Psyllid ID: psy8758

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH
Secondary Structure (PSIPRED)
cccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEEEcccccEEEEEEccccEEEEccccccccccccccccEEEEEcccccEEEEEccccccccEEEccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEccccccccEEEEEEcccccEEEEEcccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEcccccccccEEEEEEccccccEEEEcccccEEEEEEccccEEEEEcccccEEEEEccccEEEEEEcccccccEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEccccEEEEEEccccccccc
Coil and Loop (DISEMBL)
MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSnmvswnpmEAFVFTAAnedfnlysydirqlnsplnvhkdmtsaaanedfnlysydirqlnsplnvhkdmtsavtsvdysptgrefvaggYDKSLRLYLAHqghsrdiyhtkrMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH
Flexible Loop (DISEMBL)
mqhvthtvwsldnkfvISASDEMNLRVWKAhaseklgpiRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAvtsvdysptgREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAhasekleh
Low Complexity Region (SEG)
MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH
Disordered region (IsUnstruct)
****THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK*********
Disordered Region (DISOPRED)
MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK***
Disordered Region (DISEMBL)
MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA********
Disordered Region (DISPRO)
*QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q803X4	445	DDB1- and CUL4-associated	yes	N/A	0.661	0.294	0.518	3e-44
Q6NVS5	445	DDB1- and CUL4-associated	yes	N/A	0.671	0.298	0.493	4e-44
Q7ZYQ6	445	DDB1- and CUL4-associated	N/A	N/A	0.671	0.298	0.493	6e-44
Q5ZLK1	445	DDB1- and CUL4-associated	yes	N/A	0.656	0.292	0.477	2e-41
Q9NV06	445	DDB1- and CUL4-associated	yes	N/A	0.656	0.292	0.465	2e-40
Q6PAC3	445	DDB1- and CUL4-associated	yes	N/A	0.656	0.292	0.465	1e-39
Q5R4T8	445	DDB1- and CUL4-associated	yes	N/A	0.656	0.292	0.459	1e-39
O74340	436	Protein sof1 OS=Schizosac	yes	N/A	0.651	0.295	0.455	7e-36
P33750	489	Protein SOF1 OS=Saccharom	yes	N/A	0.651	0.263	0.455	4e-35
Q7KWL3	445	DDB1- and CUL4-associated	yes	N/A	0.732	0.325	0.4	1e-30

>sp|Q803X4|DCA13_DANRE DDB1- and CUL4-associated factor 13 OS=Danio rerio GN=dcaf13 PE=2 SV=1

 Score =  178 bits (451), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 83/160 (51%), Positives = 106/160 (66%), Gaps = 29/160 (18%)

Query: 37  GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANED 96
            P+RKV+M LRSN + WNPMEA+ FT ANED                             
Sbjct: 230 APLRKVIMQLRSNTLCWNPMEAYYFTCANED----------------------------- 260

Query: 97  FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156
           +NLY+YDIR L+ P+ VH D  SAV  VDYSPTGREFV+  +DK++R++   +GHSR++Y
Sbjct: 261 YNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTGREFVSASFDKTIRIFPKDKGHSREVY 320

Query: 157 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           HTKRMQHV    WS D+KF++S SDEMN+R+WKA+ASEKL
Sbjct: 321 HTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKANASEKL 360

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.
Danio rerio (taxid: 7955)

>sp|Q6NVS5|DCA13_XENTR DDB1- and CUL4-associated factor 13 OS=Xenopus tropicalis GN=dcaf13 PE=2 SV=1

 Score =  177 bits (449), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 108/162 (66%), Gaps = 29/162 (17%)

Query: 35  KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAAN 94
           K  P++K+++ +R+N + WNPMEAF+FTAANE+                           
Sbjct: 228 KPTPLKKIILEMRTNTLCWNPMEAFIFTAANEN--------------------------- 260

Query: 95  EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD 154
             FNLY+YD+R ++ P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++    GHSR+
Sbjct: 261 --FNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVQSGHSRE 318

Query: 155 IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           +YHTKRMQHVT   WS DNK+V+  SDEMN+R+WKA+ASEKL
Sbjct: 319 VYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKL 360

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Xenopus tropicalis (taxid: 8364)

>sp|Q7ZYQ6|DCA13_XENLA DDB1- and CUL4-associated factor 13 OS=Xenopus laevis GN=dcaf13 PE=2 SV=1

 Score =  176 bits (447), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 108/162 (66%), Gaps = 29/162 (17%)

Query: 35  KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAAN 94
           K  P++K+++ +R+N + WNPMEAF+FTAANE+                           
Sbjct: 228 KPTPLKKIILEMRTNALCWNPMEAFIFTAANEN--------------------------- 260

Query: 95  EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD 154
             FNLY+YD+R ++SP+ VH D  SAV  VDYSPTG+E V+  +DKS+R++    GHSR+
Sbjct: 261 --FNLYTYDMRYMDSPVKVHMDHVSAVLDVDYSPTGKELVSASFDKSIRIFPVQSGHSRE 318

Query: 155 IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           +YHTKRMQHVT   WS DNK+V+  SDEMN+R+WKA+ASEKL
Sbjct: 319 VYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKL 360

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Xenopus laevis (taxid: 8355)

>sp|Q5ZLK1|DCA13_CHICK DDB1- and CUL4-associated factor 13 OS=Gallus gallus GN=DCAF13 PE=2 SV=1

 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 108/159 (67%), Gaps = 29/159 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P++KV++++R+N + WNPMEAF+FTAANE                             D+
Sbjct: 231 PLKKVILNMRTNTLCWNPMEAFIFTAANE-----------------------------DY 261

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           NLY++D+R L SP+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +GHSR++YH
Sbjct: 262 NLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRIFPVDKGHSREVYH 321

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           TKRMQHV    W+ D+++++  SDEMN+R+WKA+ASEKL
Sbjct: 322 TKRMQHVITVKWTSDSRYILCGSDEMNIRLWKANASEKL 360

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Gallus gallus (taxid: 9031)

>sp|Q9NV06|DCA13_HUMAN DDB1- and CUL4-associated factor 13 OS=Homo sapiens GN=DCAF13 PE=1 SV=2

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 106/159 (66%), Gaps = 29/159 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P++KV++ +R+N + WNPMEAF+FTAA                             NED+
Sbjct: 231 PLKKVILDMRTNTICWNPMEAFIFTAA-----------------------------NEDY 261

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           NLY++D+R L++P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YH
Sbjct: 262 NLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYH 321

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           TKRMQHV    W+ D+K+++  SDEMN+R+WKA+ASEKL
Sbjct: 322 TKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL 360

Possible role in ribosomal RNA processing (By similarity). May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Homo sapiens (taxid: 9606)

>sp|Q6PAC3|DCA13_MOUSE DDB1- and CUL4-associated factor 13 OS=Mus musculus GN=Dcaf13 PE=2 SV=2

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 105/159 (66%), Gaps = 29/159 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P++KV++ +R+N + WNPMEAF FTAANE                             D+
Sbjct: 231 PLKKVILEMRTNTICWNPMEAFNFTAANE-----------------------------DY 261

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           NLY++D+R L++P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YH
Sbjct: 262 NLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYH 321

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           TKRMQHV    W+ D+K+++  SDEMN+R+WKA+ASEKL
Sbjct: 322 TKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKL 360

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Mus musculus (taxid: 10090)

>sp|Q5R4T8|DCA13_PONAB DDB1- and CUL4-associated factor 13 OS=Pongo abelii GN=DCAF13 PE=2 SV=1

 Score =  162 bits (410), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 105/159 (66%), Gaps = 29/159 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P++KV++ +R+N + WNPMEAF+FTAA                             NED+
Sbjct: 231 PLKKVILDMRTNTICWNPMEAFIFTAA-----------------------------NEDY 261

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           NLY++D+  L++P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YH
Sbjct: 262 NLYTFDMSALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYH 321

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           TKRMQHV    W+ D+K+++  SDEMN+R+WKA+ASEKL
Sbjct: 322 TKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL 360

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Pongo abelii (taxid: 9601)

>sp|O74340|DCA13_SCHPO Protein sof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sof1 PE=3 SV=1

 Score =  150 bits (378), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 29/158 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P+ K++  LR+N +SWNPMEAF F                              A +ED 
Sbjct: 222 PLTKLITKLRTNSISWNPMEAFNF-----------------------------VAGSEDH 252

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           NLY YD+R L   L+V+KD  SAV SVD+SPTG+EFV+G YDK++R+Y   +GHSRD+YH
Sbjct: 253 NLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRIYNVREGHSRDVYH 312

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195
           TKRMQ VT   +S+D +++ S SD+ N+R+W+A AS +
Sbjct: 313 TKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSR 350

Required for ribosomal RNA processing.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P33750|DCA13_YEAST Protein SOF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SOF1 PE=1 SV=1

 Score =  147 bits (372), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 29/158 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P +K+V ++R+N + WNPMEAF F                               ANED 
Sbjct: 254 PTQKIVQTMRTNAICWNPMEAFNF-----------------------------VTANEDH 284

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           N Y YD+R L+  LNV KD  SAV  VD+SPTG E V G YDKS+R+Y  + GHSR+IYH
Sbjct: 285 NAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHSREIYH 344

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195
           TKRMQHV    +S+D+K++IS SD+ N+R+W++ A E+
Sbjct: 345 TKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWER 382

Required for ribosomal RNA processing.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q7KWL3|DCA13_DICDI DDB1- and CUL4-associated factor 13 OS=Dictyostelium discoideum GN=wdsof1 PE=3 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 98/160 (61%), Gaps = 15/160 (9%)

Query: 51  VSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN--------------VHKDMTSAAANED 96
           V +NP+E  +  +   D ++  YDIR+ NSP                  +  T A ANED
Sbjct: 203 VKFNPIETHLLASCTTDRDIILYDIRE-NSPAQKLTTSMRSNSIAWCPTESFTLAIANED 261

Query: 97  FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156
            N+Y YDIR L+  + VH+D   +V  +DYSPTGRE V+G YDK++R++      SR++Y
Sbjct: 262 ENVYQYDIRNLSKAMTVHRDHVGSVLDIDYSPTGREIVSGSYDKTIRIFPVDSYKSREVY 321

Query: 157 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           +T RMQ +   +++ D++F++S SD+MN+RVWKA++S  L
Sbjct: 322 YTNRMQRIFSVLFTADSRFILSGSDDMNIRVWKANSSAPL 361

Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
193610701	441	PREDICTED: DDB1- and CUL4-associated fac	0.681	0.306	0.548	4e-49
383862327	445	PREDICTED: DDB1- and CUL4-associated fac	0.762	0.339	0.521	3e-47
357614240	447	hypothetical protein KGM_21307 [Danaus p	0.661	0.293	0.55	2e-46
332022306	444	WD repeat and SOF domain-containing prot	0.681	0.304	0.524	6e-46
321461588	453	hypothetical protein DAPPUDRAFT_308127 [	0.656	0.286	0.547	1e-45
66506992	445	PREDICTED: DDB1- and CUL4-associated fac	0.803	0.357	0.479	2e-45
380021475	445	PREDICTED: LOW QUALITY PROTEIN: DDB1- an	0.762	0.339	0.5	2e-45
91076846	445	PREDICTED: similar to GA20229-PA [Tribol	0.661	0.294	0.525	3e-45
307184802	443	WD repeat and SOF domain-containing prot	0.681	0.304	0.524	4e-45
340712999	444	PREDICTED: LOW QUALITY PROTEIN: DDB1- an	0.762	0.340	0.494	8e-45

>gi|193610701|ref|XP_001951408.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Acyrthosiphon pisum]

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 90/164 (54%), Positives = 118/164 (71%), Gaps = 29/164 (17%)

Query: 33  SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAA 92
           + ++ P+RK++M L++N ++WNPMEA+VFTAANE                          
Sbjct: 222 TREVKPMRKIIMKLKTNQLAWNPMEAYVFTAANE-------------------------- 255

Query: 93  ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152
              D+N YSYD R L SP+NVHKD  +AVT +DY+PTG EFV G YDK++R++ +HQGHS
Sbjct: 256 ---DYNCYSYDTRNLESPINVHKDHVAAVTCIDYAPTGLEFVTGSYDKTIRIFESHQGHS 312

Query: 153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           R+IYHTKRMQH+T  +WSLDNKFV+SASDEMN+R+WKA+ASEKL
Sbjct: 313 REIYHTKRMQHLTSVIWSLDNKFVLSASDEMNIRIWKANASEKL 356

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862327|ref|XP_003706635.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Megachile rotundata]

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 96/184 (52%), Positives = 118/184 (64%), Gaps = 33/184 (17%)

Query: 13  NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS 72
           N F   ASD    R    + +   GP+RKV M LRSN +SWNPMEA  FT ANE      
Sbjct: 210 NLFAACASD----RSIILYDARDTGPLRKVYMRLRSNKLSWNPMEAVTFTCANE------ 259

Query: 73  YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE 132
                                  D+NLY+YDIR+L +P+NVHKD   AV  VDY+PTGRE
Sbjct: 260 -----------------------DYNLYTYDIRKLKTPVNVHKDHVEAVVDVDYAPTGRE 296

Query: 133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192
           FV+G YDKS+R++  H+GHSR++YHTKRMQ +T   WSLDNK+V+S SDEMN+RVWKA A
Sbjct: 297 FVSGSYDKSIRIFEVHKGHSREVYHTKRMQRLTCVAWSLDNKYVLSGSDEMNIRVWKAKA 356

Query: 193 SEKL 196
           +EKL
Sbjct: 357 AEKL 360

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614240|gb|EHJ68981.1| hypothetical protein KGM_21307 [Danaus plexippus]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/160 (55%), Positives = 113/160 (70%), Gaps = 29/160 (18%)

Query: 37  GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANED 96
           GP+RKVVM LRSN +SWNPMEA++FT ANED+                            
Sbjct: 232 GPLRKVVMELRSNALSWNPMEAYIFTVANEDY---------------------------- 263

Query: 97  FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156
            NLY++DIR+L  P+NVH D TSAV  VDY+PTGREFVAG YDK++R++ + +GHSRD+Y
Sbjct: 264 -NLYTFDIRKLRQPVNVHVDHTSAVIDVDYAPTGREFVAGSYDKTVRIFESLKGHSRDVY 322

Query: 157 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           HTKRMQ +T   W+LDNK++++ SDEMN+R+WKA ASEKL
Sbjct: 323 HTKRMQRLTCVKWTLDNKYILTGSDEMNIRMWKARASEKL 362

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022306|gb|EGI62618.1| WD repeat and SOF domain-containing protein 1 [Acromyrmex echinatior]

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 112/164 (68%), Gaps = 29/164 (17%)

Query: 33  SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAA 92
           + + GP+ +++M LRSN +SWNPMEAF+FT ANED                         
Sbjct: 225 TRETGPLTRIIMKLRSNKLSWNPMEAFIFTCANED------------------------- 259

Query: 93  ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152
               +NLY+YD R++ +P+N+H D   AV  VDYSPTGREFV+G YDKS+R++ A++GHS
Sbjct: 260 ----YNLYTYDTRKMKTPVNIHMDHVEAVIDVDYSPTGREFVSGSYDKSIRIFEANKGHS 315

Query: 153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           R++YHT+RM  +T   WSLDNKFVIS SDEMNLR+WKA ASEKL
Sbjct: 316 REVYHTRRMHRLTCVGWSLDNKFVISGSDEMNLRIWKAKASEKL 359

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321461588|gb|EFX72618.1| hypothetical protein DAPPUDRAFT_308127 [Daphnia pulex]

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/159 (54%), Positives = 108/159 (67%), Gaps = 29/159 (18%)

Query: 38  PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF 97
           P+RKVV+ +RSN + WNPMEAF+FT ANED+                             
Sbjct: 240 PLRKVVLKMRSNSICWNPMEAFIFTVANEDY----------------------------- 270

Query: 98  NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157
           NLY++D+R LNSPLNVH D  SAV  VDYSPTG+EFV+  YDK++R+Y A Q HSRDIYH
Sbjct: 271 NLYTFDMRNLNSPLNVHSDHVSAVIDVDYSPTGKEFVSASYDKTVRIYDARQAHSRDIYH 330

Query: 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           TKRMQ +T   WSLD++F+ S SDEMN+R+WKA A+EKL
Sbjct: 331 TKRMQRLTCAAWSLDDRFIFSGSDEMNIRIWKARAAEKL 369

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66506992|ref|XP_394497.2| PREDICTED: DDB1- and CUL4-associated factor 13-like [Apis mellifera]

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/196 (47%), Positives = 123/196 (62%), Gaps = 37/196 (18%)

Query: 9   WSLDNKFVISASD-EMNL-------RVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFV 60
           W +D  + I  +  +MNL       R    + + + GP+RKV M LR+N ++WNPMEA  
Sbjct: 194 WGIDTLYDIKYNPVQMNLFAACGSDRSIILYDARETGPLRKVFMRLRTNRLAWNPMEAIT 253

Query: 61  FTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA 120
           FT ANE                             D+NLY+YDIR+L +P+NVH D   A
Sbjct: 254 FTCANE-----------------------------DYNLYTYDIRKLKTPVNVHMDHVEA 284

Query: 121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS 180
           V  VDYSPTG+EFV+G YDKS+R++  ++GHSR++YHTKRMQ +T   WSLDNK++IS S
Sbjct: 285 VIDVDYSPTGKEFVSGSYDKSIRIFEVNKGHSREVYHTKRMQRLTCMGWSLDNKYIISGS 344

Query: 181 DEMNLRVWKAHASEKL 196
           DEMN+RVWKA ASEKL
Sbjct: 345 DEMNIRVWKARASEKL 360

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021475|ref|XP_003694590.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13-like [Apis florea]

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 117/184 (63%), Gaps = 33/184 (17%)

Query: 13  NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS 72
           N F    SD    R    + + + GP+RKV M LR+N ++WNPMEA  FT ANE      
Sbjct: 210 NLFAACGSD----RSIILYDARETGPLRKVFMRLRTNRLAWNPMEAITFTCANE------ 259

Query: 73  YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE 132
                                  D+NLY+YDIR+L +P+NVH D   AV  VDYSPTG+E
Sbjct: 260 -----------------------DYNLYTYDIRKLKTPVNVHMDHVEAVIDVDYSPTGKE 296

Query: 133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192
           FV+G YDKS+R++  ++GHSR++YHTKRMQ +T   WSLDNK++IS SDEMN+RVWKA A
Sbjct: 297 FVSGSYDKSIRIFEXNKGHSREVYHTKRMQRLTCMGWSLDNKYIISGSDEMNIRVWKARA 356

Query: 193 SEKL 196
           SEKL
Sbjct: 357 SEKL 360

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076846|ref|XP_974788.1| PREDICTED: similar to GA20229-PA [Tribolium castaneum] gi|270001818|gb|EEZ98265.1| hypothetical protein TcasGA2_TC000707 [Tribolium castaneum]

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 109/160 (68%), Gaps = 29/160 (18%)

Query: 37  GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANED 96
            P+RKVVM LR+N +SWNPMEAF+FT ANED                             
Sbjct: 230 APLRKVVMKLRTNKISWNPMEAFIFTGANED----------------------------- 260

Query: 97  FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156
           +NLY++D R L  P+N+H D   AVTS+DY+PTGREFV+G YDK++R++   +GHSR+IY
Sbjct: 261 YNLYTFDTRNLKQPVNIHMDHVGAVTSIDYAPTGREFVSGSYDKTVRIFETSKGHSREIY 320

Query: 157 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           HTKRMQ +T   W+LDNK+++S SDEMN+R+WKA ASEKL
Sbjct: 321 HTKRMQRLTCVQWTLDNKYILSGSDEMNIRIWKARASEKL 360

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307184802|gb|EFN71116.1| WD repeat and SOF domain-containing protein 1 [Camponotus floridanus]

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 29/164 (17%)

Query: 33  SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAA 92
           + + GP+ ++VM LRSN +SWNPMEAF FT ANED                         
Sbjct: 224 TRETGPLTRIVMKLRSNKLSWNPMEAFTFTCANED------------------------- 258

Query: 93  ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152
               +NLY+YDIR+L +P+NVH D   AV  VDYSPTG+EFV+G YDKS+R++  ++GHS
Sbjct: 259 ----YNLYTYDIRKLKTPINVHMDHVEAVIDVDYSPTGKEFVSGSYDKSIRIFEVNKGHS 314

Query: 153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           R++YHTKRM  +T   WSLD+K++IS SDEMNLR+WKA ASEKL
Sbjct: 315 REVYHTKRMHRLTCVGWSLDDKYIISGSDEMNLRIWKAKASEKL 358

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712999|ref|XP_003395039.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13-like [Bombus terrestris]

 Score =  185 bits (470), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 91/184 (49%), Positives = 117/184 (63%), Gaps = 33/184 (17%)

Query: 13  NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS 72
           N F   ASD    R    + + + GP+RKV M LR+N +SWNPMEA  FT ANE      
Sbjct: 209 NLFAACASD----RSIILYDARETGPLRKVYMRLRTNKLSWNPMEAVTFTCANE------ 258

Query: 73  YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE 132
                                  D+NLY+YDIR+L +P+NVH D   AV  VDYSPTG+E
Sbjct: 259 -----------------------DYNLYTYDIRKLRTPVNVHMDHVQAVIDVDYSPTGKE 295

Query: 133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192
           FV+G YD+S+R++  ++G SR++YHTKRMQ +T   WSLDNK+++S SDEMN+RVWKA A
Sbjct: 296 FVSGSYDRSIRIFEVNKGRSREVYHTKRMQRLTCMAWSLDNKYIVSGSDEMNIRVWKAKA 355

Query: 193 SEKL 196
           SEKL
Sbjct: 356 SEKL 359

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
FB|FBgn0036500	446	CG7275 [Drosophila melanogaste	0.909	0.403	0.459	2.3e-39
UNIPROTKB|Q7ZYQ6	445	dcaf13 "DDB1- and CUL4-associa	0.904	0.402	0.434	3.9e-37
UNIPROTKB|Q6NVS5	445	dcaf13 "DDB1- and CUL4-associa	0.888	0.395	0.425	6.3e-37
UNIPROTKB|Q5ZLK1	445	DCAF13 "DDB1- and CUL4-associa	0.939	0.417	0.403	7.2e-36
UNIPROTKB|F1S1E1	445	DCAF13 "Uncharacterized protei	0.944	0.420	0.405	1.2e-35
ZFIN|ZDB-GENE-040426-703	445	dcaf13 "ddb1 and cul4 associat	0.732	0.325	0.487	1.5e-35
UNIPROTKB|F1P9T8	445	DCAF13 "Uncharacterized protei	0.944	0.420	0.400	1.5e-35
UNIPROTKB|Q9NV06	445	DCAF13 "DDB1- and CUL4-associa	0.944	0.420	0.400	1.5e-35
UNIPROTKB|Q5R4T8	445	DCAF13 "DDB1- and CUL4-associa	0.944	0.420	0.391	8.3e-35
MGI|MGI:2684929	445	Dcaf13 "DDB1 and CUL4 associat	0.944	0.420	0.391	1.7e-34

FB|FBgn0036500 CG7275 [Drosophila melanogaster (taxid:7227)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 91/198 (45%), Positives = 121/198 (61%)

Query:    12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLY 71
             DNKF  +   E+   +W    ++ L  ++  V +L +  +S+NP+E  +      D ++ 
Sbjct:   168 DNKF--ATCGEV-CAIWDERHNDPLKTLKWGVDTLHT--ISYNPVETSILACCASDRSII 222

Query:    72 SYDIRQLNSPLNVHKDMTS-------------AAANEDFNLYSYDIRQLNSPLNVHKDMT 118
              YD R+      V   M S               ANED NLY++D R+L +PL VH D  
Sbjct:   223 LYDQREAQPLRKVVLTMKSNKLAWNPMEAFNFTVANEDCNLYTFDTRKLQTPLKVHFDHV 282

Query:   119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVIS 178
             SAVT VDYSPTG+EFV+  YDK++R+Y AH  HSRDIYHTKRMQHV    WSLDN++V S
Sbjct:   283 SAVTDVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTKRMQHVVCVAWSLDNRYVFS 342

Query:   179 ASDEMNLRVWKAHASEKL 196
              SDEMN+R+WKA+ASEKL
Sbjct:   343 GSDEMNVRMWKANASEKL 360

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q7ZYQ6 dcaf13 "DDB1- and CUL4-associated factor 13" [Xenopus laevis (taxid:8355)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 86/198 (43%), Positives = 124/198 (62%)

Query:    14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFTAANEDFNLYS 72
             K  + A+    + +W    S    P+R     + S + V +NP+E  + ++   D ++  
Sbjct:   167 KDAVFATCGQQVDIWDEQRS---APMRSYAWGVDSISSVRFNPVETHILSSCGTDRSIVL 223

Query:    73 YDIRQLNSPLN-VHKDM-TSA------------AANEDFNLYSYDIRQLNSPLNVHKDMT 118
             YD R+  +PL  +  +M T+A            AANE+FNLY+YD+R ++SP+ VH D  
Sbjct:   224 YDKRK-PTPLKKIILEMRTNALCWNPMEAFIFTAANENFNLYTYDMRYMDSPVKVHMDHV 282

Query:   119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVIS 178
             SAV  VDYSPTG+E V+  +DKS+R++    GHSR++YHTKRMQHVT   WS DNK+V+ 
Sbjct:   283 SAVLDVDYSPTGKELVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLC 342

Query:   179 ASDEMNLRVWKAHASEKL 196
              SDEMN+R+WKA+ASEKL
Sbjct:   343 GSDEMNIRIWKANASEKL 360

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

UNIPROTKB|Q6NVS5 dcaf13 "DDB1- and CUL4-associated factor 13" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 83/195 (42%), Positives = 121/195 (62%)

Query:    17 ISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFTAANEDFNLYSYDI 75
             I A+    + +W    S    P+R     + S + + +NP+E  + ++   D ++  YD 
Sbjct:   170 IFATCGQQVDIWDEQRS---APMRSYAWGVDSISSIKFNPIETHILSSCGTDRSIVLYDK 226

Query:    76 RQLNSPLN-VHKDMTS-------------AAANEDFNLYSYDIRQLNSPLNVHKDMTSAV 121
             R+  +PL  +  +M +              AANE+FNLY+YD+R ++ P+ VH D  SAV
Sbjct:   227 RK-PTPLKKIILEMRTNTLCWNPMEAFIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAV 285

Query:   122 TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD 181
               VDYSPTG+EFV+  +DKS+R++    GHSR++YHTKRMQHVT   WS DNK+V+  SD
Sbjct:   286 LDVDYSPTGKEFVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSD 345

Query:   182 EMNLRVWKAHASEKL 196
             EMN+R+WKA+ASEKL
Sbjct:   346 EMNIRIWKANASEKL 360

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

UNIPROTKB|Q5ZLK1 DCAF13 "DDB1- and CUL4-associated factor 13" [Gallus gallus (taxid:9031)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 84/208 (40%), Positives = 131/208 (62%)

Query:     7 TVWS-LDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFT 62
             TV++ +D+  K  + A+    + +W     ++  P+  +     S + V +NP+E ++  
Sbjct:   157 TVYTGIDHHWKDAVFATCGQQVDIWD---EQRTSPMCSLTWGFDSISSVKFNPIETYLLG 213

Query:    63 AANEDFNLYSYDIRQLNSPLN-VHKDMTS-------------AAANEDFNLYSYDIRQLN 108
             +   D N+  YD+RQ ++PL  V  +M +              AANED+NLY++D+R L 
Sbjct:   214 SCASDRNIVLYDMRQ-STPLKKVILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRFLT 272

Query:   109 SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTV 168
             SP+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +GHSR++YHTKRMQHV    
Sbjct:   273 SPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVK 332

Query:   169 WSLDNKFVISASDEMNLRVWKAHASEKL 196
             W+ D+++++  SDEMN+R+WKA+ASEKL
Sbjct:   333 WTSDSRYILCGSDEMNIRLWKANASEKL 360

GO:0006364 "rRNA processing" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

UNIPROTKB|F1S1E1 DCAF13 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 84/207 (40%), Positives = 126/207 (60%)

Query:     7 TVWS-LDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFT 62
             TV++ +D+  K  I A+    + +W     ++  PI  +     S + V +NP+E F+  
Sbjct:   157 TVYTGIDHHWKEAIFATCGQQVDIWD---EQRTNPICSMTWGFDSISSVKFNPIETFLLG 213

Query:    63 AANEDFNLYSYDIRQLNSPLNVHKDMTS-------------AAANEDFNLYSYDIRQLNS 109
             +   D N+  YD+RQ      V  DM +              AANED+NLY++D+R L++
Sbjct:   214 SCASDRNIVLYDMRQATPLKKVILDMRTNTIGWNPMEAFIFTAANEDYNLYTFDMRALDT 273

Query:   110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 169
             P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YHTKRMQHV    W
Sbjct:   274 PVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKW 333

Query:   170 SLDNKFVISASDEMNLRVWKAHASEKL 196
             + D+K+++  SDEMN+R+WKA+ASEKL
Sbjct:   334 TSDSKYIMCGSDEMNIRLWKANASEKL 360

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IEA

ZFIN|ZDB-GENE-040426-703 dcaf13 "ddb1 and cul4 associated factor 13" [Danio rerio (taxid:7955)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 78/160 (48%), Positives = 107/160 (66%)

Query:    51 VSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-VHKDMTS-------------AAANED 96
             V +NP+E  +  +   D ++  YD R+ ++PL  V   + S               ANED
Sbjct:   202 VRYNPVEPDLLASCASDRSIVLYDTRE-SAPLRKVIMQLRSNTLCWNPMEAYYFTCANED 260

Query:    97 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156
             +NLY+YDIR L+ P+ VH D  SAV  VDYSPTGREFV+  +DK++R++   +GHSR++Y
Sbjct:   261 YNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTGREFVSASFDKTIRIFPKDKGHSREVY 320

Query:   157 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
             HTKRMQHV    WS D+KF++S SDEMN+R+WKA+ASEKL
Sbjct:   321 HTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKANASEKL 360

GO:0003674 "molecular_function" evidence=ND

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|F1P9T8 DCAF13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 83/207 (40%), Positives = 126/207 (60%)

Query:     7 TVWS-LDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFT 62
             TV++ +D+  K  + A+    + +W     ++  PI  +     S + V +NP+E F+  
Sbjct:   157 TVYTGIDHHWKEAVFATCGQQVDIWD---EQRTSPICSMTWGFDSISSVKFNPIETFLLG 213

Query:    63 AANEDFNLYSYDIRQLNSPLNVHKDMTS-------------AAANEDFNLYSYDIRQLNS 109
             +   D N+  YD+RQ      V  DM +              AANED+NLY++D+R L++
Sbjct:   214 SCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDT 273

Query:   110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 169
             P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YHTKRMQHV    W
Sbjct:   274 PVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKW 333

