~e~i~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~  126 (235)
T cd05157          47 RIHKLLSKHGLAPKLYATFQNGLIYEFIPGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKW  126 (235)
T ss_pred             HHHHHHHhCCCCCeEEEEeCCcEEEEeeCCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHH
Confidence            4567888999999999999999999999999999999999999999999999999998652       456799999999


Q ss_pred             HhhccccCC
Q psy8745         259 LSLIPRTYS  267 (317)
Q Consensus       259 l~~~~~~f~  267 (317)
                      +..++....
T Consensus       127 ~~~~~~~~~  135 (235)
T cd05157         127 INLVPTEFK  135 (235)
T ss_pred             HHHhHHhhc
Confidence            988776543

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=98.91  E-value=3.3e-08  Score=95.77  Aligned_cols=105  Identities=22%  Similarity=0.354  Sum_probs=75.4

Q ss_pred             eeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCHH
Q psy8745          46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPH  125 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~  125 (317)
                      +||||++++|+++++...-+.+|||+.|++++..||||..++.|..    |..  -.......|++.|-+.   ++++++
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~~~~i~DlAi~l~~~~~----d~~--~~~~~~~a~l~GY~~v---~pl~~~  269 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGYGWFIYDLAIALNAWNG----DEA--DPRAAIAAFLEGYEEV---RPLTAA  269 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccccchHHHHHHHHHHHhhc----CCC--CcHHHHHHHHHHHHhc---CCCCHH
Confidence            9999999999999863223679999999999999999999987621    111  1245566777777765   578999


Q ss_pred             HHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHH
Q psy8745         126 QLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFF  163 (317)
Q Consensus       126 ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~  163 (317)
                      |++.+..    +..+..+.-..|..+.....+..+++.
T Consensus       270 El~~Lp~----l~r~~a~~~~~~~~~~~~~~p~~~~~~  303 (331)
T COG2334         270 ELELLPD----LRRLRALRLWAWRLIRWLLPPAGRLWL  303 (331)
T ss_pred             HHHHHHH----HHHHHHHHHHHHHhhhhhcCCCCcchh
Confidence            8887753    344455666778777777664444443

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.85  E-value=1e-08  Score=101.70  Aligned_cols=61  Identities=23%  Similarity=0.329  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA   90 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~   90 (317)
                      |..++..|...+.+  .+.++||||++++|||+.+  +.+.+||||+|.+|+|+||||+++.++.
T Consensus       207 L~~~~~~L~~~~~~--~~~~l~HgDl~~gni~~~~--~~~~viD~E~a~~G~~~~Dlg~~lanl~  267 (401)
T PRK09550        207 LKLEVAKLKHKFLT--KAEALLHGDLHTGSIFVTE--EETKVIDPEFAFYGPIGFDIGTFIANLL  267 (401)
T ss_pred             HHHHHHHHHHHHhc--CCCceeeccCCcccEEeeC--CCcEEEeccccccCChHHHHHHHHHHHH
Confidence            45555566554443  4678999999999999974  5699999999999999999999988753

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=98.85  E-value=2.7e-09  Score=100.48  Aligned_cols=81  Identities=31%  Similarity=0.546  Sum_probs=72.2

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC------CCCcchHHHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM------KTPKLWSTGKHML  259 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~------~~p~lw~~i~kwl  259 (317)
                      ..+..|++.|++|++++.|++|+|++||+|++++..++.+|.+...||+.|++||++..+.      ..|.+|..+.+|+
T Consensus        52 ~~~~~l~~~g~~P~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~  131 (302)
T cd05156          52 VVFARLSERNLGPKLYGIFPNGRIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWL  131 (302)
T ss_pred             HHHHHHHhCCCCCceEEEeCCCchhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999999999999999987642      4577999999999


Q ss_pred             hhccccC
Q psy8745         260 SLIPRTY  266 (317)
Q Consensus       260 ~~~~~~f  266 (317)
                      ...+...
T Consensus       132 ~~~~~~~  138 (302)
T cd05156         132 DLAETVI  138 (302)
T ss_pred             HHhhhhh
Confidence            8877653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.80  E-value=1.5e-08  Score=92.34  Aligned_cols=59  Identities=24%  Similarity=0.425  Sum_probs=47.3

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYL  114 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL  114 (317)
                      .+.++||+|++++|||+++  +++ .+|||++|++++|++|||.....+            +...+..|++.|.
T Consensus       162 ~~~~l~HGD~~~~Nvlv~~--~~i~giIDw~~a~~gDp~~Dla~~~~~~------------~~~~~~~~~~~y~  221 (235)
T cd05155         162 GPPVWFHGDLAPGNLLVQD--GRLSAVIDFGCLGVGDPACDLAIAWTLL------------DEDSRAAFRAALG  221 (235)
T ss_pred             CCceEEeCCCCCCcEEEEC--CCEEEEEeCcccCcCChHHHHHHHHhcC------------CHHHHHHHHHHcC
Confidence            6789999999999999974  455 599999999999999999764421            2355677777776

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=98.77  E-value=6.8e-08  Score=91.09  Aligned_cols=63  Identities=29%  Similarity=0.362  Sum_probs=50.4

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE  116 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~  116 (317)
                      ..+.++||+|++++|||+++ ++++ .+||||.|+.++|++|||..+.-            -+.+....|++.|-.+
T Consensus       182 ~~~~~lvHGD~~~~Nilv~~-~~~~~gviDWe~a~iGDPa~Dla~~~~~------------~~~~~~~~~~~~Y~~~  245 (276)
T cd05152         182 PRHTVLVHGDLHPGHILIDE-DARVTGLIDWTEAKVGDPARDFVLHYRI------------FGEAGLERLIDAYEAA  245 (276)
T ss_pred             CCCCeeEeCCCCCCcEEEeC-CCCEEEEECcHhcccCCHHHHHHHHHHh------------cChHHHHHHHHHHHHc
Confidence            45679999999999999975 3555 49999999999999999976441            1346677888888865

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK11768 serine/threonine protein kinase; Provisional

Probab=98.76  E-value=7.8e-08  Score=92.48  Aligned_cols=119  Identities=15%  Similarity=0.119  Sum_probs=73.0

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS  120 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~  120 (317)
                      ..+.++||+|++++|||++  + .+.|||||.|+++++.+||+..+....        . ...+....|++.|-+.   +
T Consensus       193 ~~~~~liHgD~h~~NvL~~--d-~~~iIDFDd~~~g~~i~DLa~~l~~~~--------~-~~~~~~~~~l~GY~~~---r  257 (325)
T PRK11768        193 DVRLLRLHGDCHPGNILWR--D-GPHFVDLDDARMGPAVQDLWMLLSGDR--------A-EQLMQLETLLEGYEEF---C  257 (325)
T ss_pred             CCCccceecCCCchhcccc--C-CcEEEeCCCCCCCCHHHHHHHHhccCc--------c-hhHHHHHHHHHHhhcc---C
Confidence            4678999999999999994  2 588999999999999999998764210        0 1134455566666553   5


Q ss_pred             CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcC--C---CCCCHHHHHHHHHHHHHHhHh
Q psy8745         121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHS--D---IEFDFFQYASSTYQGYVLKRD  178 (317)
Q Consensus       121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s--~---~~fDy~~Ya~~R~~~y~~~k~  178 (317)
                      +++++|++.+. -+....++...   .|..-+-...  +   ..|.=-.|....+....++..
T Consensus       258 ~l~~~e~~~l~-~l~~lR~~~~~---~W~~~r~~d~~~~~~f~~~~~~~~w~~~~~~~~~~~~  316 (325)
T PRK11768        258 EFDPRELALIE-PLRALRLIHYS---AWLARRWDDPAFPKAFPWFGTEDYWEQQILELREQLA  316 (325)
T ss_pred             CCCHHHHHHHH-HHHHHHHHHHH---HHHhhcCCCcchhhcCCCCCCchHHHHHHHHHHHHHH
Confidence            67887766543 22333443333   3333222210  1   244555666666655444433

>PRK12396 5-methylribose kinase; Reviewed

Probab=98.72  E-value=4.6e-08  Score=96.83  Aligned_cols=62  Identities=21%  Similarity=0.339  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh
Q psy8745          25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA   90 (317)
Q Consensus        25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~   90 (317)
                      .|+.|+..|+..+.+  ....++|+||++|||++++  +.+++||.|+|.|||++||||+++....
T Consensus       210 ~Lk~ev~~Lk~~F~~--~~~aLlHGDlHtGSI~v~~--~~~kvIDpEFAfyGP~gFDiG~~lanll  271 (409)
T PRK12396        210 ELRLEVAKLKFSFMT--NAQALIHGDLHTGSVFVKN--DSTKVIDPEFAFYGPMGYDIGNVMANLM  271 (409)
T ss_pred             HHHHHHHHHHHHHHh--cchhhccCcCCCCCEEecC--CceEEEcccccccCCcHHHHHHHHHHHH
Confidence            345556666655444  5689999999999999974  6799999999999999999999887643

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=98.71  E-value=4.2e-08  Score=91.98  Aligned_cols=68  Identities=25%  Similarity=0.417  Sum_probs=52.5

Q ss_pred             cCCCCeeeeecCCCCCCeeeeCCC----CeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8745          39 KTKSPVVFCHNDLLLGNIIYDETE----DKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYL  114 (317)
Q Consensus        39 ~~~~~~v~CHnDl~~~NiL~~~~~----~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL  114 (317)
                      ......|+||+|++.+|||+..++    .++.+|||+++++++|+.||+.++....           +.+.+....+.+|
T Consensus       210 ~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~~Dl~~fl~~s~-----------~~~~r~~~~~~ll  278 (294)
T PF02958_consen  210 SKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPAIDLAYFLYTSL-----------DPELRREHEDELL  278 (294)
T ss_pred             ccCCceEEEcCccCHHhEeEccccccccccceeeccccccCCCcHhHHHHHHHHCC-----------CHHHHHHHHHHHH
Confidence            345678999999999999995432    2699999999999999999999987532           3455555555555


Q ss_pred             HHh
Q psy8745         115 EEY  117 (317)
Q Consensus       115 ~~y  117 (317)
                      +.|
T Consensus       279 ~~Y  281 (294)
T PF02958_consen  279 RHY  281 (294)
T ss_pred             HHH
Confidence            555

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=98.67  E-value=8.8e-08  Score=93.80  Aligned_cols=46  Identities=30%  Similarity=0.408  Sum_probs=41.3

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      ....+|||||+++||++++  +.+.+||||+|.+|+++||||.++.+.
T Consensus       190 ~~~~llHGDl~~gNi~~~~--~~~~~iD~e~~~~G~~~~Dlg~~ianL  235 (370)
T TIGR01767       190 SAETLLHGDLHSGSIFVSE--HETKVIDPEFAFYGPIGFDIGQFIANL  235 (370)
T ss_pred             CcceeeeccCCcccEEEcC--CCCEEEcCcccccCchHhhHHHHHHHH
Confidence            4679999999999999964  568999999999999999999998764

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02876 acyl-CoA dehydrogenase

Probab=98.57  E-value=4.3e-07  Score=97.58  Aligned_cols=114  Identities=16%  Similarity=0.237  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHhcCCC---CeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCC---CCC--
Q psy8745          25 QLQSDWQYIETALSKTKS---PVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGV---SPI--   95 (317)
Q Consensus        25 ~L~~e~~~L~~~l~~~~~---~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~---~~~--   95 (317)
                      .+.+-+.||...+.....   +.++||+|++++|+|++.++++| .|||||+|+.++|.+|||.++.-|...   ...  
T Consensus       203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~  282 (822)
T PLN02876        203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQV  282 (822)
T ss_pred             hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCcccc
Confidence            344445677665544322   57999999999999997544555 599999999999999999987755431   000  


Q ss_pred             ----CC----CCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHH
Q psy8745          96 ----DH----SRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWG  149 (317)
Q Consensus        96 ----d~----~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWa  149 (317)
                          ..    ..+|+   +.++++.|.+.- |.++....       +..|..++.|-|++-.
T Consensus       283 ~~~~~~~~~~~G~p~---~~e~~~~Y~~~~-g~~~~~~~-------~~~~~~~~~~r~a~I~  333 (822)
T PLN02876        283 GKGFEFTGIPEGIPS---LPEYLAEYCSAS-GKPWPAAN-------WKFYVAFSLFRGASIY  333 (822)
T ss_pred             ccccccCcCCCCCCC---HHHHHHHHHHHh-CCCCCCcc-------cHHHHHHHHHHHHHHH
Confidence                01    13455   567888998864 44332121       3345666666655544

>PRK06149 hypothetical protein; Provisional

Probab=98.56  E-value=1e-06  Score=96.35  Aligned_cols=178  Identities=15%  Similarity=0.065  Sum_probs=111.7

Q ss_pred             CCCeeeeecCCCCCCeeeeCCC-Ce---EEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETE-DK---VTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE  116 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~-~~---l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~  116 (317)
                      ..+..+||||++..||+++++. +.   ..||||+.++++++.+|||-.+..++....      ++......|++.|-+.
T Consensus       205 ~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~~~~i~DLAial~~~~~~~~------~dp~~~~~~l~GY~sv  278 (972)
T PRK06149        205 ALPLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVRTWRVADLAVTCASLLHHAG------GDPFSILPAVRAYHAV  278 (972)
T ss_pred             hCcccccCCCCCcccEEEcCCCCCCcceeEEEEcccchhhhHHHHHHHHHHHHhcccC------CCHHHHHHHHHHHHhc
Confidence            4688999999999999997532 22   359999999999999999998876653111      1223345677777665


Q ss_pred             hcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcCCCCCcc--hhhhhc
Q psy8745         117 YTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSP--QILHRA  194 (317)
Q Consensus       117 y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~~e~~~~--~~L~~~  194 (317)
                         ++++++|++.|+.-    ..+-...-..|+..|+...+.+    .|........++..+.+.++.+..+  .+...-
T Consensus       279 ---rpLt~~E~~~L~~l----i~~R~~~~~~~~~~~~~~~p~n----~Y~~~~~~~~w~~l~~~~~~~~~~~~~~~~~a~  347 (972)
T PRK06149        279 ---RPLSEAELKALWPL----VVARAAVLVASSEQQLAVDPDN----AYVRDNLAHEWEIFDVATSVPFALMEAAILAAL  347 (972)
T ss_pred             ---CCCCHHHHHHHHHH----HHHHHHHHHHHHHHHhhhCCCC----hhhhhccHHHHHHHHHHHhCCHHHHHHHHHHHc
Confidence               57899999887632    3333333445666666655433    5777777777777777766544322  333334


Q ss_pred             CCCCceEEEecCceEEEeec------Ccc------------CCCCCCCCcccHHHHHHHHHhhcc
Q psy8745         195 GLAPRLYAEFDNGLVYQYVR------GVT------------ITPDSIREPHIHPLVARNMARLHK  241 (317)
Q Consensus       195 ~~gp~l~g~F~nG~~e~fi~------g~t------------L~~~~l~~~~i~~~IA~~la~~H~  241 (317)
                      |+.+.=      .++..|-|      +..            ++...+.++.....++.++++-+.
T Consensus       348 g~~~~~------~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (972)
T PRK06149        348 GFDPPP------PDLSGWAPLLPGLDPASVALVDLSVLSPHFSAGNWEQPGIDWRLLASAAAAGG  406 (972)
T ss_pred             CCCCCc------chhhhhhhhcccccCCcceeccccccccccccCCCCCCChhhHHHHHHHhcCC
Confidence            443322      33333332      222            234455566666677777777554

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.54  E-value=1.6e-07  Score=86.54  Aligned_cols=79  Identities=22%  Similarity=0.145  Sum_probs=67.9

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCCCCCcchHHHHHHHhhccc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPR  264 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~~~p~lw~~i~kwl~~~~~  264 (317)
                      ..++.|++.|++|++++.+++|+|++||+|++++..++.++.....+|+.|+++|++..++....++..+.+|...+..
T Consensus        43 ~~l~~l~~~g~~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~  121 (256)
T TIGR02721        43 QILQALSALGLAPKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDP  121 (256)
T ss_pred             HHHHHHHhcCCCCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccc
Confidence            4456788899999999999999999999999999999999999999999999999987765444567788888766654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK06148 hypothetical protein; Provisional

Probab=98.54  E-value=8e-07  Score=97.53  Aligned_cols=129  Identities=14%  Similarity=0.059  Sum_probs=86.9

Q ss_pred             CCCeeeeecCCCCCCeeeeCCC-CeEE-EEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETE-DKVT-FIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT  118 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~-~~l~-lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~  118 (317)
                      ..|..+||||+++.|||++++. +++. ||||+.++++++.+|||..+.-++...   .   ...+....|++.|-+.  
T Consensus       200 ~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~~~v~DLAialay~~~~~---~---~p~~~~~a~laGY~sv--  271 (1013)
T PRK06148        200 ALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVHAPRICEVAIAAAYAILDH---P---DPIGAAAALVAGYHAV--  271 (1013)
T ss_pred             cCCcceECCCCCcccEEEcCCCCcceEEEEECcccccccHHHHHHHHHHHHhcCC---C---ChHHHHHHHHHHHhhc--
Confidence            4678899999999999997632 2566 999999999999999999875333211   0   1123455788888876  


Q ss_pred             CCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcCCCCC
Q psy8745         119 GSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPP  186 (317)
Q Consensus       119 ~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~~e~~  186 (317)
                       ++++++|++.|+.    +..+-...-.+|+..++...+.+    .|...-....+...+.+.++.+.
T Consensus       272 -~pLt~~E~~~L~~----li~~R~~~s~~~~~~~~~~~P~n----~Y~~~~~~~~w~~l~~~~~~~~~  330 (1013)
T PRK06148        272 -YPLQAQELDLLFD----LIRMRLAVSVTNSASRREQTPDN----PYLAISEAPAWRLLERLDAMNPR  330 (1013)
T ss_pred             -CCCCHHHHHHHHH----HHHHHHHHHHHHHHHhhhcCCCC----hhhhhccHHHHHHHHHHHhCCHH
Confidence             5789999888763    23333334446666666665544    46555555566666666555553

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.43  E-value=8.3e-07  Score=72.16  Aligned_cols=45  Identities=42%  Similarity=0.673  Sum_probs=41.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      .++||+|++++||++++ .+.+.+|||+.+.++++.+|++.+++-+
T Consensus       108 ~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~~~~~~d~~~~~~~~  152 (155)
T cd05120         108 LVLCHGDLHPGNILVDD-GKILGIIDWEYAGYGPPAFDLAAALLFN  152 (155)
T ss_pred             eEEEecCCCcceEEEEC-CcEEEEEecccccCCChHHHHHHHHHHh
Confidence            68999999999999986 6889999999999999999999998754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN02756 S-methyl-5-thioribose kinase

Probab=98.38  E-value=1.3e-06  Score=86.99  Aligned_cols=60  Identities=22%  Similarity=0.349  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745          25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE   88 (317)
Q Consensus        25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E   88 (317)
                      .|+.++..|+..+.+  ....++|+||++|||++++  ++..+||-|+|-|||++||||.++..
T Consensus       213 ~L~~~v~~Lk~~f~~--~~~~L~HGDl~~g~i~~~~--~~~~~id~ef~~~g~~~~d~g~~~~~  272 (418)
T PLN02756        213 ILKLEIAELKSMFCE--RAQALVHGDLHTGSVMVTP--DSTQVIDPEFAFYGPMGFDIGAFLGN  272 (418)
T ss_pred             HHHHHHHHHHHHHHh--cccceeecCCCCCcEEEcC--CCceEecchhhccCchHHhHHHHHhh
Confidence            455666666655444  4579999999999999975  56999999999999999999997664

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=98.38  E-value=2.8e-06  Score=84.74  Aligned_cols=82  Identities=26%  Similarity=0.270  Sum_probs=61.6

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCC---eEE-EEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETED---KVT-FIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE  116 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~---~l~-lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~  116 (317)
                      +.+.|+||+||+..|||++.+++   .+. +|||..+..+.|+.||+..++-.+           +.+.|+.--+.+|+.
T Consensus       265 G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~l-----------S~edRR~~~~~lL~~  333 (414)
T PF07914_consen  265 GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCL-----------SGEDRREHTEELLEY  333 (414)
T ss_pred             CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcC-----------CHHHHHHHHHHHHHH
Confidence            55889999999999999986443   344 999999999999999999988543           355666655666655


Q ss_pred             hc-----------CCCCCHHHHHHHHHh
Q psy8745         117 YT-----------GSPPSPHQLATLHWQ  133 (317)
Q Consensus       117 y~-----------~~~~s~~ev~~l~~~  133 (317)
                      |.           ..+.|-+++...|..
T Consensus       334 Yy~~f~~~l~~~~~~PfT~eqL~~sY~l  361 (414)
T PF07914_consen  334 YYDTFTEALEDGGKAPFTLEQLKDSYRL  361 (414)
T ss_pred             HHHHHHHHHhccCCCCccHHHHHHHHHH
Confidence            53           245666777776653

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>PRK10593 hypothetical protein; Provisional

Probab=98.35  E-value=1.4e-06  Score=82.92  Aligned_cols=70  Identities=14%  Similarity=0.293  Sum_probs=51.5

Q ss_pred             HHHHHhcCCCCeeeeecCCCCCCeeeeCCCCe-EEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHH
Q psy8745          33 IETALSKTKSPVVFCHNDLLLGNIIYDETEDK-VTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLR  111 (317)
Q Consensus        33 L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~-l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~  111 (317)
                      +.+.|.....+.++||+|++++|+|++...+. ..+||+.-+.|+++-+||+..+.  .+             ....|++
T Consensus       182 l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~rE~DLa~~~~--~~-------------f~~~f~~  246 (297)
T PRK10593        182 LPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPREYELFRLMD--NG-------------LAEQLLW  246 (297)
T ss_pred             chhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCHHHhHHHhhc--CC-------------ccHHHHH
Confidence            33444444456799999999999999753344 78999999999999999987641  11             1236788


Q ss_pred             HHHHHh
Q psy8745         112 TYLEEY  117 (317)
Q Consensus       112 ~YL~~y  117 (317)
                      .|.+.+
T Consensus       247 ~Y~~~~  252 (297)
T PRK10593        247 RYLQKA  252 (297)
T ss_pred             HHHHhC
Confidence            888875

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=98.22  E-value=3.8e-06  Score=81.16  Aligned_cols=61  Identities=23%  Similarity=0.269  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHH
Q psy8745          25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF   86 (317)
Q Consensus        25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~   86 (317)
                      .+...+.|++........+.++.|+|++++|||+++ ++.+-|||||.++.++|..|++.++
T Consensus       179 ~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~-~~~~gVlDwe~~~lGDP~~Dl~~~~  239 (321)
T COG3173         179 LADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDP-GRPTGVLDWELATLGDPLEDLAIIC  239 (321)
T ss_pred             hHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeC-CCeeEEEeccccccCCcHHHHHHHH
Confidence            344446777776555678899999999999999986 4558899999999999999999986

>TIGR02905 spore_yutH spore coat protein YutH

Probab=98.19  E-value=6.4e-06  Score=78.93  Aligned_cols=96  Identities=14%  Similarity=0.139  Sum_probs=72.2

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh-CCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA-GVSPIDHSRYPGPEFQLSWLRTYLEEYTGS  120 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~-~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~  120 (317)
                      ...++||+|+..+|+| .  ++++.+|+||++ +++|..||++++...+ ....  +    +-+.-..+|+.|-+.   .
T Consensus       187 ~~~~lCH~d~~~hn~l-~--~~~~~~i~~d~~-~D~~~~DL~~firk~~~k~~~--~----~~~~~~~~l~~Y~~~---~  253 (313)
T TIGR02905       187 DSGTICHERFGETTWL-E--RGGLIKPPTEWV-YDHPARDLAEWIRERYMGEIR--Q----NQRAIASFLQEYEQA---A  253 (313)
T ss_pred             ccCccccCccCccccc-c--CCCeEecccccc-cccchhHHHHHHHHHHHHhcc--c----cHHHHHHHHHHhhhc---C
Confidence            4569999999999987 3  477999999955 9999999999999854 2111  1    134556677777765   5


Q ss_pred             CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745         121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE  154 (317)
Q Consensus       121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~  154 (317)
                      +++++|.+.|+    .+.++++-||-+=--+...
T Consensus       254 pL~~~e~~~l~----~~L~FP~~fwk~~~~Yy~~  283 (313)
T TIGR02905       254 PLTPFSWRLMY----ARLLFPLHYFETIENYYIA  283 (313)
T ss_pred             CCCHHHHHHHH----HHHcCcHHHHHHHHHHHhC
Confidence            78999999887    4688999998876555543

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=97.82  E-value=0.00014  Score=69.68  Aligned_cols=106  Identities=22%  Similarity=0.345  Sum_probs=71.5

Q ss_pred             CCCeeeeecCCCCCCeeeeCC---CCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8745          41 KSPVVFCHNDLLLGNIIYDET---EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY  117 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y  117 (317)
                      ..+.|+||+|.++-|||+...   .+++-+|||.-|.++|.+||++..+... ..+   +    +++.....+..|+.+.
T Consensus       197 ~~~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DA-rvt---~----~pe~~~~~l~rY~~~r  268 (351)
T COG3178         197 AQPKVLVHRDFHSRNLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDA-RVT---W----SPERELALLDRYWAAR  268 (351)
T ss_pred             cCCceeeeccccCccceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhc-ccc---C----CHHHHHHHHHHHHHhh
Confidence            578999999999999999642   2489999999999999999999988752 211   2    3677788999999886


Q ss_pred             c--CCCCCHHHHHHHHHhhhhhhhhhHH-HHHHHHHHHhhcCC
Q psy8745         118 T--GSPPSPHQLATLHWQVQQFSPVAHC-FWTIWGLVQAEHSD  157 (317)
Q Consensus       118 ~--~~~~s~~ev~~l~~~v~~~~l~shl-~W~lWaliq~~~s~  157 (317)
                      .  |.+.++   ..++.....+..--|+ .=++|+-+-...++
T Consensus       269 ~~~g~p~d~---~~Flra~~~MgaQR~~KvlGIFaRL~~RDGK  308 (351)
T COG3178         269 RAAGLPFDE---AAFLRAYAWMGAQRHLKVLGIFARLYYRDGK  308 (351)
T ss_pred             hhcCCCcCH---HHHHHHHHHHHHHHHhHHHHHhhhhhhccCC
Confidence            4  222222   3333222222222222 34677766666554

>COG4857 Predicted kinase [General function prediction only]

Probab=97.76  E-value=9.3e-05  Score=70.52  Aligned_cols=59  Identities=27%  Similarity=0.317  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE   88 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E   88 (317)
                      |+-|+..|+..+..  ....+||+||+.|.|++++  ....+||=|+|.|||-+||||+++..
T Consensus       212 lkvea~kLk~~F~~--~aetLiHGDLHsGSIfvte--~etkvIDPEFaFYGPmafDiG~~iaN  270 (408)
T COG4857         212 LKVEAQKLKHKFMA--YAETLIHGDLHSGSIFVTE--KETKVIDPEFAFYGPMAFDIGMLIAN  270 (408)
T ss_pred             hhhhHHHHHHHHHH--HhHHHhccccccCcEEeec--CcceeeCccccccCcchhhHHHHHHH
Confidence            44445555554433  3457999999999999975  66899999999999999999998875

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.70  E-value=0.00013  Score=64.39  Aligned_cols=83  Identities=20%  Similarity=0.247  Sum_probs=53.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCC--HHHHHHHHHHHHHHhcCCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPG--PEFQLSWLRTYLEEYTGSP  121 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~--~e~~~~fi~~YL~~y~~~~  121 (317)
                      ..++|+|++|+|||++  ++.+.+|||+.+....+.+|.+.-+..+...  . ...+|.  .+....|+..|...+   .
T Consensus       114 ~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~f~~gY~~~~---~  185 (211)
T PRK14879        114 AGIIHGDLTTSNMILS--GGKIYLIDFGLAEFSKDLEDRAVDLHVLLRS--L-ESTHPDWAEELFEAFLEGYREVM---G  185 (211)
T ss_pred             CCcccCCCCcccEEEE--CCCEEEEECCcccCCCcHHhhhccHHHHHHH--h-hccCcchHHHHHHHHHHHHHHhh---c
Confidence            4689999999999997  4789999999999999998887644332210  0 001232  244556677776643   2


Q ss_pred             CCHHHHHHHHHhh
Q psy8745         122 PSPHQLATLHWQV  134 (317)
Q Consensus       122 ~s~~ev~~l~~~v  134 (317)
                      .+.+++...+..+
T Consensus       186 ~~~~~~~~~~~~i  198 (211)
T PRK14879        186 EKAEEVLERVKEI  198 (211)
T ss_pred             ccHHHHHHHHHHH
Confidence            3445555444443

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.67  E-value=0.0001  Score=64.61  Aligned_cols=41  Identities=29%  Similarity=0.369  Sum_probs=36.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHH
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF   86 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~   86 (317)
                      ..++|+|++++||+++  ++++.+|||+.+....+..|.+.-+
T Consensus       109 ~gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~~~~~~~~~~~~  149 (199)
T TIGR03724       109 AGIVHGDLTTSNIIVR--DDKLYLIDFGLGKYSDEIEDKAVDL  149 (199)
T ss_pred             CCeecCCCCcceEEEE--CCcEEEEECCCCcCCCcHHhhhchH
Confidence            4689999999999997  5789999999999999998887544

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.44  E-value=0.00047  Score=61.98  Aligned_cols=64  Identities=22%  Similarity=0.225  Sum_probs=44.3

Q ss_pred             CeeeeecCCCCCCeeeeCCC--CeEEEEeeccccCCc-----hhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHH
Q psy8745          43 PVVFCHNDLLLGNIIYDETE--DKVTFIDYEYAGVNY-----QAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTY  113 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~n~-----~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~Y  113 (317)
                      ...++|+||+++|||++.++  .++++||+|-+....     +.-||+.+......   .    .-+.++...|++.|
T Consensus       136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~~~~~~~~dL~~L~rs~~~---~----~~~~~d~~~fl~~Y  206 (206)
T PF06293_consen  136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPSSRRWRAKDLARLLRSLLR---S----GWSERDRQRFLRGY  206 (206)
T ss_pred             HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCCChHHHHHhHHHHHHhccc---c----CCCHHHHHHHHhhC
Confidence            46899999999999998632  269999999988877     45566665443211   1    12456666777665

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.37  E-value=0.00031  Score=66.95  Aligned_cols=75  Identities=17%  Similarity=0.282  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHH
Q psy8745          28 SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQL  107 (317)
Q Consensus        28 ~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~  107 (317)
                      +-++.+.+.+.....+.+++|+||+.||++.+. ++..+|||=- |-|+++-+|||..  +.  +     ..+     -.
T Consensus       172 ~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~-~g~p~l~DPa-~yygh~E~DLam~--~l--f-----ggf-----~~  235 (288)
T PF03881_consen  172 RLVERLPSLLPGREPKPSLLHGDLWSGNVGFDA-DGEPVLFDPA-CYYGHREVDLAMT--RL--F-----GGF-----PD  235 (288)
T ss_dssp             HHHHHHHHCCTTS----EEE-SS-SGGGEEEET-TE-EEE-S----EEE-CHHHHHHH--CC--C-----STT-----HH
T ss_pred             HHHHHHHHHhcCCCCCceeeEcCccccceeecC-CCCceeeccc-cccCchHhhhhhh--hh--h-----CCC-----CH
Confidence            333445555554556779999999999999987 4779999987 8899999999963  11  1     111     24


Q ss_pred             HHHHHHHHHhc
Q psy8745         108 SWLRTYLEEYT  118 (317)
Q Consensus       108 ~fi~~YL~~y~  118 (317)
                      .|++.|.+.+.
T Consensus       236 ~f~~~Y~~~~P  246 (288)
T PF03881_consen  236 EFYDAYQEHYP  246 (288)
T ss_dssp             HHHHHHHHHS-
T ss_pred             HHHHHHHhcCC
Confidence            68899998863

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.30  E-value=0.00036  Score=59.14  Aligned_cols=59  Identities=19%  Similarity=0.396  Sum_probs=51.3

Q ss_pred             CcchhhhhcCCCCceEEEec--CceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         186 PSPQILHRAGLAPRLYAEFD--NGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~--nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      ..+..|+..++.|++++.+.  +++|.+||+|+++...+..++.+...+|+.|+++|....
T Consensus        44 ~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~  104 (170)
T cd05151          44 ENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHSSPL  104 (170)
T ss_pred             HHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccccccCHHHHHHHHHHHHHHhCCCC
Confidence            34456777789999999998  899999999999987777888899999999999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.09  E-value=0.003  Score=57.01  Aligned_cols=68  Identities=24%  Similarity=0.335  Sum_probs=47.8

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHH----HHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIAN----HFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT  118 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn----~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~  118 (317)
                      ...+||+||.++||++.+  ++++||||-.+..+.-.-|.|-    ++...      .-+++..++....|++.|.+.+.
T Consensus       110 ~~givHGDLTtsNiIl~~--~~i~~IDfGLg~~s~~~Ed~aVDl~Vleral------~sth~~~e~l~~~f~~gY~~~~~  181 (204)
T COG3642         110 KAGIVHGDLTTSNIILSG--GRIYFIDFGLGEFSDEVEDKAVDLHVLERAL------ESTHEKAEELFAAFLEGYREEFG  181 (204)
T ss_pred             hcCeecCCCccceEEEeC--CcEEEEECCcccccccHHhhhchHHHHHHHH------HhccccHHHHHHHHHHHHHHHhc
Confidence            368999999999999974  5699999999988866555553    33321      11223345666778888887764

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=97.09  E-value=0.004  Score=58.37  Aligned_cols=53  Identities=25%  Similarity=0.198  Sum_probs=42.5

Q ss_pred             HHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          35 TALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        35 ~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      +.|-....+.++.|+||+.+|||... ......||=.-.- ++|+||++++|++.
T Consensus       151 ~~Ll~~~~~~~lLHGDLH~~NIL~~~-~~~WlaIDPkgl~-Gdp~yd~a~~l~n~  203 (253)
T PF04655_consen  151 RELLASPGEEVLLHGDLHHGNILAAG-RRGWLAIDPKGLV-GDPAYDLAPLLRNP  203 (253)
T ss_pred             HHHhcCCCcceeeccccchHhhhccC-CCCceEeCCcccc-cccccCHHHHHhCc
Confidence            33434556789999999999999865 4678899987665 99999999998853

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.88  E-value=0.0013  Score=67.32  Aligned_cols=41  Identities=24%  Similarity=0.314  Sum_probs=36.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHH
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF   86 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~   86 (317)
                      ..++|+|++|.|||++  ++.+++|||+.|...++..|++..+
T Consensus       447 ~giiHrDlkp~NILl~--~~~~~liDFGla~~~~~~~d~a~~l  487 (535)
T PRK09605        447 AGIVHGDLTTSNFIVR--DDRLYLIDFGLGKYSDLIEDKAVDL  487 (535)
T ss_pred             CCCccCCCChHHEEEE--CCcEEEEeCcccccCCchHhhhhhH
Confidence            4689999999999994  5789999999999999999998855

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.75  E-value=0.0016  Score=59.61  Aligned_cols=78  Identities=15%  Similarity=0.310  Sum_probs=59.0

Q ss_pred             CcchhhhhcCC-CCceEEEecC----ceEEEeecCcc-----CCCCCCCCcccHHHHHHHHHhhcccCCCC-CCCcchHH
Q psy8745         186 PSPQILHRAGL-APRLYAEFDN----GLVYQYVRGVT-----ITPDSIREPHIHPLVARNMARLHKVHSNM-KTPKLWST  254 (317)
Q Consensus       186 ~~~~~L~~~~~-gp~l~g~F~n----G~~e~fi~g~t-----L~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p~lw~~  254 (317)
                      ..+..|...|+ .|+.++.-..    |++.++|+|.+     +.......+.+...+|+.|+++|.+.++. ..|..+..
T Consensus        44 ~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~  123 (226)
T TIGR02172        44 DASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEK  123 (226)
T ss_pred             HHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHH
Confidence            55567888999 7999988766    99999999985     33333334568899999999999986653 45567888


Q ss_pred             HHHHHhhcc
Q psy8745         255 GKHMLSLIP  263 (317)
Q Consensus       255 i~kwl~~~~  263 (317)
                      ++++++...
T Consensus       124 ~~~~l~~~~  132 (226)
T TIGR02172       124 IRKFIEEKD  132 (226)
T ss_pred             HHHHHHhcc
Confidence            888886544

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=96.72  E-value=0.0083  Score=56.63  Aligned_cols=66  Identities=20%  Similarity=0.256  Sum_probs=47.0

Q ss_pred             CeeeeecCCCCCCeeeeC------CCCeEEEEeeccccC------CchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHH
Q psy8745          43 PVVFCHNDLLLGNIIYDE------TEDKVTFIDYEYAGV------NYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWL  110 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~------~~~~l~lIDfEya~~------n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi  110 (317)
                      ...++|+||+++|||++.      .+..++|||+|-+..      ..+.-|++.+......   .    .-+......|+
T Consensus       156 ~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s~~~---~----~ls~~d~~~fl  228 (268)
T PRK15123        156 AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQIRARVPRRWRDKDLAGLYFSAMD---I----GLTQRDILRFL  228 (268)
T ss_pred             HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccccCCCChHHHHHHHHHHHHHhcc---c----CCCHHHHHHHH
Confidence            468999999999999974      145799999998732      3556888887654321   1    12466677788


Q ss_pred             HHHHH
Q psy8745         111 RTYLE  115 (317)
Q Consensus       111 ~~YL~  115 (317)
                      ..|..
T Consensus       229 ~~Y~~  233 (268)
T PRK15123        229 RVYFG  233 (268)
T ss_pred             HHHhC
Confidence            87775

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.59  E-value=0.012  Score=54.29  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=29.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      ..++|+|++|+|||++. ++.++||||+.+....+
T Consensus       161 ~GI~HrDlkp~NILv~~-~~~v~LIDfg~~~~~~~  194 (239)
T PRK01723        161 AGVYHADLNAHNILLDP-DGKFWLIDFDRGELRTP  194 (239)
T ss_pred             CCCCCCCCCchhEEEcC-CCCEEEEECCCcccCCC
Confidence            46899999999999976 56899999998887654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.59  E-value=0.0063  Score=55.90  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             CeeeeecCC-CCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          43 PVVFCHNDL-LLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        43 ~~v~CHnDl-~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      ...++|+|| .++|||+++ ++.++||||..|....+
T Consensus       109 ~~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274        109 RCGVAHNDLAKEANWLVQE-DGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             HCcCccCCCCCcceEEEcC-CCCEEEEECCCceecCC
Confidence            347999999 799999975 57899999999886554

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=96.35  E-value=0.0042  Score=54.79  Aligned_cols=31  Identities=32%  Similarity=0.296  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|+||+++  +++++||||..|..-
T Consensus       137 ~givHrDlkP~NIll~--~~~~~liDFG~a~~~  167 (190)
T cd05145         137 AGLVHGDLSEYNILYH--DGKPYIIDVSQAVEL  167 (190)
T ss_pred             CCEecCCCChhhEEEE--CCCEEEEEcccceec
Confidence            5899999999999997  478999999988753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK09902 hypothetical protein; Provisional

Probab=96.31  E-value=0.016  Score=53.15  Aligned_cols=63  Identities=16%  Similarity=0.026  Sum_probs=46.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCe--EEEEeeccccCCc-----hhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDK--VTFIDYEYAGVNY-----QAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLE  115 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~--l~lIDfEya~~n~-----~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~  115 (317)
                      ...++|+|+++.||+++. +++  +.|||||=+....     ..-||+.+.....+         .++.++..|+..|+.
T Consensus       146 ~~Gv~Hgdly~khIll~~-~g~~~v~lIDlEk~r~~l~~~~~~~~Dl~~l~r~~~~---------~s~~~~~~~~~~y~~  215 (216)
T PRK09902        146 SVNRQHGCCYVRHIYVKT-EGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEP---------IPKADWEQVKAYYYA  215 (216)
T ss_pred             HCCCcCCCCCHhheeecC-CCCeeEEEEEhhccchhhhhhhhhHhHHHHHHHhccC---------CCHHHHHHHHHHHhc
Confidence            468999999999999974 345  9999999876544     46688776543111         246778888888873

>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]

Probab=96.28  E-value=0.015  Score=53.49  Aligned_cols=47  Identities=30%  Similarity=0.319  Sum_probs=38.2

Q ss_pred             CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745          40 TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE   88 (317)
Q Consensus        40 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E   88 (317)
                      ....+++.|+||+.+|||-.+ .....+||=--. ++.++||.||.||+
T Consensus       157 ~p~di~pLHGDlHH~Nild~~-~rGWlvIDPkgl-~Gdrg~D~ANlf~N  203 (274)
T COG3570         157 TPRDIRPLHGDLHHGNILDGD-RRGWLVIDPKGL-IGDRGFDYANLFCN  203 (274)
T ss_pred             CccccccCcccccccccccCC-cCceEEEccccc-cCccccchHhhhcC
Confidence            355789999999999998754 346889997554 48999999999985

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=96.09  E-value=0.0048  Score=54.84  Aligned_cols=29  Identities=28%  Similarity=0.391  Sum_probs=25.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|+|||+++  +.++||||-.|.
T Consensus       137 ~giiHrDlkP~NIli~~--~~v~LiDFG~a~  165 (190)
T cd05147         137 CRLVHADLSEYNLLYHD--GKLYIIDVSQSV  165 (190)
T ss_pred             CCcccCCCCHHHEEEEC--CcEEEEEccccc
Confidence            46999999999999973  789999998765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05119 RIO RIO kinase family, catalytic domain

Probab=95.96  E-value=0.007  Score=52.29  Aligned_cols=29  Identities=38%  Similarity=0.371  Sum_probs=25.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|+||+++  ++.+.+|||..|.
T Consensus       134 ~~ivH~Dl~p~Nili~--~~~~~liDfg~a~  162 (187)
T cd05119         134 AGLVHGDLSEYNILVD--DGKVYIIDVPQAV  162 (187)
T ss_pred             cCcCcCCCChhhEEEE--CCcEEEEECcccc
Confidence            5689999999999998  5789999998775

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.80  E-value=0.0098  Score=54.05  Aligned_cols=60  Identities=17%  Similarity=0.117  Sum_probs=48.6

Q ss_pred             CcchhhhhcCCCCceEEEecC----ceEEEeecCccCCCCC--CCCcccHHHHHHHHHhhcccCCC
Q psy8745         186 PSPQILHRAGLAPRLYAEFDN----GLVYQYVRGVTITPDS--IREPHIHPLVARNMARLHKVHSN  245 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~n----G~~e~fi~g~tL~~~~--l~~~~i~~~IA~~la~~H~~~~~  245 (317)
                      ..+..|++....|++++...+    +.|++||+|++|+...  ...+.+...+|+.|+++|.+..+
T Consensus        43 ~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~  108 (244)
T cd05150          43 ERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVA  108 (244)
T ss_pred             HHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcc
Confidence            445667777889999999874    7999999999998654  44557888999999999998653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.74  E-value=0.028  Score=52.62  Aligned_cols=81  Identities=17%  Similarity=0.251  Sum_probs=57.7

Q ss_pred             hcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCC
Q psy8745          17 ALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPID   96 (317)
Q Consensus        17 ~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d   96 (317)
                      ..|+ +++.+..   .+.+.|+.......+.|+||+.+|.++.. +| .+++|= -|-+++|-+|||..  |+-      
T Consensus       164 ~~f~-did~~~~---~v~elL~~hqpqPsLlHGDLW~gN~a~~~-~G-Pv~fDP-A~y~GDrE~Dlam~--elF------  228 (286)
T COG3001         164 LTFG-DIDAIVE---KIQELLADHQPQPSLLHGDLWSGNCAFGK-DG-PVIFDP-ACYWGDRECDLAML--ELF------  228 (286)
T ss_pred             CCcc-CHHHHHH---HHHHHHhcCCCCcceeecccccccccccC-CC-Ceeecc-ccccCCcccceehh--hhh------
Confidence            4677 7766554   55666777777789999999999999865 34 777775 35568999999974  221      


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhc
Q psy8745          97 HSRYPGPEFQLSWLRTYLEEYT  118 (317)
Q Consensus        97 ~~~yp~~e~~~~fi~~YL~~y~  118 (317)
                       ..||     .+|.+.|.+.+.
T Consensus       229 -ggfp-----~efy~gY~sv~P  244 (286)
T COG3001         229 -GGFP-----PEFYDGYQSVSP  244 (286)
T ss_pred             -cCCc-----HHHHHhhhccCC
Confidence             1233     457889988764

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=95.72  E-value=0.017  Score=50.97  Aligned_cols=30  Identities=30%  Similarity=0.378  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|+||++++ ++.+.||||..|+
T Consensus       144 ~gi~H~Dl~p~Nill~~-~~~~~liDfg~~~  173 (198)
T cd05144         144 HGIIHGDLSEFNILVDD-DEKIYIIDWPQMV  173 (198)
T ss_pred             CCCCcCCCCcccEEEcC-CCcEEEEECCccc
Confidence            57999999999999986 6789999998774

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=95.71  E-value=0.02  Score=52.80  Aligned_cols=28  Identities=32%  Similarity=0.364  Sum_probs=25.2

Q ss_pred             eeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      +||+|++|+||+++  +++++||||..|..
T Consensus       170 iiH~Dikp~NIli~--~~~i~LiDFg~a~~  197 (237)
T smart00090      170 LVHGDLSEYNILVH--DGKVVIIDVSQSVE  197 (237)
T ss_pred             EEeCCCChhhEEEE--CCCEEEEEChhhhc
Confidence            89999999999997  47899999988873

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.58  E-value=0.02  Score=51.33  Aligned_cols=29  Identities=38%  Similarity=0.428  Sum_probs=22.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..+.|+||.+.|||+++  +++++|||+-|-
T Consensus       126 ~givHGDLs~~NIlv~~--~~~~iIDf~qav  154 (188)
T PF01163_consen  126 AGIVHGDLSEYNILVDD--GKVYIIDFGQAV  154 (188)
T ss_dssp             TTEEESS-STTSEEEET--TCEEE--GTTEE
T ss_pred             cCceecCCChhhEEeec--ceEEEEecCcce
Confidence            58999999999999985  589999997554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0668|consensus

Probab=95.29  E-value=0.011  Score=55.18  Aligned_cols=41  Identities=20%  Similarity=0.263  Sum_probs=35.3

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhH
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI   82 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDi   82 (317)
                      ...++.|+|++|+|+|+|....++.||||-.|-+..|+-|.
T Consensus       149 HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY  189 (338)
T KOG0668|consen  149 HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY  189 (338)
T ss_pred             HhcCcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence            45789999999999999877788999999888877777654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.24  E-value=0.04  Score=48.23  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=57.2

Q ss_pred             cchhhhhcCC-CCceEEEecC-------ceEEEeecCccCCCCCC---CC----cccHHHHHHHHHhhcccCCCC-----
Q psy8745         187 SPQILHRAGL-APRLYAEFDN-------GLVYQYVRGVTITPDSI---RE----PHIHPLVARNMARLHKVHSNM-----  246 (317)
Q Consensus       187 ~~~~L~~~~~-gp~l~g~F~n-------G~~e~fi~g~tL~~~~l---~~----~~i~~~IA~~la~~H~~~~~~-----  246 (317)
                      .++.|+..|+ .|++++...+       ..+.+|++|.++....+   .+    ..+...||+.|+++|....+.     
T Consensus        48 ~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~  127 (223)
T cd05154          48 VLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGD  127 (223)
T ss_pred             HHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcc
Confidence            3456667677 8888888876       58999999999988664   22    256789999999999986531     


Q ss_pred             -C--CCcchHHHHHHHhhcccc
Q psy8745         247 -K--TPKLWSTGKHMLSLIPRT  265 (317)
Q Consensus       247 -~--~p~lw~~i~kwl~~~~~~  265 (317)
                       .  ...+...+.+|...+...
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~  149 (223)
T cd05154         128 LGRPGGYLERQVARWRRQYDAS  149 (223)
T ss_pred             cCCCCchHHHHHHHHHHHHHhh
Confidence             1  123677788887766543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=95.12  E-value=0.015  Score=52.51  Aligned_cols=28  Identities=32%  Similarity=0.465  Sum_probs=24.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYA   73 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya   73 (317)
                      ..++|+||.+.|||+.  +++++||||.-|
T Consensus       144 ~glVHGDLs~~NIL~~--~~~v~iIDF~qa  171 (197)
T cd05146         144 CNLVHADLSEYNMLWH--DGKVWFIDVSQS  171 (197)
T ss_pred             CCeecCCCCHHHEEEE--CCcEEEEECCCc
Confidence            4899999999999997  378999999743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=94.87  E-value=0.019  Score=53.30  Aligned_cols=38  Identities=21%  Similarity=0.172  Sum_probs=28.3

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC--chhhhH
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN--YQAFDI   82 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n--~~~fDi   82 (317)
                      ...++|+|++|+|||+++ .+ +.||||-.+...  ..+.|+
T Consensus       153 ~~gi~H~Dikp~Nili~~-~g-i~liDfg~~~~~~e~~a~d~  192 (232)
T PRK10359        153 QHGMVSGDPHKGNFIVSK-NG-LRIIDLSGKRCTAQRKAKDR  192 (232)
T ss_pred             HcCCccCCCChHHEEEeC-CC-EEEEECCCcccccchhhHHH
Confidence            458999999999999976 45 999998655543  334444

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=94.80  E-value=0.033  Score=46.73  Aligned_cols=57  Identities=19%  Similarity=0.166  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhh
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAF   80 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~f   80 (317)
                      .+.+...+..+.+.+.... ...++|+|++++||+++...+.+.++||+++......-
T Consensus        91 ~~~~~~~~~~l~~~l~~lh-~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~  147 (215)
T cd00180          91 EDEILRILLQILEGLEYLH-SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK  147 (215)
T ss_pred             HHHHHHHHHHHHHHHHHHH-hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence            4444444444444443222 23899999999999997534789999999998665543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=94.73  E-value=0.045  Score=50.65  Aligned_cols=30  Identities=23%  Similarity=0.335  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+-|+|++|+|+++.+  ++|.+||+.-..+
T Consensus       154 ~G~~HGD~hpgNFlv~~--~~i~iID~~~k~~  183 (229)
T PF06176_consen  154 HGFYHGDPHPGNFLVSN--NGIRIIDTQGKRM  183 (229)
T ss_pred             cCCccCCCCcCcEEEEC--CcEEEEECccccc
Confidence            58899999999999974  6799999977654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=94.66  E-value=0.046  Score=51.54  Aligned_cols=30  Identities=20%  Similarity=0.385  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||+++ ++.+.|+||..|.
T Consensus       115 ~~ivHrDikp~NIll~~-~~~~kL~Dfg~~~  144 (325)
T cd05594         115 KNVVYRDLKLENLMLDK-DGHIKITDFGLCK  144 (325)
T ss_pred             CCEEecCCCCCeEEECC-CCCEEEecCCCCe
Confidence            57899999999999986 6789999998765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]

Probab=94.55  E-value=0.14  Score=47.82  Aligned_cols=64  Identities=27%  Similarity=0.285  Sum_probs=46.7

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEE-EEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVT-FIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYL  114 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~-lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL  114 (317)
                      ...|+||+|----|+|.++  .+.. +||+.-+|.+++..||+........ |      .+.......|+..|.
T Consensus       183 edLVv~HGDACLPN~i~d~--~rf~GfIDlGrlGVaDRh~DLala~~s~~~-n------l~g~~~~~~fl~~Yg  247 (266)
T COG3231         183 EDLVVTHGDACLPNFILDG--WRFSGFIDLGRLGVADRHQDLALATWSLRF-N------LGGDVWDDPFLDAYG  247 (266)
T ss_pred             hhceeecCcccCcceEecC--CceEEeeecCcccchHHHHhHHHHHHHHHh-c------cCcchhhHHHHHHhC
Confidence            4689999999999999975  3555 9999999999999999976543221 1      234444455555555

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=94.53  E-value=0.025  Score=56.92  Aligned_cols=34  Identities=29%  Similarity=0.398  Sum_probs=29.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      ..++|+|++|+||++++ ++++++|||-.++.-++
T Consensus       276 ~g~~H~D~hPgNilv~~-~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 DGFFHADLHPGNIFVLK-DGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CCceeCCCCcccEEECC-CCcEEEEeCCCeeECCH
Confidence            46899999999999976 57899999999876554

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=94.32  E-value=0.051  Score=48.80  Aligned_cols=51  Identities=16%  Similarity=0.197  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...+...+..+...+.....+..++|+|++++||++++ .+.+.|+||..+.
T Consensus        99 ~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~  149 (265)
T cd06605          99 ERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS-RGQIKLCDFGVSG  149 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC-CCCEEEeecccch
Confidence            44444444444444433333468999999999999986 6789999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0583|consensus

Probab=94.20  E-value=0.025  Score=55.79  Aligned_cols=35  Identities=23%  Similarity=0.373  Sum_probs=30.5

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ...++|+||++.|||++++++++.++||.++...+
T Consensus       138 ~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen  138 SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP  172 (370)
T ss_pred             hCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence            45889999999999998744899999999998765

>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.11  E-value=0.46  Score=45.69  Aligned_cols=115  Identities=21%  Similarity=0.234  Sum_probs=67.9

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEee----ccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDY----EYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE  116 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDf----Eya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~  116 (317)
                      ...++=||+||+.+||.+-  ++++.|.|+    |--.+.+..+|+|-..-.      .++..  -.+.-..|++.|+..
T Consensus       206 ~g~IRecHGDLhl~ni~l~--dg~~~LFDCIEFNd~fr~iDv~~D~AFl~MD------Le~~g--r~dla~~~ln~Yl~~  275 (337)
T COG2187         206 EGFIRECHGDLHLRNICLW--DGEPALFDCIEFNDPFRFIDVLYDLAFLAMD------LEFRG--RKDLARRFLNTYLEE  275 (337)
T ss_pred             cCCceecccchhhcceeee--cCcceEEEEeecCCcchHHHHHHHHHHHHhh------HhhcC--ChHHHHHHHHHHHHH
Confidence            4678999999999999875  367888886    345566778888865432      12222  234556788888876


Q ss_pred             hcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCH-------HHHHHHHHHHHHHhHhhh
Q psy8745         117 YTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDF-------FQYASSTYQGYVLKRDKY  180 (317)
Q Consensus       117 y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy-------~~Ya~~R~~~y~~~k~el  180 (317)
                      -.  +....++-             .+|=+.-|.+.+++..--+|.       -.=|..+...|+.+....
T Consensus       276 tg--D~~gl~lL-------------pfyla~rA~VRakV~sf~ldd~~~~a~~k~~a~~~A~~y~~LA~~y  331 (337)
T COG2187         276 TG--DWDGLELL-------------PFYLAYRAYVRAKVTSFLLDDPNLTAAEKEEAAATARRYFKLARQY  331 (337)
T ss_pred             hC--CccHHHHh-------------HHHHHHHHHHHHheeEEeccCCCchhhhhHHHHHHhhHHHHHHHHH
Confidence            41  22222222             245566677777765433333       223444555565554443

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=94.09  E-value=0.026  Score=50.37  Aligned_cols=30  Identities=30%  Similarity=0.447  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       118 ~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~~  147 (260)
T PF00069_consen  118 GIVHRDIKPENILLDE-NGEVKLIDFGSSVK  147 (260)
T ss_dssp             TEEESSBSGGGEEEST-TSEEEESSGTTTEE
T ss_pred             cccccccccccccccc-cccccccccccccc
Confidence            7899999999999985 78899999999864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0983|consensus

Probab=94.04  E-value=0.06  Score=51.56  Aligned_cols=60  Identities=25%  Similarity=0.278  Sum_probs=40.4

Q ss_pred             chhhhhcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          12 SSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        12 ~~~~~~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      -++...++|  .-.|-.-.-.+.+.|.-.+....+.|+|++|.|||+|+ .|+|.|-||--+|
T Consensus       181 lkrik~piP--E~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe-~GniKlCDFGIsG  240 (391)
T KOG0983|consen  181 LKRIKGPIP--ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISG  240 (391)
T ss_pred             HHHhcCCch--HHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc-CCCEEeecccccc
Confidence            356667777  11222222233334444445678999999999999987 6899999997776

>KOG0984|consensus

Probab=93.77  E-value=0.044  Score=50.60  Aligned_cols=44  Identities=23%  Similarity=0.322  Sum_probs=34.0

Q ss_pred             HHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          31 QYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        31 ~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      -.+-..+.-.....-+.|+|++|+|||+|. .|+|.+-||--+|+
T Consensus       155 ~Svv~al~~L~~kL~vIHRDvKPsNiLIn~-~GqVKiCDFGIsG~  198 (282)
T KOG0984|consen  155 VSVVHALEFLHSKLSVIHRDVKPSNILINY-DGQVKICDFGISGY  198 (282)
T ss_pred             HHHHHHHHHHHHHhhhhhccCCcceEEEcc-CCcEEEccccccee
Confidence            333344444445677899999999999986 79999999988885

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=93.74  E-value=0.092  Score=46.04  Aligned_cols=53  Identities=19%  Similarity=0.221  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ...+..-+..+...+.... ...++|+|++|.||++++ ++.+.|+||..+....
T Consensus        97 ~~~~~~i~~~i~~~l~~lh-~~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~  149 (253)
T cd05122          97 ESQIAYVCKELLKGLEYLH-SNGIIHRDIKAANILLTS-DGEVKLIDFGLSAQLS  149 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhh-cCCEecCCCCHHHEEEcc-CCeEEEeecccccccc
Confidence            4444444444444443322 256899999999999986 6889999998876543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0667|consensus

Probab=93.60  E-value=0.073  Score=55.32  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=28.8

Q ss_pred             CeeeeecCCCCCCeeeeC-CCCeEEEEeeccccCCch
Q psy8745          43 PVVFCHNDLLLGNIIYDE-TEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~-~~~~l~lIDfEya~~n~~   78 (317)
                      ...+.|+||+|.|||+.+ +..+|.||||--|++-..
T Consensus       307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             hCCeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence            578999999999999853 345799999988775443

>KOG0658|consensus

Probab=93.56  E-value=0.042  Score=53.81  Aligned_cols=31  Identities=23%  Similarity=0.395  Sum_probs=27.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..+||+|++|.|+|+|.+.+.+.+=||--|.
T Consensus       144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK  174 (364)
T KOG0658|consen  144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAK  174 (364)
T ss_pred             cCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence            7899999999999999877889999997664

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=93.55  E-value=0.1  Score=47.07  Aligned_cols=32  Identities=38%  Similarity=0.504  Sum_probs=27.5

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|+++.||++++ ++.+.++||..+..
T Consensus       132 ~~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~  163 (269)
T cd08528         132 EKRIVHRDLTPNNIMLGE-DDKVTITDFGLAKQ  163 (269)
T ss_pred             CCceeecCCCHHHEEECC-CCcEEEecccceee
Confidence            346899999999999976 67899999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=93.51  E-value=0.1  Score=49.92  Aligned_cols=29  Identities=28%  Similarity=0.346  Sum_probs=25.3

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEY   72 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEy   72 (317)
                      ...+.|+|+.+-|||+++ +|++++|||-=
T Consensus       220 ~~GiVHGDlSefNIlV~~-dg~~~vIDwPQ  248 (304)
T COG0478         220 RRGIVHGDLSEFNILVTE-DGDIVVIDWPQ  248 (304)
T ss_pred             HcCccccCCchheEEEec-CCCEEEEeCcc
Confidence            468999999999999986 67899999943