Query:   170 SLDNKFVISASDEMNLRVWKAHASEKL 196
             + D+K+++  SDEMN+R+WKA+ASEKL
Sbjct:   334 TSDSKYIMCGSDEMNIRLWKANASEKL 360

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IEA

UNIPROTKB|Q9NV06 DCAF13 "DDB1- and CUL4-associated factor 13" [Homo sapiens (taxid:9606)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 83/207 (40%), Positives = 126/207 (60%)

Query:     7 TVWS-LDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFT 62
             TV++ +D+  K  + A+    + +W     ++  PI  +     S + V +NP+E F+  
Sbjct:   157 TVYTGIDHHWKEAVFATCGQQVDIWD---EQRTNPICSMTWGFDSISSVKFNPIETFLLG 213

Query:    63 AANEDFNLYSYDIRQLNSPLNVHKDMTS-------------AAANEDFNLYSYDIRQLNS 109
             +   D N+  YD+RQ      V  DM +              AANED+NLY++D+R L++
Sbjct:   214 SCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDT 273

Query:   110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 169
             P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YHTKRMQHV    W
Sbjct:   274 PVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKW 333

Query:   170 SLDNKFVISASDEMNLRVWKAHASEKL 196
             + D+K+++  SDEMN+R+WKA+ASEKL
Sbjct:   334 TSDSKYIMCGSDEMNIRLWKANASEKL 360

GO:0006364 "rRNA processing" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA;IC

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IDA

UNIPROTKB|Q5R4T8 DCAF13 "DDB1- and CUL4-associated factor 13" [Pongo abelii (taxid:9601)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 81/207 (39%), Positives = 125/207 (60%)

Query:     7 TVWS-LDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFT 62
             TV++ +D+  K  + A+    + +W     ++  P+  +     S + V +NP+E F+  
Sbjct:   157 TVYTGIDHHWKEAVFATCGQQVDIWD---EQRTNPVCSMTWGFDSISSVKFNPIETFLLG 213

Query:    63 AANEDFNLYSYDIRQLNSPLNVHKDMTS-------------AAANEDFNLYSYDIRQLNS 109
             +   D N+  YD+RQ      V  DM +              AANED+NLY++D+  L++
Sbjct:   214 SCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMSALDT 273

Query:   110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 169
             P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YHTKRMQHV    W
Sbjct:   274 PVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKW 333

Query:   170 SLDNKFVISASDEMNLRVWKAHASEKL 196
             + D+K+++  SDEMN+R+WKA+ASEKL
Sbjct:   334 TSDSKYIMCGSDEMNIRLWKANASEKL 360

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

MGI|MGI:2684929 Dcaf13 "DDB1 and CUL4 associated factor 13" [Mus musculus (taxid:10090)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 81/207 (39%), Positives = 126/207 (60%)

Query:     7 TVWS-LDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFT 62
             TV++ +D+  K  + A+    + +W     ++  P+  +     S + V +NP+E F+  
Sbjct:   157 TVYTGIDHHWKDPVFATCGQQVDIWD---EQRTSPVCSMNWGFDSISSVKFNPVETFLLG 213

Query:    63 AANEDFNLYSYDIRQLNSPLNVHKDMTS-------------AAANEDFNLYSYDIRQLNS 109
             +   D N+  YD+RQ      V  +M +              AANED+NLY++D+R L++
Sbjct:   214 SCASDRNIVLYDMRQATPLKKVILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDT 273

Query:   110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 169
             P+ VH D  SAV  VDYSPTG+EFV+  +DKS+R++   +  SR++YHTKRMQHV    W
Sbjct:   274 PVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKW 333

Query:   170 SLDNKFVISASDEMNLRVWKAHASEKL 196
             + D+K+++  SDEMN+R+WKA+ASEKL
Sbjct:   334 TSDSKYIMCGSDEMNIRLWKANASEKL 360

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q803X4	DCA13_DANRE	No assigned EC number	0.5187	0.6616	0.2943	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	198
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	7e-13
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-08
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-08
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-06
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-05
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-04
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-04
smart00320	40	smart00320, WD40, WD40 repeats	5e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 65.0 bits (159), Expect = 7e-13
 Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 28/203 (13%)

Query: 4   VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR---KVVMSLRSNMVSWNPMEAFV 60
           V     S D  ++ S S +  +R+W     E +  +      V S     V+++P    +
Sbjct: 54  VRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSS-----VAFSPDG-RI 107

Query: 61  FTAANEDFNLYSYDIR--QLNSPLNVHKD-----------MTSAAANEDFNLYSYDIRQL 107
            ++++ D  +  +D+   +  + L  H D              A++++D  +  +D+R  
Sbjct: 108 LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTG 167

Query: 108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVT 165
              +      T  V SV +SP G + ++   D +++L+    G        H      V 
Sbjct: 168 -KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG---VN 223

Query: 166 HTVWSLDNKFVISASDEMNLRVW 188
              +S D   + S S++  +RVW
Sbjct: 224 SVAFSPDGYLLASGSEDGTIRVW 246

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 52.0 bits (123), Expect = 3e-08
 Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 24/214 (11%)

Query: 2   QHVTHTVWSLDNKFVISASDE-MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFV 60
           + VT   +S D K + S S     +++W     + L  +      + S  ++++P    +
Sbjct: 156 ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSS--LAFSPDGGLL 213

Query: 61  FTAANEDFNLYSYDIRQ---LNSPLNVHKDMTS----------AAANEDFNLYSYDIRQL 107
             + + D  +  +D+     L S L+ H D             A+ + D  +  +D+R  
Sbjct: 214 IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSS 273

Query: 108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT 167
           +S L      +S+V SV +SP G+   +G  D ++RL+    G    +  +  ++     
Sbjct: 274 SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETG---KLLSSLTLKGHEGP 330

Query: 168 VWSLD-----NKFVISASDEMNLRVWKAHASEKL 196
           V SL      +  V   SD+  +R+W     + L
Sbjct: 331 VSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPL 364

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 43/212 (20%), Positives = 84/212 (39%), Gaps = 42/212 (19%)

Query: 5   THTVWSL----DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-----NMVSWNP 55
           T  V S+    D + + S+S +  ++VW            K + +LR      N V+++P
Sbjct: 93  TSYVSSVAFSPDGRILSSSSRDKTIKVWDV-------ETGKCLTTLRGHTDWVNSVAFSP 145

Query: 56  MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS--------------AAANEDFNLYS 101
              FV +++  D  +  +D+R     +      T                +++ D  +  
Sbjct: 146 DGTFVASSSQ-DGTIKLWDLRTG-KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKL 203

Query: 102 YDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM 161
           +D+      L   +   + V SV +SP G    +G  D ++R++       R     + +
Sbjct: 204 WDLSTG-KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW-----DLRTGECVQTL 257

Query: 162 QHVTHTVWSL----DNKFVISASDEMNLRVWK 189
              T++V SL    D K + S S +  +R+W 
Sbjct: 258 SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 29/161 (18%)

Query: 4   VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-----NMVSWNPMEA 58
           V    +S D  FV S+S +  +++W            K V +L       N V+++P   
Sbjct: 138 VNSVAFSPDGTFVASSSQDGTIKLWDLRTG-------KCVATLTGHTGEVNSVAFSPDGE 190

Query: 59  FVFTAANEDF-NLYSYDIRQLNSPLNVHKD-----------MTSAAANEDFNLYSYDIR- 105
            + +++++    L+     +    L  H++              A+ +ED  +  +D+R 
Sbjct: 191 KLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT 250

Query: 106 -QLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145
            +    L+ H   T++VTS+ +SP G+   +G  D ++R++
Sbjct: 251 GECVQTLSGH---TNSVTSLAWSPDGKRLASGSADGTIRIW 288

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 46.6 bits (109), Expect = 3e-06
 Identities = 38/201 (18%), Positives = 75/201 (37%), Gaps = 21/201 (10%)

Query: 7   TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE 66
           + +S D   + S S +  +R+W   +S  L        S     V+++P    + + ++ 
Sbjct: 247 SSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSG-HSSSVLSVAFSPDGKLLASGSS- 304

Query: 67  DFNLYSYDIRQLNSP----------------LNVHKDMTSAAANEDFNLYSYDIRQLNSP 110
           D  +  +D+                       +    +  +  ++D  +  +D+R     
Sbjct: 305 DGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPL 364

Query: 111 LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS 170
             +     S V SV +SP GR   +G  D ++RL+    G           + VT   +S
Sbjct: 365 KTLEGH--SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSR-VTSLDFS 421

Query: 171 LDNKFVISASDEMNLRVWKAH 191
            D K + S S +  +R+W   
Sbjct: 422 PDGKSLASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 42/204 (20%), Positives = 82/204 (40%), Gaps = 40/204 (19%)

Query: 9   WSLDNKFVISASDEMNLRVWKAHASEKL-------GPIRKVVMSLRSNMVSWNPMEAFVF 61
           +S D K + + S +  ++VW     E L       GP+R V  S             ++ 
Sbjct: 17  FSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGT---------YLA 67

Query: 62  TAANEDF-NLYSYDIRQLNSPLNVHKDMTS-----------AAANEDFNLYSYDIR--QL 107
           + +++    L+  +  +    L  H    S           ++++ D  +  +D+   + 
Sbjct: 68  SGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKC 127

Query: 108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRDIY--HTKRMQHV 164
            + L  H D    V SV +SP G  FVA    D +++L+    G        HT  +  V
Sbjct: 128 LTTLRGHTD---WVNSVAFSPDGT-FVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSV 183

Query: 165 THTVWSLDNKFVISASDEMNLRVW 188
               +S D + ++S+S +  +++W
Sbjct: 184 A---FSPDGEKLLSSSSDGTIKLW 204

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH---VTHTVWSLDNK 174
           T  VT V +SP G+    G  D +++++    G            H   V     S D  
Sbjct: 9   TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE----LLRTLKGHTGPVRDVAASADGT 64

Query: 175 FVISASDEMNLRVWKAHASEKL 196
           ++ S S +  +R+W     E +
Sbjct: 65  YLASGSSDKTIRLWDLETGECV 86

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 30/156 (19%), Positives = 65/156 (41%), Gaps = 13/156 (8%)

Query: 2   QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVF 61
             V    +S D K + S S +  +R+W     + L  +         + +S++P  + + 
Sbjct: 285 SSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLV 344

Query: 62  TAANEDFNLYSYDIRQLNSPLNVH------------KDMTSAAANEDFNLYSYDIRQLNS 109
           +  ++D  +  +D+R       +                  ++ + D  +  +D+   + 
Sbjct: 345 SGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSL 404

Query: 110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145
             N+    TS VTS+D+SP G+   +G  D ++RL+
Sbjct: 405 LRNLDG-HTSRVTSLDFSPDGKSLASGSSDNTIRLW 439

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 109 SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145
             L   K  T  VTSV +SP G+   +G  D +++L+
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 109 SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145
             L   K  T  VTSV +SP G    +G  D ++R++
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 69  NLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP 128
            L+   + +L         +  A+++ D  +  +D+      +   +  + +VTS+ +SP
Sbjct: 106 GLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSP 165

Query: 129 TGREFVAGG-YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLR 186
            G+   +G   D +++L+    G             V+   +S D   +I S S +  +R
Sbjct: 166 DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHT-DPVSSLAFSPDGGLLIASGSSDGTIR 224

Query: 187 VWKAHASEKL 196
           +W     + L
Sbjct: 225 LWDLSTGKLL 234

Length = 466

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
KOG0271|consensus	480		100.0
KOG0286|consensus	343		100.0
KOG0272|consensus	459		100.0
KOG0263|consensus	707		100.0
KOG0272|consensus	459		100.0
KOG0315|consensus	311		100.0
KOG0279|consensus	315		100.0
KOG0273|consensus	524		100.0
KOG0263|consensus	707		100.0
KOG0271|consensus	480		100.0
KOG0266|consensus	456		100.0
KOG0284|consensus	464		100.0
KOG0285|consensus	460		100.0
KOG0286|consensus	343		100.0
KOG0265|consensus	338		100.0
KOG0291|consensus	893		100.0
KOG0295|consensus	406		100.0
KOG0284|consensus	464		100.0
KOG0318|consensus	603		99.98
KOG0266|consensus	456		99.98
KOG0318|consensus	603		99.98
KOG0279|consensus	315		99.98
KOG0277|consensus	311		99.97
KOG0315|consensus	311		99.97
KOG0645|consensus	312		99.97
KOG0273|consensus	524		99.97
KOG1407|consensus	313		99.97
KOG0276|consensus	794		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0295|consensus	406		99.97
KOG0265|consensus	338		99.97
KOG0319|consensus	775		99.97
KOG0316|consensus	307		99.97
KOG0282|consensus	503		99.97
KOG0282|consensus	503		99.97
KOG0277|consensus	311		99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG0278|consensus	334		99.97
KOG0296|consensus	399		99.97
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.97
KOG0281|consensus	499		99.97
KOG0264|consensus	422		99.97
KOG0269|consensus	839		99.97
KOG0645|consensus	312		99.97
KOG0643|consensus	327		99.97
KOG0275|consensus	508		99.96
KOG1446|consensus	311		99.96
KOG0640|consensus	430		99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
PTZ00420	568	coronin; Provisional	99.96
KOG0276|consensus	794		99.96
KOG0291|consensus	893		99.96
KOG0310|consensus	487		99.96
KOG0292|consensus	1202		99.96
KOG0305|consensus	484		99.96
KOG0319|consensus	775		99.96
KOG0641|consensus	350		99.96
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.96
KOG4283|consensus	397		99.96
KOG0316|consensus	307		99.96
KOG0772|consensus	641		99.95
KOG0292|consensus	1202		99.95
KOG0293|consensus	519		99.95
KOG0288|consensus	459		99.95
KOG0264|consensus	422		99.95
KOG0268|consensus	433		99.95
KOG0281|consensus	499		99.95
KOG0285|consensus	460		99.95
KOG0646|consensus	476		99.95
PTZ00421	493	coronin; Provisional	99.95
KOG0296|consensus	399		99.95
KOG2096|consensus	420		99.95
KOG0643|consensus	327		99.95
PTZ00420	568	coronin; Provisional	99.95
KOG0283|consensus	712		99.94
KOG0647|consensus	347		99.94
KOG0299|consensus	479		99.94
KOG0313|consensus	423		99.94
KOG0640|consensus	430		99.94
KOG0310|consensus	487		99.94
KOG0313|consensus	423		99.94
KOG0274|consensus	537		99.94
KOG0289|consensus	506		99.93
KOG0305|consensus	484		99.93
KOG0306|consensus	888		99.93
KOG0973|consensus	942		99.93
KOG1539|consensus	910		99.93
KOG0302|consensus	440		99.93
KOG0308|consensus	735		99.93
KOG0308|consensus	735		99.93
KOG0274|consensus	537		99.93
KOG4328|consensus	498		99.93
KOG0270|consensus	463		99.93
KOG0289|consensus	506		99.93
KOG1332|consensus	299		99.92
KOG0307|consensus	1049		99.92
KOG0293|consensus	519		99.92
KOG0641|consensus	350		99.92
KOG0306|consensus	888		99.92
KOG0268|consensus	433		99.92
KOG0267|consensus	825		99.92
KOG0283|consensus	712		99.92
KOG0299|consensus	479		99.92
KOG0275|consensus	508		99.92
KOG1332|consensus	299		99.92
KOG0300|consensus	481		99.91
KOG1036|consensus	323		99.91
KOG2445|consensus	361		99.91
KOG0973|consensus	942		99.91
KOG1408|consensus	1080		99.91
KOG0269|consensus	839		99.91
KOG1007|consensus	370		99.91
KOG0771|consensus	398		99.91
KOG1407|consensus	313		99.9
KOG0301|consensus	745		99.9
KOG0639|consensus	705		99.9
KOG2055|consensus	514		99.9
KOG0307|consensus	1049		99.9
KOG0288|consensus	459		99.9
KOG0772|consensus	641		99.9
KOG0647|consensus	347		99.9
KOG1446|consensus	311		99.89
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG1274|consensus	933		99.89
KOG0302|consensus	440		99.89
KOG0294|consensus	362		99.89
KOG1273|consensus	405		99.89
KOG0321|consensus	720		99.88
KOG1539|consensus	910		99.88
KOG0294|consensus	362		99.88
KOG0278|consensus	334		99.88
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.87
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.87
KOG2055|consensus	514		99.87
KOG0639|consensus	705		99.87
KOG0300|consensus	481		99.87
KOG0270|consensus	463		99.87
KOG2048|consensus	691		99.86
KOG0303|consensus	472		99.86
KOG1007|consensus	370		99.86
KOG4378|consensus	673		99.86
KOG0301|consensus	745		99.86
KOG2919|consensus	406		99.86
KOG1034|consensus	385		99.86
KOG2106|consensus	626		99.85
KOG2110|consensus	391		99.85
KOG1036|consensus	323		99.85
KOG0303|consensus	472		99.85
KOG0646|consensus	476		99.84
KOG0267|consensus	825		99.84
KOG0290|consensus	364		99.84
KOG0650|consensus	733		99.84
KOG1063|consensus	764		99.84
KOG1408|consensus	1080		99.84
KOG4328|consensus	498		99.83
KOG3881|consensus	412		99.83
KOG1273|consensus	405		99.83
KOG0322|consensus	323		99.83
KOG2048|consensus	691		99.83
KOG1188|consensus	376		99.83
KOG2096|consensus	420		99.82
KOG0649|consensus	325		99.82
KOG1009|consensus	434		99.82
KOG0290|consensus	364		99.82
KOG1274|consensus	933		99.82
KOG2394|consensus	636		99.81
KOG0642|consensus	577		99.81
KOG1445|consensus	1012		99.81
KOG1445|consensus	1012		99.81
KOG1310|consensus	758		99.8
KOG2106|consensus	626		99.8
KOG1523|consensus	361		99.8
KOG4283|consensus	397		99.79
KOG1524|consensus	737		99.79
KOG1034|consensus	385		99.79
PRK11028	330	6-phosphogluconolactonase; Provisional	99.79
KOG4378|consensus	673		99.79
KOG1587|consensus	555		99.79
KOG2394|consensus	636		99.78
KOG0321|consensus	720		99.78
KOG1063|consensus	764		99.77
KOG2111|consensus	346		99.77
PRK01742	429	tolB translocation protein TolB; Provisional	99.77
PRK11028	330	6-phosphogluconolactonase; Provisional	99.77
KOG2919|consensus	406		99.77
KOG1272|consensus	545		99.75
PRK03629	429	tolB translocation protein TolB; Provisional	99.74
COG2319	466	FOG: WD40 repeat [General function prediction only	99.73
KOG1009|consensus	434		99.73
PRK02889	427	tolB translocation protein TolB; Provisional	99.72
KOG1272|consensus	545		99.72
PRK05137	435	tolB translocation protein TolB; Provisional	99.72
KOG1538|consensus	1081		99.71
PRK04922	433	tolB translocation protein TolB; Provisional	99.7
COG2319	466	FOG: WD40 repeat [General function prediction only	99.7
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.69
KOG2445|consensus	361		99.68
KOG1587|consensus	555		99.68
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.68
KOG1240|consensus	1431		99.67
KOG1188|consensus	376		99.67
KOG0644|consensus	1113		99.67
KOG1523|consensus	361		99.67
KOG1517|consensus	1387		99.65
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.65
KOG2139|consensus	445		99.65
KOG2321|consensus	703		99.64
KOG2110|consensus	391		99.64
KOG1517|consensus	1387		99.63
KOG0322|consensus	323		99.62
KOG0644|consensus	1113		99.62
PRK01742	429	tolB translocation protein TolB; Provisional	99.62
KOG1963|consensus	792		99.61
KOG0649|consensus	325		99.61
PRK00178	430	tolB translocation protein TolB; Provisional	99.61
KOG0642|consensus	577		99.61
KOG3914|consensus	390		99.6
KOG4227|consensus	609		99.6
KOG2139|consensus	445		99.6
PRK04792	448	tolB translocation protein TolB; Provisional	99.6
PRK01029	428	tolB translocation protein TolB; Provisional	99.59
KOG4227|consensus	609		99.58
KOG1524|consensus	737		99.58
KOG1354|consensus	433		99.58
KOG1963|consensus	792		99.55
KOG4497|consensus	447		99.55
PRK02889	427	tolB translocation protein TolB; Provisional	99.54
PRK05137	435	tolB translocation protein TolB; Provisional	99.53
PRK03629	429	tolB translocation protein TolB; Provisional	99.53
PRK04922	433	tolB translocation protein TolB; Provisional	99.53
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.52
KOG2321|consensus	703		99.52
KOG0771|consensus	398		99.52
KOG1064|consensus	2439		99.52
KOG4547|consensus	541		99.52
KOG1334|consensus	559		99.5
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.5
KOG0974|consensus	967		99.46
PRK01029	428	tolB translocation protein TolB; Provisional	99.46
KOG4497|consensus	447		99.45
KOG2315|consensus	566		99.45
KOG0280|consensus	339		99.45
KOG1310|consensus	758		99.42
KOG3881|consensus	412		99.42
KOG0974|consensus	967		99.41
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.41
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.4
KOG1409|consensus	404		99.4
KOG0650|consensus	733		99.39
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.39
PRK00178	430	tolB translocation protein TolB; Provisional	99.39
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.38
KOG1538|consensus	1081		99.37
PRK04043	419	tolB translocation protein TolB; Provisional	99.37
PRK04792	448	tolB translocation protein TolB; Provisional	99.35
COG4946	668	Uncharacterized protein related to the periplasmic	99.34
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.3
KOG1354|consensus	433		99.3
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.27
KOG0280|consensus	339		99.26
KOG4547|consensus	541		99.25
KOG2111|consensus	346		99.25
KOG0309|consensus	1081		99.24
KOG1240|consensus	1431		99.22
KOG4532|consensus	344		99.21
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.21
KOG4714|consensus	319		99.18
KOG1334|consensus	559		99.18
COG4946	668	Uncharacterized protein related to the periplasmic	99.17
KOG2314|consensus	698		99.17
KOG2695|consensus	425		99.16
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.16
PRK04043	419	tolB translocation protein TolB; Provisional	99.15
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.15
KOG4532|consensus	344		99.12
KOG0309|consensus	1081		99.12
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.11
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.11
KOG1409|consensus	404		99.1
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.08
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	99.06
KOG2315|consensus	566		99.03
KOG0882|consensus	558		99.0
KOG2695|consensus	425		98.99
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.98
KOG4190|consensus	1034		98.98
KOG4714|consensus	319		98.97
KOG1832|consensus	1516		98.97
KOG1064|consensus	2439		98.96
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.93
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.92
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.9
KOG2041|consensus	1189		98.89
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.89
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.89
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.88
KOG3914|consensus	390		98.88
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.82
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.81
PRK02888	635	nitrous-oxide reductase; Validated	98.81
KOG2041|consensus	1189		98.79
KOG2066|consensus	846		98.75
KOG2066|consensus	846		98.72
KOG1275|consensus	1118		98.71
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.71
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.71
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.68
KOG2114|consensus	933		98.66
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.66
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.63
KOG0882|consensus	558		98.61
KOG1912|consensus	1062		98.6
PRK13616	591	lipoprotein LpqB; Provisional	98.58
KOG1008|consensus	783		98.57
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.56
KOG1645|consensus	463		98.51
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.5
KOG1912|consensus	1062		98.49
PRK02888	635	nitrous-oxide reductase; Validated	98.48
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.48
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.45
KOG1920|consensus	1265		98.45
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.41
KOG1645|consensus	463		98.4
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.39
KOG4190|consensus	1034		98.38
KOG3621|consensus	726		98.37
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.35
KOG1008|consensus	783		98.34
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.33
KOG4640|consensus	665		98.29
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.29
COG3391	381	Uncharacterized conserved protein [Function unknow	98.29
KOG4640|consensus	665		98.27
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.21
COG3391	381	Uncharacterized conserved protein [Function unknow	98.2
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.19
KOG3617|consensus	1416		98.19
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.18
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.18
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.17
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.16
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.15
KOG2314|consensus	698		98.1
KOG3621|consensus	726		98.05
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.01
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.0
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.97
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.92
KOG3617|consensus	1416		97.9
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.87
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.87
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.84
KOG1920|consensus	1265		97.84
KOG4649|consensus	354		97.84
KOG2079|consensus	1206		97.83
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.81
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.77
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.75
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.73
PRK13616	591	lipoprotein LpqB; Provisional	97.73
KOG2114|consensus	933		97.71
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.65
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.64
KOG1275|consensus	1118		97.62
KOG4649|consensus	354		97.61
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.6
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.59
KOG2079|consensus	1206		97.58
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.58
KOG2395|consensus	644		97.54
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.52
PHA02713	557	hypothetical protein; Provisional	97.52
KOG2444|consensus	238		97.46
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.38
KOG1832|consensus	1516		97.37
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.31
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.29
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.26
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	97.22
KOG4499|consensus	310		97.18
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.16
KOG4441|consensus	571		97.13
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.05
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.04
PHA03098	534	kelch-like protein; Provisional	97.0
KOG2444|consensus	238		96.99
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	96.98
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.94
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.94
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	96.94
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.9
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.89
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.88
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.83
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.83
KOG4441|consensus	571		96.81
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.76
KOG3630|consensus	1405		96.76
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.7
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.67
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.64
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.54
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.44
KOG2247|consensus	615		96.39
PHA02713	557	hypothetical protein; Provisional	96.37
PRK10115	686	protease 2; Provisional	96.29
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	96.19
KOG1897|consensus	1096		96.1
KOG2377|consensus	657		95.98
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	95.96
COG5167	776	VID27 Protein involved in vacuole import and degra	95.75
KOG2377|consensus	657		95.66
KOG4460|consensus	741		95.62
PRK10115	686	protease 2; Provisional	95.61
KOG1900|consensus	1311		95.48
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	95.44
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	95.41
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	95.41
KOG1916|consensus	1283		95.4
KOG2395|consensus	644		95.36
KOG4499|consensus	310		95.33
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	95.32
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.3
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	95.28
PHA02790	480	Kelch-like protein; Provisional	95.26
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.2
KOG2280|consensus	829		95.19
KOG3630|consensus	1405		95.16
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	95.14
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	95.05
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	94.99
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	94.94
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	94.83
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	94.82
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.76
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	94.64
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	94.45
KOG1916|consensus	1283		94.32
PF14727	418	PHTB1_N: PTHB1 N-terminus	94.23
COG5276	370	Uncharacterized conserved protein [Function unknow	94.13
PHA03098	534	kelch-like protein; Provisional	94.12
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	94.04
KOG4460|consensus	741		94.01
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	93.92
PRK13684	334	Ycf48-like protein; Provisional	93.79
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	93.79
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	93.71
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	93.61
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	93.58
PLN00033	398	photosystem II stability/assembly factor; Provisio	93.41
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	92.62
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	92.2
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	92.1
COG4590	733	ABC-type uncharacterized transport system, permeas	91.75
KOG1983|consensus	993		91.15
COG5167	776	VID27 Protein involved in vacuole import and degra	90.99
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	90.96
COG4590	733	ABC-type uncharacterized transport system, permeas	90.78
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	90.13
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	89.81
PF05787	524	DUF839: Bacterial protein of unknown function (DUF	89.79
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	89.69
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	89.56
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	89.47
PF01731	86	Arylesterase: Arylesterase; InterPro: IPR002640 Th	89.33
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	89.32
PF14727	418	PHTB1_N: PTHB1 N-terminus	89.23
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	89.08
COG5276	370	Uncharacterized conserved protein [Function unknow	88.8
COG1520	370	FOG: WD40-like repeat [Function unknown]	88.75
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	88.68
PF12768	281	Rax2: Cortical protein marker for cell polarity	88.35
COG4880	603	Secreted protein containing C-terminal beta-propel	88.16
KOG2280|consensus	829		88.02
KOG1520|consensus	376		87.82
COG5308	1263	NUP170 Nuclear pore complex subunit [Intracellular	87.78
PF13449	326	Phytase-like: Esterase-like activity of phytase	87.7
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	87.68
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	87.65
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	87.65
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	87.46
COG1770	682	PtrB Protease II [Amino acid transport and metabol	87.24
PF13449	326	Phytase-like: Esterase-like activity of phytase	87.03
KOG1897|consensus	1096		86.75
PLN02193	470	nitrile-specifier protein	86.71
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	86.54
KOG1898|consensus	1205		86.22
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	86.05
PLN02153	341	epithiospecifier protein	85.49
PF12768	281	Rax2: Cortical protein marker for cell polarity	85.44
TIGR03054	135	photo_alph_chp1 putative photosynthetic complex as	85.26
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	84.85
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	84.62
KOG3522|consensus	925		84.15
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	83.85
KOG1520|consensus	376		83.76
PHA02790	480	Kelch-like protein; Provisional	83.67
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	83.38
PF01731	86	Arylesterase: Arylesterase; InterPro: IPR002640 Th	82.59

>KOG0271|consensus

Probab=100.00  E-value=3.5e-39  Score=221.53  Aligned_cols=190  Identities=20%  Similarity=0.392  Sum_probs=163.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|.|++|+|+|+.|++|+.|.++|+||+.+.....+.+.  |...|.+++|+||++.|++ |+.||+|++||..+... 
T Consensus       116 e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~Kg--H~~WVlcvawsPDgk~iAS-G~~dg~I~lwdpktg~~~  192 (480)
T KOG0271|consen  116 EAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKG--HKNWVLCVAWSPDGKKIAS-GSKDGSIRLWDPKTGQQI  192 (480)
T ss_pred             CcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecC--CccEEEEEEECCCcchhhc-cccCCeEEEecCCCCCcc
Confidence            6799999999999999999999999999998876666655  5788999999999999876 67999999999765432 


Q ss_pred             --ccccccC-----------------------------------------------------------------------
Q psy8758          81 --PLNVHKD-----------------------------------------------------------------------   87 (198)
Q Consensus        81 --~~~~~~~-----------------------------------------------------------------------   87 (198)
                        .+.+|..                                                                       
T Consensus       193 g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkv  272 (480)
T KOG0271|consen  193 GRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKV  272 (480)
T ss_pred             cccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEE
Confidence              2222211                                                                       


Q ss_pred             ----------------------------------------------------------------ceEEEecCCCcEEEEE
Q psy8758          88 ----------------------------------------------------------------MTSAAANEDFNLYSYD  103 (198)
Q Consensus        88 ----------------------------------------------------------------~~~~~~~~~~~i~~~d  103 (198)
                                                                                      ..+++|++|.++.+|+
T Consensus       273 w~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~  352 (480)
T KOG0271|consen  273 WRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWN  352 (480)
T ss_pred             EEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEec
Confidence                                                                            0167777777777777


Q ss_pred             ccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         104 IRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       104 ~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                      .....+++....+|+..|+.+.||||++++|+++.|..|++||.++|+.+..+ .+|-+.|+.++|+.|.++|++|+.|.
T Consensus       353 p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasf-RGHv~~VYqvawsaDsRLlVS~SkDs  431 (480)
T KOG0271|consen  353 PFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASF-RGHVAAVYQVAWSADSRLLVSGSKDS  431 (480)
T ss_pred             ccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhh-hhccceeEEEEeccCccEEEEcCCCc
Confidence            76656788888999999999999999999999999999999999999999988 78999999999999999999999999


Q ss_pred             eEEEEecCCCcc
Q psy8758         184 NLRVWKAHASEK  195 (198)
Q Consensus       184 ~v~~w~~~~~~~  195 (198)
                      ++++|++++.+.
T Consensus       432 TLKvw~V~tkKl  443 (480)
T KOG0271|consen  432 TLKVWDVRTKKL  443 (480)
T ss_pred             eEEEEEeeeeee
Confidence            999999998765

>KOG0286|consensus

Probab=100.00  E-value=1.8e-35  Score=196.84  Aligned_cols=190  Identities=23%  Similarity=0.354  Sum_probs=169.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      +.|.++.|++|++++++++.||.+.|||..+......+...  ...|..++|+|.++.++. |+.|+.+.+|++....  
T Consensus        56 ~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~--s~WVMtCA~sPSg~~VAc-GGLdN~Csiy~ls~~d~~  132 (343)
T KOG0286|consen   56 NKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLP--SSWVMTCAYSPSGNFVAC-GGLDNKCSIYPLSTRDAE  132 (343)
T ss_pred             cceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecC--ceeEEEEEECCCCCeEEe-cCcCceeEEEeccccccc
Confidence            57999999999999999999999999999887765555443  678999999999998865 6799999999997442  


Q ss_pred             ------CccccccC----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcE
Q psy8758          80 ------SPLNVHKD----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSL  142 (198)
Q Consensus        80 ------~~~~~~~~----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v  142 (198)
                            +.+.+|.+          ..+++++.|.++.+||+++ ++.+..+.+|.+.|.+++++| +++.+++|+.|+..
T Consensus       133 g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~-g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~a  211 (343)
T KOG0286|consen  133 GNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIET-GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSA  211 (343)
T ss_pred             ccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEccc-ceEEEEecCCcccEEEEecCCCCCCeEEecccccce
Confidence                  33556655          3589999999999999999 899999999999999999999 89999999999999


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++||++.+.+.+.+ .+|...|++++|.|+|.-+++|++|+++++||++..+.+
T Consensus       212 klWD~R~~~c~qtF-~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~  264 (343)
T KOG0286|consen  212 KLWDVRSGQCVQTF-EGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL  264 (343)
T ss_pred             eeeeccCcceeEee-cccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE
Confidence            99999999999988 799999999999999999999999999999999987665

>KOG0272|consensus

Probab=100.00  E-value=8.5e-37  Score=211.71  Aligned_cols=192  Identities=18%  Similarity=0.288  Sum_probs=167.4

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .++|..+.||++++.|+||+.+|.+++|+..+......+..  |...+.++.|+|. ...-+++++.||++++|++.+..
T Consensus       175 ~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~g--H~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~  252 (459)
T KOG0272|consen  175 TRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRG--HTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET  252 (459)
T ss_pred             CCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEec--cccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence            36899999999999999999999999999988876666665  5788999999998 34344456899999999997633


Q ss_pred             --Cccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          80 --SPLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 --~~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                        ..+.+|           .+.++.+++.|.+-++||+++ +..+...++|...|.+++|.|||.++++|+.|..-+|||
T Consensus       253 ~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~t-k~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWD  331 (459)
T KOG0272|consen  253 PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLET-KSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWD  331 (459)
T ss_pred             chhhhhcchhhheeeeecCCCceeeecccccchhhccccc-chhhHhhcccccccceeEecCCCceeeccCccchhheee
Confidence              233333           345799999999999999999 677788899999999999999999999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++++.++-.+ .+|..+|.+++|+|+|..||||+.|++++|||++-.+++
T Consensus       332 lRtgr~im~L-~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~l  380 (459)
T KOG0272|consen  332 LRTGRCIMFL-AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSEL  380 (459)
T ss_pred             cccCcEEEEe-cccccceeeEeECCCceEEeecCCCCcEEEeeecccccc
Confidence            9999998877 689999999999999999999999999999999866553

>KOG0263|consensus

Probab=100.00  E-value=2.9e-36  Score=222.55  Aligned_cols=188  Identities=17%  Similarity=0.273  Sum_probs=167.8

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      .++|..+.|+|+.++|+++++|+++|+|.+.+..+...++.  |..+|..+.|+|.|-++++ ++.|++.++|...... 
T Consensus       451 ~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~G--H~~PVwdV~F~P~GyYFat-as~D~tArLWs~d~~~P  527 (707)
T KOG0263|consen  451 SGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKG--HLAPVWDVQFAPRGYYFAT-ASHDQTARLWSTDHNKP  527 (707)
T ss_pred             CCceeeeeecccccceeeccCCcceeeeecccceeEEEecC--CCcceeeEEecCCceEEEe-cCCCceeeeeecccCCc
Confidence            37999999999999999999999999999999887777764  5888999999999887766 5899999999886533 


Q ss_pred             -Cccc----------cccC-ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          80 -SPLN----------VHKD-MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        80 -~~~~----------~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                       +.+.          .|++ .++++|+.|.++++||..+ +..++.+.+|.++|.+++|||+|++|++|+.|+.|.+||+
T Consensus       528 lRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~-G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl  606 (707)
T KOG0263|consen  528 LRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST-GNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDL  606 (707)
T ss_pred             hhhhcccccccceEEECCcccccccCCCCceEEEEEcCC-CcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEc
Confidence             2333          3333 5799999999999999999 7889999999999999999999999999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ..++.+..+ .+|.+.|.++.||.||..||+++.|++|++||+..-
T Consensus       607 ~~~~~v~~l-~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  607 ANGSLVKQL-KGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV  651 (707)
T ss_pred             CCCcchhhh-hcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence            999998887 688999999999999999999999999999998643

>KOG0272|consensus

Probab=100.00  E-value=7.3e-37  Score=212.03  Aligned_cols=191  Identities=18%  Similarity=0.259  Sum_probs=169.0

Q ss_pred             cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|.++.|+|.  +..+|+++.||++++|++++...+..+..  |..+|..++|+|+|++|.++ +.|.+-++||+++..
T Consensus       218 ~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~g--H~~RVs~VafHPsG~~L~Ta-sfD~tWRlWD~~tk~  294 (459)
T KOG0272|consen  218 SRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEG--HLARVSRVAFHPSGKFLGTA-SFDSTWRLWDLETKS  294 (459)
T ss_pred             cceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhc--chhhheeeeecCCCceeeec-ccccchhhcccccch
Confidence            56889999996  56999999999999999987776666665  46789999999999999875 799999999999766


Q ss_pred             Cc--ccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          80 SP--LNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 ~~--~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      ..  .++|.           +.++++|+.|..-++||+++ +..+..+.+|..+|.+++|+|+|-.||||+.|++++|||
T Consensus       295 ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRt-gr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWD  373 (459)
T KOG0272|consen  295 ELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRT-GRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWD  373 (459)
T ss_pred             hhHhhcccccccceeEecCCCceeeccCccchhheeeccc-CcEEEEecccccceeeEeECCCceEEeecCCCCcEEEee
Confidence            43  23333           34688999999999999999 889999999999999999999999999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ++....+..+ .+|..-|+.+.|+| .|.+|+|++.|+++++|...+..+++
T Consensus       374 LR~r~~ly~i-pAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~k  424 (459)
T KOG0272|consen  374 LRMRSELYTI-PAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLK  424 (459)
T ss_pred             ecccccceec-ccccchhhheEecccCCeEEEEcccCcceeeecCCCcccch
Confidence            9999988877 89999999999999 78899999999999999999888764

>KOG0315|consensus

Probab=100.00  E-value=4.2e-35  Score=191.31  Aligned_cols=191  Identities=17%  Similarity=0.293  Sum_probs=160.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|+++.|..+|+++++|++||+++|||+....+.+   .+.+..+|+++..+|+...|++ |..+|.|++||+..... 
T Consensus        84 kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR---~~~~~spVn~vvlhpnQteLis-~dqsg~irvWDl~~~~c~  159 (311)
T KOG0315|consen   84 KNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQR---NYQHNSPVNTVVLHPNQTELIS-GDQSGNIRVWDLGENSCT  159 (311)
T ss_pred             CceEEEEEeecCeEEEecCCCceEEEEeccCcccch---hccCCCCcceEEecCCcceEEe-ecCCCcEEEEEccCCccc
Confidence            568999999999999999999999999998754433   3345789999999999888876 58999999999986431 


Q ss_pred             ------------cccc-ccCceEEEecCCCcEEEEEccCC-----CcceeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          81 ------------PLNV-HKDMTSAAANEDFNLYSYDIRQL-----NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        81 ------------~~~~-~~~~~~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                                  .+.. ..+..++.+...|.+++|++-..     -.|+..+..|...+..+.+|||+++|++++.|.++
T Consensus       160 ~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv  239 (311)
T KOG0315|consen  160 HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTV  239 (311)
T ss_pred             cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceE
Confidence                        1111 23456888888999999998641     25667788899999999999999999999999999


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+....-.......+|...++..+||.||+||++++.|+.+++|++..++.+
T Consensus       240 ~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v  293 (311)
T KOG0315|consen  240 KIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEV  293 (311)
T ss_pred             EEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCcee
Confidence            999999873333344788899999999999999999999999999999999865

>KOG0279|consensus

Probab=100.00  E-value=3e-35  Score=194.57  Aligned_cols=187  Identities=17%  Similarity=0.250  Sum_probs=160.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC---
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN---   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~---   79 (198)
                      .|..+..++||++.++++.|+.+++||+.+++..+.+..  |...|.+++|+||++.+++ |+.|.+|++|++....   
T Consensus        65 ~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~G--H~~dVlsva~s~dn~qivS-GSrDkTiklwnt~g~ck~t  141 (315)
T KOG0279|consen   65 FVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVG--HTKDVLSVAFSTDNRQIVS-GSRDKTIKLWNTLGVCKYT  141 (315)
T ss_pred             EecceEEccCCceEEeccccceEEEEEecCCcEEEEEEe--cCCceEEEEecCCCceeec-CCCcceeeeeeecccEEEE
Confidence            478899999999999999999999999999876666655  5788999999999999875 7899999999985321   


Q ss_pred             ------C------ccccc-cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          80 ------S------PLNVH-KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 ------~------~~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                            .      .+.+. .++++++++.|+++++||+++ -+....+.+|...++.+++||||.++++|+.||.+.+||
T Consensus       142 ~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~-~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~Lwd  220 (315)
T KOG0279|consen  142 IHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN-CQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWD  220 (315)
T ss_pred             EecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC-cchhhccccccccEEEEEECCCCCEEecCCCCceEEEEE
Confidence                  0      12222 367899999999999999998 677888899999999999999999999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.++.++.+  +|...|.+++|+|+.-.|+.+. +..|+|||+.+++++
T Consensus       221 L~~~k~lysl--~a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v  267 (315)
T KOG0279|consen  221 LNEGKNLYSL--EAFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVV  267 (315)
T ss_pred             ccCCceeEec--cCCCeEeeEEecCCceeEeecc-CCceEEEeccchhhh
Confidence            9999997765  6778999999999877776554 556999999998765

>KOG0273|consensus

Probab=100.00  E-value=2.4e-34  Score=202.05  Aligned_cols=190  Identities=15%  Similarity=0.323  Sum_probs=164.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|++++|+.+|..||+|+.||.+++|+.. +.....+..  |.++|.++.|+..|.+|++. +.|+++.+||..+... 
T Consensus       236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~~--HkgPI~slKWnk~G~yilS~-~vD~ttilwd~~~g~~~  311 (524)
T KOG0273|consen  236 KDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLGQ--HKGPIFSLKWNKKGTYILSG-GVDGTTILWDAHTGTVK  311 (524)
T ss_pred             CCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhhc--cCCceEEEEEcCCCCEEEec-cCCccEEEEeccCceEE
Confidence            579999999999999999999999999974 455555554  68999999999999999875 6999999999843221 


Q ss_pred             ------------------------------------------ccccccC-----------ceEEEecCCCcEEEEEccCC
Q psy8758          81 ------------------------------------------PLNVHKD-----------MTSAAANEDFNLYSYDIRQL  107 (198)
Q Consensus        81 ------------------------------------------~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~  107 (198)
                                                                .+.+|.+           .++++++.|+++++|.+.+ 
T Consensus       312 q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~-  390 (524)
T KOG0273|consen  312 QQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ-  390 (524)
T ss_pred             EeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCC-
Confidence                                                      1222322           3599999999999999998 


Q ss_pred             CcceeeecCCCcceEEEEEccCC---------CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEE
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTG---------REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVIS  178 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~---------~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  178 (198)
                      ......+..|...|..+.|+|+|         ..+++++.|++|++||+..+.++..+ ..|..+|.+++|+|+|+++|+
T Consensus       391 ~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f-~kH~~pVysvafS~~g~ylAs  469 (524)
T KOG0273|consen  391 SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTL-MKHQEPVYSVAFSPNGRYLAS  469 (524)
T ss_pred             CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEee-ccCCCceEEEEecCCCcEEEe
Confidence            67788889999999999999975         37899999999999999999999987 789999999999999999999


Q ss_pred             ecCCCeEEEEecCCCcccc
Q psy8758         179 ASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       179 ~~~dg~v~~w~~~~~~~~~  197 (198)
                      |+.||.|.+|+.++++.++
T Consensus       470 Gs~dg~V~iws~~~~~l~~  488 (524)
T KOG0273|consen  470 GSLDGCVHIWSTKTGKLVK  488 (524)
T ss_pred             cCCCCeeEeccccchheeE
Confidence            9999999999999998753

>KOG0263|consensus

Probab=100.00  E-value=5.9e-34  Score=210.47  Aligned_cols=192  Identities=20%  Similarity=0.311  Sum_probs=167.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--------ee---------------------eeeeeeeecCceeeEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--------KL---------------------GPIRKVVMSLRSNMVS   52 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--------~~---------------------~~~~~~~~~~~v~~~~   52 (198)
                      +.++|..|++|++.+|.|..|..|++|.+...+        .+                     ....-..|.++|....
T Consensus       379 ~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~s  458 (707)
T KOG0263|consen  379 QGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCS  458 (707)
T ss_pred             CcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeee
Confidence            468999999999999999999999999886311        00                     0011234789999999


Q ss_pred             eCCCCCeEEEEecCCccEEEEeccCCCC--ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCc
Q psy8758          53 WNPMEAFVFTAANEDFNLYSYDIRQLNS--PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS  119 (198)
Q Consensus        53 ~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  119 (198)
                      |+|+.++|+++ ++|+++++|.+.+...  .+.+|           .+.++++++.|++.++|.... ..+++.+.+|-.
T Consensus       459 FsPd~rfLlSc-SED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~-~~PlRifaghls  536 (707)
T KOG0263|consen  459 FSPDRRFLLSC-SEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDH-NKPLRIFAGHLS  536 (707)
T ss_pred             ecccccceeec-cCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeeccc-CCchhhhccccc
Confidence            99999999875 7999999999986543  22333           346799999999999999988 799999999999


Q ss_pred             ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+.|++|+|+..|+++||.|.+||+||..+|..+..+ .+|.++|.+++|||+|++|++|+.||.|.+||+.+++.+
T Consensus       537 DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF-~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v  612 (707)
T KOG0263|consen  537 DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF-TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLV  612 (707)
T ss_pred             ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe-cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcch
Confidence            9999999999999999999999999999999999988 799999999999999999999999999999999998875

>KOG0271|consensus

Probab=100.00  E-value=2.9e-33  Score=192.60  Aligned_cols=182  Identities=21%  Similarity=0.342  Sum_probs=149.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeeeeeecCceeeEEeCC-----CCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRKVVMSLRSNMVSWNP-----MEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      -|.|++|+|||+.||+|+.||.|++||..+++.. ..+..  |...|++++|.|     ..+++ ++++.||.+++||+.
T Consensus       159 WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~g--H~K~It~Lawep~hl~p~~r~l-as~skDg~vrIWd~~  235 (480)
T KOG0271|consen  159 WVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRG--HKKWITALAWEPLHLVPPCRRL-ASSSKDGSVRIWDTK  235 (480)
T ss_pred             EEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccC--cccceeEEeecccccCCCccce-ecccCCCCEEEEEcc
Confidence            3789999999999999999999999999887643 23333  567788888865     33444 345677777777763


Q ss_pred             CCC--------------------------------------------------------------------------C--
Q psy8758          77 QLN--------------------------------------------------------------------------S--   80 (198)
Q Consensus        77 ~~~--------------------------------------------------------------------------~--   80 (198)
                      ...                                                                          .  
T Consensus       236 ~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~  315 (480)
T KOG0271|consen  236 LGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPK  315 (480)
T ss_pred             CceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCC
Confidence            210                                                                          0  


Q ss_pred             -----------------------c-----------------------cccc-----------cCceEEEecCCCcEEEEE
Q psy8758          81 -----------------------P-----------------------LNVH-----------KDMTSAAANEDFNLYSYD  103 (198)
Q Consensus        81 -----------------------~-----------------------~~~~-----------~~~~~~~~~~~~~i~~~d  103 (198)
                                             .                       +.+|           ...++++++-|..|++||
T Consensus       316 ~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~  395 (480)
T KOG0271|consen  316 SFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWD  395 (480)
T ss_pred             ChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeee
Confidence                                   0                       0111           114699999999999999


Q ss_pred             ccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         104 IRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       104 ~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                      .++ ++.+..+.+|-.+|..++|+.|.++|++|+.|.++++|++++.++...+ .+|...|.++.|+|||+.+++|+.|.
T Consensus       396 g~t-Gk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DL-pGh~DEVf~vDwspDG~rV~sggkdk  473 (480)
T KOG0271|consen  396 GRT-GKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDL-PGHADEVFAVDWSPDGQRVASGGKDK  473 (480)
T ss_pred             CCC-cchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccC-CCCCceEEEEEecCCCceeecCCCce
Confidence            999 8999999999999999999999999999999999999999999988877 78999999999999999999999999


Q ss_pred             eEEEEe
Q psy8758         184 NLRVWK  189 (198)
Q Consensus       184 ~v~~w~  189 (198)
                      .+++|.
T Consensus       474 v~~lw~  479 (480)
T KOG0271|consen  474 VLRLWR  479 (480)
T ss_pred             EEEeec
Confidence            999995

>KOG0266|consensus

Probab=100.00  E-value=1.2e-31  Score=199.33  Aligned_cols=190  Identities=20%  Similarity=0.369  Sum_probs=162.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL-   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~-   78 (198)
                      ..|.++.|+++|+.+++++.++.+++|+....+  ....+  ..|...|..++|+|+++.+++ ++.|+++++||+... 
T Consensus       160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l--~~h~~~v~~~~fs~d~~~l~s-~s~D~tiriwd~~~~~  236 (456)
T KOG0266|consen  160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLREL--SGHTRGVSDVAFSPDGSYLLS-GSDDKTLRIWDLKDDG  236 (456)
T ss_pred             CceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccc--cccccceeeeEECCCCcEEEE-ecCCceEEEeeccCCC
Confidence            468999999999999999999999999996665  33333  236788999999999998776 579999999999433 


Q ss_pred             --CCccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          79 --NSPLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        79 --~~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                        .+.+.+|..           ..+++|+.|++|++||+++ +++...+.+|.+.|++++|++++++|++++.|+.|++|
T Consensus       237 ~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vw  315 (456)
T KOG0266|consen  237 RNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-GECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVW  315 (456)
T ss_pred             eEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-CeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEE
Confidence              244556654           4699999999999999999 89999999999999999999999999999999999999


Q ss_pred             EcCCCc--eeeEEeccCcc--cEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         146 LAHQGH--SRDIYHTKRMQ--HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~--~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+.++.  +...+ ..+..  +++.+.|+|++.++++++.|+.+++||+..++.+
T Consensus       316 d~~~~~~~~~~~~-~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~  369 (456)
T KOG0266|consen  316 DLETGSKLCLKLL-SGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSV  369 (456)
T ss_pred             ECCCCceeeeecc-cCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcce
Confidence            999998  44444 23333  6999999999999999999999999999987654

>KOG0284|consensus

Probab=100.00  E-value=1.4e-32  Score=190.32  Aligned_cols=189  Identities=13%  Similarity=0.238  Sum_probs=162.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-c
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-P   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-~   81 (198)
                      +|..+.|.|+|+.|++|+..|.+.+|+..+-.-...++  .|..+|.++.|++++.++++ |+.+|.|++|+...... .
T Consensus        98 ~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQ--aHDs~Vr~m~ws~~g~wmiS-gD~gG~iKyWqpnmnnVk~  174 (464)
T KOG0284|consen   98 PVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQ--AHDSPVRTMKWSHNGTWMIS-GDKGGMIKYWQPNMNNVKI  174 (464)
T ss_pred             ceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhh--hhcccceeEEEccCCCEEEE-cCCCceEEecccchhhhHH
Confidence            58899999999999999999999999974332111222  37889999999999999876 68999999999864321 1


Q ss_pred             c------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          82 L------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        82 ~------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      +            ..+.+..++++++|++|++||... .++...+.+|.-.+.+++|+|.-.++++++.|+.|++||.++
T Consensus       175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~-~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS  253 (464)
T KOG0284|consen  175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM-PKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS  253 (464)
T ss_pred             hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccC-CchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC
Confidence            1            123567899999999999999988 577778899999999999999999999999999999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.++..+ .+|+..|..+.|+|++++|++++.|..++++|+++.+.+
T Consensus       254 g~cl~tl-h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl  299 (464)
T KOG0284|consen  254 GSCLATL-HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKEL  299 (464)
T ss_pred             cchhhhh-hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHH
Confidence            9999988 689999999999999999999999999999999976654

>KOG0285|consensus

Probab=100.00  E-value=7.8e-32  Score=184.23  Aligned_cols=189  Identities=19%  Similarity=0.270  Sum_probs=166.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +-|.|+++.|-.++|++|+.|++++|||+.+++....+..  |-..|..+++++-.+++|++ +.|+.|+.||++..+..
T Consensus       152 gWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltG--hi~~vr~vavS~rHpYlFs~-gedk~VKCwDLe~nkvI  228 (460)
T KOG0285|consen  152 GWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTG--HIETVRGVAVSKRHPYLFSA-GEDKQVKCWDLEYNKVI  228 (460)
T ss_pred             ceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecc--hhheeeeeeecccCceEEEe-cCCCeeEEEechhhhhH
Confidence            4589999999999999999999999999999987666655  46678999999999999986 59999999999876643


Q ss_pred             cccc-------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 LNVH-------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 ~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      -..|             ...++++|+.|.++++||+++ ...+..+.+|..+|.++.+.|....+++|+.|++|++||++
T Consensus       229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRt-r~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~  307 (460)
T KOG0285|consen  229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT-RASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLR  307 (460)
T ss_pred             HHhccccceeEEEeccccceeEEecCCcceEEEeeecc-cceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeec
Confidence            3322             235799999999999999999 78899999999999999999988899999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .++....+ ..|...|.+++.+|....+|+++.|+ |+-|++..|+.+
T Consensus       308 agkt~~tl-t~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~  353 (460)
T KOG0285|consen  308 AGKTMITL-THHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFL  353 (460)
T ss_pred             cCceeEee-ecccceeeEEecCCchhhhhccCCcc-ceeccCCccchh
Confidence            99988877 68889999999999999999988764 899999887764

>KOG0286|consensus

Probab=100.00  E-value=2.8e-31  Score=176.96  Aligned_cols=188  Identities=17%  Similarity=0.275  Sum_probs=158.9

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCC--c----eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHAS--E----KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      |..++|+|.|+++|.|+-|+...||++.+.  +    ..+.+.  .|.+-+.++.|-+|+. |++ ++.|.++.+||+++
T Consensus       100 VMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~--gHtgylScC~f~dD~~-ilT-~SGD~TCalWDie~  175 (343)
T KOG0286|consen  100 VMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELA--GHTGYLSCCRFLDDNH-ILT-GSGDMTCALWDIET  175 (343)
T ss_pred             EEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeec--CccceeEEEEEcCCCc-eEe-cCCCceEEEEEccc
Confidence            778999999999999999999999999855  2    112222  2677889999998554 444 57899999999998


Q ss_pred             CCCc--cccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          78 LNSP--LNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        78 ~~~~--~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      .+..  +.+|            ....+++|+-|+..++||++. +...+.+++|...|+++.|.|+|.-+++|+.|++.+
T Consensus       176 g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~-~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcR  254 (343)
T KOG0286|consen  176 GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRS-GQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCR  254 (343)
T ss_pred             ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccC-cceeEeecccccccceEEEccCCCeeeecCCCceeE
Confidence            7643  3344            345799999999999999999 799999999999999999999999999999999999


Q ss_pred             EEEcCCCceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||++..+.+..+. ..-..+|++++||..|++|++|..|.++.+||.-.++.+
T Consensus       255 lyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~v  308 (343)
T KOG0286|consen  255 LYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERV  308 (343)
T ss_pred             EEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceE
Confidence            99999998887773 223468999999999999999999999999998777654

>KOG0265|consensus

Probab=100.00  E-value=3e-31  Score=177.30  Aligned_cols=185  Identities=15%  Similarity=0.235  Sum_probs=159.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.|+.+.|+|+|.+||+|+.|..|.+|+.... +....++  .|.+.|..+.|.+++..++++ +.|.+++.||.++.+.
T Consensus        48 geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lk--gHsgAVM~l~~~~d~s~i~S~-gtDk~v~~wD~~tG~~  124 (338)
T KOG0265|consen   48 GEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLK--GHSGAVMELHGMRDGSHILSC-GTDKTVRGWDAETGKR  124 (338)
T ss_pred             ceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeec--cccceeEeeeeccCCCEEEEe-cCCceEEEEeccccee
Confidence            67999999999999999999999999997432 2222333  478999999999999999986 5899999999997764


Q ss_pred             c--cccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          81 P--LNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        81 ~--~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      .  ++.|..            ..+.+++.|+++++||+++ ..+++.++ .+..++++.|..++..+.+|+-|+.|++||
T Consensus       125 ~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~-k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd  202 (338)
T KOG0265|consen  125 IRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK-KEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWD  202 (338)
T ss_pred             eehhccccceeeecCccccCCeEEEecCCCceEEEEeecc-cchhhccc-cceeEEEEEecccccceeeccccCceeeec
Confidence            3  333432            3588999999999999998 56666664 466799999999999999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ++........ .+|..+|+.+..+|+|.++.+-+.|.++++||++.
T Consensus       203 ~r~~d~~~~l-sGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp  247 (338)
T KOG0265|consen  203 LRKNDGLYTL-SGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP  247 (338)
T ss_pred             cccCcceEEe-ecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence            9999998887 79999999999999999999999999999999974

>KOG0291|consensus

Probab=100.00  E-value=2.7e-31  Score=196.18  Aligned_cols=188  Identities=13%  Similarity=0.316  Sum_probs=158.4

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .++++++||||+++|+|++||.|+|||..++-+..++..  |+..|+.+.|+..++.++++ +.||+++.||+.....  
T Consensus       352 ~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFte--Hts~Vt~v~f~~~g~~llss-SLDGtVRAwDlkRYrNfR  428 (893)
T KOG0291|consen  352 RITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTE--HTSGVTAVQFTARGNVLLSS-SLDGTVRAWDLKRYRNFR  428 (893)
T ss_pred             ceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEecc--CCCceEEEEEEecCCEEEEe-ecCCeEEeeeecccceee
Confidence            589999999999999999999999999999888777765  58889999999999999876 6999999999975431  


Q ss_pred             cccc------------ccCceEEEecCC-CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 PLNV------------HKDMTSAAANED-FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 ~~~~------------~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      .+..            ..+.++.+|+.| -.|.+|++++ ++.+..+.+|.++|.+++|+|++..|++++.|.+|++||+
T Consensus       429 Tft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qT-GqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~i  507 (893)
T KOG0291|consen  429 TFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQT-GQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDI  507 (893)
T ss_pred             eecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeec-CeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEe
Confidence            1111            123345566655 4699999999 8999999999999999999999999999999999999999


Q ss_pred             CCCc-eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGH-SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      -... ....+  .+...+..++|+|+|+.||++.-||.|.+||.+.+.++
T Consensus       508 f~s~~~vEtl--~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~  555 (893)
T KOG0291|consen  508 FSSSGTVETL--EIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQV  555 (893)
T ss_pred             eccCceeeeE--eeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceee
Confidence            7652 23333  34468999999999999999999999999999877665

>KOG0295|consensus

Probab=100.00  E-value=8e-32  Score=184.12  Aligned_cols=190  Identities=14%  Similarity=0.288  Sum_probs=163.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      .+|.+++|+..|+++++++.|-.+++||.++. ++.+.+..  |...|.+++|-|.+.+++++ +.|.+|+.|++.+.- 
T Consensus       151 ~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~g--h~h~vS~V~f~P~gd~ilS~-srD~tik~We~~tg~c  227 (406)
T KOG0295|consen  151 DSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIG--HEHGVSSVFFLPLGDHILSC-SRDNTIKAWECDTGYC  227 (406)
T ss_pred             cceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcC--cccceeeEEEEecCCeeeec-ccccceeEEeccccee
Confidence            46899999999999999999999999999753 33333333  56679999999999999875 799999999998654 


Q ss_pred             -Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC----------C-----CE
Q psy8758          80 -SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT----------G-----RE  132 (198)
Q Consensus        80 -~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~----------~-----~~  132 (198)
                       ..+.+|.           +.++++++.|.++++|-+.+ .++...+..|..++.+++|-|.          +     ++
T Consensus       228 v~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t-~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~  306 (406)
T KOG0295|consen  228 VKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVAT-KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQV  306 (406)
T ss_pred             EEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEecc-chhhhhhhccccceEEEEecccccCcchhhccCCCCCccE
Confidence             3444443           34689999999999999998 6788888999999999999774          2     48


Q ss_pred             EEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+++.|++|++||+.++.++..+ .+|...|..++|+|.|+||+++.+|+++++||+++++++
T Consensus       307 l~s~SrDktIk~wdv~tg~cL~tL-~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cm  369 (406)
T KOG0295|consen  307 LGSGSRDKTIKIWDVSTGMCLFTL-VGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCM  369 (406)
T ss_pred             EEeecccceEEEEeccCCeEEEEE-ecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceee
Confidence            999999999999999999999988 799999999999999999999999999999999998875