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=93.43  E-value=0.11  Score=46.44  Aligned_cols=31  Identities=23%  Similarity=0.233  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.++||..+..
T Consensus       121 ~~i~H~di~p~nil~~~-~~~~~l~df~~~~~  151 (257)
T cd08223         121 KHILHRDLKTQNVFLTR-TNIIKVGDLGIARV  151 (257)
T ss_pred             CCeeccCCCchhEEEec-CCcEEEecccceEE
Confidence            46899999999999976 67899999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=93.36  E-value=0.082  Score=46.72  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=27.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+...
T Consensus       122 ~~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~~  153 (258)
T cd08215         122 RKILHRDIKPQNIFLTS-NGLVKLGDFGISKVL  153 (258)
T ss_pred             CCEecccCChHHeEEcC-CCcEEECCccceeec
Confidence            37899999999999986 688999999888653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=93.35  E-value=0.089  Score=49.62  Aligned_cols=31  Identities=23%  Similarity=0.353  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.|||+++ ++.+.|+||..+..
T Consensus       115 ~givH~Dlkp~NIll~~-~~~~kL~DfG~~~~  145 (325)
T cd05604         115 INIVYRDLKPENILLDS-QGHVVLTDFGLCKE  145 (325)
T ss_pred             CCeeecCCCHHHeEECC-CCCEEEeecCCccc
Confidence            46899999999999976 67899999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=93.32  E-value=0.094  Score=47.30  Aligned_cols=31  Identities=23%  Similarity=0.383  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++++||++++ ++.+.|+||..+..
T Consensus       121 ~~i~H~dl~~~Nill~~-~~~~~l~dfg~~~~  151 (260)
T cd05069         121 MNYIHRDLRAANILVGD-NLVCKIADFGLARL  151 (260)
T ss_pred             CCEeecccCcceEEEcC-CCeEEECCCccceE
Confidence            35899999999999976 67899999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0599|consensus

Probab=93.32  E-value=0.076  Score=50.85  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=35.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHH
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH   85 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~   85 (317)
                      .-+.|+||+|.|||.++ +.+|.+-||-+|+--.|+--|-+.
T Consensus       142 ~~IVHRDLKpENILldd-n~~i~isDFGFa~~l~~GekLrel  182 (411)
T KOG0599|consen  142 RNIVHRDLKPENILLDD-NMNIKISDFGFACQLEPGEKLREL  182 (411)
T ss_pred             hhhhhcccChhheeecc-ccceEEeccceeeccCCchhHHHh
Confidence            35789999999999987 678999999999999988777654

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=93.24  E-value=0.095  Score=47.20  Aligned_cols=32  Identities=25%  Similarity=0.372  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+...
T Consensus       122 ~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~~  153 (261)
T cd05068         122 QNYIHRDLAARNVLVGE-NNICKVADFGLARVI  153 (261)
T ss_pred             CCeeeccCCcceEEEcC-CCCEEECCcceEEEc
Confidence            46899999999999986 678999999887643

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=93.23  E-value=0.11  Score=49.17  Aligned_cols=29  Identities=21%  Similarity=0.469  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||++++ ++.+.|+||..+.
T Consensus       124 ~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~  152 (331)
T cd06649         124 QIMHRDVKPSNILVNS-RGEIKLCDFGVSG  152 (331)
T ss_pred             CEEcCCCChhhEEEcC-CCcEEEccCcccc
Confidence            5899999999999976 6789999998775

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0603|consensus

Probab=93.23  E-value=0.1  Score=54.23  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=31.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ..+.|+||+|+|||++++.+.|.++||-++....+-
T Consensus       434 ~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  434 QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            788999999999999534688999999988877666

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=93.18  E-value=0.13  Score=45.59  Aligned_cols=32  Identities=25%  Similarity=0.239  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++++||++++ .+.+.++||.++...
T Consensus       122 ~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~  153 (258)
T smart00219      122 KNFIHRDLAARNCLVGE-NLVVKISDFGLSRDL  153 (258)
T ss_pred             CCeeecccccceEEEcc-CCeEEEcccCCceec
Confidence            46799999999999986 578999999988654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=93.18  E-value=0.1  Score=46.43  Aligned_cols=33  Identities=27%  Similarity=0.352  Sum_probs=28.9

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ...++|+|+++.||++++ .+.+.++||..+..-
T Consensus       128 ~~~i~h~dl~p~nili~~-~~~~kl~d~g~~~~~  160 (265)
T cd08217         128 GNTVLHRDLKPANIFLDA-NNNVKLGDFGLAKIL  160 (265)
T ss_pred             cCcceecCCCHHHEEEec-CCCEEEecccccccc
Confidence            678899999999999986 688999999887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=93.16  E-value=0.1  Score=49.17  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||++.|||++. ++.+.|+||..+.
T Consensus       124 ~~ivHrDlkp~Nili~~-~~~~kl~DfG~~~  153 (332)
T cd05614         124 LGIVYRDIKLENILLDS-EGHVVLTDFGLSK  153 (332)
T ss_pred             CCcEecCCCHHHeEECC-CCCEEEeeCcCCc
Confidence            45899999999999976 6789999998765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=93.16  E-value=0.072  Score=50.38  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.|+||..+..
T Consensus       120 ~giiH~Dlkp~NIll~~-~~~~kL~Dfg~~~~  150 (350)
T cd05573         120 LGFIHRDIKPDNILIDA-DGHIKLADFGLCKK  150 (350)
T ss_pred             CCeeccCCCHHHeEECC-CCCEEeecCCCCcc
Confidence            57899999999999986 67899999988764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=93.12  E-value=0.1  Score=47.67  Aligned_cols=30  Identities=20%  Similarity=0.396  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. ++.+.++||..+.
T Consensus       122 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~  151 (286)
T cd06622         122 HNIIHRDVKPTNVLVNG-NGQVKLCDFGVSG  151 (286)
T ss_pred             CCEeeCCCCHHHEEECC-CCCEEEeecCCcc
Confidence            46899999999999986 6789999998875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0594|consensus

Probab=93.12  E-value=0.055  Score=52.47  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=28.0

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ....+.|+||+|.|||+++ .|.+.++||--|.
T Consensus       137 H~~~IlHRDLKPQNlLi~~-~G~lKlaDFGlAr  168 (323)
T KOG0594|consen  137 HSHGILHRDLKPQNLLISS-SGVLKLADFGLAR  168 (323)
T ss_pred             HhCCeecccCCcceEEECC-CCcEeeeccchHH
Confidence            4467899999999999987 7899999997776

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=93.09  E-value=0.081  Score=48.29  Aligned_cols=31  Identities=26%  Similarity=0.402  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||.++..
T Consensus       127 ~~ivH~dikp~Nili~~-~~~~kl~dfg~~~~  157 (288)
T cd07863         127 NCIVHRDLKPENILVTS-GGQVKLADFGLARI  157 (288)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEECccCcccc
Confidence            35899999999999976 67899999987753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=93.06  E-value=0.099  Score=49.33  Aligned_cols=31  Identities=19%  Similarity=0.305  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.|+||..+..
T Consensus       115 ~~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~  145 (330)
T cd05586         115 YDIVYRDLKPENILLDA-TGHIALCDFGLSKA  145 (330)
T ss_pred             CCeEeccCCHHHeEECC-CCCEEEecCCcCcC
Confidence            35899999999999976 67899999998764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PRK09188 serine/threonine protein kinase; Provisional

Probab=93.03  E-value=0.066  Score=52.83  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=29.2

Q ss_pred             eeeeecCC-CCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          44 VVFCHNDL-LLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        44 ~v~CHnDl-~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ..++|+|+ +|+|||++. ++.++||||..|..-.+.
T Consensus       130 ~gIiHrDL~KP~NILv~~-~~~ikLiDFGlA~~~~~~  165 (365)
T PRK09188        130 AGITHNDLAKPQNWLMGP-DGEAAVIDFQLASVFRRR  165 (365)
T ss_pred             CCCeeCCCCCcceEEEcC-CCCEEEEECccceecccC
Confidence            57899999 899999975 578999999998865443

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=93.01  E-value=0.11  Score=48.64  Aligned_cols=31  Identities=19%  Similarity=0.306  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. .+.+.++||..+..
T Consensus       112 ~~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~  142 (312)
T cd05585         112 FNVIYRDLKPENILLDY-QGHIALCDFGLCKL  142 (312)
T ss_pred             CCeEeCCCCHHHeEECC-CCcEEEEECccccc
Confidence            45899999999999976 67899999998764

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=92.98  E-value=0.096  Score=47.89  Aligned_cols=30  Identities=23%  Similarity=0.516  Sum_probs=25.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. .+.+.++||..+.
T Consensus       127 ~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~  156 (288)
T cd06616         127 LKIIHRDVKPSNILLDR-NGNIKLCDFGISG  156 (288)
T ss_pred             CCeeccCCCHHHEEEcc-CCcEEEeecchhH
Confidence            46899999999999976 5789999997654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=92.94  E-value=0.12  Score=45.78  Aligned_cols=33  Identities=27%  Similarity=0.353  Sum_probs=28.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ..++|+|+.|.||++++ ++.+.++||..+....
T Consensus       124 ~~i~H~di~p~nili~~-~~~~~l~dfg~~~~~~  156 (262)
T cd00192         124 KKFVHRDLAARNCLVGE-DLVVKISDFGLSRDVY  156 (262)
T ss_pred             CCcccCccCcceEEECC-CCcEEEcccccccccc
Confidence            56899999999999986 5889999998887544

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=92.93  E-value=0.11  Score=48.71  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.|+||..+..
T Consensus       115 ~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~  145 (321)
T cd05603         115 LNIIYRDLKPENILLDS-QGHVVLTDFGLCKE  145 (321)
T ss_pred             CCeEeccCCHHHeEECC-CCCEEEccCCCCcc
Confidence            46899999999999986 67899999988763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=92.89  E-value=0.13  Score=46.24  Aligned_cols=31  Identities=23%  Similarity=0.380  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||++++ ++.+.++||.++..
T Consensus       121 ~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~  151 (256)
T cd05082         121 NNFVHRDLAARNVLVSE-DNVAKVSDFGLTKE  151 (256)
T ss_pred             CCEeccccchheEEEcC-CCcEEecCCcccee
Confidence            46899999999999976 67899999987753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=92.85  E-value=0.13  Score=48.81  Aligned_cols=29  Identities=21%  Similarity=0.466  Sum_probs=25.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.||++++ .+.+.|+||..+.
T Consensus       124 ~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~  152 (333)
T cd06650         124 KIMHRDVKPSNILVNS-RGEIKLCDFGVSG  152 (333)
T ss_pred             CEEecCCChhhEEEcC-CCCEEEeeCCcch
Confidence            5899999999999976 5789999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=92.84  E-value=0.12  Score=48.68  Aligned_cols=31  Identities=19%  Similarity=0.363  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.|+||..|..
T Consensus       114 ~~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~  144 (323)
T cd05571         114 CDVVYRDLKLENLMLDK-DGHIKITDFGLCKE  144 (323)
T ss_pred             CCeEeCCCCHHHEEECC-CCCEEEeeCCCCcc
Confidence            46899999999999976 67899999987753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA02882 putative serine/threonine kinase; Provisional

Probab=92.83  E-value=0.064  Score=49.82  Aligned_cols=30  Identities=30%  Similarity=0.412  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++. .+.+.|+||..|.
T Consensus       145 ~~iiHrDiKp~Nill~~-~~~~~l~DFGla~  174 (294)
T PHA02882        145 HGISHGDIKPENIMVDG-NNRGYIIDYGIAS  174 (294)
T ss_pred             CCeecCCCCHHHEEEcC-CCcEEEEEcCCce
Confidence            46899999999999976 6789999998775

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=92.80  E-value=0.055  Score=51.87  Aligned_cols=30  Identities=23%  Similarity=0.468  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. ++.+.|+||..|.
T Consensus       120 ~givHrDLkp~NIli~~-~~~vkL~DfG~~~  149 (360)
T cd05627         120 LGFIHRDIKPDNLLLDA-KGHVKLSDFGLCT  149 (360)
T ss_pred             CCeEccCCCHHHEEECC-CCCEEEeeccCCc
Confidence            46899999999999976 6889999998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=92.77  E-value=0.12  Score=49.04  Aligned_cols=31  Identities=23%  Similarity=0.329  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+..
T Consensus       137 ~~ivH~dlkp~NIll~~-~~~~kl~Dfg~~~~  167 (329)
T PTZ00263        137 KDIIYRDLKPENLLLDN-KGHVKVTDFGFAKK  167 (329)
T ss_pred             CCeeecCCCHHHEEECC-CCCEEEeeccCceE
Confidence            45899999999999986 67899999988763

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=92.74  E-value=0.058  Score=50.82  Aligned_cols=30  Identities=20%  Similarity=0.458  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.||+++. .+.+.|+||..|.
T Consensus       121 ~~i~H~Dlkp~NIll~~-~~~~kL~Dfg~a~  150 (330)
T cd05601         121 MGYVHRDIKPENVLIDR-TGHIKLADFGSAA  150 (330)
T ss_pred             CCeEcccCchHheEECC-CCCEEeccCCCCe
Confidence            46899999999999986 6889999998775

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PRK10345 hypothetical protein; Provisional

Probab=92.71  E-value=0.23  Score=45.12  Aligned_cols=45  Identities=16%  Similarity=0.045  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeC---CCCeEEEEeecccc
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAG   74 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~   74 (317)
                      +.+.+..+.+.+..    ..++|+|++|.|||++.   .+..++|||+=.+.
T Consensus       110 ~~~~L~~l~~yLh~----~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        110 LRQLLKKLKRYLLD----NRIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             HHHHHHHHHHHHHH----CCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            44444444444433    45789999999999963   23479999964444

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=92.69  E-value=0.11  Score=49.00  Aligned_cols=30  Identities=20%  Similarity=0.368  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus       115 ~giiHrDlkp~Nili~~-~~~~kl~DfG~a~  144 (325)
T cd05602         115 LNIVYRDLKPENILLDS-QGHIVLTDFGLCK  144 (325)
T ss_pred             CCeEecCCCHHHeEECC-CCCEEEccCCCCc
Confidence            46899999999999976 6789999998775

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=92.68  E-value=0.059  Score=52.34  Aligned_cols=31  Identities=16%  Similarity=0.317  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ .+.+.|+||..|..
T Consensus       161 ~~IvHrDLKp~NILl~~-~~~~kL~DFG~a~~  191 (370)
T cd05621         161 MGLIHRDVKPDNMLLDK-HGHLKLADFGTCMK  191 (370)
T ss_pred             CCeEecCCCHHHEEECC-CCCEEEEeccccee
Confidence            46899999999999986 68899999998763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=92.67  E-value=0.14  Score=46.57  Aligned_cols=31  Identities=19%  Similarity=0.453  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||+++. .+.+.++||..+..
T Consensus       123 ~~i~h~dlkp~nil~~~-~~~~kl~dfg~~~~  153 (283)
T cd06617         123 LSVIHRDVKPSNVLINR-NGQVKLCDFGISGY  153 (283)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence            36899999999999976 67899999987763

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=92.64  E-value=0.13  Score=48.42  Aligned_cols=30  Identities=27%  Similarity=0.352  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. ++.+.|+||..|.
T Consensus       115 ~~ivHrDikp~Nill~~-~~~~kL~Dfg~~~  144 (321)
T cd05591         115 HGVIYRDLKLDNILLDA-EGHCKLADFGMCK  144 (321)
T ss_pred             CCeeccCCCHHHeEECC-CCCEEEeecccce
Confidence            35899999999999986 6789999998765

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=92.59  E-value=0.064  Score=48.14  Aligned_cols=32  Identities=28%  Similarity=0.393  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|+||+++. ++.+.|+||..+...
T Consensus       119 ~~~~H~dl~p~nili~~-~~~~kl~Dfg~~~~~  150 (254)
T cd05083         119 KKLVHRDLAARNILVSE-DGVAKVSDFGLARVG  150 (254)
T ss_pred             CCeeccccCcceEEEcC-CCcEEECCCccceec
Confidence            46899999999999976 578999999987654

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=92.53  E-value=0.064  Score=51.57  Aligned_cols=31  Identities=23%  Similarity=0.419  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. .+.+.|+||..|..
T Consensus       120 ~givHrDlKp~NILi~~-~~~vkL~DFGla~~  150 (363)
T cd05628         120 LGFIHRDIKPDNLLLDS-KGHVKLSDFGLCTG  150 (363)
T ss_pred             CCeEecCCCHHHeEECC-CCCEEEeeccCccc
Confidence            46899999999999986 67899999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=92.53  E-value=0.12  Score=48.98  Aligned_cols=30  Identities=17%  Similarity=0.398  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. .+.+.|+||..|.
T Consensus       121 ~~iiHrDlkp~Nill~~-~~~~kl~DfG~a~  150 (331)
T cd05624         121 LHYVHRDIKPDNVLLDM-NGHIRLADFGSCL  150 (331)
T ss_pred             CCeeeccCchHHEEEcC-CCCEEEEecccee
Confidence            46899999999999976 6789999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=92.51  E-value=0.13  Score=48.45  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus       119 ~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~  148 (323)
T cd05584         119 QGIIYRDLKPENILLDA-QGHVKLTDFGLCK  148 (323)
T ss_pred             CCeecCCCCHHHeEECC-CCCEEEeeCcCCe
Confidence            45899999999999976 6789999998765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=92.49  E-value=0.12  Score=46.42  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++++||++++ ++.+.++||..+..
T Consensus       121 ~~i~H~di~p~Nili~~-~~~~~l~dfg~~~~  151 (260)
T cd05070         121 MNYIHRDLRSANILVGD-GLVCKIADFGLARL  151 (260)
T ss_pred             CCcccCCCccceEEEeC-CceEEeCCceeeee
Confidence            35899999999999986 57899999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=92.49  E-value=0.14  Score=48.24  Aligned_cols=30  Identities=23%  Similarity=0.359  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus       115 ~givH~dikp~NIll~~-~~~~kl~Dfg~~~  144 (323)
T cd05575         115 LNIIYRDLKPENILLDS-QGHVVLTDFGLCK  144 (323)
T ss_pred             CCeEeCCCCHHHeEECC-CCcEEEeccCCCc
Confidence            46899999999999976 6789999998765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PTZ00036 glycogen synthase kinase; Provisional

Probab=92.46  E-value=0.15  Score=50.99  Aligned_cols=31  Identities=26%  Similarity=0.490  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..+||+||+|.|||++.+.+.+.|+||..|.
T Consensus       189 ~~IiHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        189 KFICHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             CCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence            4699999999999998644569999998875

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=92.44  E-value=0.12  Score=47.74  Aligned_cols=29  Identities=28%  Similarity=0.476  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .+||+|+.+.||++++ ++.+.|+||..+.
T Consensus       135 ~i~H~dl~p~nill~~-~~~~kL~dfg~~~  163 (296)
T cd06618         135 GVIHRDVKPSNILLDA-SGNVKLCDFGISG  163 (296)
T ss_pred             CEecCCCcHHHEEEcC-CCCEEECccccch
Confidence            5899999999999976 6789999998764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=92.43  E-value=0.14  Score=48.96  Aligned_cols=31  Identities=16%  Similarity=0.367  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.|||+++ ++.+.|+||..+..
T Consensus       187 ~~ivHrDlkp~NIll~~-~~~~kL~DfG~~~~  217 (353)
T PLN00034        187 RHIVHRDIKPSNLLINS-AKNVKIADFGVSRI  217 (353)
T ss_pred             CCEeecCCCHHHEEEcC-CCCEEEccccccee
Confidence            46899999999999986 67899999987653

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=92.43  E-value=0.16  Score=45.93  Aligned_cols=31  Identities=26%  Similarity=0.373  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.++||.++..
T Consensus       123 ~~i~H~dlkp~nil~~~-~~~~kl~df~~~~~  153 (263)
T cd05052         123 KNFIHRDLAARNCLVGE-NHLVKVADFGLSRL  153 (263)
T ss_pred             CCEeecccCcceEEEcC-CCcEEeCCCccccc
Confidence            46899999999999976 67899999998753

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=92.41  E-value=0.15  Score=48.14  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus       120 ~~ivH~dlkp~Nill~~-~~~~kL~Dfg~~~  149 (324)
T cd05587         120 KGIIYRDLKLDNVMLDA-EGHIKIADFGMCK  149 (324)
T ss_pred             CCeEecCCCHHHeEEcC-CCCEEEeecCcce
Confidence            46899999999999986 6789999998765

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=92.41  E-value=0.14  Score=49.33  Aligned_cols=30  Identities=23%  Similarity=0.502  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. ++.+.|+||..|.
T Consensus       120 ~~ivHrDlkp~Nill~~-~~~ikL~DFG~a~  149 (376)
T cd05598         120 MGFIHRDIKPDNILIDR-DGHIKLTDFGLCT  149 (376)
T ss_pred             CCeEeCCCCHHHEEECC-CCCEEEEeCCCCc
Confidence            45899999999999986 6789999998874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=92.39  E-value=0.15  Score=48.16  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.|+||..+..
T Consensus       115 ~~ivH~dlkp~NIli~~-~~~~kL~DfG~~~~  145 (320)
T cd05590         115 KGIIYRDLKLDNVLLDH-EGHCKLADFGMCKE  145 (320)
T ss_pred             CCeEeCCCCHHHeEECC-CCcEEEeeCCCCee
Confidence            46899999999999976 67899999987653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=92.26  E-value=0.17  Score=47.03  Aligned_cols=33  Identities=18%  Similarity=0.288  Sum_probs=28.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ..++|+|+++.||+++. ++.+.|+||+.+....
T Consensus       122 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~  154 (316)
T cd05574         122 LGIVYRDLKPENILLHE-SGHIMLSDFDLSKQSD  154 (316)
T ss_pred             CCeeccCCChHHeEEcC-CCCEEEeecchhhccc
Confidence            35899999999999986 5789999999887543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=92.23  E-value=0.19  Score=50.69  Aligned_cols=31  Identities=19%  Similarity=0.268  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ .+.+.|+||..|..
T Consensus       188 ~~ivHrDlkp~NIll~~-~~~~kL~DFgla~~  218 (478)
T PTZ00267        188 RKMMHRDLKSANIFLMP-TGIIKLGDFGFSKQ  218 (478)
T ss_pred             CCEEECCcCHHhEEECC-CCcEEEEeCcCcee
Confidence            46899999999999986 67899999998763

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=92.23  E-value=0.1  Score=48.20  Aligned_cols=30  Identities=23%  Similarity=0.400  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus       122 ~~ivH~dlkp~Nil~~~-~~~~kl~DfG~~~  151 (288)
T cd07871         122 RKILHRDLKPQNLLINE-KGELKLADFGLAR  151 (288)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEECcCccee
Confidence            46899999999999976 5789999998775

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=92.23  E-value=0.098  Score=48.80  Aligned_cols=34  Identities=18%  Similarity=0.294  Sum_probs=28.8

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      .+.+|++|++++.   .++.....+|+.||+||....
T Consensus        91 ~l~~~i~G~~~~~---~~~~~~~~lg~~La~lH~~~~  124 (296)
T cd05153          91 ALVEFLAGEHLTR---PTAAHCRQIGEALARLHLAAQ  124 (296)
T ss_pred             EEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHhc
Confidence            5789999998876   467889999999999998753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=92.20  E-value=0.14  Score=46.83  Aligned_cols=31  Identities=23%  Similarity=0.379  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       129 ~~iiH~dlkp~Nil~~~-~~~~kl~Dfg~~~~  159 (290)
T cd07862         129 HRVVHRDLKPQNILVTS-SGQIKLADFGLARI  159 (290)
T ss_pred             CCeeeCCCCHHHEEEcC-CCCEEEccccceEe
Confidence            45899999999999976 67899999988753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=92.20  E-value=0.15  Score=48.90  Aligned_cols=31  Identities=23%  Similarity=0.431  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.|+||..+..
T Consensus       150 ~~ivHrDLkp~NILl~~-~~~ikL~DFG~a~~  180 (340)
T PTZ00426        150 LNIVYRDLKPENLLLDK-DGFIKMTDFGFAKV  180 (340)
T ss_pred             CCeEccCCCHHHEEECC-CCCEEEecCCCCee
Confidence            46899999999999976 67899999988764

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=92.14  E-value=0.14  Score=48.27  Aligned_cols=32  Identities=19%  Similarity=0.338  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+||+|.||++++ .+.+.|+||..+...
T Consensus       120 ~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~a~~~  151 (333)
T cd05600         120 LGYIHRDLKPENFLIDA-SGHIKLTDFGLSKGI  151 (333)
T ss_pred             CCccccCCCHHHEEECC-CCCEEEEeCcCCccc
Confidence            35899999999999976 678999999888643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=92.13  E-value=0.17  Score=47.90  Aligned_cols=30  Identities=17%  Similarity=0.419  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||++.|||++. ++.+.|+||..+.
T Consensus       121 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~  150 (331)
T cd05597         121 LGYVHRDIKPDNVLLDK-NGHIRLADFGSCL  150 (331)
T ss_pred             CCeEECCCCHHHEEECC-CCCEEEEECCcee
Confidence            45789999999999976 6789999998764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=92.11  E-value=0.16  Score=48.15  Aligned_cols=31  Identities=19%  Similarity=0.350  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||+++ ++.+.|+||..+..
T Consensus       114 ~~ivHrDikp~NIll~~-~~~~kL~DfG~~~~  144 (328)
T cd05593         114 GKIVYRDLKLENLMLDK-DGHIKITDFGLCKE  144 (328)
T ss_pred             CCeEecccCHHHeEECC-CCcEEEecCcCCcc
Confidence            46899999999999986 67899999988763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=92.10  E-value=0.14  Score=48.40  Aligned_cols=30  Identities=17%  Similarity=0.360  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus       114 ~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~  143 (323)
T cd05595         114 RDVVYRDIKLENLMLDK-DGHIKITDFGLCK  143 (323)
T ss_pred             CCeEecCCCHHHEEEcC-CCCEEecccHHhc
Confidence            46899999999999986 6789999998765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=92.10  E-value=0.14  Score=47.02  Aligned_cols=31  Identities=23%  Similarity=0.317  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||.++..
T Consensus       151 ~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~~~~  181 (293)
T cd05053         151 KKCIHRDLAARNVLVTE-DHVMKIADFGLARD  181 (293)
T ss_pred             CCccccccceeeEEEcC-CCeEEeCccccccc
Confidence            46899999999999976 67899999988763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=92.09  E-value=0.15  Score=47.94  Aligned_cols=30  Identities=23%  Similarity=0.378  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus       120 ~~ivHrDlkp~Nill~~-~~~~kL~DfG~~~  149 (323)
T cd05616         120 KGIIYRDLKLDNVMLDS-EGHIKIADFGMCK  149 (323)
T ss_pred             CCEEecCCCHHHeEECC-CCcEEEccCCCce
Confidence            46899999999999986 6789999998775

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=92.08  E-value=0.17  Score=48.73  Aligned_cols=30  Identities=23%  Similarity=0.459  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. ++.+.++||..+.
T Consensus       120 ~givHrDlkp~NIll~~-~~~~kl~DfGla~  149 (377)
T cd05629         120 LGFIHRDIKPDNILIDR-GGHIKLSDFGLST  149 (377)
T ss_pred             CCeeccCCCHHHEEECC-CCCEEEeeccccc
Confidence            46999999999999976 6789999998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=92.04  E-value=0.17  Score=48.97  Aligned_cols=30  Identities=23%  Similarity=0.502  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. ++.+.|+||..|.
T Consensus       120 ~~ivHrDlKp~NILl~~-~g~~kL~DFGla~  149 (382)
T cd05625         120 MGFIHRDIKPDNILIDR-DGHIKLTDFGLCT  149 (382)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEeECCCCc
Confidence            35899999999999976 6889999998864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=92.04  E-value=0.087  Score=54.75  Aligned_cols=31  Identities=29%  Similarity=0.380  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++++.+.+.|+||..|.
T Consensus       274 ~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~  304 (566)
T PLN03225        274 TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAA  304 (566)
T ss_pred             CCEEeCcCCHHHEEEeCCCCcEEEEeCCCcc
Confidence            4699999999999998645789999999885

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=92.03  E-value=0.15  Score=48.02  Aligned_cols=30  Identities=20%  Similarity=0.370  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus       115 ~~ivHrDlkp~Nil~~~-~~~~kl~Dfg~~~  144 (316)
T cd05620         115 KGIIYRDLKLDNVMLDR-DGHIKIADFGMCK  144 (316)
T ss_pred             CCeEecCCCHHHeEECC-CCCEEeCccCCCe
Confidence            46899999999999986 6789999998775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG4250|consensus

Probab=92.02  E-value=0.18  Score=53.32  Aligned_cols=32  Identities=25%  Similarity=0.337  Sum_probs=24.5

Q ss_pred             CeeeeecCCCCCCeeeeC-C-CCeEE-EEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDE-T-EDKVT-FIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~-~-~~~l~-lIDfEya~   74 (317)
                      +..+||+||+|+||+.-. . +..|+ |+||-+|.
T Consensus       138 En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar  172 (732)
T KOG4250|consen  138 ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR  172 (732)
T ss_pred             HcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence            568999999999998742 2 23454 99998875

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=92.00  E-value=0.18  Score=47.72  Aligned_cols=30  Identities=20%  Similarity=0.406  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.||+++. ++.+.|+||..+.
T Consensus       121 ~~iiHrDlkp~Nili~~-~~~~kL~DfG~a~  150 (332)
T cd05623         121 LHYVHRDIKPDNILMDM-NGHIRLADFGSCL  150 (332)
T ss_pred             CCeEecCCCHHHEEECC-CCCEEEeecchhe
Confidence            45899999999999976 6789999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=91.98  E-value=0.17  Score=46.90  Aligned_cols=29  Identities=24%  Similarity=0.389  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||++++ .+.+.|+||.++.
T Consensus       158 ~ivH~dlkp~Nill~~-~~~~kl~DfG~~~  186 (304)
T cd05096         158 NFVHRDLATRNCLVGE-NLTIKIADFGMSR  186 (304)
T ss_pred             CccccCcchhheEEcC-CccEEECCCccce
Confidence            4899999999999986 6789999998775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=91.98  E-value=0.16  Score=46.01  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||.++..
T Consensus       121 ~~i~H~dl~p~Nill~~-~~~~~L~dfg~~~~  151 (262)
T cd05071         121 MNYVHRDLRAANILVGE-NLVCKVADFGLARL  151 (262)
T ss_pred             CCccccccCcccEEEcC-CCcEEeccCCceee
Confidence            45799999999999976 67899999998863

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=91.96  E-value=0.17  Score=45.19  Aligned_cols=52  Identities=17%  Similarity=0.197  Sum_probs=35.1

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ......-+..+.+.+........++|+|+.+.||++++ ++.+.|+||..+..
T Consensus        98 ~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~-~~~~~l~df~~~~~  149 (264)
T cd06623          98 EPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS-KGEVKIADFGISKV  149 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC-CCCEEEccCcccee
Confidence            33333433444444433333278899999999999976 68899999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=91.94  E-value=0.15  Score=47.71  Aligned_cols=30  Identities=27%  Similarity=0.359  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++. ++.+.|+||..+.
T Consensus       122 ~~ivH~dlkp~NIll~~-~~~~kL~Dfg~~~  151 (338)
T cd07859         122 ANVFHRDLKPKNILANA-DCKLKICDFGLAR  151 (338)
T ss_pred             CCeecCCCCHHHeEECC-CCcEEEccCcccc
Confidence            35899999999999976 6789999998775

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=91.94  E-value=0.091  Score=47.10  Aligned_cols=33  Identities=24%  Similarity=0.310  Sum_probs=28.3

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ...++|+|++|.||+++. ++.+.++||.++...
T Consensus       120 ~~~i~H~di~p~Nili~~-~~~~~l~d~g~~~~~  152 (256)
T cd05039         120 EKNFVHRDLAARNVLVSE-DLVAKVSDFGLAKEA  152 (256)
T ss_pred             hCCccchhcccceEEEeC-CCCEEEccccccccc
Confidence            346899999999999986 678999999988765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=91.90  E-value=0.18  Score=44.59  Aligned_cols=52  Identities=17%  Similarity=0.116  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .+.+..-+..+...+... ....++|+|+++.||++++ .+.+.++||.++..-
T Consensus        98 ~~~~~~~~~~i~~~l~~l-H~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~  149 (254)
T cd06627          98 ESLVAVYVYQVLQGLAYL-HEQGVIHRDIKAANILTTK-DGVVKLADFGVATKL  149 (254)
T ss_pred             HHHHHHHHHHHHHHHHHH-hhCCcccCCCCHHHEEECC-CCCEEEeccccceec
Confidence            444444444443333221 2346799999999999986 678999999988743

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=91.90  E-value=0.087  Score=48.78  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.||+++. ++.+.++||..+.
T Consensus       120 ~~i~H~dlkp~NIli~~-~~~~kl~Dfg~~~  149 (291)
T cd05612         120 KEIVYRDLKPENILLDK-EGHIKLTDFGFAK  149 (291)
T ss_pred             CCeeecCCCHHHeEECC-CCCEEEEecCcch
Confidence            46899999999999976 6789999998765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=91.85  E-value=0.21  Score=46.65  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.||++++ ++.+.|+||..+..
T Consensus       128 ~~iiH~dlkp~Nill~~-~~~~kl~DfG~a~~  158 (316)
T cd05108         128 RRLVHRDLAARNVLVKT-PQHVKITDFGLAKL  158 (316)
T ss_pred             cCeeccccchhheEecC-CCcEEEcccccccc
Confidence            35899999999999976 67899999998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0608|consensus

Probab=91.78  E-value=0.19  Score=53.06  Aligned_cols=32  Identities=22%  Similarity=0.462  Sum_probs=28.6

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ....|.|+|++|+|||+|- +|.|.|-||-.|.
T Consensus       746 HkmGFIHRDiKPDNILIDr-dGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  746 HKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCT  777 (1034)
T ss_pred             HhccceecccCccceEEcc-CCceeeeeccccc
Confidence            4579999999999999986 6899999998876

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=91.78  E-value=0.1  Score=54.07  Aligned_cols=36  Identities=22%  Similarity=0.324  Sum_probs=29.6

Q ss_pred             CeeeeecCCCCCCeeeeCCCC----eEEEEeeccccCCchh
Q psy8745          43 PVVFCHNDLLLGNIIYDETED----KVTFIDYEYAGVNYQA   79 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~----~l~lIDfEya~~n~~~   79 (317)
                      ...|.|.|++||||+++. ++    ++.+|||-.++.-++.
T Consensus       278 ~~GffHaDpHPGNIlv~~-~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSY-DPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             hCCeeeCCCChHHeEEec-CCCCCCeEEEEecceEEECCHH
Confidence            357999999999999976 34    8999999988865443

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=91.77  E-value=0.19  Score=47.07  Aligned_cols=31  Identities=26%  Similarity=0.377  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.||++++ ++.+.|+||..+..
T Consensus       117 ~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~  147 (318)
T cd05582         117 LGIIYRDLKPENILLDE-EGHIKLTDFGLSKE  147 (318)
T ss_pred             CCEecCCCCHHHeEECC-CCcEEEeeccCCcc
Confidence            46899999999999976 67899999987653

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=91.72  E-value=0.18  Score=45.63  Aligned_cols=33  Identities=33%  Similarity=0.415  Sum_probs=28.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ..++|+|+.+.||+++. ++.+.+.||..+..-.
T Consensus       128 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~  160 (284)
T cd05038         128 QRYIHRDLAARNILVES-EDLVKISDFGLAKVLP  160 (284)
T ss_pred             CCeecCCCCHHhEEEcC-CCCEEEcccccccccc
Confidence            46899999999999986 5789999998887644

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PHA03212 serine/threonine kinase US3; Provisional

Probab=91.72  E-value=0.19  Score=49.31  Aligned_cols=30  Identities=23%  Similarity=0.266  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++. .+.+.|+||..|.
T Consensus       201 ~~IvHrDiKP~NIll~~-~~~vkL~DFG~a~  230 (391)
T PHA03212        201 NRIIHRDIKAENIFINH-PGDVCLGDFGAAC  230 (391)
T ss_pred             CCcccCCCChHhEEEcC-CCCEEEEeCCccc
Confidence            35899999999999976 6789999998775

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=91.71  E-value=0.2  Score=47.56  Aligned_cols=31  Identities=26%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.|+||..+..
T Consensus       115 ~~ivH~Dikp~Nili~~-~~~~kL~DfG~~~~  145 (329)
T cd05618         115 RGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKE  145 (329)
T ss_pred             CCeeeCCCCHHHEEECC-CCCEEEeeCCcccc
Confidence            36899999999999976 67899999987753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=91.71  E-value=0.073  Score=49.41  Aligned_cols=30  Identities=20%  Similarity=0.363  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. ++.+.|+||..+.
T Consensus       122 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~  151 (303)
T cd07869         122 RYILHRDLKPQNLLISD-TGELKLADFGLAR  151 (303)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEECCCCcce
Confidence            35899999999999976 6789999998875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=91.69  E-value=0.18  Score=47.31  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=28.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      ..++|+|+++.||++++ ++.+.|+||..+.....
T Consensus       122 ~gi~H~dlkp~nili~~-~~~~~L~dfg~~~~~~~  155 (330)
T cd07834         122 ANVIHRDLKPSNILVNS-NCDLKICDFGLARGVDP  155 (330)
T ss_pred             CCeecCCCCHHHEEEcC-CCCEEEcccCceEeecc
Confidence            35899999999999986 58899999998885433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=91.68  E-value=0.19  Score=47.60  Aligned_cols=30  Identities=23%  Similarity=0.409  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus       115 ~~ivHrDlkp~Nili~~-~~~~kl~Dfg~~~  144 (327)
T cd05617         115 RGIIYRDLKLDNVLLDA-DGHIKLTDYGMCK  144 (327)
T ss_pred             CCeeccCCCHHHEEEeC-CCCEEEeccccce
Confidence            46899999999999986 6789999998765

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=91.66  E-value=0.096  Score=46.81  Aligned_cols=31  Identities=19%  Similarity=0.258  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.++||.++..
T Consensus       113 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~  143 (252)
T cd05084         113 KHCIHRDLAARNCLVTE-KNVLKISDFGMSRE  143 (252)
T ss_pred             CCccccccchheEEEcC-CCcEEECccccCcc
Confidence            35799999999999976 57899999998763

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=91.64  E-value=0.24  Score=44.48  Aligned_cols=31  Identities=19%  Similarity=0.359  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||+++. ++.+.|+||..+..
T Consensus       114 ~~i~H~di~p~nili~~-~~~~kl~df~~~~~  144 (257)
T cd05060         114 KHFVHRDLAARNVLLVN-RHQAKISDFGMSRA  144 (257)
T ss_pred             cCeeccCcccceEEEcC-CCcEEeccccccce
Confidence            35899999999999976 67899999988764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=91.63  E-value=0.078  Score=49.37  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.|+||..+..
T Consensus       123 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~  153 (309)
T cd07872         123 RKVLHRDLKPQNLLINE-RGELKLADFGLARA  153 (309)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEECcccccee
Confidence            46899999999999986 67899999987753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0592|consensus

Probab=91.55  E-value=0.22  Score=51.31  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=30.6

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ...+.|+||+|.|||+++ ++++.+-||-.|..-.+.
T Consensus       192 ~~GIIHRDlKPENILLd~-dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  192 SNGIIHRDLKPENILLDK-DGHIKITDFGSAKILSPS  227 (604)
T ss_pred             hcCceeccCChhheeEcC-CCcEEEeeccccccCChh
Confidence            468999999999999987 799999999888764443

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=91.52  E-value=0.2  Score=44.74  Aligned_cols=31  Identities=32%  Similarity=0.456  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.++||.++..
T Consensus       116 ~~i~H~di~p~nil~~~-~~~~kl~dfg~~~~  146 (257)
T cd05040         116 KRFIHRDLAARNILLAS-DDKVKIGDFGLMRA  146 (257)
T ss_pred             CCccccccCcccEEEec-CCEEEecccccccc
Confidence            46899999999999986 58899999988764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=91.51  E-value=0.19  Score=45.01  Aligned_cols=31  Identities=26%  Similarity=0.349  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||..+..
T Consensus       122 ~~i~h~di~p~nili~~-~~~~~l~d~g~~~~  152 (261)
T cd05034         122 RNYIHRDLAARNILVGE-NLVCKIADFGLARL  152 (261)
T ss_pred             CCcccCCcchheEEEcC-CCCEEECcccccee
Confidence            35899999999999976 68899999987753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=91.50  E-value=0.24  Score=44.05  Aligned_cols=31  Identities=19%  Similarity=0.253  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||+++. ++.+.|+||..+..
T Consensus       112 ~~i~h~di~p~nili~~-~~~~~l~d~g~~~~  142 (251)
T cd05041         112 KNCIHRDLAARNCLVGE-NNVLKISDFGMSRE  142 (251)
T ss_pred             CCEehhhcCcceEEEcC-CCcEEEeecccccc
Confidence            46899999999999976 67899999988764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=91.49  E-value=0.21  Score=46.60  Aligned_cols=30  Identities=20%  Similarity=0.429  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++ ++.+.++||..+.
T Consensus       119 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~  148 (308)
T cd06615         119 HKIMHRDVKPSNILVNS-RGEIKLCDFGVSG  148 (308)
T ss_pred             CCEEECCCChHHEEEec-CCcEEEccCCCcc
Confidence            35899999999999986 5789999998775

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=91.48  E-value=0.2  Score=47.80  Aligned_cols=31  Identities=16%  Similarity=0.394  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.|+||..+..
T Consensus       120 ~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~~  150 (364)
T cd05599         120 LGYIHRDIKPDNLLLDA-KGHIKLSDFGLCTG  150 (364)
T ss_pred             CCeEeccCCHHHeEECC-CCCEEEeeccccee
Confidence            35889999999999976 67899999988753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=91.47  E-value=0.091  Score=49.49  Aligned_cols=31  Identities=19%  Similarity=0.350  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.|+||..|..
T Consensus       115 ~~ivH~dlkp~Nill~~-~~~~kL~Dfg~a~~  145 (316)
T cd05592         115 KGIIYRDLKLDNVLLDK-DGHIKIADFGMCKE  145 (316)
T ss_pred             CCEEeCCCCHHHeEECC-CCCEEEccCcCCeE
Confidence            46899999999999976 67899999988763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=91.45  E-value=0.074  Score=49.39  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.||+++. ++.+.++||..+..
T Consensus       134 ~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~~  164 (297)
T cd06656         134 NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ  164 (297)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEECcCccceE
Confidence            46899999999999976 67899999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=91.45  E-value=0.17  Score=46.05  Aligned_cols=31  Identities=19%  Similarity=0.156  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.|+||..+..
T Consensus       143 ~gi~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~  173 (283)
T cd05091         143 HHVVHKDLATRNVLVFD-KLNVKISDLGLFRE  173 (283)
T ss_pred             cCccccccchhheEecC-CCceEecccccccc
Confidence            35899999999999976 57799999987663

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PHA03209 serine/threonine kinase US3; Provisional

Probab=91.45  E-value=0.21  Score=47.99  Aligned_cols=31  Identities=26%  Similarity=0.269  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||++. .+.+.|+||..+..
T Consensus       176 ~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~  206 (357)
T PHA03209        176 QRIIHRDVKTENIFIND-VDQVCIGDLGAAQF  206 (357)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEecCccccc
Confidence            35899999999999976 67899999998763

>KOG3087|consensus

Probab=91.40  E-value=0.33  Score=44.22  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=27.6

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeE--EEEeeccccCC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKV--TFIDYEYAGVN   76 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l--~lIDfEya~~n   76 (317)
                      ..-+||+||...|||+.++.+++  .+|||-.+..+
T Consensus       131 ~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  131 DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             hCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            35789999999999987655555  89999887765

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=91.40  E-value=0.19  Score=46.28  Aligned_cols=31  Identities=19%  Similarity=0.362  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||++++ ++.+.|+||.++..
T Consensus       120 ~~i~H~dl~p~nili~~-~~~~kl~dfg~~~~  150 (290)
T cd05580         120 LDIVYRDLKPENLLLDS-DGYIKITDFGFAKR  150 (290)
T ss_pred             CCEecCCCCHHHEEECC-CCCEEEeeCCCccc
Confidence            56899999999999976 57899999988764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=91.40  E-value=0.099  Score=50.11  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       145 ~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~  175 (364)
T cd07875         145 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART  175 (364)
T ss_pred             CCeecCCCCHHHEEECC-CCcEEEEeCCCccc
Confidence            46899999999999976 67899999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=91.39  E-value=0.11  Score=50.30  Aligned_cols=31  Identities=19%  Similarity=0.368  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..|..
T Consensus       161 ~~ivHrDLkp~NIll~~-~~~ikL~DfG~a~~  191 (371)
T cd05622         161 MGFIHRDVKPDNMLLDK-SGHLKLADFGTCMK  191 (371)
T ss_pred             CCEEeCCCCHHHEEECC-CCCEEEEeCCceeE
Confidence            46899999999999986 68899999988753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=91.37  E-value=0.11  Score=49.18  Aligned_cols=31  Identities=23%  Similarity=0.362  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       137 ~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~  167 (343)
T cd07878         137 AGIIHRDLKPSNVAVNE-DCELRILDFGLARQ  167 (343)
T ss_pred             CCeecccCChhhEEECC-CCCEEEcCCcccee
Confidence            46899999999999986 67899999987763

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=91.32  E-value=0.24  Score=47.24  Aligned_cols=30  Identities=30%  Similarity=0.400  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||+++ .+.+.|+||..+.
T Consensus       192 ~~ivHrDikp~Nill~~-~~~vkL~DfG~a~  221 (337)
T cd05054         192 RKCIHRDLAARNILLSE-NNVVKICDFGLAR  221 (337)
T ss_pred             CCeecCCCCcceEEEeC-CCcEEEeccccch
Confidence            46899999999999986 5789999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=91.32  E-value=0.14  Score=48.26  Aligned_cols=30  Identities=30%  Similarity=0.400  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.|+||-.+.
T Consensus       193 ~~ivHrDiKp~Nil~~~-~~~~kl~DfG~a~  222 (338)
T cd05102         193 RKCIHRDLAARNILLSE-NNVVKICDFGLAR  222 (338)
T ss_pred             CCEECCCCccceEEEcC-CCcEEEeeccccc
Confidence            46899999999999986 6789999998775

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=91.31  E-value=0.11  Score=47.83  Aligned_cols=31  Identities=23%  Similarity=0.232  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||+++ .+.+.++||..+..
T Consensus       121 ~~iiH~dikp~Nill~~-~~~~kl~Dfg~~~~  151 (285)
T cd05631         121 ERIVYRDLKPENILLDD-RGHIRISDLGLAVQ  151 (285)
T ss_pred             CCEEeCCCCHHHEEECC-CCCEEEeeCCCcEE
Confidence            46899999999999976 57899999987754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=91.30  E-value=0.19  Score=46.75  Aligned_cols=31  Identities=26%  Similarity=0.298  Sum_probs=25.4

Q ss_pred             eeeeecCCCCCCeeeeC---CCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||+..   ..+.+.|+||..|.
T Consensus       127 ~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868         127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence            35899999999999942   24679999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=91.29  E-value=0.22  Score=48.30  Aligned_cols=30  Identities=23%  Similarity=0.467  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++. .+.+.|+||..+.
T Consensus       120 ~givHrDlKp~Nili~~-~~~~kL~DFGl~~  149 (381)
T cd05626         120 MGFIHRDIKPDNILIDL-DGHIKLTDFGLCT  149 (381)
T ss_pred             CCeeecCCcHHHEEECC-CCCEEEeeCcCCc
Confidence            46899999999999976 6889999998764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=91.29  E-value=0.088  Score=50.35  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.|+||..+..
T Consensus       142 ~~ivHrDlkp~NIl~~~-~~~~kl~Dfg~a~~  172 (359)
T cd07876         142 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART  172 (359)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEecCCCccc
Confidence            46899999999999976 68899999988764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=91.28  E-value=0.2  Score=45.47  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||++++ .+.+.++||..+..-
T Consensus       118 ~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~~  149 (286)
T cd07832         118 NGIMHRDLKPANLLISA-DGVLKIADFGLARLF  149 (286)
T ss_pred             CCeecCCcCHHHEEEcC-CCcEEEeeeeecccc
Confidence            35899999999999986 678999999887643

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0588|consensus

Probab=91.28  E-value=0.12  Score=54.44  Aligned_cols=49  Identities=18%  Similarity=0.379  Sum_probs=36.2

Q ss_pred             HHHHHHHHhc--CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          30 WQYIETALSK--TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        30 ~~~L~~~l~~--~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      +..+.+.+..  .....-+||+||+|.|+|++. .++|.+=||-+|..-.++
T Consensus       115 a~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~-~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen  115 AHFFRQILDGVSYCHAFNICHRDLKPENLLLDV-KNNIKIADFGMASLEVPG  165 (786)
T ss_pred             HHHHHHHHHHHHHHhhhcceeccCCchhhhhhc-ccCEeeeccceeecccCC
Confidence            3344444432  245678999999999999987 455999999999876554

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=91.28  E-value=0.12  Score=47.16  Aligned_cols=31  Identities=26%  Similarity=0.460  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||.++..
T Consensus       128 ~~iiH~dlkp~Nil~~~-~~~~kL~dfG~~~~  158 (279)
T cd05109         128 VRLVHRDLAARNVLVKS-PNHVKITDFGLARL  158 (279)
T ss_pred             CCeeccccccceEEEcC-CCcEEECCCCceee
Confidence            45899999999999975 67899999987754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=91.24  E-value=0.23  Score=45.14  Aligned_cols=31  Identities=26%  Similarity=0.280  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||++++ ++.+.++||..+..
T Consensus       138 ~~~vH~dlkp~Nil~~~-~~~~~l~dfg~~~~  168 (277)
T cd05062         138 NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRD  168 (277)
T ss_pred             CCcccCCcchheEEEcC-CCCEEECCCCCccc
Confidence            35899999999999986 67899999987653

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=91.23  E-value=0.19  Score=46.79  Aligned_cols=31  Identities=26%  Similarity=0.358  Sum_probs=26.8

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...++|+|++|.|||+++ ++.+.|+||..+.
T Consensus       142 ~~gi~H~dlkp~Nili~~-~~~~kl~dfg~~~  172 (303)
T cd05088         142 QKQFIHRDLAARNILVGE-NYVAKIADFGLSR  172 (303)
T ss_pred             hCCccccccchheEEecC-CCcEEeCccccCc
Confidence            357899999999999976 6789999998874

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=91.18  E-value=0.13  Score=45.90  Aligned_cols=31  Identities=19%  Similarity=0.258  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.++||..+..
T Consensus       112 ~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~  142 (250)
T cd05085         112 KNCIHRDLAARNCLVGE-NNVLKISDFGMSRQ  142 (250)
T ss_pred             CCeeecccChheEEEcC-CCeEEECCCcccee
Confidence            46899999999999976 67899999998753

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=91.16  E-value=0.24  Score=47.72  Aligned_cols=31  Identities=23%  Similarity=0.373  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+..
T Consensus       122 ~~ivH~dlkp~Nili~~-~~~~kL~Dfg~a~~  152 (372)
T cd07853         122 AGILHRDIKPGNLLVNS-NCVLKICDFGLARV  152 (372)
T ss_pred             CCeeCCCCChHHEEECC-CCCEEeccccceee
Confidence            35899999999999986 67899999998764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=91.12  E-value=0.26  Score=45.16  Aligned_cols=31  Identities=23%  Similarity=0.368  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+..
T Consensus       124 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~  154 (290)
T cd05613         124 LGIIYRDIKLENILLDS-NGHVVLTDFGLSKE  154 (290)
T ss_pred             CCeeccCCCHHHeEECC-CCCEEEeeCcccee
Confidence            46899999999999986 67899999987653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=91.12  E-value=0.11  Score=49.68  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|+||+++. ++.+.|+||..+..
T Consensus       138 ~givHrDikp~Nill~~-~~~~kl~Dfg~~~~  168 (355)
T cd07874         138 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART  168 (355)
T ss_pred             CCcccCCCChHHEEECC-CCCEEEeeCccccc
Confidence            46899999999999976 67899999998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=91.10  E-value=0.21  Score=46.06  Aligned_cols=31  Identities=23%  Similarity=0.160  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ .+.+.++||.++..
T Consensus       121 ~~iiH~dikp~Nili~~-~~~~kl~Dfg~~~~  151 (285)
T cd05632         121 ENTVYRDLKPENILLDD-YGHIRISDLGLAVK  151 (285)
T ss_pred             CCeeecCCCHHHEEECC-CCCEEEecCCccee
Confidence            45899999999999976 57899999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=91.07  E-value=0.18  Score=43.66  Aligned_cols=35  Identities=29%  Similarity=0.331  Sum_probs=29.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ..++|+|+.+.||++++ ++.+.++||+.+..-...
T Consensus       106 ~~i~h~~i~~~ni~~~~-~~~~~l~d~~~~~~~~~~  140 (244)
T smart00220      106 NGIIHRDLKPENILLDE-DGHVKLADFGLARQLDPG  140 (244)
T ss_pred             cCeecCCcCHHHeEECC-CCcEEEccccceeeeccc
Confidence            37899999999999986 578999999988865443

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=91.06  E-value=0.25  Score=44.60  Aligned_cols=31  Identities=26%  Similarity=0.377  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+.|+|+++.||++++ ++.+.++||..+..
T Consensus       119 ~~i~H~dl~p~nili~~-~~~~kl~d~g~~~~  149 (256)
T cd05113         119 KQFIHRDLAARNCLVDD-QGCVKVSDFGLSRY  149 (256)
T ss_pred             CCeeccccCcceEEEcC-CCCEEECCCcccee
Confidence            46899999999999976 57899999987753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=91.04  E-value=0.11  Score=46.86  Aligned_cols=31  Identities=26%  Similarity=0.367  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.++||..+..
T Consensus       131 ~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~  161 (272)
T cd05075         131 KSFIHRDLAARNCMLNE-NMNVCVADFGLSKK  161 (272)
T ss_pred             CCeeccccchhheEEcC-CCCEEECCCCcccc
Confidence            35899999999999976 67899999987653

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=91.04  E-value=0.29  Score=44.22  Aligned_cols=33  Identities=21%  Similarity=0.226  Sum_probs=27.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ..++|+|+++.||++++ ++.+.++||.++....
T Consensus       117 ~~i~H~dl~p~nili~~-~~~~~l~df~~~~~~~  149 (283)
T cd05118         117 HGILHRDLKPENLLINT-EGVLKLADFGLARSFG  149 (283)
T ss_pred             CCeeecCcCHHHEEECC-CCcEEEeeeeeeEecC
Confidence            45899999999999986 6789999999886443

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=91.03  E-value=0.23  Score=44.45  Aligned_cols=31  Identities=26%  Similarity=0.279  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||+++..
T Consensus       123 ~~i~h~dl~~~nilv~~-~~~~kl~d~g~~~~  153 (261)
T cd05148         123 QNSIHRDLAARNILVGE-DLVCKVADFGLARL  153 (261)
T ss_pred             CCeeccccCcceEEEcC-CceEEEccccchhh
Confidence            35899999999999986 57899999998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=91.02  E-value=0.15  Score=46.56  Aligned_cols=32  Identities=25%  Similarity=0.375  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.||++++ ++.+.++||.++...
T Consensus       126 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~  157 (283)
T cd05080         126 QHYIHRDLAARNVLLDN-DRLVKIGDFGLAKAV  157 (283)
T ss_pred             CCeeccccChheEEEcC-CCcEEEeeccccccc
Confidence            46899999999999976 578999999987643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=91.01  E-value=0.25  Score=45.47  Aligned_cols=32  Identities=22%  Similarity=0.217  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++|.||++++ ++.+.|+||.++..
T Consensus       141 ~~~i~H~dlkp~Nil~~~-~~~~~l~dfg~a~~  172 (291)
T cd05094         141 SQHFVHRDLATRNCLVGA-NLLVKIGDFGMSRD  172 (291)
T ss_pred             hCCeeecccCcceEEEcc-CCcEEECCCCcccc
Confidence            346899999999999986 67899999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=91.00  E-value=0.16  Score=52.41  Aligned_cols=33  Identities=24%  Similarity=0.429  Sum_probs=28.4

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .-.|-|.|+|||||++++ ++++.++||-..|.=
T Consensus       283 ~dgffHaDpHpGNi~v~~-~g~i~~lDfGi~g~l  315 (517)
T COG0661         283 RDGFFHADPHPGNILVRS-DGRIVLLDFGIVGRL  315 (517)
T ss_pred             hcCccccCCCccceEEec-CCcEEEEcCcceecC
Confidence            468999999999999987 689999999777643

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=90.99  E-value=0.23  Score=44.56  Aligned_cols=32  Identities=28%  Similarity=0.383  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+||.+.||++++ ++.+.++||+.+...
T Consensus       119 ~~i~h~dl~~~nil~~~-~~~~~l~d~~~~~~~  150 (258)
T cd05578         119 KGIIHRDIKPDNILLDE-QGHVHITDFNIATKV  150 (258)
T ss_pred             CCeeccCCCHHHeEEcC-CCCEEEeeccccccc
Confidence            45899999999999986 678999999877654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=90.96  E-value=0.23  Score=45.97  Aligned_cols=30  Identities=23%  Similarity=0.351  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus       138 ~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~  167 (297)
T cd05089         138 KQFIHRDLAARNVLVGE-NLASKIADFGLSR  167 (297)
T ss_pred             CCcccCcCCcceEEECC-CCeEEECCcCCCc
Confidence            46899999999999976 5789999998775

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=90.94  E-value=0.36  Score=43.72  Aligned_cols=39  Identities=23%  Similarity=0.413  Sum_probs=32.8

Q ss_pred             ceEEEeecCccCCCCCCCCc-ccHHHHHHHHHhhcccCCC
Q psy8745         207 GLVYQYVRGVTITPDSIREP-HIHPLVARNMARLHKVHSN  245 (317)
Q Consensus       207 G~~e~fi~g~tL~~~~l~~~-~i~~~IA~~la~~H~~~~~  245 (317)
                      +.+.+||+|++++...+.++ .+...+|+-|+++|.+.++
T Consensus        70 ~~l~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~  109 (235)
T cd05155          70 WSVYRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPS  109 (235)
T ss_pred             eEEEEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence            46999999999988877765 5778899999999998764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=90.90  E-value=0.2  Score=45.86  Aligned_cols=31  Identities=26%  Similarity=0.397  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.++||.++..
T Consensus       124 ~~~~H~dl~p~nil~~~-~~~~~l~dfg~~~~  154 (288)
T cd05583         124 LGIIYRDIKLENILLDS-EGHVVLTDFGLSKE  154 (288)
T ss_pred             CCeeccCCCHHHeEECC-CCCEEEEECccccc
Confidence            46899999999999976 57899999987653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=90.89  E-value=0.29  Score=43.75  Aligned_cols=31  Identities=26%  Similarity=0.293  Sum_probs=26.7

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...++|+|++|.||++++ ++.+.++||..+.
T Consensus       118 ~~~i~H~dl~p~nili~~-~~~~~l~dfg~~~  148 (255)
T cd08219         118 EKRVLHRDIKSKNIFLTQ-NGKVKLGDFGSAR  148 (255)
T ss_pred             hCCcccCCCCcceEEECC-CCcEEEcccCcce
Confidence            347899999999999976 6789999999775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=90.89  E-value=0.34  Score=44.52  Aligned_cols=31  Identities=19%  Similarity=0.459  Sum_probs=26.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...++|+|+++.||+++. ++.+.|+||..+.
T Consensus       128 ~~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~  158 (292)
T cd06644         128 SMKIIHRDLKAGNVLLTL-DGDIKLADFGVSA  158 (292)
T ss_pred             cCCeeecCCCcceEEEcC-CCCEEEccCccce
Confidence            357899999999999975 6789999997654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=90.85  E-value=0.24  Score=44.83  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||.++..
T Consensus       125 ~~i~h~dlkp~nili~~-~~~~~l~dfg~~~~  155 (267)
T cd05066         125 MGYVHRDLAARNILVNS-NLVCKVSDFGLSRV  155 (267)
T ss_pred             CCEeehhhchhcEEECC-CCeEEeCCCCcccc
Confidence            45899999999999976 67899999987753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=90.84  E-value=0.19  Score=46.25  Aligned_cols=31  Identities=23%  Similarity=0.348  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||.++..
T Consensus       134 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~  164 (311)
T cd07866         134 NHILHRDIKAANILIDN-QGILKIADFGLARP  164 (311)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEECcCccchh
Confidence            46899999999999986 67899999988864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=90.83  E-value=0.28  Score=45.03  Aligned_cols=31  Identities=26%  Similarity=0.259  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.|+||.++..
T Consensus       139 ~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~~  169 (288)
T cd05093         139 QHFVHRDLATRNCLVGE-NLLVKIGDFGMSRD  169 (288)
T ss_pred             CCeeecccCcceEEEcc-CCcEEeccCCcccc
Confidence            46899999999999976 67899999998763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase

Probab=90.83  E-value=0.36  Score=49.93  Aligned_cols=44  Identities=25%  Similarity=0.426  Sum_probs=33.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccc---------cCCchhhhHHHHHHHhh
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYA---------GVNYQAFDIANHFDEFA   90 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya---------~~n~~~fDiAn~~~E~~   90 (317)
                      .=||+|+|-+|+|+..  ++.+|||||-=         ....|.-|+|.++..+.
T Consensus       380 ~RiHGD~HLgqvL~t~--~d~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGMLRSf~  432 (528)
T TIGR02457       380 IRIHGDFHLGQVLVVQ--DDAVLIDFEGEPARPLAERRAKRSPLRDVAGMLRSFD  432 (528)
T ss_pred             EeEecCcchhcEEEeC--CCeEEEcCCCCCCCChHHhccCCChHHHHHHHHHHHH
Confidence            3399999999999974  56779999861         34567778888877654

Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=90.83  E-value=0.32  Score=43.36  Aligned_cols=32  Identities=13%  Similarity=0.012  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCC------eEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETED------KVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~------~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++....      .+.+.||.++..
T Consensus       120 ~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037         120 KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             CCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence            46899999999999975321      599999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=90.81  E-value=0.13  Score=46.47  Aligned_cols=30  Identities=33%  Similarity=0.333  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.++||..+.
T Consensus       119 ~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~  148 (269)
T cd05042         119 ADFIHSDLALRNCQLTA-DLSVKIGDYGLAL  148 (269)
T ss_pred             cCEecccccHhheEecC-CCcEEEecccccc
Confidence            35799999999999986 6789999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=90.79  E-value=0.29  Score=44.42  Aligned_cols=30  Identities=27%  Similarity=0.372  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.++||..+.
T Consensus       131 ~~i~H~dikp~nili~~-~~~~kl~dfgl~~  160 (270)
T cd05047         131 KQFIHRDLAARNILVGE-NYVAKIADFGLSR  160 (270)
T ss_pred             CCEeecccccceEEEcC-CCeEEECCCCCcc
Confidence            57899999999999976 6789999998874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=90.76  E-value=0.25  Score=44.13  Aligned_cols=30  Identities=23%  Similarity=0.288  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||+++. .+.+.++||+.+.
T Consensus       119 ~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~  148 (256)
T cd05112         119 SNVIHRDLAARNCLVGE-NQVVKVSDFGMTR  148 (256)
T ss_pred             CCccccccccceEEEcC-CCeEEECCCccee
Confidence            35899999999999975 5789999998765

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=90.73  E-value=0.33  Score=43.60  Aligned_cols=31  Identities=19%  Similarity=0.341  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||..+..
T Consensus       114 ~~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~  144 (257)
T cd05116         114 TNFVHRDLAARNVLLVT-QHYAKISDFGLSKA  144 (257)
T ss_pred             CCEeecccchhhEEEcC-CCeEEECCCccccc
Confidence            35799999999999976 57799999987753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=90.72  E-value=0.11  Score=49.13  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.|+||..+..
T Consensus       115 ~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~  145 (329)
T cd05588         115 RGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKE  145 (329)
T ss_pred             CCeEecCCCHHHeEECC-CCCEEECcCccccc
Confidence            46899999999999976 67899999987753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=90.71  E-value=0.4  Score=42.45  Aligned_cols=32  Identities=22%  Similarity=0.300  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||+++. .+.+.++||..+...
T Consensus       112 ~~~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~  143 (250)
T cd05123         112 LGIIYRDLKPENILLDA-DGHIKLTDFGLAKEL  143 (250)
T ss_pred             CCceecCCCcceEEEcC-CCcEEEeecCcceec
Confidence            56899999999999976 678999999877643

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=90.70  E-value=0.17  Score=46.39  Aligned_cols=31  Identities=16%  Similarity=0.227  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.++||..+..
T Consensus       114 ~~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~  144 (277)
T cd05607         114 MDIVYRDMKPENVLLDD-QGNCRLSDLGLAVE  144 (277)
T ss_pred             CCEEEccCChHhEEEcC-CCCEEEeeceeeee
Confidence            46899999999999976 67899999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=90.68  E-value=0.25  Score=45.49  Aligned_cols=30  Identities=17%  Similarity=0.402  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus       134 ~~i~H~dl~p~Nil~~~-~~~~~l~d~g~~~  163 (285)
T cd06648         134 QGVIHRDIKSDSILLTS-DGRVKLSDFGFCA  163 (285)
T ss_pred             CCeecCCCChhhEEEcC-CCcEEEcccccch
Confidence            46899999999999976 6789999998665

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=90.67  E-value=0.25  Score=46.49  Aligned_cols=31  Identities=26%  Similarity=0.329  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.||++++ ++.+.|+||..+..
T Consensus       120 ~~ivHrdlkp~Nill~~-~~~~kL~Dfg~~~~  150 (324)
T cd05589         120 NKIVYRDLKLDNLLLDT-EGFVKIADFGLCKE  150 (324)
T ss_pred             CCeEecCCCHHHeEECC-CCcEEeCcccCCcc
Confidence            45899999999999986 68899999987753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=90.66  E-value=0.51  Score=43.32  Aligned_cols=30  Identities=23%  Similarity=0.390  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|+++.||+++..++.+.+.||..+.
T Consensus       122 ~i~H~dl~p~nill~~~~~~~kl~dfg~~~  151 (294)
T PLN00009        122 RVLHRDLKPQNLLIDRRTNALKLADFGLAR  151 (294)
T ss_pred             CeeCCCCCcceEEEECCCCEEEEccccccc
Confidence            589999999999998645678999998875

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=90.62  E-value=0.13  Score=49.78  Aligned_cols=30  Identities=20%  Similarity=0.399  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus       161 ~~ivHrDLkp~NILl~~-~~~~kL~DfG~~~  190 (370)
T cd05596         161 MGFIHRDVKPDNMLLDK-SGHLKLADFGTCM  190 (370)
T ss_pred             CCeeccCCCHHHEEEcC-CCCEEEEecccee
Confidence            45899999999999986 6889999998765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0581|consensus

Probab=90.61  E-value=0.25  Score=48.55  Aligned_cols=36  Identities=17%  Similarity=0.358  Sum_probs=30.3

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ..-+.|+|++|.|||++. .|.|.|=||--++.--..
T Consensus       197 ~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~lvnS  232 (364)
T KOG0581|consen  197 ERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGILVNS  232 (364)
T ss_pred             ccCeeeccCCHHHeeecc-CCCEEeccccccHHhhhh
Confidence            478899999999999987 799999999888853333

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=90.61  E-value=0.3  Score=44.88  Aligned_cols=51  Identities=16%  Similarity=0.178  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .+.+...+..+.+.|.-. ....++|+|+.+.||+++. ++.+.++||..+..
T Consensus       101 ~~~~~~~~~qi~~al~~l-H~~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~  151 (298)
T cd07841         101 PADIKSYMLMTLRGLEYL-HSNWILHRDLKPNNLLIAS-DGVLKLADFGLARS  151 (298)
T ss_pred             HHHHHHHHHHHHHHHHHH-HhCCeeecCCChhhEEEcC-CCCEEEccceeeee
Confidence            444444443333333221 1235899999999999986 67899999987753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PHA03210 serine/threonine kinase US3; Provisional

Probab=90.60  E-value=0.27  Score=50.04  Aligned_cols=30  Identities=27%  Similarity=0.368  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. ++.++|+||..+.
T Consensus       286 ~gIiHrDLKP~NILl~~-~~~vkL~DFGla~  315 (501)
T PHA03210        286 KKLIHRDIKLENIFLNC-DGKIVLGDFGTAM  315 (501)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEEeCCCce
Confidence            46899999999999976 6789999998775

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=90.59  E-value=0.24  Score=45.58  Aligned_cols=30  Identities=30%  Similarity=0.310  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++ ++.+.++||..+.
T Consensus       116 ~~ivH~dikp~Nil~~~-~~~~~l~dfg~~~  145 (279)
T cd05633         116 RFVVYRDLKPANILLDE-HGHVRISDLGLAC  145 (279)
T ss_pred             CCcCCCCCCHHHEEECC-CCCEEEccCCcce
Confidence            34799999999999976 6789999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=90.59  E-value=0.12  Score=47.50  Aligned_cols=30  Identities=23%  Similarity=0.244  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++ ++.+.++||..+.
T Consensus       116 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~  145 (280)
T cd05608         116 RRIIYRDLKPENVLLDN-DGNVRISDLGLAV  145 (280)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEeeCccce
Confidence            46899999999999976 6789999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=90.56  E-value=0.28  Score=44.04  Aligned_cols=30  Identities=30%  Similarity=0.408  Sum_probs=25.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.++||..+..
T Consensus       120 ~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~  149 (256)
T cd05059         120 GFIHRDLAARNCLVGE-DNVVKVSDFGLARY  149 (256)
T ss_pred             CcccccccHhhEEECC-CCcEEECCccccee
Confidence            4899999999999976 67899999987753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.56  E-value=0.26  Score=44.71  Aligned_cols=59  Identities=22%  Similarity=0.323  Sum_probs=47.7

Q ss_pred             CcchhhhhcCC-CCceEEEecCc--eEEEeecCccCCC-CCCCCcccHHHHHHHHHhhcccCC
Q psy8745         186 PSPQILHRAGL-APRLYAEFDNG--LVYQYVRGVTITP-DSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       186 ~~~~~L~~~~~-gp~l~g~F~nG--~~e~fi~g~tL~~-~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      ..+..+.+.|+ .|-||-+.++.  ++=|||+|+.|.. -+-..|.+++.|.+.++++|.-.+
T Consensus        51 ril~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~gi  113 (204)
T COG3642          51 RILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGI  113 (204)
T ss_pred             HHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCe
Confidence            55667778888 78899999999  8999999998872 112258899999999999998653

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=90.55  E-value=0.16  Score=45.54  Aligned_cols=31  Identities=23%  Similarity=0.309  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       123 ~~i~H~dl~p~nilv~~-~~~~~l~dfg~~~~  153 (263)
T cd06625         123 NMIVHRDIKGANILRDS-AGNVKLGDFGASKR  153 (263)
T ss_pred             CCeecCCCCHHHEEEcC-CCCEEEeeccccee
Confidence            46799999999999976 67899999988753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=90.54  E-value=0.26  Score=43.88  Aligned_cols=32  Identities=25%  Similarity=0.359  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++++++.+.+.||..+..
T Consensus       120 ~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~  151 (256)
T cd08220         120 KLILHRDLKTQNILLDKHKMVVKIGDFGISKI  151 (256)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence            47899999999999976455678999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=90.51  E-value=0.23  Score=46.92  Aligned_cols=30  Identities=23%  Similarity=0.413  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.|+||.++.
T Consensus       124 ~givH~dlkp~Nili~~-~~~~kl~Dfg~a~  153 (332)
T cd07857         124 ANVLHRDLKPGNLLVNA-DCELKICDFGLAR  153 (332)
T ss_pred             CCcccCCCCHHHeEEcC-CCCEEeCcCCCce
Confidence            45899999999999976 6789999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=90.50  E-value=0.38  Score=44.02  Aligned_cols=31  Identities=23%  Similarity=0.377  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+.|+|+++.||++++ ++.+.++||..+..
T Consensus       128 ~~iiH~dlkp~nili~~-~~~~kl~Dfg~~~~  158 (279)
T cd05111         128 HRMVHRNLAARNILLKS-DSIVQIADFGVADL  158 (279)
T ss_pred             CCEeccccCcceEEEcC-CCcEEEcCCcccee
Confidence            34899999999999976 67899999988753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=90.45  E-value=0.11  Score=47.98  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||..+..
T Consensus       123 ~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~  153 (301)
T cd07873         123 RKVLHRDLKPQNLLINE-RGELKLADFGLARA  153 (301)
T ss_pred             CCeeCCCCCHHHEEECC-CCcEEECcCcchhc
Confidence            46899999999999976 57899999987753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=90.38  E-value=0.18  Score=47.20  Aligned_cols=31  Identities=23%  Similarity=0.325  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.|+||..+..
T Consensus       153 ~gi~H~dlkp~Nill~~-~~~~kL~Dfg~~~~  183 (314)
T cd05099         153 RRCIHRDLAARNVLVTE-DNVMKIADFGLARG  183 (314)
T ss_pred             CCeeeccccceeEEEcC-CCcEEEcccccccc
Confidence            46899999999999976 67899999988763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03207 serine/threonine kinase US3; Provisional

Probab=90.35  E-value=0.2  Score=48.93  Aligned_cols=30  Identities=27%  Similarity=0.314  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||++.|||++. .+.++|+||..+.
T Consensus       204 ~givHrDlkp~Nill~~-~~~~~l~DfG~a~  233 (392)
T PHA03207        204 RGIIHRDVKTENIFLDE-PENAVLGDFGAAC  233 (392)
T ss_pred             CCccccCCCHHHEEEcC-CCCEEEccCcccc
Confidence            46899999999999986 6789999998775

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=90.35  E-value=0.32  Score=43.96  Aligned_cols=31  Identities=23%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. .+.+.++||..+..
T Consensus       126 ~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~  156 (270)
T cd05056         126 KRFVHRDIAARNVLVSS-PDCVKLGDFGLSRY  156 (270)
T ss_pred             CCeeccccChheEEEec-CCCeEEccCceeee
Confidence            46899999999999986 67899999987754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=90.34  E-value=0.16  Score=46.50  Aligned_cols=32  Identities=22%  Similarity=0.410  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++|.||++++ ++.+.|+||..+..
T Consensus       127 ~~gi~H~dlkp~Nil~~~-~~~~~l~dfg~~~~  158 (284)
T cd05079         127 SRQYVHRDLAARNVLVES-EHQVKIGDFGLTKA  158 (284)
T ss_pred             HCCeeecccchheEEEcC-CCCEEECCCccccc
Confidence            346899999999999976 67899999987763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=90.29  E-value=0.18  Score=45.64  Aligned_cols=31  Identities=16%  Similarity=0.237  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||+++...+.+.|+||..+.
T Consensus       127 ~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624         127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            4689999999999997645789999998764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=90.28  E-value=0.29  Score=43.91  Aligned_cols=31  Identities=23%  Similarity=0.290  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||+++..
T Consensus       119 ~~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~  149 (256)
T cd05114         119 NSFIHRDLAARNCLVSS-TGVVKVSDFGMTRY  149 (256)
T ss_pred             CCccccccCcceEEEcC-CCeEEECCCCCccc
Confidence            45899999999999976 67899999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=90.28  E-value=0.27  Score=43.86  Aligned_cols=32  Identities=16%  Similarity=0.204  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||++++ ++.+.+.||..+...
T Consensus       120 ~~i~h~dl~p~ni~~~~-~~~~kl~d~~~~~~~  151 (256)
T cd08221         120 AGILHRDIKTLNIFLTK-AGLIKLGDFGISKIL  151 (256)
T ss_pred             CCccccCCChHhEEEeC-CCCEEECcCcceEEc
Confidence            45789999999999986 678999999887643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=90.25  E-value=0.34  Score=44.11  Aligned_cols=32  Identities=22%  Similarity=0.344  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||++++ .+.+.|+||.++..-
T Consensus       128 ~~i~H~di~p~nil~~~-~~~~kL~dfg~~~~~  159 (279)
T cd05057         128 KRLVHRDLAARNVLVKT-PQHVKITDFGLAKLL  159 (279)
T ss_pred             CCEEecccCcceEEEcC-CCeEEECCCcccccc
Confidence            57899999999999976 678999999988643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=90.25  E-value=0.22  Score=44.84  Aligned_cols=32  Identities=28%  Similarity=0.390  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|+.+.||+++. ++.+.++||..+..
T Consensus       120 ~~~~~H~dl~~~ni~i~~-~~~~~l~df~~~~~  151 (280)
T cd05581         120 SKGIIHRDLKPENILLDK-DMHIKITDFGTAKV  151 (280)
T ss_pred             HCCeeecCCCHHHeEECC-CCCEEecCCccccc
Confidence            346899999999999976 67899999987763

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=90.14  E-value=0.28  Score=43.56  Aligned_cols=32  Identities=25%  Similarity=0.393  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+...
T Consensus       112 ~~i~H~di~~~nil~~~-~~~~~l~dfg~~~~~  143 (265)
T cd05579         112 NGIIHRDLKPDNILIDS-NGHLKLTDFGLSKVG  143 (265)
T ss_pred             cCeecCCCCHHHeEEcC-CCCEEEEecccchhc
Confidence            46899999999999986 678999999876643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=90.14  E-value=0.16  Score=45.87  Aligned_cols=32  Identities=19%  Similarity=0.269  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.||++++ ++.+.++||.++...
T Consensus       125 ~~i~H~di~p~nili~~-~~~~~l~dfg~~~~~  156 (266)
T cd05033         125 MNYVHRDLAARNILVNS-NLVCKVSDFGLSRRL  156 (266)
T ss_pred             CCcccCCCCcceEEEcC-CCCEEECccchhhcc
Confidence            46899999999999986 678999999877643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=90.13  E-value=0.18  Score=45.10  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ .+.+.|+||.++..
T Consensus       120 ~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~  150 (262)
T cd06613         120 TGKIHRDIKGANILLTE-DGDVKLADFGVSAQ  150 (262)
T ss_pred             CCceecCCChhhEEECC-CCCEEECccccchh
Confidence            46899999999999986 67899999988753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=90.11  E-value=0.31  Score=44.32  Aligned_cols=30  Identities=20%  Similarity=0.355  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||+++. ++.+.|+||..+.
T Consensus       118 ~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~  147 (284)
T cd07839         118 HNVLHRDLKPQNLLINK-NGELKLADFGLAR  147 (284)
T ss_pred             CCEecCCCCHHHEEEcC-CCcEEECccchhh
Confidence            36899999999999986 6789999998775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=90.06  E-value=0.35  Score=43.01  Aligned_cols=31  Identities=26%  Similarity=0.241  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ .+.+.++||..+..
T Consensus       120 ~~i~h~dl~~~nili~~-~~~~~l~df~~~~~  150 (256)
T cd08529         120 KKILHRDIKSLNLFLDA-YDNVKIGDLGVAKL  150 (256)
T ss_pred             CCcccCCCCcceEEEeC-CCCEEEccccccee
Confidence            47899999999999986 67899999987663

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PTZ00284 protein kinase; Provisional

Probab=89.95  E-value=0.3  Score=48.82  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=24.2

Q ss_pred             eeeeecCCCCCCeeeeCCCC---------------eEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETED---------------KVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~---------------~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++..+.               .+.|+||..+.
T Consensus       251 ~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~  296 (467)
T PTZ00284        251 LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCC  296 (467)
T ss_pred             CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccc
Confidence            46899999999999975221               48899998654

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=89.94  E-value=0.15  Score=48.13  Aligned_cols=30  Identities=23%  Similarity=0.375  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus       120 ~~ivHrDikp~Nill~~-~~~ikL~Dfg~~~  149 (323)
T cd05615         120 RGIIYRDLKLDNVMLDS-EGHIKIADFGMCK  149 (323)
T ss_pred             CCeeccCCCHHHeEECC-CCCEEEecccccc
Confidence            46899999999999986 6789999998765

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=89.90  E-value=0.38  Score=43.57  Aligned_cols=30  Identities=23%  Similarity=0.254  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.|.||+++. .+.+.|+||..+.
T Consensus       141 ~~i~h~dlkp~nili~~-~~~~kl~d~g~~~  170 (280)
T cd05049         141 QHFVHRDLATRNCLVGY-DLVVKIGDFGMSR  170 (280)
T ss_pred             CCeeccccccceEEEcC-CCeEEECCcccce
Confidence            35899999999999976 5889999998775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=89.88  E-value=0.34  Score=44.04  Aligned_cols=31  Identities=26%  Similarity=0.291  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       143 ~~i~H~dlkp~Nil~~~-~~~~~L~dfg~~~~  173 (283)
T cd05048         143 HHFVHRDLAARNCLVGE-GLTVKISDFGLSRD  173 (283)
T ss_pred             CCeeccccccceEEEcC-CCcEEECCCcceee
Confidence            35899999999999976 57899999987753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=89.87  E-value=0.44  Score=43.93  Aligned_cols=30  Identities=20%  Similarity=0.382  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.++||..+.
T Consensus       149 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~  178 (296)
T cd05095         149 LNFVHRDLATRNCLVGK-NYTIKIADFGMSR  178 (296)
T ss_pred             CCeecccCChheEEEcC-CCCEEeccCcccc
Confidence            35899999999999976 6789999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=89.86  E-value=0.16  Score=46.30  Aligned_cols=31  Identities=23%  Similarity=0.315  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ .+.+.++||..+..
T Consensus       143 ~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~  173 (286)
T cd06638         143 NKTIHRDVKGNNILLTT-EGGVKLVDFGVSAQ  173 (286)
T ss_pred             CCccccCCCHHhEEECC-CCCEEEccCCceee
Confidence            36899999999999976 57799999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=89.85  E-value=0.33  Score=44.77  Aligned_cols=31  Identities=19%  Similarity=0.338  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||..+..
T Consensus       148 ~~i~H~dlkp~Nill~~-~~~~kl~dfg~~~~  178 (295)
T cd05097         148 LNFVHRDLATRNCLVGN-HYTIKIADFGMSRN  178 (295)
T ss_pred             cCeeccccChhhEEEcC-CCcEEecccccccc
Confidence            46799999999999976 57899999987753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=89.79  E-value=0.17  Score=46.25  Aligned_cols=31  Identities=19%  Similarity=0.368  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.++||..+..
T Consensus       119 ~~i~H~dlkp~Nill~~-~~~~kl~Dfg~~~~  149 (287)
T cd07848         119 NDIVHRDIKPENLLISH-NDVLKLCDFGFARN  149 (287)
T ss_pred             CCeecCCCCHHHEEEcC-CCcEEEeeccCccc
Confidence            45899999999999976 67899999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0616|consensus

Probab=89.77  E-value=0.45  Score=45.96  Aligned_cols=45  Identities=16%  Similarity=0.247  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+|+-..-+.|.+    .-+..+||+|.|||+|. +|-|.++||-+|-.
T Consensus       149 YAAeivlAleylH~----~~iiYRDLKPENiLlD~-~G~iKitDFGFAK~  193 (355)
T KOG0616|consen  149 YAAEIVLALEYLHS----LDIIYRDLKPENLLLDQ-NGHIKITDFGFAKR  193 (355)
T ss_pred             HHHHHHHHHHHHHh----cCeeeccCChHHeeecc-CCcEEEEeccceEE
Confidence            34455554555544    56889999999999987 78999999988864

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=89.77  E-value=0.35  Score=44.93  Aligned_cols=30  Identities=20%  Similarity=0.426  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+.+.||++++ .+.+.|+||.++..
T Consensus       128 ~i~H~dl~p~nil~~~-~~~~kL~dfg~~~~  157 (309)
T cd07845         128 FIIHRDLKVSNLLLTD-KGCLKIADFGLART  157 (309)
T ss_pred             CeecCCCCHHHEEECC-CCCEEECccceeee
Confidence            4899999999999976 67899999988764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=89.73  E-value=0.39  Score=44.49  Aligned_cols=31  Identities=19%  Similarity=0.313  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++++||+++. ++.+.+.||..+..
T Consensus       120 ~~ivH~dlk~~Nili~~-~~~~kl~d~~~~~~  150 (314)
T cd08216         120 KGFIHRSVKASHILLSG-DGKVVLSGLRYSVS  150 (314)
T ss_pred             CCeecCCCCcceEEEec-CCceEEecCcccee
Confidence            35899999999999986 67899999987653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=89.73  E-value=0.34  Score=43.69  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. .+.+.|+||.++..
T Consensus       125 ~~i~H~dl~p~nil~~~-~~~~~l~Dfg~~~~  155 (265)
T cd06652         125 NMIVHRDIKGANILRDS-VGNVKLGDFGASKR  155 (265)
T ss_pred             CCEecCCCCHHHEEecC-CCCEEECcCccccc
Confidence            34899999999999976 67899999987763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=89.72  E-value=0.5  Score=43.10  Aligned_cols=32  Identities=31%  Similarity=0.648  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++.+.+.+.++||..+..
T Consensus       128 ~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390        128 HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             CCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            35899999999999987433899999987753

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=89.69  E-value=0.19  Score=45.87  Aligned_cols=31  Identities=29%  Similarity=0.492  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||..+..
T Consensus       127 ~~i~H~dlkp~nili~~-~~~~~l~dfg~~~~  157 (284)
T cd05081         127 KRYVHRDLATRNILVES-ENRVKIGDFGLTKV  157 (284)
T ss_pred             CCceeccCCHhhEEECC-CCeEEECCCccccc
Confidence            35899999999999976 67899999987764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=89.67  E-value=0.39  Score=44.54  Aligned_cols=32  Identities=25%  Similarity=0.308  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeC---CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++..   ..+.+.|+||..|..
T Consensus       127 ~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867         127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            35899999999999842   246799999998863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=89.63  E-value=0.52  Score=42.90  Aligned_cols=32  Identities=25%  Similarity=0.407  Sum_probs=27.4

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++++||++++ ++.+.++||.++..
T Consensus       119 ~~~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~~~  150 (277)
T cd06641         119 SEKKIHRDIKAANVLLSE-HGEVKLADFGVAGQ  150 (277)
T ss_pred             cCCeecCCCCHHhEEECC-CCCEEEeeccccee
Confidence            457899999999999976 67899999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=89.62  E-value=0.39  Score=43.90  Aligned_cols=30  Identities=23%  Similarity=0.467  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.|.||+++. ++.+.++||.++.
T Consensus       135 ~gi~H~dl~p~ni~i~~-~~~~~l~d~~~~~  164 (286)
T cd06614         135 QNVIHRDIKSDNILLSK-DGSVKLADFGFAA  164 (286)
T ss_pred             CCeeeCCCChhhEEEcC-CCCEEECccchhh
Confidence            56899999999999986 6789999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=89.61  E-value=0.34  Score=41.74  Aligned_cols=32  Identities=25%  Similarity=0.284  Sum_probs=27.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      .++|+|+.+.||+++. ++.+.++||+.+....
T Consensus       118 ~i~h~di~~~ni~v~~-~~~~~l~d~g~~~~~~  149 (225)
T smart00221      118 GIVHRDLKPENILLGM-DGLVKLADFGLARFIH  149 (225)
T ss_pred             CeecCCCCHHHEEEcC-CCCEEEeeCceeeEec
Confidence            8899999999999986 5889999998777543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=89.60  E-value=0.42  Score=43.19  Aligned_cols=30  Identities=20%  Similarity=0.344  Sum_probs=25.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.||+++. .+.+.++||..+.
T Consensus       114 ~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~  143 (257)
T cd05115         114 KNFVHRDLAARNVLLVN-QHYAKISDFGLSK  143 (257)
T ss_pred             cCeeecccchheEEEcC-CCcEEeccCCccc
Confidence            45899999999999976 5779999998765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=89.58  E-value=0.21  Score=44.91  Aligned_cols=30  Identities=27%  Similarity=0.366  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..+.|+|++|.||++++ .+.+.++||..+.
T Consensus       132 ~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~  161 (273)
T cd05035         132 RNFIHRDLAARNCMLRE-DMTVCVADFGLSK  161 (273)
T ss_pred             CCeeccccchheEEECC-CCeEEECCcccee
Confidence            46899999999999976 5789999998765

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=89.57  E-value=0.25  Score=45.85  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.++||.++..
T Consensus       135 ~gi~H~dLkp~Nill~~-~~~~kl~dfg~~~~  165 (296)
T cd06654         135 NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ  165 (296)
T ss_pred             CCcccCCCCHHHEEEcC-CCCEEECccccchh
Confidence            35899999999999976 57899999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=89.55  E-value=0.26  Score=45.82  Aligned_cols=31  Identities=16%  Similarity=0.369  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.||+++. ++.+.++||..+..
T Consensus       134 ~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~~  164 (296)
T cd06655         134 NQVIHRDIKSDNVLLGM-DGSVKLTDFGFCAQ  164 (296)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEccCccchh
Confidence            35789999999999976 67899999987663

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1163|consensus

Probab=89.53  E-value=0.51  Score=44.64  Aligned_cols=38  Identities=26%  Similarity=0.346  Sum_probs=28.8

Q ss_pred             CeeeeecCCCCCCeeee--CCCCeEEEEeeccccCCchhhhHH
Q psy8745          43 PVVFCHNDLLLGNIIYD--ETEDKVTFIDYEYAGVNYQAFDIA   83 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~~n~~~fDiA   83 (317)
                      ...|.|+|++|.|+|..  -..+++++|||-.|.   ..+|+-
T Consensus       129 ~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK---ky~d~~  168 (341)
T KOG1163|consen  129 LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK---KYRDIR  168 (341)
T ss_pred             hhccccccCCccceeeccccccceEEEEeccchh---hhcccc
Confidence            35899999999999984  224689999996554   556654

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=89.52  E-value=0.34  Score=43.60  Aligned_cols=30  Identities=23%  Similarity=0.303  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. .+.+.++||..+.
T Consensus       121 ~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~  150 (260)
T cd05073         121 RNYIHRDLRAANILVSA-SLVCKIADFGLAR  150 (260)
T ss_pred             CCccccccCcceEEEcC-CCcEEECCCccee
Confidence            35799999999999976 6789999998775

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=89.52  E-value=0.17  Score=47.73  Aligned_cols=31  Identities=23%  Similarity=0.357  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.++||..+..
T Consensus       115 ~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~  145 (316)
T cd05619         115 KGIVYRDLKLDNILLDT-DGHIKIADFGMCKE  145 (316)
T ss_pred             CCeEeCCCCHHHEEECC-CCCEEEccCCcceE
Confidence            46899999999999986 67899999987753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=89.50  E-value=0.52  Score=41.76  Aligned_cols=33  Identities=27%  Similarity=0.223  Sum_probs=27.4

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ...++|+|+++.||++++ ++.+.|+||..+...
T Consensus       121 ~~~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~  153 (256)
T cd08530         121 EQKILHRDLKSANILLVA-NDLVKIGDLGISKVL  153 (256)
T ss_pred             hCCcccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence            346799999999999987 678999999877543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=89.46  E-value=0.45  Score=43.41  Aligned_cols=31  Identities=29%  Similarity=0.366  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||++++ .+.+.++||..+..
T Consensus       143 ~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~  173 (283)
T cd05090         143 HFFVHKDLAARNILIGE-QLHVKISDLGLSRE  173 (283)
T ss_pred             cCeehhccccceEEEcC-CCcEEecccccccc
Confidence            35899999999999986 57799999987754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=89.44  E-value=0.37  Score=43.32  Aligned_cols=31  Identities=29%  Similarity=0.353  Sum_probs=25.4

Q ss_pred             eeeeecCCCCCCeeeeCCCC-----eEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETED-----KVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~-----~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||+++. .+     .+.++||.++..
T Consensus       125 ~~i~H~dl~p~nil~~~-~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044         125 MHFIHRDLAARNCLVSE-KGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             CCcccCCCChheEEEec-CCCCCCcceEECCcccccc
Confidence            35899999999999976 33     689999988753

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=89.43  E-value=0.42  Score=42.78  Aligned_cols=32  Identities=19%  Similarity=0.299  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||++++ ++.+.|+||..+...
T Consensus       132 ~~i~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~  163 (275)
T cd06608         132 NKVIHRDIKGQNILLTK-NAEVKLVDFGVSAQL  163 (275)
T ss_pred             CCcccCCCCHHHEEEcc-CCeEEECCCccceec
Confidence            46899999999999986 678999999887643

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=89.43  E-value=0.4  Score=43.11  Aligned_cols=32  Identities=16%  Similarity=0.163  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|+.+.||+++. .+.+.++||..+..
T Consensus       124 ~~~i~H~dl~~~nil~~~-~~~~~l~d~g~~~~  155 (267)
T cd08228         124 SRRVMHRDIKPANVFITA-TGVVKLGDLGLGRF  155 (267)
T ss_pred             hCCeeCCCCCHHHEEEcC-CCCEEECcccccee
Confidence            347899999999999976 57899999987764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=89.41  E-value=0.37  Score=43.25  Aligned_cols=33  Identities=21%  Similarity=0.288  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||+++.++..+.++||..+...
T Consensus       122 ~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630         122 NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            468999999999999764456899999887543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PHA03211 serine/threonine kinase US3; Provisional

Probab=89.41  E-value=0.39  Score=48.68  Aligned_cols=31  Identities=16%  Similarity=0.264  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.|||++. .+.+.|+||..+..
T Consensus       279 ~gIvHrDLKP~NILl~~-~~~vkL~DFGla~~  309 (461)
T PHA03211        279 EGIIHRDIKTENVLVNG-PEDICLGDFGAACF  309 (461)
T ss_pred             CCEEECcCCHHHEEECC-CCCEEEcccCCcee
Confidence            35899999999999976 67899999988753

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=89.41  E-value=0.32  Score=43.51  Aligned_cols=29  Identities=17%  Similarity=0.224  Sum_probs=25.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYA   73 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya   73 (317)
                      ..++|+|++|.||++++ ++.+.++||..+
T Consensus       104 ~~i~H~dlkp~Nil~~~-~~~~~l~df~~~  132 (237)
T cd05576         104 EGIVCRDLNPNNILLDD-RGHIQLTYFSRW  132 (237)
T ss_pred             CCeeccCCCHHHEEEcC-CCCEEEecccch
Confidence            46899999999999986 678999998754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=89.30  E-value=0.58  Score=42.78  Aligned_cols=31  Identities=19%  Similarity=0.243  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||+++.+.+.+.+.||..+.
T Consensus       129 ~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837         129 HGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             CCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            4689999999999998646789999998765

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=89.30  E-value=0.27  Score=45.69  Aligned_cols=31  Identities=23%  Similarity=0.336  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.++||..+..
T Consensus       159 ~gi~H~dlkp~Nill~~-~~~~kL~dfg~a~~  189 (307)
T cd05098         159 KKCIHRDLAARNVLVTE-DNVMKIADFGLARD  189 (307)
T ss_pred             CCcccccccHHheEEcC-CCcEEECCCccccc
Confidence            47899999999999986 57899999987753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=89.23  E-value=0.21  Score=46.41  Aligned_cols=31  Identities=16%  Similarity=0.341  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. .+.+.++||..+..
T Consensus       120 ~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~~  150 (305)
T cd05609         120 YGIVHRDLKPDNLLITS-MGHIKLTDFGLSKI  150 (305)
T ss_pred             CCccccCCchHHEEECC-CCCEEEeeCCCccc
Confidence            35899999999999976 67899999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=89.21  E-value=0.2  Score=45.99  Aligned_cols=30  Identities=20%  Similarity=0.269  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. .+.+.|+||..+.
T Consensus       122 ~~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~  151 (291)
T cd07870         122 QHILHRDLKPQNLLISY-LGELKLADFGLAR  151 (291)
T ss_pred             CCcccCCCChHHEEEcC-CCcEEEecccccc
Confidence            35899999999999976 6789999998775

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=89.21  E-value=0.53  Score=42.56  Aligned_cols=30  Identities=30%  Similarity=0.386  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. .+.+.++||..+.
T Consensus       119 ~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~  148 (269)
T cd05087         119 NNFIHSDLALRNCLLTA-DLTVKIGDYGLSH  148 (269)
T ss_pred             CCEeccccCcceEEEcC-CCcEEECCccccc
Confidence            45899999999999976 6789999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=89.18  E-value=0.45  Score=42.88  Aligned_cols=30  Identities=27%  Similarity=0.377  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.++||..+.
T Consensus       132 ~~i~H~dikp~nili~~-~~~~kl~dfg~~~  161 (273)
T cd05074         132 KNFIHRDLAARNCMLNE-NMTVCVADFGLSK  161 (273)
T ss_pred             CCEeecccchhhEEEcC-CCCEEECcccccc
Confidence            35899999999999976 6789999998766

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=89.16  E-value=0.35  Score=44.26  Aligned_cols=30  Identities=27%  Similarity=0.356  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.++||-++.
T Consensus       149 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~  178 (288)
T cd05050         149 RKFVHRDLATRNCLVGE-NMVVKIADFGLSR  178 (288)
T ss_pred             CCeecccccHhheEecC-CCceEECccccce
Confidence            47999999999999976 6789999997764

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=89.15  E-value=0.44  Score=44.14  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++ .+.+.++||..+.
T Consensus       156 ~givH~dlkp~Nili~~-~~~~kl~D~g~~~  185 (304)
T cd05101         156 QKCIHRDLAARNVLVTE-NNVMKIADFGLAR  185 (304)
T ss_pred             CCeeecccccceEEEcC-CCcEEECCCccce
Confidence            36899999999999976 5789999998775

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=89.15  E-value=0.2  Score=46.13  Aligned_cols=31  Identities=23%  Similarity=0.194  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ .+.+.++||..+..
T Consensus       121 ~~ivH~dlkp~Nil~~~-~~~~~l~Dfg~~~~  151 (285)
T cd05605         121 ERIVYRDLKPENILLDD-YGHIRISDLGLAVE  151 (285)
T ss_pred             CCcEecCCCHHHEEECC-CCCEEEeeCCCcee
Confidence            35899999999999976 57899999987764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=89.14  E-value=0.33  Score=45.64  Aligned_cols=31  Identities=23%  Similarity=0.345  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.|+||.++..
T Consensus       115 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~  145 (318)
T cd05570         115 RGIIYRDLKLDNVLLDS-EGHIKIADFGMCKE  145 (318)
T ss_pred             CCeEccCCCHHHeEECC-CCcEEecccCCCee
Confidence            46899999999999986 67899999988753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=89.11  E-value=0.37  Score=43.22  Aligned_cols=31  Identities=26%  Similarity=0.365  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.++||..+..
T Consensus       122 ~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~  152 (261)
T cd05072         122 KNYIHRDLRAANVLVSE-SLMCKIADFGLARV  152 (261)
T ss_pred             CCeeccccchhhEEecC-CCcEEECCCcccee
Confidence            35799999999999986 57899999998864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=89.09  E-value=0.37  Score=44.14  Aligned_cols=30  Identities=20%  Similarity=0.382  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.+.||.++.
T Consensus       149 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~  178 (296)
T cd05051         149 LNFVHRDLATRNCLVGK-NYTIKIADFGMSR  178 (296)
T ss_pred             cCccccccchhceeecC-CCceEEcccccee
Confidence            45799999999999986 5789999998765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=89.07  E-value=0.41  Score=42.97  Aligned_cols=32  Identities=22%  Similarity=0.300  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+...
T Consensus       112 ~~~~h~dl~~~nilv~~-~~~~~l~df~~~~~~  143 (262)
T cd05572         112 RGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKL  143 (262)
T ss_pred             CCcccCCCCHHHEEEcC-CCCEEEeeCCccccc
Confidence            56899999999999976 678999999887643

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=89.04  E-value=0.16  Score=45.84  Aligned_cols=30  Identities=20%  Similarity=0.393  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||++++ ++.+.++||..+..
T Consensus       131 ~ivh~dl~~~nili~~-~~~~~l~Dfg~~~~  160 (272)
T cd06637         131 KVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ  160 (272)
T ss_pred             CCccCCCCHHHEEECC-CCCEEEccCCCcee
Confidence            5899999999999986 57899999988753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=89.00  E-value=0.46  Score=42.67  Aligned_cols=32  Identities=25%  Similarity=0.299  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.||++++ ++.+.++||..+...
T Consensus       121 ~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~~  152 (260)
T cd05067         121 KNYIHRDLRAANILVSE-TLCCKIADFGLARLI  152 (260)
T ss_pred             CCeecccccHHhEEEcC-CCCEEEccCcceeec
Confidence            45899999999999986 578999999888653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=88.99  E-value=0.58  Score=42.43  Aligned_cols=33  Identities=21%  Similarity=0.306  Sum_probs=28.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ..++|+|+.+.||++++ ++.+.|+||..+..-.
T Consensus       119 ~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~~~  151 (288)
T cd07833         119 HNIIHRDIKPENILVSE-SGVLKLCDFGFARALR  151 (288)
T ss_pred             CCeecCCCCHHHeEECC-CCCEEEEeeecccccC
Confidence            35899999999999986 6889999998877543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=88.94  E-value=0.43  Score=43.16  Aligned_cols=31  Identities=26%  Similarity=0.325  Sum_probs=26.4

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...++|+|+.|.||++++ ++.+.++||.++.
T Consensus       137 ~~~i~H~di~p~nill~~-~~~~kl~dfg~~~  167 (277)
T cd05032         137 AKKFVHRDLAARNCMVAE-DLTVKIGDFGMTR  167 (277)
T ss_pred             hCCccccccChheEEEcC-CCCEEECCcccch
Confidence            346899999999999986 6789999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=88.90  E-value=0.67  Score=44.99  Aligned_cols=30  Identities=17%  Similarity=0.265  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ .+.+.|+||..+.
T Consensus       231 ~giiHrDLkp~Nil~~~-~~~~kL~DfGla~  260 (374)
T cd05106         231 KNCIHRDVAARNVLLTD-GRVAKICDFGLAR  260 (374)
T ss_pred             CCEEeccCchheEEEeC-CCeEEEeeceeee
Confidence            35799999999999986 5789999998765

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=88.89  E-value=0.23  Score=44.56  Aligned_cols=30  Identities=33%  Similarity=0.420  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ .+.+.++||..+.
T Consensus       117 ~~i~H~dlk~~nili~~-~~~~kl~dfg~~~  146 (262)
T cd05058         117 KKFVHRDLAARNCMLDE-SFTVKVADFGLAR  146 (262)
T ss_pred             CCccccccCcceEEEcC-CCcEEECCccccc
Confidence            46899999999999976 5779999998775

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=88.88  E-value=0.46  Score=45.28  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       137 ~gi~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~  167 (353)
T cd07850         137 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART  167 (353)
T ss_pred             CCeeeCCCCHHHEEECC-CCCEEEccCcccee
Confidence            36899999999999986 67899999988764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0598|consensus

Probab=88.88  E-value=0.34  Score=47.51  Aligned_cols=39  Identities=21%  Similarity=0.272  Sum_probs=31.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHH
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIA   83 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiA   83 (317)
                      ..+.|+||+|.|||+|. +|.|.|=||-.|..+--.=|-.
T Consensus       144 ~gIiyRDlKPENILLd~-~GHi~LtDFgL~k~~~~~~~~t  182 (357)
T KOG0598|consen  144 KGIIYRDLKPENILLDE-QGHIKLTDFGLCKEDLKDGDAT  182 (357)
T ss_pred             CCeeeccCCHHHeeecC-CCcEEEeccccchhcccCCCcc
Confidence            67899999999999987 7999999998777544443333

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=88.86  E-value=0.42  Score=43.78  Aligned_cols=30  Identities=30%  Similarity=0.310  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+.
T Consensus       116 ~~i~H~di~p~nili~~-~~~~kl~dfg~~~  145 (278)
T cd05606         116 RFVVYRDLKPANILLDE-HGHVRISDLGLAC  145 (278)
T ss_pred             CCEEcCCCCHHHEEECC-CCCEEEccCcCcc
Confidence            45899999999999976 5789999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=88.82  E-value=0.71  Score=41.66  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||++++ ++.+.++||..+...
T Consensus       127 ~~i~H~dl~~~nil~~~-~~~~~l~d~~~~~~~  158 (272)
T cd06629         127 KGILHRDLKADNLLVDA-DGICKISDFGISKKS  158 (272)
T ss_pred             CCeeecCCChhhEEEcC-CCeEEEeeccccccc
Confidence            46899999999999986 688999999888653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=88.81  E-value=0.43  Score=43.73  Aligned_cols=31  Identities=23%  Similarity=0.347  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.++||..+..
T Consensus       147 ~~ivH~dlkp~nili~~-~~~~kl~dfg~~~~  177 (291)
T cd06639         147 NRIIHRDVKGNNILLTT-EGGVKLVDFGVSAQ  177 (291)
T ss_pred             CCeeccCCCHHHEEEcC-CCCEEEeecccchh
Confidence            46899999999999976 67899999987763

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=88.81  E-value=0.4  Score=42.80  Aligned_cols=32  Identities=25%  Similarity=0.394  Sum_probs=26.8

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|+.+.||++++ ++.+.|+||.++..
T Consensus       120 ~~~i~h~~l~p~ni~~~~-~~~~~l~df~~~~~  151 (267)
T cd06610         120 SNGQIHRDIKAGNILLGE-DGSVKIADFGVSAS  151 (267)
T ss_pred             hCCeecCCCCHHhEEEcC-CCCEEEcccchHHH
Confidence            346899999999999986 57899999987653

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=88.79  E-value=0.3  Score=44.53  Aligned_cols=31  Identities=23%  Similarity=0.460  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+.|+|+++.||+++. .+.+.++||..+..
T Consensus       122 ~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~  152 (282)
T cd06643         122 NKIIHRDLKAGNILFTL-DGDIKLADFGVSAK  152 (282)
T ss_pred             CCeeecCCCcccEEEcc-CCCEEEcccccccc
Confidence            46899999999999976 67899999987754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=88.78  E-value=0.42  Score=45.55  Aligned_cols=31  Identities=26%  Similarity=0.428  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||++++ ++.+.++||..+..
T Consensus       137 ~gi~H~dlkp~Nill~~-~~~~kl~dfg~~~~  167 (343)
T cd07880         137 AGIIHRDLKPGNLAVNE-DCELKILDFGLARQ  167 (343)
T ss_pred             CCeecCCCCHHHEEEcC-CCCEEEeecccccc
Confidence            45899999999999986 67899999987763

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=88.77  E-value=0.5  Score=43.34  Aligned_cols=29  Identities=21%  Similarity=0.369  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|+.+.||++++ ++.+.++||.++.
T Consensus       126 ~i~H~dl~p~nili~~-~~~~~l~d~g~~~  154 (293)
T cd07843         126 WILHRDLKTSNLLLNN-RGILKICDFGLAR  154 (293)
T ss_pred             CeeeccCCHHHEEECC-CCcEEEeecCcee
Confidence            5899999999999986 6889999998765

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=88.77  E-value=0.33  Score=43.15  Aligned_cols=32  Identities=19%  Similarity=0.167  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||+++++...+.++||.++..
T Consensus       120 ~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~  151 (257)
T cd08225         120 RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQ  151 (257)
T ss_pred             CCcccccCCHHHEEEcCCCCeEEecccccchh
Confidence            46899999999999986444578999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=88.69  E-value=0.39  Score=45.40  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||++++ .+.+.++||..+..
T Consensus       126 ~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~  155 (336)
T cd07849         126 NVLHRDLKPSNLLLNT-NCDLKICDFGLARI  155 (336)
T ss_pred             CeeccCCCHHHEEECC-CCCEEECcccceee
Confidence            5899999999999976 67899999987754

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=88.65  E-value=0.35  Score=43.88  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       120 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~  150 (285)
T cd07861         120 RRVLHRDLKPQNLLIDN-KGVIKLADFGLARA  150 (285)
T ss_pred             CCeeecCCCHHHEEEcC-CCcEEECcccceee
Confidence            46899999999999976 67899999988753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=88.62  E-value=0.66  Score=41.95  Aligned_cols=30  Identities=27%  Similarity=0.443  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||++++ ++.+.|+||..+..
T Consensus       127 ~i~h~~l~~~nili~~-~~~~~l~dfg~~~~  156 (287)
T cd07838         127 RIVHRDLKPQNILVTS-DGQVKIADFGLARI  156 (287)
T ss_pred             CeeeccCChhhEEEcc-CCCEEEeccCccee
Confidence            5899999999999987 58899999987754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=88.60  E-value=0.29  Score=45.83  Aligned_cols=31  Identities=29%  Similarity=0.500  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||.+.||+++. ++.+.++||..+..
T Consensus       144 ~~i~H~dL~p~Nil~~~-~~~~kl~dfg~~~~  174 (317)
T cd06635         144 HNMIHRDIKAGNILLTE-PGQVKLADFGSASI  174 (317)
T ss_pred             CCcccCCCCcccEEECC-CCCEEEecCCCccc
Confidence            45799999999999976 67899999987754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=88.59  E-value=0.4  Score=43.54  Aligned_cols=31  Identities=23%  Similarity=0.372  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+..
T Consensus       119 ~~i~h~~l~p~ni~~~~-~~~~~l~dfg~~~~  149 (286)
T cd07846         119 HNIIHRDIKPENILVSQ-SGVVKLCDFGFART  149 (286)
T ss_pred             CCccccCCCHHHEEECC-CCcEEEEeeeeeee
Confidence            46899999999999976 67899999987764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=88.54  E-value=0.25  Score=45.14  Aligned_cols=30  Identities=17%  Similarity=0.366  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||++.||+++. ++.+.|+||..+.
T Consensus       114 ~~i~H~dlkp~Nill~~-~~~~~l~dfg~~~  143 (279)
T cd06619         114 LKILHRDVKPSNMLVNT-RGQVKLCDFGVST  143 (279)
T ss_pred             CCEeeCCCCHHHEEECC-CCCEEEeeCCcce
Confidence            46899999999999986 6889999998775

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=88.52  E-value=0.21  Score=44.99  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.++||++++ .+.+.++||..+..
T Consensus       125 ~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~  155 (267)
T cd06646         125 KGKMHRDIKGANILLTD-NGDVKLADFGVAAK  155 (267)
T ss_pred             CCccccCCCHHHEEECC-CCCEEECcCcccee
Confidence            46899999999999976 57799999998863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=88.48  E-value=0.31  Score=44.24  Aligned_cols=29  Identities=31%  Similarity=0.374  Sum_probs=25.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|+++.|||++. ++.+.++||..+.
T Consensus       119 ~i~H~dikp~nil~~~-~~~~~l~Dfg~~~  147 (268)
T cd05086         119 NFLHSDLALRNCFLTS-DLTVKVGDYGIGP  147 (268)
T ss_pred             CeeccCCccceEEEcC-CccEEeccccccc
Confidence            4799999999999976 5789999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=88.43  E-value=0.55  Score=42.19  Aligned_cols=30  Identities=20%  Similarity=0.331  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+.|.||++++ .+.+.++||..+..
T Consensus       122 ~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~  151 (265)
T cd06631         122 CVVHRDIKGNNVMLMP-NGIIKLIDFGCARR  151 (265)
T ss_pred             CcccCCcCHHhEEECC-CCeEEeccchhhHh
Confidence            4789999999999976 68899999987663

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=88.42  E-value=0.23  Score=44.60  Aligned_cols=31  Identities=16%  Similarity=0.164  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.++||..+..
T Consensus       125 ~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~  155 (267)
T cd08229         125 RRVMHRDIKPANVFITA-TGVVKLGDLGLGRF  155 (267)
T ss_pred             CCeecCCCCHHHEEEcC-CCCEEECcchhhhc
Confidence            46899999999999976 67899999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=88.42  E-value=0.26  Score=45.49  Aligned_cols=31  Identities=23%  Similarity=0.227  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ .+.+.++||..+..
T Consensus       121 ~~iiH~dikp~Nil~~~-~~~~~l~Dfg~~~~  151 (285)
T cd05630         121 ERIVYRDLKPENILLDD-HGHIRISDLGLAVH  151 (285)
T ss_pred             CCEEeCCCCHHHEEECC-CCCEEEeeccceee
Confidence            46889999999999986 57899999987753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=88.32  E-value=0.51  Score=42.76  Aligned_cols=32  Identities=19%  Similarity=0.372  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..+.|+|+++.||++++ ++.+.++||.++..-
T Consensus       119 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~  150 (286)
T cd07847         119 HNCIHRDVKPENILITK-QGQIKLCDFGFARIL  150 (286)
T ss_pred             CCceecCCChhhEEEcC-CCcEEECccccceec
Confidence            45789999999999976 578999999887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=88.30  E-value=0.29  Score=43.83  Aligned_cols=31  Identities=16%  Similarity=0.177  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||+++. ++.+.++||..+..
T Consensus       125 ~~i~h~dl~p~nil~~~-~~~~~l~d~~~~~~  155 (267)
T cd08224         125 KRIMHRDIKPANVFITA-TGVVKLGDLGLGRF  155 (267)
T ss_pred             CCEecCCcChhhEEECC-CCcEEEeccceeee
Confidence            47899999999999976 67899999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=88.24  E-value=0.38  Score=44.69  Aligned_cols=30  Identities=17%  Similarity=0.405  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.++||.++.
T Consensus       135 ~givH~dl~p~Nilv~~-~~~~~l~dfg~~~  164 (292)
T cd06657         135 QGVIHRDIKSDSILLTH-DGRVKLSDFGFCA  164 (292)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEcccccce
Confidence            35899999999999986 5789999999765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=88.20  E-value=0.44  Score=43.21  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ .+.+.++||.++.
T Consensus       119 ~~i~h~dl~p~ni~~~~-~~~~~l~d~g~~~  148 (284)
T cd07836         119 NRVLHRDLKPQNLLINK-RGELKLADFGLAR  148 (284)
T ss_pred             CCeeeCCCCHHHEEECC-CCcEEEeecchhh
Confidence            46899999999999976 6789999998774

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=88.18  E-value=0.51  Score=43.72  Aligned_cols=29  Identities=14%  Similarity=0.430  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|+.+.||++++ ++.+.++||..+.
T Consensus       138 ~ivH~dlkp~Nill~~-~~~~kL~dfg~~~  166 (292)
T cd06658         138 GVIHRDIKSDSILLTS-DGRIKLSDFGFCA  166 (292)
T ss_pred             CEeecCCCHHHEEEcC-CCCEEEccCcchh
Confidence            5789999999999976 5789999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=88.16  E-value=0.57  Score=41.78  Aligned_cols=31  Identities=23%  Similarity=0.336  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++. ++.+.++||.++..
T Consensus       120 ~~i~h~~l~~~nil~~~-~~~~~l~d~~~~~~  150 (256)
T cd08218         120 RKILHRDIKSQNIFLTK-DGTIKLGDFGIARV  150 (256)
T ss_pred             CCEecCCCCHHHEEEcC-CCCEEEeeccceee
Confidence            46899999999999976 67899999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=88.15  E-value=0.21  Score=45.68  Aligned_cols=30  Identities=23%  Similarity=0.359  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+.
T Consensus       122 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~  151 (291)
T cd07844         122 RRVLHRDLKPQNLLISE-RGELKLADFGLAR  151 (291)
T ss_pred             CCeecccCCHHHEEEcC-CCCEEECcccccc
Confidence            35899999999999976 6789999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=88.12  E-value=0.55  Score=42.77  Aligned_cols=30  Identities=27%  Similarity=0.453  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.|+||++++ .+.+.++||..+.
T Consensus       120 ~~ivH~dl~p~Nil~~~-~~~~~l~dfg~~~  149 (277)
T cd06640         120 EKKIHRDIKAANVLLSE-QGDVKLADFGVAG  149 (277)
T ss_pred             CCccCcCCChhhEEEcC-CCCEEEcccccce
Confidence            46789999999999986 6789999998775

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=88.08  E-value=0.31  Score=43.34  Aligned_cols=31  Identities=29%  Similarity=0.494  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ .+.+.|.||..+..
T Consensus       118 ~~i~H~dl~~~ni~~~~-~~~~~l~dfg~~~~  148 (256)
T cd06612         118 NKKIHRDIKAGNILLNE-EGQAKLADFGVSGQ  148 (256)
T ss_pred             CCcccCCCCcceEEECC-CCcEEEcccccchh
Confidence            35799999999999986 57899999987664

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=88.08  E-value=0.3  Score=46.07  Aligned_cols=30  Identities=23%  Similarity=0.381  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.|.||++++ ++.+.|+||.++.
T Consensus       153 ~givH~dlkp~Nill~~-~~~~kL~Dfg~~~  182 (334)
T cd05100         153 QKCIHRDLAARNVLVTE-DNVMKIADFGLAR  182 (334)
T ss_pred             CCeeccccccceEEEcC-CCcEEECCcccce
Confidence            46899999999999976 5789999998775

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=88.07  E-value=0.23  Score=44.77  Aligned_cols=29  Identities=21%  Similarity=0.339  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++. .+.+.++||..+.
T Consensus       126 ~i~H~dlkp~nili~~-~~~~~l~dfg~~~  154 (267)
T cd06645         126 GKMHRDIKGANILLTD-NGHVKLADFGVSA  154 (267)
T ss_pred             CeecCCCCHHHEEECC-CCCEEECcceeee
Confidence            5899999999999976 6789999998765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=88.06  E-value=0.3  Score=45.35  Aligned_cols=31  Identities=23%  Similarity=0.402  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ .+.+.|+||..+..
T Consensus       128 ~~ivH~dikp~Nill~~-~~~~kL~Dfg~~~~  158 (303)
T cd05110         128 RRLVHRDLAARNVLVKS-PNHVKITDFGLARL  158 (303)
T ss_pred             cCeeccccccceeeecC-CCceEEcccccccc
Confidence            45799999999999975 57899999987764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=88.02  E-value=0.46  Score=43.16  Aligned_cols=30  Identities=27%  Similarity=0.388  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||+++. .+.+.++||..+.
T Consensus       118 ~~~~H~dl~p~nil~~~-~~~~~l~df~~~~  147 (283)
T cd07835         118 HRVLHRDLKPQNLLIDR-EGALKLADFGLAR  147 (283)
T ss_pred             CCeeCCCCCHHHEEEcC-CCcEEEeeccccc
Confidence            46899999999999987 6889999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=88.01  E-value=0.4  Score=45.69  Aligned_cols=32  Identities=28%  Similarity=0.349  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++|.||++++ .+.+.++||..+..
T Consensus       197 ~~~i~H~dikp~Nil~~~-~~~~kl~dfg~~~~  228 (343)
T cd05103         197 SRKCIHRDLAARNILLSE-NNVVKICDFGLARD  228 (343)
T ss_pred             hCCeecCCCccCeEEEcC-CCcEEEEecccccc
Confidence            357899999999999986 67899999987753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=88.01  E-value=0.44  Score=43.16  Aligned_cols=31  Identities=26%  Similarity=0.413  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||++++ .+.+.++||.++..
T Consensus       120 ~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~  150 (277)
T cd06917         120 VGVIHRDIKAANILVTN-TGNVKLCDFGVAAL  150 (277)
T ss_pred             CCcccCCcCHHHEEEcC-CCCEEEccCCceee
Confidence            46899999999999986 68899999987753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=88.00  E-value=0.29  Score=49.86  Aligned_cols=30  Identities=20%  Similarity=0.318  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.|+||-.+.
T Consensus       162 ~~IiHrDLKP~NILl~~-~~~vkL~DFGls~  191 (496)
T PTZ00283        162 KHMIHRDIKSANILLCS-NGLVKLGDFGFSK  191 (496)
T ss_pred             CCEecCCCCHHHEEEeC-CCCEEEEecccCe
Confidence            35799999999999986 6789999998653

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=87.96  E-value=0.66  Score=41.58  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||.|.||++++ .+.+.++||..+..
T Consensus       116 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~  146 (260)
T cd05611         116 RGIIHRDIKPENLLIDQ-TGHLKLTDFGLSRN  146 (260)
T ss_pred             CCeecCCCCHHHeEECC-CCcEEEeeccccee
Confidence            35899999999999976 67899999987653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=87.93  E-value=0.56  Score=42.33  Aligned_cols=30  Identities=23%  Similarity=0.341  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.|.||..+.
T Consensus       125 ~~i~H~~l~p~nil~~~-~~~~~l~dfg~~~  154 (266)
T cd06651         125 NMIVHRDIKGANILRDS-AGNVKLGDFGASK  154 (266)
T ss_pred             CCeeeCCCCHHHEEECC-CCCEEEccCCCcc
Confidence            45899999999999976 5789999998775