>KOG0284|consensus

Probab=100.00  E-value=4.1e-32  Score=187.96  Aligned_cols=190  Identities=18%  Similarity=0.288  Sum_probs=161.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      .+|.++.|+++|.++++|+.+|.|++|+.... .++.+..+ |...|++++|+|+...+++ +++|++|++||....+. 
T Consensus       139 s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~~~ah-h~eaIRdlafSpnDskF~t-~SdDg~ikiWdf~~~kee  215 (464)
T KOG0284|consen  139 SPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKIIQAH-HAEAIRDLAFSPNDSKFLT-CSDDGTIKIWDFRMPKEE  215 (464)
T ss_pred             ccceeEEEccCCCEEEEcCCCceEEecccchh-hhHHhhHh-hhhhhheeccCCCCceeEE-ecCCCeEEEEeccCCchh
Confidence            47999999999999999999999999998543 33444433 4578999999997777665 58999999999986553 


Q ss_pred             -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+.+|           ....+++++.|..|++||.++ +.++.++..|+..|..+.|+|++++|++++.|..+++||++
T Consensus       216 ~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS-g~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR  294 (464)
T KOG0284|consen  216 RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS-GSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR  294 (464)
T ss_pred             heeccCCCCcceeccCCccceeEEccCCceeEeecCCC-cchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehh
Confidence             33333           235799999999999999999 89999999999999999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCC-CCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+.++.+ .+|...|+++.|+|- ..+|.+|+.||.|..|.+...+++
T Consensus       295 ~mkEl~~~-r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~  342 (464)
T KOG0284|consen  295 TMKELFTY-RGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPL  342 (464)
T ss_pred             HhHHHHHh-hcchhhheeeccccccccceeeccCCCceEEEeccccccc
Confidence            87777776 789999999999995 457888999999999999855443

>KOG0318|consensus

Probab=99.98  E-value=3.8e-30  Score=183.36  Aligned_cols=191  Identities=18%  Similarity=0.277  Sum_probs=159.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      -|+|+.|+|||+++++.+.||++.+||=.+++.+..+.. ..|.+.|.+++|+||++.++++ +.|.++++||+.+... 
T Consensus       192 FV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~-SaDkt~KIWdVs~~slv  270 (603)
T KOG0318|consen  192 FVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTV-SADKTIKIWDVSTNSLV  270 (603)
T ss_pred             ceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEe-cCCceEEEEEeeccceE
Confidence            489999999999999999999999999999998887773 3378999999999999999886 6999999999864320 


Q ss_pred             --------------------------------------------ccccccC-----------------------------
Q psy8758          81 --------------------------------------------PLNVHKD-----------------------------   87 (198)
Q Consensus        81 --------------------------------------------~~~~~~~-----------------------------   87 (198)
                                                                  .+.+|..                             
T Consensus       271 ~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~  350 (603)
T KOG0318|consen  271 STWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSG  350 (603)
T ss_pred             EEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecC
Confidence                                                        0111110                             


Q ss_pred             --------------------------------------------------------------------------------
Q psy8758          88 --------------------------------------------------------------------------------   87 (198)
Q Consensus        88 --------------------------------------------------------------------------------   87 (198)
                                                                                                      
T Consensus       351 ~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~  430 (603)
T KOG0318|consen  351 SGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVL  430 (603)
T ss_pred             CccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEE
Confidence                                                                                            


Q ss_pred             -------------------------ceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEccCCCEEEEeecCCc
Q psy8758          88 -------------------------MTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        88 -------------------------~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                                               ..++.|++|+++++|.+.... ........|..++++++||||+.+||++...+.
T Consensus       431 l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rk  510 (603)
T KOG0318|consen  431 LQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRK  510 (603)
T ss_pred             EecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCc
Confidence                                     027888999999999988632 334456779999999999999999999999999


Q ss_pred             EEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         142 LRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +.+||..+.+.....-..|...|.+++|+|++.++|+|+-|-.|.||+++...
T Consensus       511 vv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~  563 (603)
T KOG0318|consen  511 VVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA  563 (603)
T ss_pred             EEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChh
Confidence            99999999887554445688999999999999999999999999999997643

>KOG0266|consensus

Probab=99.98  E-value=3.6e-30  Score=191.51  Aligned_cols=190  Identities=24%  Similarity=0.415  Sum_probs=156.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEc-cCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKA-HASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      ..|++++|+|+++++++++.|+++++||+ ..+..++.+..  |...|++++|+|+++. +++|+.|++|++||+++.. 
T Consensus       204 ~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~g--H~~~v~~~~f~p~g~~-i~Sgs~D~tvriWd~~~~~~  280 (456)
T KOG0266|consen  204 RGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKG--HSTYVTSVAFSPDGNL-LVSGSDDGTVRIWDVRTGEC  280 (456)
T ss_pred             cceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecC--CCCceEEEEecCCCCE-EEEecCCCcEEEEeccCCeE
Confidence            35899999999999999999999999999 44466666664  5888999999999955 4567899999999999643 


Q ss_pred             -CccccccC-----------ceEEEecCCCcEEEEEccCCCc--ceeeecCCCc--ceEEEEEccCCCEEEEeecCCcEE
Q psy8758          80 -SPLNVHKD-----------MTSAAANEDFNLYSYDIRQLNS--PLNVHKDMTS--AVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        80 -~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~--~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                       ..+..|.+           ..+++++.|+.|++||+.+ +.  +...+..+..  +++++.|+|++++++++..|+.++
T Consensus       281 ~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~  359 (456)
T KOG0266|consen  281 VRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLET-GSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLK  359 (456)
T ss_pred             EEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCC-CceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEE
Confidence             44555554           4588889999999999998 44  3455555544  599999999999999999999999


Q ss_pred             EEEcCCCceeeEEeccCcc---cEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQ---HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+..+.....+ .+|..   .+.+...++.++++++++.|+.|++|++.++..+
T Consensus       360 ~w~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~  414 (456)
T KOG0266|consen  360 LWDLRSGKSVGTY-TGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGIL  414 (456)
T ss_pred             EEEccCCcceeee-cccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchh
Confidence            9999999888877 44544   4555566789999999999999999999987654

>KOG0318|consensus

Probab=99.98  E-value=4.1e-30  Score=183.18  Aligned_cols=193  Identities=16%  Similarity=0.277  Sum_probs=159.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---ccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---FNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~~~d~~~~~   79 (198)
                      +++-..|||.|.++|+|...|+|||||....+.+..-.-....++|..++|++++++|+++|...   |.+.+||..+..
T Consensus        61 ~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~Sv  140 (603)
T KOG0318|consen   61 QVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSV  140 (603)
T ss_pred             eeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCcc
Confidence            57788999999999999999999999986544332222222478899999999999999987322   568899987665


Q ss_pred             Cccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          80 SPLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        80 ~~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      -.+.+|            ++..+++|++|+.+.+|+=.. -+....+..|..-|+++.|+|||.++++.+.||.+.+||-
T Consensus       141 Gei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPP-FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDG  219 (603)
T KOG0318|consen  141 GEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPP-FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDG  219 (603)
T ss_pred             ceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCC-eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcC
Confidence            555444            445699999999999999443 2334456678889999999999999999999999999999


Q ss_pred             CCCceeeEEe--ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+++.+..+.  .+|.+.|.+++|+||++.+++++.|.+++|||+.+.+++
T Consensus       220 ktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv  270 (603)
T KOG0318|consen  220 KTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLV  270 (603)
T ss_pred             CCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceE
Confidence            9999988873  489999999999999999999999999999999988765

>KOG0279|consensus

Probab=99.98  E-value=3.7e-30  Score=170.54  Aligned_cols=189  Identities=16%  Similarity=0.215  Sum_probs=158.6

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccCC-----ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHAS-----EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      +.|+.++..+. .+.+++++.|..+.+|++...     ...+.+..  |+..|..+..++++++.++ ++.|+.+++||+
T Consensus        16 d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~G--HsH~v~dv~~s~dg~~alS-~swD~~lrlWDl   92 (315)
T KOG0279|consen   16 DWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTG--HSHFVSDVVLSSDGNFALS-ASWDGTLRLWDL   92 (315)
T ss_pred             ceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeec--cceEecceEEccCCceEEe-ccccceEEEEEe
Confidence            46888999886 468889999999999998643     33444444  5677999999999999877 579999999999


Q ss_pred             cCCC--CccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCC--CcceEEEEEccC--CCEEEEeec
Q psy8758          76 RQLN--SPLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDM--TSAVTSVDYSPT--GREFVAGGY  138 (198)
Q Consensus        76 ~~~~--~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~sp~--~~~l~~~~~  138 (198)
                      .+.+  +.+.+|..           ..+++|+.|.+|++|+...  .+..++..+  ...|.++.|+|+  ..++++++.
T Consensus        93 ~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g--~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~  170 (315)
T KOG0279|consen   93 ATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG--VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASW  170 (315)
T ss_pred             cCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc--cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccC
Confidence            8754  34556654           3589999999999999985  455555433  789999999998  679999999


Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |++|++||+++-+....+ .+|.+.++.+++||||...++|+.||.+.+||++.++.+
T Consensus       171 DktvKvWnl~~~~l~~~~-~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~l  227 (315)
T KOG0279|consen  171 DKTVKVWNLRNCQLRTTF-IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNL  227 (315)
T ss_pred             CceEEEEccCCcchhhcc-ccccccEEEEEECCCCCEEecCCCCceEEEEEccCCcee
Confidence            999999999998887776 789999999999999999999999999999999999875

>KOG0277|consensus

Probab=99.97  E-value=9e-31  Score=171.58  Aligned_cols=188  Identities=22%  Similarity=0.290  Sum_probs=154.0

Q ss_pred             ceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .+.+++|+++. +.+++++.||.++|||+....  .++...+ |...|.++.|++..+..+.+++.|++|++|+...+..
T Consensus        62 ~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s--~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S  139 (311)
T KOG0277|consen   62 GLFDVAWSENHENQVIAASGDGSLRLFDLTMPS--KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS  139 (311)
T ss_pred             ceeEeeecCCCcceEEEEecCceEEEeccCCCC--cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence            47889999954 578889999999999964332  3333332 6788999999998888888889999999999875542


Q ss_pred             --c------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEE
Q psy8758          81 --P------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLY  145 (198)
Q Consensus        81 --~------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~  145 (198)
                        +            +.+|.+.++++++.|+.+++||++.+++.+. ++.|...+.++.|+.- ...++||+.|+.|+.|
T Consensus       140 v~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~w  218 (311)
T KOG0277|consen  140 VQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGW  218 (311)
T ss_pred             eEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEE
Confidence              2            3445567899999999999999999766665 8899999999999984 5688999999999999


Q ss_pred             EcCCCce-eeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCc
Q psy8758         146 LAHQGHS-RDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       146 d~~~~~~-~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      |++.-+. +..+ .+|+-.|+.++|||.. ..||+++.|-++++||...++
T Consensus       219 Dir~~r~pl~eL-~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d  268 (311)
T KOG0277|consen  219 DIRNLRTPLFEL-NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD  268 (311)
T ss_pred             ehhhccccceee-cCCceEEEEEecCcchhhHhhhccccceEEecccccch
Confidence            9998654 4444 7999999999999964 589999999999999997543

>KOG0315|consensus

Probab=99.97  E-value=1.2e-29  Score=166.02  Aligned_cols=189  Identities=14%  Similarity=0.269  Sum_probs=151.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..|+.+.+.|+++.||+++.- .||+||+.++... ++..+. |...|..+.|.-+|+.+++ |++||++++||++....
T Consensus        41 sqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~-Pv~t~e~h~kNVtaVgF~~dgrWMyT-gseDgt~kIWdlR~~~~  117 (311)
T KOG0315|consen   41 SQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPN-PVATFEGHTKNVTAVGFQCDGRWMYT-GSEDGTVKIWDLRSLSC  117 (311)
T ss_pred             cceeeEEEcCCcchhhhccCC-eeEEEEccCCCCC-ceeEEeccCCceEEEEEeecCeEEEe-cCCCceEEEEeccCccc
Confidence            468999999999999998764 7999999887642 343333 6688999999999999876 67999999999986431


Q ss_pred             --c---------cccc-cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 --P---------LNVH-KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 --~---------~~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                        .         +..| .+.-+++|..+|.|++||+....-....++.....+.++...|||..++.+...|..++|++.
T Consensus       118 qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~  197 (311)
T KOG0315|consen  118 QRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLL  197 (311)
T ss_pred             chhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEcc
Confidence              1         1122 234599999999999999997322223334456789999999999999999999999999998


Q ss_pred             CCceeeEE-----eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         149 QGHSRDIY-----HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       149 ~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .......+     .+.|++.+..+.+|||+++||+++.|.+++||+.++.
T Consensus       198 ~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~  247 (311)
T KOG0315|consen  198 NHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF  247 (311)
T ss_pred             CCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence            74322221     3678899999999999999999999999999999876

>KOG0645|consensus

Probab=99.97  E-value=6.7e-29  Score=164.07  Aligned_cols=188  Identities=15%  Similarity=0.259  Sum_probs=154.9

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccCCceeeeee--eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGPIR--KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +.|..++|+|- |..||+++.|+.|++|+...+.......  .-.|...|++++|+|.+++|++ ++.|.++.+|.-...
T Consensus        15 ~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~-aSFD~t~~Iw~k~~~   93 (312)
T KOG0645|consen   15 DRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLAS-ASFDATVVIWKKEDG   93 (312)
T ss_pred             CcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEE-eeccceEEEeecCCC
Confidence            46889999998 8999999999999999997543322221  1237888999999999997765 689999999986632


Q ss_pred             ----CCcccccc-----------CceEEEecCCCcEEEEEccCC--CcceeeecCCCcceEEEEEccCCCEEEEeecCCc
Q psy8758          79 ----NSPLNVHK-----------DMTSAAANEDFNLYSYDIRQL--NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        79 ----~~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                          ...+++|.           +.++++++.|..+.+|.+...  -.+...+..|...|..+.|+|...+|+++++|++
T Consensus        94 efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnT  173 (312)
T KOG0645|consen   94 EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNT  173 (312)
T ss_pred             ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCe
Confidence                23455553           467999999999999998842  2566788999999999999999999999999999


Q ss_pred             EEEEEcCC---CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         142 LRLYLAHQ---GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       142 v~v~d~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      |++|+-..   -.+...+ .+|...|++++|+|.|..|++++.|++++||...
T Consensus       174 Ik~~~~~~dddW~c~~tl-~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~  225 (312)
T KOG0645|consen  174 IKVYRDEDDDDWECVQTL-DGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY  225 (312)
T ss_pred             EEEEeecCCCCeeEEEEe-cCccceEEEEEecCCCceEEEecCCcceEeeeec
Confidence            99998773   3455665 7888899999999999999999999999999854

>KOG0273|consensus

Probab=99.97  E-value=4e-29  Score=175.99  Aligned_cols=186  Identities=18%  Similarity=0.337  Sum_probs=157.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee--------------------------------------eee-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI--------------------------------------RKV-   42 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~--------------------------------------~~~-   42 (198)
                      ++|.++.|+.+|++|++++.|+++.+||..+++..+.+                                      .++ 
T Consensus       277 gPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~  356 (524)
T KOG0273|consen  277 GPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFI  356 (524)
T ss_pred             CceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeee
Confidence            68999999999999999999999999999665431111                                      111 


Q ss_pred             eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--Cccccc--------------------cCceEEEecCCCcEE
Q psy8758          43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--SPLNVH--------------------KDMTSAAANEDFNLY  100 (198)
Q Consensus        43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--~~~~~~--------------------~~~~~~~~~~~~~i~  100 (198)
                      .|.++|.++.|+|.+..|+++ +.|+++++|...+..  ..+..|                    .+..+++++.|++|+
T Consensus       357 GH~g~V~alk~n~tg~LLaS~-SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~  435 (524)
T KOG0273|consen  357 GHHGEVNALKWNPTGSLLASC-SDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVK  435 (524)
T ss_pred             cccCceEEEEECCCCceEEEe-cCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEE
Confidence            267789999999999988775 799999999976432  122222                    234699999999999


Q ss_pred             EEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758         101 SYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       101 ~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      +||+.. +.++..+..|+.+|.+++|+|+|+++|+|+.||.|.+|+.++++....+  ...+.|..++|+.+|.+|..+-
T Consensus       436 lwdv~~-gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~--~~~~~Ifel~Wn~~G~kl~~~~  512 (524)
T KOG0273|consen  436 LWDVES-GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSY--QGTGGIFELCWNAAGDKLGACA  512 (524)
T ss_pred             EEEccC-CceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEee--cCCCeEEEEEEcCCCCEEEEEe
Confidence            999999 7999999999999999999999999999999999999999999998887  3346799999999999999999


Q ss_pred             CCCeEEEEecC
Q psy8758         181 DEMNLRVWKAH  191 (198)
Q Consensus       181 ~dg~v~~w~~~  191 (198)
                      .|+.+.+.|++
T Consensus       513 sd~~vcvldlr  523 (524)
T KOG0273|consen  513 SDGSVCVLDLR  523 (524)
T ss_pred             cCCCceEEEec
Confidence            99999999875

>KOG1407|consensus

Probab=99.97  E-value=6e-30  Score=168.27  Aligned_cols=194  Identities=17%  Similarity=0.239  Sum_probs=159.3

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +++|.+++|+.+|..+++|+.|+++.+|+++..+.........|...|-.++|+|..+-++++.+.|.+|++||.++.+.
T Consensus        20 ~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~   99 (313)
T KOG1407|consen   20 VQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKC   99 (313)
T ss_pred             hhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcE
Confidence            46799999999999999999999999999987765555555557788999999998888888888999999999987653


Q ss_pred             ccccc------------cCce-----------------------------------------EEEecCCCcEEEEEccCC
Q psy8758          81 PLNVH------------KDMT-----------------------------------------SAAANEDFNLYSYDIRQL  107 (198)
Q Consensus        81 ~~~~~------------~~~~-----------------------------------------~~~~~~~~~i~~~d~~~~  107 (198)
                      .....            .+.+                                         ++.....|.|.+..... 
T Consensus       100 ~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsyps-  178 (313)
T KOG1407|consen  100 TARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPS-  178 (313)
T ss_pred             EEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEeccc-
Confidence            22111            1122                                         33334445555555544 


Q ss_pred             CcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      -+++..++.|+....|+.|+|+|++||+|+.|..+.+||+..--+...+ ..+.-+|+.+.||.||++||++++|-.|-|
T Consensus       179 Lkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i-sRldwpVRTlSFS~dg~~lASaSEDh~IDI  257 (313)
T KOG1407|consen  179 LKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI-SRLDWPVRTLSFSHDGRMLASASEDHFIDI  257 (313)
T ss_pred             cccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee-ccccCceEEEEeccCcceeeccCccceEEe
Confidence            4677888999999999999999999999999999999999998888777 567789999999999999999999999999


Q ss_pred             EecCCCccc
Q psy8758         188 WKAHASEKL  196 (198)
Q Consensus       188 w~~~~~~~~  196 (198)
                      =+++||+.+
T Consensus       258 A~vetGd~~  266 (313)
T KOG1407|consen  258 AEVETGDRV  266 (313)
T ss_pred             EecccCCeE
Confidence            999998865

>KOG0276|consensus

Probab=99.97  E-value=4.7e-30  Score=186.46  Aligned_cols=189  Identities=17%  Similarity=0.316  Sum_probs=167.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC---C
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ---L   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~---~   78 (198)
                      .||.+..|-+.-+++++|++|..|++|+..+++.+..+..  |..-|++++.+|..++++++ ++|-.|++||-+.   +
T Consensus        56 ~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeA--H~DyIR~iavHPt~P~vLts-SDDm~iKlW~we~~wa~  132 (794)
T KOG0276|consen   56 VPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEA--HSDYIRSIAVHPTLPYVLTS-SDDMTIKLWDWENEWAC  132 (794)
T ss_pred             cchhhheeeeccceEEEecCCceEEEEecccceeeEEeec--cccceeeeeecCCCCeEEec-CCccEEEEeeccCceee
Confidence            3677888888889999999999999999999988777766  47789999999999999875 7999999999874   3


Q ss_pred             CCcccccc------------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC--CEEEEeecCCcEEE
Q psy8758          79 NSPLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG--REFVAGGYDKSLRL  144 (198)
Q Consensus        79 ~~~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~d~~v~v  144 (198)
                      .+.+.+|.            ...+++++-|++|++|.+.+ ..+..++++|...|+++.|-|-|  .+|++|+.|.+++|
T Consensus       133 ~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs-~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKv  211 (794)
T KOG0276|consen  133 EQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGS-PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKV  211 (794)
T ss_pred             eeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCC-CCCceeeeccccCcceEEeccCCCcceEEecCCCceEEE
Confidence            34555554            45699999999999999998 68889999999999999998755  59999999999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ||.++..+++++ .+|...|..+.|+|.=..+++|++||+++||+-.|-++
T Consensus       212 WDyQtk~CV~TL-eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~l  261 (794)
T KOG0276|consen  212 WDYQTKSCVQTL-EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKL  261 (794)
T ss_pred             eecchHHHHHHh-hcccccceEEEecCCCcEEEEecCCccEEEecCcceeh
Confidence            999999999988 79999999999999999999999999999999877543

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.4e-28  Score=183.08  Aligned_cols=194  Identities=14%  Similarity=0.202  Sum_probs=147.0

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCcee----eeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL----GPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~----~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      ++|.+++|+| ++++|++++.|++|++||+.++...    ..+..+ .|...|.+++|+|++..++++++.|+.|++||+
T Consensus        76 ~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl  155 (493)
T PTZ00421         76 GPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDV  155 (493)
T ss_pred             CCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEEC
Confidence            5799999999 8899999999999999999765311    112222 267889999999987655556779999999999


Q ss_pred             cCCCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcc-eEEEEEccCCCEEEEee----
Q psy8758          76 RQLNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA-VTSVDYSPTGREFVAGG----  137 (198)
Q Consensus        76 ~~~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-i~~~~~sp~~~~l~~~~----  137 (198)
                      ++...  .+..|.           +..+++++.|++|++||+++ ++.+..+..|... ...+.|.|++..+++++    
T Consensus       156 ~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rs-g~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s  234 (493)
T PTZ00421        156 ERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRD-GTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKS  234 (493)
T ss_pred             CCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCC-CcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCC
Confidence            86542  222232           34689999999999999998 6777778778654 45678999888777654    


Q ss_pred             cCCcEEEEEcCCCce-eeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCccc
Q psy8758         138 YDKSLRLYLAHQGHS-RDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKL  196 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~~  196 (198)
                      .|+.|++||+++... .......+...+....|++++++|++++ .|+.|++||+.+++.+
T Consensus       235 ~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~  295 (493)
T PTZ00421        235 QQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLT  295 (493)
T ss_pred             CCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceE
Confidence            478999999987543 3322223334566778999999988877 5999999999988764

>KOG0295|consensus

Probab=99.97  E-value=3.7e-29  Score=171.16  Aligned_cols=183  Identities=16%  Similarity=0.243  Sum_probs=163.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC--CC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL--NS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~--~~   80 (198)
                      .|.++.|-|.|.++++++.|.+|+.|+++++-++..+..+  ...|..+..+.||..+++ ++.|.++++|-+.+.  +.
T Consensus       195 ~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h--~ewvr~v~v~~DGti~As-~s~dqtl~vW~~~t~~~k~  271 (406)
T KOG0295|consen  195 GVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGH--SEWVRMVRVNQDGTIIAS-CSNDQTLRVWVVATKQCKA  271 (406)
T ss_pred             ceeeEEEEecCCeeeecccccceeEEecccceeEEeccCc--hHhEEEEEecCCeeEEEe-cCCCceEEEEEeccchhhh
Confidence            4789999999999999999999999999999988888764  668999999999887765 579999999998765  22


Q ss_pred             ccccc--------------------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE
Q psy8758          81 PLNVH--------------------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV  134 (198)
Q Consensus        81 ~~~~~--------------------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~  134 (198)
                      .+..|                          ...++.+++.|++|++||+.+ +.++.++.+|...|..++|+|.|+||+
T Consensus       272 ~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~t-g~cL~tL~ghdnwVr~~af~p~Gkyi~  350 (406)
T KOG0295|consen  272 ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVST-GMCLFTLVGHDNWVRGVAFSPGGKYIL  350 (406)
T ss_pred             hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccC-CeEEEEEecccceeeeeEEcCCCeEEE
Confidence            22221                          225899999999999999999 799999999999999999999999999


Q ss_pred             EeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         135 AGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ++..|+++++||++.+++.... ..|...++++.|+.+..++++|+-|..+++|..
T Consensus       351 ScaDDktlrvwdl~~~~cmk~~-~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  351 SCADDKTLRVWDLKNLQCMKTL-EAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             EEecCCcEEEEEeccceeeecc-CCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence            9999999999999999999988 589999999999999999999999999999974

>KOG0265|consensus

Probab=99.97  E-value=3.5e-29  Score=167.48  Aligned_cols=190  Identities=15%  Similarity=0.232  Sum_probs=159.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|..+.|.+|++.+++++.|.+++.||+++++..+..+.  |...++.+.-+.-|..++.+++.|+++++||+++....
T Consensus        91 gAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~--h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~  168 (338)
T KOG0265|consen   91 GAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKG--HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI  168 (338)
T ss_pred             ceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhcc--ccceeeecCccccCCeEEEecCCCceEEEEeecccchh
Confidence            5799999999999999999999999999999987777665  47778888877778999999999999999999954432


Q ss_pred             ccc------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          82 LNV------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        82 ~~~------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      ...            .....+++|+-|+.|++||++. ...+..+.+|.++|+.+..+|+|.++.+-+.|+++++||++.
T Consensus       169 ~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~-~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp  247 (338)
T KOG0265|consen  169 KTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRK-NDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRP  247 (338)
T ss_pred             hccccceeEEEEEecccccceeeccccCceeeecccc-CcceEEeecccCceeeEEeccCCCccccccccceEEEEEecc
Confidence            221            1234578899999999999998 788999999999999999999999999999999999999986


Q ss_pred             Cc----eeeEEeccC----cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         150 GH----SRDIYHTKR----MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       150 ~~----~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ..    ++..+ .+|    +......+|+|++..+.+++.|..+++||......
T Consensus       248 ~~p~~R~v~if-~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~  300 (338)
T KOG0265|consen  248 FAPSQRCVKIF-QGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRI  300 (338)
T ss_pred             cCCCCceEEEe-ecchhhhhhhcceeeccCCCCccccccccceEEEeecccccE
Confidence            33    24433 333    23467789999999999999999999999977544

>KOG0319|consensus

Probab=99.97  E-value=3.4e-29  Score=184.50  Aligned_cols=194  Identities=15%  Similarity=0.186  Sum_probs=164.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eee-eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|.+++...+|-+|++++.|.++++|.++.+... ..+ ....|...|.+++++..+..++++++.|.++++|+++..+
T Consensus       366 e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~  445 (775)
T KOG0319|consen  366 EAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSK  445 (775)
T ss_pred             hheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcc
Confidence            35777776667889999999999999998543211 112 2233788899999999888888889999999999998622


Q ss_pred             C-----------ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee
Q psy8758          80 S-----------PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        80 ~-----------~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                      .           ....|           .+.++++|+.|.+.++|++++ .....++.+|...+.++.|+|..+.++++|
T Consensus       446 ~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~-~~l~~vLsGH~RGvw~V~Fs~~dq~laT~S  524 (775)
T KOG0319|consen  446 ETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-LRLLGVLSGHTRGVWCVSFSKNDQLLATCS  524 (775)
T ss_pred             cccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC-ceEEEEeeCCccceEEEEeccccceeEecc
Confidence            1           11122           235799999999999999997 788899999999999999999999999999


Q ss_pred             cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         138 YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .|.+|+||.+.+..++.++ .+|...|..+.|-.+++.|++++.||.+++|++++++++.
T Consensus       525 gD~TvKIW~is~fSClkT~-eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~  583 (775)
T KOG0319|consen  525 GDKTVKIWSISTFSCLKTF-EGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEM  583 (775)
T ss_pred             CCceEEEEEeccceeeeee-cCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhh
Confidence            9999999999999999998 7999999999999999999999999999999999998864

>KOG0316|consensus

Probab=99.97  E-value=3.2e-29  Score=162.91  Aligned_cols=188  Identities=16%  Similarity=0.261  Sum_probs=163.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|.++.|+-+|++.++++.|.+|++|+...+.+++++..+  ...|..++.+.|+..++++ +.|..+.+||+.+.+. 
T Consensus        18 gaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsgh--G~EVlD~~~s~Dnskf~s~-GgDk~v~vwDV~TGkv~   94 (307)
T KOG0316|consen   18 GAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGH--GHEVLDAALSSDNSKFASC-GGDKAVQVWDVNTGKVD   94 (307)
T ss_pred             cceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCC--CceeeeccccccccccccC-CCCceEEEEEcccCeee
Confidence            68999999999999999999999999999999888888765  5668999999998888765 5899999999998763 


Q ss_pred             -ccccccC-----------ceEEEecCCCcEEEEEccCC-CcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 -PLNVHKD-----------MTSAAANEDFNLYSYDIRQL-NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 -~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                       .+.+|..           .++++|+-|.++++||.++. .+|++.+....+.|.++..+  +..+++|+.||+++.||+
T Consensus        95 Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydi  172 (307)
T KOG0316|consen   95 RRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDI  172 (307)
T ss_pred             eecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEe
Confidence             4555543           46899999999999999862 37888888888999999886  567999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +.|+....+ .+  .+|++++|++|++..+.++.|+++++.|-.+|++++
T Consensus       173 R~G~l~sDy-~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~  219 (307)
T KOG0316|consen  173 RKGTLSSDY-FG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLK  219 (307)
T ss_pred             ecceeehhh-cC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHH
Confidence            999887665 34  599999999999999999999999999999999874

>KOG0282|consensus

Probab=99.97  E-value=2.3e-30  Score=182.57  Aligned_cols=191  Identities=15%  Similarity=0.209  Sum_probs=159.9

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|+++.|.| .+.+|++++.|+.|+||++.. +++++++..  |..+|..++|++++..++++ +.|+.+++||+++..
T Consensus       215 kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~g--H~k~Vrd~~~s~~g~~fLS~-sfD~~lKlwDtETG~  291 (503)
T KOG0282|consen  215 KGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKG--HRKPVRDASFNNCGTSFLSA-SFDRFLKLWDTETGQ  291 (503)
T ss_pred             cccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhc--chhhhhhhhccccCCeeeee-ecceeeeeeccccce
Confidence            4688999999 889999999999999999976 666666665  58889999999999999876 699999999999876


Q ss_pred             Ccc-----------ccc--cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          80 SPL-----------NVH--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 ~~~-----------~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      ...           +.|  ...++++|+.|+.|+.||+++ ++.++.+..|-+.|..+.|-|+|+.+++++.|++++||+
T Consensus       292 ~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs-~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe  370 (503)
T KOG0282|consen  292 VLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRS-GKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWE  370 (503)
T ss_pred             EEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccc-hHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEE
Confidence            432           222  346899999999999999999 788899999999999999999999999999999999999


Q ss_pred             cCCCceeeEE---------------------------------------------eccCc--ccEEEEEEcCCCCEEEEe
Q psy8758         147 AHQGHSRDIY---------------------------------------------HTKRM--QHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       147 ~~~~~~~~~~---------------------------------------------~~~~~--~~v~~~~~s~~~~~l~~~  179 (198)
                      .+.+..+...                                             ..+|.  +.-..+.|||||++|++|
T Consensus       371 ~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SG  450 (503)
T KOG0282|consen  371 NRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSG  450 (503)
T ss_pred             cCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEee
Confidence            8743322111                                             01232  346778999999999999


Q ss_pred             cCCCeEEEEecCCCccc
Q psy8758         180 SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       180 ~~dg~v~~w~~~~~~~~  196 (198)
                      ..||.+.+||.++-+++
T Consensus       451 dsdG~v~~wdwkt~kl~  467 (503)
T KOG0282|consen  451 DSDGKVNFWDWKTTKLV  467 (503)
T ss_pred             cCCccEEEeechhhhhh
Confidence            99999999999987765

>KOG0282|consensus

Probab=99.97  E-value=1.4e-29  Score=178.60  Aligned_cols=184  Identities=16%  Similarity=0.227  Sum_probs=151.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|.+++|+++|..+++++.|+.+++||.++|++...+..   ...+.++.|+|++..+|.+|..|+.|+.||+++.+..
T Consensus       259 k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~---~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvv  335 (503)
T KOG0282|consen  259 KPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL---DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVV  335 (503)
T ss_pred             hhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec---CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHH
Confidence            5789999999999999999999999999999998776654   5667999999999888888999999999999977632


Q ss_pred             cc-------------cccCceEEEecCCCcEEEEEccCCC----------------------------------------
Q psy8758          82 LN-------------VHKDMTSAAANEDFNLYSYDIRQLN----------------------------------------  108 (198)
Q Consensus        82 ~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~----------------------------------------  108 (198)
                      ..             ...+..+++.++|+++++|+.+.+.                                        
T Consensus       336 qeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~  415 (503)
T KOG0282|consen  336 QEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTV  415 (503)
T ss_pred             HHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecc
Confidence            11             1234568999999999999876530                                        


Q ss_pred             -----cceeeecCCC--cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC-CCEEEEec
Q psy8758         109 -----SPLNVHKDMT--SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD-NKFVISAS  180 (198)
Q Consensus       109 -----~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~  180 (198)
                           ...+.+++|.  +.-..+.|||||++|++|+.||.+.+||.++-+.+..+ ..|.+++..+.|+|. ...+|+++
T Consensus       416 ~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l-kah~~~ci~v~wHP~e~Skvat~~  494 (503)
T KOG0282|consen  416 PPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL-KAHDQPCIGVDWHPVEPSKVATCG  494 (503)
T ss_pred             cccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcc-ccCCcceEEEEecCCCcceeEecc
Confidence                 0011223332  23567899999999999999999999999999888877 688899999999995 45899999


Q ss_pred             CCCeEEEEe
Q psy8758         181 DEMNLRVWK  189 (198)
Q Consensus       181 ~dg~v~~w~  189 (198)
                      .||.|++|+
T Consensus       495 w~G~Ikiwd  503 (503)
T KOG0282|consen  495 WDGLIKIWD  503 (503)
T ss_pred             cCceeEecC
Confidence            999999996

>KOG0277|consensus

Probab=99.97  E-value=1.2e-29  Score=166.29  Aligned_cols=187  Identities=21%  Similarity=0.319  Sum_probs=160.3

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++|.++.|++ +++.+++++.|++|++|+..-++.+.++..  |...|...+|+|....++.+++.|+.+++||++...+
T Consensus       105 ~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g--h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk  182 (311)
T KOG0277|consen  105 REVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNG--HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK  182 (311)
T ss_pred             hheEEeccccccceeEEeeccCCceEeecCCCCcceEeecC--CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc
Confidence            4689999998 556788889999999999987777777665  5788999999999999998889999999999986543


Q ss_pred             c--cccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCcEEEE
Q psy8758          81 P--LNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLY  145 (198)
Q Consensus        81 ~--~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v~  145 (198)
                      .  +..|            ...++++++.|+.|+.||+++...++..+.+|.-.|+.++|||.. ..|+++++|-+++||
T Consensus       183 ~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw  262 (311)
T KOG0277|consen  183 FMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIW  262 (311)
T ss_pred             eeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEec
Confidence            2  2333            346799999999999999999889999999999999999999974 589999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEec
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~  190 (198)
                      |...+.........|...+..+.||+ ++.++|+++.|+.++||+.
T Consensus       263 ~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  263 DPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            99876654444468889999999998 5679999999999999985

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=6.6e-28  Score=190.70  Aligned_cols=186  Identities=16%  Similarity=0.241  Sum_probs=152.2

Q ss_pred             ceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .|.+++|+| ++++|++++.||.|++||+.+++....+..  |...|.+++|+| ++..++ +|+.|+.|++||+++...
T Consensus       534 ~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~L~-Sgs~Dg~v~iWd~~~~~~  610 (793)
T PLN00181        534 KLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTLLA-SGSDDGSVKLWSINQGVS  610 (793)
T ss_pred             ceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCEEE-EEcCCCEEEEEECCCCcE
Confidence            477899987 478999999999999999988776555543  578899999998 455554 567999999999976432


Q ss_pred             c-------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 P-------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 ~-------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      .             +....+..+++|+.|+.|++||+++...++..+.+|...|.++.|. ++.+|++++.|++|++||+
T Consensus       611 ~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~  689 (793)
T PLN00181        611 IGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDL  689 (793)
T ss_pred             EEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeC
Confidence            1             1123356799999999999999987444677788999999999997 6789999999999999999


Q ss_pred             CCC------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         148 HQG------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       148 ~~~------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +.+      ..+..+ .+|...+..++|+|++++|++|+.|+.|++|+...+
T Consensus       690 ~~~~~~~~~~~l~~~-~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~  740 (793)
T PLN00181        690 SMSISGINETPLHSF-MGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFP  740 (793)
T ss_pred             CCCccccCCcceEEE-cCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCC
Confidence            853      344444 688889999999999999999999999999997654

>KOG0278|consensus

Probab=99.97  E-value=2.1e-29  Score=165.10  Aligned_cols=187  Identities=20%  Similarity=0.297  Sum_probs=159.8

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCce-eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEK-LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      |.+++|+.|.++|++|+.+..+|+||++..+. +..+..  |.+.|..+.|....+.++++ .+|++|++||.++...  
T Consensus       103 vk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~g--htg~Ir~v~wc~eD~~iLSS-add~tVRLWD~rTgt~v~  179 (334)
T KOG0278|consen  103 VKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISG--HTGGIRTVLWCHEDKCILSS-ADDKTVRLWDHRTGTEVQ  179 (334)
T ss_pred             eeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcC--CCCcceeEEEeccCceEEee-ccCCceEEEEeccCcEEE
Confidence            78999999999999999999999999986653 233333  68889999999988988886 6999999999987653  


Q ss_pred             ---------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc
Q psy8758          81 ---------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus        81 ---------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                               .++.+++.-+++-...+.|.+||..+ -.+++.++ .+..|.+.+++|+...+++|+.|..++.||..+++
T Consensus       180 sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaks-f~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tge  257 (334)
T KOG0278|consen  180 SLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKS-FGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGE  257 (334)
T ss_pred             EEecCCCCcceeeccCCCEEEEecCceeEEecccc-ccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCc
Confidence                     23445556678888889999999998 46666665 46679999999999999999999999999999999


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .+..+..+|.++|.++.|+|+|...++|++||+|++|.+..++.
T Consensus       258 Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  258 EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             eeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence            98887689999999999999999999999999999999876654

>KOG0296|consensus

Probab=99.97  E-value=4.2e-28  Score=166.06  Aligned_cols=151  Identities=13%  Similarity=0.194  Sum_probs=130.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|.+++.+|+.+++++|+.|..-.+|++.+++....+..  |...|.++.|+.++.+|++ |..+|.+++|...+....
T Consensus        65 ~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltg--HKDSVt~~~FshdgtlLAT-GdmsG~v~v~~~stg~~~  141 (399)
T KOG0296|consen   65 DSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTG--HKDSVTCCSFSHDGTLLAT-GDMSGKVLVFKVSTGGEQ  141 (399)
T ss_pred             CceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecC--CCCceEEEEEccCceEEEe-cCCCccEEEEEcccCceE
Confidence            6799999999999999999999999999999986555544  6888999999999998876 679999999999876532


Q ss_pred             c------------ccc-cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 L------------NVH-KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 ~------------~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      .            ..| ...++++|+.||.+++|.+.+ +...+.+.+|..++++-.|.|+|+.++++..||+|++||+.
T Consensus       142 ~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~-~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~k  220 (399)
T KOG0296|consen  142 WKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS-QALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPK  220 (399)
T ss_pred             EEeecccCceEEEEecccccEEEeecCCCcEEEEECCC-cceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecC
Confidence            2            223 346899999999999999998 57888999999999999999999999999999999999999


Q ss_pred             CCceeeEE
Q psy8758         149 QGHSRDIY  156 (198)
Q Consensus       149 ~~~~~~~~  156 (198)
                      +++++..+
T Consensus       221 tg~p~~~~  228 (399)
T KOG0296|consen  221 TGQPLHKI  228 (399)
T ss_pred             CCceeEEe
Confidence            77665444

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.97  E-value=1.4e-27  Score=167.51  Aligned_cols=190  Identities=19%  Similarity=0.307  Sum_probs=157.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ++|++++|+|+++++++++.||.+++|++.+++....+..  +...+..+.|+|+++.++++ +.++.+++|++....  
T Consensus        10 ~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~-~~~~~i~i~~~~~~~~~   86 (289)
T cd00200          10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKG--HTGPVRDVAASADGTYLASG-SSDKTIRLWDLETGECV   86 (289)
T ss_pred             CCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEec--CCcceeEEEECCCCCEEEEE-cCCCeEEEEEcCcccce
Confidence            5799999999999999999999999999987764444433  45667899999999887765 579999999998632  


Q ss_pred             Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          80 SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        80 ~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..+..+.           ..++++++.++.+.+||+++ .+....+..|...+.+++|+|+++++++++.|+.+++||++
T Consensus        87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~  165 (289)
T cd00200          87 RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET-GKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR  165 (289)
T ss_pred             EEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC-cEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcc
Confidence            2222221           24566777799999999997 57777777888899999999999999998889999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++....+ ..|...+.++.|+|+++.+++++.|+.+++||+++++.+
T Consensus       166 ~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~  212 (289)
T cd00200         166 TGKCVATL-TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCL  212 (289)
T ss_pred             ccccceeE-ecCccccceEEECCCcCEEEEecCCCcEEEEECCCCcee
Confidence            88877776 477779999999999999999988999999999877654

>KOG0281|consensus

Probab=99.97  E-value=8e-30  Score=174.22  Aligned_cols=182  Identities=18%  Similarity=0.309  Sum_probs=156.0

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +++|.|+.|.  .+.+++|+.|.+|++||++++++++.+..  |...|..+.|+.  .++++ ++.|.++.+||+.....
T Consensus       237 tGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlih--HceaVLhlrf~n--g~mvt-cSkDrsiaVWdm~sps~  309 (499)
T KOG0281|consen  237 TGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIH--HCEAVLHLRFSN--GYMVT-CSKDRSIAVWDMASPTD  309 (499)
T ss_pred             CCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhh--hcceeEEEEEeC--CEEEE-ecCCceeEEEeccCchH
Confidence            4678888885  56999999999999999999998887765  467799999984  45555 58999999999976542


Q ss_pred             -----ccccc---------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          81 -----PLNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        81 -----~~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                           .+.+|         .+.++++++.|.+|++|++.+ .+.++++.+|+..|.|+.+  .++++++|+.|++|++||
T Consensus       310 it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st-~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwd  386 (499)
T KOG0281|consen  310 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD  386 (499)
T ss_pred             HHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccc-eeeehhhhcccccceehhc--cCeEEEecCCCceEEEEe
Confidence                 23344         335799999999999999999 7899999999999999988  489999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +..|.++..+ .+|+.-|.++.|  |.+.+++|+.||+|++||+.++..
T Consensus       387 i~~G~cLRvL-eGHEeLvRciRF--d~krIVSGaYDGkikvWdl~aald  432 (499)
T KOG0281|consen  387 IECGACLRVL-EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALD  432 (499)
T ss_pred             ccccHHHHHH-hchHHhhhheee--cCceeeeccccceEEEEecccccC
Confidence            9999999887 799999999999  567899999999999999987653

>KOG0264|consensus

Probab=99.97  E-value=1.3e-28  Score=172.45  Aligned_cols=187  Identities=20%  Similarity=0.379  Sum_probs=153.7

Q ss_pred             eEEEECCCCc-eEEEeeCCCeEEEEEccCCce----eeee-eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           5 THTVWSLDNK-FVISASDEMNLRVWKAHASEK----LGPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         5 ~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~----~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      ++++|++... .+++++.|++|++||+.....    .... ....|...|..++|+|....+|.+.++|+.+.+||+|+.
T Consensus       181 ~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~  260 (422)
T KOG0264|consen  181 YGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN  260 (422)
T ss_pred             cccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC
Confidence            5688998654 788999999999999975432    2221 222378889999999999999988899999999999952


Q ss_pred             --C--C------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCc
Q psy8758          79 --N--S------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKS  141 (198)
Q Consensus        79 --~--~------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~  141 (198)
                        +  .            .++++.+.++++|+.|++|.+||+|+..+++..+.+|...|.++.|||.. ..||+++.|+.
T Consensus       261 ~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~r  340 (422)
T KOG0264|consen  261 TSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRR  340 (422)
T ss_pred             CCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCc
Confidence              1  1            24455667899999999999999999889999999999999999999975 58899999999


Q ss_pred             EEEEEcCCCce-------------eeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecC
Q psy8758         142 LRLYLAHQGHS-------------RDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAH  191 (198)
Q Consensus       142 v~v~d~~~~~~-------------~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~  191 (198)
                      +.+||+..-..             +...+.+|...|..+.|+|+.. .|++.++|+.+.||++.
T Consensus       341 l~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  341 LNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             EEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence            99999975211             1234789999999999999766 57788999999999986

>KOG0269|consensus

Probab=99.97  E-value=1.8e-29  Score=186.89  Aligned_cols=188  Identities=15%  Similarity=0.281  Sum_probs=155.5

Q ss_pred             eeEEEECC-CCceEEEeeCCCeEEEEEccCC---ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           4 VTHTVWSL-DNKFVISASDEMNLRVWKAHAS---EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         4 v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +..+.|+. +.++||+++..|.|.+||+...   +.+..+..  |+..+.++.|++..+.++.+|+.||.|++||++...
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~E--H~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~  167 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNE--HERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK  167 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhh--hccceeeeeeccCCccEEEecCCCceEEEEeeeccc
Confidence            45678875 5679999999999999999752   22223333  678899999999999999999999999999998654


Q ss_pred             C--------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          80 S--------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        80 ~--------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                      .              .+..+.+..++++.+.|.+++||++++..+...+.+|.+++.++.|+|++.+||+|+.|++|+||
T Consensus       168 S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiW  247 (839)
T KOG0269|consen  168 SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIW  247 (839)
T ss_pred             ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEE
Confidence            3              24455667899999999999999999899999999999999999999999999999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEec--CCCeEEEEecCCC
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISAS--DEMNLRVWKAHAS  193 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~dg~v~~w~~~~~  193 (198)
                      |+.+++...........+|..++|-|..+ .||+++  .|-.|+|||++..
T Consensus       248 d~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP  298 (839)
T KOG0269|consen  248 DMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP  298 (839)
T ss_pred             eccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence            99976654443233347999999999876 566664  5788999999753

>KOG0645|consensus

Probab=99.97  E-value=6.5e-28  Score=159.41  Aligned_cols=188  Identities=15%  Similarity=0.275  Sum_probs=149.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      +.|..++|+|.|++|++++-|.++.||.-..++ ...+..+. |+..|.+++|+++|.+|+++ +.|..+++|.+.... 
T Consensus        62 rsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e-fecv~~lEGHEnEVK~Vaws~sG~~LATC-SRDKSVWiWe~deddE  139 (312)
T KOG0645|consen   62 RSVRSVAWSPHGRYLASASFDATVVIWKKEDGE-FECVATLEGHENEVKCVAWSASGNYLATC-SRDKSVWIWEIDEDDE  139 (312)
T ss_pred             heeeeeeecCCCcEEEEeeccceEEEeecCCCc-eeEEeeeeccccceeEEEEcCCCCEEEEe-eCCCeEEEEEecCCCc
Confidence            578999999999999999999999999876553 22233333 68889999999999999875 799999999987332 


Q ss_pred             ----Ccccccc-----------CceEEEecCCCcEEEEEccC--CCcceeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          80 ----SPLNVHK-----------DMTSAAANEDFNLYSYDIRQ--LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        80 ----~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                          ..++.|.           ..++++++.|.+|++|+-..  .-.+.+++.+|...+.+++|+|.|..|++++.|+++
T Consensus       140 fec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv  219 (312)
T KOG0645|consen  140 FECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTV  219 (312)
T ss_pred             EEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcce
Confidence                2344443           35799999999999998763  136788999999999999999999999999999999


Q ss_pred             EEEEcCC-------Ccee------------------eEE-----------------eccCcccEEEEEEcCC-CCEEEEe
Q psy8758         143 RLYLAHQ-------GHSR------------------DIY-----------------HTKRMQHVTHTVWSLD-NKFVISA  179 (198)
Q Consensus       143 ~v~d~~~-------~~~~------------------~~~-----------------~~~~~~~v~~~~~s~~-~~~l~~~  179 (198)
                      +||-...       ++..                  ..+                 ...|...|+++.|+|. ..+|+++
T Consensus       220 ~Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~  299 (312)
T KOG0645|consen  220 SIWRLYTDLSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASG  299 (312)
T ss_pred             EeeeeccCcchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeec
Confidence            9998431       1110                  000                 1246778999999994 6789999


Q ss_pred             cCCCeEEEEecC
Q psy8758         180 SDEMNLRVWKAH  191 (198)
Q Consensus       180 ~~dg~v~~w~~~  191 (198)
                      +.||.|++|.+.
T Consensus       300 ~DDG~v~~W~l~  311 (312)
T KOG0645|consen  300 GDDGIVNFWELE  311 (312)
T ss_pred             CCCceEEEEEec
Confidence            999999999875

>KOG0643|consensus

Probab=99.97  E-value=6.3e-28  Score=159.35  Aligned_cols=188  Identities=16%  Similarity=0.222  Sum_probs=155.4

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe----cCCccEEEEecc
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA----NEDFNLYSYDIR   76 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~d~~i~~~d~~   76 (198)
                      .++|.|++.+.+.+.+++|+.|.+++|||+++|+++..+..   ..+|..+.|++++.+++++.    +..+.|.++|++
T Consensus        52 tGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~---~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~  128 (327)
T KOG0643|consen   52 TGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKT---NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR  128 (327)
T ss_pred             CceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeec---CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence            47899999999999999999999999999999997666654   67899999999999988764    234678899998


Q ss_pred             CCCCcc---------c-----------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          77 QLNSPL---------N-----------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        77 ~~~~~~---------~-----------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                      ......         .           +..+..+++|.++|.|..||+++..+.+...+.|...|+.|.++||..+++++
T Consensus       129 ~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~  208 (327)
T KOG0643|consen  129 DDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITG  208 (327)
T ss_pred             CChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEec
Confidence            433111         1           11234699999999999999998556677778899999999999999999999


Q ss_pred             ecCCcEEEEEcCCCceeeEEe------------------------------------------------------ccCcc
Q psy8758         137 GYDKSLRLYLAHQGHSRDIYH------------------------------------------------------TKRMQ  162 (198)
Q Consensus       137 ~~d~~v~v~d~~~~~~~~~~~------------------------------------------------------~~~~~  162 (198)
                      +.|.+-++||+.+-+.+..+.                                                      .+|-+
T Consensus       209 s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFG  288 (327)
T KOG0643|consen  209 SKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFG  288 (327)
T ss_pred             ccCccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhcccccccc
Confidence            999999999998654443331                                                      15778


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +|++++|+|+|+..++|++||.|++.-++
T Consensus       289 PINsvAfhPdGksYsSGGEDG~VR~h~Fd  317 (327)
T KOG0643|consen  289 PINSVAFHPDGKSYSSGGEDGYVRLHHFD  317 (327)
T ss_pred             CcceeEECCCCcccccCCCCceEEEEEec
Confidence            99999999999999999999999998654

>KOG0275|consensus

Probab=99.96  E-value=3.2e-30  Score=174.99  Aligned_cols=162  Identities=19%  Similarity=0.331  Sum_probs=142.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee------eeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK------VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .+.|..|||||+++++|+.||-|.+|+.-+|+..+.++.      .-+..+|.|+.|+.|...+++ |+.||.|++|.++
T Consensus       215 h~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAs-GsqDGkIKvWri~  293 (508)
T KOG0275|consen  215 HVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLAS-GSQDGKIKVWRIE  293 (508)
T ss_pred             chhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhc-cCcCCcEEEEEEe
Confidence            467899999999999999999999999988864433321      115678999999999887764 6788888888887


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI  155 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~  155 (198)
                      +                              +.+++.+. .|...|+++.||.|+..+++++.|.++++.-+++|+++..
T Consensus       294 t------------------------------G~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKE  343 (508)
T KOG0275|consen  294 T------------------------------GQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKE  343 (508)
T ss_pred             c------------------------------chHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHH
Confidence            6                              68888886 7999999999999999999999999999999999999998


Q ss_pred             EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         156 YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      + .+|.+.|+...|++||..+++++.||+|++|+.++++++
T Consensus       344 f-rGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~  383 (508)
T KOG0275|consen  344 F-RGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECL  383 (508)
T ss_pred             h-cCccccccceEEcCCCCeEEEecCCccEEEecCcchhhh
Confidence            8 799999999999999999999999999999999998876

>KOG1446|consensus

Probab=99.96  E-value=7e-27  Score=157.36  Aligned_cols=194  Identities=20%  Similarity=0.317  Sum_probs=152.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee-----------------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR-----------------------------------------   40 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-----------------------------------------   40 (198)
                      ..|+++.|+++|..+++++.|..++|||..+++..+.+.                                         
T Consensus        15 ~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR   94 (311)
T KOG1446|consen   15 GKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR   94 (311)
T ss_pred             CceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence            578999999999999999999999999998776433321                                         


Q ss_pred             ee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc----------ccc-ccCceEEEecCCCcEEEEEccCC-
Q psy8758          41 KV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP----------LNV-HKDMTSAAANEDFNLYSYDIRQL-  107 (198)
Q Consensus        41 ~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~----------~~~-~~~~~~~~~~~~~~i~~~d~~~~-  107 (198)
                      .+ .|...|++++.+|-+..+++ ++.|++|++||++..+..          ... ..+.++|++.....|++||+|.. 
T Consensus        95 YF~GH~~~V~sL~~sP~~d~FlS-~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~d  173 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKDDTFLS-SSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFD  173 (311)
T ss_pred             EcCCCCceEEEEEecCCCCeEEe-cccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccC
Confidence            11 25667899999998877665 579999999999954321          111 23346777777779999999974 


Q ss_pred             CcceeeecC---CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC--cccEEEEEEcCCCCEEEEecCC
Q psy8758         108 NSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR--MQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       108 ~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      ..|...+..   .....+.|.|||||++|+.+...+.+++.|.-+|.....+....  ...-.+.+|+||++++++|+.|
T Consensus       174 kgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~d  253 (311)
T KOG1446|consen  174 KGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDD  253 (311)
T ss_pred             CCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCC
Confidence            456665543   36678999999999999999999999999999999877762211  1223678899999999999999


Q ss_pred             CeEEEEecCCCccc
Q psy8758         183 MNLRVWKAHASEKL  196 (198)
Q Consensus       183 g~v~~w~~~~~~~~  196 (198)
                      |+|++|++++|+++
T Consensus       254 g~i~vw~~~tg~~v  267 (311)
T KOG1446|consen  254 GTIHVWNLETGKKV  267 (311)
T ss_pred             CcEEEEEcCCCcEe
Confidence            99999999999875

>KOG0640|consensus

Probab=99.96  E-value=3.4e-28  Score=164.01  Aligned_cols=193  Identities=17%  Similarity=0.304  Sum_probs=157.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccC------Cc--------ee-eeeeee-eecCceeeEEeCCCCCeEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA------SE--------KL-GPIRKV-VMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~------~~--------~~-~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      +++.+.+|||||.++++|+.|..|+|+|++.      .+        .- -.++++ .|..+|+.+.|+|....|+ +|+
T Consensus       113 ~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILi-S~s  191 (430)
T KOG0640|consen  113 SPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILI-SGS  191 (430)
T ss_pred             cceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEE-ecc
Confidence            4688999999999999999999999999861      10        00 112222 2678899999999877665 478


Q ss_pred             CCccEEEEeccCCC--------------Ccccccc-CceEEEecCCCcEEEEEccCCCcceeee---cCCCcceEEEEEc
Q psy8758          66 EDFNLYSYDIRQLN--------------SPLNVHK-DMTSAAANEDFNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYS  127 (198)
Q Consensus        66 ~d~~i~~~d~~~~~--------------~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~s  127 (198)
                      .|++++++|.....              ..+..|+ +.+++.|++-..+++||+.+ -++...-   ..|...|+++.++
T Consensus       192 rD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T-~QcfvsanPd~qht~ai~~V~Ys  270 (430)
T KOG0640|consen  192 RDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT-YQCFVSANPDDQHTGAITQVRYS  270 (430)
T ss_pred             CCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc-eeEeeecCcccccccceeEEEec
Confidence            99999999986432              2344454 35688888889999999997 4444332   4588899999999


Q ss_pred             cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.|+..++++.||.|++||--+++++..+...|. ..|.+..|..+|+++++++.|..+++|.+.+++.+
T Consensus       271 ~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l  340 (430)
T KOG0640|consen  271 STGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRML  340 (430)
T ss_pred             CCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceE
Confidence            9999999999999999999999999988866774 57999999999999999999999999999999876

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=5.1e-27  Score=185.68  Aligned_cols=185  Identities=17%  Similarity=0.264  Sum_probs=148.7

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|++++|+| ++.+|++|+.|+.|++||+.++.....+.   ....+.++.|++ ++..++ +|+.|+.|++||++...
T Consensus       576 ~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~g~~la-tgs~dg~I~iwD~~~~~  651 (793)
T PLN00181        576 KRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK---TKANICCVQFPSESGRSLA-FGSADHKVYYYDLRNPK  651 (793)
T ss_pred             CCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe---cCCCeEEEEEeCCCCCEEE-EEeCCCeEEEEECCCCC
Confidence            4699999997 78999999999999999998877655554   245688999965 455555 56799999999998643


Q ss_pred             C---ccccc----------cCceEEEecCCCcEEEEEccCC-----CcceeeecCCCcceEEEEEccCCCEEEEeecCCc
Q psy8758          80 S---PLNVH----------KDMTSAAANEDFNLYSYDIRQL-----NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        80 ~---~~~~~----------~~~~~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                      .   .+..|          .+..+++++.|++|++||++..     ..++..+.+|...+.+++|+|++++|++|+.|+.
T Consensus       652 ~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~  731 (793)
T PLN00181        652 LPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNE  731 (793)
T ss_pred             ccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCE
Confidence            2   22333          2356899999999999999742     2567788899999999999999999999999999


Q ss_pred             EEEEEcCCCceeeEE------------eccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         142 LRLYLAHQGHSRDIY------------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       142 v~v~d~~~~~~~~~~------------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      |++|+.........+            ...+...|.+++|+|++..|++++.||.|++|++
T Consensus       732 v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        732 VFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             EEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            999998765433221            1234467999999999999999999999999996

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=1.2e-26  Score=173.99  Aligned_cols=192  Identities=11%  Similarity=0.172  Sum_probs=142.2

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccCCce-ee----eeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEK-LG----PIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~-~~----~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      ++|.+++|+|+ +++|++|+.|+.|++||+.++.. ..    .+.. ..|...|.+++|+|++..++++++.|+.|++||
T Consensus        75 ~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWD  154 (568)
T PTZ00420         75 SSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWD  154 (568)
T ss_pred             CCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEE
Confidence            57999999996 78999999999999999975421 11    1111 236778999999999988877778999999999


Q ss_pred             ccCCCCccc-----------c-ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE-----EEEccCCCEEEEee
Q psy8758          75 IRQLNSPLN-----------V-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS-----VDYSPTGREFVAGG  137 (198)
Q Consensus        75 ~~~~~~~~~-----------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~-----~~~sp~~~~l~~~~  137 (198)
                      +++......           . ..+..+++++.|+.|++||+++ +..+..+.+|.+.+..     ..|++++.++++++
T Consensus       155 l~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rs-g~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG  233 (568)
T PTZ00420        155 IENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRK-QEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTG  233 (568)
T ss_pred             CCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCC-CcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEE
Confidence            986643221           1 1235678888999999999998 6777888888876433     33568989999988


Q ss_pred             cCC----cEEEEEcCC-CceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         138 YDK----SLRLYLAHQ-GHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       138 ~d~----~v~v~d~~~-~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .|+    .|++||++. ++++.... ..+.+.+...-..++|.++++|+.|+.|++|++..+.
T Consensus       234 ~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~  296 (568)
T PTZ00420        234 FSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS  296 (568)
T ss_pred             cCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence            764    799999995 45554431 2222333333335568899999999999999997764

>KOG0276|consensus

Probab=99.96  E-value=1.4e-27  Score=173.67  Aligned_cols=191  Identities=10%  Similarity=0.257  Sum_probs=168.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..|.++.|+|...+++++-..|.+.||+.++...++.+...  ..+|++..|-+..+.+++ |++|..|++|+..+..+ 
T Consensus        14 dRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~--~~PvRa~kfiaRknWiv~-GsDD~~IrVfnynt~ekV   90 (794)
T KOG0276|consen   14 DRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVS--EVPVRAAKFIARKNWIVT-GSDDMQIRVFNYNTGEKV   90 (794)
T ss_pred             CceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeec--ccchhhheeeeccceEEE-ecCCceEEEEecccceee
Confidence            46899999999999999999999999999988877777653  678899999998888875 78999999999987654 


Q ss_pred             -cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEEEc
Q psy8758          81 -PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 -~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~  147 (198)
                       .+..|.           .++++++++|-.|++||-+..-.+.+++++|...|++++|+|. .+.+++++.|++|++|.+
T Consensus        91 ~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWsl  170 (794)
T KOG0276|consen   91 KTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSL  170 (794)
T ss_pred             EEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEc
Confidence             344443           3579999999999999999877889999999999999999994 669999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCC--CEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDN--KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+..+.+++ .+|...|+++.+-+.|  .+|++|++|.++++||.+|..++
T Consensus       171 gs~~~nfTl-~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV  220 (794)
T KOG0276|consen  171 GSPHPNFTL-EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCV  220 (794)
T ss_pred             CCCCCceee-eccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHH
Confidence            999999888 6999999999998754  59999999999999999998775