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=87.84  E-value=0.54  Score=43.68  Aligned_cols=30  Identities=17%  Similarity=0.369  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||+++. ++.+.|+||..+.
T Consensus       136 ~~ivH~dl~p~Nill~~-~~~~kL~dfg~~~  165 (297)
T cd06659         136 QGVIHRDIKSDSILLTL-DGRVKLSDFGFCA  165 (297)
T ss_pred             CCeecCCCCHHHeEEcc-CCcEEEeechhHh
Confidence            45899999999999976 6789999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=87.84  E-value=0.6  Score=49.40  Aligned_cols=30  Identities=23%  Similarity=0.428  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. .+.+.|+||..+..
T Consensus       124 gIiHrDLKP~NILl~~-~g~vkL~DFGls~~  153 (669)
T cd05610         124 GIIHRDLKPDNMLISN-EGHIKLTDFGLSKV  153 (669)
T ss_pred             CEEeCCccHHHEEEcC-CCCEEEEeCCCCcc
Confidence            6899999999999976 67899999998864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=87.69  E-value=0.51  Score=42.50  Aligned_cols=30  Identities=20%  Similarity=0.375  Sum_probs=25.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++ ++.+.++||.++.
T Consensus       126 ~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~  155 (268)
T cd05063         126 MNYVHRDLAARNILVNS-NLECKVSDFGLSR  155 (268)
T ss_pred             CCeeccccchhhEEEcC-CCcEEECCCccce
Confidence            35899999999999976 6789999997765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=87.68  E-value=0.3  Score=45.54  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.++||..+.
T Consensus       160 ~~ivH~dlkp~Nil~~~-~~~~~l~dfg~~~  189 (302)
T cd05055         160 KNCIHRDLAARNVLLTH-GKIVKICDFGLAR  189 (302)
T ss_pred             CCeehhhhccceEEEcC-CCeEEECCCcccc
Confidence            35899999999999975 5778999998775

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=87.58  E-value=0.38  Score=42.25  Aligned_cols=34  Identities=24%  Similarity=0.249  Sum_probs=28.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      ..++|+|+.+.||++++ ++.+.++||.++.....
T Consensus       120 ~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~  153 (260)
T cd06606         120 NGIVHRDIKGANILVDS-DGVVKLADFGCAKRLGD  153 (260)
T ss_pred             CCccccCCCHHHEEEcC-CCCEEEcccccEEeccc
Confidence            57899999999999986 68899999988775443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=87.51  E-value=0.3  Score=44.82  Aligned_cols=30  Identities=23%  Similarity=0.292  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.++||..+.
T Consensus       138 ~~i~H~dikp~nili~~-~~~~~L~Dfg~~~  167 (288)
T cd05061         138 KKFVHRDLAARNCMVAH-DFTVKIGDFGMTR  167 (288)
T ss_pred             CCCcCCCCChheEEEcC-CCcEEECcCCccc
Confidence            46899999999999986 6789999998765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=87.47  E-value=0.27  Score=44.74  Aligned_cols=31  Identities=19%  Similarity=0.359  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ .+.+.++||.++..
T Consensus       140 ~~ivH~dl~~~nili~~-~~~~~l~dfg~~~~  170 (282)
T cd06636         140 HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ  170 (282)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEeeCcchhh
Confidence            46899999999999986 67899999987663

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=87.43  E-value=0.3  Score=44.79  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+.
T Consensus       146 ~~ivH~dikp~nill~~-~~~~kl~dfg~~~  175 (290)
T cd05045         146 MKLVHRDLAARNVLVAE-GRKMKISDFGLSR  175 (290)
T ss_pred             CCeehhhhhhheEEEcC-CCcEEeccccccc
Confidence            46899999999999976 6789999997765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=87.40  E-value=0.55  Score=42.19  Aligned_cols=30  Identities=20%  Similarity=0.317  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.|.||++++ .+.+.+.||.++.
T Consensus       125 ~~ivH~di~p~nil~~~-~~~~~l~dfg~~~  154 (267)
T cd06628         125 RGIIHRDIKGANILVDN-KGGIKISDFGISK  154 (267)
T ss_pred             cCcccccCCHHHEEEcC-CCCEEecccCCCc
Confidence            35799999999999976 6789999998775

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=87.28  E-value=0.29  Score=46.58  Aligned_cols=31  Identities=26%  Similarity=0.423  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++. ++.+.|+||..+..
T Consensus       136 ~~i~H~dlkp~NIll~~-~~~~kL~dfg~~~~  166 (342)
T cd07879         136 AGIIHRDLKPGNLAVNE-DCELKILDFGLARH  166 (342)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEeeCCCCcC
Confidence            35799999999999986 68899999988764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=87.26  E-value=0.51  Score=43.12  Aligned_cols=30  Identities=23%  Similarity=0.300  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.|.||++++ ++.+.++||..+.
T Consensus       141 ~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~  170 (280)
T cd05092         141 LHFVHRDLATRNCLVGQ-GLVVKIGDFGMSR  170 (280)
T ss_pred             CCeecccccHhhEEEcC-CCCEEECCCCcee
Confidence            46899999999999976 6789999998775

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=87.25  E-value=0.24  Score=45.14  Aligned_cols=30  Identities=23%  Similarity=0.251  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+.
T Consensus       114 ~~i~H~di~p~Nil~~~-~~~~~l~dfg~~~  143 (277)
T cd05577         114 RRIVYRDLKPENVLLDD-HGNVRISDLGLAV  143 (277)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEccCcchh
Confidence            46799999999999976 6789999998765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=87.23  E-value=0.45  Score=42.93  Aligned_cols=32  Identities=19%  Similarity=0.273  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||++++ ++.+.+.||..+..-
T Consensus       119 ~~~~h~dl~p~nil~~~-~~~~~l~d~g~~~~~  150 (287)
T cd07840         119 NGILHRDIKGSNILINN-DGVLKLADFGLARPY  150 (287)
T ss_pred             CCceeccCcHHHeEEcC-CCCEEEccccceeec
Confidence            35899999999999986 678999999877643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=87.18  E-value=0.36  Score=45.60  Aligned_cols=30  Identities=27%  Similarity=0.388  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+.
T Consensus       126 ~~i~H~dl~p~nill~~-~~~~kl~d~g~~~  155 (337)
T cd07852         126 GNVIHRDLKPSNILLNS-DCRVKLADFGLAR  155 (337)
T ss_pred             CCeecCCCCHHHEEEcC-CCcEEEeeccchh
Confidence            46899999999999986 6789999998665

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=87.17  E-value=0.85  Score=41.20  Aligned_cols=30  Identities=20%  Similarity=0.251  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. .+.+.+.||+++.
T Consensus       136 ~~i~H~dlkp~Nili~~-~~~~~l~~~~~~~  165 (275)
T cd05046         136 ARFVHRDLAARNCLVSS-QREVKVSLLSLSK  165 (275)
T ss_pred             cCcccCcCccceEEEeC-CCcEEEccccccc
Confidence            35899999999999976 5778899998775

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=87.17  E-value=0.51  Score=43.33  Aligned_cols=30  Identities=20%  Similarity=0.381  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+.+.||+++. ++.+.+.||..+..
T Consensus       139 ~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~  168 (310)
T cd07865         139 KILHRDMKAANILITK-DGILKLADFGLARA  168 (310)
T ss_pred             CeeccCCCHHHEEECC-CCcEEECcCCCccc
Confidence            6899999999999976 67899999988763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=87.17  E-value=0.48  Score=44.03  Aligned_cols=32  Identities=28%  Similarity=0.387  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.|.||++++ ++.+.+.||..+...
T Consensus       134 ~~i~H~dl~p~nIl~~~-~~~~kL~dfg~~~~~  165 (307)
T cd06607         134 HERIHRDIKAGNILLTE-PGTVKLADFGSASLV  165 (307)
T ss_pred             CCceecCCCcccEEECC-CCCEEEeecCcceec
Confidence            35799999999999976 678999999987654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=87.16  E-value=0.41  Score=44.81  Aligned_cols=31  Identities=29%  Similarity=0.448  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.|.||++++ ++.+.++||..+..
T Consensus       140 ~gi~H~dl~p~nili~~-~~~~kL~dfg~~~~  170 (313)
T cd06633         140 HNMIHRDIKAGNILLTE-PGQVKLADFGSASK  170 (313)
T ss_pred             CCeecCCCChhhEEECC-CCCEEEeecCCCcc
Confidence            35899999999999976 67899999988753

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=87.08  E-value=0.7  Score=43.75  Aligned_cols=31  Identities=26%  Similarity=0.400  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ .+.+.++||..+..
T Consensus       127 ~~iiH~dl~p~Nili~~-~~~~~l~dfg~~~~  157 (328)
T cd07856         127 AGVVHRDLKPSNILINE-NCDLKICDFGLARI  157 (328)
T ss_pred             CCcccCCCCHHHEeECC-CCCEEeCccccccc
Confidence            45899999999999976 67899999988763

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0198|consensus

Probab=87.04  E-value=0.84  Score=44.25  Aligned_cols=33  Identities=24%  Similarity=0.358  Sum_probs=27.5

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...+.|+|+++.|||++..++.+.+-||--+.-
T Consensus       135 s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~  167 (313)
T KOG0198|consen  135 SKGIVHCDIKPANILLDPSNGDVKLADFGLAKK  167 (313)
T ss_pred             hCCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence            568999999999999986447899999976653

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=87.03  E-value=0.69  Score=43.65  Aligned_cols=30  Identities=23%  Similarity=0.346  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++ ++.+.+.||..+.
T Consensus       126 ~~ivH~dlkp~Nil~~~-~~~~kl~dfg~~~  155 (334)
T cd07855         126 ANVIHRDLKPSNLLVNE-DCELRIGDFGMAR  155 (334)
T ss_pred             CCeecCCCCHHHEEEcC-CCcEEecccccce
Confidence            35899999999999986 6889999998764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0610|consensus

Probab=86.97  E-value=0.83  Score=45.86  Aligned_cols=45  Identities=16%  Similarity=0.160  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          27 QSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        27 ~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .+|+-...++|..    ..+.=+||+|.|||+.+ +|.|+|.|||.+...
T Consensus       185 aAEvl~ALEYLHm----lGivYRDLKPENILvre-dGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  185 AAEVLLALEYLHM----LGIVYRDLKPENILVRE-DGHIMLSDFDLSLRC  229 (459)
T ss_pred             HHHHHHHHHHHHh----hceeeccCCcceeEEec-CCcEEeeeccccccC
Confidence            3444444445544    67889999999999987 699999999988754

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=86.95  E-value=0.67  Score=43.78  Aligned_cols=34  Identities=12%  Similarity=0.237  Sum_probs=27.6

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      ++.+||+|+++...   ++.....+++.||+||....
T Consensus       100 ~l~e~i~G~~~~~~---~~~~~~~~G~~LA~lH~~~~  133 (307)
T TIGR00938       100 CLVEFLQGLSVGRP---TAMHCRPVGEVLAWMHLAGA  133 (307)
T ss_pred             EEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHhhhc
Confidence            58899999988643   45567899999999998654

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=86.81  E-value=0.72  Score=41.79  Aligned_cols=30  Identities=27%  Similarity=0.371  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ .+.+.|.||..+.
T Consensus       118 ~~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~  147 (283)
T cd07830         118 HGFFHRDLKPENLLVSG-PEVVKIADFGLAR  147 (283)
T ss_pred             CCcccCCCChhhEEEcC-CCCEEEeecccce
Confidence            46899999999999986 6889999998765

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG1006|consensus

Probab=86.79  E-value=0.22  Score=47.56  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=28.5

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...-+.|+|++|.|||++. .|.|.|-||--||.
T Consensus       185 ~~lkiIHRDvKPSNILldr-~G~vKLCDFGIcGq  217 (361)
T KOG1006|consen  185 EELKIIHRDVKPSNILLDR-HGDVKLCDFGICGQ  217 (361)
T ss_pred             HHhhhhhccCChhheEEec-CCCEeeecccchHh
Confidence            3467799999999999986 68999999988874

>KOG1166|consensus

Probab=86.73  E-value=0.84  Score=50.42  Aligned_cols=30  Identities=17%  Similarity=0.327  Sum_probs=23.8

Q ss_pred             eeeeecCCCCCCeeeeC------CCCeEEEEeeccc
Q psy8745          44 VVFCHNDLLLGNIIYDE------TEDKVTFIDYEYA   73 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~------~~~~l~lIDfEya   73 (317)
                      ..+.|+||+|.|+|+..      ....|+||||-++
T Consensus       813 ~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s  848 (974)
T KOG1166|consen  813 MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS  848 (974)
T ss_pred             cceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence            57899999999999831      2357999999654

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=86.65  E-value=0.57  Score=43.68  Aligned_cols=31  Identities=29%  Similarity=0.416  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++. ++.+.++||.++..
T Consensus       134 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~  164 (308)
T cd06634         134 HNMIHRDVKAGNILLSE-PGLVKLGDFGSASI  164 (308)
T ss_pred             CCcccCCCCHHhEEECC-CCcEEECCccccee
Confidence            46899999999999976 67899999988764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0612|consensus

Probab=86.58  E-value=0.67  Score=51.65  Aligned_cols=55  Identities=16%  Similarity=0.385  Sum_probs=37.0

Q ss_pred             hhhhhcCCCCHHHHH-HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745          13 SRFQALFPGGVSQLQ-SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYA   73 (317)
Q Consensus        13 ~~~~~~~p~~~~~L~-~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya   73 (317)
                      +++. .+|.+++..- +|+-..-+.+    ...++.|+|++|.|||+|. .|.|.|=||-.|
T Consensus       167 Sk~~-~~pE~~ArFY~aEiVlAldsl----H~mgyVHRDiKPDNvLld~-~GHikLADFGsC  222 (1317)
T KOG0612|consen  167 SKFD-RLPEDWARFYTAEIVLALDSL----HSMGYVHRDIKPDNVLLDK-SGHIKLADFGSC  222 (1317)
T ss_pred             hhcC-CChHHHHHHHHHHHHHHHHHH----HhccceeccCCcceeEecc-cCcEeeccchhH
Confidence            5565 7774444322 2332222222    3579999999999999986 789999999655

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=86.58  E-value=0.39  Score=44.08  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||.++..
T Consensus       124 ~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~  154 (287)
T cd06621         124 RKIIHRDIKPSNILLTR-KGQVKLCDFGVSGE  154 (287)
T ss_pred             CCcccCCCCHHHEEEec-CCeEEEeecccccc
Confidence            46899999999999976 67899999998764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0600|consensus

Probab=86.56  E-value=0.74  Score=47.24  Aligned_cols=35  Identities=20%  Similarity=0.243  Sum_probs=29.5

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ....+.|+|+++.|||+|. +|.+.|=||-.|....
T Consensus       235 H~~gvlHRDIK~SNiLidn-~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  235 HSRGVLHRDIKGSNILIDN-NGVLKIADFGLARFYT  269 (560)
T ss_pred             hhcCeeeccccccceEEcC-CCCEEeccccceeecc
Confidence            4467899999999999986 7889999999887433

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=86.55  E-value=0.44  Score=43.05  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=26.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ ++.+.++||..+..
T Consensus       125 ~g~~H~dl~p~nili~~-~~~~kl~dfg~~~~  155 (269)
T cd05065         125 MNYVHRDLAARNILVNS-NLVCKVSDFGLSRF  155 (269)
T ss_pred             CCEeecccChheEEEcC-CCcEEECCCccccc
Confidence            46899999999999976 57899999987653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=86.55  E-value=0.48  Score=45.98  Aligned_cols=30  Identities=23%  Similarity=0.268  Sum_probs=25.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++. .+.+.++||.++.
T Consensus       233 ~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~  262 (375)
T cd05104         233 KNCIHRDLAARNILLTH-GRITKICDFGLAR  262 (375)
T ss_pred             CCeeccCCchhhEEEEC-CCcEEEecCccce
Confidence            35799999999999986 5678899998775

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=86.53  E-value=0.6  Score=43.06  Aligned_cols=32  Identities=25%  Similarity=0.173  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeC---CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++   ..+.+.++||..+..
T Consensus       127 ~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~  161 (316)
T cd07842         127 NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL  161 (316)
T ss_pred             CCEeeCCCCHHHEEEcCCCCccceEEECCCccccc
Confidence            35899999999999974   146799999987763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=86.47  E-value=0.34  Score=43.02  Aligned_cols=31  Identities=26%  Similarity=0.304  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++. .+.+.|+||.++..
T Consensus       121 ~~i~H~dl~~~ni~~~~-~~~~kl~d~~~~~~  151 (258)
T cd06632         121 RNTVHRDIKGANILVDT-NGVVKLADFGMAKQ  151 (258)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEccCcccee
Confidence            46899999999999976 67899999987764

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=86.47  E-value=0.59  Score=42.89  Aligned_cols=31  Identities=23%  Similarity=0.488  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.+.||.++..
T Consensus       135 ~~i~H~dl~p~nili~~-~~~~kl~dfg~~~~  165 (302)
T cd07864         135 KNFLHRDIKCSNILLNN-KGQIKLADFGLARL  165 (302)
T ss_pred             CCeecCCCCHHHEEECC-CCcEEeCccccccc
Confidence            36899999999999976 67899999987763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=86.24  E-value=0.33  Score=43.34  Aligned_cols=31  Identities=23%  Similarity=0.275  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||.+.||++++ .+.+.|+||.++..
T Consensus       118 ~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~  148 (264)
T cd06626         118 HGIVHRDIKPANIFLDH-NGVIKLGDFGCAVK  148 (264)
T ss_pred             CCcccCCCCHHHEEECC-CCCEEEcccccccc
Confidence            35799999999999986 67899999988765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=86.12  E-value=0.66  Score=41.82  Aligned_cols=31  Identities=23%  Similarity=0.309  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++++||++++ ++.+.++||..+.-
T Consensus       125 ~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~  155 (264)
T cd06653         125 NMIVHRDIKGANILRDS-AGNVKLGDFGASKR  155 (264)
T ss_pred             CCEecCCCCHHHEEEcC-CCCEEECccccccc
Confidence            35899999999999976 67899999987763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=86.11  E-value=0.52  Score=42.84  Aligned_cols=31  Identities=26%  Similarity=0.419  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+.|+|+.+.||++++ ++.+.++||..+..
T Consensus       120 ~~ivH~dl~p~ni~i~~-~~~~~l~dfg~~~~  150 (277)
T cd06642         120 ERKIHRDIKAANVLLSE-QGDVKLADFGVAGQ  150 (277)
T ss_pred             CCeeccCCChheEEEeC-CCCEEEcccccccc
Confidence            46899999999999976 67899999987753

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=85.95  E-value=0.98  Score=41.00  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||++++ ++.+.++||.++.
T Consensus       119 ~~i~H~~l~p~nill~~-~~~~~l~dfg~~~  148 (284)
T cd07860         119 HRVLHRDLKPQNLLINT-EGAIKLADFGLAR  148 (284)
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEeeccchh
Confidence            35899999999999986 5789999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=85.84  E-value=0.98  Score=49.80  Aligned_cols=32  Identities=25%  Similarity=0.225  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.||+++. .+.+.++||..|...
T Consensus       132 ~GIIHRDLKPeNILLd~-dg~vKLiDFGLAk~i  163 (932)
T PRK13184        132 KGVLHRDLKPDNILLGL-FGEVVILDWGAAIFK  163 (932)
T ss_pred             CCccccCCchheEEEcC-CCCEEEEecCcceec
Confidence            36899999999999976 678999999988654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=85.84  E-value=0.79  Score=47.21  Aligned_cols=30  Identities=23%  Similarity=0.385  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||+++. ++.+.++||..+.
T Consensus       328 ~~ivHrDLKp~NILl~~-~~~~kL~DFGla~  357 (507)
T PLN03224        328 IGIVHRDIKPENLLVTV-DGQVKIIDFGAAV  357 (507)
T ss_pred             CCeecCCCchHhEEECC-CCcEEEEeCcCcc
Confidence            35799999999999976 5789999998874

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=85.82  E-value=0.86  Score=43.30  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||++++ .+.+.|+||.++..
T Consensus       137 ~gi~H~dlkp~Nill~~-~~~~kL~dfg~~~~  167 (343)
T cd07851         137 AGIIHRDLKPSNIAVNE-DCELKILDFGLARH  167 (343)
T ss_pred             CCeecCCCCHHHeEECC-CCCEEEcccccccc
Confidence            45899999999999986 67899999988763

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PLN00181 protein SPA1-RELATED; Provisional

Probab=85.75  E-value=1  Score=48.36  Aligned_cols=31  Identities=10%  Similarity=0.143  Sum_probs=25.0

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...++|+||+|.|||++. .+.+.+|||..+.
T Consensus        98 ~~gIvHrDlKP~NiLl~~-~~~~k~~d~~~~~  128 (793)
T PLN00181         98 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCS  128 (793)
T ss_pred             hCCeeeccCCchhEEEcc-cCcEEEeeccccC
Confidence            356999999999999975 5678888886553

>KOG0659|consensus

Probab=85.72  E-value=0.48  Score=45.20  Aligned_cols=33  Identities=18%  Similarity=0.332  Sum_probs=27.9

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...-+.|+|++|+|+|+++ +|.+.+=||-.|..
T Consensus       118 H~~~IlHRDlKPnNLLis~-~g~lKiADFGLAr~  150 (318)
T KOG0659|consen  118 HSKWILHRDLKPNNLLISS-DGQLKIADFGLARF  150 (318)
T ss_pred             HhhhhhcccCCccceEEcC-CCcEEeecccchhc
Confidence            3467889999999999987 68899999987763

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=85.63  E-value=1.2  Score=43.92  Aligned_cols=30  Identities=23%  Similarity=0.328  Sum_probs=25.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ ++.+.++||..+.
T Consensus       256 ~~ivH~dikp~Nill~~-~~~~kL~DfGla~  285 (400)
T cd05105         256 KNCVHRDLAARNVLLAQ-GKIVKICDFGLAR  285 (400)
T ss_pred             CCeeCCCCChHhEEEeC-CCEEEEEeCCcce
Confidence            35899999999999986 5779999998775

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=85.42  E-value=0.83  Score=43.23  Aligned_cols=32  Identities=19%  Similarity=0.314  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+.+.||+++. .+.+.|+||..+...
T Consensus       127 ~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~~  158 (337)
T cd07858         127 ANVLHRDLKPSNLLLNA-NCDLKICDFGLARTT  158 (337)
T ss_pred             CCEecCCCCHHHEEEcC-CCCEEECcCcccccc
Confidence            46899999999999976 578999999877643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1164|consensus

Probab=85.31  E-value=0.4  Score=45.75  Aligned_cols=33  Identities=18%  Similarity=0.354  Sum_probs=26.6

Q ss_pred             CCeeeeecCCCCCCeeeeCCC----CeEEEEeecccc
Q psy8745          42 SPVVFCHNDLLLGNIIYDETE----DKVTFIDYEYAG   74 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~----~~l~lIDfEya~   74 (317)
                      ....++|+|++|+|+++....    ..|++|||-.|.
T Consensus       139 H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  139 HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            357999999999999996432    469999996665

>KOG1167|consensus

Probab=85.28  E-value=1  Score=45.10  Aligned_cols=34  Identities=18%  Similarity=0.354  Sum_probs=29.7

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ....+.|+|++|+|+|++...++-+||||-.|-.
T Consensus       149 h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  149 HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             hccCccccCCCccccccccccCCceEEechhHHH
Confidence            4578999999999999987678889999988774

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=85.15  E-value=0.53  Score=44.85  Aligned_cols=31  Identities=23%  Similarity=0.360  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||++++ ++.+.++||..+..
T Consensus       139 ~~ivH~dlkp~NIll~~-~~~~kl~dfg~~~~  169 (345)
T cd07877         139 ADIIHRDLKPSNLAVNE-DCELKILDFGLARH  169 (345)
T ss_pred             CCeeecCCChHHEEEcC-CCCEEEeccccccc
Confidence            45899999999999986 67899999987653

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=85.11  E-value=0.83  Score=41.34  Aligned_cols=51  Identities=20%  Similarity=0.203  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...+...+..+-..+... ....++|+|+.+.||++++ ++.+.++||..+..
T Consensus        97 ~~~~~~~~~ql~~~l~~l-h~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~  147 (274)
T cd06609          97 ETYIAFILREVLLGLEYL-HEEGKIHRDIKAANILLSE-EGDVKLADFGVSGQ  147 (274)
T ss_pred             HHHHHHHHHHHHHHHHHH-HhCCcccCCCCHHHEEECC-CCCEEEccccccee
Confidence            444444444333333221 1245899999999999986 67899999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0605|consensus

Probab=85.08  E-value=0.46  Score=48.83  Aligned_cols=32  Identities=16%  Similarity=0.411  Sum_probs=28.6

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ....+.|+|++|.|+|+|. .|.|.|=||-.|.
T Consensus       258 H~~gyIHRDIKPdNlLiD~-~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  258 HQLGYIHRDIKPDNLLIDA-KGHIKLSDFGLST  289 (550)
T ss_pred             HHcCcccccCChhheeecC-CCCEeeccccccc
Confidence            3578999999999999987 7999999999884

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=84.88  E-value=0.77  Score=41.94  Aligned_cols=29  Identities=21%  Similarity=0.478  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .+.|+|+.+.||++++ .+.+.++||..+.
T Consensus       124 ~i~H~dl~p~nil~~~-~~~~~l~d~gl~~  152 (284)
T cd06620         124 RIMHRDIKPSNILVNS-RGQIKLCDFGVSG  152 (284)
T ss_pred             CeeccCCCHHHEEECC-CCcEEEccCCccc
Confidence            5899999999999976 6789999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0578|consensus

Probab=84.87  E-value=1.4  Score=45.48  Aligned_cols=37  Identities=16%  Similarity=0.263  Sum_probs=30.5

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhh
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAF   80 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~f   80 (317)
                      ...+.|+|++..|||.+. +|.|.+.||-||+.....-
T Consensus       387 ~~gIiHrDIKSDnILL~~-~g~vKltDFGFcaqi~~~~  423 (550)
T KOG0578|consen  387 ARGIIHRDIKSDNILLTM-DGSVKLTDFGFCAQISEEQ  423 (550)
T ss_pred             hcceeeeccccceeEecc-CCcEEEeeeeeeecccccc
Confidence            367899999999999976 6889999999998644433

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=84.86  E-value=1.4  Score=40.04  Aligned_cols=31  Identities=19%  Similarity=0.236  Sum_probs=24.9

Q ss_pred             eeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~   75 (317)
                      .++|+|+.+.||+++..+  ..+.++||..+..
T Consensus       136 ~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~  168 (277)
T cd05036         136 HFIHRDIAARNCLLTCKGPGRVAKIADFGMARD  168 (277)
T ss_pred             CEeecccchheEEEeccCCCcceEeccCccccc
Confidence            589999999999997532  3588999987764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=84.68  E-value=0.86  Score=43.29  Aligned_cols=32  Identities=19%  Similarity=0.269  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||+++..++.+.++||.++..
T Consensus       133 ~givH~dikp~Nili~~~~~~~kl~dfg~~~~  164 (342)
T cd07854         133 ANVLHRDLKPANVFINTEDLVLKIGDFGLARI  164 (342)
T ss_pred             CCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence            46899999999999975456788999998864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=84.36  E-value=0.55  Score=42.44  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=25.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+++.||++++  +.+.++||..+.
T Consensus       119 ~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~  147 (282)
T cd07831         119 NGIFHRDIKPENILIKD--DILKLADFGSCR  147 (282)
T ss_pred             CCceecccCHHHEEEcC--CCeEEEeccccc
Confidence            35899999999999986  889999998775

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG2345|consensus

Probab=84.36  E-value=2.2  Score=40.52  Aligned_cols=31  Identities=19%  Similarity=0.323  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      -+.|+|++|+||++.+ .+..+++||--+...
T Consensus       149 ~yAH~DiKP~NILls~-~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  149 PYAHRDIKPANILLSD-SGLPVLMDLGSATQA  179 (302)
T ss_pred             cccccCCCcceeEecC-CCceEEEeccCcccc
Confidence            5999999999999976 688999999776643

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=84.35  E-value=1.6  Score=39.51  Aligned_cols=32  Identities=13%  Similarity=0.056  Sum_probs=24.1

Q ss_pred             CeeeeecCCCCCCeeeeCCCC------eEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETED------KVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~------~l~lIDfEya~   74 (317)
                      ...++|+|++|.||+++.+..      .+.++||..+.
T Consensus       123 ~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077         123 DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence            346899999999999964221      27899997764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=84.14  E-value=0.57  Score=42.55  Aligned_cols=30  Identities=27%  Similarity=0.295  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||++++ .+.+.++||.++.
T Consensus       136 ~~i~H~di~p~nil~~~-~~~~kl~d~g~~~  165 (280)
T cd05043         136 RGVIHKDIAARNCVIDE-ELQVKITDNALSR  165 (280)
T ss_pred             CCEeecccCHhhEEEcC-CCcEEECCCCCcc
Confidence            46899999999999976 5789999998875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=84.06  E-value=1.3  Score=39.88  Aligned_cols=32  Identities=16%  Similarity=0.207  Sum_probs=24.4

Q ss_pred             CeeeeecCCCCCCeeeeCCCCe-------EEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDK-------VTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~-------l~lIDfEya~   74 (317)
                      ...++|+|+++.||+++.++..       +.+.||..+.
T Consensus       118 ~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078         118 DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             HCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            3468999999999999753322       6788887764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=83.91  E-value=1.6  Score=39.38  Aligned_cols=30  Identities=23%  Similarity=0.382  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+.+.||++++ ++.+.+.||..+..
T Consensus       118 ~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~~  147 (282)
T cd07829         118 RILHRDLKPQNILINR-DGVLKLADFGLARA  147 (282)
T ss_pred             CcccCCCChheEEEcC-CCCEEEecCCcccc
Confidence            5799999999999976 68899999977653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0660|consensus

Probab=83.85  E-value=0.55  Score=46.08  Aligned_cols=37  Identities=16%  Similarity=0.220  Sum_probs=31.4

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ..-.+.|+||+|+|++++. +..+.+-||-+|...+..
T Consensus       142 HSAnViHRDLKPsNll~n~-~c~lKI~DFGLAR~~~~~  178 (359)
T KOG0660|consen  142 HSANVIHRDLKPSNLLLNA-DCDLKICDFGLARYLDKF  178 (359)
T ss_pred             hcccccccccchhheeecc-CCCEEeccccceeecccc
Confidence            4567899999999999987 678999999999876554

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=83.68  E-value=0.98  Score=41.75  Aligned_cols=30  Identities=20%  Similarity=0.408  Sum_probs=25.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|+.+.||+++. .+.+.++||..+.
T Consensus       134 ~gi~H~dL~p~Nili~~-~~~~kL~dfg~~~  163 (293)
T cd06647         134 NQVIHRDIKSDNILLGM-DGSVKLTDFGFCA  163 (293)
T ss_pred             CCEeeccCCHHHEEEcC-CCCEEEccCccee
Confidence            45899999999999976 5789999998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=83.48  E-value=1.1  Score=42.25  Aligned_cols=31  Identities=26%  Similarity=0.344  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++. .+.+.++||..+..
T Consensus       138 ~~i~H~dl~~~nill~~-~~~~kl~dfg~~~~  168 (335)
T PTZ00024        138 WYFMHRDLSPANIFINS-KGICKIADFGLARR  168 (335)
T ss_pred             CCeecccccHHHeEECC-CCCEEECCccceee
Confidence            46899999999999976 67899999987753

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=83.39  E-value=0.38  Score=42.01  Aligned_cols=58  Identities=26%  Similarity=0.489  Sum_probs=41.3

Q ss_pred             cchhhhhcCC-CCceEEE-----ecC--ceEEEeecCccCCC--CCCCCcccHHHHHHHHHhhcccCC
Q psy8745         187 SPQILHRAGL-APRLYAE-----FDN--GLVYQYVRGVTITP--DSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       187 ~~~~L~~~~~-gp~l~g~-----F~n--G~~e~fi~g~tL~~--~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      .++.|.++|+ .|++++.     +.+  ..+.+|++|+++..  ..-..+.+...+|+.|+++|...+
T Consensus        43 ~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~  110 (239)
T PF01636_consen   43 VLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPP  110 (239)
T ss_dssp             HHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHT
T ss_pred             HHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhcccccc
Confidence            3466788888 8888883     222  36899999999888  222345688899999999999853

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=83.28  E-value=1.4  Score=40.06  Aligned_cols=31  Identities=26%  Similarity=0.401  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+.+.||+++. ++.+.++||..+..
T Consensus       122 ~~i~h~dl~p~nili~~-~~~~~l~d~g~~~~  152 (280)
T cd06611         122 HKVIHRDLKAGNILLTL-DGDVKLADFGVSAK  152 (280)
T ss_pred             CCcccCCCChhhEEECC-CCCEEEccCccchh
Confidence            35799999999999976 67899999976543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG1187|consensus

Probab=83.02  E-value=1.4  Score=43.35  Aligned_cols=41  Identities=24%  Similarity=0.344  Sum_probs=31.2

Q ss_pred             HHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          36 ALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        36 ~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      +|.... +..+.|+|+++.|||+|+ +-.-.+-||..|..++.
T Consensus       189 yLH~~~-~~~iiHrDiKssNILLD~-~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  189 YLHEGC-PPPIIHRDIKSSNILLDE-DFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             HHccCC-CCCEecCCCCHHHeeECC-CCCEEccCccCcccCCc
Confidence            344433 337899999999999986 56788999999866654

>KOG0596|consensus

Probab=82.59  E-value=0.92  Score=47.17  Aligned_cols=30  Identities=23%  Similarity=0.389  Sum_probs=25.1

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...+.|.||+|.|+|+-  .|.|.||||--|.
T Consensus       478 ~~gIVHSDLKPANFLlV--kG~LKLIDFGIA~  507 (677)
T KOG0596|consen  478 QHGIVHSDLKPANFLLV--KGRLKLIDFGIAN  507 (677)
T ss_pred             HhceeecCCCcccEEEE--eeeEEeeeechhc
Confidence            45889999999999985  5899999995443

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=82.25  E-value=0.99  Score=44.65  Aligned_cols=29  Identities=28%  Similarity=0.339  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|+++.|||+++ .+.+.++||.++.
T Consensus       259 ~ivHrdlkp~NiLl~~-~~~~kL~DfGla~  287 (401)
T cd05107         259 NCVHRDLAARNVLICE-GKLVKICDFGLAR  287 (401)
T ss_pred             CcCcccCCcceEEEeC-CCEEEEEecCcce
Confidence            5799999999999986 6789999998876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0593|consensus

Probab=81.89  E-value=0.84  Score=44.43  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .-..|+|++|.|||++. ++.+.|-||-||.
T Consensus       120 ~n~IHRDIKPENILit~-~gvvKLCDFGFAR  149 (396)
T KOG0593|consen  120 NNCIHRDIKPENILITQ-NGVVKLCDFGFAR  149 (396)
T ss_pred             cCeecccCChhheEEec-CCcEEeccchhhH
Confidence            34789999999999986 6889999998876

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=81.81  E-value=1.3  Score=39.62  Aligned_cols=31  Identities=19%  Similarity=0.264  Sum_probs=26.0

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|+.+.||++++  +.+.++||.++..
T Consensus       124 ~~~i~h~~l~~~nili~~--~~~~l~d~g~~~~  154 (260)
T cd08222         124 QRRILHRDLKAKNIFLKN--NLLKIGDFGVSRL  154 (260)
T ss_pred             HcCccccCCChhheEeec--CCEeecccCceee
Confidence            357899999999999964  6699999987754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0615|consensus

Probab=81.72  E-value=0.73  Score=46.27  Aligned_cols=33  Identities=21%  Similarity=0.272  Sum_probs=25.8

Q ss_pred             CeeeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~   75 (317)
                      ...+||+|++|.|||+..+.  --|.+=||-.|-.
T Consensus       294 ~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  294 SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             HcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            46899999999999996532  2466889987764

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=81.72  E-value=1.3  Score=41.34  Aligned_cols=34  Identities=15%  Similarity=0.304  Sum_probs=28.2

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      ++.+|++|+++.   ..++.-...+|+.||+||....
T Consensus        72 ~l~~~i~G~~~~---~~~~~~~~~~g~~La~lH~~~~  105 (313)
T TIGR02906        72 VLTEWIEGRECD---FNNPIDLKKAAKGLALFHHASK  105 (313)
T ss_pred             EEehhccCcCCC---CCCHHHHHHHHHHHHHHHHhCC
Confidence            788999999887   3456678889999999998653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>KOG0595|consensus

Probab=81.69  E-value=2.5  Score=42.36  Aligned_cols=42  Identities=19%  Similarity=0.176  Sum_probs=32.5

Q ss_pred             eeeeecCCCCCCeeeeCC-C----CeEEEEeeccccCCchhhhHHHH
Q psy8745          44 VVFCHNDLLLGNIIYDET-E----DKVTFIDYEYAGVNYQAFDIANH   85 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~-~----~~l~lIDfEya~~n~~~fDiAn~   85 (317)
                      .-+.|+||+|.|||++.. .    -.+.+=||-+|.+-.++.-.++.
T Consensus       128 ~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl  174 (429)
T KOG0595|consen  128 NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL  174 (429)
T ss_pred             CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh
Confidence            578999999999999753 1    24779999999988766655443

>KOG1235|consensus

Probab=81.53  E-value=1.1  Score=46.67  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=23.6

Q ss_pred             CeeeeecCCCCCCeeeeC---CCCeEEEEeeccc
Q psy8745          43 PVVFCHNDLLLGNIIYDE---TEDKVTFIDYEYA   73 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya   73 (317)
                      ...|.|+|.|||||++..   .+.++.+.|+-..
T Consensus       319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~  352 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLY  352 (538)
T ss_pred             hcCCccCCCCCCcEEEecCCCCCccEEEEccccc
Confidence            346999999999999984   2467888886433

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=81.46  E-value=2.8  Score=37.84  Aligned_cols=58  Identities=14%  Similarity=0.259  Sum_probs=42.7

Q ss_pred             CcchhhhhcCC-CCceEEEecCceEEEeecCccCCCCCCCC--------cccHHHHHHHHHhh-cccC
Q psy8745         186 PSPQILHRAGL-APRLYAEFDNGLVYQYVRGVTITPDSIRE--------PHIHPLVARNMARL-HKVH  243 (317)
Q Consensus       186 ~~~~~L~~~~~-gp~l~g~F~nG~~e~fi~g~tL~~~~l~~--------~~i~~~IA~~la~~-H~~~  243 (317)
                      ..++.|.+.|+ .|++|+...|..+-|||.|..+....|++        ..+...+...|+++ |...
T Consensus        78 r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g  145 (197)
T cd05146          78 HNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN  145 (197)
T ss_pred             HHHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            56678889987 89999999999999999986333333333        23567788888887 7643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3021|consensus

Probab=81.10  E-value=1.8  Score=40.56  Aligned_cols=44  Identities=18%  Similarity=0.121  Sum_probs=32.2

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHH
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFD   87 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~   87 (317)
                      .-..+.|+||+.+|+-.|+ .+.-++.|= -+.|+++-||+|...+
T Consensus       208 I~PaLlHGDLW~GNva~D~-~~ePiIfDP-asfYgh~Efefgia~m  251 (313)
T KOG3021|consen  208 ILPALLHGDLWSGNVAEDG-AGEPIIFDP-ASFYGHSEFEFGIAKM  251 (313)
T ss_pred             eehhhhccccccCcccccC-CCCceEeCc-hhhcCCcHHHHHHHHH
Confidence            3456789999999998876 344555553 3468999999997644

>KOG0665|consensus

Probab=80.83  E-value=0.93  Score=44.21  Aligned_cols=37  Identities=19%  Similarity=0.304  Sum_probs=30.0

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA   79 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~   79 (317)
                      ....+.|+||+|.||+++. +..+.+.||-+|.-..+.
T Consensus       135 hs~~IihRdLkPsnivv~~-~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen  135 HSAGIIHRDLKPSNIVVNS-DCTLKILDFGLARTEDTD  171 (369)
T ss_pred             HhcceeecccCcccceecc-hhheeeccchhhcccCcc
Confidence            3578999999999999976 577889999888754443

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=80.52  E-value=1.1  Score=42.50  Aligned_cols=27  Identities=26%  Similarity=0.277  Sum_probs=23.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEY   72 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEy   72 (317)
                      ..+.|+||..-|||+.  ++.+++|||-=
T Consensus       186 a~LVHgDLSEyNiL~~--~~~p~iID~~Q  212 (268)
T COG1718         186 AGLVHGDLSEYNILVH--DGEPYIIDVSQ  212 (268)
T ss_pred             cCcccccchhhheEEE--CCeEEEEECcc
Confidence            4789999999999997  47899999943

>PHA02988 hypothetical protein; Provisional

Probab=80.24  E-value=1.6  Score=40.36  Aligned_cols=28  Identities=14%  Similarity=0.000  Sum_probs=23.3

Q ss_pred             eeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          46 FCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..|+|+.|.||++++ ++.+.++||-.+.
T Consensus       144 ~~Hrdlkp~nill~~-~~~~kl~dfg~~~  171 (283)
T PHA02988        144 KPYKNLTSVSFLVTE-NYKLKIICHGLEK  171 (283)
T ss_pred             CCCCcCChhhEEECC-CCcEEEcccchHh
Confidence            349999999999986 5789999996654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	317
3lq3_A	401	Crystal Structure Of Human Choline Kinase Beta In C		1e-20
3feg_A	379	Crystal Structure Of Human Choline Kinase Beta In C		2e-20
2ig7_A	401	Crystal Structure Of Human Choline Kinase B Length		2e-20
2i7q_A	402	Crystal Structure Of Human Choline Kinase A Length		5e-18
3f2r_A	401	Crystal Structure Of Human Choline Kinase Alpha In		5e-18
3zm9_A	383	The Mechanism Of Allosteric Coupling In Choline Kin		6e-18
2cko_A	390	Crystal Structure Of Human Choline Kinase Alpha 2 L		7e-18
1nw1_A	429	Crystal Structure Of Choline Kinase Length = 429		3e-17
2qg7_A	458	Plasmodium Vivax Ethanolamine Kinase Pv091845 Lengt		3e-14
2qg7_A	458	Plasmodium Vivax Ethanolamine Kinase Pv091845 Lengt		1e-04
3mes_A	424	Crystal Structure Of Choline Kinase From Cryptospor		1e-12
3c5i_A	369	Crystal Structure Of Plasmodium Knowlesi Choline Ki		2e-12
3fi8_A	362	Crystal Structure Of Choline Kinase From Plasmodium		2e-10
3dxq_A	301	Crystal Structure Of CholineETHANOLAMINE KINASE FAM		5e-05

>pdb|3LQ3|A Chain A, Crystal Structure Of Human Choline Kinase Beta In Complex With Phosphorylated Hemicholinium-3 And Adenosine Nucleotide Length = 401

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 22/173 (12%)
Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIY---DETEDKVTFIDYEYAGVNYQAFDI 82
           L+ +   +   L  T SPVVFCHND+  GNI+     E  D +  +D+EY+  NY+ FDI
Sbjct: 224 LKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDI 283
Query: 83  ANHFDE-----------FAGVSPIDHSRYPGPEFQLSWLRTYLEEY----TGSPPSPHQL 127
            NHF E           F    P D   YP  E QL ++R YL E     T S     +L
Sbjct: 284 GNHFCEWVYDYTHEEWPFYKARPTD---YPTQEQQLHFIRHYLAEAKKGETLSQEEQRKL 340
Query: 128 AT-LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDK 179
              L  +V +++  +H FW +W ++QA  S IEF +  YA S +Q Y  ++ +
Sbjct: 341 EEDLLVEVSRYALASHFFWGLWSILQASMSTIEFGYLDYAQSRFQFYFQQKGQ 393

>pdb|3FEG|A Chain A, Crystal Structure Of Human Choline Kinase Beta In Complex With Phosphorylated Hemicholinium-3 And Adenosine Nucleotide Length = 379

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 22/173 (12%)
Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIY---DETEDKVTFIDYEYAGVNYQAFDI 82
           L+ +   +   L  T SPVVFCHND+  GNI+     E  D +  +D+EY+  NY+ FDI
Sbjct: 202 LKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDI 261
Query: 83  ANHFDE-----------FAGVSPIDHSRYPGPEFQLSWLRTYLEEY----TGSPPSPHQL 127
            NHF E           F    P D   YP  E QL ++R YL E     T S     +L
Sbjct: 262 GNHFCEWVYDYTHEEWPFYKARPTD---YPTQEQQLHFIRHYLAEAKKGETLSQEEQRKL 318
Query: 128 AT-LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDK 179
              L  +V +++  +H FW +W ++QA  S IEF +  YA S +Q Y  ++ +
Sbjct: 319 EEDLLVEVSRYALASHFFWGLWSILQASMSTIEFGYLDYAQSRFQFYFQQKGQ 371

>pdb|2IG7|A Chain A, Crystal Structure Of Human Choline Kinase B Length = 401

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 22/173 (12%)
Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIY---DETEDKVTFIDYEYAGVNYQAFDI 82
           L+ +   +   L  T SPVVFCHND+  GNI+     E  D +  +D+EY+  NY+ FDI
Sbjct: 224 LKDEXGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLXLVDFEYSSYNYRGFDI 283
Query: 83  ANHFDE-----------FAGVSPIDHSRYPGPEFQLSWLRTYLEEY----TGSPPSPHQL 127
            NHF E           F    P D   YP  E QL ++R YL E     T S     +L
Sbjct: 284 GNHFCEWVYDYTHEEWPFYKARPTD---YPTQEQQLHFIRHYLAEAKKGETLSQEEQRKL 340
Query: 128 AT-LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDK 179
              L  +V +++  +H FW +W ++QA  S IEF +  YA S +Q Y  ++ +
Sbjct: 341 EEDLLVEVSRYALASHFFWGLWSILQASXSTIEFGYLDYAQSRFQFYFQQKGQ 393

>pdb|2I7Q|A Chain A, Crystal Structure Of Human Choline Kinase A Length = 402

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 33/193 (17%)
Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETED-----KVTF 67
           SR + L       L  + + + + L  T SPVVFCHND   GNI+  E  +     K+  
Sbjct: 214 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLML 273
Query: 68  IDYEYAGVNYQAFDIANHFDEFAGVSPIDHS------------RYPGPEFQLSWLRTYLE 115
           ID+EY+  NY+ FDI NHF E+      D+S            +YP  + QL ++ +YL 
Sbjct: 274 IDFEYSSYNYRGFDIGNHFCEWM----YDYSYEKYPFFRANIRKYPTKKQQLHFISSYLP 329
Query: 116 EYTGSPPSPHQLAT---------LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYA 166
            +         L+T         +  +V +F+  +H  W +W +VQA+ S IEF +  YA
Sbjct: 330 AFQNDF---ENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYA 386
Query: 167 SSTYQGYVLKRDK 179
            + +  Y  ++ K
Sbjct: 387 QARFDAYFHQKRK 399

>pdb|3F2R|A Chain A, Crystal Structure Of Human Choline Kinase Alpha In Complex With Hemicholinium-3 Length = 401

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 33/193 (17%)
Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETED-----KVTF 67
           SR + L       L  + + + + L  T SPVVFCHND   GNI+  E  +     K+  
Sbjct: 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLML 272
Query: 68  IDYEYAGVNYQAFDIANHFDEFAGVSPIDHS------------RYPGPEFQLSWLRTYLE 115
           ID+EY+  NY+ FDI NHF E+      D+S            +YP  + QL ++ +YL 
Sbjct: 273 IDFEYSSYNYRGFDIGNHFCEWM----YDYSYEKYPFFRANIRKYPTKKQQLHFISSYLP 328
Query: 116 EYTGSPPSPHQLAT---------LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYA 166
            +         L+T         +  +V +F+  +H  W +W +VQA+ S IEF +  YA
Sbjct: 329 AFQNDF---ENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYA 385
Query: 167 SSTYQGYVLKRDK 179
            + +  Y  ++ K
Sbjct: 386 QARFDAYFHQKRK 398

>pdb|3ZM9|A Chain A, The Mechanism Of Allosteric Coupling In Choline Kinase A1 Revealed By A Rationally Designed Inhibitor Length = 383

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 33/193 (17%)
Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETED-----KVTF 67
           SR + L       L  + + + + L  T SPVVFCHND   GNI+  E  +     K+  
Sbjct: 195 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLML 254
Query: 68  IDYEYAGVNYQAFDIANHFDEFAGVSPIDHS------------RYPGPEFQLSWLRTYLE 115
           ID+EY+  NY+ FDI NHF E+      D+S            +YP  + QL ++ +YL 
Sbjct: 255 IDFEYSSYNYRGFDIGNHFCEWM----YDYSYEKYPFFRANIRKYPTKKQQLHFISSYLP 310
Query: 116 EYTGSPPSPHQLAT---------LHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYA 166
            +         L+T         +  +V +F+  +H  W +W +VQA+ S IEF +  YA
Sbjct: 311 AFQNDF---ENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYA 367
Query: 167 SSTYQGYVLKRDK 179
            + +  Y  ++ K
Sbjct: 368 QARFDAYFHQKRK 380

>pdb|2CKO|A Chain A, Crystal Structure Of Human Choline Kinase Alpha 2 Length = 390

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 29/191 (15%)
Query: 13  SRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETED-----KVTF 67
           SR + L       L  + + + + L  T SPVVFCHND   GNI+  E  +     K+  
Sbjct: 202 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLML 261
Query: 68  IDYEYAGVNYQAFDIANHFDEFAGVSPIDHS------------RYPGPEFQLSWLRTYL- 114
           ID+EY+  NY+ FDI NHF E+      D+S            +YP  + QL ++ +YL 
Sbjct: 262 IDFEYSSYNYRGFDIGNHFCEWM----YDYSYEKYPFFRANIRKYPTKKQQLHFISSYLP 317
Query: 115 ------EEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASS 168
                 E  +    S  +   L  +V +F+  +H  W +W +VQA+ S IEF +  YA +
Sbjct: 318 AFQNDFENLSTEEKSIIKEEML-LEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYAQA 376
Query: 169 TYQGYVLKRDK 179
            +  Y  ++ K
Sbjct: 377 RFDAYFHQKRK 387

>pdb|1NW1|A Chain A, Crystal Structure Of Choline Kinase Length = 429

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 26  LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIY--------------DETED-------- 63
           L  + +++   +S +KSPV FCHNDL  GNI+               DET+         
Sbjct: 231 LARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAF 290
Query: 64  -----KVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHS--------RYPGPEFQLSWL 110
                ++  ID+EYA  NY+AFD ANHF E+     ID +         +P  +  L + 
Sbjct: 291 NPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFF 350
Query: 111 RTYLEEYTGSPPSP--HQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASS 168
             YL E   +  +    +   L  +   F PV+H FW +WGL+Q E S + F F  Y   
Sbjct: 351 LNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGRD 410
Query: 169 TYQGY 173
               Y
Sbjct: 411 RLSLY 415

>pdb|2QG7|A Chain A, Plasmodium Vivax Ethanolamine Kinase Pv091845 Length = 458

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 42/179 (23%)
Query: 33  IETALSKTKSPVVFCHNDLLLGNII----------------------------------- 57
           +E+   +  SP+V CH DLL  NII                                   
Sbjct: 279 VESLCKRENSPIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGET 338
Query: 58  -YDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE 116
                 D ++FID+EY+    +A+DIANHF+E+AG +  D    P  E +  ++  YL  
Sbjct: 339 GEGGEGDSISFIDFEYSCPMERAYDIANHFNEYAGFN-CDWDLTPSKEEEYHFIMHYL-- 395
Query: 117 YTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVL 175
                     +  L  ++Q F   +H  W +W L+Q  HS I+FDF  Y  +      L
Sbjct: 396 ---GTDDEELINQLIREIQPFYICSHINWGLWSLLQGMHSSIDFDFINYGMTRLTASCL 451

>pdb|2QG7|A Chain A, Plasmodium Vivax Ethanolamine Kinase Pv091845 Length = 458

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 190 ILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN 245
           IL+   +A ++Y  F NG + +++ G  ++ + I+ P    L+A+N+  LH +  N
Sbjct: 160 ILYNKNIAKKIYVFFTNGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLN 215

>pdb|3MES|A Chain A, Crystal Structure Of Choline Kinase From Cryptosporidium Parvum Iowa Ii, Cgd3_2030 Length = 424

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 33  IETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF--- 89
           +E  L      +VF HNDL   N++  +T++ +  IDYEY+ +N+   DIAN+F E+   
Sbjct: 251 LELKLYSPAFSLVFAHNDLQENNLL--QTQNNIRMIDYEYSAINFAGADIANYFCEYIYD 308
Query: 90  --AGVSP---IDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQ--LATLHWQVQQFSPVAH 142
             +   P     +  YP  E +  ++  YL +       P Q  +  +   V+ F+ ++H
Sbjct: 309 YCSEKQPYFKFKYEDYPCEELRKLFISVYLSQTLQEQVMPSQQIVHIMTKAVEVFTLISH 368
Query: 143 CFWTIWGLVQA---EHSDIEFDFFQYASSTYQGYVLKRDKYL 181
             W +W + +    + + +EFDF +YA++ +  Y+ K+ + +
Sbjct: 369 ITWGLWSIARTPGYQPNSVEFDFTEYANTRFTHYLQKKKELI 410

>pdb|3C5I|A Chain A, Crystal Structure Of Plasmodium Knowlesi Choline Kinase, Pkh_134520 Length = 369

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 42  SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA---GVS----- 93
           + +VFCHNDL   NII   T   +  ID+EY+G N+ A DIAN F E +    VS     
Sbjct: 210 NTIVFCHNDLQENNII--NTNKCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFF 267
Query: 94  PIDHSRYPGPEFQLSWLRTYLEEYTGSP---PSPHQLATLHWQVQQFSPVAHCFWTIWGL 150
            ID  +Y   E +  ++  YL  Y       P+P  +  +   V+  +  AH  W  W +
Sbjct: 268 EIDKKKYISYENRKLFITAYLSNYLDKSLVVPTPKLIDEILEAVEVQALGAHLLWGFWSI 327
Query: 151 VQA--EHSDIEFDFFQYASSTYQGY 173
           ++     S  EFDFF YA    + Y
Sbjct: 328 IRGYQTKSYNEFDFFLYAEQRLKMY 352

>pdb|3FI8|A Chain A, Crystal Structure Of Choline Kinase From Plasmodium Falciparum, Pf14_0020 Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 33  IETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV 92
           I T +    + +VFCHNDL   NI+   T   +  ID+EY+G N+ + DIAN F E    
Sbjct: 193 IYTQIENIANDIVFCHNDLQENNIM--NTNKCLRLIDFEYSGYNFLSADIANFFIE---- 246
Query: 93  SPIDHS------------RYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPV 140
           + ID+S             Y   E ++ ++ TYL +Y     +      +   ++     
Sbjct: 247 TTIDYSYNAYPFFIINKKNYISYESRILFVTTYLSKYLDDSTAASDQDIIDQFLEAIEVQ 306
Query: 141 A---HCFWTIWGLVQAEHSDI--EFDFFQYASSTYQGY 173
           A   H  W  W +++   +    EFDFF YA    + Y
Sbjct: 307 ALGLHLIWAFWSIIRGYQTKSYNEFDFFLYAKERLKMY 344

>pdb|3DXQ|A Chain A, Crystal Structure Of CholineETHANOLAMINE KINASE FAMILY PROTEIN (Np_106042.1) From Mesorhizobium Loti At 2.55 A Resolution Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 36/181 (19%)
Query: 6   GAGLMFSSRFQAL----------------FPGGVSQLQSDWQYIETALSKTKSPVVFCHN 49
           G+G +F  RF+                   P G   +  +   + +AL+    P+  CH 
Sbjct: 119 GSGAVFPFRFELFAXIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAACHC 178
Query: 50  DLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSW 109
           D L  N +  +T ++   +D+EY+G N   +D+ +   E               +F  + 
Sbjct: 179 DPLCENFL--DTGERXWIVDWEYSGXNDPLWDLGDLSVE--------------GKFNANQ 222
Query: 110 LRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASST 169
                  Y G    P +      +V  +       WT+WGL+Q  + +   DF  YA   
Sbjct: 223 DEELXRAYFGGEARPAE----RGRVVIYKAXCDLLWTLWGLIQLANDNPVDDFRAYADGR 278
Query: 170 Y 170
           +
Sbjct: 279 F 279

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	317
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	4e-39
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	2e-11
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	3e-36
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	1e-12
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	4e-36
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	5e-12
3mes_A	424	Choline kinase; malaria, structural genomics, stru	1e-35
3mes_A	424	Choline kinase; malaria, structural genomics, stru	4e-11
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	2e-32
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	2e-09
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	4e-32
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	6e-12
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	2e-30
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	4e-04
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	6e-08
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	6e-07
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	3e-05
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	1e-04
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	2e-04

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* Length = 379

 Score =  140 bits (354), Expect = 4e-39
 Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 16/174 (9%)

Query: 30  WQYIETALSKTKSPVVFCHNDLLLGNIIY---DETEDKVTFIDYEYAGVNYQAFDIANHF 86
              +   L  T SPVVFCHND+  GNI+     E  D +  +D+EY+  NY+ FDI NHF
Sbjct: 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDIGNHF 265

Query: 87  DEFAG--------VSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQ-----LATLHWQ 133
            E+                + YP  E QL ++R YL E         +        L  +
Sbjct: 266 CEWVYDYTHEEWPFYKARPTDYPTQEQQLHFIRHYLAEAKKGETLSQEEQRKLEEDLLVE 325

Query: 134 VQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPS 187
           V +++  +H FW +W ++QA  S IEF +  YA S +Q Y  ++ +       S
Sbjct: 326 VSRYALASHFFWGLWSILQASMSTIEFGYLDYAQSRFQFYFQQKGQLTSVHSSS 379

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* Length = 379

 Score = 63.4 bits (153), Expect = 2e-11
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKT 248
            IL    L P+LY  F  G + QY+    +    +REP +   +A  MA+ H +      
Sbjct: 108 AILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTK 167

Query: 249 PK--LWSTGKHMLSLIPRTYSNPDKQERYC 276
               L+ T +  L  I         +    
Sbjct: 168 EPHWLFGTMERYLKQIQDLPPTGLPEMNLL 197

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 Length = 429

 Score =  133 bits (336), Expect = 4e-36
 Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 37/194 (19%)

Query: 25  QLQSDWQYIETALSKTKSPVVFCHNDLLLGNII--------------------------- 57
            L  + +++   +S +KSPV FCHNDL  GNI+                           
Sbjct: 230 DLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSA 289

Query: 58  YDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV--------SPIDHSRYPGPEFQLSW 109
           ++  + ++  ID+EYA  NY+AFD ANHF E+             I    +P  +  L +
Sbjct: 290 FNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEF 349

Query: 110 LRTYLEEYTGSPPSP--HQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYAS 167
              YL E   +  +    +   L  +   F PV+H FW +WGL+Q E S + F F  Y  
Sbjct: 350 FLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGR 409

Query: 168 STYQGYVLKRDKYL 181
                Y   +    
Sbjct: 410 DRLSLYFKHKQLLK 423

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 Length = 429

 Score = 65.0 bits (157), Expect = 5e-12
 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKT 248
            +L    L P+LY  F  G + +Y+    ++   I   H+   +A+ +A++H++   +  
Sbjct: 130 TLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWK 189

Query: 249 PK--LWSTGKHMLSLIPRTYSNPDKQ 272
               L    +  L  +  T     + 
Sbjct: 190 EPDYLCEALQRWLKQLTGTVDAEHRF 215

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} Length = 424

 Score =  132 bits (333), Expect = 1e-35
 Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 15/164 (9%)

Query: 31  QYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF- 89
           + +E  L      +VF HNDL   N++  +  + +  IDYEY+ +N+   DIAN+F E+ 
Sbjct: 249 RALELKLYSPAFSLVFAHNDLQENNLLQTQ--NNIRMIDYEYSAINFAGADIANYFCEYI 306