>KOG0291|consensus

Probab=99.96  E-value=3.8e-27  Score=174.46  Aligned_cols=187  Identities=16%  Similarity=0.216  Sum_probs=160.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .|++.+|++.-+.|++|-..|...+|++.+-.++..+...  ..+|..+.|+..|..++..++.-|.+.+|+.+.....+
T Consensus       267 kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis--~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVl  344 (893)
T KOG0291|consen  267 KVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSIS--DQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVL  344 (893)
T ss_pred             ceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecc--cceeeEEEecccCCEEEEcCCccceEEEEEeeccceee
Confidence            5899999999999999999999999999888777766653  46789999999999999988788999999987654333


Q ss_pred             c--cc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          83 N--VH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        83 ~--~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      +  +|           .+.++++|++||+|++||... +.++.++..|...++.+.|+..|+.+++++.||+|+.||+..
T Consensus       345 KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~S-gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkR  423 (893)
T KOG0291|consen  345 KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQS-GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKR  423 (893)
T ss_pred             eccccccceeeEEECCCCcEEEeccCCCcEEEEeccC-ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecc
Confidence            2  23           235799999999999999998 899999999999999999999999999999999999999873


Q ss_pred             C--------------------------------------------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758         150 G--------------------------------------------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       150 ~--------------------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v  185 (198)
                      .                                            +.+..+ .+|+++|.+++|+|++..|++++.|.+|
T Consensus       424 YrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiL-sGHEgPVs~l~f~~~~~~LaS~SWDkTV  502 (893)
T KOG0291|consen  424 YRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDIL-SGHEGPVSGLSFSPDGSLLASGSWDKTV  502 (893)
T ss_pred             cceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehh-cCCCCcceeeEEccccCeEEeccccceE
Confidence            2                                            222222 4899999999999999999999999999


Q ss_pred             EEEecCCC
Q psy8758         186 RVWKAHAS  193 (198)
Q Consensus       186 ~~w~~~~~  193 (198)
                      ++||+-..
T Consensus       503 RiW~if~s  510 (893)
T KOG0291|consen  503 RIWDIFSS  510 (893)
T ss_pred             EEEEeecc
Confidence            99998543

>KOG0310|consensus

Probab=99.96  E-value=1.5e-27  Score=168.58  Aligned_cols=189  Identities=15%  Similarity=0.192  Sum_probs=156.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      -|.++.|..||+++++|+..|.|++||+.+...++.+..  |..++..+.|+|.+..++++|++|+.+++||+.+...  
T Consensus        70 ~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~a--h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~  147 (487)
T KOG0310|consen   70 VVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYA--HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQA  147 (487)
T ss_pred             ceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhh--ccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEE
Confidence            478999999999999999999999999765444455554  5778999999999999999999999999999986542  


Q ss_pred             ccccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 PLNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 ~~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      .+.+|.+            .++++|+.||+|++||++.....+..+ .|..+|.++.+-|.|..+++++. +.|++||+.
T Consensus       148 ~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~  225 (487)
T KOG0310|consen  148 ELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLT  225 (487)
T ss_pred             EecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEec
Confidence            2334433            369999999999999999854555555 48899999999999999999875 579999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|.........|...|+++++..++..|++++-|+.|++||+.+-+.
T Consensus       226 ~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kv  272 (487)
T KOG0310|consen  226 TGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKV  272 (487)
T ss_pred             CCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEE
Confidence            76655444355889999999999999999999999999999776554

>KOG0292|consensus

Probab=99.96  E-value=1.8e-27  Score=179.04  Aligned_cols=189  Identities=12%  Similarity=0.259  Sum_probs=161.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..|..++|+|...+++++--.|.|++||.+.+..+..+..  |.++|..++|+|+++.+++ |++|..|++|+..+... 
T Consensus        10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFde--HdGpVRgv~FH~~qplFVS-GGDDykIkVWnYk~rrcl   86 (1202)
T KOG0292|consen   10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDE--HDGPVRGVDFHPTQPLFVS-GGDDYKIKVWNYKTRRCL   86 (1202)
T ss_pred             ccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhc--cCCccceeeecCCCCeEEe-cCCccEEEEEecccceeh
Confidence            3578999999999999999999999999998887777765  5899999999999887765 67999999999876542 


Q ss_pred             -ccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+.+|-+           +-++++++|.+|++|+..+ ++++..+++|...|+|.+|+|....++++|.|.+|||||+.
T Consensus        87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs-r~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDis  165 (1202)
T KOG0292|consen   87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS-RKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDIS  165 (1202)
T ss_pred             hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC-CceEEEEecCceEEEeeccCCccceEEEecccceEEEEeec
Confidence             3334433           4599999999999999999 89999999999999999999999999999999999999986


Q ss_pred             C--------C--------------------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         149 Q--------G--------------------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       149 ~--------~--------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .        +                    ..+..+..+|...|+-++|+|.-..+++|++|..|++|.++.-+
T Consensus       166 GLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetK  239 (1202)
T KOG0292|consen  166 GLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK  239 (1202)
T ss_pred             chhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccc
Confidence            2        1                    01222346899999999999999999999999999999987543

>KOG0305|consensus

Probab=99.96  E-value=3.4e-27  Score=171.30  Aligned_cols=186  Identities=19%  Similarity=0.359  Sum_probs=155.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|+++.|+++|++|++|..+|.|.|||..+.+....+... |...|.+++|+   ..++++|+.++.|..+|++.....
T Consensus       218 ~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~-h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~  293 (484)
T KOG0305|consen  218 ELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGS-HASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHV  293 (484)
T ss_pred             CceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCC-cCceeEEEecc---CceEEEecCCCcEEEEEEecchhh
Confidence            56899999999999999999999999999877766666552 57889999998   556778999999999999865533


Q ss_pred             ---cccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEee--cCCcEEE
Q psy8758          82 ---LNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGG--YDKSLRL  144 (198)
Q Consensus        82 ---~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~--~d~~v~v  144 (198)
                         +..|..           ..+++|+.|+.+.+||... ..+...+..|...|..++|+|- ...||+|+  .|+.|++
T Consensus       294 ~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~-~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~f  372 (484)
T KOG0305|consen  294 VSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS-PEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKF  372 (484)
T ss_pred             hhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCC-ccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEE
Confidence               334433           4699999999999999976 6888899999999999999995 55888875  4899999


Q ss_pred             EEcCCCceeeEE------------------------------------------eccCcccEEEEEEcCCCCEEEEecCC
Q psy8758         145 YLAHQGHSRDIY------------------------------------------HTKRMQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       145 ~d~~~~~~~~~~------------------------------------------~~~~~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      ||..++..+..+                                          ..+|...|..++++|||..+++++.|
T Consensus       373 wn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~D  452 (484)
T KOG0305|consen  373 WNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAAD  452 (484)
T ss_pred             EEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEeccc
Confidence            999865433221                                          23688899999999999999999999


Q ss_pred             CeEEEEecCC
Q psy8758         183 MNLRVWKAHA  192 (198)
Q Consensus       183 g~v~~w~~~~  192 (198)
                      .++++|++-+
T Consensus       453 ETlrfw~~f~  462 (484)
T KOG0305|consen  453 ETLRFWNLFD  462 (484)
T ss_pred             CcEEeccccC
Confidence            9999999865

>KOG0319|consensus

Probab=99.96  E-value=1.2e-27  Score=176.49  Aligned_cols=189  Identities=19%  Similarity=0.236  Sum_probs=161.2

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCcee---eee----eeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL---GPI----RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~---~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      ..|.+++++..+ .+|++++.|+++++|++...+..   ..+    ....|...|++++.+|+.+.+++ |+.|.+.++|
T Consensus       412 ~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT-~SqDktaKiW  490 (775)
T KOG0319|consen  412 NSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIAT-GSQDKTAKIW  490 (775)
T ss_pred             cccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEe-cccccceeee
Confidence            468889997755 59999999999999999752211   111    22347889999999998777654 7899999999


Q ss_pred             eccCCC--CccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          74 DIRQLN--SPLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        74 d~~~~~--~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                      ++++..  ..+.+|+.           .++++++.|++|++|.+.+ ..+++++.+|...|....|-.+|+.|++++.||
T Consensus       491 ~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~-fSClkT~eGH~~aVlra~F~~~~~qliS~~adG  569 (775)
T KOG0319|consen  491 DLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST-FSCLKTFEGHTSAVLRASFIRNGKQLISAGADG  569 (775)
T ss_pred             cccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc-ceeeeeecCccceeEeeeeeeCCcEEEeccCCC
Confidence            999554  34556654           4699999999999999999 799999999999999999999999999999999


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      -+++|+++++++...+ ..|+..|++++-+|...++++|+.||.|.+|.=.|.
T Consensus       570 liKlWnikt~eC~~tl-D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te  621 (775)
T KOG0319|consen  570 LIKLWNIKTNECEMTL-DAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTE  621 (775)
T ss_pred             cEEEEeccchhhhhhh-hhccceeEEEeecCccceeEecCCCeEEEEeecCcH
Confidence            9999999999999988 789999999999999999999999999999975443

>KOG0641|consensus

Probab=99.96  E-value=2.9e-26  Score=148.81  Aligned_cols=189  Identities=19%  Similarity=0.265  Sum_probs=149.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceee---eeeeeeecCceeeEEeCCC----CCeEEEEecCCccEEEEe
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG---PIRKVVMSLRSNMVSWNPM----EAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~d~~i~~~d   74 (198)
                      ++|+|.+|||+|+++++|++|..|++..++...+..   .+.-.-|.+.|..++|-.+    +..++++|..|.+|++-|
T Consensus        90 gsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~td  169 (350)
T KOG0641|consen   90 GSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITD  169 (350)
T ss_pred             ccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEee
Confidence            679999999999999999999999998765432211   1111226788999999543    345555555677777777


Q ss_pred             ccCCC--CccccccC----------ceEEEecCCCcEEEEEccCCCcceeeecC-------CCcceEEEEEccCCCEEEE
Q psy8758          75 IRQLN--SPLNVHKD----------MTSAAANEDFNLYSYDIRQLNSPLNVHKD-------MTSAVTSVDYSPTGREFVA  135 (198)
Q Consensus        75 ~~~~~--~~~~~~~~----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~i~~~~~sp~~~~l~~  135 (198)
                      ..+..  ..+.+|.+          ..+++|++|.+|++||++- ...+..+..       ..+.|.+++..|.|++|++
T Consensus       170 c~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv-~~~v~~l~~~~~~~glessavaav~vdpsgrll~s  248 (350)
T KOG0641|consen  170 CGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRV-NSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLAS  248 (350)
T ss_pred             cCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeec-cceeeeccCcccCCCcccceeEEEEECCCcceeee
Confidence            76543  45556654          4588999999999999997 455554421       1356899999999999999


Q ss_pred             eecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         136 GGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       136 ~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |-.|....+||++.+++++.+ ..|...|+++.|||...++++++.|..|++-|++.
T Consensus       249 g~~dssc~lydirg~r~iq~f-~phsadir~vrfsp~a~yllt~syd~~ikltdlqg  304 (350)
T KOG0641|consen  249 GHADSSCMLYDIRGGRMIQRF-HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG  304 (350)
T ss_pred             ccCCCceEEEEeeCCceeeee-CCCccceeEEEeCCCceEEEEecccceEEEeeccc
Confidence            999999999999999999988 57889999999999999999999999999999863

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.96  E-value=5.6e-26  Score=159.42  Aligned_cols=190  Identities=19%  Similarity=0.323  Sum_probs=154.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..+..+.|+|+++++++++.+|.+++|++.+++....+..  +...+.++.|+|+++.+++ ++.++.+.+||+++... 
T Consensus        52 ~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~  128 (289)
T cd00200          52 GPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTG--HTSYVSSVAFSPDGRILSS-SSRDKTIKVWDVETGKCL  128 (289)
T ss_pred             cceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEec--cCCcEEEEEEcCCCCEEEE-ecCCCeEEEEECCCcEEE
Confidence            3567899999999999999999999999987765555543  4567999999999766654 55799999999974321 


Q ss_pred             -cccc----------cc-CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNV----------HK-DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~----------~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+..          ++ +.++++++.++.+++||++. .+.+..+..|...+.+++|+|+++.+++++.++.+++||++
T Consensus       129 ~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~  207 (289)
T cd00200         129 TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT-GKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS  207 (289)
T ss_pred             EEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc-cccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECC
Confidence             1111          22 34566666799999999987 57777888888899999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .++....+ ..|...+.++.|+|++.++++++.||.+++|++.+++.+
T Consensus       208 ~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~  254 (289)
T cd00200         208 TGKCLGTL-RGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECV  254 (289)
T ss_pred             CCceecch-hhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeE
Confidence            88877765 467789999999999889988888999999999876653

>KOG4283|consensus

Probab=99.96  E-value=4.7e-27  Score=157.49  Aligned_cols=193  Identities=18%  Similarity=0.347  Sum_probs=156.1

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCce------e---ee-e-eee--eecCceeeEEeCCCCCeEEEEecCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEK------L---GP-I-RKV--VMSLRSNMVSWNPMEAFVFTAANED   67 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~------~---~~-~-~~~--~~~~~v~~~~~~~~~~~~~~~~~~d   67 (198)
                      +.|+++.+.+ .|+++++|+.||.+.+||++....      .   .+ + +.+  .|.-.|..+.|-|-..-+|++++.|
T Consensus        44 GsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFD  123 (397)
T KOG4283|consen   44 GSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFD  123 (397)
T ss_pred             CccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeeccccc
Confidence            5788999988 789999999999999999974321      0   11 1 111  2566789999999888899999999


Q ss_pred             ccEEEEeccCCCCccccc---------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-
Q psy8758          68 FNLYSYDIRQLNSPLNVH---------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-  131 (198)
Q Consensus        68 ~~i~~~d~~~~~~~~~~~---------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-  131 (198)
                      .++++||..+.+......               ....+++|..+-+|++.|+.+ +..-..+.+|.+.|.++.|+|... 
T Consensus       124 htlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S-Gs~sH~LsGHr~~vlaV~Wsp~~e~  202 (397)
T KOG4283|consen  124 HTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS-GSFSHTLSGHRDGVLAVEWSPSSEW  202 (397)
T ss_pred             ceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccC-CcceeeeccccCceEEEEeccCcee
Confidence            999999998765432211               124688999999999999999 888999999999999999999887 


Q ss_pred             EEEEeecCCcEEEEEcCCC-ceeeE-------------EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         132 EFVAGGYDKSLRLYLAHQG-HSRDI-------------YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       132 ~l~~~~~d~~v~v~d~~~~-~~~~~-------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .|++|+.||.|++||++.. .+...             ....|.+.+.+++|+.++.++++++.|..+++|+...|+.
T Consensus       203 vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n  280 (397)
T KOG4283|consen  203 VLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN  280 (397)
T ss_pred             EEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence            5688999999999999853 11111             1346788999999999999999999999999999988763

>KOG0316|consensus

Probab=99.96  E-value=4.2e-27  Score=153.09  Aligned_cols=187  Identities=21%  Similarity=0.268  Sum_probs=153.2

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC---
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN---   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~---   79 (198)
                      +|.+++.+.|...+++++.|..+.+||+++|+..+.++.|  ...|+.+.|+.+...++ +|+.|..+++||.++..   
T Consensus        61 EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH--~aqVNtV~fNeesSVv~-SgsfD~s~r~wDCRS~s~eP  137 (307)
T KOG0316|consen   61 EVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGH--LAQVNTVRFNEESSVVA-SGSFDSSVRLWDCRSRSFEP  137 (307)
T ss_pred             eeeeccccccccccccCCCCceEEEEEcccCeeeeecccc--cceeeEEEecCcceEEE-eccccceeEEEEcccCCCCc
Confidence            5778888999999999999999999999999988888875  77899999998766655 57899999999998543   


Q ss_pred             -Ccccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          80 -SPLNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        80 -~~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                       +.+....         +..+++|+.||+++.||++. +......  ...+|++++|+||++..+.++.|+++++.|-.+
T Consensus       138 iQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~-G~l~sDy--~g~pit~vs~s~d~nc~La~~l~stlrLlDk~t  214 (307)
T KOG0316|consen  138 IQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRK-GTLSSDY--FGHPITSVSFSKDGNCSLASSLDSTLRLLDKET  214 (307)
T ss_pred             cchhhhhcCceeEEEecccEEEeeccCCcEEEEEeec-ceeehhh--cCCcceeEEecCCCCEEEEeeccceeeecccch
Confidence             2222222         23589999999999999997 4443333  456899999999999999999999999999999


Q ss_pred             CceeeEEeccCcccE--EEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         150 GHSRDIYHTKRMQHV--THTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+.+..+ .+|...-  ...+++.....+++|++||.|++||+.....+
T Consensus       215 GklL~sY-kGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~  262 (307)
T KOG0316|consen  215 GKLLKSY-KGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQI  262 (307)
T ss_pred             hHHHHHh-cccccceeeeeeeecccceeEEeccCCceEEEEEeccceee
Confidence            9999887 6776543  34556666778999999999999999876654

>KOG0772|consensus

Probab=99.95  E-value=4.1e-27  Score=167.88  Aligned_cols=192  Identities=15%  Similarity=0.210  Sum_probs=149.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc----eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE----KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|.++++.|.|-+|++|+.|..|++||++...    ..+.+.. .....|+++.|++.+..|++. +.....+++|-..
T Consensus       168 k~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P-~E~h~i~sl~ys~Tg~~iLvv-sg~aqakl~DRdG  245 (641)
T KOG0772|consen  168 KIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP-CETHQINSLQYSVTGDQILVV-SGSAQAKLLDRDG  245 (641)
T ss_pred             eEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCc-ccccccceeeecCCCCeEEEE-ecCcceeEEccCC
Confidence            568999999999999999999999999997432    1222222 245578999999999988876 4667788887542


Q ss_pred             CCC--------------------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecC-----CCcceEEEEE
Q psy8758          78 LNS--------------------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-----MTSAVTSVDY  126 (198)
Q Consensus        78 ~~~--------------------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~~i~~~~~  126 (198)
                      ...                          .+.+.....+++++.||++++||+....+.++.++.     ..-+++.++|
T Consensus       246 ~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~  325 (641)
T KOG0772|consen  246 FEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAW  325 (641)
T ss_pred             ceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeec
Confidence            110                          112223356999999999999999886666666643     2346899999


Q ss_pred             ccCCCEEEEeecCCcEEEEEcCCCce--eeEEeccCcc--cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         127 SPTGREFVAGGYDKSLRLYLAHQGHS--RDIYHTKRMQ--HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       127 sp~~~~l~~~~~d~~v~v~d~~~~~~--~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|||+++|+|..||.|.+|+......  ...+...|..  .|+++.||+||++|++-+.|+++++||+++.++
T Consensus       326 nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk  398 (641)
T KOG0772|consen  326 NRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK  398 (641)
T ss_pred             CCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence            99999999999999999999865433  3334567765  899999999999999999999999999987654

>KOG0292|consensus

Probab=99.95  E-value=5.9e-27  Score=176.35  Aligned_cols=192  Identities=16%  Similarity=0.261  Sum_probs=161.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ++|..++|+|++.++++|++|-.|++|+..+.+++.++..  |-.-|..+.|++.-++|+++ |+|.+|++|+..+.+  
T Consensus        52 GpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~G--HlDYVRt~~FHheyPWIlSA-SDDQTIrIWNwqsr~~i  128 (1202)
T KOG0292|consen   52 GPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLG--HLDYVRTVFFHHEYPWILSA-SDDQTIRIWNWQSRKCI  128 (1202)
T ss_pred             CccceeeecCCCCeEEecCCccEEEEEecccceehhhhcc--ccceeEEeeccCCCceEEEc-cCCCeEEEEeccCCceE
Confidence            7899999999999999999999999999998887766665  46779999999999999885 799999999987654  


Q ss_pred             CccccccC-----------ceEEEecCCCcEEEEEccCC-------C---------------------cceeeecCCCcc
Q psy8758          80 SPLNVHKD-----------MTSAAANEDFNLYSYDIRQL-------N---------------------SPLNVHKDMTSA  120 (198)
Q Consensus        80 ~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~-------~---------------------~~~~~~~~~~~~  120 (198)
                      ..+.+|..           ..+++++-|-+|++||+...       +                     -....+++|...
T Consensus       129 avltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRG  208 (1202)
T KOG0292|consen  129 AVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRG  208 (1202)
T ss_pred             EEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccc
Confidence            34555543           46899999999999997521       1                     012356789999


Q ss_pred             eEEEEEccCCCEEEEeecCCcEEEEEcCCCceee-EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD-IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+-++|+|.-..+++|+.|..|++|.+...+.-. ....+|...|.++-|+|...++++.++|++|++||+.....+
T Consensus       209 VNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v  285 (1202)
T KOG0292|consen  209 VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSV  285 (1202)
T ss_pred             cceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccce
Confidence            9999999999999999999999999998765432 234789999999999999999999999999999999765543

>KOG0293|consensus

Probab=99.95  E-value=1.9e-27  Score=165.47  Aligned_cols=187  Identities=14%  Similarity=0.262  Sum_probs=146.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      .+|.-+.||||.+++++++.|..+.+||+.++.....+... +...+.+++|.||+..+++ |+.|+.|..||+..... 
T Consensus       270 ~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~-~~~S~~sc~W~pDg~~~V~-Gs~dr~i~~wdlDgn~~~  347 (519)
T KOG0293|consen  270 QPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSG-LGFSVSSCAWCPDGFRFVT-GSPDRTIIMWDLDGNILG  347 (519)
T ss_pred             CceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccC-cCCCcceeEEccCCceeEe-cCCCCcEEEecCCcchhh
Confidence            57899999999999999999999999999999876665543 4577899999999999765 78999999999863220 


Q ss_pred             cccc-------------------------------------------c----------cCceEEEecCCCcEEEEEccCC
Q psy8758          81 PLNV-------------------------------------------H----------KDMTSAAANEDFNLYSYDIRQL  107 (198)
Q Consensus        81 ~~~~-------------------------------------------~----------~~~~~~~~~~~~~i~~~d~~~~  107 (198)
                      .+++                                           +          .+.++++--.+..+++||++. 
T Consensus       348 ~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e-  426 (519)
T KOG0293|consen  348 NWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEE-  426 (519)
T ss_pred             cccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecch-
Confidence            0000                                           0          011234444566688899986 


Q ss_pred             CcceeeecCCCcce--EEEEEcc-CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEecCCC
Q psy8758         108 NSPLNVHKDMTSAV--TSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEM  183 (198)
Q Consensus       108 ~~~~~~~~~~~~~i--~~~~~sp-~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg  183 (198)
                      ...+..+.+|+..-  -.-+|-- +..++++|+.|+.|+||+..+++++..+ .+|...|++++|+| +..++|++++||
T Consensus       427 ~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L-sGHs~~vNcVswNP~~p~m~ASasDDg  505 (519)
T KOG0293|consen  427 NKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL-SGHSKTVNCVSWNPADPEMFASASDDG  505 (519)
T ss_pred             hhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee-cCCcceeeEEecCCCCHHHhhccCCCC
Confidence            56777777776542  2234433 4479999999999999999999999988 89999999999999 456899999999


Q ss_pred             eEEEEecCC
Q psy8758         184 NLRVWKAHA  192 (198)
Q Consensus       184 ~v~~w~~~~  192 (198)
                      +|+||....
T Consensus       506 tIRIWg~~~  514 (519)
T KOG0293|consen  506 TIRIWGPSD  514 (519)
T ss_pred             eEEEecCCc
Confidence            999998764

>KOG0288|consensus

Probab=99.95  E-value=2.6e-27  Score=164.48  Aligned_cols=190  Identities=19%  Similarity=0.257  Sum_probs=158.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ++|+.++|.++++.+++++.|+.+++|++...+...++..  |.+.|+++.|...... +++|+.|.+|++||+....  
T Consensus       220 g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsG--HtdkVt~ak~~~~~~~-vVsgs~DRtiK~WDl~k~~C~  296 (459)
T KOG0288|consen  220 GNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSG--HTDKVTAAKFKLSHSR-VVSGSADRTIKLWDLQKAYCS  296 (459)
T ss_pred             CCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcc--cccceeeehhhccccc-eeeccccchhhhhhhhhhhee
Confidence            5799999999999999999999999999998887777776  5888999999877666 5568999999999997532  


Q ss_pred             -Cccccc-------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc
Q psy8758          80 -SPLNVH-------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus        80 -~~~~~~-------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                       ..+...       ....++++..|++|++||.+. ..+....+.+. .|+++..++++..+.+++.|.++.++|+++.+
T Consensus       297 kt~l~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs-~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~e  374 (459)
T KOG0288|consen  297 KTVLPGSQCNDIVCSISDVISGHFDKKVRFWDIRS-ADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKE  374 (459)
T ss_pred             ccccccccccceEecceeeeecccccceEEEeccC-CceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeeccccc
Confidence             112111       134578999999999999998 57777776554 89999999999999999999999999999988


Q ss_pred             eeeEEecc---CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         152 SRDIYHTK---RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       152 ~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ....+...   .....+.+.|||++.|+++|+.||.|+||++.++++.
T Consensus       375 I~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE  422 (459)
T KOG0288|consen  375 IRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLE  422 (459)
T ss_pred             EEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEE
Confidence            77766211   1245888999999999999999999999999999864

>KOG0264|consensus

Probab=99.95  E-value=2e-26  Score=161.54  Aligned_cols=191  Identities=17%  Similarity=0.247  Sum_probs=148.8

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceee--------eeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLG--------PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      +.|+.+..-|+. ..+|+.+..+.+.|||........        .++-..|...-.+++|++...-.+.+++.|+.|++
T Consensus       125 gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~l  204 (422)
T KOG0264|consen  125 GEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICL  204 (422)
T ss_pred             ccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcEEE
Confidence            567888888855 577778889999999986332111        11222345556789999988777777889999999


Q ss_pred             EeccCCCC---------cccccc------------CceEEEecCCCcEEEEEccC-CCcceeeecCCCcceEEEEEccC-
Q psy8758          73 YDIRQLNS---------PLNVHK------------DMTSAAANEDFNLYSYDIRQ-LNSPLNVHKDMTSAVTSVDYSPT-  129 (198)
Q Consensus        73 ~d~~~~~~---------~~~~~~------------~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~sp~-  129 (198)
                      ||+.....         .+.+|.            ...+++++.|+.+.+||+|+ ..++.....+|..+++|++|+|- 
T Consensus       205 wdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~  284 (422)
T KOG0264|consen  205 WDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFN  284 (422)
T ss_pred             EeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCC
Confidence            99974332         233333            34699999999999999995 35667777899999999999996 


Q ss_pred             CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCC
Q psy8758         130 GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~  192 (198)
                      +..||+|+.|++|++||++.-........+|...|..+.|||... .||+++.|+.+.+||+..
T Consensus       285 ~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~  348 (422)
T KOG0264|consen  285 EFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSR  348 (422)
T ss_pred             CceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence            457889999999999999986554444479999999999999765 788899999999999964

>KOG0268|consensus

Probab=99.95  E-value=8.7e-28  Score=164.63  Aligned_cols=152  Identities=52%  Similarity=0.841  Sum_probs=135.7

Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-------------ccccccCceEEEecCCCcEEEEEccCCCcce
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPL  111 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~  111 (198)
                      ...+.++.|+|....+++++..|+.|.+||+++...             .+++ ....+.++++|..++.+|++....++
T Consensus       187 ~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF~~a~ED~nlY~~DmR~l~~p~  265 (433)
T KOG0268|consen  187 ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNFVAANEDHNLYTYDMRNLSRPL  265 (433)
T ss_pred             CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCc-cccceeeccccccceehhhhhhcccc
Confidence            345789999999998888888999999999986542             2333 45678999999999999999989999


Q ss_pred             eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         112 NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       112 ~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ....+|.+.+.+++|||.|+.+++|+.|.+|+||..+.+.....++....+.|.++.||.|.+++++||+|+.|++|...
T Consensus       266 ~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~  345 (433)
T KOG0268|consen  266 NVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAK  345 (433)
T ss_pred             hhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecc
Confidence            99999999999999999999999999999999999999999888877778899999999999999999999999999988


Q ss_pred             CCcccc
Q psy8758         192 ASEKLE  197 (198)
Q Consensus       192 ~~~~~~  197 (198)
                      ..+.++
T Consensus       346 Aseklg  351 (433)
T KOG0268|consen  346 ASEKLG  351 (433)
T ss_pred             hhhhcC
Confidence            766654

>KOG0281|consensus

Probab=99.95  E-value=1e-27  Score=164.01  Aligned_cols=184  Identities=14%  Similarity=0.260  Sum_probs=152.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..|+|+.+  |...+++|..|++|++||..+-.+...+..  |.+.|.|+.|..   .++++|+.|.+|++||.++... 
T Consensus       198 kgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~G--HtGSVLCLqyd~---rviisGSSDsTvrvWDv~tge~l  270 (499)
T KOG0281|consen  198 KGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTG--HTGSVLCLQYDE---RVIVSGSSDSTVRVWDVNTGEPL  270 (499)
T ss_pred             CceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhc--CCCcEEeeeccc---eEEEecCCCceEEEEeccCCchh
Confidence            45777777  456899999999999999988777666655  588899998863   3666789999999999987653 


Q ss_pred             -cccccc---------CceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVHK---------DMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+-.|.         +.++++++.|.++.+||+..+.  .....+.+|...|+.+.|+  .+++++++.|.+|++|++.
T Consensus       271 ~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~s  348 (499)
T KOG0281|consen  271 NTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS  348 (499)
T ss_pred             hHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEecc
Confidence             344443         3568999999999999998743  2335667899999999995  5699999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +++.+..+ .+|...|.++.+  .++++++|+.|++|++||+..|.+++
T Consensus       349 t~efvRtl-~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLR  394 (499)
T KOG0281|consen  349 TCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR  394 (499)
T ss_pred             ceeeehhh-hcccccceehhc--cCeEEEecCCCceEEEEeccccHHHH
Confidence            99999887 688888887766  68899999999999999999998864

>KOG0285|consensus

Probab=99.95  E-value=6.7e-27  Score=160.26  Aligned_cols=187  Identities=14%  Similarity=0.231  Sum_probs=162.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|..+++|+--.|+++++.|+.|+.||++..+.++.+..  |-..|.+++.+|.-..+++ |+.|..+++||+++... 
T Consensus       194 ~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhG--HlS~V~~L~lhPTldvl~t-~grDst~RvWDiRtr~~V  270 (460)
T KOG0285|consen  194 ETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHG--HLSGVYCLDLHPTLDVLVT-GGRDSTIRVWDIRTRASV  270 (460)
T ss_pred             heeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhcc--ccceeEEEeccccceeEEe-cCCcceEEEeeecccceE
Confidence            4578999999999999999999999999998887666654  5678999999999888876 56999999999997654 