Query: 90  -------AGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSP--PSPHQLATLHWQVQQFSPV 140
                         +  YP  E +  ++  YL +       PS   +  +   V+ F+ +
Sbjct: 307 YDYCSEKQPYFKFKYEDYPCEELRKLFISVYLSQTLQEQVMPSQQIVHIMTKAVEVFTLI 366

Query: 141 AHCFWTIWGLVQA---EHSDIEFDFFQYASSTYQGYVLKRDKYL 181
           +H  W +W + +    + + +EFDF +YA++ +  Y+ K+ + +
Sbjct: 367 SHITWGLWSIARTPGYQPNSVEFDFTEYANTRFTHYLQKKKELI 410

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} Length = 424

 Score = 62.4 bits (150), Expect = 4e-11
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 8/95 (8%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-- 246
           + L    +AP + A+F  G + +++ G  +T   ++  HI   VA+NM  LH ++S    
Sbjct: 128 RYLSNINIAPNIIADFPEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRAD 187

Query: 247 ------KTPKLWSTGKHMLSLIPRTYSNPDKQERY 275
                 K P L+              S  + Q   
Sbjct: 188 FPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDK 222

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} Length = 458

 Score =  124 bits (311), Expect = 2e-32
 Identities = 50/190 (26%), Positives = 74/190 (38%), Gaps = 42/190 (22%)

Query: 24  SQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETE--------------------- 62
             L+     +E+   +  SP+V CH DLL  NII                          
Sbjct: 270 DVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEG 329

Query: 63  ---------------DKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQL 107
                          D ++FID+EY+    +A+DIANHF+E+AG    D    P  E + 
Sbjct: 330 GETGEGGETGEGGEGDSISFIDFEYSCPMERAYDIANHFNEYAGF-NCDWDLTPSKEEEY 388

Query: 108 SWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYAS 167
            ++  YL            +  L  ++Q F   +H  W +W L+Q  HS I+FDF  Y  
Sbjct: 389 HFIMHYLGTDD-----EELINQLIREIQPFYICSHINWGLWSLLQGMHSSIDFDFINYGM 443

Query: 168 STYQGYVLKR 177
           +      L  
Sbjct: 444 TRLTASCLPI 453

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} Length = 458

 Score = 57.5 bits (137), Expect = 2e-09
 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKT 248
            IL+   +A ++Y  F NG + +++ G  ++ + I+ P    L+A+N+  LH +  N   
Sbjct: 159 CILYNKNIAKKIYVFFTNGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNENL 218

Query: 249 PKLWSTGKHM-LSLIPRTYSNPDKQERYCSRAQSLTSSEPK 288
            K     + +  +     ++   K     +  +    S   
Sbjct: 219 YKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICSFDA 259

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* Length = 369

 Score =  121 bits (304), Expect = 4e-32
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 15/172 (8%)

Query: 29  DWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE 88
            +  + +      + +VFCHNDL   NII       +  ID+EY+G N+ A DIAN F E
Sbjct: 197 KFMKVYSKSDNLANTIVFCHNDLQENNIINTN--KCLRLIDFEYSGFNFLATDIANFFIE 254

Query: 89  FA--------GVSPIDHSRYPGPEFQLSWLRTYLEEYTG---SPPSPHQLATLHWQVQQF 137
            +            ID  +Y   E +  ++  YL  Y       P+P  +  +   V+  
Sbjct: 255 TSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKSLVVPTPKLIDEILEAVEVQ 314

Query: 138 SPVAHCFWTIWGLVQAEH--SDIEFDFFQYASSTYQGYVLKRDKYLGTSPPS 187
           +  AH  W  W +++     S  EFDFF YA    + Y  +++  +  +   
Sbjct: 315 ALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDDQKEYLISNNIIK 366

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* Length = 369

 Score = 64.6 bits (156), Expect = 6e-12
 Identities = 14/94 (14%), Positives = 39/94 (41%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKT 248
           + + +  +AP+L   F+ G + +++ G  +  D ++ P I   +A  + + H +      
Sbjct: 92  KTMSKYKIAPQLLNTFNGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHL 151

Query: 249 PKLWSTGKHMLSLIPRTYSNPDKQERYCSRAQSL 282
           P+ W     +  ++ +  +   K +        +
Sbjct: 152 PEHWDRTPCIFKMMEKWKNQLFKYKNIEKYNCDI 185

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} Length = 301

 Score =  115 bits (289), Expect = 2e-30
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 20/153 (13%)

Query: 19  FPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78
            P G   +  +   + +AL+    P+  CH D L  N +     +++  +D+EY+G+N  
Sbjct: 148 LPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTG--ERMWIVDWEYSGMNDP 205

Query: 79  AFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFS 138
            +D+ +   E                     +R Y          P +      +V  + 
Sbjct: 206 LWDLGDLSVEG----------KFNANQDEELMRAYFGGE----ARPAERG----RVVIYK 247

Query: 139 PVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQ 171
            +    WT+WGL+Q  + +   DF  YA   + 
Sbjct: 248 AMCDLLWTLWGLIQLANDNPVDDFRAYADGRFA 280

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} Length = 301

 Score = 40.9 bits (95), Expect = 4e-04
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 6/100 (6%)

Query: 189 QILHRAGLAPR-LYAEFDNG-LVYQYVRGV-TITPDSIRE-PHIHPLVARNMARLHKVHS 244
           +   +AG++P  L+ +   G +V +Y+ G  T++P+  +  P           +LH   +
Sbjct: 63  REAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGA 122

Query: 245 NM-KTPKLWSTGKHMLSLIPRTYSN-PDKQERYCSRAQSL 282
                 +L++     L ++       P         A  +
Sbjct: 123 VFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGV 162

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} Length = 346

 Score = 52.3 bits (125), Expect = 6e-08
 Identities = 14/89 (15%), Positives = 24/89 (26%), Gaps = 11/89 (12%)

Query: 29  DWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE 88
              Y+     + K     CH D   GN +  E  +++  ID +    +    D+      
Sbjct: 208 QSTYVPW-TEQLKKSPNLCHQDYGTGNTLLGE-NEQIWVIDLDTVSFDLPIRDLRKM--- 262

Query: 89  FAGVSPIDHSRYPGPEFQLSWLRTYLEEY 117
                 I         +        L  Y
Sbjct: 263 ------IIPLLDTTGVWDDETFNVMLNAY 285

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* Length = 339

 Score = 49.3 bits (117), Expect = 6e-07
 Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 12/106 (11%)

Query: 23  VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82
           + +L    + +   +       V CH+D+  GN++    E+ +  ID++   +  +  D+
Sbjct: 185 IHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGN-EESIYIIDWDEPMLAPKERDL 243

Query: 83  ANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLA 128
                                  +   ++ + E Y         L+
Sbjct: 244 MFIG-----------GGVGNVWNKPHEIQYFYEGYGEINVDKTILS 278

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} Length = 420

 Score = 44.6 bits (104), Expect = 3e-05
 Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 21/137 (15%)

Query: 45  VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPE 104
              H DL  G+++   T+D    ID E++      FDI  +                   
Sbjct: 233 ALIHGDLHTGSVMV--TQDSTQVIDPEFSFYGPMGFDIGAYLGNLI-------------- 276

Query: 105 FQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQ 164
             L++          +    ++   L    Q ++     F  +W             +  
Sbjct: 277 --LAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFNKRFIALW---DQNKDGPGEAYLA 331

Query: 165 YASSTYQGYVLKRDKYL 181
              +  +     ++ Y+
Sbjct: 332 DIYNNTEVLKFVQENYM 348

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* Length = 397

 Score = 42.2 bits (98), Expect = 1e-04
 Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 45  VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF 89
              H DL  G+I    +E +   ID E+A      FD+       
Sbjct: 228 TLIHGDLHTGSIF--ASEHETKVIDPEFAFYGPIGFDVGQFIANL 270

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A Length = 304

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 19/122 (15%)

Query: 30  WQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVT-FIDYEYAGVNYQAFDIANHFDE 88
           ++ I       K      HND    +I++D  ++ +   ID+  A ++    D  +  ++
Sbjct: 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMED 236

Query: 89  FAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIW 148
                        G EF    +   L  Y         +   +   +++         I+
Sbjct: 237 DEE---------YGMEF----VSKILNHYKH--KDIPTVLEKYRMKEKYWSFE---KIIY 278

Query: 149 GL 150
           G 
Sbjct: 279 GK 280

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	317
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	100.0
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	100.0
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	100.0
3mes_A	424	Choline kinase; malaria, structural genomics, stru	100.0
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	99.97
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	99.97
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	99.97
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	99.92
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	99.47
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	99.39
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	99.32
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	99.27
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	99.25
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	99.19
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	99.18
3mes_A	424	Choline kinase; malaria, structural genomics, stru	99.16
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	99.15
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	99.02
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.99
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.99
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.96
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.94
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.92
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.92
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.92
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.91
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	98.88
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.87
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.86
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.83
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	98.7
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.48
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.41
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.06
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.03
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	95.59
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	95.46
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	95.41
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	95.31
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	95.28
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	95.23
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	95.06
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	95.02
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	95.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	94.99
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	94.98
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	94.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	94.86
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	94.81
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	94.74
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	94.73
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	94.72
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	94.72
3q4u_A	301	Activin receptor type-1; structural genomics conso	94.69
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	94.67
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	94.67
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	94.59
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	94.58
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	94.5
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	94.47
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	94.46
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	94.43
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	94.42
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	94.4
3o0g_A	292	Cell division protein kinase 5; kinase activator c	94.35
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	94.35
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.35
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	94.34
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	94.3
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	94.24
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	94.22
3fme_A	290	Dual specificity mitogen-activated protein kinase;	94.22
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	94.22
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	94.22
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	94.21
3soc_A	322	Activin receptor type-2A; structural genomics cons	94.2
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	94.19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	94.19
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	94.18
3pls_A	298	Macrophage-stimulating protein receptor; protein k	94.16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	94.13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	94.13
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	94.13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	94.11
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	94.1
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	94.1
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	94.08
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	94.08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	94.07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	94.06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	94.06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	94.05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	94.05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	94.04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	94.03
2a19_B	284	Interferon-induced, double-stranded RNA-activated	94.02
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	93.99
3ork_A	311	Serine/threonine protein kinase; structural genomi	93.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	93.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	93.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	93.94
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	93.92
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	93.92
3niz_A	311	Rhodanese family protein; structural genomics, str	93.91
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	93.89
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	93.87
3rp9_A	458	Mitogen-activated protein kinase; structural genom	93.87
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	93.86
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	93.85
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	93.82
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	93.82
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	93.82
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	93.82
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	93.81
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	93.81
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	93.8
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	93.79
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	93.77
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	93.77
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	93.76
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	93.75
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	93.75
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	93.74
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	93.72
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	93.71
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	93.71
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	93.69
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	93.69
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.68
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	93.67
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	93.66
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	93.65
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	93.64
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	93.63
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	93.62
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	93.61
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	93.61
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	93.6
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	93.6
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	93.58
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	93.58
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	93.57
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	93.55
3aln_A	327	Dual specificity mitogen-activated protein kinase;	93.54
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	93.52
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	93.52
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	93.51
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	93.51
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	93.51
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	93.5
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	93.5
2dyl_A	318	Dual specificity mitogen-activated protein kinase	93.5
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	93.48
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	93.48
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	93.47
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	93.46
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	93.45
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	93.44
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	93.44
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	93.44
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	93.44
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	93.43
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	93.43
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	93.42
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	93.4
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	93.4
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	93.4
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	93.4
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	93.38
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	93.38
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	93.37
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	93.35
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	93.34
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	93.31
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	93.27
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	93.27
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	93.27
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	93.26
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	93.25
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	93.23
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	93.23
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	93.22
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	93.2
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	93.19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	93.19
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	93.19
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	93.18
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	93.18
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	93.17
3uqc_A	286	Probable conserved transmembrane protein; structur	93.16
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	93.13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	93.11
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	93.09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	93.09
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	93.07
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	93.05
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	93.03
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	93.01
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	93.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	92.99
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	92.98
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	92.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	92.92
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	92.89
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	92.88
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	92.86
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	92.84
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	92.8
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	92.78
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	92.78
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	92.77
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	92.77
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	92.74
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	92.72
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	92.71
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	92.66
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	92.65
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	92.58
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	92.58
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	92.56
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	92.47
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	92.45
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	92.44
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	92.43
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	92.43
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	92.43
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	92.37
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	92.35
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	92.35
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	92.33
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	92.32
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	92.3
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	92.24
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	92.09
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	92.08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	92.07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	92.06
4aoj_A	329	High affinity nerve growth factor receptor; transf	92.02
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	92.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	91.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	91.94
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	91.93
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	91.91
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	91.9
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	91.88
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	91.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	91.85
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	91.84
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	91.8
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	91.8
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	91.8
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	91.76
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	91.74
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	91.74
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	91.73
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	91.73
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	91.72
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	91.72
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	91.69
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	91.65
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	91.64
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	91.6
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	91.56
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	91.52
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	91.44
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	91.43
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	91.34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	91.09
3bhy_A	283	Death-associated protein kinase 3; death associate	91.08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	91.01
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	90.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	90.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	90.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	90.85
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	90.8
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	90.7
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	90.7
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	90.69
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	90.41
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	90.35
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	90.22
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	90.2
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	90.11
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	90.04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	89.88
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	89.71
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	89.68
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	89.66
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	89.56
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	89.26
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	89.03
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	88.47
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.47
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	88.44
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	88.44
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	88.23
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	87.0
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	86.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	85.34
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	85.25
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	82.16

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=100.00  E-value=7.3e-38  Score=304.97  Aligned_cols=155  Identities=34%  Similarity=0.656  Sum_probs=137.5

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeC-----CCCeEEEEeeccccCCchhhhHHHHHHHhhCCC-------
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDE-----TEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS-------   93 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~-----~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~-------   93 (317)
                      +.++++||++.+...+.++||||||++++|||+.+     .++.|.|||||||++|+|+||||||||||+..+       
T Consensus       226 l~~~~~~l~~~l~~~~~~~vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~~fDlan~f~ew~~dy~~~~~~~  305 (401)
T 3g15_A          226 LPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPF  305 (401)
T ss_dssp             HHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEHHHHHHHHHHHTTEETTCSSTTS
T ss_pred             HHHHHHHHHHhhhccCCCeeeEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCchHhHHHHHHHHhcccCccCCCc
Confidence            56788999999999999999999999999999842     246799999999999999999999999998632       


Q ss_pred             -CCCCCCCCCHHHHHHHHHHHHHHhcC--CCCC----HHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHH
Q psy8745          94 -PIDHSRYPGPEFQLSWLRTYLEEYTG--SPPS----PHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYA  166 (317)
Q Consensus        94 -~~d~~~yp~~e~~~~fi~~YL~~y~~--~~~s----~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya  166 (317)
                       .++++.||+.++|..||+.|++.+.+  ...+    +.+++.|+.+|+.|.+++|++|++||++|+.+|+++|||++||
T Consensus       306 ~~~~~~~yPt~e~~~~fi~~Yl~~~~~~~~~~~~~~~~~~~~~l~~ev~~~~~~~~l~W~~Waiiq~~~s~idFdy~~Ya  385 (401)
T 3g15_A          306 FRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGYMDYA  385 (401)
T ss_dssp             CEECGGGSCCHHHHHHHHHHHHHHHCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSSCHHHHH
T ss_pred             cccccccCcCHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhcCCCCCHHHHH
Confidence             35778899999999999999998752  1122    2457899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhHhhh
Q psy8745         167 SSTYQGYVLKRDKY  180 (317)
Q Consensus       167 ~~R~~~y~~~k~el  180 (317)
                      +.||++|++.|++|
T Consensus       386 ~~Rl~~Y~~~k~~l  399 (401)
T 3g15_A          386 QARFDAYFHQKRKL  399 (401)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999999987

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=100.00  E-value=9.6e-35  Score=282.85  Aligned_cols=160  Identities=35%  Similarity=0.653  Sum_probs=140.2

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCC---CCeEEEEeeccccCCchhhhHHHHHHHhhCCC--------
Q psy8745          25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET---EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS--------   93 (317)
Q Consensus        25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~--------   93 (317)
                      .|.+++++|++.+...+.+.|+||||++++|||++++   ++.+.|||||||++|+|+||||+++++|++..        
T Consensus       201 ~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~~~Dla~~~~~~~~dy~~~~~p~~  280 (379)
T 3feg_A          201 SLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDIGNHFCEWVYDYTHEEWPFY  280 (379)
T ss_dssp             THHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEHHHHHHHHHHHTTEETTCSSTTSC
T ss_pred             HHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCChHHHHHHHHHHHHhhcCCCCCCcc
Confidence            5888999999999888889999999999999999863   36899999999999999999999999998621        


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHhc-CCCCCHHH----HHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHH
Q psy8745          94 PIDHSRYPGPEFQLSWLRTYLEEYT-GSPPSPHQ----LATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASS  168 (317)
Q Consensus        94 ~~d~~~yp~~e~~~~fi~~YL~~y~-~~~~s~~e----v~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~  168 (317)
                      .++++.||+.++|..||+.|++.+. +..+++++    ++.|+.+|+.|.+++|++|++||++|+..|+++|||++||..
T Consensus       281 ~~~~~~yp~~e~q~~fl~~Yl~~~~~~~~~~~~~~~~~~e~l~~~v~~~~~~~~l~W~lWaliq~~~s~idFdy~~Ya~~  360 (379)
T 3feg_A          281 KARPTDYPTQEQQLHFIRHYLAEAKKGETLSQEEQRKLEEDLLVEVSRYALASHFFWGLWSILQASMSTIEFGYLDYAQS  360 (379)
T ss_dssp             EECGGGSCCHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSSCHHHHHHH
T ss_pred             ccCcccCcCHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCCCcCHHHHHHH
Confidence            2466789999999999999999875 34556554    488999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHhhhcCCC
Q psy8745         169 TYQGYVLKRDKYLGTS  184 (317)
Q Consensus       169 R~~~y~~~k~el~~~e  184 (317)
                      ||++|++.|+++...-
T Consensus       361 R~~~y~~~k~~~~~~~  376 (379)
T 3feg_A          361 RFQFYFQQKGQLTSVH  376 (379)
T ss_dssp             HHHHHHHHHHTC----
T ss_pred             HHHHHHHhhhhhhcCC
Confidence            9999999999996543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=100.00  E-value=8.9e-34  Score=279.80  Aligned_cols=159  Identities=26%  Similarity=0.541  Sum_probs=138.1

Q ss_pred             CHHHHHHHHHHHHHHHh----------------cCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHH
Q psy8745          22 GVSQLQSDWQYIETALS----------------KTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH   85 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~----------------~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~   85 (317)
                      +.+.|.+++++|++.+.                ..+.+.|+||||++++||| ++ ++.+.|||||||++|+|+||||++
T Consensus       224 ~~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~-~~~~~~IDwe~a~~~~~~~Dla~~  301 (424)
T 3mes_A          224 LYSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QT-QNNIRMIDYEYSAINFAGADIANY  301 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-EC-SSCEEECCCTTCEEEEHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cC-CCcEEEEecccCCcCChHHHHHHH
Confidence            35678899999999987                4567899999999999999 43 678999999999999999999999


Q ss_pred             HHHhh-CC-------CCCCCCCCCCHHHHHHHHHHHHHHhc--CCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHH--h
Q psy8745          86 FDEFA-GV-------SPIDHSRYPGPEFQLSWLRTYLEEYT--GSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQ--A  153 (317)
Q Consensus        86 ~~E~~-~~-------~~~d~~~yp~~e~~~~fi~~YL~~y~--~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq--~  153 (317)
                      +++|+ .+       ..||++.||+.++|..|++.|++++.  +..+++++++.|+.+|+.|.+++|++|++||++|  +
T Consensus       302 ~~~~~~~y~~~~~p~~~~d~~~yp~~~~~~~fl~~Yl~~~~~~~~~~~~~e~~~l~~~v~~~~~~~~l~W~lWaliq~~~  381 (424)
T 3mes_A          302 FCEYIYDYCSEKQPYFKFKYEDYPCEELRKLFISVYLSQTLQEQVMPSQQIVHIMTKAVEVFTLISHITWGLWSIARTPG  381 (424)
T ss_dssp             HHTTTEECCCSSTTSCEECGGGSCCHHHHHHHHHHHHHHHHCSCCCTTSHHHHHHHHHHHHTHHHHHHHHHHHHHC----
T ss_pred             HHHHHhhcCCCCCCccccccccCcCHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhccc
Confidence            99998 33       35688999999999999999999874  3567889999999999999999999999999999  9


Q ss_pred             hcCC-CCCCHHHHHHHHHHHHHHhHhhhcC
Q psy8745         154 EHSD-IEFDFFQYASSTYQGYVLKRDKYLG  182 (317)
Q Consensus       154 ~~s~-~~fDy~~Ya~~R~~~y~~~k~el~~  182 (317)
                      ..|. ++|||+.||..||++|++.|+++++
T Consensus       382 ~~s~~i~fdy~~Ya~~R~~~y~~~k~~~~~  411 (424)
T 3mes_A          382 YQPNSVEFDFTEYANTRFTHYLQKKKELID  411 (424)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCcCCChHHHHHHHHHHHHHHHHHhcc
Confidence            9999 9999999999999999999999843

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=99.97  E-value=2.9e-31  Score=261.22  Aligned_cols=157  Identities=34%  Similarity=0.643  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCC---------------------------CCeEEEEeeccccC
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET---------------------------EDKVTFIDYEYAGV   75 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~---------------------------~~~l~lIDfEya~~   75 (317)
                      ...|.++++++++.+.....+.||||||++++|||++++                           .+.+.|||||||++
T Consensus       228 ~~~l~~~~~~l~~~l~~~~~~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~  307 (429)
T 1nw1_A          228 CLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY  307 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHhccccCCCeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence            578899999999999877889999999999999999763                           15799999999999


Q ss_pred             CchhhhHHHHHHHhhCCC--------CCCCCCCCCHHHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhhhhhhhhhHHHH
Q psy8745          76 NYQAFDIANHFDEFAGVS--------PIDHSRYPGPEFQLSWLRTYLEEYTGS--PPSPHQLATLHWQVQQFSPVAHCFW  145 (317)
Q Consensus        76 n~~~fDiAn~~~E~~~~~--------~~d~~~yp~~e~~~~fi~~YL~~y~~~--~~s~~ev~~l~~~v~~~~l~shl~W  145 (317)
                      |+|+||||++|++|+...        .++++.||+.+++..|++.|++.+...  +.++++++.++.+|..|.+++|++|
T Consensus       308 g~p~~DLA~~~~e~~~~~~~~~~p~~~~~~~~~p~~~~~~~fl~~Y~~~~~~~~~~~~~~~~~~l~~~v~~~~~~~~l~W  387 (429)
T 1nw1_A          308 NYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFW  387 (429)
T ss_dssp             EEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHHHHHHHHHHHHHHHTCSCGGGHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred             CccHHHHHHHHHHHhcccCCccCCCcccCcccCcCHHHHHHHHHHHHHhcCCccCcchHHHHHHHHHHHHHHHhhhhHHH
Confidence            999999999999997421        134556899999999999999987521  1135678999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhh
Q psy8745         146 TIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKY  180 (317)
Q Consensus       146 ~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el  180 (317)
                      ++|+++|+..|+++|||+.||+.||.+|++.| ++
T Consensus       388 ~lWaliq~~~s~~dfdy~~ya~~R~~~y~~~k-~~  421 (429)
T 1nw1_A          388 GVWGLLQVELSPVGFGFADYGRDRLSLYFKHK-QL  421 (429)
T ss_dssp             HHHHHHHHHHCCSSSCHHHHHHHHHHHHHHTH-HH
T ss_pred             HHHHHHhCcCCCCCcCHHHHHHHHHHHHHHHH-HH
Confidence            99999999999999999999999999999999 44

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=99.97  E-value=4e-31  Score=263.03  Aligned_cols=150  Identities=33%  Similarity=0.594  Sum_probs=132.6

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeC------------------------------------CCCeE
Q psy8745          22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDE------------------------------------TEDKV   65 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~------------------------------------~~~~l   65 (317)
                      +.+.|.+++.+|++.+.....+.||||||++++|||++.                                    .++.+
T Consensus       268 ~~~~l~~~~~~L~~~l~~~~~~~v~cHnDl~~gNIL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  347 (458)
T 2qg7_A          268 DFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGGGEAGELGEAGETGEGGETGEGGETGEGGETGEGGEGDSI  347 (458)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCEEEECSCCCGGGEEECCC-----------------------------------CCCCE
T ss_pred             CHHHHHHHHHHHHHHhhhccCCeeEEecCCCCCcEEeecccccccccccccccccccccccccccccccccccCCCCCeE
Confidence            367889999999999987788999999999999999971                                    24679


Q ss_pred             EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHH
Q psy8745          66 TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFW  145 (317)
Q Consensus        66 ~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W  145 (317)
                      .|||||||++|+|+||||+||++|+++ +++++.||+.+++..|++.|++.+     ++++++.|+.+|..|.+++|++|
T Consensus       348 ~lIDfEya~~gdp~~DLA~~~~ew~~~-~~d~~~~P~~~~~~~fl~~Y~~~~-----~~~e~~~L~~ev~~~~~~~~l~W  421 (458)
T 2qg7_A          348 SFIDFEYSCPMERAYDIANHFNEYAGF-NCDWDLTPSKEEEYHFIMHYLGTD-----DEELINQLIREIQPFYICSHINW  421 (458)
T ss_dssp             EECCCTTCEEEEHHHHHHHHHHGGGTT-TTCGGGSCCHHHHHHHHHHHHTCC-----CHHHHHHHHHHHTTHHHHHHHHH
T ss_pred             EEEeecCCCCCCcHHHHHHHHHHhccc-ccccccCCCHHHHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999854 368888999999999999999763     68899999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhH
Q psy8745         146 TIWGLVQAEHSDIEFDFFQYASSTYQGYVLKR  177 (317)
Q Consensus       146 ~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k  177 (317)
                      ++|+++|+..|.++|||+.||..||.+|...+
T Consensus       422 ~lWaliq~~~s~idfdy~~ya~~Rl~~y~~~~  453 (458)
T 2qg7_A          422 GLWSLLQGMHSSIDFDFINYGMTRLTASCLPI  453 (458)
T ss_dssp             HHHHHHHTTCC---CCHHHHHHHHHHHTTSHH
T ss_pred             HHHHHHHhhcCCCCcCHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999996543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=99.97  E-value=3e-30  Score=246.62  Aligned_cols=162  Identities=29%  Similarity=0.494  Sum_probs=134.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHhc------CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCC
Q psy8745          19 FPGGVSQLQSDWQYIETALSK------TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV   92 (317)
Q Consensus        19 ~p~~~~~L~~e~~~L~~~l~~------~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~   92 (317)
                      ++.+...+.++++++.+.+..      ...+.|+||||++++|||+++  +++.|||||||++|+|+||||+++++++..
T Consensus       181 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~HgDl~~~Nil~~~--~~~~lID~e~a~~g~~~~Dla~~~~~~~~~  258 (369)
T 3c5i_A          181 YNCDIHKYIKESDKFIKFMKVYSKSDNLANTIVFCHNDLQENNIINTN--KCLRLIDFEYSGFNFLATDIANFFIETSID  258 (369)
T ss_dssp             C-CCHHHHHHHHHHHHHHHHHHTTSSCGGGCEEEECSCCCGGGEEECC---CEEECCCTTCEEEEHHHHHHHHHHGGGEE
T ss_pred             HHhhHHHHHHHHHHHHHHHHHhhhhcccCCCeEEEeCCCCcccEEecC--CcEEEEEecCCCCCchHHHHHHHHHHHhhh
Confidence            434567788888877777653      456799999999999999964  559999999999999999999999998741


Q ss_pred             -C-------CCCCCCCCCHHHHHHHHHHHHHHhcC---CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhc--CCCC
Q psy8745          93 -S-------PIDHSRYPGPEFQLSWLRTYLEEYTG---SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEH--SDIE  159 (317)
Q Consensus        93 -~-------~~d~~~yp~~e~~~~fi~~YL~~y~~---~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~--s~~~  159 (317)
                       +       .+|++.||+.+++..|++.|++.|.+   ..+++++++.++.+|+.|.+++|++|++||++|+..  +.++
T Consensus       259 ~~~~~~p~~~~d~~~~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~W~lWa~~q~~~~~~~~~  338 (369)
T 3c5i_A          259 YSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKSLVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNE  338 (369)
T ss_dssp             CCCCSTTCCEECGGGSCCHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred             cCCCCCCccccchhhCcCHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCcccCCCCC
Confidence             1       23567789999999999999999863   246788999999999999999999999999999976  4569


Q ss_pred             CCHHHHHHHHHHHHHHhHhhhcC
Q psy8745         160 FDFFQYASSTYQGYVLKRDKYLG  182 (317)
Q Consensus       160 fDy~~Ya~~R~~~y~~~k~el~~  182 (317)
                      |||+.||+.||++|++.|+++.+
T Consensus       339 fdy~~ya~~r~~~y~~~k~~~~~  361 (369)
T 3c5i_A          339 FDFFLYAEQRLKMYDDQKEYLIS  361 (369)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999843

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=99.92  E-value=1.2e-24  Score=202.30  Aligned_cols=141  Identities=22%  Similarity=0.413  Sum_probs=120.4

Q ss_pred             cCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCC
Q psy8745          18 LFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDH   97 (317)
Q Consensus        18 ~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~   97 (317)
                      .+|.+.+.+.+++.++.+.+.....+.|+||||++++|||.+  ++++.|||||||++|+|++|||++++++.       
T Consensus       147 ~~~~~~~~l~~~~~~l~~~l~~~~~~~~l~HgDl~~~Nil~~--~~~~~lID~e~a~~g~~~~Dla~~~~~~~-------  217 (301)
T 3dxq_A          147 TLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDT--GERMWIVDWEYSGMNDPLWDLGDLSVEGK-------  217 (301)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHHSSCCCCEEECSCCCGGGEEEC--SSCEEECCCTTCEEECTHHHHHHHHHHTT-------
T ss_pred             CchhhHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCEEEC--CCCEEEEecccccCCCHHHHHHHHHHHhC-------
Confidence            455568889999999999988878899999999999999943  57799999999999999999999998742       


Q ss_pred             CCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhH
Q psy8745          98 SRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKR  177 (317)
Q Consensus        98 ~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k  177 (317)
                         .+.+++..|++.|++..    .++.+    ..++..|.++++++|++|+++|+..+.++|||.+||..|+++|+...
T Consensus       218 ---~~~~~~~~~l~~Y~~~~----~~~~~----~~~~~~~~~~~~~~w~~W~~~q~~~~~~~~d~~~ya~~r~~~~~~~~  286 (301)
T 3dxq_A          218 ---FNANQDEELMRAYFGGE----ARPAE----RGRVVIYKAMCDLLWTLWGLIQLANDNPVDDFRAYADGRFARCKALM  286 (301)
T ss_dssp             ---CCHHHHHHHHHHHHTSC----CCHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHhCCC----CCHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHh
Confidence               24677888999998752    34443    34567899999999999999999999999999999999999997665


Q ss_pred             h
Q psy8745         178 D  178 (317)
Q Consensus       178 ~  178 (317)
                      .
T Consensus       287 ~  287 (301)
T 3dxq_A          287 E  287 (301)
T ss_dssp             H
T ss_pred             c
Confidence            4

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=99.39  E-value=1.8e-13  Score=132.73  Aligned_cols=91  Identities=23%  Similarity=0.400  Sum_probs=78.0

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC-CCCC-cchHHHHHHHhhcc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN-MKTP-KLWSTGKHMLSLIP  263 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~-~~~p-~lw~~i~kwl~~~~  263 (317)
                      ..+..|++.|+||+|||+|+||+|++|++|++|+++++++|.+++.||++||+||.+..+ ++.| .+|..+.+|+..+.
T Consensus       126 ~~~~~ls~~g~~p~l~~~f~~g~i~e~i~g~~l~~~~~~~~~~~~~ia~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~  205 (401)
T 3g15_A          126 VMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVL  205 (401)
T ss_dssp             HHHHHHHHTTSSCCEEEEETTEEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCEEEEEECCcEEEEecCCCcCChhhhcCHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999999999999999999876 3444 48999999999887


Q ss_pred             cc-CCCchhhhhhh
Q psy8745         264 RT-YSNPDKQERYC  276 (317)
Q Consensus       264 ~~-f~d~~k~~~~~  276 (317)
                      .. +.+..+.+++.
T Consensus       206 ~~~~~~~~~~~~~~  219 (401)
T 3g15_A          206 RIKFTEESRIKKLH  219 (401)
T ss_dssp             HCCCCSHHHHHHHH
T ss_pred             hhccccHHHHHHHH
Confidence            65 44554444443

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=99.32  E-value=5.2e-12  Score=116.84  Aligned_cols=97  Identities=14%  Similarity=0.148  Sum_probs=75.1

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCC
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSP  121 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~~  121 (317)
                      .+.++||||++++|||+++ ++.+.|||||+|++++|.+|||.++..++.. ..++    +.+....|++.|.+.   .+
T Consensus       220 ~~~~l~HgD~~~~Nil~~~-~~~~~lIDfe~a~~g~~~~Dla~~l~~~~~~-~~~~----~~~~~~~~l~~Y~~~---~~  290 (346)
T 2q83_A          220 KSPNLCHQDYGTGNTLLGE-NEQIWVIDLDTVSFDLPIRDLRKMIIPLLDT-TGVW----DDETFNVMLNAYESR---AP  290 (346)
T ss_dssp             HSCCEECSSCSTTSEEECG-GGCEEECCCTTCEECCTHHHHHHHHHHHTCC-SSCC----CHHHHHHHHHHHHHH---SC
T ss_pred             ccCceecCCCCcccEEEeC-CCcEEEEehhhcccCChHHHHHHHHHHHHHh-cCCC----CHHHHHHHHHHHhhc---CC
Confidence            5789999999999999965 4679999999999999999999999886421 0111    356778899999876   46


Q ss_pred             CCHHHHHHHHHhhhhhhhhhHHHHHHHHHH
Q psy8745         122 PSPHQLATLHWQVQQFSPVAHCFWTIWGLV  151 (317)
Q Consensus       122 ~s~~ev~~l~~~v~~~~l~shl~W~lWali  151 (317)
                      +++++.+.++    .+.++++.+|.++--+
T Consensus       291 l~~~e~~~l~----~~~~~~~~~~~~~~~y  316 (346)
T 2q83_A          291 LTEEQKQVMF----IDMLFPYELYDVIREK  316 (346)
T ss_dssp             CCHHHHHHHH----HHHHSCHHHHHHHHHH
T ss_pred             CCHHHHHHHH----HHHHCHHHHHHHHHHH
Confidence            7888877665    4566777777776543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=99.27  E-value=2.4e-11  Score=112.62  Aligned_cols=101  Identities=19%  Similarity=0.294  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCH
Q psy8745          25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGP  103 (317)
Q Consensus        25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~  103 (317)
                      .+.+.++++.+.... ..+.++||||++++|||+++  +++ .|||||+|+++++.+|||.+++.|+......    .+.
T Consensus       169 ~l~~~~~~l~~~~~~-~~~~~liHgDl~~~Nil~~~--~~~~~lIDf~~a~~g~~~~Dla~~l~~~~~~~~~~----~~~  241 (322)
T 2ppq_A          169 EIRPEIDYLAAHWPK-DLPAGVIHADLFQDNVFFLG--DELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGA----YNV  241 (322)
T ss_dssp             HHHHHHHHHHHHCCC-SSCEEEECSCCCGGGEEEET--TEEEEECCCTTCEEEEHHHHHHHHHHHHSBCTTSC----BCH
T ss_pred             HHHHHHHHHHhhCcc-cCCcccCCCCCCccCEEEeC--CceEEEecchhccCchhHHHHHHHHHHHHcCCCCC----CCH
Confidence            355666666654433 57899999999999999985  455 6999999999999999999998876421111    235


Q ss_pred             HHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhh
Q psy8745         104 EFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQ  135 (317)
Q Consensus       104 e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~  135 (317)
                      +....|++.|.+.   ++++++|++.+..-+.
T Consensus       242 ~~~~~~l~~Y~~~---~~l~~~e~~~l~~~~~  270 (322)
T 2ppq_A          242 TKGKALLEGYQSV---RPLSEAELEALPLLSR  270 (322)
T ss_dssp             HHHHHHHHHHHTT---SCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc---CCCCHHHHHHHHHHHH
Confidence            6677888888875   4678888887765443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=99.25  E-value=4.3e-12  Score=123.22  Aligned_cols=81  Identities=28%  Similarity=0.455  Sum_probs=74.6

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC-CCCCc-chHHHHHHHhhcc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN-MKTPK-LWSTGKHMLSLIP  263 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~-~~~p~-lw~~i~kwl~~~~  263 (317)
                      .+++.|++.|++|++||.|+||+|++||+|++|+++++++|.+.+.||+.||+||.+.++ ++.|. +|..|.+|++++.
T Consensus       105 ~vl~~L~~~gv~P~ll~~~~~g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~  184 (379)
T 3feg_A          105 VMFAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQ  184 (379)
T ss_dssp             HHHHHHHHTTSSCCEEEEETTEEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeEEEEcCCccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHH
Confidence            566789999999999999999999999999999999999999999999999999999877 56777 9999999999887


Q ss_pred             ccC
Q psy8745         264 RTY  266 (317)
Q Consensus       264 ~~f  266 (317)
                      ...
T Consensus       185 ~~~  187 (379)
T 3feg_A          185 DLP  187 (379)
T ss_dssp             HCC
T ss_pred             hcc
Confidence            653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=99.19  E-value=3.6e-11  Score=111.67  Aligned_cols=131  Identities=14%  Similarity=0.147  Sum_probs=84.8

Q ss_pred             HHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHH
Q psy8745          29 DWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLS  108 (317)
Q Consensus        29 e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~  108 (317)
                      .++.+++.+.. ..+.++||||++++|||++  + .+.|||||+|+++++.+|||.+++.             .......
T Consensus       181 ~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~--~-~~~lIDfe~a~~g~~~~Dla~~l~~-------------~~~~~~~  243 (328)
T 1zyl_A          181 LIAAVTAHWRE-DFTVLRLHGDCHAGNILWR--D-GPMFVDLDDARNGPAVQDLWMLLNG-------------DKAEQRM  243 (328)
T ss_dssp             HHHHHHHHCCS-CSCCEECCSSCSGGGEEES--S-SEEECCCTTCCEECTTHHHHTTCCS-------------SHHHHHH
T ss_pred             HHHHHHHHhhh-cCCeeeeeCCCCcccEeEc--C-CCEEEECCCCCcCcHHHHHHHHhcC-------------ChHHHHH
Confidence            34445544433 4678999999999999997  2 7999999999999999999986421             1122333


Q ss_pred             HHHHHHHHhcC-CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCC-----CCCCHHHHHHHHHHHHHHhHhhh
Q psy8745         109 WLRTYLEEYTG-SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSD-----IEFDFFQYASSTYQGYVLKRDKY  180 (317)
Q Consensus       109 fi~~YL~~y~~-~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~-----~~fDy~~Ya~~R~~~y~~~k~el  180 (317)
                      ..+.+++.|.. ..+++++++.+    ..+..+..+.|..|.........     ..+....|...+...+.++...+
T Consensus       244 ~~~~~l~~Y~~~~~l~~~e~~~l----~~~~~~r~l~~~~w~~~~~~d~~f~~~~p~~~~~~yw~~~~~~~~~~~~~~  317 (328)
T 1zyl_A          244 QLETIIEAYEEFSEFDTAEIGLI----EPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVL  317 (328)
T ss_dssp             HHHHHHHHHTTTSCCCGGGGGGH----HHHHHHHHHHHHHHHHHTTTSTHHHHHCGGGGSHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHH----HHHHHHHHHHHHHHHHhccCCccccccCCCCCchhHHHHHHHHHHHHHHHh
Confidence            34444554432 34566665543    34566777888888655443210     12344557777777777766665

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=99.18  E-value=1.4e-11  Score=122.35  Aligned_cols=80  Identities=25%  Similarity=0.513  Sum_probs=72.3

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC---------------CCCCc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN---------------MKTPK  250 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~---------------~~~p~  250 (317)
                      .+++.|+++|++|++||+|+||+|++||+|++|++.++++|.+++.||+.||+||.+.++               ...|.
T Consensus       156 ~vl~~L~~~gl~P~ll~~~~~G~v~e~I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~~~~l~~~~~~~~~~~~~  235 (458)
T 2qg7_A          156 KISCILYNKNIAKKIYVFFTNGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNENLYKELQVTQKVPGTRPSF  235 (458)
T ss_dssp             HHHHHHTTSSSBCCEEEEETTEEEEECCCSEECCTTTTTSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTCCSSSCCS
T ss_pred             HHHHHHHhcCCCCCEEEEeCCeEEEEeeCCccCChhhcCCHHHHHHHHHHHHHHhcCCccccchhcccccccccCCCCcc
Confidence            457889999999999999999999999999999999999999999999999999998765               24567


Q ss_pred             chHHHHHHHhhcccc
Q psy8745         251 LWSTGKHMLSLIPRT  265 (317)
Q Consensus       251 lw~~i~kwl~~~~~~  265 (317)
                      +|..|++|+..++..
T Consensus       236 ~~~~i~~w~~~~~~~  250 (458)
T 2qg7_A          236 LWNTIWKYFHLLNEE  250 (458)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987654

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=99.16  E-value=1.2e-11  Score=121.77  Aligned_cols=81  Identities=25%  Similarity=0.338  Sum_probs=74.3

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC-----C---CCCCcchHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS-----N---MKTPKLWSTGKH  257 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~-----~---~~~p~lw~~i~k  257 (317)
                      .+++.|++.|++|++||.|+||+|++||+|++|+++++++|.+++.||+.||+||.+.+     |   +++|.+|..|.+
T Consensus       125 ~~l~~L~~~gi~P~l~~~~~~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~  204 (424)
T 3mes_A          125 DVFRYLSNINIAPNIIADFPEGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYL  204 (424)
T ss_dssp             HHHHHHHHTTSSCCEEEEETTEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHH
T ss_pred             HHHHHHHhcCCCCCEEEEcCCCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHH
Confidence            55678999999999999999999999999999999999999999999999999999876     4   578889999999


Q ss_pred             HHhhccccC
Q psy8745         258 MLSLIPRTY  266 (317)
Q Consensus       258 wl~~~~~~f  266 (317)
                      |+++++...
T Consensus       205 w~~~~~~~~  213 (424)
T 3mes_A          205 WREEAKIQV  213 (424)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999887753

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=99.15  E-value=2.2e-11  Score=119.55  Aligned_cols=80  Identities=23%  Similarity=0.399  Sum_probs=73.3

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC-CCCCc-chHHHHHHHhhcc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN-MKTPK-LWSTGKHMLSLIP  263 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~-~~~p~-lw~~i~kwl~~~~  263 (317)
                      .+++.|+++|++|++||+|+||+|++||+|++|+.+++++|.+++.||+.||+||.+..+ ++.|. +|..+.+|+..++
T Consensus       127 ~~l~~L~~~g~~P~l~~~~~~g~v~e~l~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~~~~~~~~~i~~w~~~~~  206 (429)
T 1nw1_A          127 VIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLT  206 (429)
T ss_dssp             HHHHHHHHTTSSSCEEEEETTEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCcEEEEeCCCEEEEEeCCcccChhhcCCHHHHHHHHHHHHHHhCCccccCCCcchHHHHHHHHHHHHH
Confidence            567889999999999999999999999999999999999999999999999999998766 46788 9999999998876


Q ss_pred             cc
Q psy8745         264 RT  265 (317)
Q Consensus       264 ~~  265 (317)
                      ..
T Consensus       207 ~~  208 (429)
T 1nw1_A          207 GT  208 (429)
T ss_dssp             HH
T ss_pred             hh
Confidence            54

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=99.02  E-value=1.2e-09  Score=101.99  Aligned_cols=93  Identities=16%  Similarity=0.308  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCC---CCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCC
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET---EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPG  102 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~  102 (317)
                      +.+.++++.+.+.  ..+.++||+|++++|||++++   .+.+.|||||+|++++|.+|||.++.. +      +..+ .
T Consensus       167 l~~~~~~l~~~~~--~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~~DLa~ll~~-~------~~~~-~  236 (333)
T 3csv_A          167 FEHRFAQILSAQL--EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRAYDLVSLLQD-A------RRDV-P  236 (333)
T ss_dssp             HHHHHHHHHHHHC--CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTTHHHHHHHSC-T------TSCC-C
T ss_pred             HHHHHHHHHHhcc--cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCHHHHHHHhhc-c------cccC-C
Confidence            3333444444332  357899999999999999752   157899999999999999999987642 1      1111 3


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy8745         103 PEFQLSWLRTYLEEYTGSPPSPHQLATLH  131 (317)
Q Consensus       103 ~e~~~~fi~~YL~~y~~~~~s~~ev~~l~  131 (317)
                      .+....|++.|.+..   .++.++....+
T Consensus       237 ~~~~~~~l~~Y~~~~---~~~~~~~~~~~  262 (333)
T 3csv_A          237 AQVEAQMIDHYIQAT---GVDESHFRSAY  262 (333)
T ss_dssp             HHHHHHHHHHHHHHH---TCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc---CCCHHHHHHHH
Confidence            577888999999886   24555544444

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.99  E-value=7.1e-10  Score=104.27  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=53.4

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCC----CCCCCCCCHHHHHHHHHHHHHHh
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSP----IDHSRYPGPEFQLSWLRTYLEEY  117 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~----~d~~~yp~~e~~~~fi~~YL~~y  117 (317)
                      +.++||+|++++|||+++ ++.+.|||||+|++++|.+|||.++..+....+    .....+|....+..|++.|.+..
T Consensus       221 ~~~l~HgDl~~~Nil~~~-~~~~~vIDwe~a~~g~p~~Dla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~  298 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRD-FQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALT  298 (357)
T ss_dssp             CCEEECSSCSGGGEEEET-TEEEEECCGGGCEEECHHHHHHHHHHHHHHHHHHHHHTTCCCCTTSSCHHHHHHHHHHHH
T ss_pred             CceEEeCCCCCCeEEEeC-CcEEEEEcccccccCCcHHHHHHHHhhcccccccccccCCCCCCCcccHHHHHHHHHHHh
Confidence            789999999999999984 334679999999999999999998776532100    00011222111668999999876

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.99  E-value=1e-09  Score=102.32  Aligned_cols=94  Identities=16%  Similarity=0.244  Sum_probs=67.8

Q ss_pred             CCCeeeeecCCCCCCeeeeC--CCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8745          41 KSPVVFCHNDLLLGNIIYDE--TEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY  117 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~--~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y  117 (317)
                      ..+.++||+|++++|||+++  .++++ .|||||++++++|.+|+|..+..+            .++....|++ |... 
T Consensus       187 ~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~~Dla~~~~~~------------~~~~~~~~~~-Y~~~-  252 (306)
T 3tdw_A          187 RYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDC------------GELFTRQVMA-YRGE-  252 (306)
T ss_dssp             CCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGGGGGHHHHHHT------------CHHHHHHHHH-HTTC-
T ss_pred             cCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHHHHHHHHHHhc------------CHHHHHHHHH-hccc-
Confidence            37889999999999999975  12455 699999999999999999876431            2455555665 5542 


Q ss_pred             cCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhc
Q psy8745         118 TGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEH  155 (317)
Q Consensus       118 ~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~  155 (317)
                          ....+.   ...+..|..++.+.|.+|++.+...
T Consensus       253 ----~~~~~~---~~r~~~~~~~~~l~~~~~~~~~~~~  283 (306)
T 3tdw_A          253 ----VDLDTH---IRKVSLFVTFDQVSYLLEGLRARDQ  283 (306)
T ss_dssp             ----SCHHHH---HHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             ----ccCCCH---HHHHHHHHHHHHHHHHHHHHHcCCH
Confidence                121111   4455677888888999999987753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.96  E-value=1.4e-09  Score=96.31  Aligned_cols=58  Identities=24%  Similarity=0.339  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEE-EEeeccccCCchhhhHHHHHHH
Q psy8745          28 SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVT-FIDYEYAGVNYQAFDIANHFDE   88 (317)
Q Consensus        28 ~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~-lIDfEya~~n~~~fDiAn~~~E   88 (317)
                      +.++++.+.+. ...+.++||+|++++|||+++  +++. |||||+|++++|.+|+|.++..
T Consensus       169 ~~~~~l~~~~~-~~~~~~l~HgDl~~~Nil~~~--~~~~~liD~~~a~~g~~~~Dla~~~~~  227 (264)
T 1nd4_A          169 ELFARLKARMP-DGEDLVVTHGDACLPNIMVEN--GRFSGFIDCGRLGVADRYQDIALATRD  227 (264)
T ss_dssp             HHHHHHHHTCC-SSCCEEEECSSCCGGGEEEET--TEEEEECCCTTCEEEETHHHHHHHHHH
T ss_pred             HHHHHHHHhcC-CCCCeEEECCCCCCCcEEEEC--CcEEEEEcchhcccCChHHHHHHHHhh
Confidence            33344444332 356789999999999999975  4555 9999999999999999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.94  E-value=7.3e-10  Score=99.48  Aligned_cols=45  Identities=36%  Similarity=0.453  Sum_probs=40.1

Q ss_pred             CCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHH
Q psy8745          42 SPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDE   88 (317)
Q Consensus        42 ~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E   88 (317)
                      .+.|+||+|++++|||+++  +++ .|||||+|++++|.+|||..+..
T Consensus       181 ~~~~l~HgDl~~~Nil~~~--~~~~~lIDwe~a~~gd~~~Dla~~~~~  226 (263)
T 3tm0_A          181 EELVFSHGDLGDSNIFVKD--GKVSGFIDLGRSGRADKWYDIAFCVRS  226 (263)
T ss_dssp             CCEEEECSSCCTTSEEEET--TEEEEECCCTTCEEEEHHHHHHHHHHH
T ss_pred             CCceEECCCCCcCcEEEEC--CcEEEEEEchhcccCCHHHHHHHHHHH
Confidence            6799999999999999975  455 59999999999999999998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.92  E-value=3.5e-09  Score=95.33  Aligned_cols=48  Identities=27%  Similarity=0.405  Sum_probs=40.6

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      ..+.|+||+|++++|||+++ ++.+.|||||.|++++|.+|||.....+
T Consensus       190 ~~~~~l~HGDl~~~Nil~~~-~~~~~viDwe~a~~gdp~~Dla~~~~~~  237 (272)
T 4gkh_A          190 SPDSVVTHGDFSLDNLIFDE-GKLIGCIDVGRVGIADRYQDLAILWNCL  237 (272)
T ss_dssp             CCCEEEECSCCCTTSEEEET-TEEEEECCCTTCEEEETHHHHHHHHHHH
T ss_pred             cCCcEEEcCCCCCCeEEEEC-CeEEEEEECcccccCCHHHHHHHHHHHh
Confidence            46789999999999999985 3344599999999999999999875543

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.92  E-value=9.9e-10  Score=101.46  Aligned_cols=96  Identities=20%  Similarity=0.231  Sum_probs=62.9

Q ss_pred             CCCCeeeeecCCCCCCeeeeCCCC-eEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Q psy8745          40 TKSPVVFCHNDLLLGNIIYDETED-KVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT  118 (317)
Q Consensus        40 ~~~~~v~CHnDl~~~NiL~~~~~~-~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~  118 (317)
                      ...+.++||+|++++|||++++++ .+.+||||++++++|.+|+|.++...        ..+ +.+....|++.|    .
T Consensus       187 ~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~--------~~~-~~~~~~~~l~~Y----~  253 (304)
T 3sg8_A          187 FKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDD--------EEY-GMEFVSKILNHY----K  253 (304)
T ss_dssp             TCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTT--------TSC-CHHHHHHHHHHH----T
T ss_pred             ccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhc--------ccc-CHHHHHHHHHHc----C
Confidence            356789999999999999986324 46699999999999999999864321        011 244444455555    2


Q ss_pred             CCCCC-HHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745         119 GSPPS-PHQLATLHWQVQQFSPVAHCFWTIWGLVQAE  154 (317)
Q Consensus       119 ~~~~s-~~ev~~l~~~v~~~~l~shl~W~lWaliq~~  154 (317)
                       . .+ ++    +...+..+..+-.+-|.+|++....
T Consensus       254 -~-~~~~~----~~~r~~~~~~~~~l~~~~~~~~~g~  284 (304)
T 3sg8_A          254 -H-KDIPT----VLEKYRMKEKYWSFEKIIYGKEYGY  284 (304)
T ss_dssp             -C-SCHHH----HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             -C-CCcHH----HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence             2 22 22    2233345555556678888776653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.92  E-value=9.5e-10  Score=103.78  Aligned_cols=72  Identities=18%  Similarity=0.292  Sum_probs=53.6

Q ss_pred             CeeeeecCCCCCCeeeeCCCCe-EEEEeeccccCCchhhhHHHHHHHhhCCCC--CCCC-------CCCCHHHHHHHHHH
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDK-VTFIDYEYAGVNYQAFDIANHFDEFAGVSP--IDHS-------RYPGPEFQLSWLRT  112 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~-l~lIDfEya~~n~~~fDiAn~~~E~~~~~~--~d~~-------~yp~~e~~~~fi~~  112 (317)
                      +.++||+|++++|||+++++.+ +.|||||+|++++|.+|||.++..|....+  ....       .+|+   +.+|++.
T Consensus       215 ~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p~~DLa~~l~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~l~~  291 (359)
T 3dxp_A          215 LTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPD---EASYRKL  291 (359)
T ss_dssp             CCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECHHHHHHHHGGGGTSCSSSSCCCTTSCHHHHTCCC---HHHHHHH
T ss_pred             CceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCHHHHHHHHHHHhccCccccccccCCCccCCCCCC---HHHHHHH
Confidence            5899999999999999863334 579999999999999999999876543110  0011       2233   5678999


Q ss_pred             HHHHh
Q psy8745         113 YLEEY  117 (317)
Q Consensus       113 YL~~y  117 (317)
                      |.+..
T Consensus       292 Y~~~~  296 (359)
T 3dxp_A          292 YEQRT  296 (359)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99876

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=98.88  E-value=7.2e-10  Score=104.96  Aligned_cols=77  Identities=17%  Similarity=0.289  Sum_probs=54.8

Q ss_pred             HHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHH
Q psy8745          31 QYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWL  110 (317)
Q Consensus        31 ~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi  110 (317)
                      +.+.+.+.....+.++||+|++++|||+++ ++.+.+||||++++++|.+|||.++....       ....+.+....|+
T Consensus       193 ~~l~~~l~~~~~~~~~~HgD~~~~N~l~~~-~~~~~~iD~e~~~~~~~~~Dla~~~~~~~-------~~~~~~~~~~~fl  264 (339)
T 3i1a_A          193 EKLSKKIQPDLDKYVLCHSDIHAGNVLVGN-EESIYIIDWDEPMLAPKERDLMFIGGGVG-------NVWNKPHEIQYFY  264 (339)
T ss_dssp             HHHHHHCCCCGGGCEEECSCCCGGGEEECG-GGCEEECCCSSCEEECTHHHHTTTTCCTT-------SCSCCHHHHHHHH
T ss_pred             HHHHHHHhhCCCCceeEeCCCCcCCEEEeC-CCeEEEEECCCCeeCCHHHHHHHHHhhhh-------hccCCHHHHHHHH
Confidence            333334444456889999999999999975 46799999999999999999998643211       0111345566777


Q ss_pred             HHHHH
Q psy8745         111 RTYLE  115 (317)
Q Consensus       111 ~~YL~  115 (317)
                      +.|..
T Consensus       265 ~~Y~~  269 (339)
T 3i1a_A          265 EGYGE  269 (339)
T ss_dssp             HHHCC
T ss_pred             HHhCC
Confidence            77753

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.87  E-value=1.3e-09  Score=105.65  Aligned_cols=60  Identities=20%  Similarity=0.358  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      +...+.++.+.+..  .+.++||||++++|||+++  +++.|||||+|++++|++|||.+++++
T Consensus       216 l~~~~~~l~~~~~~--~~~~liHGDl~~~Nil~~~--~~~~lID~e~a~~G~p~~Dla~~l~~~  275 (420)
T 2pyw_A          216 LKLEIAELKSMFCE--RAQALIHGDLHTGSVMVTQ--DSTQVIDPEFSFYGPMGFDIGAYLGNL  275 (420)
T ss_dssp             HHHHHHHHHHHHHH--BCCEEECSCCSGGGEEECS--SCEEECCCTTCEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc--CCCeEEecCCCCCcEEEeC--CCCEEEeCcccccCchHHHHHHHHHHH
Confidence            44556666655544  5789999999999999975  349999999999999999999998764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.86  E-value=1.6e-09  Score=103.75  Aligned_cols=60  Identities=22%  Similarity=0.306  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh
Q psy8745          27 QSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA   90 (317)
Q Consensus        27 ~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~   90 (317)
                      ...+..+.+.+..  .+.|+||||++++|||+++  +++.+||||+|++++|++|||.+++++.
T Consensus       212 ~~~~~~l~~~~~~--~~~~L~HGDl~~~Nil~~~--~~~~lID~e~a~~G~p~~DLa~~l~~~~  271 (397)
T 2olc_A          212 KIEAAKLKKSFLT--SAETLIHGDLHTGSIFASE--HETKVIDPEFAFYGPIGFDVGQFIANLF  271 (397)
T ss_dssp             HHHHHHHHHHHHH--BCCEEECSCCSGGGEEECS--SCEEECCCTTCEEECTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcc--CCCceeeCCCCcCcEEEeC--CCeEEEeCcccccCChHHhHHHHHHHHH
Confidence            3444445443332  4679999999999999974  4699999999999999999999987753

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=98.70  E-value=5.9e-09  Score=98.96  Aligned_cols=79  Identities=16%  Similarity=0.345  Sum_probs=69.5

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC----C---CCCCcchHHHHHH
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS----N---MKTPKLWSTGKHM  258 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~----~---~~~p~lw~~i~kw  258 (317)
                      ..++.|+++|++|++|+.++||+|++||+|++++..++.+|.+.+.+|+.||+||.+..    +   ++.|.+|..+.+|
T Consensus        89 ~~l~~L~~~g~~P~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~a~~La~lH~~~~~~~~~~~~~~~p~~~~~~~~~  168 (369)
T 3c5i_A           89 EVYKTMSKYKIAPQLLNTFNGGRIEEWLYGDPLRIDDLKNPTILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKW  168 (369)
T ss_dssp             HHHHHHHHTTSSCCEEEEETTEEEEECCCSEECCGGGGGCHHHHHHHHHHHHHHHTHHHHSCCCTTSCCSCHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCceEEecCCcEEEEEecCCcCChhhcCChHHHHHHHHHHHHHHcCcccccCcccCCCCCcHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999998643    2   3567789999999


Q ss_pred             Hhhccc
Q psy8745         259 LSLIPR  264 (317)
Q Consensus       259 l~~~~~  264 (317)
                      +..+..
T Consensus       169 ~~~~~~  174 (369)
T 3c5i_A          169 KNQLFK  174 (369)
T ss_dssp             HHHHTT
T ss_pred             HHHHhh
Confidence            987754

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.48  E-value=5.4e-08  Score=89.74  Aligned_cols=80  Identities=15%  Similarity=0.257  Sum_probs=69.4

Q ss_pred             CcchhhhhcCCCCceEEEec--CceEEEee-cCccCCCCCCCC-cccHHHHHHHHHhhcccCCC-CCCCcchHHHHHHHh
Q psy8745         186 PSPQILHRAGLAPRLYAEFD--NGLVYQYV-RGVTITPDSIRE-PHIHPLVARNMARLHKVHSN-MKTPKLWSTGKHMLS  260 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~--nG~~e~fi-~g~tL~~~~l~~-~~i~~~IA~~la~~H~~~~~-~~~p~lw~~i~kwl~  260 (317)
                      ..++.|++.|++|++++.++  ++++++|| +|+++++.++.+ +.+.+.+|+.||++|...++ ...+.+|..+.+|+.
T Consensus        60 ~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~  139 (301)
T 3dxq_A           60 VAAREAAKAGVSPEVLHVDPATGVMVTRYIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLK  139 (301)
T ss_dssp             HHHHHHHHTTSSCCEEEECTTTCCEEEECCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCceEEEECCCCEEEEeecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHH
Confidence            44678999999999999999  99999999 999999988888 99999999999999998754 345568999999999


Q ss_pred             hcccc
Q psy8745         261 LIPRT  265 (317)
Q Consensus       261 ~~~~~  265 (317)
                      .+...
T Consensus       140 ~~~~~  144 (301)
T 3dxq_A          140 VLSTK  144 (301)
T ss_dssp             HHC--
T ss_pred             HHhhc
Confidence            88765

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.06  E-value=1.3e-05  Score=73.08  Aligned_cols=70  Identities=23%  Similarity=0.272  Sum_probs=49.1

Q ss_pred             HHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHH
Q psy8745          31 QYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWL  110 (317)
Q Consensus        31 ~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi  110 (317)
                      ++|.+.+. ...+.++||+||+++|+++++  +...+|| +-+.++++.+|||..-.  .+   .     +   ....|+
T Consensus       176 ~~L~~~~~-~~~~p~LvHGDlw~gNvl~~~--~g~~~iD-p~~~~g~~e~Dla~~~~--fg---~-----~---~~~~f~  238 (288)
T 3f7w_A          176 DALDHLAG-DPEPPARIHGDLWNGNVLWQD--DGAVVID-PAAHGGHREADLAMLAL--FG---L-----P---YLDRVR  238 (288)
T ss_dssp             HTHHHHTC-SCCCCEEECSCCSGGGEEEET--TEEEECS-CCCEEECHHHHHHHHHH--HC---C-----T---THHHHH
T ss_pred             HHHHHhcc-cCCCCeeeecCCCCCcEEEcC--CCeEEEe-cccccCCHHHHHHHHHh--cC---C-----C---chHHHH
Confidence            44444333 345679999999999999985  4567888 67899999999997422  11   0     1   123688


Q ss_pred             HHHHHHh
Q psy8745         111 RTYLEEY  117 (317)
Q Consensus       111 ~~YL~~y  117 (317)
                      +.|-+.+
T Consensus       239 ~~Y~~~~  245 (288)
T 3f7w_A          239 DAYNEVA  245 (288)
T ss_dssp             HHHHHHS
T ss_pred             HHHHhhC
Confidence            9998875

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.03  E-value=7.4e-06  Score=77.15  Aligned_cols=73  Identities=19%  Similarity=0.201  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHH
Q psy8745          28 SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQL  107 (317)
Q Consensus        28 ~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~  107 (317)
                      +-++++.+.+.....+.++||+|++++|+++++ ++ ..+||| .+.+++|.+|||..  . . +     ..+     ..
T Consensus       191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~-~~-~~~iD~-~~~~g~~~~Dl~~~--~-~-~-----~~~-----~~  253 (312)
T 3jr1_A          191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVD-DK-IFVCNP-ACYWGDRECDIAFS--S-L-F-----EPF-----PT  253 (312)
T ss_dssp             HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEET-TE-EEECSC-CCEEECTHHHHHHH--T-T-S-----SCC-----CH
T ss_pred             HHHHHHHHHhccCCCCceeEeCCCCcCcEeecC-CC-eEEEcC-ccccCChHHHHHHH--H-H-h-----CCc-----cH
Confidence            334566666655556789999999999999986 33 899998 58999999999963  1 1 1     111     14


Q ss_pred             HHHHHHHHHh
Q psy8745         108 SWLRTYLEEY  117 (317)
Q Consensus       108 ~fi~~YL~~y  117 (317)
                      .|++.|-+.+
T Consensus       254 ~~~~~Y~~~~  263 (312)
T 3jr1_A          254 NFYQRYNEIY  263 (312)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHhC
Confidence            6888898874

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=95.59  E-value=0.0082  Score=52.21  Aligned_cols=57  Identities=19%  Similarity=0.226  Sum_probs=44.7

Q ss_pred             chhhhhcCC-CCceEEEecC----ceEEEeecCccCCCCCCCC-cccHHHHHHHHHhhcccCCC
Q psy8745         188 PQILHRAGL-APRLYAEFDN----GLVYQYVRGVTITPDSIRE-PHIHPLVARNMARLHKVHSN  245 (317)
Q Consensus       188 ~~~L~~~~~-gp~l~g~F~n----G~~e~fi~g~tL~~~~l~~-~~i~~~IA~~la~~H~~~~~  245 (317)
                      ++.|+.+|+ .|++++.+.+    .+|.+|++|++|+ -...+ ..+...+|+.|+++|.+..+
T Consensus        67 l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-~~~~~~~~~~~~l~~~l~~lh~~~~~  129 (264)
T 1nd4_A           67 LSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-SSHLAPAEKVSIMADAMRRLHTLDPA  129 (264)
T ss_dssp             HHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-TSCCCHHHHHHHHHHHHHHHTTSCGG
T ss_pred             HHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-cCcCCHhHHHHHHHHHHHHHhCCCCC
Confidence            456667788 8999999987    4899999999996 22222 36889999999999998653

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=95.46  E-value=0.015  Score=55.42  Aligned_cols=41  Identities=22%  Similarity=0.288  Sum_probs=33.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHH
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH   85 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~   85 (317)
                      ..++|+||+|.|||+++ ++.|.|+||-.|..-...-+....
T Consensus       144 ~~IiHRDlKp~NILl~~-~g~vKl~DFGla~~~~~~~~~~~~  184 (350)
T 4b9d_A          144 RKILHRDIKSQNIFLTK-DGTVQLGDFGIARVLNSTVELARA  184 (350)
T ss_dssp             TTCEETTCCGGGEEECT-TCCEEECSTTEESCCCHHHHHHHH
T ss_pred             CCeeeccCCHHHEEECC-CCCEEEcccccceeecCCcccccc
Confidence            35899999999999986 688999999999876655555443

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=95.41  E-value=0.018  Score=51.53  Aligned_cols=29  Identities=41%  Similarity=0.455  Sum_probs=25.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|+|||+++   .++||||..|..
T Consensus       190 ~givHrDlkp~NILl~~---~~~liDFG~a~~  218 (258)
T 1zth_A          190 AELVHADLSEYNIMYID---KVYFIDMGQAVT  218 (258)
T ss_dssp             SCEECSSCSTTSEEESS---SEEECCCTTCEE
T ss_pred             CCEEeCCCCHHHEEEcC---cEEEEECccccc
Confidence            47999999999999974   799999998863

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=95.31  E-value=0.0062  Score=56.05  Aligned_cols=31  Identities=26%  Similarity=0.424  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||+++ ++.+.|+||-.|..
T Consensus       131 ~~IiHRDiKP~NILl~~-~~~vkl~DFGla~~  161 (275)
T 3hyh_A          131 HKIVHRDLKPENLLLDE-HLNVKIADFGLSNI  161 (275)
T ss_dssp             TTCCCCCCCTTTEEECT-TCCEEECCSSCC--
T ss_pred             CCcccccCChHHeEECC-CCCEEEeecCCCee
Confidence            35899999999999986 68899999998864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=95.28  E-value=0.014  Score=58.87  Aligned_cols=31  Identities=23%  Similarity=0.337  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|+|||+++ ++.|+|+||-.|..
T Consensus       358 ~GIIHRDIKPeNILL~~-dg~vKL~DFGlAr~  388 (569)
T 4azs_A          358 QGFWHDDVRPWNVMVDA-RQHARLIDFGSIVT  388 (569)
T ss_dssp             TTCEESCCCGGGEEECT-TSCEEECCCTTEES
T ss_pred             CCceeccCchHhEEECC-CCCEEEeecccCee
Confidence            46899999999999986 68899999988753

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=95.23  E-value=0.0069  Score=57.61  Aligned_cols=31  Identities=23%  Similarity=0.434  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++.+.+.+.|+||-.|.
T Consensus       136 ~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A          136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            4699999999999998755789999999885

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=95.06  E-value=0.0072  Score=56.74  Aligned_cols=31  Identities=29%  Similarity=0.396  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.|.|+||-.|..
T Consensus       151 ~~IiHRDlKPeNILl~~-~g~vKl~DFGla~~  181 (311)
T 4aw0_A          151 KGIIHRDLKPENILLNE-DMHIQITDFGTAKV  181 (311)
T ss_dssp             TTEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCCccCCCCHHHeEEcC-CCCEEEEEcCCcee
Confidence            35899999999999986 68899999998864

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=95.02  E-value=0.029  Score=51.12  Aligned_cols=29  Identities=24%  Similarity=0.316  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.|||++  ++.+.||||..|.
T Consensus       212 ~giiHrDlkp~NILl~--~~~vkl~DFG~a~  240 (282)
T 1zar_A          212 RGIVHGDLSQYNVLVS--EEGIWIIDFPQSV  240 (282)
T ss_dssp             TTEECSCCSTTSEEEE--TTEEEECCCTTCE
T ss_pred             CCCEeCCCCHHHEEEE--CCcEEEEECCCCe
Confidence            3599999999999998  6889999998876

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=95.00  E-value=0.0066  Score=56.25  Aligned_cols=31  Identities=26%  Similarity=0.261  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++.++.+.|+||-.|..
T Consensus       151 ~IiHRDlKp~NILl~~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             CCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             CEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence            4789999999999975467899999998864

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=94.99  E-value=0.024  Score=55.50  Aligned_cols=31  Identities=16%  Similarity=0.376  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.|.|+||-.|..
T Consensus       266 ~~IiHRDiKp~NILl~~-~g~vKl~DFGla~~  296 (423)
T 4fie_A          266 QGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQ  296 (423)
T ss_dssp             TTEECCCCSTTTEEECT-TCCEEECCCTTCEE
T ss_pred             CCeecccCCHHHEEEcC-CCCEEEecCccceE
Confidence            35899999999999986 68899999998864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=94.98  E-value=0.019  Score=54.33  Aligned_cols=32  Identities=16%  Similarity=0.256  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++.+...+.|+||-.|..
T Consensus       169 ~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~  200 (336)
T 4g3f_A          169 RRILHGDVKADNVLLSSDGSRAALCDFGHALC  200 (336)
T ss_dssp             TTEECSCCCGGGEEECTTSCCEEECCCTTCEE
T ss_pred             CCceecccCHHHEEEeCCCCEEEEeeCCCCeE
Confidence            35899999999999986334699999998864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=94.96  E-value=0.019  Score=54.58  Aligned_cols=31  Identities=16%  Similarity=0.376  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.|.|+||-.|..
T Consensus       189 ~~IiHRDlKp~NILl~~-~g~vKl~DFGla~~  219 (346)
T 4fih_A          189 QGVIHRDIKSDSILLTH-DGRVKLSDFGFCAQ  219 (346)
T ss_dssp             TTEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCcccccCCHHHEEECC-CCCEEEecCcCcee
Confidence            35999999999999986 68899999998864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=94.86  E-value=0.025  Score=51.02  Aligned_cols=30  Identities=27%  Similarity=0.424  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       140 ~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~a~~  169 (308)
T 3g33_A          140 CIVHRDLKPENILVTS-GGTVKLADFGLARI  169 (308)
T ss_dssp             TCCCSCCCTTTEEECT-TSCEEECSCSCTTT
T ss_pred             CcccCCCCHHHEEEcC-CCCEEEeeCccccc
Confidence            4899999999999976 67899999998864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=94.81  E-value=0.0085  Score=55.98  Aligned_cols=31  Identities=26%  Similarity=0.377  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.+.|+||-.|..
T Consensus       145 ~~IiHRDlKp~NILl~~-~g~vKl~DFGla~~  175 (304)
T 3ubd_A          145 LGIIYRDLKPENILLDE-EGHIKLTDFGLSKE  175 (304)
T ss_dssp             TTCCCSSCCGGGEEECT-TSCEEEESSEEEEC
T ss_pred             CCCcCCCCCHHHeEEcC-CCCEEeccccccee
Confidence            35899999999999986 68899999998864

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=94.74  E-value=0.029  Score=50.93  Aligned_cols=31  Identities=26%  Similarity=0.411  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||++.+...+.|+||..|..
T Consensus       150 ~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF  180 (330)
T ss_dssp             TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence            5999999999999986445899999998864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=94.73  E-value=0.023  Score=51.23  Aligned_cols=33  Identities=27%  Similarity=0.318  Sum_probs=28.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      .++|+|++|+||+++. ++.+.|+||..+..-..
T Consensus       184 ~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~~~  216 (332)
T 3qd2_B          184 GLMHRDLKPSNIFFTM-DDVVKVGDFGLVTAMDQ  216 (332)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEECSC
T ss_pred             CeeecCCCcccEEEeC-CCCEEEeecCccccccc
Confidence            5899999999999986 67899999998875443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=94.72  E-value=0.0089  Score=55.33  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++. ++.+.|+||-.|..-
T Consensus       138 ~IiHRDlKp~NILl~~-~~~vKl~DFGla~~~  168 (299)
T 4g31_A          138 GLMHRDLKPSNIFFTM-DDVVKVGDFGLVTAM  168 (299)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECCCCCC---
T ss_pred             cCccccCcHHHeEECC-CCcEEEccCccceec
Confidence            5899999999999986 678999999988653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=94.72  E-value=0.014  Score=52.89  Aligned_cols=31  Identities=23%  Similarity=0.259  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ...++|+|++|.||+++. ++.++|+||..|.
T Consensus       160 ~~~ivH~Dikp~Nill~~-~~~~kl~Dfg~a~  190 (337)
T 3mdy_A          160 KPAIAHRDLKSKNILVKK-NGTCCIADLGLAV  190 (337)
T ss_dssp             BCCEECSCCCGGGEEECT-TSCEEECCCTTCE
T ss_pred             CCCEEecccchHHEEECC-CCCEEEEeCCCce
Confidence            348999999999999986 6789999999885

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=94.69  E-value=0.016  Score=51.71  Aligned_cols=32  Identities=22%  Similarity=0.282  Sum_probs=28.0

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++|.|||++. ++.+.|+||..|..
T Consensus       131 ~~~ivH~Dlkp~Nill~~-~~~~kl~Dfg~a~~  162 (301)
T 3q4u_A          131 KPAIAHRDLKSKNILVKK-NGQCCIADLGLAVM  162 (301)
T ss_dssp             BCEEECSCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCCeecCCCChHhEEEcC-CCCEEEeeCCCeee
Confidence            578999999999999986 67899999998753

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=94.67  E-value=0.024  Score=53.15  Aligned_cols=30  Identities=20%  Similarity=0.184  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|+|||++. ++.+.|+||..|..
T Consensus       226 ~ivHrDikp~NIll~~-~~~~kL~DFG~a~~  255 (377)
T 3byv_A          226 GLVHTYLRPVDIVLDQ-RGGVFLTGFEHLVR  255 (377)
T ss_dssp             TEECSCCCGGGEEECT-TCCEEECCGGGCEE
T ss_pred             CeecCCCCHHHEEEcC-CCCEEEEechhhee
Confidence            5899999999999986 68899999998873

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=94.67  E-value=0.032  Score=50.33  Aligned_cols=31  Identities=26%  Similarity=0.311  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+...
T Consensus       128 ~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A          128 NIIHRDLNSHNCLVRE-NKNVVVADFGLARLM  158 (310)
T ss_dssp             TEECSCCSTTSEEECT-TSCEEECCCTTCEEC
T ss_pred             CccCCCCCcCeEEECC-CCCEEEeecccceec
Confidence            4899999999999986 678999999988653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=94.59  E-value=0.027  Score=51.43  Aligned_cols=30  Identities=20%  Similarity=0.381  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||++. ++.+.|+||..|..
T Consensus       135 ~ivH~Dikp~Nil~~~-~~~~kl~Dfg~a~~  164 (325)
T 3kex_A          135 GMVHRNLAARNVLLKS-PSQVQVADFGVADL  164 (325)
T ss_dssp             TCCCSCCSSTTEEESS-SSCEEECSCSGGGG
T ss_pred             CCCCCccchheEEECC-CCeEEECCCCcccc
Confidence            4899999999999976 68899999998864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=94.58  E-value=0.025  Score=52.76  Aligned_cols=30  Identities=10%  Similarity=0.072  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       214 ~ivHrDikp~NIll~~-~~~~kL~DFG~a~~  243 (371)
T 3q60_A          214 GLVHGHFTPDNLFIMP-DGRLMLGDVSALWK  243 (371)
T ss_dssp             TEEETTCSGGGEEECT-TSCEEECCGGGEEE
T ss_pred             CCccCcCCHHHEEECC-CCCEEEEecceeee
Confidence            4899999999999986 67899999998864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=94.50  E-value=0.036  Score=50.91  Aligned_cols=33  Identities=24%  Similarity=0.492  Sum_probs=28.7

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+||+|.|||++..++.+.|+||..+..
T Consensus       149 ~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~  181 (360)
T 3e3p_A          149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKK  181 (360)
T ss_dssp             TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBC
T ss_pred             CCCeecCcCCHHHEEEeCCCCcEEEeeCCCcee
Confidence            567899999999999986568899999998864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=94.47  E-value=0.029  Score=50.29  Aligned_cols=30  Identities=17%  Similarity=0.382  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       157 ~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~~~~  186 (298)
T 2zv2_A          157 KIIHRDIKPSNLLVGE-DGHIKIADFGVSNE  186 (298)
T ss_dssp             TEECCCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeeccCCCHHHEEECC-CCCEEEecCCCccc
Confidence            5899999999999986 67899999998753

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=94.46  E-value=0.032  Score=50.03  Aligned_cols=30  Identities=27%  Similarity=0.378  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       170 ~ivH~dikp~NIli~~-~~~~kl~Dfg~~~~  199 (314)
T 2ivs_A          170 KLVHRDLAARNILVAE-GRKMKISDFGLSRD  199 (314)
T ss_dssp             TEECCCCSGGGEEEET-TTEEEECCCTTCEE
T ss_pred             CCcccccchheEEEcC-CCCEEEcccccccc
Confidence            4899999999999986 67899999998763

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=94.43  E-value=0.033  Score=49.31  Aligned_cols=32  Identities=13%  Similarity=0.268  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.||+++. ++.+.|+||..+...
T Consensus       128 ~~i~H~dlkp~Nili~~-~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A          128 KRVIHRDIKPENLLLGS-AGELKIADFGWSVHA  159 (279)
T ss_dssp             TTCEECCCCGGGEEECT-TSCEEECSCCEESCC
T ss_pred             CCEecccCChHhEEEcC-CCCEEEEeccccccC
Confidence            36899999999999976 688999999987543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=94.42  E-value=0.016  Score=53.43  Aligned_cols=32  Identities=22%  Similarity=0.230  Sum_probs=27.7

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+||+|.|||+++ ++.+.|.||-.|..
T Consensus       126 ~~~IiHRDlKp~NILl~~-~~~~Ki~DFGla~~  157 (303)
T 3hmm_A          126 KPAIAHRDLKSKNILVKK-NGTCCIADLGLAVR  157 (303)
T ss_dssp             BCCEECSCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCCEeeccCCcccEEECC-CCCEEEEeCCCCcc
Confidence            457899999999999986 68899999988754

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=94.40  E-value=0.03  Score=50.06  Aligned_cols=30  Identities=23%  Similarity=0.454  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       146 ~i~H~dikp~Nil~~~-~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          146 QYVHRDLAARNVLVES-EHQVKIGDFGLTKA  175 (302)
T ss_dssp             TEECSCCSGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CcccCCCchheEEEcC-CCCEEECccccccc
Confidence            5899999999999986 68899999998864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=94.35  E-value=0.035  Score=49.59  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       121 ~ivH~dikp~Nil~~~-~~~~kl~Dfg~~~~  150 (292)
T 3o0g_A          121 NVLHRDLKPQNLLINR-NGELKLANFGLARA  150 (292)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeecCCCCHHHEEEcC-CCCEEEeeccccee
Confidence            5899999999999986 67899999998853

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=94.35  E-value=0.15  Score=50.92  Aligned_cols=34  Identities=29%  Similarity=0.467  Sum_probs=28.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhh
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFD   81 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fD   81 (317)
                      .++|+|++|.|||+++   .++|+||..|......-+
T Consensus       451 gIiHrDiKp~NILl~~---~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          451 DVIHNDLTTSNFIFDK---DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             TEECTTCCTTSEEESS---SEEECCCTTCEECCCHHH
T ss_pred             cCccCCCCHHHEEECC---eEEEEECccCEECCCccc
Confidence            4899999999999974   899999999987655433

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=94.34  E-value=0.035  Score=48.73  Aligned_cols=30  Identities=27%  Similarity=0.340  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       124 ~i~H~dikp~Nil~~~-~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A          124 QFIHRDLAARNCLVDR-DLCVKVSDFGMTRY  153 (268)
T ss_dssp             TEEESSCSGGGEEECT-TCCEEECCTTCEEE
T ss_pred             CeecCCcCcceEEECC-CCCEEEccCcccee
Confidence            5899999999999976 67899999998864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=94.30  E-value=0.037  Score=50.03  Aligned_cols=30  Identities=20%  Similarity=0.416  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       136 ~i~H~Dlkp~Nil~~~-~~~~kl~Dfg~~~~  165 (297)
T 3fxz_A          136 QVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ  165 (297)
T ss_dssp             TEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CceeCCCCHHHEEECC-CCCEEEeeCCCcee
Confidence            5899999999999986 67899999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=94.24  E-value=0.036  Score=51.90  Aligned_cols=31  Identities=23%  Similarity=0.402  Sum_probs=27.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|+||++++ ++.+.|+||..++.-
T Consensus       220 gi~H~Dlkp~NIl~~~-~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          220 NIVHRDLKPENILLDD-NMQIRLSDFGFSCHL  250 (365)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             CeecCCCCHHHEEECC-CCCEEEEecCccccc
Confidence            5899999999999986 688999999988753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=94.22  E-value=0.03  Score=50.49  Aligned_cols=30  Identities=23%  Similarity=0.416  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       131 ~i~H~Dlkp~Nil~~~-~~~~kl~Dfg~~~~  160 (294)
T 4eqm_A          131 RIVHRDIKPQNILIDS-NKTLKIFDFGIAKA  160 (294)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECCCSSSTT
T ss_pred             CcccCCCCHHHEEECC-CCCEEEEeCCCccc
Confidence            4899999999999976 67899999998864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=94.22  E-value=0.012  Score=52.26  Aligned_cols=30  Identities=20%  Similarity=0.398  Sum_probs=23.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. .+.+.|+||..+..
T Consensus       130 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~  159 (290)
T 3fme_A          130 SVIHRDVKPSNVLINA-LGQVKMCDFGISGY  159 (290)
T ss_dssp             CCCCCCCSGGGCEECT-TCCEEBCCC-----
T ss_pred             CeecCCCCHHHEEECC-CCCEEEeecCCccc
Confidence            6899999999999986 67899999988764

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=94.22  E-value=0.033  Score=52.11  Aligned_cols=30  Identities=20%  Similarity=0.339  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       161 ~ivHrDlkp~NIll~~-~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          161 DLIYRDLKPENLLIDQ-QGYIQVTDFGFAKR  190 (350)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CcccccCccceEEECC-CCCEEEccccccee
Confidence            5899999999999976 68899999998864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=94.22  E-value=0.035  Score=50.97  Aligned_cols=30  Identities=23%  Similarity=0.368  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       171 ~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          171 GYVHRDLAARNVLVDS-NLVCKVSDFGLSRV  200 (325)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCSSCEE
T ss_pred             CeeCCCCCcceEEECC-CCCEEECCCCcccc
Confidence            4899999999999976 67899999998864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=94.21  E-value=0.03  Score=50.93  Aligned_cols=30  Identities=17%  Similarity=0.299  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||+++ ++.++|+||..|..
T Consensus       140 ~ivH~Dikp~Nill~~-~~~~kL~DFG~a~~  169 (336)
T 3g2f_A          140 AISHRDLNSRNVLVKN-DGTCVISDFGLSMR  169 (336)
T ss_dssp             CEECSSCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             ceeecccccceEEEcC-CCcEEEeeccceee
Confidence            7899999999999986 67899999998853

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=94.20  E-value=0.042  Score=50.17  Aligned_cols=29  Identities=17%  Similarity=0.284  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||++++ ++.++|+||..|.
T Consensus       151 ~ivH~Dlkp~Nill~~-~~~~kL~DFg~a~  179 (322)
T 3soc_A          151 AISHRDIKSKNVLLKN-NLTACIADFGLAL  179 (322)
T ss_dssp             EEECSCCSGGGEEECT-TCCEEECCCTTCE
T ss_pred             CEEeCCCChHhEEECC-CCeEEEccCCccc
Confidence            8999999999999986 6789999998885

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=94.19  E-value=0.063  Score=49.84  Aligned_cols=76  Identities=16%  Similarity=0.232  Sum_probs=52.6

Q ss_pred             chhhhhcCC-CCceEEEecCc-------eEEEeecCccCCCCCCCC------cccHHHHHHHHHhhcccCCCC------C
Q psy8745         188 PQILHRAGL-APRLYAEFDNG-------LVYQYVRGVTITPDSIRE------PHIHPLVARNMARLHKVHSNM------K  247 (317)
Q Consensus       188 ~~~L~~~~~-gp~l~g~F~nG-------~~e~fi~g~tL~~~~l~~------~~i~~~IA~~la~~H~~~~~~------~  247 (317)
                      ++.|++.|+ .|++|+.+.++       .|.+|++|+++....+.+      ..+...+++.|+++|.+..+.      .
T Consensus        90 l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~  169 (359)
T 3dxp_A           90 MDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYG  169 (359)
T ss_dssp             HHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSS
T ss_pred             HHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccC
Confidence            345666667 89999999877       799999999996543332      245788999999999986531      1


Q ss_pred             CCc--chHHHHHHHhhcc
Q psy8745         248 TPK--LWSTGKHMLSLIP  263 (317)
Q Consensus       248 ~p~--lw~~i~kwl~~~~  263 (317)
                      .|.  +-..+..|.....
T Consensus       170 ~~~~~~~~~~~~~~~~~~  187 (359)
T 3dxp_A          170 KPGNYFQRQIERWTKQYK  187 (359)
T ss_dssp             CCSCHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHH
Confidence            222  3455666665443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=94.19  E-value=0.04  Score=52.72  Aligned_cols=32  Identities=22%  Similarity=0.406  Sum_probs=27.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||++.|||++.+.+.+.|+||..|..
T Consensus       175 ~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~  206 (420)
T 1j1b_A          175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  206 (420)
T ss_dssp             TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence            45899999999999986456789999998863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=94.18  E-value=0.029  Score=51.06  Aligned_cols=32  Identities=22%  Similarity=0.230  Sum_probs=28.0

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++|.||+++. ++.+.|+||..+..
T Consensus       165 ~~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~  196 (342)
T 1b6c_B          165 KPAIAHRDLKSKNILVKK-NGTCCIADLGLAVR  196 (342)
T ss_dssp             BCEEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             cCCeeeCCCCHHHEEECC-CCCEEEEECCCcee
Confidence            568999999999999976 67899999998854

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=94.16  E-value=0.03  Score=49.85  Aligned_cols=30  Identities=33%  Similarity=0.407  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       144 ~i~H~dikp~Nili~~-~~~~kl~Dfg~~~~  173 (298)
T 3pls_A          144 KFVHRDLAARNCMLDE-SFTVKVADFGLARD  173 (298)
T ss_dssp             TCCCSCCSGGGEEECT-TCCEEECCTTSSCT
T ss_pred             CcccCCCCcceEEEcC-CCcEEeCcCCCccc
Confidence            4899999999999976 67899999998863

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=94.13  E-value=0.038  Score=48.83  Aligned_cols=30  Identities=23%  Similarity=0.391  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       129 ~i~H~dikp~Nil~~~-~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A          129 NYIHRDLRAANILVSD-TLSCKIADFGLARL  158 (279)
T ss_dssp             TEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeeccCCCHhhEEEcC-CCCEEECCCccccc
Confidence            5899999999999986 67899999998864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=94.13  E-value=0.049  Score=51.08  Aligned_cols=32  Identities=19%  Similarity=0.467  Sum_probs=27.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+||+|++|.||+++..++.+.|+||..|..
T Consensus       160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~  191 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKK  191 (383)
T ss_dssp             TTEECSCCCGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CcCccCccCHHHEEEcCCCCcEEEEECCCCcc
Confidence            46999999999999985568899999998864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=94.11  E-value=0.041  Score=50.62  Aligned_cols=30  Identities=17%  Similarity=0.367  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       144 ~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A          144 KILHRDMKAANVLITR-DGVLKLADFGLARA  173 (351)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeeCCCCCHHHEEEcC-CCCEEEccchhccc
Confidence            5899999999999986 67899999998753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=94.10  E-value=0.041  Score=50.28  Aligned_cols=30  Identities=23%  Similarity=0.404  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       120 ~ivH~Dikp~NIl~~~-~~~~kl~Dfg~a~~  149 (324)
T 3mtl_A          120 KVLHRDLKPQNLLINE-RGELKLADFGLARA  149 (324)
T ss_dssp             TEEESSCCGGGEEECT-TCCEEECSSSEEEC
T ss_pred             CccCCCcCHHHEEECC-CCCEEEccCccccc
Confidence            5899999999999986 67899999998864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=94.10  E-value=0.04  Score=50.75  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=27.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.|+||..|..
T Consensus       125 ~~ivHrDlkp~NIll~~-~g~~kL~Dfg~a~~  155 (318)
T 1fot_A          125 KDIIYRDLKPENILLDK-NGHIKITDFGFAKY  155 (318)
T ss_dssp             TTEECCCCCGGGEEECT-TSCEEECCCSSCEE
T ss_pred             CCccccCCChheEEEcC-CCCEEEeecCccee
Confidence            35899999999999976 68899999998864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=94.08  E-value=0.042  Score=51.54  Aligned_cols=30  Identities=23%  Similarity=0.354  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       129 ~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~  158 (388)
T 3oz6_A          129 GLLHRDMKPSNILLNA-ECHVKVADFGLSRS  158 (388)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CEEeCCCCHHHeEEcC-CCCEEecCCccccc
Confidence            5899999999999986 68899999998853

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=94.08  E-value=0.033  Score=52.29  Aligned_cols=31  Identities=23%  Similarity=0.351  Sum_probs=27.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++. ++.+.|+||..|...
T Consensus       144 givHrDlkp~NILl~~-~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          144 GIIYRDLKLDNVLLDH-EGHCKLADFGMCKEG  174 (353)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCCTTCBCS
T ss_pred             CCcccCCCHHHEEECC-CCCEEEccccceeec
Confidence            5899999999999986 688999999988753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=94.07  E-value=0.032  Score=49.44  Aligned_cols=31  Identities=23%  Similarity=0.352  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+...
T Consensus       140 ~i~H~dikp~Nili~~-~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A          140 QFLHRDLAARNCLVND-QGVVKVSDFGLSRYV  170 (283)
T ss_dssp             TCCCSSCSGGGEEECT-TSCEEECSTTGGGGB
T ss_pred             CccCCCCccceEEEcC-CCCEEEccccccccc
Confidence            5899999999999986 678999999988643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=94.06  E-value=0.044  Score=49.98  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||+++.+.+.+.|+||..+..
T Consensus       169 ~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~  199 (320)
T 3a99_A          169 GVLHRDIKDENILIDLNRGELKLIDFGSGAL  199 (320)
T ss_dssp             TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence            5899999999999985468999999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=94.06  E-value=0.032  Score=50.51  Aligned_cols=30  Identities=27%  Similarity=0.370  Sum_probs=24.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..|..
T Consensus       157 ~ivH~Dikp~NIli~~-~~~~kl~Dfg~a~~  186 (323)
T 3qup_A          157 NFIHRDLAARNCMLAE-DMTVCVADFGLSRK  186 (323)
T ss_dssp             TCCCSCCSGGGEEECT-TSCEEECCCCC---
T ss_pred             CcccCCCCcceEEEcC-CCCEEEeecccccc
Confidence            4899999999999986 67899999988764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=94.05  E-value=0.036  Score=49.52  Aligned_cols=30  Identities=30%  Similarity=0.405  Sum_probs=23.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       140 ~i~H~Dlkp~Nil~~~-~~~~kl~Dfg~~~~  169 (289)
T 3og7_A          140 SIIHRDLKSNNIFLHE-DNTVKIGDFGLATE  169 (289)
T ss_dssp             TCCCSCCCGGGEEEET-TTEEEECCCC----
T ss_pred             CcccccCccceEEECC-CCCEEEccceeccc
Confidence            5899999999999987 68899999988753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=94.04  E-value=0.016  Score=53.12  Aligned_cols=33  Identities=30%  Similarity=0.600  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCC--------------------eEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETED--------------------KVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~--------------------~l~lIDfEya~~n~   77 (317)
                      ..++|+||+|.|||++. .+                    .+.|+||..|....
T Consensus       181 ~~ivHrDlKp~NILl~~-~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~  233 (336)
T 2vuw_A          181 LRFEHRDLHWGNVLLKK-TSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER  233 (336)
T ss_dssp             HCCBCSCCCGGGEEEEE-CSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE
T ss_pred             CCEeECCCCHHHEEEec-cCCcceeeeccCccccccCCCceEEEeeccccEecC
Confidence            46999999999999986 33                    79999999887543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=94.03  E-value=0.044  Score=50.29  Aligned_cols=30  Identities=20%  Similarity=0.278  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..+..
T Consensus       141 ~ivH~Dlkp~Nill~~-~~~~kl~Dfg~~~~  170 (327)
T 3a62_A          141 GIIYRDLKPENIMLNH-QGHVKLTDFGLCKE  170 (327)
T ss_dssp             TCCCCCCCTTTEEECT-TSCEEECCCSCC--
T ss_pred             CEEcccCCHHHeEECC-CCcEEEEeCCcccc
Confidence            5899999999999986 68899999998763

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=94.02  E-value=0.04  Score=48.51  Aligned_cols=30  Identities=20%  Similarity=0.256  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       142 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~  171 (284)
T 2a19_B          142 KLINRDLKPSNIFLVD-TKQVKIGDFGLVTS  171 (284)
T ss_dssp             TEECSCCSGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CeeeccCCHHHEEEcC-CCCEEECcchhhee
Confidence            5899999999999986 68899999998764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=93.99  E-value=0.043  Score=49.09  Aligned_cols=34  Identities=18%  Similarity=0.199  Sum_probs=27.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      .++|+|++|.||+++..++.+.|+||..+.....
T Consensus       140 ~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~  173 (320)
T 2i6l_A          140 NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP  173 (320)
T ss_dssp             TCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--
T ss_pred             CEecCCCCHHHEEEcCCCCeEEEccCccccccCC
Confidence            5899999999999985467899999999876543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=93.98  E-value=0.037  Score=50.07  Aligned_cols=30  Identities=23%  Similarity=0.370  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||+++. ++.+.|+||..+..
T Consensus       136 ~ivH~dlkp~Nil~~~-~~~~kl~Dfg~a~~  165 (311)
T 3ork_A          136 GIIHRDVKPANIMISA-TNAVKVMDFGIARA  165 (311)
T ss_dssp             TCCCCCCCGGGEEEET-TSCEEECCCSCC--
T ss_pred             CCCcCCCCHHHEEEcC-CCCEEEeeccCccc
Confidence            5899999999999986 67899999998864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=93.97  E-value=0.041  Score=50.48  Aligned_cols=31  Identities=29%  Similarity=0.509  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.|+||..+..
T Consensus       124 ~givH~Dlkp~NIll~~-~~~~kl~Dfg~a~~  154 (323)
T 3tki_A          124 IGITHRDIKPENLLLDE-RDNLKISDFGLATV  154 (323)
T ss_dssp             TTEECSCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCccccccchHHEEEeC-CCCEEEEEeeccce
Confidence            35999999999999986 68899999998863

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=93.96  E-value=0.034  Score=49.08  Aligned_cols=32  Identities=25%  Similarity=0.354  Sum_probs=25.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||++++ ++.+.|+||..+...
T Consensus       135 ~~ivH~dl~p~NIl~~~-~~~~kl~dfg~~~~~  166 (279)
T 2w5a_A          135 HTVLHRDLKPANVFLDG-KQNVKLGDFGLARIL  166 (279)
T ss_dssp             ---CCCCCSGGGEEECS-SSCEEECCCCHHHHC
T ss_pred             CeeEEeccchhhEEEcC-CCCEEEecCchheee
Confidence            45999999999999986 678999999887643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=93.94  E-value=0.05  Score=49.70  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       192 ~ivH~Dikp~NIll~~-~~~~kL~Dfg~~~~  221 (344)
T 1rjb_A          192 SCVHRDLAARNVLVTH-GKVVKICDFGLARD  221 (344)
T ss_dssp             TEEETTCSGGGEEEET-TTEEEECCCGGGSC
T ss_pred             CcccCCCChhhEEEcC-CCcEEeCCCccCcc
Confidence            5899999999999986 68899999998864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=93.92  E-value=0.037  Score=49.44  Aligned_cols=31  Identities=29%  Similarity=0.474  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.+.|+||..+...
T Consensus       134 ~ivH~Dikp~Nil~~~-~~~~kl~Dfg~~~~~  164 (295)
T 3ugc_A          134 RYIHRDLATRNILVEN-ENRVKIGDFGLTKVL  164 (295)
T ss_dssp             TCCCSCCSGGGEEEEE-TTEEEECCCCSCC--
T ss_pred             CcccCCCCHhhEEEcC-CCeEEEccCcccccc
Confidence            5899999999999986 688999999988753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=93.92  E-value=0.034  Score=49.38  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=22.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       136 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A          136 RFVHRDIAARNVLVSS-NDCVKLGDFGLSRY  165 (281)
T ss_dssp             TCCCSCCSGGGEEEEE-TTEEEECC------
T ss_pred             CeecccccHHHEEECC-CCCEEECccccccc
Confidence            5899999999999986 68899999988764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=93.91  E-value=0.02  Score=52.15  Aligned_cols=30  Identities=20%  Similarity=0.381  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       139 ~ivH~Dikp~NIl~~~-~~~~kl~Dfg~a~~  168 (311)
T 3niz_A          139 RILHRDLKPQNLLINS-DGALKLADFGLARA  168 (311)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CcccCCCchHhEEECC-CCCEEEccCcCcee
Confidence            5899999999999986 67899999998864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=93.89  E-value=0.052  Score=51.38  Aligned_cols=31  Identities=26%  Similarity=0.531  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++...+.+.|+||..|..
T Consensus       161 ~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            5899999999999984478899999998864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=93.87  E-value=0.046  Score=48.97  Aligned_cols=30  Identities=27%  Similarity=0.349  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       153 ~i~H~dlkp~Nili~~-~~~~kl~Dfg~~~~  182 (307)
T 2nru_A          153 HHIHRDIKSANILLDE-AFTAKISDFGLARA  182 (307)
T ss_dssp             TEECSCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CeecCCCCHHHEEEcC-CCcEEEeecccccc
Confidence            5899999999999976 67899999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=93.87  E-value=0.042  Score=52.87  Aligned_cols=31  Identities=23%  Similarity=0.280  Sum_probs=27.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++. ++.+.|+||..|...
T Consensus       176 ~iiHrDlKp~NILl~~-~~~~kl~DFGla~~~  206 (458)
T 3rp9_A          176 GILHRDLKPANCLVNQ-DCSVKVCDFGLARTV  206 (458)
T ss_dssp             TCBCCCCCGGGEEECT-TCCEEECCCTTCBCT
T ss_pred             CcCCCCCChhhEEECC-CCCEeecccccchhc
Confidence            5899999999999986 678999999988653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=93.86  E-value=0.046  Score=50.44  Aligned_cols=30  Identities=27%  Similarity=0.416  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..|..
T Consensus       132 ~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A          132 WILHRDLKPNNLLLDE-NGVLKLADFGLAKS  161 (346)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECCCGGGST
T ss_pred             CEECCCCCHHHEEEcC-CCCEEEEeccccee
Confidence            4899999999999986 67899999998864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=93.85  E-value=0.042  Score=48.58  Aligned_cols=30  Identities=23%  Similarity=0.417  Sum_probs=24.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       137 ~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~~  166 (278)
T 1byg_A          137 NFVHRDLAARNVLVSE-DNVAKVSDFGLTKE  166 (278)
T ss_dssp             TCCCSCCSGGGEEECT-TSCEEECCCCC---
T ss_pred             CccccCCCcceEEEeC-CCcEEEeecccccc
Confidence            5899999999999986 67899999998764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=93.82  E-value=0.049  Score=48.06  Aligned_cols=31  Identities=23%  Similarity=0.345  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.+.|+||..+...
T Consensus       132 ~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~  162 (278)
T 3cok_A          132 GILHRDLTLSNLLLTR-NMNIKIADFGLATQL  162 (278)
T ss_dssp             TEECSSCCGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             CeecCCCCHHHEEEcC-CCCEEEEeecceeec
Confidence            5899999999999976 678999999988653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=93.82  E-value=0.019  Score=53.04  Aligned_cols=29  Identities=21%  Similarity=0.466  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++. ++.+.|+||..+.
T Consensus       152 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~  180 (360)
T 3eqc_A          152 KIMHRDVKPSNILVNS-RGEIKLCDFGVSG  180 (360)
T ss_dssp             CCCCSCCSGGGEEECT-TCCEEECCCCCCH
T ss_pred             CEEcCCccHHHEEECC-CCCEEEEECCCCc
Confidence            5899999999999986 6789999998874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=93.82  E-value=0.046  Score=50.80  Aligned_cols=33  Identities=21%  Similarity=0.288  Sum_probs=28.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      .++|+|++|.||+++. ++.+.|+||..+.....
T Consensus       148 ~ivH~Dikp~NIl~~~-~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          148 NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADP  180 (364)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEECCG
T ss_pred             CeecCCCChHhEEECC-CCCEEEEeCcceEecCC
Confidence            5899999999999986 67899999999875443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=93.82  E-value=0.052  Score=49.67  Aligned_cols=32  Identities=19%  Similarity=0.271  Sum_probs=27.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      .++|+|++|.||+++. ++.+.|+||..+....
T Consensus       132 ~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A          132 NVIHRDLKPSNLLINS-NCDLKVCDFGLARIID  163 (353)
T ss_dssp             TEECSCCCGGGEEECT-TCCEEECCCTTCEECC
T ss_pred             CeecCCCCHHHeEEcC-CCcEEEEecccccccc
Confidence            5899999999999976 6789999999887543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=93.81  E-value=0.032  Score=49.73  Aligned_cols=31  Identities=26%  Similarity=0.261  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++...+.+.|+||..+..
T Consensus       151 ~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             CCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             CEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            4899999999999974468899999998853

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=93.81  E-value=0.047  Score=49.67  Aligned_cols=31  Identities=26%  Similarity=0.403  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|+++.||+++. ++.+.|+||..+...
T Consensus       154 ~ivH~Dikp~Nil~~~-~~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          154 HYIHRDLAARNVLLDN-DRLVKIGDFGLAKAV  184 (318)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCGGGCEEC
T ss_pred             CccCCCCchheEEEcC-CCCEEECCccccccc
Confidence            4899999999999986 678999999988653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=93.80  E-value=0.035  Score=50.99  Aligned_cols=30  Identities=23%  Similarity=0.419  Sum_probs=24.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       137 ~ivH~Dikp~NIl~~~-~~~~kL~DfG~a~~  166 (327)
T 3lzb_A          137 RLVHRDLAARNVLVKT-PQHVKITDFGLAKL  166 (327)
T ss_dssp             TCCCSCCCGGGEEEEE-TTEEEECCTTC---
T ss_pred             CCcCCCCCHHHEEEcC-CCCEEEccCcceeE
Confidence            5899999999999986 68899999988864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=93.79  E-value=0.042  Score=49.06  Aligned_cols=30  Identities=33%  Similarity=0.418  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       148 ~i~H~dikp~Nil~~~-~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          148 KFVHRDLAARNCMLDE-KFTVKVADFGLARD  177 (298)
T ss_dssp             TCCCSCCSGGGEEECT-TCCEEECSCGGGCC
T ss_pred             CccCCCCchheEEECC-CCCEEECccccccc
Confidence            5899999999999976 67899999998864

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=93.77  E-value=0.05  Score=47.77  Aligned_cols=30  Identities=30%  Similarity=0.492  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||++++ ++.+.|+||..+..
T Consensus       125 ~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~  154 (276)
T 2yex_A          125 GITHRDIKPENLLLDE-RDNLKISDFGLATV  154 (276)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CeeccCCChHHEEEcc-CCCEEEeeCCCccc
Confidence            5899999999999986 67899999998864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=93.77  E-value=0.059  Score=47.80  Aligned_cols=31  Identities=13%  Similarity=0.260  Sum_probs=26.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|+++.||+++. ++.+.|+||..+..
T Consensus       133 ~~i~H~dl~p~Nil~~~-~~~~kl~Dfg~~~~  163 (284)
T 2vgo_A          133 RKVIHRDIKPENLLMGY-KGELKIADFGWSVH  163 (284)
T ss_dssp             TTEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCceecCCCHHHEEEcC-CCCEEEeccccccc
Confidence            35899999999999976 67899999998753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=93.76  E-value=0.055  Score=49.28  Aligned_cols=30  Identities=20%  Similarity=0.350  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       128 ~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A          128 KILHRDLKPQNLLINK-RGQLKLGDFGLARA  157 (317)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCSSCEE
T ss_pred             CeeeCCCChHHeEEcC-CCCEEECcCcccee
Confidence            5899999999999986 67899999998864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=93.75  E-value=0.043  Score=50.96  Aligned_cols=30  Identities=20%  Similarity=0.249  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCC----------CCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDET----------EDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~----------~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++..          .+.+.|+||..|.
T Consensus       192 ~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~  231 (365)
T 3e7e_A          192 EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSI  231 (365)
T ss_dssp             TEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCE
T ss_pred             CeecCCCCHHHEEecccccCccccccccCCEEEeeCchhh
Confidence            59999999999999641          4789999999884

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=93.75  E-value=0.052  Score=50.15  Aligned_cols=30  Identities=27%  Similarity=0.377  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       150 ~ivH~Dlkp~NIll~~-~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          150 DIIHRDIKDENIVIAE-DFTIKLIDFGSAAY  179 (335)
T ss_dssp             TEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeEEeccCHHHEEEcC-CCcEEEeecccceE
Confidence            5899999999999986 67899999998864

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=93.74  E-value=0.042  Score=51.25  Aligned_cols=30  Identities=27%  Similarity=0.422  Sum_probs=26.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       130 ~ivHrDlkp~NIll~~-~g~~kL~DFG~a~~  159 (345)
T 3a8x_A          130 GIIYRDLKLDNVLLDS-EGHIKLTDYGMCKE  159 (345)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCGGGCBC
T ss_pred             CceecCCCHHHEEECC-CCCEEEEecccccc
Confidence            5899999999999986 68899999998874

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=93.72  E-value=0.053  Score=49.62  Aligned_cols=30  Identities=17%  Similarity=0.369  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|+||+++. ++.+.|+||..+..
T Consensus       161 ~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~  190 (321)
T 2c30_A          161 GVIHRDIKSDSILLTL-DGRVKLSDFGFCAQ  190 (321)
T ss_dssp             TEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CeecCCCCHHHEEECC-CCcEEEeeeeeeee
Confidence            5899999999999986 67899999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=93.71  E-value=0.056  Score=50.40  Aligned_cols=31  Identities=29%  Similarity=0.327  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|...
T Consensus       152 ~IiHRDlKp~NILl~~-~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          152 NIIHRDMKSNNIFLHE-GLTVKIGDFGLATVK  182 (307)
T ss_dssp             TCBCSCCCSSSEEEET-TEEEEECCCSSCBC-
T ss_pred             CccCCccCHHHEEECC-CCcEEEeeccCceec
Confidence            4789999999999986 678999999988653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=93.71  E-value=0.047  Score=49.16  Aligned_cols=31  Identities=23%  Similarity=0.314  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||+++..++.+.|+||..+..
T Consensus       159 ~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~  189 (312)
T 2iwi_A          159 GVVHRDIKDENILIDLRRGCAKLIDFGSGAL  189 (312)
T ss_dssp             TEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred             CeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence            5899999999999984468899999998764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=93.69  E-value=0.048  Score=52.03  Aligned_cols=31  Identities=19%  Similarity=0.166  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.++|+||..|..
T Consensus       230 ~~iiHrDiKp~NILl~~-~~~~kL~DFG~a~~  260 (413)
T 3dzo_A          230 YGLVHTYLRPVDIVLDQ-RGGVFLTGFEHLVR  260 (413)
T ss_dssp             TTEECSCCCGGGEEECT-TCCEEECCGGGCEE
T ss_pred             CCcccCCcccceEEEec-CCeEEEEeccceee
Confidence            35899999999999986 57799999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=93.69  E-value=0.05  Score=51.09  Aligned_cols=29  Identities=24%  Similarity=0.391  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++. ++.+.|+||..|.
T Consensus       223 ~ivHrDlkp~NIll~~-~~~~kl~DFG~a~  251 (370)
T 2psq_A          223 KCIHRDLAARNVLVTE-NNVMKIADFGLAR  251 (370)
T ss_dssp             TEECSCCCGGGEEECT-TCCEEECCCSSCE
T ss_pred             CeeccccchhhEEECC-CCCEEEccccCCc
Confidence            5899999999999986 6889999999886

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.68  E-value=0.057  Score=49.92  Aligned_cols=56  Identities=18%  Similarity=0.320  Sum_probs=42.3

Q ss_pred             hhhhhc-CC-CCceEEEecCc-------eEEEeecCccCCCC-----------CCCC---cccHHHHHHHHHhhcccCC
Q psy8745         189 QILHRA-GL-APRLYAEFDNG-------LVYQYVRGVTITPD-----------SIRE---PHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       189 ~~L~~~-~~-gp~l~g~F~nG-------~~e~fi~g~tL~~~-----------~l~~---~~i~~~IA~~la~~H~~~~  244 (317)
                      +.|+++ |+ .|++|+...++       .|.+||+|+++...           ++..   ..+...+|+.|+++|.+..
T Consensus        82 ~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~  160 (357)
T 3ats_A           82 RLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPN  160 (357)
T ss_dssp             HHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             HHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence            456665 65 89999988776       79999999998752           2221   2567889999999999865

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=93.67  E-value=0.051  Score=49.86  Aligned_cols=30  Identities=33%  Similarity=0.472  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||+++. ++.+.|+||..+..
T Consensus       161 ~ivH~dlkp~NIl~~~-~~~~kl~Dfg~~~~  190 (335)
T 2owb_A          161 RVIHRDLKLGNLFLNE-DLEVKIGDFGLATK  190 (335)
T ss_dssp             TEECSCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCEecCCCchhEEEcC-CCCEEEeeccCcee
Confidence            5899999999999986 67899999998864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=93.66  E-value=0.044  Score=51.08  Aligned_cols=30  Identities=17%  Similarity=0.361  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       125 ~ivHrDlkp~NIll~~-~g~vkL~DFG~a~~  154 (337)
T 1o6l_A          125 DVVYRDIKLENLMLDK-DGHIKITDFGLCKE  154 (337)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CeecCcCCHHHEEECC-CCCEEEeeccchhh
Confidence            5899999999999986 68899999998864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=93.65  E-value=0.054  Score=48.30  Aligned_cols=30  Identities=33%  Similarity=0.472  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||++++ ++.+.|+||..+..
T Consensus       135 ~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~  164 (294)
T 2rku_A          135 RVIHRDLKLGNLFLNE-DLEVKIGDFGLATK  164 (294)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CccccCCChHhEEEcC-CCCEEEEeccCcee
Confidence            5899999999999986 67899999998864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=93.64  E-value=0.039  Score=50.09  Aligned_cols=30  Identities=17%  Similarity=0.181  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||++. ++.+.|+||..+..
T Consensus       177 ~ivH~Dikp~NIll~~-~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          177 GLVHLDVKPANIFLGP-RGRCKLGDFGLLVE  206 (311)
T ss_dssp             TEECCCCSGGGEEECG-GGCEEECCCTTCEE
T ss_pred             CEecCCCCHHHEEECC-CCCEEEccceeeee
Confidence            4899999999999976 67899999988653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=93.63  E-value=0.044  Score=51.95  Aligned_cols=30  Identities=20%  Similarity=0.327  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       159 givHrDlkp~NIll~~-~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          159 NIVYRDLKPENILLDS-QGHIVLTDFGLCKE  188 (373)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECCCCBCGG
T ss_pred             CceecCCCHHHEEECC-CCCEEEeeCccccc
Confidence            5899999999999986 68899999998864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=93.62  E-value=0.037  Score=50.15  Aligned_cols=31  Identities=29%  Similarity=0.360  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.|+||..+..
T Consensus       153 ~~ivH~Dlkp~Nil~~~-~~~~kl~Dfg~~~~  183 (326)
T 3uim_A          153 PKIIHRDVKAANILLDE-EFEAVVGDFGLAKL  183 (326)
T ss_dssp             SCEECCCCSGGGEEECT-TCCEEECCCSSCEE
T ss_pred             CCeEeCCCchhhEEECC-CCCEEeccCccccc
Confidence            37899999999999986 67899999998863

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=93.61  E-value=0.034  Score=49.00  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+...
T Consensus       126 ~i~H~dikp~Nil~~~-~~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A          126 CVIHRDLAARNCLVGE-NQVIKVSDFGMTRFV  156 (269)
T ss_dssp             TCCCSCCCGGGEEECG-GGCEEECCTTGGGGB
T ss_pred             CeecCCcchheEEEcC-CCCEEeccccccccc
Confidence            4899999999999976 578999999988643

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=93.61  E-value=0.056  Score=51.83  Aligned_cols=33  Identities=21%  Similarity=0.260  Sum_probs=27.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      .++|+||+|+|||++. ++.+.|+||..|.....
T Consensus       149 givHrDlkp~NILl~~-~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          149 GIIHRDLKPANCLLNQ-DCSVKVCDFGLARTINS  181 (432)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEEC--
T ss_pred             CCCCCCCCHHHeEECC-CCCEEEccCCCcccccc
Confidence            4899999999999986 67899999999875443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=93.60  E-value=0.045  Score=51.39  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       141 givHrDlkp~NIll~~-~g~vkL~DFG~a~~  170 (353)
T 2i0e_A          141 GIIYRDLKLDNVMLDS-EGHIKIADFGMCKE  170 (353)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CEEeccCCHHHEEEcC-CCcEEEEeCCcccc
Confidence            5899999999999986 68899999998864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=93.60  E-value=0.023  Score=54.61  Aligned_cols=31  Identities=19%  Similarity=0.352  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.|+||..|..
T Consensus       268 ~giiHrDlkp~NIll~~-~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          268 KNVVYRDLKLENLMLDK-DGHIKITDFGLCKE  298 (446)
T ss_dssp             TCCCCCCCCGGGEEECS-SSCEEECCCCCCCT
T ss_pred             CCEEECCCCHHHEEECC-CCCEEEccCCCcee
Confidence            35899999999999986 67899999998864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=93.58  E-value=0.06  Score=48.31  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=27.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+...
T Consensus       122 ~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~~  152 (311)
T 4agu_A          122 NCIHRDVKPENILITK-HSVIKLCDFGFARLL  152 (311)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEEC
T ss_pred             CCcCCCCChhhEEEcC-CCCEEEeeCCCchhc
Confidence            5899999999999976 688999999988653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=93.58  E-value=0.033  Score=50.62  Aligned_cols=31  Identities=23%  Similarity=0.228  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.|+||..+..
T Consensus       158 ~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          158 RAIIHRDVKSINILLDE-NFVPKITDFGISKK  188 (321)
T ss_dssp             TTEECSCCCSTTEEECT-TCCEEECCCTTCEE
T ss_pred             CCeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence            36899999999999976 67899999998764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=93.57  E-value=0.059  Score=48.06  Aligned_cols=30  Identities=20%  Similarity=0.352  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       137 ~i~H~dikp~Nil~~~-~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A          137 NFVHRDLAARNVLLVT-QHYAKISDFGLSKA  166 (291)
T ss_dssp             TEECSCCSGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CeEcCCCCcceEEEeC-CCcEEEccCCccee
Confidence            5899999999999986 67899999998764

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=93.55  E-value=0.055  Score=47.91  Aligned_cols=31  Identities=19%  Similarity=0.275  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..-
T Consensus       133 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A          133 NCVHRDIAVRNILVAS-PECVKLGDFGLSRYI  163 (281)
T ss_dssp             TCCCCCCSGGGEEEEE-TTEEEECCCCGGGCC
T ss_pred             CcccCCCccceEEECC-CCcEEeCccCCCccc
Confidence            5899999999999986 688999999988653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=93.54  E-value=0.024  Score=51.52  Aligned_cols=31  Identities=23%  Similarity=0.436  Sum_probs=26.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|+++.||+++. ++.+.|+||..+...
T Consensus       146 ~ivH~dlkp~NIll~~-~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          146 KIIHRDIKPSNILLDR-SGNIKLCDFGISGQL  176 (327)
T ss_dssp             SCCCSCCCGGGEEEET-TTEEEECCCSSSCC-
T ss_pred             CEeECCCCHHHEEEcC-CCCEEEccCCCceec
Confidence            6899999999999986 688999999988643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=93.52  E-value=0.055  Score=48.94  Aligned_cols=31  Identities=19%  Similarity=0.349  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.||+++. ++.+.|+||..+...
T Consensus       149 ~ivH~dlkp~NIl~~~-~~~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          149 KVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQL  179 (326)
T ss_dssp             TCCCCCCSGGGEEECT-TCCEEECCCTTTC--
T ss_pred             CccccCCcHHHEEEcC-CCCEEEeeCcCceec
Confidence            4899999999999976 678999999987653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=93.52  E-value=0.055  Score=52.57  Aligned_cols=27  Identities=26%  Similarity=0.329  Sum_probs=22.0

Q ss_pred             eeeecCCCCCCeeeeCCCC---------eEEEEeec
Q psy8745          45 VFCHNDLLLGNIIYDETED---------KVTFIDYE   71 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~---------~l~lIDfE   71 (317)
                      .++|+||+|.|||++++++         .+++|||-
T Consensus       225 gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~  260 (397)
T 4gyi_A          225 GLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFP  260 (397)
T ss_dssp             TEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred             CCcCCCCCHHHEEEeCCCCcccccccccceEEEEeC
Confidence            5999999999999975211         38999996

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=93.51  E-value=0.024  Score=51.62  Aligned_cols=30  Identities=30%  Similarity=0.455  Sum_probs=26.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.++|+||..+..
T Consensus       147 ~ivH~Dikp~NIl~~~-~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          147 RCVHRDLAARNILVES-EAHVKIADFGLAKL  176 (327)
T ss_dssp             TEECSCCSGGGEEEEE-TTEEEECCGGGCEE
T ss_pred             CccCCCCChhhEEECC-CCCEEEccccccee
Confidence            5899999999999986 68899999998864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=93.51  E-value=0.033  Score=50.68  Aligned_cols=29  Identities=28%  Similarity=0.391  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||++++ ++.+.|+||..+.
T Consensus       194 ~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~  222 (343)
T 1luf_A          194 KFVHRDLATRNCLVGE-NMVVKIADFGLSR  222 (343)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCSCHH
T ss_pred             CeecCCCCcceEEECC-CCeEEEeecCCCc
Confidence            5899999999999976 5789999998775