Q ss_pred             -ccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+.+|..           +.+++|+.|++|++||++. ++....+..|+..+.+++.+|....+|+++.|+ |+-|++.
T Consensus       271 ~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~a-gkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p  348 (460)
T KOG0285|consen  271 HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRA-GKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLP  348 (460)
T ss_pred             EEecCCCCcceeEEeecCCCceEEecCCceEEEeeecc-CceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCC
Confidence             3455554           4589999999999999999 788888899999999999999999999998876 9999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .+..+..+ .+|...++.++...|+ ++++|+++|.+..||.++|-.
T Consensus       349 ~g~f~~nl-sgh~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~n  393 (460)
T KOG0285|consen  349 EGEFLQNL-SGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHN  393 (460)
T ss_pred             ccchhhcc-ccccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcc
Confidence            99988885 7899999999998886 567899999999999998764

>KOG0646|consensus

Probab=99.95  E-value=2.4e-26  Score=161.83  Aligned_cols=190  Identities=15%  Similarity=0.187  Sum_probs=158.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|.+++-+|+|.+++.|+..|.+++|.+.+|..+..+..  |-..|+++.|+.|+.++++ |+.||.|.+|.+-.... 
T Consensus        82 g~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~a--HYQ~ITcL~fs~dgs~iiT-gskDg~V~vW~l~~lv~a  158 (476)
T KOG0646|consen   82 GPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSA--HYQSITCLKFSDDGSHIIT-GSKDGAVLVWLLTDLVSA  158 (476)
T ss_pred             cceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHh--hccceeEEEEeCCCcEEEe-cCCCccEEEEEEEeeccc
Confidence            5799999999999999998999999999999998877754  5788999999999999987 57999999998753221 


Q ss_pred             ----------ccccc-------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee
Q psy8758          81 ----------PLNVH-------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        81 ----------~~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                                .+..|             ....+++.+.|.++++||+.. +..+..+. .+..+.+++.+|-++.+..|+
T Consensus       159 ~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~-g~LLlti~-fp~si~av~lDpae~~~yiGt  236 (476)
T KOG0646|consen  159 DNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSL-GVLLLTIT-FPSSIKAVALDPAERVVYIGT  236 (476)
T ss_pred             ccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecc-ceeeEEEe-cCCcceeEEEcccccEEEecC
Confidence                      12222             234699999999999999998 66666664 577899999999999999999


Q ss_pred             cCCcEEEEEcCCCc----------------eeeEEeccCcc--cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         138 YDKSLRLYLAHQGH----------------SRDIYHTKRMQ--HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       138 ~d~~v~v~d~~~~~----------------~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .+|.|.+.++....                .... ..+|..  .|++++.+-||..|++|+.||.|.|||+.+.++++
T Consensus       237 ~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~-~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iR  313 (476)
T KOG0646|consen  237 EEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINV-LVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIR  313 (476)
T ss_pred             CcceEEeeehhcCCcccccccccccccccceeee-eccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHH
Confidence            99999998876422                1122 256766  99999999999999999999999999999888764

>PTZ00421 coronin; Provisional

Probab=99.95  E-value=1.9e-25  Score=166.42  Aligned_cols=188  Identities=18%  Similarity=0.244  Sum_probs=141.1

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-----------eeeeecCceeeEEeCC-CCCeEEEEecCCccEE
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-----------RKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLY   71 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~   71 (198)
                      |+....++++..+++++.+.....|+...+.....+           ....|.+.|.+++|+| ++..+++ ++.|+.|+
T Consensus        23 i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaS-gS~DgtIk  101 (493)
T PTZ00421         23 VTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFT-ASEDGTIM  101 (493)
T ss_pred             cccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEE-EeCCCEEE
Confidence            445556677766777777777777775433221100           1123678899999999 6666654 67999999


Q ss_pred             EEeccCCC---------Cccccc----------c--CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC
Q psy8758          72 SYDIRQLN---------SPLNVH----------K--DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        72 ~~d~~~~~---------~~~~~~----------~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~  130 (198)
                      +||+....         ..+.+|          +  ..++++++.|++|++||+++ +..+..+..|...|.+++|+|+|
T Consensus       102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~t-g~~~~~l~~h~~~V~sla~spdG  180 (493)
T PTZ00421        102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVER-GKAVEVIKCHSDQITSLEWNLDG  180 (493)
T ss_pred             EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCC-CeEEEEEcCCCCceEEEEEECCC
Confidence            99986431         112223          2  25799999999999999998 67788888899999999999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcc-cEEEEEEcCCCCEEEEec----CCCeEEEEecCCCc
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ-HVTHTVWSLDNKFVISAS----DEMNLRVWKAHASE  194 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~----~dg~v~~w~~~~~~  194 (198)
                      ++|++++.|+.|++||+++++.+..+ .+|.+ .+..+.|.+++..+++++    .|+.|++||+++.+
T Consensus       181 ~lLatgs~Dg~IrIwD~rsg~~v~tl-~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~  248 (493)
T PTZ00421        181 SLLCTTSKDKKLNIIDPRDGTIVSSV-EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA  248 (493)
T ss_pred             CEEEEecCCCEEEEEECCCCcEEEEE-ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence            99999999999999999999887766 45654 345778999888777653    47999999998654

>KOG0296|consensus

Probab=99.95  E-value=7.6e-26  Score=155.08  Aligned_cols=182  Identities=13%  Similarity=0.196  Sum_probs=152.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.=+.|+|.+..|+.|+.||.+-+|.+.++...+.+..  |..++++=.|.|+|+++++ +..||+|++||..+.....
T Consensus       150 dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~G--h~~~ct~G~f~pdGKr~~t-gy~dgti~~Wn~ktg~p~~  226 (399)
T KOG0296|consen  150 DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSG--HNSPCTCGEFIPDGKRILT-GYDDGTIIVWNPKTGQPLH  226 (399)
T ss_pred             ceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecC--CCCCcccccccCCCceEEE-EecCceEEEEecCCCceeE
Confidence            344577899999999999999999999988654455544  6788999999999999986 5789999999998654221


Q ss_pred             ccc------------------------------------------cC-------------------------ceEEEecC
Q psy8758          83 NVH------------------------------------------KD-------------------------MTSAAANE   95 (198)
Q Consensus        83 ~~~------------------------------------------~~-------------------------~~~~~~~~   95 (198)
                      ...                                          .+                         ++.+.|+-
T Consensus       227 ~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v  306 (399)
T KOG0296|consen  227 KITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV  306 (399)
T ss_pred             EecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc
Confidence            100                                          00                         23778899


Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCE
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF  175 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  175 (198)
                      ||+|.+||+..  ..++.+-.|..+|..+.|-+ ..+|++++.+|.|+.||.++|+++..+ .+|...|.+++.+|+.++
T Consensus       307 dG~i~iyD~a~--~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y-~GH~~~Il~f~ls~~~~~  382 (399)
T KOG0296|consen  307 DGTIAIYDLAA--STLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTY-TGHQMGILDFALSPQKRL  382 (399)
T ss_pred             cceEEEEeccc--chhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEE-ecCchheeEEEEcCCCcE
Confidence            99999999986  44555566899999999998 789999999999999999999999988 799999999999999999


Q ss_pred             EEEecCCCeEEEEecC
Q psy8758         176 VISASDEMNLRVWKAH  191 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~  191 (198)
                      +++++.|++.+||++.
T Consensus       383 vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  383 VVTVSDDNTALVFEVP  398 (399)
T ss_pred             EEEecCCCeEEEEecC
Confidence            9999999999999875

>KOG2096|consensus

Probab=99.95  E-value=5.1e-26  Score=153.98  Aligned_cols=187  Identities=18%  Similarity=0.246  Sum_probs=148.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|++++|+.||++|++++.|+.|++|++.+-.  .-+.++..-.-+..+.+.|+||.+.++++.-....+++|.+....
T Consensus        87 ~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~  166 (420)
T KOG2096|consen   87 KEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKT  166 (420)
T ss_pred             CceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeecc
Confidence            579999999999999999999999999997532  112222222223457899999999888877777889999875322


Q ss_pred             C---cc-----c-----------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE
Q psy8758          80 S---PL-----N-----------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV  134 (198)
Q Consensus        80 ~---~~-----~-----------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~  134 (198)
                      .   ++     .                 .....++++++.|..|.+|+++  ++.+..+...+..-+..+.||+|++++
T Consensus       167 dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk--Gq~L~~idtnq~~n~~aavSP~GRFia  244 (420)
T KOG2096|consen  167 DGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK--GQLLQSIDTNQSSNYDAAVSPDGRFIA  244 (420)
T ss_pred             cCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC--CceeeeeccccccccceeeCCCCcEEE
Confidence            1   00     0                 1123468999999999999999  688888888888888899999999999


Q ss_pred             EeecCCcEEEEEcCC---Cc-----eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         135 AGGYDKSLRLYLAHQ---GH-----SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~---~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +++..-.|++|..--   |+     .... ..+|...|..++|+++++.+++.+.||+.++||.+
T Consensus       245 ~~gFTpDVkVwE~~f~kdG~fqev~rvf~-LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd  308 (420)
T KOG2096|consen  245 VSGFTPDVKVWEPIFTKDGTFQEVKRVFS-LKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD  308 (420)
T ss_pred             EecCCCCceEEEEEeccCcchhhhhhhhe-eccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence            999999999998742   22     1222 37999999999999999999999999999999985

>KOG0643|consensus

Probab=99.95  E-value=1.2e-25  Score=148.64  Aligned_cols=192  Identities=17%  Similarity=0.216  Sum_probs=161.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++++.+.++.+|.+|.+++.|....+|-..+|+.+-++..  |.+.|.++..+.+.+.+++ |+.|.++++||+++.+..
T Consensus        11 RplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~G--HtGavW~~Did~~s~~liT-GSAD~t~kLWDv~tGk~l   87 (327)
T KOG0643|consen   11 RPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDG--HTGAVWCCDIDWDSKHLIT-GSADQTAKLWDVETGKQL   87 (327)
T ss_pred             cccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecC--CCceEEEEEecCCcceeee-ccccceeEEEEcCCCcEE
Confidence            5799999999999999999999999999888888777766  5888999999998888875 789999999999988754


Q ss_pred             ccccc-----------C-ceEEEe-----cCCCcEEEEEccCC------CcceeeecCCCcceEEEEEccCCCEEEEeec
Q psy8758          82 LNVHK-----------D-MTSAAA-----NEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        82 ~~~~~-----------~-~~~~~~-----~~~~~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      .....           + .+++..     +..+.|.++|++..      ..|...+..+.+.++.+-|+|-+++|++|..
T Consensus        88 a~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe  167 (327)
T KOG0643|consen   88 ATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHE  167 (327)
T ss_pred             EEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecC
Confidence            33221           1 222222     23467899999832      3567778888899999999999999999999


Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ||.|.+||+++++........|...|+.+.++||..++++++.|.+-++||+.+-+.+
T Consensus       168 ~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~  225 (327)
T KOG0643|consen  168 DGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVL  225 (327)
T ss_pred             CCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeE
Confidence            9999999999997766666788899999999999999999999999999999887654

>PTZ00420 coronin; Provisional

Probab=99.95  E-value=8.4e-25  Score=164.11  Aligned_cols=169  Identities=11%  Similarity=0.148  Sum_probs=127.2

Q ss_pred             eeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC----------ccccccC-
Q psy8758          19 ASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS----------PLNVHKD-   87 (198)
Q Consensus        19 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~----------~~~~~~~-   87 (198)
                      |+.++.+++|+.........+.  .|...|.+++|+|+...++++|+.|+.|++||+.....          .+.+|.. 
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~--gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~  127 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLK--GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK  127 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEc--CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence            4567788999876544333333  36788999999998544455578999999999875311          1233322 


Q ss_pred             -----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758          88 -----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus        88 -----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                                 .++++++.|+.|++||+++ ++....+. +...|.+++|+|+|++|++++.|+.|++||+++++.+..+
T Consensus       128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~t-g~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl  205 (568)
T PTZ00420        128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIEN-EKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF  205 (568)
T ss_pred             EEEEEECCCCCeEEEEEeCCCeEEEEECCC-CcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence                       3467899999999999998 45555554 5678999999999999999999999999999999888766


Q ss_pred             eccCcccEE-----EEEEcCCCCEEEEecCCC----eEEEEecCC
Q psy8758         157 HTKRMQHVT-----HTVWSLDNKFVISASDEM----NLRVWKAHA  192 (198)
Q Consensus       157 ~~~~~~~v~-----~~~~s~~~~~l~~~~~dg----~v~~w~~~~  192 (198)
                       .+|.+.+.     ...|++++.+|++++.|+    .|++||+++
T Consensus       206 -~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~  249 (568)
T PTZ00420        206 -HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN  249 (568)
T ss_pred             -ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence             56765432     334568999999877664    799999985

>KOG0283|consensus

Probab=99.94  E-value=1.4e-25  Score=167.58  Aligned_cols=191  Identities=19%  Similarity=0.284  Sum_probs=146.0

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCc----------------------------e-----------------
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE----------------------------K-----------------   35 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----------------------------~-----------------   35 (198)
                      .++|.++.||+||+|||+|+.|+.|+||.+...+                            .                 
T Consensus       267 ~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~s~  346 (712)
T KOG0283|consen  267 KGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQSP  346 (712)
T ss_pred             CCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccCCc
Confidence            3789999999999999999999999999875500                            0                 


Q ss_pred             ------------eeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-------------ccccccCce
Q psy8758          36 ------------LGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-------------PLNVHKDMT   89 (198)
Q Consensus        36 ------------~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-------------~~~~~~~~~   89 (198)
                                  ..++.. ..|...|..+.|+.+ .+|++ ++.|.++++|++.....             .+.+-.+.+
T Consensus       347 ~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLS-SSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDry  424 (712)
T KOG0283|consen  347 CVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLS-SSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRY  424 (712)
T ss_pred             cccCCCccccccccchhhhhccchhheecccccC-CeeEe-ccccccEEeecCCCcceeeEEecCCeeEEEEecccCCCc
Confidence                        000011 125667889999975 45555 47999999999985432             244456678


Q ss_pred             EEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEec--------cCc
Q psy8758          90 SAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT--------KRM  161 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~--------~~~  161 (198)
                      +++|+-|+++++|++..  ..+.....-..-|++++|.|||++.+.|+.+|.+++|+....+.......        .| 
T Consensus       425 FiSGSLD~KvRiWsI~d--~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~-  501 (712)
T KOG0283|consen  425 FISGSLDGKVRLWSISD--KKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQG-  501 (712)
T ss_pred             EeecccccceEEeecCc--CeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccC-
Confidence            99999999999999986  44444455568899999999999999999999999999998776554411        12 


Q ss_pred             ccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCccc
Q psy8758         162 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 ~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..|+++.|.|.. ..+++.+.|..|+|+|.++.+++
T Consensus       502 ~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv  537 (712)
T KOG0283|consen  502 KRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLV  537 (712)
T ss_pred             ceeeeeEecCCCCCeEEEecCCCceEEEeccchhhh
Confidence            379999999843 35666778999999999766554

>KOG0647|consensus

Probab=99.94  E-value=2.6e-25  Score=149.20  Aligned_cols=193  Identities=16%  Similarity=0.232  Sum_probs=142.1

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..|.+++||| ....+++++.|++||+|+++.......-....+.++|.+++|+.+|..+++ |+.|+.+++||+.+...
T Consensus        28 DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~-g~~Dk~~k~wDL~S~Q~  106 (347)
T KOG0647|consen   28 DSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFS-GGCDKQAKLWDLASGQV  106 (347)
T ss_pred             cchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEe-eccCCceEEEEccCCCe
Confidence            4689999999 445666899999999999986422222223347899999999999988877 56899999999987653


Q ss_pred             -ccccccC-------------ceEEEecCCCcEEEEEccCCCcceeee--------------------------------
Q psy8758          81 -PLNVHKD-------------MTSAAANEDFNLYSYDIRQLNSPLNVH--------------------------------  114 (198)
Q Consensus        81 -~~~~~~~-------------~~~~~~~~~~~i~~~d~~~~~~~~~~~--------------------------------  114 (198)
                       .+..|..             .++++|+.|.+|+.||+++. .++.++                                
T Consensus       107 ~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~-~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n  185 (347)
T KOG0647|consen  107 SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSS-NPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLEN  185 (347)
T ss_pred             eeeeecccceeEEEEecCCCcceeEecccccceeecccCCC-CeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCC
Confidence             2333332             35899999999999999973 322211                                


Q ss_pred             -----cCC----CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce--eeEEeccC--------cccEEEEEEcCCCCE
Q psy8758         115 -----KDM----TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS--RDIYHTKR--------MQHVTHTVWSLDNKF  175 (198)
Q Consensus       115 -----~~~----~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~--~~~~~~~~--------~~~v~~~~~s~~~~~  175 (198)
                           +.+    +-.++|++..+|....+.|+-+|.+.+..+..+.+  -+.+....        --.|++++|+|.-..
T Consensus       186 ~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgt  265 (347)
T KOG0647|consen  186 PPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGT  265 (347)
T ss_pred             CcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccce
Confidence                 111    12368888888888889999999999998887632  23331111        125889999999899


Q ss_pred             EEEecCCCeEEEEecCCCccc
Q psy8758         176 VISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+|++.||++.+||-+...+|
T Consensus       266 lvTaGsDGtf~FWDkdar~kL  286 (347)
T KOG0647|consen  266 LVTAGSDGTFSFWDKDARTKL  286 (347)
T ss_pred             EEEecCCceEEEecchhhhhh
Confidence            999999999999998765544

>KOG0299|consensus

Probab=99.94  E-value=4.1e-25  Score=155.41  Aligned_cols=186  Identities=15%  Similarity=0.223  Sum_probs=156.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ..+.+++.|+||++|++|+.|..|.||+.++.+..+.+..  |.+.|.+++|-.....++++ +.|+.+++|++.+..  
T Consensus       203 keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~g--hr~~V~~L~fr~gt~~lys~-s~Drsvkvw~~~~~s~v  279 (479)
T KOG0299|consen  203 KEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKG--HRGAVSSLAFRKGTSELYSA-SADRSVKVWSIDQLSYV  279 (479)
T ss_pred             ceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccc--cccceeeeeeecCccceeee-ecCCceEEEehhHhHHH
Confidence            4688999999999999999999999999999887777655  57889999998877777764 699999999998654  


Q ss_pred             CccccccCc-----------eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          80 SPLNVHKDM-----------TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        80 ~~~~~~~~~-----------~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..+-+|++.           ++.+|+.|+++++|++..  .....+.++.+.+.|++|-. ...+++|+.+|.|.+|++.
T Consensus       280 etlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e--esqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~  356 (479)
T KOG0299|consen  280 ETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE--ESQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLL  356 (479)
T ss_pred             HHHhCCccceeeechhcccceEEeccccceeEEEeccc--cceeeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeec
Confidence            345556553           466777999999999954  44556677888999999974 4679999999999999999


Q ss_pred             CCceeeEEeccCc-----------ccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         149 QGHSRDIYHTKRM-----------QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       149 ~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +.++++....+|.           .+|++++..|...++|+|+.+|.|++|.+.++
T Consensus       357 KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g  412 (479)
T KOG0299|consen  357 KKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG  412 (479)
T ss_pred             ccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence            9999888755552           28999999999999999999999999999877

>KOG0313|consensus

Probab=99.94  E-value=5.7e-25  Score=151.54  Aligned_cols=186  Identities=17%  Similarity=0.271  Sum_probs=146.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-----e-----------------eeee-eeeeecCceeeEEeCCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-----K-----------------LGPI-RKVVMSLRSNMVSWNPMEA   58 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-----~-----------------~~~~-~~~~~~~~v~~~~~~~~~~   58 (198)
                      ++|-+++..++|..+++|+.|..+.+|+..+..     .                 -.++ ....|..+|.++.|++ ..
T Consensus       194 ~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~  272 (423)
T KOG0313|consen  194 RSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-AT  272 (423)
T ss_pred             cceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CC
Confidence            468899999999999999999999999932110     0                 0111 1123788999999998 44


Q ss_pred             eEEEEecCCccEEEEeccCCCCccc------------cccCceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEE
Q psy8758          59 FVFTAANEDFNLYSYDIRQLNSPLN------------VHKDMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSV  124 (198)
Q Consensus        59 ~~~~~~~~d~~i~~~d~~~~~~~~~------------~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~  124 (198)
                      .++ +++.|.+|+.||+.+......            ......+++|+.|..+++||.++..  -+.+++.+|+..|.++
T Consensus       273 v~y-S~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssv  351 (423)
T KOG0313|consen  273 VIY-SVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSV  351 (423)
T ss_pred             ceE-eecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhhe
Confidence            444 468999999999986543211            1133578999999999999999743  3456778999999999


Q ss_pred             EEccCCC-EEEEeecCCcEEEEEcCCCc-eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         125 DYSPTGR-EFVAGGYDKSLRLYLAHQGH-SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       125 ~~sp~~~-~l~~~~~d~~v~v~d~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .|+|... .|++++.|+++++||+++.. ++..+ .+|...|.++.|+ ++..+++|+.|++++++.-.
T Consensus       352 kwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI-~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  352 KWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI-AGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             ecCCCCceEEEEEecCCeEEEEEeccCCCcceee-ccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence            9999766 67899999999999999987 66666 7899999999998 46689999999999998653

>KOG0640|consensus

Probab=99.94  E-value=1.5e-25  Score=151.34  Aligned_cols=188  Identities=16%  Similarity=0.245  Sum_probs=153.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+|+++.|+|....|++|+.|++|++||+......+.++.+....+|.++.|+|.|.++++ |.+-..+++||+.+.+.-
T Consensus       173 devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllv-gTdHp~~rlYdv~T~Qcf  251 (430)
T KOG0640|consen  173 DEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLV-GTDHPTLRLYDVNTYQCF  251 (430)
T ss_pred             CcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEE-ecCCCceeEEeccceeEe
Confidence            5799999999999999999999999999976554455555556778999999999999987 567789999999865422


Q ss_pred             c-----ccc-----------cCceEEEecCCCcEEEEEccCCCcceeeec-CC-CcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          82 L-----NVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DM-TSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        82 ~-----~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~-~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      +     ..|           .+.+.++++.||.|++||--+ .+++.++. .| ...|.+..|..+|+++++++.|..++
T Consensus       252 vsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS-~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vk  330 (430)
T KOG0640|consen  252 VSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVS-NRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVK  330 (430)
T ss_pred             eecCcccccccceeEEEecCCccEEEEeccCCcEEeecccc-HHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceee
Confidence            1     122           235689999999999999766 57777774 34 35689999999999999999999999


Q ss_pred             EEEcCCCceeeEEec------------------------------------------------cCcccEEEEEEcCCCCE
Q psy8758         144 LYLAHQGHSRDIYHT------------------------------------------------KRMQHVTHTVWSLDNKF  175 (198)
Q Consensus       144 v~d~~~~~~~~~~~~------------------------------------------------~~~~~v~~~~~s~~~~~  175 (198)
                      +|.+.+++++..+..                                                +|++.++.+.-||.+.-
T Consensus       331 LWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~  410 (430)
T KOG0640|consen  331 LWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPA  410 (430)
T ss_pred             eeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCc
Confidence            999998777655411                                                57788889999999999


Q ss_pred             EEEecCCCeEEEEecC
Q psy8758         176 VISASDEMNLRVWKAH  191 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~  191 (198)
                      +++|+.|-.+++|--+
T Consensus       411 FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  411 FMTCSDDFRARFWYRR  426 (430)
T ss_pred             eeeecccceeeeeeec
Confidence            9999999999999643

>KOG0310|consensus

Probab=99.94  E-value=1.9e-24  Score=152.97  Aligned_cols=188  Identities=12%  Similarity=0.153  Sum_probs=151.3

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      .+|..+.|+|++ +.+++|++|+.+++||+.+...  .+....|+.-|.+.+|+|...+++++|+.||.|++||++... 
T Consensus       111 apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v--~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~  188 (487)
T KOG0310|consen  111 APVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV--QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS  188 (487)
T ss_pred             CceeEEEecccCCeEEEecCCCceEEEEEcCCcEE--EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc
Confidence            478889999955 5778888999999999988764  223334688899999999999999999999999999999763 


Q ss_pred             Cccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          80 SPLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        80 ~~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ...+..           ++..+++......+++||+.+.++.+.....|...|+|+.+..++..|++++-|+.+++||+.
T Consensus       189 ~v~elnhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t  268 (487)
T KOG0310|consen  189 RVVELNHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT  268 (487)
T ss_pred             eeEEecCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEcc
Confidence            222211           111233444556899999998677777777799999999999999999999999999999988


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +.+.+..+.  -.++|.+++.+|+++.++.|..||.+.+=+...+
T Consensus       269 ~~Kvv~s~~--~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k  311 (487)
T KOG0310|consen  269 NYKVVHSWK--YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVK  311 (487)
T ss_pred             ceEEEEeee--cccceeeEEecCCCceEEEecccceeeeehhhcc
Confidence            888877763  3489999999999999999999998877654433

>KOG0313|consensus

Probab=99.94  E-value=7.2e-25  Score=151.07  Aligned_cols=190  Identities=18%  Similarity=0.291  Sum_probs=148.7

Q ss_pred             cceeEEEECCCC---ceEEEeeCCCeEEEEEccCCceeeeeee--eeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDN---KFVISASDEMNLRVWKAHASEKLGPIRK--VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~---~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ++|.+++|-...   ..|++++.|.++++|..+.++.......  ..|...|.++...+++..+++ |+.|..+.+|+..
T Consensus       145 ~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~S-gS~D~~lkiWs~~  223 (423)
T KOG0313|consen  145 GPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCS-GSWDTMLKIWSVE  223 (423)
T ss_pred             cceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEe-ecccceeeecccC
Confidence            467777774322   3699999999999999987654332222  257889999999999988765 6899999999932


Q ss_pred             CCC---------------------------CccccccC----------ceEEEecCCCcEEEEEccCCCcceeeecCCCc
Q psy8758          77 QLN---------------------------SPLNVHKD----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS  119 (198)
Q Consensus        77 ~~~---------------------------~~~~~~~~----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~  119 (198)
                      ...                           ..+.+|.+          .++.+++.|.+|+.||+.. +.....+.. ..
T Consensus       224 ~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDlet-g~~~~~~~~-~k  301 (423)
T KOG0313|consen  224 TDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLET-GGLKSTLTT-NK  301 (423)
T ss_pred             CCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeec-ccceeeeec-Cc
Confidence            110                           12334444          3588999999999999998 566666654 56


Q ss_pred             ceEEEEEccCCCEEEEeecCCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758         120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .+++++++|..++|++|+.|..+++||.+++  ..+..-..+|...|.++.|+|... .|++++.||++++||+++.+
T Consensus       302 sl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k  379 (423)
T KOG0313|consen  302 SLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK  379 (423)
T ss_pred             ceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence            7999999999999999999999999999975  344444579999999999999665 67889999999999999876

>KOG0274|consensus

Probab=99.94  E-value=8e-25  Score=163.63  Aligned_cols=186  Identities=16%  Similarity=0.251  Sum_probs=155.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      +.|.++++..-+.++++|+.|.++++||..++++...+..+  ...+.++...   +...++|+.|.+|++|++.+..  
T Consensus       250 g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh--~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l  324 (537)
T KOG0274|consen  250 GGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGH--TSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACL  324 (537)
T ss_pred             CCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCC--CceEEEEEcc---CceEeeccCCceEEEEeccCcceE
Confidence            56889999887889999999999999999999988888754  6666776654   3455567899999999998654  


Q ss_pred             Ccccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          80 SPLNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        80 ~~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                      ..+.+|.         ...+++|+.|+.|.+||+.+ .++++.+.+|...|.++.+.+. ..+++|+.|+.|++||+++.
T Consensus       325 ~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~-~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~  402 (537)
T KOG0274|consen  325 NLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRT-GKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTK  402 (537)
T ss_pred             EEeccccccEEEEEecCCEEEEEecCceEEEEEhhh-ceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCch
Confidence            2233343         35699999999999999997 8999999999999999988765 89999999999999999999


Q ss_pred             -ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         151 -HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       151 -~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                       +++..+ .+|...+..+.+  .+++|++++.|+.|++||..++++++
T Consensus       403 ~~c~~tl-~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~  447 (537)
T KOG0274|consen  403 RKCIHTL-QGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLR  447 (537)
T ss_pred             hhhhhhh-cCCccccccccc--ccceeEeccccccEEEeecccCceee
Confidence             787776 678777755544  67899999999999999999998763

>KOG0289|consensus

Probab=99.93  E-value=2.4e-24  Score=150.89  Aligned_cols=188  Identities=15%  Similarity=0.195  Sum_probs=156.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .+.++...|....+++|+.|..+.++|...++.+..+..  |...|+.+.|+|+...+++ ++.|..|++|.......  
T Consensus       221 gi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~G--h~kki~~v~~~~~~~~v~~-aSad~~i~vws~~~~s~~~  297 (506)
T KOG0289|consen  221 GITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKG--HTKKITSVKFHKDLDTVIT-ASADEIIRVWSVPLSSEPT  297 (506)
T ss_pred             CeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccC--cceEEEEEEeccchhheee-cCCcceEEeeccccccCcc
Confidence            467788888878999999999999999988887777766  4677999999999888776 57999999999864332  


Q ss_pred             ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      ....|           .+.++++++.|+...+.|+++ +..+.....  ..-.+++.+|+|||-.|.+|..|+.++|||+
T Consensus       298 ~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~-g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl  376 (506)
T KOG0289|consen  298 SSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISS-GSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL  376 (506)
T ss_pred             ccccccccceeeeeccCCcEEEEecCCceEEEEEccC-CcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence            22222           345799999999999999998 555544432  3345899999999999999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .++.....+ .+|.++|..++|+.+|-+|+++++|+.|++||++.-+.
T Consensus       377 ks~~~~a~F-pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n  423 (506)
T KOG0289|consen  377 KSQTNVAKF-PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN  423 (506)
T ss_pred             CCccccccC-CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc
Confidence            999887777 78999999999999999999999999999999986543

>KOG0305|consensus

Probab=99.93  E-value=2.6e-24  Score=156.46  Aligned_cols=185  Identities=15%  Similarity=0.325  Sum_probs=148.9