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=93.51  E-value=0.046  Score=49.33  Aligned_cols=30  Identities=27%  Similarity=0.314  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       158 ~i~H~dikp~NIli~~-~~~~kl~Dfg~~~~  187 (322)
T 1p4o_A          158 KFVHRDLAARNCMVAE-DFTVKIGDFGMTRD  187 (322)
T ss_dssp             TCBCSCCSGGGEEECT-TCCEEECCTTCCCG
T ss_pred             CCccCCCccceEEEcC-CCeEEECcCccccc
Confidence            5899999999999986 67899999998763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=93.50  E-value=0.055  Score=48.69  Aligned_cols=30  Identities=23%  Similarity=0.355  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       167 ~ivH~dikp~NIli~~-~~~~kl~Dfg~~~~  196 (313)
T 3brb_A          167 NFLHRDLAARNCMLRD-DMTVCVADFGLSKK  196 (313)
T ss_dssp             TCCCCCCSGGGEEECT-TSCEEECSCSCC--
T ss_pred             CcccCCCCcceEEEcC-CCcEEEeecCccee
Confidence            5899999999999986 57899999998764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=93.50  E-value=0.029  Score=52.31  Aligned_cols=30  Identities=23%  Similarity=0.455  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       128 givH~Dlkp~NIll~~-~~~~kl~DFG~s~~  157 (336)
T 3h4j_B          128 KIVHRDLKPENLLLDD-NLNVKIADFGLSNI  157 (336)
T ss_dssp             TCCCCCCSTTTEEECT-TCCEEECCSSCTBT
T ss_pred             CeEecCCchhhEEEcC-CCCEEEEEecccee
Confidence            5899999999999986 67899999998764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=93.50  E-value=0.025  Score=50.79  Aligned_cols=30  Identities=27%  Similarity=0.484  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||+++. ++.+.|+||..+..
T Consensus       145 ~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~  174 (318)
T 2dyl_A          145 GVIHRDVKPSNILLDE-RGQIKLCDFGISGR  174 (318)
T ss_dssp             CCCCCCCCGGGEEECT-TSCEEECCCTTC--
T ss_pred             CEEeCCCCHHHEEECC-CCCEEEEECCCchh
Confidence            6899999999999976 67899999998753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=93.48  E-value=0.062  Score=48.07  Aligned_cols=30  Identities=23%  Similarity=0.255  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       165 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~  194 (313)
T 1t46_A          165 NCIHRDLAARNILLTH-GRITKICDFGLARD  194 (313)
T ss_dssp             TCCCSCCSGGGEEEET-TTEEEECCCGGGSC
T ss_pred             CeecCCCccceEEEcC-CCCEEEcccccccc
Confidence            5899999999999986 68899999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=93.48  E-value=0.044  Score=50.73  Aligned_cols=30  Identities=20%  Similarity=0.463  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       134 ~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~  163 (328)
T 3fe3_A          134 RIVHRDLKAENLLLDA-DMNIKIADFGFSNE  163 (328)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECSTTCCGG
T ss_pred             CEeccCCCHHHEEEcC-CCCEEEeeccCcee
Confidence            5899999999999986 67899999998753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=93.47  E-value=0.063  Score=50.31  Aligned_cols=30  Identities=27%  Similarity=0.441  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||++++ ++.+.|+||..|..
T Consensus       148 ~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          148 GIIHRDLKPGNLAVNE-DCELKILDFGLARQ  177 (367)
T ss_dssp             TEECCCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CccccCcCHHHEEEcC-CCCEEEEeeecccc
Confidence            5899999999999986 67899999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=93.46  E-value=0.064  Score=47.75  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       130 ~i~H~dlkp~Nili~~-~~~~kl~Dfg~~~~  159 (287)
T 1u59_A          130 NFVHRDLAARNVLLVN-RHYAKISDFGLSKA  159 (287)
T ss_dssp             TEECCCCSGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CEeeCCCchheEEEcC-CCCEEECcccceee
Confidence            5899999999999986 68899999998864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=93.45  E-value=0.05  Score=50.93  Aligned_cols=30  Identities=23%  Similarity=0.402  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       138 ~ivHrDlkp~NIll~~-~g~vkL~DFG~a~~  167 (345)
T 1xjd_A          138 GIVYRDLKLDNILLDK-DGHIKIADFGMCKE  167 (345)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CeEeCCCChhhEEECC-CCCEEEeEChhhhh
Confidence            5899999999999986 68899999998864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=93.44  E-value=0.057  Score=47.75  Aligned_cols=36  Identities=31%  Similarity=0.314  Sum_probs=28.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhh
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFD   81 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fD   81 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..-....+
T Consensus       136 ~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~~~~~~~  171 (303)
T 1zy4_A          136 GIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLD  171 (303)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECCCCCCSCTTC---
T ss_pred             CeecccCCHHhEEEcC-CCCEEEeeCcchhhcccccc
Confidence            5899999999999976 67899999999876554433

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=93.44  E-value=0.07  Score=47.30  Aligned_cols=31  Identities=13%  Similarity=0.227  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||+++..++.+.|+||..+..
T Consensus       142 ~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~  172 (295)
T 2clq_A          142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKR  172 (295)
T ss_dssp             TEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred             CEEccCCChhhEEEECCCCCEEEeecccccc
Confidence            5899999999999986567899999988764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=93.44  E-value=0.049  Score=52.28  Aligned_cols=30  Identities=27%  Similarity=0.422  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       173 givHrDLKp~NILl~~-~g~ikL~DFGla~~  202 (396)
T 4dc2_A          173 GIIYRDLKLDNVLLDS-EGHIKLTDYGMCKE  202 (396)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CEEeccCCHHHEEECC-CCCEEEeecceeee
Confidence            5899999999999986 68899999998864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=93.44  E-value=0.065  Score=48.97  Aligned_cols=30  Identities=23%  Similarity=0.346  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       177 ~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~~  206 (334)
T 2pvf_A          177 KCIHRDLAARNVLVTE-NNVMKIADFGLARD  206 (334)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CeeCCCCccceEEEcC-CCCEEEcccccccc
Confidence            5899999999999976 67899999998863

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=93.43  E-value=0.055  Score=51.63  Aligned_cols=30  Identities=30%  Similarity=0.505  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       135 givHrDlkp~NIll~~-~g~vkL~DFG~a~~  164 (384)
T 4fr4_A          135 RIIHRDMKPDNILLDE-HGHVHITDFNIAAM  164 (384)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CceeccCcHHHeEECC-CCCEEEeccceeee
Confidence            5899999999999986 68899999998864

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=93.42  E-value=0.04  Score=50.37  Aligned_cols=31  Identities=26%  Similarity=0.502  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++. ++.+.|+||..+..
T Consensus       171 ~~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~  201 (348)
T 2pml_X          171 KNICHRDVKPSNILMDK-NGRVKLSDFGESEY  201 (348)
T ss_dssp             SCEECCCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCEeecCCChHhEEEcC-CCcEEEeccccccc
Confidence            57999999999999976 67899999998865

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=93.40  E-value=0.056  Score=47.86  Aligned_cols=31  Identities=26%  Similarity=0.382  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeee--CCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYD--ETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++  +..+.+.|+||..+..
T Consensus       125 ~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~  157 (296)
T 4hgt_A          125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence            489999999999993  2267899999998864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=93.40  E-value=0.056  Score=52.07  Aligned_cols=29  Identities=21%  Similarity=0.394  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++. ++.+.|+||..|.
T Consensus       188 givHrDLKp~NILl~~-~g~ikL~DFG~a~  216 (410)
T 3v8s_A          188 GFIHRDVKPDNMLLDK-SGHLKLADFGTCM  216 (410)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCE
T ss_pred             CeEeccCCHHHeeECC-CCCEEEeccceeE
Confidence            5899999999999986 6889999999885

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=93.40  E-value=0.065  Score=47.59  Aligned_cols=32  Identities=9%  Similarity=0.223  Sum_probs=25.6

Q ss_pred             eeeeecCCCCCCeeeeCC----CCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDET----EDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~----~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++.+    ...+.|+||..|..
T Consensus       125 ~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A          125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            358999999999999752    12399999998864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=93.40  E-value=0.068  Score=48.02  Aligned_cols=30  Identities=30%  Similarity=0.495  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       145 ~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~  174 (314)
T 3com_A          145 RKIHRDIKAGNILLNT-EGHAKLADFGVAGQ  174 (314)
T ss_dssp             TEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCcCCCcCHHHEEECC-CCCEEEeecccchh
Confidence            5799999999999976 67899999998854

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=93.38  E-value=0.068  Score=47.86  Aligned_cols=30  Identities=27%  Similarity=0.451  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       139 ~i~H~dl~p~Nil~~~-~~~~kl~Dfg~~~~  168 (303)
T 3a7i_A          139 KKIHRDIKAANVLLSE-HGEVKLADFGVAGQ  168 (303)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCccCCCChheEEECC-CCCEEEeeccccee
Confidence            5899999999999976 67899999998864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=93.38  E-value=0.07  Score=47.47  Aligned_cols=30  Identities=23%  Similarity=0.483  Sum_probs=26.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       144 ~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~  173 (298)
T 1phk_A          144 NIVHRDLKPENILLDD-DMNIKLTDFGFSCQ  173 (298)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CcccCCCCcceEEEcC-CCcEEEecccchhh
Confidence            5899999999999976 67899999998864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=93.37  E-value=0.058  Score=49.27  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       144 ~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~~  173 (331)
T 4aaa_A          144 NIIHRDIKPENILVSQ-SGVVKLCDFGFART  173 (331)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECCCTTC--
T ss_pred             CEEccCcChheEEEcC-CCcEEEEeCCCcee
Confidence            5899999999999976 67899999998864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=93.35  E-value=0.028  Score=49.86  Aligned_cols=31  Identities=26%  Similarity=0.344  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.+.|+||..+...
T Consensus       141 ~i~H~dikp~Nili~~-~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A          141 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRAL  171 (291)
T ss_dssp             TEECSCCCGGGEEEEE-TTEEEECCCTTCEEC
T ss_pred             CcccCCCchheEEEcC-CCCEEEccccccccc
Confidence            5899999999999986 688999999987643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=93.34  E-value=0.041  Score=50.33  Aligned_cols=29  Identities=24%  Similarity=0.413  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.|||+++ ++.+.|+||..|.
T Consensus       137 ~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~  165 (327)
T 3poz_A          137 RLVHRDLAARNVLVKT-PQHVKITDFGLAK  165 (327)
T ss_dssp             TCCCSCCCGGGEEEEE-TTEEEECCTTHHH
T ss_pred             CeeCCCCChheEEECC-CCCEEEccCccee
Confidence            5899999999999986 6889999997764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=93.31  E-value=0.043  Score=49.23  Aligned_cols=30  Identities=30%  Similarity=0.393  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       168 ~i~H~dikp~Nil~~~-~~~~kl~Dfg~~~~  197 (316)
T 2xir_A          168 KCIHRDLAARNILLSE-KNVVKICDFGLARD  197 (316)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCGGGSC
T ss_pred             CcccccCccceEEECC-CCCEEECCCccccc
Confidence            5899999999999976 57899999998864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=93.27  E-value=0.053  Score=50.46  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..+..
T Consensus       179 ~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          179 GIIYRDIKLENILLDS-NGHVVLTDFGLSKE  208 (355)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEESCSSEEEE
T ss_pred             CcccCCCCHHHEEECC-CCcEEEeeCCCCee
Confidence            5899999999999986 67899999998863

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=93.27  E-value=0.056  Score=49.81  Aligned_cols=29  Identities=31%  Similarity=0.557  Sum_probs=24.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++. ++.+.|+||..+.
T Consensus       154 ~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~  182 (362)
T 3pg1_A          154 GVVHRDLHPGNILLAD-NNDITICDFNLAR  182 (362)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECCTTC--
T ss_pred             cCEecCCChHHEEEcC-CCCEEEEecCccc
Confidence            5899999999999976 6789999999886

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=93.27  E-value=0.037  Score=49.02  Aligned_cols=30  Identities=27%  Similarity=0.405  Sum_probs=26.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       131 ~i~H~dikp~Nil~~~-~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A          131 NFIHRDLAARNCLVGE-NHLVKVADFGLSRL  160 (288)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCCGGGT
T ss_pred             CccCCCCCcceEEEcC-CCCEEEccCcccee
Confidence            5899999999999976 57899999998864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=93.26  E-value=0.067  Score=47.16  Aligned_cols=31  Identities=23%  Similarity=0.405  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeee--CCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYD--ETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++.  +.++.+.|+||..+..
T Consensus       126 ~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A          126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            489999999999992  2357899999998864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=93.25  E-value=0.061  Score=51.82  Aligned_cols=30  Identities=20%  Similarity=0.338  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       182 giiHrDLKp~NILld~-~g~vkL~DFGla~~  211 (412)
T 2vd5_A          182 GYVHRDIKPDNILLDR-CGHIRLADFGSCLK  211 (412)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeeecccCHHHeeecC-CCCEEEeechhhee
Confidence            5899999999999986 68899999998854

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=93.23  E-value=0.068  Score=48.22  Aligned_cols=32  Identities=22%  Similarity=0.353  Sum_probs=27.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      .++|+|++|.||+++. ++.+.|+||..+....
T Consensus       140 gi~H~dlkp~Nili~~-~~~~kl~Dfg~~~~~~  171 (326)
T 1blx_A          140 RVVHRDLKPQNILVTS-SGQIKLADFGLARIYS  171 (326)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECSCCSCCCCC
T ss_pred             CceeccCCHHHeEEcC-CCCEEEecCccccccc
Confidence            5899999999999976 6789999999887543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=93.23  E-value=0.023  Score=50.14  Aligned_cols=58  Identities=16%  Similarity=0.143  Sum_probs=43.7

Q ss_pred             chhhhhcCCCCceEEEecCc----eEEEeecCccCCCC--CCCC-cccHHHHHHHHHhhcccCCC
Q psy8745         188 PQILHRAGLAPRLYAEFDNG----LVYQYVRGVTITPD--SIRE-PHIHPLVARNMARLHKVHSN  245 (317)
Q Consensus       188 ~~~L~~~~~gp~l~g~F~nG----~~e~fi~g~tL~~~--~l~~-~~i~~~IA~~la~~H~~~~~  245 (317)
                      ++.|+.....|++++.+.++    +|.+||+|++|...  +..+ ..+...+|+.|+++|.+.++
T Consensus        63 l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~  127 (263)
T 3tm0_A           63 MLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDIS  127 (263)
T ss_dssp             HHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             HHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcc
Confidence            34455555689999988777    89999999998643  1223 36788999999999997654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=93.22  E-value=0.046  Score=49.72  Aligned_cols=30  Identities=17%  Similarity=0.202  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       184 ~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~~  213 (333)
T 2i1m_A          184 NCIHRDVAARNVLLTN-GHVAKIGDFGLARD  213 (333)
T ss_dssp             TEECSCCSGGGCEEEG-GGEEEBCCCGGGCC
T ss_pred             CcccCCcccceEEECC-CCeEEECccccccc
Confidence            5899999999999986 67899999998864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=93.20  E-value=0.066  Score=50.15  Aligned_cols=33  Identities=18%  Similarity=0.292  Sum_probs=27.2

Q ss_pred             CeeeeecCCCCCCeeeeC-CCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDE-TEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~-~~~~l~lIDfEya~~   75 (317)
                      ...++|+||+|.|||++. ..+.+.|+||..|..
T Consensus       177 ~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~  210 (382)
T 2vx3_A          177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ  210 (382)
T ss_dssp             TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             CCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence            467999999999999953 246799999998864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=93.19  E-value=0.069  Score=47.65  Aligned_cols=31  Identities=16%  Similarity=0.222  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|+++.||+++. ++.+.|+||..+...
T Consensus       129 ~i~H~dlkp~NIl~~~-~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C          129 GIVHKDIKPGNLLLTT-GGTLKISALGVAEAL  159 (305)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             CeeecCCCcccEEEcC-CCcEEeecccccccc
Confidence            5899999999999976 688999999988643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=93.19  E-value=0.062  Score=52.22  Aligned_cols=29  Identities=21%  Similarity=0.399  Sum_probs=25.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++. ++.+.|+||..|.
T Consensus       195 giiHrDLKp~NILl~~-~g~vkL~DFGla~  223 (437)
T 4aw2_A          195 HYVHRDIKPDNILMDM-NGHIRLADFGSCL  223 (437)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCE
T ss_pred             CeEecccCHHHeeEcC-CCCEEEcchhhhh
Confidence            4899999999999986 6889999998874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=93.19  E-value=0.021  Score=51.04  Aligned_cols=29  Identities=24%  Similarity=0.402  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++. ++.+.|+||..+.
T Consensus       120 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~  148 (288)
T 1ob3_A          120 RVLHRDLKPQNLLINR-EGELKIADFGLAR  148 (288)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECCTTHHH
T ss_pred             CeecCCCCHHHEEEcC-CCCEEEeECcccc
Confidence            5899999999999976 6889999998774

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=93.18  E-value=0.063  Score=49.84  Aligned_cols=31  Identities=26%  Similarity=0.474  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeC-CCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDE-TEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~-~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ..+.+.|+||..|..
T Consensus       172 ~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~  203 (364)
T 3op5_A          172 EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR  203 (364)
T ss_dssp             TEECCCCCGGGEEEESSCTTCEEECCCTTCEE
T ss_pred             CeEEecCCHHHEEEecCCCCeEEEEECCccee
Confidence            6899999999999982 267899999998854

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=93.18  E-value=0.057  Score=49.58  Aligned_cols=30  Identities=23%  Similarity=0.362  Sum_probs=24.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       167 ~ivH~Dikp~NIl~~~-~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          167 NYVHRDLAARNILVNS-NLVCKVSDFGLSRV  196 (333)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECCCCC---
T ss_pred             CeeCCCCChheEEECC-CCcEEECCCCcchh
Confidence            5899999999999986 67899999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=93.17  E-value=0.066  Score=50.19  Aligned_cols=30  Identities=20%  Similarity=0.307  Sum_probs=26.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|+||..+..
T Consensus       233 ~ivHrDlkp~Nil~~~-~~~~kl~DfG~s~~  262 (377)
T 3cbl_A          233 CCIHRDLAARNCLVTE-KNVLKISDFGMSRE  262 (377)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCGGGCEE
T ss_pred             CcCCcccCHHHEEEcC-CCcEEECcCCCcee
Confidence            4899999999999976 67899999998753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=93.16  E-value=0.081  Score=47.76  Aligned_cols=39  Identities=8%  Similarity=-0.175  Sum_probs=33.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHH
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIAN   84 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn   84 (317)
                      .++|+|++|+|||+++ ++.+.+++..|.+...+.-|+=.
T Consensus       149 givH~Dikp~NIll~~-~g~~kl~~~~~~~~~~~~~Di~s  187 (286)
T 3uqc_A          149 GVALSIDHPSRVRVSI-DGDVVLAYPATMPDANPQDDIRG  187 (286)
T ss_dssp             TCCCCCCSGGGEEEET-TSCEEECSCCCCTTCCHHHHHHH
T ss_pred             CCccCCCCcccEEEcC-CCCEEEEeccccCCCCchhHHHH
Confidence            5899999999999986 68899999999888877777643

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=93.13  E-value=0.057  Score=48.85  Aligned_cols=30  Identities=23%  Similarity=0.336  Sum_probs=24.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       154 ~i~H~dlkp~NIl~~~-~~~~kl~Dfg~~~~  183 (309)
T 2h34_A          154 GATHRDVKPENILVSA-DDFAYLVDFGIASA  183 (309)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECSCCC---
T ss_pred             cCCcCCCChHHEEEcC-CCCEEEecCccCcc
Confidence            5899999999999986 67899999998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=93.11  E-value=0.069  Score=48.62  Aligned_cols=31  Identities=29%  Similarity=0.474  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+...
T Consensus       165 ~ivH~dikp~NIli~~-~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          165 RYIHRDLATRNILVEN-ENRVKIGDFGLTKVL  195 (326)
T ss_dssp             TEECSCCCGGGEEEEE-TTEEEECCCTTCEEC
T ss_pred             CEeccCCCcceEEEcC-CCcEEEecCcchhhc
Confidence            5899999999999986 688999999988643

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=93.09  E-value=0.067  Score=49.30  Aligned_cols=30  Identities=27%  Similarity=0.438  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       146 ~ivH~dlkp~NIl~~~-~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          146 GVVHRDLKPGNLAVNE-DCELKILDFGLARH  175 (353)
T ss_dssp             TCCCSSCCGGGEEECT-TCCEEECSTTCTTC
T ss_pred             CcccCCCCHHHEeECC-CCcEEEeecccccC
Confidence            5899999999999986 67899999998875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=93.07  E-value=0.064  Score=52.28  Aligned_cols=30  Identities=23%  Similarity=0.377  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       184 ~iiHrDlkp~NIll~~-~~~~kl~DFG~a~~  213 (464)
T 3ttj_A          184 GIIHRDLKPSNIVVKS-DCTLKILDFGLART  213 (464)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECCCCCC--
T ss_pred             CcccCCCChHhEEEeC-CCCEEEEEEEeeee
Confidence            5899999999999986 67899999998864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=93.05  E-value=0.029  Score=54.11  Aligned_cols=31  Identities=23%  Similarity=0.291  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.++||-.|..
T Consensus       177 ~~iiHRDlKP~NIl~~~-~~~~Ki~DFGla~~  207 (398)
T 4b99_A          177 AQVIHRDLKPSNLLVNE-NCELKIGDFGMARG  207 (398)
T ss_dssp             TTCBCCCCCGGGEEECT-TCCEEECCCTTCBC
T ss_pred             CcCcCCCcCccccccCC-CCCEEEeecceeee
Confidence            35789999999999986 68899999988863

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=93.03  E-value=0.06  Score=49.14  Aligned_cols=30  Identities=17%  Similarity=0.256  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCCCCe-----EEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDK-----VTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~-----l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.     +.|+||..|..
T Consensus       125 ~iiHrDlkp~Nill~~-~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A          125 NLIYRDVKPENFLIGR-PGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             TEECCCCCGGGEEECC-GGGTCTTSEEECCCTTCEE
T ss_pred             CeeccCCCHHHeeecc-CCCCCCceEEEEEccccee
Confidence            5899999999999975 344     99999998864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=93.01  E-value=0.049  Score=49.95  Aligned_cols=30  Identities=30%  Similarity=0.393  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..|..
T Consensus       213 ~ivH~Dikp~NIll~~-~~~~kl~Dfg~a~~  242 (359)
T 3vhe_A          213 KCIHRDLAARNILLSE-KNVVKICDFGLARD  242 (359)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCGGGSC
T ss_pred             CcccCCCChhhEEEcC-CCcEEEEeccceee
Confidence            5899999999999976 57899999998864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=93.00  E-value=0.068  Score=49.94  Aligned_cols=31  Identities=23%  Similarity=0.362  Sum_probs=24.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.+.|+||..|...
T Consensus       147 ~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          147 GIIHRDLKPSNIVVKS-DCTLKILDFGLARTA  177 (371)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECCCCC----
T ss_pred             CeecccCCHHHEEEcC-CCCEEEEEeeccccc
Confidence            5899999999999986 678999999988643

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=92.99  E-value=0.069  Score=50.11  Aligned_cols=30  Identities=23%  Similarity=0.366  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|+||..|..
T Consensus       211 ~ivH~Dlkp~NIll~~-~~~~kL~DFG~a~~  240 (382)
T 3tt0_A          211 KCIHRDLAARNVLVTE-DNVMKIADFGLARD  240 (382)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECSCSCCCC
T ss_pred             CEecCCCCcceEEEcC-CCcEEEcccCcccc
Confidence            5899999999999986 67899999998863

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=92.98  E-value=0.024  Score=51.17  Aligned_cols=32  Identities=19%  Similarity=0.340  Sum_probs=27.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      .++|+|++|.||++++ ++.+.|+||..+....
T Consensus       158 ~ivH~Dikp~NIl~~~-~~~~kl~Dfg~~~~~~  189 (337)
T 3ll6_A          158 PIIHRDLKVENLLLSN-QGTIKLCDFGSATTIS  189 (337)
T ss_dssp             CCBCCCCCGGGCEECT-TSCEEBCCCTTCBCCS
T ss_pred             CEEEccCCcccEEECC-CCCEEEecCccceecc
Confidence            4899999999999986 6789999999887543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=92.94  E-value=0.057  Score=47.50  Aligned_cols=32  Identities=19%  Similarity=0.339  Sum_probs=27.5

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|+++.||+++. ++.+.|+||..+...
T Consensus       130 ~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A          130 HMVVHRDLKPENVLLDA-HMNAKIADFGLSNMM  161 (276)
T ss_dssp             HCSSCCCCCGGGEEECT-TSCEEECCCCGGGCC
T ss_pred             CCCccCCCChhhEEECC-CCCEEEeeccccccc
Confidence            35899999999999986 678999999988654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=92.92  E-value=0.087  Score=49.04  Aligned_cols=31  Identities=29%  Similarity=0.414  Sum_probs=27.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.||++++ ++.+.|+||..+...
T Consensus       174 ~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~  204 (348)
T 1u5q_A          174 NMIHRDVKAGNILLSE-PGLVKLGDFGSASIM  204 (348)
T ss_dssp             TCBCCCCSGGGEEEET-TTEEEECCCTTCBSS
T ss_pred             CeeeCCCCHHHEEECC-CCCEEEeeccCceec
Confidence            4899999999999986 688999999988653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=92.89  E-value=0.092  Score=47.14  Aligned_cols=30  Identities=20%  Similarity=0.463  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++..  ++.+.|+||..+.
T Consensus       137 ~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~  168 (299)
T 3m2w_A          137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK  168 (299)
T ss_dssp             TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             CcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence            49999999999999753  4679999998774

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=92.88  E-value=0.03  Score=51.10  Aligned_cols=29  Identities=21%  Similarity=0.390  Sum_probs=23.3

Q ss_pred             eeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ++|+|++|.||++++ ++.+.|+||..+..
T Consensus       160 ivH~Dikp~NIll~~-~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          160 IVHRNLKSPNLLVDK-KYTVKVCDFGLSRL  188 (309)
T ss_dssp             CCCTTCCGGGEEECT-TCCEEECCCC----
T ss_pred             EECCCCChhhEEEeC-CCcEEECCCCCCcc
Confidence            899999999999986 67899999988764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=92.86  E-value=0.071  Score=50.07  Aligned_cols=30  Identities=23%  Similarity=0.371  Sum_probs=21.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||++++ ++.+.|+||..|..
T Consensus       152 givH~Dlkp~NIll~~-~~~~kL~DFG~a~~  181 (367)
T 2fst_X          152 DIIHRDLKPSNLAVNE-DCELKILDFGLARH  181 (367)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECC------
T ss_pred             CeeeCCCCHhhEEECC-CCCEEEeecccccc
Confidence            5899999999999986 67899999998864

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=92.84  E-value=0.075  Score=47.12  Aligned_cols=31  Identities=26%  Similarity=0.382  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeee--CCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYD--ETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++  +.++.+.|+||..+..
T Consensus       125 ~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  157 (296)
T 3uzp_A          125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  157 (296)
T ss_dssp             TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence            589999999999994  2357899999998864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=92.80  E-value=0.071  Score=47.18  Aligned_cols=31  Identities=16%  Similarity=0.210  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCCCCe--------EEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDK--------VTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~--------l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.        +.++||..+...
T Consensus       133 ~ivH~Dlkp~NIll~~-~~~~~~~~~~~~kl~Dfg~~~~~  171 (289)
T 4fvq_A          133 TLIHGNVCAKNILLIR-EEDRKTGNPPFIKLSDPGISITV  171 (289)
T ss_dssp             TCCCCCCCGGGEEEEE-CCBGGGTBCCEEEECCCCSCTTT
T ss_pred             CeECCCcCcceEEEec-CCcccccccceeeeccCcccccc
Confidence            4899999999999976 343        999999988644

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=92.78  E-value=0.091  Score=46.34  Aligned_cols=31  Identities=19%  Similarity=0.245  Sum_probs=25.1

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.+  .+.+.|+||..+..
T Consensus       125 ~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~  157 (284)
T 3kk8_A          125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  157 (284)
T ss_dssp             TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence            58999999999999752  23499999998753

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=92.78  E-value=0.067  Score=50.31  Aligned_cols=30  Identities=23%  Similarity=0.348  Sum_probs=22.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..
T Consensus       167 ~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          167 GYVHRDLAARNILINS-NLVCKVSDFGLGRV  196 (373)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECCC-----
T ss_pred             CeeCCCCCcceEEEcC-CCCEEECcCccccc
Confidence            4899999999999986 67899999988764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=92.77  E-value=0.058  Score=48.03  Aligned_cols=29  Identities=24%  Similarity=0.405  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++. ++.+.|+||..+.
T Consensus       123 ~i~H~dlkp~Nili~~-~~~~kl~dfg~~~  151 (299)
T 2r3i_A          123 RVLHRDLKPQNLLINT-EGAIKLADFGLAR  151 (299)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECSTTHHH
T ss_pred             CccCCCCCHHHeEEcC-CCCEEECcchhhh
Confidence            5899999999999986 6789999998764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=92.77  E-value=0.093  Score=49.88  Aligned_cols=32  Identities=19%  Similarity=0.420  Sum_probs=26.9

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~n   76 (317)
                      .++|+||++.|||++..  ++.+.|+||..|...
T Consensus       181 ~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          181 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  214 (400)
T ss_dssp             TEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             CccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence            58999999999999753  467999999988743

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=92.74  E-value=0.056  Score=47.21  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+...
T Consensus       124 ~i~H~dl~p~Nili~~-~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A          124 CVIHRDLAARNCLVGE-NQVIKVSDFGMTRFV  154 (267)
T ss_dssp             TCCCSSCCGGGEEECG-GGCEEECCTTGGGGB
T ss_pred             CcccCCCchheEEECC-CCCEEEccccccccc
Confidence            4899999999999976 578999999988754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=92.72  E-value=0.041  Score=50.52  Aligned_cols=32  Identities=25%  Similarity=0.348  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCC-CCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDET-EDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++.+ ++.+.|+||..+..-
T Consensus       122 givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A          122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence            68999999999999753 478999999988643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=92.71  E-value=0.099  Score=46.99  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++. ++.+.|+||..+...
T Consensus       154 ~ivH~dlkp~NIl~~~-~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          154 GYAHRDLKPTNILLGD-EGQPVLMDLGSMNQA  184 (317)
T ss_dssp             TEECCCCCGGGEEECT-TSCEEECCCSSCEES
T ss_pred             CcccCCCCHHHEEEcC-CCCEEEEecCcchhc
Confidence            5899999999999976 678999999977643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=92.66  E-value=0.071  Score=47.34  Aligned_cols=31  Identities=26%  Similarity=0.394  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++.+.|+||..+..-
T Consensus       141 ~i~H~dl~p~Nil~~~-~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A          141 GQIHRDVKAGNILLGE-DGSVQIADFGVSAFL  171 (303)
T ss_dssp             TCCCCCCSGGGEEECT-TCCEEECCCHHHHHC
T ss_pred             CCCCCCCChhhEEEcC-CCCEEEEeccchhee
Confidence            5799999999999976 678999999877543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=92.65  E-value=0.035  Score=48.73  Aligned_cols=30  Identities=23%  Similarity=0.323  Sum_probs=23.6

Q ss_pred             eeecCCCCCCeeeeCC-------CCeEEEEeeccccC
Q psy8745          46 FCHNDLLLGNIIYDET-------EDKVTFIDYEYAGV   75 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~-------~~~l~lIDfEya~~   75 (317)
                      ++|+|++|.||+++..       .+.+.|+||..+..
T Consensus       129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~  165 (271)
T 3dtc_A          129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE  165 (271)
T ss_dssp             CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred             eeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence            8999999999999742       46799999988763

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=92.58  E-value=0.1  Score=48.70  Aligned_cols=57  Identities=9%  Similarity=0.179  Sum_probs=41.8

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC----------CCCcchHHHHHHHhhcccc
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM----------KTPKLWSTGKHMLSLIPRT  265 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~----------~~p~lw~~i~kwl~~~~~~  265 (317)
                      ++.+||+|+++.... .++.....+++.||+||....+.          -.+.....+.+|+..+...
T Consensus        98 ~l~~~i~G~~~~~~~-~~~~~~~~lg~~La~LH~~~~~~~~~~~~~~~~~~~~w~~~i~~~l~~~~~~  164 (339)
T 3i1a_A           98 IAYPFIHAPNGFTQN-LTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPKWREIVRSFYNQIEFD  164 (339)
T ss_dssp             EEEECCCCCBTTTSC-CCHHHHHHHHHHHHHHHTCCCCHHHHTTSEECCCCCHHHHHHHHHGGGGSCC
T ss_pred             EEEeccCCCcCcccC-CCHHHHHHHHHHHHHHhCcCCCCCCccCccccccCcchHHHHHHHHHhhhcc
Confidence            689999999995433 45777889999999999986531          1223456788898877653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=92.58  E-value=0.1  Score=48.86  Aligned_cols=29  Identities=14%  Similarity=0.174  Sum_probs=25.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++. ++.+.++||..+.
T Consensus       148 ~ivHrDlkp~NIll~~-~~~~kl~dfg~~~  176 (389)
T 3gni_B          148 GYVHRSVKASHILISV-DGKVYLSGLRSNL  176 (389)
T ss_dssp             TEECCCCSGGGEEECT-TCCEEECCGGGCE
T ss_pred             CeecCCCCHHHEEEcC-CCCEEEcccccce
Confidence            4899999999999986 6889999997653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=92.56  E-value=0.08  Score=49.43  Aligned_cols=30  Identities=27%  Similarity=0.438  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       164 ~ivH~Dikp~NIll~~-~~~~kL~Dfg~a~~  193 (371)
T 4exu_A          164 GVVHRDLKPGNLAVNE-DCELKILDFGLARH  193 (371)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECSTTCC--
T ss_pred             CCcCCCcCHHHeEECC-CCCEEEEecCcccc
Confidence            5899999999999986 67899999998863

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=92.47  E-value=0.09  Score=54.56  Aligned_cols=30  Identities=30%  Similarity=0.310  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. +|.|.|+||-.|.
T Consensus       311 ~gIiHRDLKPeNILld~-~G~vKL~DFGlA~  340 (689)
T 3v5w_A          311 RFVVYRDLKPANILLDE-HGHVRISDLGLAC  340 (689)
T ss_dssp             TTEECCCCSGGGEEECT-TSCEEECCCTTCE
T ss_pred             CCccccCCchHHeEEeC-CCCEEecccceee
Confidence            46999999999999986 6899999998875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=92.45  E-value=0.077  Score=48.04  Aligned_cols=31  Identities=19%  Similarity=0.222  Sum_probs=24.6

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+|++|.||+++.+...+.|+||..+.
T Consensus       124 ~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A          124 KALIHRDLKPPNLLLVAGGTVLKICDFGTAC  154 (307)
T ss_dssp             SCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred             CCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence            5789999999999998643347999999885

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=92.44  E-value=0.11  Score=53.26  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       462 gIiHrDLKp~NILl~~-~g~ikL~DFGla~~  491 (674)
T 3pfq_A          462 GIIYRDLKLDNVMLDS-EGHIKIADFGMCKE  491 (674)
T ss_dssp             SEECCCCCSTTEEECS-SSCEEECCCTTCEE
T ss_pred             CeEeccCChhhEEEcC-CCcEEEeecceeec
Confidence            5899999999999986 68899999998763

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=92.43  E-value=0.076  Score=48.26  Aligned_cols=30  Identities=27%  Similarity=0.355  Sum_probs=26.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++. ++.+.|+||..+..
T Consensus       162 ~ivH~dlkp~NIl~~~-~~~~kL~Dfg~~~~  191 (327)
T 1fvr_A          162 QFIHRDLAARNILVGE-NYVAKIADFGLSRG  191 (327)
T ss_dssp             TEECSCCSGGGEEECG-GGCEEECCTTCEES
T ss_pred             CccCCCCccceEEEcC-CCeEEEcccCcCcc
Confidence            5899999999999976 57899999998763

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=92.43  E-value=0.091  Score=47.18  Aligned_cols=30  Identities=17%  Similarity=0.192  Sum_probs=22.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|+++.||+++. ++.+.|+||..+..
T Consensus       156 ~i~H~dl~p~NIl~~~-~~~~kl~Dfg~~~~  185 (310)
T 2wqm_A          156 RVMHRDIKPANVFITA-TGVVKLGDLGLGRF  185 (310)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECCC-----
T ss_pred             CeeCCCCcHHHEEEcC-CCCEEEEeccceee
Confidence            5899999999999986 67899999998764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=92.43  E-value=0.089  Score=48.41  Aligned_cols=31  Identities=23%  Similarity=0.307  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      .++|+|++|.|||++  ++.+.|+||..|..-.
T Consensus       128 ~iiHrDikp~NIll~--~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A          128 GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             TCCCCCCCGGGEEEE--TTEEEECCCSSSCCC-
T ss_pred             CeecCCCCcceEEEE--CCcEEEeecccccccC
Confidence            489999999999997  4789999999887543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=92.37  E-value=0.1  Score=48.00  Aligned_cols=31  Identities=23%  Similarity=0.408  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCC-CeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETE-DKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~-~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.+. +.+.|+||..|..
T Consensus       171 ~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~  202 (345)
T 2v62_A          171 EYVHGDIKAANLLLGYKNPDQVYLADYGLSYR  202 (345)
T ss_dssp             TEECSCCSGGGEEEESSSTTSEEECCCTTCEE
T ss_pred             CeeCCCcCHHHEEEccCCCCcEEEEeCCCcee
Confidence            589999999999998631 3899999998854

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=92.35  E-value=0.11  Score=47.43  Aligned_cols=32  Identities=19%  Similarity=0.272  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeC--CCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDE--TEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++.  ..+.+.|+||..+..-
T Consensus       151 givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred             CeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence            5899999999999964  2468999999988754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=92.35  E-value=0.039  Score=48.94  Aligned_cols=29  Identities=24%  Similarity=0.349  Sum_probs=24.3

Q ss_pred             eeecCCCCCCeeeeCCCCe-----EEEEeeccccC
Q psy8745          46 FCHNDLLLGNIIYDETEDK-----VTFIDYEYAGV   75 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~~~~-----l~lIDfEya~~   75 (317)
                      ++|+|++|.||+++. .+.     +.|+||..+..
T Consensus       145 ivH~dikp~Nil~~~-~~~~~~~~~kl~Dfg~~~~  178 (287)
T 4f0f_A          145 IVHRDLRSPNIFLQS-LDENAPVCAKVADFGLSQQ  178 (287)
T ss_dssp             CBCSCCSGGGEEESC-CCTTCSCCEEECCCTTCBC
T ss_pred             eecCCCCcceEEEec-cCCCCceeEEeCCCCcccc
Confidence            899999999999975 333     89999988763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=92.33  E-value=0.11  Score=47.21  Aligned_cols=30  Identities=17%  Similarity=0.519  Sum_probs=25.1

Q ss_pred             eeeecCCCCCCeeeeCCC-CeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETE-DKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~-~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++.+. ..+.|+||..+.
T Consensus       188 ~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~  218 (345)
T 3hko_A          188 GICHRDIKPENFLFSTNKSFEIKLVDFGLSK  218 (345)
T ss_dssp             TEECCCCCGGGEEESCSSSCCEEECCCTTCE
T ss_pred             CccccCCChhhEEEecCCCceEEEeeccccc
Confidence            489999999999997522 279999998876

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=92.32  E-value=0.11  Score=47.75  Aligned_cols=32  Identities=22%  Similarity=0.502  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCC--CeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETE--DKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++.++  ..+.|+||..+...
T Consensus       126 ~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A          126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK  159 (325)
T ss_dssp             TEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred             CCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence            589999999999997532  27999999988643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=92.30  E-value=0.082  Score=47.09  Aligned_cols=29  Identities=24%  Similarity=0.469  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++. ++.+.|+||..+.
T Consensus       137 ~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~  165 (302)
T 2j7t_A          137 RIIHRDLKAGNVLMTL-EGDIRLADFGVSA  165 (302)
T ss_dssp             TCCCCCCSGGGEEECT-TSCEEECCCHHHH
T ss_pred             CcccCCCCHHHEEECC-CCCEEEEECCCCc
Confidence            5899999999999976 6789999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=92.24  E-value=0.086  Score=49.68  Aligned_cols=29  Identities=34%  Similarity=0.465  Sum_probs=22.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||++++ ++.+.|+||..+.
T Consensus       212 ~ivHrDlkp~NIll~~-~~~~kL~DFG~a~  240 (373)
T 3c1x_A          212 KFVHRDLAARNCMLDE-KFTVKVADFGLAR  240 (373)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECCC----
T ss_pred             CEecCccchheEEECC-CCCEEEeeccccc
Confidence            5899999999999986 6789999998876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=92.09  E-value=0.06  Score=49.82  Aligned_cols=16  Identities=25%  Similarity=0.333  Sum_probs=14.7

Q ss_pred             eeeecCCCCCCeeeeC
Q psy8745          45 VFCHNDLLLGNIIYDE   60 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~   60 (317)
                      .++|+||+|.|||++.
T Consensus       167 givHrDikp~NIll~~  182 (397)
T 1wak_A          167 RIIHTDIKPENILLSV  182 (397)
T ss_dssp             CEECCCCSGGGEEECC
T ss_pred             CEecCCCCHHHeeEec
Confidence            6999999999999975

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=92.08  E-value=0.096  Score=51.59  Aligned_cols=30  Identities=27%  Similarity=0.470  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeee--CCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYD--ETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~   74 (317)
                      .++|+||++.|||++  ...+.++|+||..|.
T Consensus       123 gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A          123 SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            589999999999994  236789999999875

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=92.07  E-value=0.1  Score=48.67  Aligned_cols=31  Identities=29%  Similarity=0.653  Sum_probs=24.8

Q ss_pred             eeeeecCCCCCCeeeeCC-CCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDET-EDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.||+++.+ .+.+.|+||..|.
T Consensus       135 ~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A          135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             CCcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence            358999999999999753 2359999999876

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=92.06  E-value=0.12  Score=50.92  Aligned_cols=31  Identities=19%  Similarity=0.373  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.||+++. ++.+.|+||..+..
T Consensus       135 ~givHrDLkp~NIll~~-~~~vkL~DFG~a~~  165 (476)
T 2y94_A          135 HMVVHRDLKPENVLLDA-HMNAKIADFGLSNM  165 (476)
T ss_dssp             TTEECSCCSGGGEEECT-TCCEEECCCSSCEE
T ss_pred             CCCCcccccHHHEEEec-CCCeEEEeccchhh
Confidence            35899999999999986 67899999998864

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=92.02  E-value=0.11  Score=48.79  Aligned_cols=29  Identities=24%  Similarity=0.290  Sum_probs=23.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       178 ~iiHRDLKp~NILl~~-~~~~Ki~DFGla~  206 (329)
T 4aoj_A          178 HFVHRDLATRNCLVGQ-GLVVKIGDFGMSR  206 (329)
T ss_dssp             TCCCSCCCGGGEEEET-TTEEEECCCC---
T ss_pred             CeecccccHhhEEECC-CCcEEEcccccce
Confidence            4799999999999986 6889999998775

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=92.00  E-value=0.14  Score=45.87  Aligned_cols=31  Identities=23%  Similarity=0.433  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCC------------------CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET------------------EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~------------------~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++..                  .+.+.|+||..+..
T Consensus       138 ~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  186 (339)
T 1z57_A          138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY  186 (339)
T ss_dssp             TEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEE
T ss_pred             CCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCccccc
Confidence            58999999999999652                  34699999998864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=91.97  E-value=0.099  Score=49.34  Aligned_cols=32  Identities=25%  Similarity=0.302  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeee---CCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYD---ETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~---~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||+.   ...+.+.|+||..|..-
T Consensus       148 ~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             CEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence            489999999999993   22578999999988743

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=91.94  E-value=0.14  Score=47.07  Aligned_cols=32  Identities=28%  Similarity=0.505  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeC------------------------CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE------------------------TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~------------------------~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||++.                        ..+.+.|+||..|..
T Consensus       156 ~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~  211 (360)
T 3llt_A          156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF  211 (360)
T ss_dssp             TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred             CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCcee
Confidence            35899999999999963                        257799999998864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=91.93  E-value=0.12  Score=46.07  Aligned_cols=31  Identities=29%  Similarity=0.550  Sum_probs=25.9

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++++.  .+.+.|+||..+..
T Consensus       144 ~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~  176 (285)
T 3is5_A          144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL  176 (285)
T ss_dssp             TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred             CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence            58999999999999532  46799999998864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=91.91  E-value=0.11  Score=46.59  Aligned_cols=29  Identities=31%  Similarity=0.518  Sum_probs=24.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++  ++.+.|+||..+..
T Consensus       150 ~i~H~dlkp~NIl~~--~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          150 GILHKDLKSKNVFYD--NGKVVITDFGLFSI  178 (319)
T ss_dssp             TCCCCCCCSTTEEEC----CCEECCCSCCC-
T ss_pred             CccccCCChhhEEEe--CCCEEEeecCCccc
Confidence            589999999999997  47899999998764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=91.90  E-value=0.14  Score=46.96  Aligned_cols=32  Identities=25%  Similarity=0.380  Sum_probs=26.0

Q ss_pred             eeeeecCCCCCCeeeeCCC---CeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETE---DKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~---~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||+++++.   ..+.|+||..+..
T Consensus       133 ~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A          133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            3589999999999997522   2799999998864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=91.88  E-value=0.11  Score=47.03  Aligned_cols=31  Identities=23%  Similarity=0.383  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeC------------------CCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDE------------------TEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~------------------~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.                  ..+.+.|+||..+..
T Consensus       143 ~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  191 (355)
T 2eu9_A          143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF  191 (355)
T ss_dssp             TEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEE
T ss_pred             CcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccc
Confidence            6899999999999931                  257899999998864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=91.85  E-value=0.12  Score=46.74  Aligned_cols=32  Identities=19%  Similarity=0.268  Sum_probs=25.9

Q ss_pred             eeeecCCCCCCeeeeCCC--CeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETE--DKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++.++  ..+.|+||..+..-
T Consensus       134 ~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  167 (322)
T 2ycf_A          134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  167 (322)
T ss_dssp             TEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred             CeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence            589999999999997532  24999999988653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=91.85  E-value=0.12  Score=49.82  Aligned_cols=30  Identities=23%  Similarity=0.417  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|+||..+..
T Consensus       309 ~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          309 NFVHRDLAARNVLVSE-DNVAKVSDFGLTKE  338 (450)
T ss_dssp             TEECSCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CeeCCCCCHhhEEECC-CCCEEEeeCCCccc
Confidence            5899999999999986 67899999998764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=91.84  E-value=0.14  Score=46.42  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCC---eEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETED---KVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~---~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++++..   .+.|+||..+..
T Consensus       135 ~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A          135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             CeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            5899999999999976322   699999998864

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=91.80  E-value=0.067  Score=48.48  Aligned_cols=34  Identities=15%  Similarity=0.359  Sum_probs=28.7

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      .+.+||+|++++.   .++.....+|+.||+||....
T Consensus       108 ~l~~~i~G~~~~~---~~~~~~~~~g~~La~lH~~~~  141 (346)
T 2q83_A          108 VVYDWIEGRPFEL---TVKQDLEFIMKGLADFHTASV  141 (346)
T ss_dssp             EEEECCCCBCCCT---TSHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeecCccCCC---CCHHHHHHHHHHHHHHHHhCC
Confidence            7899999999873   467788999999999998643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=91.80  E-value=0.12  Score=52.44  Aligned_cols=30  Identities=23%  Similarity=0.255  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       306 gIvHrDLKPeNILld~-~g~vKL~DFGla~~  335 (576)
T 2acx_A          306 RIVYRDLKPENILLDD-HGHIRISDLGLAVH  335 (576)
T ss_dssp             TEECCCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CEeccCCchheEEEeC-CCCeEEEeccccee
Confidence            5899999999999986 68899999998864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=91.80  E-value=0.11  Score=47.02  Aligned_cols=30  Identities=23%  Similarity=0.344  Sum_probs=24.7

Q ss_pred             eeeecCCCCCCeee----eCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIY----DETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~----~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++    ++ .+.+.|+||..|..
T Consensus       132 ~ivH~Dlkp~NIll~~~~~~-~~~~kL~Dfg~a~~  165 (319)
T 4euu_A          132 GIVHRNIKPGNIMRVIGEDG-QSVYKLTDFGAARE  165 (319)
T ss_dssp             TEECSCCSGGGEEEEECTTS-CEEEEECCCTTCEE
T ss_pred             CEecCCCCHHHEEEeccCCC-CceEEEccCCCcee
Confidence            58999999999997    33 45688999988854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=91.76  E-value=0.12  Score=51.86  Aligned_cols=30  Identities=23%  Similarity=0.263  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       309 gIvHrDLKP~NILl~~-~g~vkL~DFGla~~  338 (543)
T 3c4z_A          309 NIIYRDLKPENVLLDD-DGNVRISDLGLAVE  338 (543)
T ss_dssp             TEECCCCCGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCcccCCChHHEEEeC-CCCEEEeecceeee
Confidence            5899999999999986 68899999998864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=91.74  E-value=0.14  Score=47.52  Aligned_cols=31  Identities=13%  Similarity=0.097  Sum_probs=25.3

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.+  ...+.|+||..+..
T Consensus       150 ~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             TEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred             CceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence            58999999999999752  23499999988854

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=91.74  E-value=0.15  Score=48.01  Aligned_cols=31  Identities=26%  Similarity=0.327  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeeeCCCC---eEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETED---KVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~---~l~lIDfEya~~   75 (317)
                      .++|+||+|.||+++++..   .+.|+||..+..
T Consensus       135 givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A          135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            5899999999999975332   799999998864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=91.73  E-value=0.15  Score=47.38  Aligned_cols=31  Identities=26%  Similarity=0.463  Sum_probs=25.1

Q ss_pred             eeeecCCCCCCeeeeCCCC---eEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETED---KVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~---~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+.+.++   .+.|+||..|..
T Consensus       136 givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A          136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            5899999999999854322   499999998864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=91.73  E-value=0.12  Score=46.43  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=24.7

Q ss_pred             eeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.+.  ..+.|+||..+..
T Consensus       131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A          131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            589999999999997532  2399999988764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=91.72  E-value=0.1  Score=50.35  Aligned_cols=31  Identities=26%  Similarity=0.321  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||++.|||+++ ++.+.|+||..|...
T Consensus       304 ~ivHrDlkp~Nill~~-~~~~kl~DFG~a~~~  334 (454)
T 1qcf_A          304 NYIHRDLRAANILVSA-SLVCKIADFGLARVI  334 (454)
T ss_dssp             TCCCSSCSGGGEEECT-TCCEEECSTTGGGGB
T ss_pred             CccCCCCCHHHEEECC-CCcEEEeeCCCceEc
Confidence            4899999999999986 678999999988653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=91.72  E-value=0.062  Score=48.99  Aligned_cols=34  Identities=21%  Similarity=0.303  Sum_probs=28.5

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      ++.+|++|++++.   .++.....+++.||+||....
T Consensus       104 ~l~~~i~G~~~~~---~~~~~~~~~g~~La~lH~~~~  137 (328)
T 1zyl_A          104 AVFPSVGGRQFEA---DNIDQMEAVGRYLGRMHQTGR  137 (328)
T ss_dssp             EEEECCCCEECCS---SCHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEecCCCCCCC---CCHHHHHHHHHHHHHHHHhhc
Confidence            3899999998874   467788999999999998754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=91.69  E-value=0.11  Score=49.04  Aligned_cols=30  Identities=23%  Similarity=0.336  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++  ++.+.|+||..|...
T Consensus       175 ~ivHrDlkp~NIll~--~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          175 GIVHSDLKPANFLIV--DGMLKLIDFGIANQM  204 (390)
T ss_dssp             TCCCCCCCGGGEEES--SSCEEECCCSSSCCC
T ss_pred             CeeecCCCHHHEEEE--CCeEEEEecCccccc
Confidence            589999999999995  478999999998754

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=91.65  E-value=0.13  Score=48.33  Aligned_cols=31  Identities=26%  Similarity=0.336  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeee-CCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYD-ETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~-~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+. +..+.+.|+||..+..
T Consensus       207 ~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~  238 (373)
T 2x4f_A          207 YILHLDLKPENILCVNRDAKQIKIIDFGLARR  238 (373)
T ss_dssp             TEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred             CcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence            489999999999984 2357899999998874

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=91.64  E-value=0.082  Score=48.86  Aligned_cols=29  Identities=28%  Similarity=0.327  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       148 ~iiHRDlKp~NILl~~-~~~~Ki~DFGla~  176 (299)
T 4asz_A          148 HFVHRDLATRNCLVGE-NLLVKIGDFGMSR  176 (299)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCSCHH
T ss_pred             CcccCccCHhhEEECC-CCcEEECCcccce
Confidence            4799999999999986 5789999998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=91.60  E-value=0.16  Score=48.28  Aligned_cols=31  Identities=26%  Similarity=0.383  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCC-CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET-EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.+ .+.+.|+||..|..
T Consensus       169 givHrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          169 SIVHLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             CeeecccchHHeEEecCCCCceEEEeccccee
Confidence            58999999999999742 46799999998864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=91.56  E-value=0.17  Score=49.13  Aligned_cols=31  Identities=19%  Similarity=0.235  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeC--CCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDE--TEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.  +++.+.|+||..|..
T Consensus       130 givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A          130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            5899999999999974  246799999998853

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=91.52  E-value=0.078  Score=48.79  Aligned_cols=31  Identities=16%  Similarity=0.153  Sum_probs=25.1

Q ss_pred             eeeecCCCCCCeeeeC-----CCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDE-----TEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~-----~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.     ....+.|+||..+..
T Consensus       152 ~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~  187 (373)
T 1q8y_A          152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW  187 (373)
T ss_dssp             CEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEE
T ss_pred             CEEecCCChHHeEEeccCCCcCcceEEEcccccccc
Confidence            5999999999999953     123689999998864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=91.44  E-value=0.065  Score=51.48  Aligned_cols=30  Identities=23%  Similarity=0.393  Sum_probs=25.2

Q ss_pred             eeeecCCCCCCeeeeCCCCe--EEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDK--VTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~--l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.  +.|+||..|..
T Consensus       220 ~ivHrDlKp~NILl~~-~~~~~vkL~DFG~a~~  251 (429)
T 3kvw_A          220 RIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY  251 (429)
T ss_dssp             TEECSCCSGGGEEESS-TTSCCEEECCCTTCEE
T ss_pred             CeecCCCCHHHeEEcc-CCCcceEEeeccccee
Confidence            5899999999999986 344  99999988743

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=91.43  E-value=0.11  Score=47.90  Aligned_cols=31  Identities=32%  Similarity=0.486  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCC--eEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETED--KVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~--~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++ ++  .+.|+||..+...
T Consensus       179 ~ivH~Dikp~NIl~~~-~~~~~~kl~Dfg~a~~~  211 (352)
T 2jii_A          179 EYVHGNVTAENIFVDP-EDQSQVTLAGYGFAFRY  211 (352)
T ss_dssp             TCBCSCCCGGGEEEET-TEEEEEEECCGGGCBCS
T ss_pred             CccCCCCCHHHEEEcC-CCCceEEEecCcceeec
Confidence            6899999999999986 45  7999999998643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=91.34  E-value=0.099  Score=48.87  Aligned_cols=30  Identities=20%  Similarity=0.235  Sum_probs=24.1

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++.+  ...+.|+||..|.
T Consensus       201 ~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~  232 (367)
T 3l9p_A          201 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  232 (367)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             CeeCCCCChhhEEEecCCCCceEEECCCcccc
Confidence            58999999999999742  2358999997664

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=91.09  E-value=0.19  Score=43.81  Aligned_cols=31  Identities=16%  Similarity=0.111  Sum_probs=24.5

Q ss_pred             eeeecCCCCCCeeeeC------------------CCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDE------------------TEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~------------------~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.                  ....+.++||..+..
T Consensus       135 ~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~  183 (289)
T 1x8b_A          135 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR  183 (289)
T ss_dssp             TEECSCCSGGGEEEC--------------------CCCEEECCCTTCEE
T ss_pred             CEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccc
Confidence            5899999999999973                  134689999987764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=91.08  E-value=0.076  Score=46.84  Aligned_cols=32  Identities=25%  Similarity=0.334  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCC---CeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETE---DKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~---~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||+++++.   ..+.|+||..+..-
T Consensus       128 ~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A          128 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence            689999999999997532   27999999988643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=91.01  E-value=0.18  Score=46.36  Aligned_cols=31  Identities=19%  Similarity=0.452  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.+  .+.+.|+||..+..
T Consensus       148 ~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             CeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            59999999999999742  34599999998863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=90.96  E-value=0.12  Score=50.72  Aligned_cols=30  Identities=23%  Similarity=0.377  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||++.|||+++ ++.+.|+||..+..
T Consensus       338 ~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~  367 (495)
T 1opk_A          338 NFIHRNLAARNCLVGE-NHLVKVADFGLSRL  367 (495)
T ss_dssp             TEECSCCSGGGEEECG-GGCEEECCTTCEEC
T ss_pred             CcccCCCChhhEEECC-CCcEEEeeccccee
Confidence            5899999999999976 57899999998864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=90.95  E-value=0.15  Score=46.62  Aligned_cols=30  Identities=20%  Similarity=0.218  Sum_probs=24.1

Q ss_pred             eeeecCCCCCCeeeeC----CCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDE----TEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~----~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.|||++.    ..+.+.|+||..|.
T Consensus       152 ~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            5899999999999953    23459999998775

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=90.89  E-value=0.15  Score=48.06  Aligned_cols=30  Identities=23%  Similarity=0.344  Sum_probs=24.8

Q ss_pred             eeeecCCCCCCeee----eCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIY----DETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~----~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||++    ++ .+.+.|+||..|..
T Consensus       132 ~ivH~Dlkp~NIll~~~~~~-~~~~kL~DFG~a~~  165 (396)
T 4eut_A          132 GIVHRNIKPGNIMRVIGEDG-QSVYKLTDFGAARE  165 (396)
T ss_dssp             TEECCCCCGGGEEEEECTTS-CEEEEECCGGGCEE
T ss_pred             CEEECCcCHHHEEEeecCCC-ceeEEEecCCCceE
Confidence            48999999999998    33 45688999998864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=90.85  E-value=0.17  Score=45.51  Aligned_cols=30  Identities=23%  Similarity=0.336  Sum_probs=25.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.||++++  +.+.|+||..+...
T Consensus       147 ~ivH~dlkp~NIl~~~--~~~kL~Dfg~~~~~  176 (313)
T 3cek_A          147 GIVHSDLKPANFLIVD--GMLKLIDFGIANQM  176 (313)
T ss_dssp             TCCCCCCCGGGEEEET--TEEEECCCSSSCC-
T ss_pred             CceecCCCcccEEEEC--CeEEEeeccccccc
Confidence            5899999999999964  78999999998753

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=90.80  E-value=0.16  Score=47.41  Aligned_cols=31  Identities=19%  Similarity=0.245  Sum_probs=25.6

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.+  .+.+.|+||..+..
T Consensus       148 ~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            58999999999999753  24599999998864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=90.70  E-value=0.18  Score=46.67  Aligned_cols=31  Identities=19%  Similarity=0.435  Sum_probs=23.3

Q ss_pred             eeeecCCCCCCeeeeC--CCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDE--TEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.  .++.+.|+||..+..
T Consensus       168 ~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~  200 (349)
T 2w4o_A          168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI  200 (349)
T ss_dssp             TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred             CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence            5899999999999963  257899999988764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=90.70  E-value=0.12  Score=49.88  Aligned_cols=30  Identities=27%  Similarity=0.390  Sum_probs=25.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||++.|||+++ ++.+.|+||..+..
T Consensus       300 ~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          300 NYVHRDLRAANILVGE-NLVCKVADFGLARL  329 (452)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCCTTC-
T ss_pred             CeeCCCCChhhEEECC-CCCEEECCCcccee
Confidence            4899999999999976 57899999998864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=90.69  E-value=0.18  Score=43.80  Aligned_cols=31  Identities=10%  Similarity=0.004  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.||++++ ++.+.+.|++++..
T Consensus       132 ~~i~H~dikp~Nil~~~-~~~~~l~~~~~~~~  162 (271)
T 3kmu_A          132 PLIPRHALNSRSVMIDE-DMTARISMADVKFS  162 (271)
T ss_dssp             SCCTTCCCSGGGEEECT-TSCEEEEGGGSCCT
T ss_pred             CceecCCCccceEEEcC-CcceeEEeccceee
Confidence            35899999999999986 57788988887653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=90.41  E-value=0.13  Score=50.99  Aligned_cols=31  Identities=26%  Similarity=0.348  Sum_probs=26.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||++.|||+++ ++.+.|+||..+...
T Consensus       383 ~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          383 NYVHRDLRAANILVGE-NLVCKVADFGLARLI  413 (535)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCTTSTTTC
T ss_pred             CeeCCCCCHhhEEEcC-CCcEEEcccccceec
Confidence            4899999999999976 578999999988753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=90.35  E-value=0.066  Score=50.78  Aligned_cols=30  Identities=30%  Similarity=0.393  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||++.|||+++ ++.+.|.||-.|..
T Consensus       205 ~iiHRDLK~~NILl~~-~~~vKi~DFGlar~  234 (353)
T 4ase_A          205 KCIHRDLAARNILLSE-KNVVKICDFGLARD  234 (353)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCGGGSC
T ss_pred             CeecCccCccceeeCC-CCCEEECcchhhhh
Confidence            3689999999999986 57899999988863

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=90.22  E-value=0.19  Score=51.13  Aligned_cols=29  Identities=28%  Similarity=0.346  Sum_probs=25.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||+++  +.++|+||..+..
T Consensus       202 giiHrDlkp~NIll~~--~~~kl~DFG~a~~  230 (681)
T 2pzi_A          202 GLVYNDLKPENIMLTE--EQLKLIDLGAVSR  230 (681)
T ss_dssp             TEECCCCSGGGEEECS--SCEEECCCTTCEE
T ss_pred             CCeecccChHHeEEeC--CcEEEEecccchh
Confidence            4999999999999975  5899999987753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=90.20  E-value=0.13  Score=46.67  Aligned_cols=34  Identities=15%  Similarity=0.280  Sum_probs=28.8

Q ss_pred             eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745         208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS  244 (317)
Q Consensus       208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~  244 (317)
                      ++.+||+|++++..   ++.....+++.||++|....
T Consensus       100 ~l~~~l~G~~~~~~---~~~~~~~~g~~La~lH~~~~  133 (322)
T 2ppq_A          100 ALISFLEGMWLRKP---EAKHCREVGKALAAMHLASE  133 (322)
T ss_dssp             EEEECCCCBCCSSC---CHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCcCCCCC---CHHHHHHHHHHHHHHHHHhc
Confidence            78999999998653   57889999999999998643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=90.11  E-value=0.18  Score=48.74  Aligned_cols=30  Identities=20%  Similarity=0.463  Sum_probs=25.0

Q ss_pred             eeeecCCCCCCeeeeC--CCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDE--TEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++.  ..+.+.|+||..|.
T Consensus       146 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          146 KIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            5899999999999952  25789999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=90.04  E-value=0.14  Score=51.98  Aligned_cols=29  Identities=21%  Similarity=0.363  Sum_probs=25.7

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||++.|||+++ ++.+.|+||..|.
T Consensus       489 ~iiHrDLkp~NILl~~-~~~~kL~DFGla~  517 (635)
T 4fl3_A          489 NFVHRDLAARNVLLVT-QHYAKISDFGLSK  517 (635)
T ss_dssp             TCCCSCCSGGGEEEEE-TTEEEECCTTHHH
T ss_pred             CEeCCCCChHhEEEeC-CCCEEEEEcCCcc
Confidence            5899999999999986 6789999998765

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=89.88  E-value=0.23  Score=44.01  Aligned_cols=31  Identities=23%  Similarity=0.425  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.||+++.+  ...+.|+||..+..
T Consensus       141 ~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~  173 (287)
T 2wei_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (287)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred             CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence            58999999999999653  23699999988764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=89.71  E-value=0.2  Score=45.49  Aligned_cols=30  Identities=20%  Similarity=0.235  Sum_probs=24.5

Q ss_pred             eeeecCCCCCCeeeeC--CCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDE--TEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.||+++.  ....+.|+||..+.
T Consensus       160 ~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~  191 (327)
T 2yfx_A          160 HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR  191 (327)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECCCHHHH
T ss_pred             CeecCcCCHhHEEEecCCCcceEEECcccccc
Confidence            5899999999999973  23469999998764

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=89.68  E-value=0.25  Score=47.84  Aligned_cols=30  Identities=23%  Similarity=0.439  Sum_probs=24.9

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||++..  .+.+.|+||..|.
T Consensus       141 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            48999999999999642  3579999999775

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=89.66  E-value=0.22  Score=50.35  Aligned_cols=31  Identities=16%  Similarity=0.279  Sum_probs=27.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||++.|||+++ ++.+.|+||..|...
T Consensus       456 ~iiHrDlkp~NILl~~-~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          456 NFVHRNLAARNVLLVN-RHYAKISDFGLSKAL  486 (613)
T ss_dssp             TCCCSCCSGGGEEEEE-TTEEEECCCSTTTTC
T ss_pred             CEEcCcCCHHHEEEcC-CCcEEEeeccCcccc
Confidence            5899999999999986 688999999988753

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=89.56  E-value=0.22  Score=44.52  Aligned_cols=33  Identities=24%  Similarity=0.420  Sum_probs=26.8

Q ss_pred             eeeecCCCCCCeeee--CCCCeEEEEeeccccCCc
Q psy8745          45 VFCHNDLLLGNIIYD--ETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        45 v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~~n~   77 (317)
                      .++|+|++|.||++.  +..+.+.|+||..+....
T Consensus       126 ~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A          126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            589999999999983  225789999999887543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=89.26  E-value=0.19  Score=46.60  Aligned_cols=29  Identities=21%  Similarity=0.230  Sum_probs=25.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||++.|||+++ ++.+.|.||-.|.
T Consensus       165 ~iiHRDLK~~NILl~~-~~~~Ki~DFGlar  193 (308)
T 4gt4_A          165 HVVHKDLATRNVLVYD-KLNVKISDLGLFR  193 (308)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCSCCBC
T ss_pred             CCCCCCccccceEECC-CCCEEECCcccce
Confidence            3689999999999986 6789999998875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=89.03  E-value=0.26  Score=46.99  Aligned_cols=32  Identities=16%  Similarity=0.259  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.|||++..  ...+.|+||..|..-
T Consensus       259 ~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL  292 (419)
T ss_dssp             TCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred             CccccCCChHhEEEecCCCcceEEEeecccceec
Confidence            48999999999999642  235999999988754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=88.47  E-value=0.34  Score=47.04  Aligned_cols=30  Identities=17%  Similarity=0.437  Sum_probs=24.6

Q ss_pred             eeeecCCCCCCeeeeCC--CCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDET--EDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~   74 (317)
                      .++|+|++|.|||++..  .+.+.|+||..|.
T Consensus       156 ~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            58999999999999652  3459999998774

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=88.44  E-value=0.35  Score=46.29  Aligned_cols=32  Identities=19%  Similarity=0.246  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCC------------CCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDET------------EDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~------------~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++..            ...+.|+||..|...
T Consensus       135 ~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~  178 (434)
T 2rio_A          135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL  178 (434)
T ss_dssp             TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEEC
T ss_pred             CccccCCChHhEEEecCcccccccccCCCceEEEEcccccceec
Confidence            58999999999999742            247999999988643

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=88.44  E-value=0.38  Score=46.83  Aligned_cols=31  Identities=16%  Similarity=0.450  Sum_probs=25.3

Q ss_pred             eeeecCCCCCCeeeeCCCC--eEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETED--KVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~--~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++.++.  .+.|+||..|..
T Consensus       166 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  198 (504)
T 3q5i_A          166 NIVHRDIKPENILLENKNSLLNIKIVDFGLSSF  198 (504)
T ss_dssp             TEECSCCSGGGEEESSTTCCSSEEECCCTTCEE
T ss_pred             CeEeCCCcHHHEEEecCCCCccEEEEECCCCEE
Confidence            5899999999999975322  699999988753

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=88.23  E-value=0.3  Score=49.78  Aligned_cols=31  Identities=23%  Similarity=0.370  Sum_probs=27.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.|||++. ++.+.|+||..+...
T Consensus       511 givHrDikp~NILl~~-~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          511 RFVHRDIAARNVLVSS-NDCVKLGDFGLSRYM  541 (656)
T ss_dssp             TCCCSCCSGGGEEEEE-TTEEEECCCCCCCSC
T ss_pred             CccccccchHhEEEeC-CCCEEEEecCCCeec
Confidence            5899999999999986 688999999988753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=87.00  E-value=0.23  Score=50.01  Aligned_cols=32  Identities=22%  Similarity=0.441  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCC-CCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDET-EDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++.+ .+.|.|+||-.|..
T Consensus       274 ~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~  306 (573)
T 3uto_A          274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  306 (573)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred             CCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence            358999999999999753 37899999998865

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=85.34  E-value=0.63  Score=44.69  Aligned_cols=32  Identities=22%  Similarity=0.197  Sum_probs=24.8

Q ss_pred             eeeecCCCCCCeeeeCC--C--CeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDET--E--DKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~--~--~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.||+++..  .  ..+.|+||..|..-
T Consensus       138 ~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            48999999999999531  1  25779999988643

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=85.25  E-value=0.8  Score=47.32  Aligned_cols=31  Identities=29%  Similarity=0.328  Sum_probs=25.0

Q ss_pred             eeeecCCCCCCeeeeCCCC--eEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETED--KVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~--~l~lIDfEya~~   75 (317)
                      .++|+|++|+||+++.+++  .+.|+||..+..
T Consensus       141 gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A          141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             TBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             CCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence            5899999999999986322  378999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	317
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	7e-42
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	3e-08
d2pula1	392	d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {	1e-06
d1nd4a_	255	d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferas	0.001

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  147 bits (371), Expect = 7e-42
 Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 37/194 (19%)

Query: 25  QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET----------------------- 61
            L  + +++   +S +KSPV FCHNDL  GNI+  +                        
Sbjct: 199 DLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSA 258

Query: 62  ----EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS--------PIDHSRYPGPEFQLSW 109
               + ++  ID+EYA  NY+AFD ANHF E+             I    +P  +  L +
Sbjct: 259 FNPADPRLVLIDFEYASYNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEF 318

Query: 110 LRTYLEEYTGSPPSP--HQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYAS 167
              YL E   +  +    +   L  +   F PV+H FW +WGL+Q E S + F F  Y  
Sbjct: 319 FLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFFWGVWGLLQVELSPVGFGFADYGR 378

Query: 168 STYQGYVLKRDKYL 181
                Y   +    
Sbjct: 379 DRLSLYFKHKQLLK 392

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 52.1 bits (124), Expect = 3e-08
 Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 189 QILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-- 246
            +L    L P+LY  F  G + +Y+    ++   I   H+   +A+ +A++H++   +  
Sbjct: 99  TLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWK 158

Query: 247 KTPKLWSTGKHMLSLIPRTYSNPDKQERY 275
           +   L    +  L  +  T     + +  
Sbjct: 159 EPDYLCEALQRWLKQLTGTVDAEHRFDLP 187

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 8/109 (7%)

Query: 13  SRFQALFPGGVSQLQSDWQYIETAL----SKTKSPVVFCHNDLLLGNIIYDETEDKVTFI 68
           + F+      V +L ++      A     S   S     H DL  G+I   E   +   I
Sbjct: 188 NDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASE--HETKVI 245

Query: 69  DYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY 117
           D E+A      FD+                     E     +    E +
Sbjct: 246 DPEFAFYGPIGFDVGQFIANL--FLNALSRDGADREPLYEHVNQVWETF 292

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 13/86 (15%)

Query: 43  PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPG 102
            +V  H D  L NI+ +       FID    GV  +  DIA    + A            
Sbjct: 174 DLVVTHGDACLPNIMVENGRFSG-FIDCGRLGVADRYQDIALATRDIAE----------- 221

Query: 103 PEFQLSWLRTYLEEYTGSPPSPHQLA 128
            E    W   +L  Y  + P   ++A
Sbjct: 222 -ELGGEWADRFLVLYGIAAPDSQRIA 246

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	317
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	100.0
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	99.28
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	99.17
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	99.02
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.97
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.94
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.8
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	96.72
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.35
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	95.16
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	94.95
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	94.9
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	94.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	94.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	94.82
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	94.7
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	94.48
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.46
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	94.44
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	94.43
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	94.35
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	94.24
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	94.23
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	94.23
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	94.18
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	94.14
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	94.11
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	94.03
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	93.91
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	93.84
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	93.75
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	93.73
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	93.68
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	93.66
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	93.62
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	93.61
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	93.6
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	93.39
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	93.36
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	93.28
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	93.28
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	92.79
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	92.56
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	92.55
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	92.53
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	92.41
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	92.23
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	91.74
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	91.69
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	91.37
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	91.31
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	91.24
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	91.21
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	91.2
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	91.1
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	91.06
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	90.91
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	90.19
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	89.94
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	89.93
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	89.92
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	89.79
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	89.73
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	89.65
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	89.56
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	89.35
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	89.26
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	89.09
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	88.75
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	88.67
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	86.99
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	84.57

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.3e-38  Score=304.82  Aligned_cols=162  Identities=33%  Similarity=0.612  Sum_probs=144.1

Q ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeC---------------------------CCCeEEEEeecccc
Q psy8745          22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDE---------------------------TEDKVTFIDYEYAG   74 (317)
Q Consensus        22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~---------------------------~~~~l~lIDfEya~   74 (317)
                      ....+.++++||++.+...+.++||||||++++|||+.+                           ++++|+|||||||+
T Consensus       196 ~~~~l~~~~~~L~~~l~~~~~~lv~CHnDL~~~NiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~  275 (395)
T d1nw1a_         196 NCLDLARELEFLRAHISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  275 (395)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCCCEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             cHHHHHHHHHHHHHHhhcccCCeeEEecCCCcccEeeccccccccccccccccccccccccccccCCCCcEEEEeecccC
Confidence            467899999999999999999999999999999999843                           24679999999999


Q ss_pred             CCchhhhHHHHHHHhhCCC--------CCCCCCCCCHHHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhhhhhhhhhHHH
Q psy8745          75 VNYQAFDIANHFDEFAGVS--------PIDHSRYPGPEFQLSWLRTYLEEYTGSPP--SPHQLATLHWQVQQFSPVAHCF  144 (317)
Q Consensus        75 ~n~~~fDiAn~~~E~~~~~--------~~d~~~yp~~e~~~~fi~~YL~~y~~~~~--s~~ev~~l~~~v~~~~l~shl~  144 (317)
                      +|+|+||||||||||++.+        .++++.||+.++|+.|++.|++.+.+...  ...+++.|+.+|+.|.+++|++
T Consensus       276 ~n~~~fDian~f~E~~~~y~~~~~~~~~~~~~~~ps~e~~~~fi~~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~~~s~l~  355 (395)
T d1nw1a_         276 YNYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQGNTRENELYKKSEDLVQETLPFVPVSHFF  355 (395)
T ss_dssp             EEEHHHHHHHHHHHTTEECCCSSTTSCEECGGGSCCHHHHHHHHHHHHHHHTCSCGGGHHHHHHHHHHHHGGGHHHHHHH
T ss_pred             CCcchhhHHHHHHHHhcccCCccccccccccccCcCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHhHHH
Confidence            9999999999999999843        24677899999999999999998864332  3467899999999999999999


Q ss_pred             HHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcCC
Q psy8745         145 WTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGT  183 (317)
Q Consensus       145 W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~~  183 (317)
                      |++||++|+..|.++|||++||..|+++|++.|+.+.++
T Consensus       356 W~lW~~iq~~~~~~~fDy~~Y~~~Rl~~y~~~k~~l~~~  394 (395)
T d1nw1a_         356 WGVWGLLQVELSPVGFGFADYGRDRLSLYFKHKQLLKNL  394 (395)
T ss_dssp             HHHHHHHHHHHCCSSSCHHHHHHHHHHHHHHTHHHHHTT
T ss_pred             HHHHHHHhhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999665

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.28  E-value=7.3e-13  Score=125.61  Aligned_cols=80  Identities=20%  Similarity=0.360  Sum_probs=72.8

Q ss_pred             CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC--CCCcchHHHHHHHhhcc
Q psy8745         186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM--KTPKLWSTGKHMLSLIP  263 (317)
Q Consensus       186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~--~~p~lw~~i~kwl~~~~  263 (317)
                      .+++.|+++|+||++||+|+||+|++|++|++|+++++.+|.+++.||++||++|.+.++.  ..|.+|..+++|++.++
T Consensus        96 ~i~~~ls~~gl~Pkll~~~~~g~I~efi~g~~l~~~d~~~~~~~~~iA~~La~lH~~~~~~~~~~~~~~~~i~~~l~~~~  175 (395)
T d1nw1a_          96 VIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLSCHEISLAHMSTKIAKRVAKVHQLEVPIWKEPDYLCEALQRWLKQLT  175 (395)
T ss_dssp             HHHHHHHHTTSSSCEEEEETTEEEECCCCEEECCTTGGGSHHHHHHHHHHHHHHTTCCCSSCCSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCeEEEEcCCceEEEEeccccCChhhccchhhhHHHHHHHHHHhhcccccccCcchHHHHHHHHHHhhh
Confidence            4567899999999999999999999999999999999999999999999999999998764  44569999999998876


Q ss_pred             cc
Q psy8745         264 RT  265 (317)
Q Consensus       264 ~~  265 (317)
                      ..
T Consensus       176 ~~  177 (395)
T d1nw1a_         176 GT  177 (395)
T ss_dssp             HH
T ss_pred             hh
Confidence            54

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.17  E-value=1.4e-10  Score=105.43  Aligned_cols=107  Identities=16%  Similarity=0.211  Sum_probs=76.8

Q ss_pred             cCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Q psy8745          39 KTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT  118 (317)
Q Consensus        39 ~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~  118 (317)
                      ..+.|..+||||++++|+++++ ++.+.+||||+|+++++.+|||..++.||...+    .-...+....|++.|-+.  
T Consensus       178 ~~~L~~giIHgDl~~dNvl~~~-~~v~gvIDF~~~~~~~~~~DLAi~~~~~~~~~~----~~~~~~~~~afl~GY~~~--  250 (316)
T d2ppqa1         178 PKDLPAGVIHADLFQDNVFFLG-DELSGLIDFYFACNDLLAYDVSICLNAWCFEKD----GAYNVTKGKALLEGYQSV--  250 (316)
T ss_dssp             CCSSCEEEECSCCCGGGEEEET-TEEEEECCCTTCEEEEHHHHHHHHHHHHSBCTT----SCBCHHHHHHHHHHHHTT--
T ss_pred             ccccccccccCCcchhhhhccc-ccceeEecccccccchhhhhHHHHHHHHhhcch----hhhHHHHHHHHHHHHHhc--
Confidence            4568999999999999999985 333479999999999999999999998875221    112345556788888876  


Q ss_pred             CCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745         119 GSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE  154 (317)
Q Consensus       119 ~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~  154 (317)
                       ++++++|++.|..-++ .+.+.=+++.++..+...
T Consensus       251 -rpLs~~E~~~l~~~~~-~aalrf~lsrl~~~~~~~  284 (316)
T d2ppqa1         251 -RPLSEAELEALPLLSR-GSALRFFLTRLYDWLTTP  284 (316)
T ss_dssp             -SCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHSC
T ss_pred             -CCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCC
Confidence             6899999998875443 222222444556555443

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=99.02  E-value=7.8e-11  Score=111.75  Aligned_cols=61  Identities=21%  Similarity=0.311  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh
Q psy8745          26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA   90 (317)
Q Consensus        26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~   90 (317)
                      +..++.++...+..  .+.++||||++++|||+++  +++.|||||+|++|+|+||||+++.++.
T Consensus       207 l~~~~~~l~~~~~~--~~~~LiHGDl~~gNIlv~~--~~~~vID~E~a~~G~~~~Dlg~~~~~~~  267 (392)
T d2pula1         207 VKIEAAKLKKSFLT--SAETLIHGDLHTGSIFASE--HETKVIDPEFAFYGPIGFDVGQFIANLF  267 (392)
T ss_dssp             HHHHHHHHHHHHHH--BCCEEECSCCCGGGEEECS--SCEEECCCTTCEEECTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhccc--CCcceeccCCcCCceeEcC--CceEEechhhcccCCHHHHHHHHHHHHH
Confidence            34444444444332  4679999999999999975  5699999999999999999999988753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.97  E-value=6.1e-10  Score=97.20  Aligned_cols=48  Identities=29%  Similarity=0.306  Sum_probs=40.8

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF   89 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~   89 (317)
                      ..+.++||||++++|||+++ ++.+.|||||++++++|.+|||.++...
T Consensus       172 ~~~~~liHgD~~~~Nvl~~~-~~~~~iID~~~~~~g~~~~Dla~~~~~~  219 (255)
T d1nd4a_         172 GEDLVVTHGDACLPNIMVEN-GRFSGFIDCGRLGVADRYQDIALATRDI  219 (255)
T ss_dssp             SCCEEEECSSCCGGGEEEET-TEEEEECCCTTCEEEETHHHHHHHHHHH
T ss_pred             cCCceEEeCCCCCcceEEeC-CceEEEEEchhcccCCHHHHHHHHHHHh
Confidence            45789999999999999975 3335699999999999999999877653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.94  E-value=2.7e-10  Score=99.94  Aligned_cols=46  Identities=35%  Similarity=0.452  Sum_probs=39.9

Q ss_pred             CCCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHH
Q psy8745          41 KSPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDE   88 (317)
Q Consensus        41 ~~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E   88 (317)
                      ..+.|+||+|++++|||+++  +++ .|||||+|++++|.+|||..+..
T Consensus       180 ~~~~~l~HgD~~~~Nil~~~--~~~~~lIDwe~a~~g~~~~Dla~~~~~  226 (263)
T d1j7la_         180 EEELVFSHGDLGDSNIFVKD--GKVSGFIDLGRSGRADKWYDIAFCVRS  226 (263)
T ss_dssp             CCCEEEECSCCCTTSEEEET--TEEEEECCCTTCEEEEHHHHHHHHHHH
T ss_pred             cCCcEEEEeeccCcceeecC--CceEEEeechhcccCCHHHHHHHHHHH
Confidence            35689999999999999985  555 59999999999999999987654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.80  E-value=2.7e-09  Score=98.08  Aligned_cols=106  Identities=18%  Similarity=0.203  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHh---cCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCC
Q psy8745          23 VSQLQSDWQYIETALS---KTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSR   99 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~---~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~   99 (317)
                      ...+.+.++.+.+.+.   ....+.++||+|++++|||+++  + ..+||||.|+++++.+||+.++.-           
T Consensus       168 ~~~~~~~~~~l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~--~-~~~IDFdd~~~g~~~~DLa~~l~~-----------  233 (325)
T d1zyla1         168 KAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRD--G-PMFVDLDDARNGPAVQDLWMLLNG-----------  233 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEESS--S-EEECCCTTCCEECTTHHHHTTCCS-----------
T ss_pred             HHHHHHHHHHHHHHHHHhccccCCceeecCCCCcccEEEeC--C-ceEEechhcccCcHHHHHHHhccc-----------
Confidence            3444455555544443   2456889999999999999953  3 568999999999999999864321           


Q ss_pred             CCCHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHhhhhhhhhhHHHH
Q psy8745         100 YPGPEFQLSWLRTYLEEYT-GSPPSPHQLATLHWQVQQFSPVAHCFW  145 (317)
Q Consensus       100 yp~~e~~~~fi~~YL~~y~-~~~~s~~ev~~l~~~v~~~~l~shl~W  145 (317)
                        ..+.+...+...++.|. -++++++|+..+. ......++.+..|
T Consensus       234 --~~~~~~~~~~~~l~GY~~~~~l~~~el~~i~-~l~~lR~~~~~~W  277 (325)
T d1zyla1         234 --DKAEQRMQLETIIEAYEEFSEFDTAEIGLIE-PLRAMRLVYYLAW  277 (325)
T ss_dssp             --SHHHHHHHHHHHHHHHTTTSCCCGGGGGGHH-HHHHHHHHHHHHH
T ss_pred             --cccCHHHHHHHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHH
Confidence              12333334555666664 2567877755332 2223334444444

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.72  E-value=0.00091  Score=55.20  Aligned_cols=45  Identities=16%  Similarity=0.143  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYA   73 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya   73 (317)
                      ...+..++......+..    ..++|+|++|+|||+++  +.+++|||..|
T Consensus       105 ~~~i~~ql~~~l~~lH~----~giiHrDiKP~NILv~~--~~~~liDFG~a  149 (191)
T d1zara2         105 PDEVLDMILEEVAKFYH----RGIVHGDLSQYNVLVSE--EGIWIIDFPQS  149 (191)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTEECSCCSTTSEEEET--TEEEECCCTTC
T ss_pred             HHHHHHHHHHHHHHHhh----CCEEEccCChhheeeeC--CCEEEEECCCc
Confidence            33444444333334444    35999999999999984  67999999865

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.35  E-value=0.0013  Score=55.86  Aligned_cols=57  Identities=18%  Similarity=0.290  Sum_probs=48.8

Q ss_pred             hhhhhcCC-CCceEEEecCc----eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC
Q psy8745         189 QILHRAGL-APRLYAEFDNG----LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN  245 (317)
Q Consensus       189 ~~L~~~~~-gp~l~g~F~nG----~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~  245 (317)
                      ..|+..|+ .|++|+...++    ++.+||+|+++...++..+.+...+++.|+++|.+.++
T Consensus        59 ~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~  120 (255)
T d1nd4a_          59 SWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPA  120 (255)
T ss_dssp             HHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGG
T ss_pred             HHHHhcCCCCCceeeecccccceEEEEEeeeccccccccccHHHHHHHHHHHHHHHccCChh
Confidence            45677777 79999887665    69999999999999998888999999999999998754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0029  Score=56.68  Aligned_cols=29  Identities=21%  Similarity=0.466  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.|||+++ ++.+.|+||-.|.
T Consensus       125 ~IiHRDiKP~NILl~~-~~~vkl~DFGla~  153 (322)
T d1s9ja_         125 KIMHRDVKPSNILVNS-RGEIKLCDFGVSG  153 (322)
T ss_dssp             CCCCSCCSGGGEEECT-TCCEEECCCCCCH
T ss_pred             CEEccccCHHHeeECC-CCCEEEeeCCCcc
Confidence            5899999999999986 6889999998776

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.95  E-value=0.0045  Score=53.96  Aligned_cols=32  Identities=22%  Similarity=0.355  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||++.+.+.+.++||-.|..
T Consensus       129 ~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_         129 CGVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CCCccccCcccceEEecCCCeEEECcccccee
Confidence            35899999999999986567899999988764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.90  E-value=0.0086  Score=54.36  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=26.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ++.+.|+||-.|..
T Consensus       160 ~~iiHRDIKP~NILl~~-~g~ikL~DFG~a~~  190 (350)
T d1rdqe_         160 LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKR  190 (350)
T ss_dssp             TTEECCCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CCEecCcCCHHHcccCC-CCCEEeeeceeeee
Confidence            35999999999999986 68899999988764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.90  E-value=0.0093  Score=52.16  Aligned_cols=30  Identities=30%  Similarity=0.492  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||+++ ++.+.|+||-.|..
T Consensus       123 ~IiHrDiKp~NILl~~-~~~~KL~DFG~a~~  152 (271)
T d1nvra_         123 GITHRDIKPENLLLDE-RDNLKISDFGLATV  152 (271)
T ss_dssp             TEECSCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCccCcccHHHEEECC-CCCEEEccchhhee
Confidence            5899999999999986 57899999998864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.0092  Score=52.85  Aligned_cols=30  Identities=20%  Similarity=0.416  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..
T Consensus       136 ~iiHrDiKp~NILl~~-~~~vkl~DFG~a~~  165 (293)
T d1yhwa1         136 QVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ  165 (293)
T ss_dssp             TEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCcccCCcHHHeEECC-CCcEeeccchhhee
Confidence            5899999999999986 68899999998864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.82  E-value=0.01  Score=52.99  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.+.|+||-.|..
T Consensus       123 ~~iiHrDiKp~NILl~~-~g~vkL~DFG~a~~  153 (316)
T d1fota_         123 KDIIYRDLKPENILLDK-NGHIKITDFGFAKY  153 (316)
T ss_dssp             TTEECCCCCGGGEEECT-TSCEEECCCSSCEE
T ss_pred             CcEEccccCchheeEcC-CCCEEEecCccceE
Confidence            35899999999999986 68899999988764

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0042  Score=54.42  Aligned_cols=31  Identities=26%  Similarity=0.261  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++..+.+.|+||-.|..
T Consensus       134 ~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_         134 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             CCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             CEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            4799999999999975467899999988864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.0092  Score=52.02  Aligned_cols=32  Identities=25%  Similarity=0.369  Sum_probs=20.8

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ...++|+|++|.|||+++ ++.+.|+||-.|..
T Consensus       132 ~~~IiHrDiKp~NIll~~-~~~vkl~DFG~a~~  163 (269)
T d2java1         132 GHTVLHRDLKPANVFLDG-KQNVKLGDFGLARI  163 (269)
T ss_dssp             --------CCGGGEEECT-TSCEEECCHHHHHH
T ss_pred             CCCEEeCcCchhhcCcCC-CCcEEEeeccceee
Confidence            345899999999999986 68899999987754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.46  E-value=0.026  Score=47.47  Aligned_cols=57  Identities=18%  Similarity=0.160  Sum_probs=43.3

Q ss_pred             hhhhhcCCCCceEEEecCc----eEEEeecCccCCC---CCCCCcccHHHHHHHHHhhcccCCC
Q psy8745         189 QILHRAGLAPRLYAEFDNG----LVYQYVRGVTITP---DSIREPHIHPLVARNMARLHKVHSN  245 (317)
Q Consensus       189 ~~L~~~~~gp~l~g~F~nG----~~e~fi~g~tL~~---~~l~~~~i~~~IA~~la~~H~~~~~  245 (317)
                      ..|++....|++++.+.++    +|.++++|+++..   .+.....+.+.+|+.|+++|++.++
T Consensus        64 ~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~  127 (263)
T d1j7la_          64 LWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDIS  127 (263)
T ss_dssp             HHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCCT
T ss_pred             HHHhccCCCCcEEEEEecCCceEEEEEecccccccccccccccHHHHHHHHHHHHHHHhccCcc
Confidence            4466666689999987654    7999999998843   3333456788899999999998764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=94.44  E-value=0.015  Score=51.39  Aligned_cols=33  Identities=24%  Similarity=0.388  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.|||++.+++.+.++||-.|..-
T Consensus       148 ~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         148 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             cccccccccccceEEcCCCCeeeecccccceec
Confidence            358999999999999865567899999887643

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.0057  Score=53.69  Aligned_cols=29  Identities=28%  Similarity=0.441  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|.|||+++ .+.+.|+||..|.
T Consensus       120 ~iiHrDiKp~NIli~~-~~~~KL~DFG~a~  148 (299)
T d1ua2a_         120 WILHRDLKPNNLLLDE-NGVLKLADFGLAK  148 (299)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECCCGGGS
T ss_pred             ceecccCCcceEEecC-CCccccccCcccc
Confidence            4799999999999986 6889999998875

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.35  E-value=0.0057  Score=53.29  Aligned_cols=30  Identities=13%  Similarity=0.308  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||+++ ++.+.|+||..|..
T Consensus       126 ~ivHrDiKp~Nill~~-~~~~kl~DFG~a~~  155 (263)
T d2j4za1         126 RVIHRDIKPENLLLGS-AGELKIADFGWSVH  155 (263)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEECCCCSCSC
T ss_pred             CeeeeeeccccceecC-CCCEeecccceeee
Confidence            5899999999999986 67899999998864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.016  Score=51.02  Aligned_cols=33  Identities=24%  Similarity=0.489  Sum_probs=27.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ   78 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~   78 (317)
                      .++|+|++|.|||++. ++.+.|+||-.|.....
T Consensus       130 ~ivHrDiKp~NIll~~-~~~~Kl~DFG~a~~~~~  162 (288)
T d2jfla1         130 KIIHRDLKAGNILFTL-DGDIKLADFGVSAKNTR  162 (288)
T ss_dssp             TEECCCCSGGGEEECT-TSCEEECCCTTCEECHH
T ss_pred             CEEEeecChhheeECC-CCCEEEEechhhhccCC
Confidence            5899999999999986 67899999998865433

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.013  Score=52.77  Aligned_cols=32  Identities=22%  Similarity=0.406  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++.+...+.|+||-.|..
T Consensus       141 ~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_         141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             TTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             cCCcccCCCcceEEEecCCCceeEecccchhh
Confidence            46899999999999986445788999987653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.0072  Score=53.38  Aligned_cols=31  Identities=29%  Similarity=0.396  Sum_probs=27.1

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||+++ ++.+.++||..|..
T Consensus       127 ~~iiHrDiKp~NIll~~-~~~vkl~DFG~a~~  157 (288)
T d1uu3a_         127 KGIIHRDLKPENILLNE-DMHIQITDFGTAKV  157 (288)
T ss_dssp             TTEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             ccEEcCcCCccccccCC-CceEEeccccccee
Confidence            35899999999999986 67899999998864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.012  Score=51.50  Aligned_cols=29  Identities=24%  Similarity=0.405  Sum_probs=25.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+|++|+|||++. ++.+.++||-.|.
T Consensus       122 ~IiHrDiKpeNIl~~~-~~~~kl~DFG~a~  150 (298)
T d1gz8a_         122 RVLHRDLKPQNLLINT-EGAIKLADFGLAR  150 (298)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECSTTHHH
T ss_pred             CEEccccCchheeecc-cCcceeccCCcce
Confidence            4899999999999986 6789999997663

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.0068  Score=54.90  Aligned_cols=31  Identities=16%  Similarity=0.328  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||+++ ++.+.|+||-.|..
T Consensus       124 ~~iiHRDlKP~NILl~~-~g~vkl~DFG~a~~  154 (337)
T d1o6la_         124 RDVVYRDIKLENLMLDK-DGHIKITDFGLCKE  154 (337)
T ss_dssp             TTCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             cCccccccCHHHeEecC-CCCEEEeecccccc
Confidence            47799999999999986 68899999998864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=94.11  E-value=0.017  Score=50.52  Aligned_cols=31  Identities=23%  Similarity=0.435  Sum_probs=27.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++. ++.+.|+||..|..-
T Consensus       130 ~ivHrDlkp~Nill~~-~~~~kl~DFG~a~~~  160 (277)
T d1phka_         130 NIVHRDLKPENILLDD-DMNIKLTDFGFSCQL  160 (277)
T ss_dssp             TEECSCCSGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             CCcccccccceEEEcC-CCCeEEccchheeEc
Confidence            5999999999999976 688999999998653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=94.03  E-value=0.014  Score=50.53  Aligned_cols=30  Identities=23%  Similarity=0.390  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||++. ++.+.++||..|..
T Consensus       120 ~IvHrDiKp~NIll~~-~~~~kl~DfG~a~~  149 (286)
T d1ob3a_         120 RVLHRDLKPQNLLINR-EGELKIADFGLARA  149 (286)
T ss_dssp             TCCCSCCCGGGEEECT-TSCEEECCTTHHHH
T ss_pred             cEEecCCCCceeeEcC-CCCEEeccccccee
Confidence            4899999999999986 68899999987653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.91  E-value=0.02  Score=50.82  Aligned_cols=31  Identities=29%  Similarity=0.414  Sum_probs=27.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||+++ ++.+.|+||-.|...
T Consensus       135 ~iiHrDiKp~NILl~~-~~~~Kl~DFG~a~~~  165 (309)
T d1u5ra_         135 NMIHRDVKAGNILLSE-PGLVKLGDFGSASIM  165 (309)
T ss_dssp             TCBCCCCSGGGEEEET-TTEEEECCCTTCBSS
T ss_pred             CEeccCCCcceEEECC-CCCEEEeeccccccc
Confidence            4899999999999986 688999999888653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.84  E-value=0.0098  Score=51.38  Aligned_cols=31  Identities=16%  Similarity=0.309  Sum_probs=26.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|+|||++. .+.+.++||..|..
T Consensus       120 ~~IvHrDiKP~NIli~~-~~~~kl~DFG~a~~  150 (292)
T d1unla_         120 RNVLHRDLKPQNLLINR-NGELKLANFGLARA  150 (292)
T ss_dssp             TTEECCCCSGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCEeeecccCccccccc-CCceeeeecchhhc
Confidence            36899999999999976 67899999988753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.023  Score=49.27  Aligned_cols=30  Identities=23%  Similarity=0.391  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|..
T Consensus       129 ~ivHrDiKp~NIll~~-~~~~Kl~DFGla~~  158 (272)
T d1qpca_         129 NYIHRDLRAANILVSD-TLSCKIADFGLARL  158 (272)
T ss_dssp             TEECSCCSGGGEEECT-TSCEEECCCTTCEE
T ss_pred             CcccCccchhheeeec-ccceeeccccceEE
Confidence            4899999999999986 67899999998863

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.73  E-value=0.022  Score=49.65  Aligned_cols=31  Identities=32%  Similarity=0.390  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+||+|.|||++. ++.+.|+||-.|..-
T Consensus       124 ~ivHrDlKp~NiLl~~-~~~~Kl~DFGla~~~  154 (276)
T d1uwha_         124 SIIHRDLKSNNIFLHE-DLTVKIGDFGLATVK  154 (276)
T ss_dssp             TCCCSCCCGGGEEEET-TSSEEECCCCCSCC-
T ss_pred             CEeccccCHHHEEEcC-CCCEEEccccceeec
Confidence            4789999999999986 678999999888653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.014  Score=52.32  Aligned_cols=32  Identities=22%  Similarity=0.330  Sum_probs=27.7

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.|||+++ ++.+.|+||..|...
T Consensus       128 ~~iiHRDIKp~NILl~~-~~~~kl~DfG~a~~~  159 (345)
T d1pmea_         128 ANVLHRDLKPSNLLLNT-TCDLKICDFGLARVA  159 (345)
T ss_dssp             TTEECCCCCGGGEEECT-TCCEEECCCTTCEEC
T ss_pred             CCCcCCCCCcceEEECC-CCCEEEcccCceeec
Confidence            47999999999999986 688999999887643

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.66  E-value=0.011  Score=54.02  Aligned_cols=30  Identities=30%  Similarity=0.310  Sum_probs=26.3

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++. .+.+.|+||-.|.
T Consensus       126 ~~iiHrDlKP~NILl~~-~g~iKl~DFGla~  155 (364)
T d1omwa3         126 RFVVYRDLKPANILLDE-HGHVRISDLGLAC  155 (364)
T ss_dssp             TTEECCCCSGGGEEECS-SSCEEECCCTTCE
T ss_pred             CCccceeeccceeEEcC-CCcEEEeeeceee
Confidence            46799999999999986 6889999998775

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.62  E-value=0.017  Score=50.68  Aligned_cols=30  Identities=27%  Similarity=0.405  Sum_probs=26.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|..
T Consensus       135 ~iiHrDlKp~NILl~~-~~~~Kl~DFG~a~~  164 (287)
T d1opja_         135 NFIHRDLAARNCLVGE-NHLVKVADFGLSRL  164 (287)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCCCTTT
T ss_pred             CcccCccccCeEEECC-CCcEEEccccceee
Confidence            4899999999999986 57899999988764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.029  Score=49.89  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=26.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||+++. ++.+.|+||-.|..
T Consensus       184 ~IiHRDlKp~Nill~~-~~~~Kl~DFGla~~  213 (325)
T d1rjba_         184 SCVHRDLAARNVLVTH-GKVVKICDFGLARD  213 (325)
T ss_dssp             TEEETTCSGGGEEEET-TTEEEECCCGGGSC
T ss_pred             CeeeccCchhcccccc-CCeEEEeecccccc
Confidence            4899999999999986 68899999988764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.60  E-value=0.015  Score=51.46  Aligned_cols=34  Identities=21%  Similarity=0.201  Sum_probs=28.2

Q ss_pred             CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ...++|+||+|.|||+++ ++.+.|.||-.+..-.
T Consensus       126 ~~~IvHrDlKp~NILl~~-~~~~Kl~DFGl~~~~~  159 (303)
T d1vjya_         126 KPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHD  159 (303)
T ss_dssp             BCEEECSCCCGGGEEECT-TSCEEECCCTTCEEEE
T ss_pred             CCCeeccccCccceEEcC-CCCeEEEecCcccccc
Confidence            468899999999999986 6889999997665433

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.008  Score=52.67  Aligned_cols=29  Identities=31%  Similarity=0.440  Sum_probs=21.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       154 ~ivHrDlKp~NILl~~-~~~~Kl~DFGla~  182 (299)
T d1ywna1         154 KCIHRDLAARNILLSE-KNVVKICDFGLAR  182 (299)
T ss_dssp             TCCCSCCCGGGEEECG-GGCEEECC-----
T ss_pred             CCcCCcCCccceeECC-CCcEEEccCcchh
Confidence            4789999999999986 6789999998875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.36  E-value=0.025  Score=49.24  Aligned_cols=30  Identities=23%  Similarity=0.362  Sum_probs=24.4

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|..
T Consensus       130 ~iiHrDlKp~NILl~~-~~~~Kl~DFGla~~  159 (283)
T d1mqba_         130 NYVHRDLAARNILVNS-NLVCKVSDFGLSRV  159 (283)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECCCCC---
T ss_pred             ccccCccccceEEECC-CCeEEEcccchhhc
Confidence            4789999999999986 67899999998864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=93.28  E-value=0.017  Score=52.37  Aligned_cols=32  Identities=25%  Similarity=0.350  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeC-CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE-TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~-~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++. ..+.|.|+||-.|..
T Consensus       146 ~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~  178 (352)
T d1koba_         146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATK  178 (352)
T ss_dssp             TTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             CCeeecccccccccccccCCCeEEEeeccccee
Confidence            46899999999999973 357899999998864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.027  Score=49.06  Aligned_cols=31  Identities=23%  Similarity=0.385  Sum_probs=27.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .++|+|++|.|||+++ .+.+.++||..+...
T Consensus       136 ~ivHrDiKp~NILi~~-~~~~kl~dfg~~~~~  166 (305)
T d1blxa_         136 RVVHRDLKPQNILVTS-SGQIKLADFGLARIY  166 (305)
T ss_dssp             TCCCCCCCGGGEEECT-TCCEEECSCCSCCCC
T ss_pred             CEEecCCCccEEEEcC-CCCeeecchhhhhhh
Confidence            4899999999999986 688999999887654

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.033  Score=49.37  Aligned_cols=32  Identities=22%  Similarity=0.354  Sum_probs=24.2

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.|||++. ++.+.++||..|...
T Consensus       140 ~giiHrDiKp~NILi~~-~~~~kl~dfg~a~~~  171 (348)
T d2gfsa1         140 ADIIHRDLKPSNLAVNE-DCELKILDFGLARHT  171 (348)
T ss_dssp             TTCCCCCCCGGGEEECT-TCCEEECCC----CC
T ss_pred             CCCcccccCCccccccc-cccccccccchhccc
Confidence            36899999999999986 688999999887643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.56  E-value=0.044  Score=48.70  Aligned_cols=31  Identities=26%  Similarity=0.428  Sum_probs=26.9

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||++. ++.+.++||-.|..
T Consensus       140 ~~IiHrDiKp~NIL~~~-~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_         140 AGIIHRDLKPGNLAVNE-DCELKILDFGLARQ  170 (346)
T ss_dssp             TTEECCCCCGGGEEECT-TCCEEECCCTTCEE
T ss_pred             CCCcccccCcchhhccc-ccccccccccceec
Confidence            46999999999999986 68899999988754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.55  E-value=0.017  Score=51.04  Aligned_cols=29  Identities=21%  Similarity=0.336  Sum_probs=22.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       148 ~iiHrDlKp~NILl~~-~~~~Kl~DFGla~  176 (299)
T d1jpaa_         148 NYVHRDLAARNILVNS-NLVCKVSDFGLSR  176 (299)
T ss_dssp             TCCCSCCCGGGEEECT-TCCEEECCC----
T ss_pred             CCccCccccceEEECC-CCcEEECCcccce
Confidence            4689999999999986 6789999998775

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=92.53  E-value=0.05  Score=47.40  Aligned_cols=32  Identities=9%  Similarity=0.227  Sum_probs=26.5

Q ss_pred             eeeeecCCCCCCeeeeC----CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE----TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~----~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||++.    ..+.+.++||-.|..
T Consensus       120 ~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_         120 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             CCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            45999999999999963    246799999998864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.41  E-value=0.046  Score=47.49  Aligned_cols=30  Identities=20%  Similarity=0.352  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.++||-.|..
T Consensus       127 ~iiHrDlKp~Nill~~-~~~~kl~DFGla~~  156 (277)
T d1xbba_         127 NFVHRDLAARNVLLVT-QHYAKISDFGLSKA  156 (277)
T ss_dssp             TEECSCCSGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CcccCCCcchhhcccc-cCcccccchhhhhh
Confidence            3789999999999986 68899999988753

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.23  E-value=0.054  Score=46.58  Aligned_cols=33  Identities=21%  Similarity=0.264  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY   77 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~   77 (317)
                      ..++|+|++|.|||++. .+.+.++||..+....
T Consensus       130 ~~iiHrDiKP~NIll~~-~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_         130 NGIIHRDVKPANIMISA-TNAVKVMDFGIARAIA  162 (277)
T ss_dssp             TTEECCCCSGGGEEEET-TSCEEECCCTTCEECC
T ss_pred             CCccCccccCcccccCc-cccceeehhhhhhhhc
Confidence            45899999999999986 6789999998775433

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.74  E-value=0.04  Score=48.23  Aligned_cols=30  Identities=27%  Similarity=0.390  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||+++ ++.+.|.||..|..
T Consensus       133 ~ivH~DlKp~NIll~~-~~~~kl~DfGla~~  162 (285)
T d1fmka3         133 NYVHRDLRAANILVGE-NLVCKVADFGLARL  162 (285)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCCTTC-
T ss_pred             heecccccceEEEECC-CCcEEEcccchhhh
Confidence            4799999999999986 57899999998864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.018  Score=49.69  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=23.3

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       121 ~iiHrDlKp~Nill~~-~~~~Kl~DFGla~  149 (263)
T d1sm2a_         121 CVIHRDLAARNCLVGE-NQVIKVSDFGMTR  149 (263)
T ss_dssp             TCCCTTCSGGGEEECG-GGCEEECSCC---
T ss_pred             ceeecccchhheeecC-CCCeEecccchhe
Confidence            4699999999999986 5789999998765

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=91.37  E-value=0.034  Score=50.28  Aligned_cols=32  Identities=22%  Similarity=0.441  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCC-CCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDET-EDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++.+ ++.+.|+||-.|..
T Consensus       143 ~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~  175 (350)
T d1koaa2         143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  175 (350)
T ss_dssp             TTEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             cCCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence            357999999999999642 46799999988764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.31  E-value=0.034  Score=48.72  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||+++ ++.+.+.||..|.
T Consensus       136 ~~ivHrDlKp~NILl~~-~~~~kl~dfg~~~  165 (318)
T d3blha1         136 NKILHRDMKAANVLITR-DGVLKLADFGLAR  165 (318)
T ss_dssp             TTEECCCCCGGGEEECT-TSCEEECCCTTCE
T ss_pred             CCEEecCcCchheeecC-CCcEEeeecceee
Confidence            46899999999999986 6789999998875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.068  Score=47.44  Aligned_cols=30  Identities=23%  Similarity=0.402  Sum_probs=26.9

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||+++ .+.+.++||-.|..
T Consensus       123 ~iiHrDikp~NiL~~~-~~~~kl~DFG~a~~  152 (320)
T d1xjda_         123 GIVYRDLKLDNILLDK-DGHIKIADFGMCKE  152 (320)
T ss_dssp             TCBCCCCCGGGEEECT-TSCEEECCCTTCBC
T ss_pred             CeeeccCcccceeecC-CCceeccccchhhh
Confidence            5999999999999986 68899999988874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.21  E-value=0.021  Score=50.14  Aligned_cols=29  Identities=28%  Similarity=0.391  Sum_probs=25.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       160 ~ivHrDlKp~NILld~-~~~~Kl~DFGls~  188 (301)
T d1lufa_         160 KFVHRDLATRNCLVGE-NMVVKIADFGLSR  188 (301)
T ss_dssp             TCCCSCCSGGGEEECG-GGCEEECCCSCHH
T ss_pred             CeEeeEEcccceEECC-CCcEEEccchhhe
Confidence            4679999999999986 5789999998764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.20  E-value=0.034  Score=48.70  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=26.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|..
T Consensus       129 ~iiHrDlKp~Nill~~-~~~~Kl~DFGla~~  158 (285)
T d1u59a_         129 NFVHRDLAARNVLLVN-RHYAKISDFGLSKA  158 (285)
T ss_dssp             TEECCCCSGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CeecCcCchhheeecc-CCceeeccchhhhc
Confidence            4789999999999986 68899999987753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.10  E-value=0.028  Score=48.44  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=21.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .+.|+||+|.||++++ .+.+.++||-.|..
T Consensus       128 ~iiHrDlKp~NIll~~-~~~~Kl~DfG~a~~  157 (273)
T d1mp8a_         128 RFVHRDIAARNVLVSS-NDCVKLGDFGLSRY  157 (273)
T ss_dssp             TCCCSCCSGGGEEEEE-TTEEEECC------
T ss_pred             CeeccccchhheeecC-CCcEEEccchhhee
Confidence            4679999999999986 68899999987754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.057  Score=47.57  Aligned_cols=29  Identities=24%  Similarity=0.413  Sum_probs=25.5

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||+|.|||+++ ++.+.|.||-.|.
T Consensus       131 ~iiHrDlKp~NIll~~-~~~~kl~DFGla~  159 (317)
T d1xkka_         131 RLVHRDLAARNVLVKT-PQHVKITDFGLAK  159 (317)
T ss_dssp             TCCCSCCCGGGEEEEE-TTEEEECCCSHHH
T ss_pred             CcccCcchhhcceeCC-CCCeEeeccccce
Confidence            4799999999999986 6789999997765

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.91  E-value=0.04  Score=49.38  Aligned_cols=32  Identities=19%  Similarity=0.447  Sum_probs=26.1

Q ss_pred             eeeeecCCCCCCeeeeCC--CCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDET--EDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||+++.  .+.+.|+||..|..
T Consensus       130 ~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1         130 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             cCCccccccccccccccccccccccccccceeee
Confidence            468999999999999752  35689999988753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.19  E-value=0.037  Score=49.26  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+|++|.|||++. ++.+.|+||-.|..
T Consensus       149 ~ivHrDiKp~Nill~~-~~~vkL~DFG~a~~  178 (322)
T d1vzoa_         149 GIIYRDIKLENILLDS-NGHVVLTDFGLSKE  178 (322)
T ss_dssp             TCCCCCCCGGGEEECT-TSCEEESCSSEEEE
T ss_pred             CEEeccCCccceeecC-CCCEEEeeccchhh
Confidence            4889999999999987 58899999988753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.94  E-value=0.045  Score=48.38  Aligned_cols=32  Identities=22%  Similarity=0.444  Sum_probs=22.7

Q ss_pred             eeeeecCCCCCCeeeeC--CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE--TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||+..  .++.+.++||-.|..
T Consensus       126 ~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~  159 (307)
T d1a06a_         126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM  159 (307)
T ss_dssp             TTCCCSCCCGGGEEESSSSTTCCEEECCC-----
T ss_pred             ceeeeEEecccceeecccCCCceEEEeccceeEE
Confidence            35899999999999853  257899999998864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.93  E-value=0.056  Score=48.00  Aligned_cols=31  Identities=26%  Similarity=0.386  Sum_probs=25.2

Q ss_pred             eeeeecCCCCCCeeeeCC-CCeEEEEeecccc
Q psy8745          44 VVFCHNDLLLGNIIYDET-EDKVTFIDYEYAG   74 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~   74 (317)
                      ..++|+||+|.|||++.+ ...|.++||-.+.
T Consensus       121 ~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~  152 (321)
T d1tkia_         121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             cCCCcccccccceeecCCCceEEEEcccchhh
Confidence            469999999999999742 3478999997665

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.92  E-value=0.044  Score=48.24  Aligned_cols=29  Identities=28%  Similarity=0.358  Sum_probs=25.1

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG   74 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~   74 (317)
                      .++|+||++.|||+++ ++.+.|.||-.|.
T Consensus       153 ~ivHrDlk~~NiLld~-~~~~Kl~DFGla~  181 (308)
T d1p4oa_         153 KFVHRDLAARNCMVAE-DFTVKIGDFGMTR  181 (308)
T ss_dssp             TCBCSCCSGGGEEECT-TCCEEECCTTCCC
T ss_pred             CeeeceEcCCceeecC-CceEEEeecccce
Confidence            4689999999999986 6789999997764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.068  Score=47.76  Aligned_cols=58  Identities=14%  Similarity=0.174  Sum_probs=34.9

Q ss_pred             hhhcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          15 FQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        15 ~~~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      +...+|  .+.+..-+..+...+... ....++|+|++|.|||++. ++.+.++||..+...
T Consensus       112 ~~~~~~--~~~i~~~~~qil~gl~~L-H~~giiHrDlKP~Nil~~~-~~~~kl~df~~~~~~  169 (355)
T d2b1pa1         112 IQMELD--HERMSYLLYQMLCGIKHL-HSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTA  169 (355)
T ss_dssp             HTSCCC--HHHHHHHHHHHHHHHHHH-HHTTCCCSCCCGGGEEECT-TCCEEECCCCC----
T ss_pred             hhcCCC--HHHHHHHHHHHHHHHHHh-hhcccccccCCcccccccc-ccceeeechhhhhcc
Confidence            344555  444544444443333221 1235899999999999986 678999999766543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.73  E-value=0.12  Score=44.51  Aligned_cols=30  Identities=27%  Similarity=0.389  Sum_probs=26.0

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||+++. ++.+.+.||..+..
T Consensus       131 ~iiHrDikp~NIll~~-~~~vkl~DfGl~~~  160 (273)
T d1u46a_         131 RFIHRDLAARNLLLAT-RDLVKIGDFGLMRA  160 (273)
T ss_dssp             TEECSCCCGGGEEEEE-TTEEEECCCTTCEE
T ss_pred             CEeeeeecHHHhcccc-ccceeeccchhhhh
Confidence            4899999999999987 67899999987663

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.65  E-value=0.13  Score=45.03  Aligned_cols=30  Identities=23%  Similarity=0.255  Sum_probs=25.8

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .++|+||+|.||+++. .+.+.++||-.+..
T Consensus       165 ~ivHrDLKp~NIl~~~-~~~~ki~DfG~~~~  194 (311)
T d1t46a_         165 NCIHRDLAARNILLTH-GRITKICDFGLARD  194 (311)
T ss_dssp             TCCCSCCSGGGEEEET-TTEEEECCCGGGSC
T ss_pred             Ceeecccccccccccc-cCcccccccchhee
Confidence            3679999999999986 68899999987763

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.56  E-value=0.056  Score=46.45  Aligned_cols=30  Identities=23%  Similarity=0.388  Sum_probs=26.2

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      .+.|+||++.||++++ ++.+.|.||..|..
T Consensus       120 ~iiH~dlk~~Nill~~-~~~~kl~DfG~a~~  149 (258)
T d1k2pa_         120 QFLHRDLAARNCLVND-QGVVKVSDFGLSRY  149 (258)
T ss_dssp             TBCCSCCSGGGEEECT-TCCEEECCCSSCCB
T ss_pred             CcccccccceeEEEcC-CCcEEECcchhhee
Confidence            5789999999999986 67899999998853

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.35  E-value=0.05  Score=47.56  Aligned_cols=32  Identities=22%  Similarity=0.296  Sum_probs=27.0

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      ..++|+|++|.|||++. ++.+.|.||..+...
T Consensus       154 ~~ivHrDiKp~NiLl~~-~~~~kl~dfg~~~~~  185 (299)
T d1fgka_         154 KKCIHRDLAARNVLVTE-DNVMKIADFGLARDI  185 (299)
T ss_dssp             TTCCCSCCSGGGEEECT-TCCEEECSTTCCCCG
T ss_pred             CCEEeeeecccceeecC-CCCeEeccchhhccc
Confidence            35799999999999986 678999999887744

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.26  E-value=0.064  Score=46.65  Aligned_cols=32  Identities=25%  Similarity=0.380  Sum_probs=25.7

Q ss_pred             eeeeecCCCCCCeeeeCCC---CeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETE---DKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~---~~l~lIDfEya~~   75 (317)
                      ..++|+|++|.|||++.++   ..+.++||-.|..
T Consensus       132 ~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_         132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             TTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             cceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            3589999999999997532   2599999988764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.09  E-value=0.056  Score=47.76  Aligned_cols=29  Identities=34%  Similarity=0.452  Sum_probs=25.5

Q ss_pred             eeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      +.|+||++.|||+++ .+.+.|.||-.+..
T Consensus       151 iiHrDLK~~NILl~~-~~~~kL~DFG~~~~  179 (311)
T d1r0pa_         151 FVHRDLAARNCMLDE-KFTVKVADFGLARD  179 (311)
T ss_dssp             CCCSCCSGGGEEECT-TCCEEECSSGGGCC
T ss_pred             cccCCccHHhEeECC-CCCEEEecccchhh
Confidence            679999999999986 67899999988864

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.75  E-value=0.13  Score=44.47  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=25.3

Q ss_pred             eeeeecCCCCCCeeeeC--CCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDE--TEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~--~~~~l~lIDfEya~~   75 (317)
                      ..++|+||+|.|||++.  .+..+.++||-.|..
T Consensus       122 ~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~  155 (299)
T d1ckia_         122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  155 (299)
T ss_dssp             TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred             CCeeeccCCHhhccccccCCCceeeeeccCccee
Confidence            35999999999999753  234699999988763

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.67  E-value=0.072  Score=47.06  Aligned_cols=52  Identities=12%  Similarity=0.136  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCC-----eEEEEeecccc
Q psy8745          23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETED-----KVTFIDYEYAG   74 (317)
Q Consensus        23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~-----~l~lIDfEya~   74 (317)
                      ...+..-+..+...+........++|+|++|.|||++..+.     .+.++||--|.
T Consensus       124 ~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~  180 (362)
T d1q8ya_         124 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC  180 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccc
Confidence            44454444444433332222457999999999999964221     47888886654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.99  E-value=0.075  Score=46.61  Aligned_cols=31  Identities=26%  Similarity=0.351  Sum_probs=26.6

Q ss_pred             eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745          45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN   76 (317)
Q Consensus        45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n   76 (317)
                      .+.|+||+|.|||++. .+.+.|.||..|...
T Consensus       147 ~iiHrDlkp~NIL~~~-~~~~kl~DfG~a~~~  177 (309)
T d1fvra_         147 QFIHRDLAARNILVGE-NYVAKIADFGLSRGQ  177 (309)
T ss_dssp             TEECSCCSGGGEEECG-GGCEEECCTTCEESS
T ss_pred             CccccccccceEEEcC-CCceEEccccccccc
Confidence            4799999999999976 578999999988643

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.57  E-value=0.14  Score=43.96  Aligned_cols=31  Identities=23%  Similarity=0.380  Sum_probs=24.8

Q ss_pred             eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745          44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV   75 (317)
Q Consensus        44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~   75 (317)
                      ..+.|+|++|.||+++. ++.+.+.||..+..
T Consensus       122 ~~ivH~dlkp~Nil~~~-~~~~kl~dfg~s~~  152 (262)
T d1byga_         122 NNFVHRDLAARNVLVSE-DNVAKVSDFGLTKE  152 (262)
T ss_dssp             TTCCCSCCSGGGEEECT-TSCEEECCCCC---
T ss_pred             CceeccccchHhheecC-CCCEeeccccccee
Confidence            35899999999999986 67899999988764