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--cccc
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--PLNV   84 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~~~   84 (198)
                      ++|+ ..+.+++|. ...|++|+..+++... +... +...|+++.|+++|.+|++ |..+|.+.+||..+.+.  .+..
T Consensus       183 ldWs-s~n~laVal-g~~vylW~~~s~~v~~-l~~~-~~~~vtSv~ws~~G~~Lav-G~~~g~v~iwD~~~~k~~~~~~~  257 (484)
T KOG0305|consen  183 LDWS-SANVLAVAL-GQSVYLWSASSGSVTE-LCSF-GEELVTSVKWSPDGSHLAV-GTSDGTVQIWDVKEQKKTRTLRG  257 (484)
T ss_pred             hhcc-cCCeEEEEe-cceEEEEecCCCceEE-eEec-CCCceEEEEECCCCCEEEE-eecCCeEEEEehhhccccccccC
Confidence            5677 344566654 4479999998876332 2222 2678999999999999987 67999999999876553  3334


Q ss_pred             -ccC---------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758          85 -HKD---------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus        85 -~~~---------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                       |..         .++.+|+.++.|..+|++........+.+|...|..++|++|++++|+|+.|+.+.|||....++..
T Consensus       258 ~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~  337 (484)
T KOG0305|consen  258 SHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKF  337 (484)
T ss_pred             CcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccE
Confidence             433         4688999999999999998544444578899999999999999999999999999999998777777


Q ss_pred             EEeccCcccEEEEEEcC-CCCEEEEe--cCCCeEEEEecCCCcccc
Q psy8758         155 IYHTKRMQHVTHTVWSL-DNKFVISA--SDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~-~~~~l~~~--~~dg~v~~w~~~~~~~~~  197 (198)
                      .+ ..|...|..++|+| ....||+|  +.|++|++||..+|+.+.
T Consensus       338 ~~-~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~  382 (484)
T KOG0305|consen  338 TF-TEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARID  382 (484)
T ss_pred             EE-eccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEec
Confidence            76 78999999999999 56688886  479999999999988763

>KOG0306|consensus

Probab=99.93  E-value=2.7e-24  Score=159.53  Aligned_cols=188  Identities=17%  Similarity=0.193  Sum_probs=159.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccC-----Cceee-----eeeeeeecCceeeEEeCCCCCeEEEEecCCccEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA-----SEKLG-----PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-----~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~   71 (198)
                      +.|..++.+||++.+++|+.|.+|++||..-     +...+     .-+....+..|.++.+|||+++++++ --|.+++
T Consensus       455 gaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVs-LLdnTVk  533 (888)
T KOG0306|consen  455 GAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVS-LLDNTVK  533 (888)
T ss_pred             cceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEE-eccCeEE
Confidence            6789999999999999999999999999751     11111     11233456789999999999999875 5899999


Q ss_pred             EEeccCCCC--ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec
Q psy8758          72 SYDIRQLNS--PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        72 ~~d~~~~~~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      +|-+.+.+-  .+-+|           ....+++|+.|..|++|-+.- +.+-+.+.+|.+.|+++.|-|....+.+++.
T Consensus       534 VyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdF-GDCHKS~fAHdDSvm~V~F~P~~~~FFt~gK  612 (888)
T KOG0306|consen  534 VYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDF-GDCHKSFFAHDDSVMSVQFLPKTHLFFTCGK  612 (888)
T ss_pred             EEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEecccc-chhhhhhhcccCceeEEEEcccceeEEEecC
Confidence            998887653  22233           345699999999999999987 7899999999999999999999999999999


Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |+.|+-||-..-+.+..+ .+|...|++++.+|+|.++++++.|.+|++|....
T Consensus       613 D~kvKqWDg~kFe~iq~L-~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td  665 (888)
T KOG0306|consen  613 DGKVKQWDGEKFEEIQKL-DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD  665 (888)
T ss_pred             cceEEeechhhhhhheee-ccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence            999999999998888887 68889999999999999999999999999998754

>KOG0973|consensus

Probab=99.93  E-value=4.1e-24  Score=163.60  Aligned_cols=192  Identities=16%  Similarity=0.216  Sum_probs=150.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccC----------C-----ceeeeeee-eeecCceeeEEeCCCCCeEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA----------S-----EKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~----------~-----~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      +.|+|+.|+|||++||+|++|+.|.+|+...          +     +..+.+.. ..|...|..++|+|++.++++ ++
T Consensus        70 ~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS-~s  148 (942)
T KOG0973|consen   70 GSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVS-VS  148 (942)
T ss_pred             CceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEE-ec
Confidence            6899999999999999999999999999872          0     01111212 227888999999999888876 57


Q ss_pred             CCccEEEEeccCCC--CccccccC-----------ceEEEecCCCcEEEEEccCC-------------------------
Q psy8758          66 EDFNLYSYDIRQLN--SPLNVHKD-----------MTSAAANEDFNLYSYDIRQL-------------------------  107 (198)
Q Consensus        66 ~d~~i~~~d~~~~~--~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~-------------------------  107 (198)
                      .|+.|.+||.++..  ..+.+|..           .++++-+.|++|++|+..+.                         
T Consensus       149 ~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWS  228 (942)
T KOG0973|consen  149 LDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWS  228 (942)
T ss_pred             ccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccC
Confidence            99999999998763  34455543           57999999999999985431                         


Q ss_pred             --------------------------CcceeeecCCCcceEEEEEccC-----CC------------EEEEeecCCcEEE
Q psy8758         108 --------------------------NSPLNVHKDMTSAVTSVDYSPT-----GR------------EFVAGGYDKSLRL  144 (198)
Q Consensus       108 --------------------------~~~~~~~~~~~~~i~~~~~sp~-----~~------------~l~~~~~d~~v~v  144 (198)
                                                .+.-..+-+|..++.++.|+|.     .+            .+|+|+.|++|.|
T Consensus       229 PDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSV  308 (942)
T KOG0973|consen  229 PDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSV  308 (942)
T ss_pred             CCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEE
Confidence                                      0111234578889999999983     11            5788999999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      |.....+++...+.--...|.+++|+|||..|+++|.||+|.+..++..+
T Consensus       309 W~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E  358 (942)
T KOG0973|consen  309 WNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE  358 (942)
T ss_pred             EecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence            99988888777655556799999999999999999999999999987543

>KOG1539|consensus

Probab=99.93  E-value=2.3e-24  Score=161.25  Aligned_cols=184  Identities=14%  Similarity=0.171  Sum_probs=157.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee-eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR-KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      .+++++.++.|++.+.|...|.|-+|++++|-....+. ...|..+|+.++...-++.++++ +.+|.++.||...... 
T Consensus       450 ~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa-~~~Gilkfw~f~~k~l~  528 (910)
T KOG1539|consen  450 NATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSA-GADGILKFWDFKKKVLK  528 (910)
T ss_pred             ceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEc-cCcceEEEEecCCccee
Confidence            57899999999999999999999999999987666663 23478899999999888888775 5899999999876541 


Q ss_pred             -----------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          81 -----------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        81 -----------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                 ....+....++.+.+|-.|.++|..+ .+..+.+.+|...|++++|||||++|++++.|++|++||+.+
T Consensus       529 ~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t-~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt  607 (910)
T KOG1539|consen  529 KSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVT-RKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPT  607 (910)
T ss_pred             eeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchh-hhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccC
Confidence                       11122234578888999999999998 788899999999999999999999999999999999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCC-CeEEEEec
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-MNLRVWKA  190 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~v~~w~~  190 (198)
                      +.++..+...  .+..++.|||+|.+||+...| .-|++|--
T Consensus       608 ~~lID~~~vd--~~~~sls~SPngD~LAT~Hvd~~gIylWsN  647 (910)
T KOG1539|consen  608 GTLIDGLLVD--SPCTSLSFSPNGDFLATVHVDQNGIYLWSN  647 (910)
T ss_pred             cceeeeEecC--CcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence            9998887444  789999999999999999887 67999954

>KOG0302|consensus

Probab=99.93  E-value=1e-24  Score=150.38  Aligned_cols=159  Identities=16%  Similarity=0.272  Sum_probs=128.0

Q ss_pred             eEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeee-eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           5 THTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         5 ~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ++++|||-. -.+++|..-+.|++|...++.-..-- ....|+..|-.++|+|....+|++|+.|+.|++||+|...   
T Consensus       215 y~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~---  291 (440)
T KOG0302|consen  215 YGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGP---  291 (440)
T ss_pred             eeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCC---
Confidence            678999933 25788888889999999876532111 1112788899999999999999999999999999998642   


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC---CceeeEEecc
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ---GHSRDIYHTK  159 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~---~~~~~~~~~~  159 (198)
                                               .++....+.|.+.|+.|+|+.+-.+||+|+.||+++|||++.   ++++..+ ..
T Consensus       292 -------------------------~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~f-k~  345 (440)
T KOG0302|consen  292 -------------------------KKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATF-KY  345 (440)
T ss_pred             -------------------------ccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeE-Ee
Confidence                                     233444488999999999999988999999999999999986   4555665 67


Q ss_pred             CcccEEEEEEcCC-CCEEEEecCCCeEEEEecCC
Q psy8758         160 RMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       160 ~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |..+|+++.|+|. ...|++++.|..|.+||+..
T Consensus       346 Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv  379 (440)
T KOG0302|consen  346 HKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV  379 (440)
T ss_pred             ccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence            8899999999995 45788889999999999863

>KOG0308|consensus

Probab=99.93  E-value=1.8e-24  Score=158.10  Aligned_cols=186  Identities=17%  Similarity=0.186  Sum_probs=156.1

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      |++++...+++.|++++.|.+|++|+...+  -+..+++.  |..-|.+++.-.....++++|+-|+.|++||+......
T Consensus        76 VNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~--H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~  153 (735)
T KOG0308|consen   76 VNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRT--HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTAT  153 (735)
T ss_pred             HhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhc--ccchheeeeecccCceeEEecCCCccEEEEEccCcchh
Confidence            566777788999999999999999999766  34455555  57779999994455666677889999999999855221


Q ss_pred             ------------cc-cc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee
Q psy8758          82 ------------LN-VH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        82 ------------~~-~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                                  +. ++           .+.++++|+..+.+++||.++ .+.+..+.+|...|..+..++||+.+++++
T Consensus       154 l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt-~~kimkLrGHTdNVr~ll~~dDGt~~ls~s  232 (735)
T KOG0308|consen  154 LVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRT-CKKIMKLRGHTDNVRVLLVNDDGTRLLSAS  232 (735)
T ss_pred             hhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEecccc-ccceeeeeccccceEEEEEcCCCCeEeecC
Confidence                        00 11           123688999999999999999 677778889999999999999999999999


Q ss_pred             cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         138 YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .||+|++||+...+++..+ ..|...|+++..+|+=..+++|+.||.|..=|+++.
T Consensus       233 SDgtIrlWdLgqQrCl~T~-~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~  287 (735)
T KOG0308|consen  233 SDGTIRLWDLGQQRCLATY-IVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNP  287 (735)
T ss_pred             CCceEEeeeccccceeeeE-EeccCceEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence            9999999999999999987 678888999999999999999999999999998874

>KOG0308|consensus

Probab=99.93  E-value=6.7e-25  Score=160.29  Aligned_cols=184  Identities=18%  Similarity=0.237  Sum_probs=147.8

Q ss_pred             CCCceEEEeeCCCeEEEEEccCCce--ee--eeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC----Ccc
Q psy8758          11 LDNKFVISASDEMNLRVWKAHASEK--LG--PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN----SPL   82 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~~~--~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~----~~~   82 (198)
                      |.+++|++|+.||.|++|+......  ..  ......|...|+.+....+++.++++ +.|-+|++|+.....    ..+
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~-SsDtTVK~W~~~~~~~~c~sti  113 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISA-SSDTTVKVWNAHKDNTFCMSTI  113 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEe-cCCceEEEeecccCcchhHhhh
Confidence            4667899999999999999863321  11  11122268889999998888888775 789999999987553    233


Q ss_pred             cccc------------CceEEEecCCCcEEEEEccCCCc-c--------eeeec-CCCcceEEEEEccCCCEEEEeecCC
Q psy8758          83 NVHK------------DMTSAAANEDFNLYSYDIRQLNS-P--------LNVHK-DMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        83 ~~~~------------~~~~~~~~~~~~i~~~d~~~~~~-~--------~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                      ..|.            ...+++|+-|+.|.+||+..... .        ...+. ++..++.+++.++.|..+++|+..+
T Consensus       114 r~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek  193 (735)
T KOG0308|consen  114 RTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEK  193 (735)
T ss_pred             hcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCccc
Confidence            3343            34689999999999999986311 1        12223 6788999999999999999999999


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+++||.++.+.+..+ .+|...|..+..++||..+++++.||+|++||+..++++
T Consensus       194 ~lr~wDprt~~kimkL-rGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl  248 (735)
T KOG0308|consen  194 DLRLWDPRTCKKIMKL-RGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCL  248 (735)
T ss_pred             ceEEeccccccceeee-eccccceEEEEEcCCCCeEeecCCCceEEeeecccccee
Confidence            9999999998887777 599999999999999999999999999999999988876

>KOG0274|consensus

Probab=99.93  E-value=6.2e-24  Score=158.87  Aligned_cols=183  Identities=15%  Similarity=0.223  Sum_probs=153.5

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeee-eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--C
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGP-IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--S   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--~   80 (198)
                      +.+..|.  ..++++++.+++|++|+..++..... +..  |.+.|.++++..-+..+ .+|+.|.++++||..+..  .
T Consensus       211 ~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~G--H~g~V~~l~~~~~~~~l-vsgS~D~t~rvWd~~sg~C~~  285 (537)
T KOG0274|consen  211 VLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVG--HFGGVWGLAFPSGGDKL-VSGSTDKTERVWDCSTGECTH  285 (537)
T ss_pred             hhhheee--cCeEEecCCCceeEEeecccceEEEeeccC--CCCCceeEEEecCCCEE-EEEecCCcEEeEecCCCcEEE
Confidence            4455555  56788999999999999988876554 443  68889999998744554 557899999999988665  3


Q ss_pred             ccccccC---------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc
Q psy8758          81 PLNVHKD---------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus        81 ~~~~~~~---------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                      .+.+|..         ..+++|+.|.+|++|++.+ +..+..+.+|..+|+++.++  +.++++|+.|++|++||..+++
T Consensus       286 ~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n-~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~  362 (537)
T KOG0274|consen  286 SLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTN-GACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGK  362 (537)
T ss_pred             EecCCCceEEEEEccCceEeeccCCceEEEEeccC-cceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhce
Confidence            4555654         3577889999999999998 78888888899999999997  7899999999999999999999


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC-ccc
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS-EKL  196 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~-~~~  196 (198)
                      ++..+ .+|...|.++.+.+. +.+++|+.|+.|++||++++ +++
T Consensus       363 cl~sl-~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~  406 (537)
T KOG0274|consen  363 CLKSL-SGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCI  406 (537)
T ss_pred             eeeee-cCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhh
Confidence            99988 689999999988766 88999999999999999998 553

>KOG4328|consensus

Probab=99.93  E-value=3e-24  Score=151.12  Aligned_cols=190  Identities=13%  Similarity=0.130  Sum_probs=149.5

Q ss_pred             cceeEEEECCCC--ceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDN--KFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~--~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|++++|+|..  +.+|+|+..|+|-+||+.+.  .....+.-..|..+|.++.|+|.+...+.+.+.||+|++-|++.
T Consensus       187 ~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~  266 (498)
T KOG4328|consen  187 RRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEG  266 (498)
T ss_pred             cceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeeecc
Confidence            679999999955  58889999999999999522  22233334457889999999998776666678999999999986


Q ss_pred             CCCccc---------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCc
Q psy8758          78 LNSPLN---------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKS  141 (198)
Q Consensus        78 ~~~~~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~  141 (198)
                      ......               ...+..++.+..-|...+||++..+.....+.-|...|+.++++|-.. +|++++.|++
T Consensus       267 ~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T  346 (498)
T KOG4328|consen  267 NISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQT  346 (498)
T ss_pred             hhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcc
Confidence            542111               112234566666679999999997777888888999999999999755 7899999999


Q ss_pred             EEEEEcCCCcee---eEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         142 LRLYLAHQGHSR---DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       142 v~v~d~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .+|||++.-...   ......|...|.++.|||.+-.|++.+.|+.|+|||..
T Consensus       347 ~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss  399 (498)
T KOG4328|consen  347 AKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSS  399 (498)
T ss_pred             eeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecc
Confidence            999999873322   23345788999999999988889999999999999983

>KOG0270|consensus

Probab=99.93  E-value=3.8e-24  Score=150.03  Aligned_cols=192  Identities=16%  Similarity=0.297  Sum_probs=154.6

Q ss_pred             ceeEEEECCC-CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           3 HVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         3 ~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      .|.+++|+.. .+.||+|+.|.+|.+||+.++++...+..  |...|.++.|+|....++.+|+.|+++.+.|.|...  
T Consensus       245 avl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~--~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s  322 (463)
T KOG0270|consen  245 AVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITH--HGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNS  322 (463)
T ss_pred             HHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhh--cCCceeEEEecCCCceEEEeccccceEEeeeccCcccc
Confidence            3456777764 45899999999999999999987776664  578899999999998888889999999999999422  


Q ss_pred             ------------CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEEEEE
Q psy8758          80 ------------SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 ------------~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~v~d  146 (198)
                                  ..+..|....+++++.||.++-+|+|+.++++.++..|.++|.++++++.-. ++++++.|+.|++|+
T Consensus       323 ~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~  402 (463)
T KOG0270|consen  323 GKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWK  402 (463)
T ss_pred             CceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEe
Confidence                        1345667788999999999999999998899999999999999999998754 788999999999999


Q ss_pred             cCCCceeeEE-eccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIY-HTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~-~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +......... +.-..+...++++.|+-. +++.|+..+.+++||+.+...+
T Consensus       403 ~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  403 FDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             ecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence            9765443322 011123467777788654 5777888888999999887654

>KOG0289|consensus

Probab=99.93  E-value=1.5e-23  Score=146.90  Aligned_cols=184  Identities=17%  Similarity=0.228  Sum_probs=155.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|+.+.++|+...+++++.|-.|++|.............  |..+|+.+..+|.|.+++.+ +.|+.....|.++....
T Consensus       262 kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~--h~~~V~~ls~h~tgeYllsA-s~d~~w~Fsd~~~g~~l  338 (506)
T KOG0289|consen  262 KKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRP--HEEPVTGLSLHPTGEYLLSA-SNDGTWAFSDISSGSQL  338 (506)
T ss_pred             eEEEEEEeccchhheeecCCcceEEeeccccccCcccccc--ccccceeeeeccCCcEEEEe-cCCceEEEEEccCCcEE
Confidence            3688999999999999999999999999876654444443  68899999999999999886 78999999998765421


Q ss_pred             --------------cccccC-ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          82 --------------LNVHKD-MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        82 --------------~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                                    ...|++ .++.+|..|+.+++||+.+ ......|.+|.++|..++|+.+|-+|+++..|+.|++||
T Consensus       339 t~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks-~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwD  417 (506)
T KOG0289|consen  339 TVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS-QTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWD  417 (506)
T ss_pred             EEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC-ccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEE
Confidence                          223443 4688999999999999998 568889999999999999999999999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ++..+....+.......+.++.|.+.|.+|+.++.|=.|++++
T Consensus       418 LRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~  460 (506)
T KOG0289|consen  418 LRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICK  460 (506)
T ss_pred             ehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEe
Confidence            9998887777555556899999999999999998776666665

>KOG1332|consensus

Probab=99.92  E-value=9.9e-24  Score=138.04  Aligned_cols=191  Identities=14%  Similarity=0.203  Sum_probs=146.5

Q ss_pred             cceeEEEECC--CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCC-CeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPME-AFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +||..++|..  -|++||+++.||.|.||.-..++-.+......|...|++++|.|.+ ..++++++.||.|.+.+.+..
T Consensus        57 GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~  136 (299)
T KOG1332|consen   57 GPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS  136 (299)
T ss_pred             CCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC
Confidence            7899999976  8999999999999999998877533333333378899999999964 345566789999999988754


Q ss_pred             C-----Ccccccc-------------------------CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEc
Q psy8758          79 N-----SPLNVHK-------------------------DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        79 ~-----~~~~~~~-------------------------~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~s  127 (198)
                      .     .....|.                         ...+++|+.|..|++|+..+.. .....+.+|.+.++.++|.
T Consensus       137 g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwa  216 (299)
T KOG1332|consen  137 GGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWA  216 (299)
T ss_pred             CCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhc
Confidence            1     1222221                         1349999999999999988632 2334578999999999999


Q ss_pred             cCC----CEEEEeecCCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         128 PTG----REFVAGGYDKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       128 p~~----~~l~~~~~d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |.-    .+||++++||++.||-.+..  .....+.......++.+.||+.|+.|+.++.|+.|.+|.-+.
T Consensus       217 P~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  217 PSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             cccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            973    38999999999999988742  112222233446899999999999999999999999998653

>KOG0307|consensus

Probab=99.92  E-value=7.9e-25  Score=168.34  Aligned_cols=193  Identities=11%  Similarity=0.240  Sum_probs=151.1

Q ss_pred             eeEEEECCCCce----EEEeeCCCeEEEEEccC---Cceeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           4 VTHTVWSLDNKF----VISASDEMNLRVWKAHA---SEKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         4 v~~~~~s~~~~~----l~~~~~d~~i~i~~~~~---~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      -+.++|.+.|..    |+.|.+||.|-+||...   +.....+.. ..|.+.|..+.|++....++++|..+|.|++||+
T Consensus        67 F~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDl  146 (1049)
T KOG0307|consen   67 FNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDL  146 (1049)
T ss_pred             ceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEecc
Confidence            468999998765    88888999999999864   222222222 2378999999999999988888999999999999


Q ss_pred             cCCCCcccccc----------------CceEEEecCCCcEEEEEccCCCcceeeecCCC--cceEEEEEccCCC-EEEEe
Q psy8758          76 RQLNSPLNVHK----------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT--SAVTSVDYSPTGR-EFVAG  136 (198)
Q Consensus        76 ~~~~~~~~~~~----------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~i~~~~~sp~~~-~l~~~  136 (198)
                      .....++....                ..++++++.+|.+.+||++. .+++..+..+.  ..+..++|+|++. .++++
T Consensus       147 nn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~-~~pii~ls~~~~~~~~S~l~WhP~~aTql~~A  225 (1049)
T KOG0307|consen  147 NKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRK-KKPIIKLSDTPGRMHCSVLAWHPDHATQLLVA  225 (1049)
T ss_pred             CCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccC-CCcccccccCCCccceeeeeeCCCCceeeeee
Confidence            98766555421                13689999999999999998 46665554443  3477899999864 55555


Q ss_pred             ecC---CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCcccc
Q psy8758         137 GYD---KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       137 ~~d---~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +.|   -.|.+||++.-........+|...|.++.|++.. .+|++++.|+.|..|+.+|++.++
T Consensus       226 s~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~  290 (1049)
T KOG0307|consen  226 SGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLG  290 (1049)
T ss_pred             cCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEee
Confidence            554   3799999997655444447999999999999965 789999999999999999999774

>KOG0293|consensus

Probab=99.92  E-value=2.9e-23  Score=144.87  Aligned_cols=190  Identities=16%  Similarity=0.242  Sum_probs=152.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..|.-+.||++|++||+++.|.+..+|++..........+. .|..+|.-+.|+||.++++++| .+..+++||+.+...
T Consensus       225 dEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg-~~e~~~lwDv~tgd~  303 (519)
T KOG0293|consen  225 DEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACG-FDEVLSLWDVDTGDL  303 (519)
T ss_pred             CcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecC-chHheeeccCCcchh
Confidence            46889999999999999999999999998655443333333 2688899999999999999875 677799999986543


Q ss_pred             cccc--------------ccCceEEEecCCCcEEEEEccCCCcceeeecCC-CcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          81 PLNV--------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-TSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        81 ~~~~--------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                      ....              ..+.-+++|+.|+++..||+..  ..+...++- ...|.+++..+||+++++...|..|++|
T Consensus       304 ~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg--n~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~  381 (519)
T KOG0293|consen  304 RHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG--NILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLY  381 (519)
T ss_pred             hhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc--chhhcccccccceeEEEEEcCCCcEEEEEecccceeee
Confidence            2211              1223599999999999999984  555555543 3569999999999999999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +..+...+..+..  ..+|++++.|.|++++++.-.+..+++||++..+.+
T Consensus       382 ~~e~~~dr~lise--~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv  430 (519)
T KOG0293|consen  382 NREARVDRGLISE--EQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLV  430 (519)
T ss_pred             chhhhhhhccccc--cCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHH
Confidence            9988777655422  368999999999999999989999999999865543

>KOG0641|consensus

Probab=99.92  E-value=1.6e-22  Score=131.50  Aligned_cols=192  Identities=14%  Similarity=0.206  Sum_probs=149.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccC------C----ce---eeeeeeeeecCceeeEEeCCCCCeEEEEecCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA------S----EK---LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF   68 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~------~----~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~   68 (198)
                      +.|.+++|.|.|.+.++|++..+++|.....      +    +.   +..-+...|.+.|.|.+|+|.|+.+++ |+.|.
T Consensus        33 qairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliat-gsndk  111 (350)
T KOG0641|consen   33 QAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIAT-GSNDK  111 (350)
T ss_pred             hheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEe-cCCCc
Confidence            6799999999999999999999999875431      1    11   111122237888999999999998865 78999


Q ss_pred             cEEEEeccCCCC-------ccccccC---------------ceEEE-ecCCCcEEEEEccCCCcceeeecCCCcceEEEE
Q psy8758          69 NLYSYDIRQLNS-------PLNVHKD---------------MTSAA-ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        69 ~i~~~d~~~~~~-------~~~~~~~---------------~~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  125 (198)
                      .|++........       .++-|.+               .++++ |..|.+|++-|... ++.+..+.+|.+.|.++ 
T Consensus       112 ~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~-g~~~~a~sghtghilal-  189 (350)
T KOG0641|consen  112 TIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGR-GQGFHALSGHTGHILAL-  189 (350)
T ss_pred             eEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCC-CCcceeecCCcccEEEE-
Confidence            999987653322       2222322               23444 45688899999988 78999999999999876 


Q ss_pred             EccCCCEEEEeecCCcEEEEEcCCCceeeEEec-cC-----cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-KR-----MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-~~-----~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++-+|-.+++|++|.+|++||++-..++..+.. .|     ...|.+++..|.|++|++|-.|....+||++.++.+
T Consensus       190 yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~i  266 (350)
T KOG0641|consen  190 YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMI  266 (350)
T ss_pred             EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCcee
Confidence            556788999999999999999998887776521 12     257999999999999999999999999999988875

>KOG0306|consensus

Probab=99.92  E-value=1.8e-23  Score=155.25  Aligned_cols=190  Identities=14%  Similarity=0.196  Sum_probs=160.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .+.+..|-|.++++++|...|.+.+||+.+......++.  |.+.+.+++.+||+..+++ |+.|.+|++||......  
T Consensus       414 y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~A--HdgaIWsi~~~pD~~g~vT-~saDktVkfWdf~l~~~~~  490 (888)
T KOG0306|consen  414 YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRA--HDGAIWSISLSPDNKGFVT-GSADKTVKFWDFKLVVSVP  490 (888)
T ss_pred             cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhc--cccceeeeeecCCCCceEE-ecCCcEEEEEeEEEEeccC
Confidence            467788889889999999999999999988776666664  5889999999999999876 57999999999752211  


Q ss_pred             -----ccc------------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee
Q psy8758          81 -----PLN------------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        81 -----~~~------------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                           .+.                  ...+.+++++--|.++++|-+.+ -+....+.+|.-||.||..|||++.++||+
T Consensus       491 gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDt-lKFflsLYGHkLPV~smDIS~DSklivTgS  569 (888)
T KOG0306|consen  491 GTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDT-LKFFLSLYGHKLPVLSMDISPDSKLIVTGS  569 (888)
T ss_pred             cccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecc-eeeeeeecccccceeEEeccCCcCeEEecc
Confidence                 011                  11235678888899999999988 466778889999999999999999999999


Q ss_pred             cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         138 YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .|..|++|-++-|.+...+ .+|...|.++.|-|+...+.+++.|+.|+-||-...+++.
T Consensus       570 ADKnVKiWGLdFGDCHKS~-fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq  628 (888)
T KOG0306|consen  570 ADKNVKIWGLDFGDCHKSF-FAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQ  628 (888)
T ss_pred             CCCceEEeccccchhhhhh-hcccCceeEEEEcccceeEEEecCcceEEeechhhhhhhe
Confidence            9999999999999998887 6899999999999999999999999999999987766653

>KOG0268|consensus

Probab=99.92  E-value=2e-24  Score=148.25  Aligned_cols=185  Identities=19%  Similarity=0.221  Sum_probs=147.6

Q ss_pred             ceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           3 HVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         3 ~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      .|.|++=+|.. ..+++|+.||.|+|||+....+...+..  |.+.|..+++..  ..++++ +.|.+++.|.+....  
T Consensus        68 GV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~A--H~G~V~Gi~v~~--~~~~tv-gdDKtvK~wk~~~~p~~  142 (433)
T KOG0268|consen   68 GVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKA--HEGLVRGICVTQ--TSFFTV-GDDKTVKQWKIDGPPLH  142 (433)
T ss_pred             ccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeec--ccCceeeEEecc--cceEEe-cCCcceeeeeccCCcce
Confidence            57888888876 7899999999999999988877777766  477899999886  556665 489999988743210  


Q ss_pred             --------------------------------------Cc------------cccccCceEEEecCCCcEEEEEccCCCc
Q psy8758          80 --------------------------------------SP------------LNVHKDMTSAAANEDFNLYSYDIRQLNS  109 (198)
Q Consensus        80 --------------------------------------~~------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~  109 (198)
                                                            ..            +++-...+++++..|+.|.+||+++ ..
T Consensus       143 tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~-~~  221 (433)
T KOG0268|consen  143 TILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQ-AS  221 (433)
T ss_pred             eeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEeccc-CC
Confidence                                                  00            0001113588999999999999999 67


Q ss_pred             ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       110 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      |++.... ...-+.|+|+|.+-.+++++.|..++.||++.-+.....+.+|.+.|.+++|||-|+-+++||.|.+|+||.
T Consensus       222 Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~  300 (433)
T KOG0268|consen  222 PLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFP  300 (433)
T ss_pred             ccceeee-eccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEee
Confidence            7765542 344578999998888999999999999999986665555689999999999999999999999999999999


Q ss_pred             cCCCc
Q psy8758         190 AHASE  194 (198)
Q Consensus       190 ~~~~~  194 (198)
                      ++.+.
T Consensus       301 ~~~~~  305 (433)
T KOG0268|consen  301 VNHGH  305 (433)
T ss_pred             cCCCc
Confidence            98664

>KOG0267|consensus

Probab=99.92  E-value=3e-25  Score=163.81  Aligned_cols=161  Identities=17%  Similarity=0.337  Sum_probs=144.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+|.++.|+++..+|++|+.+|+|++||++..+.++.+..+  ...+.++.|+|-+.+. +.|+.|..+++||.+.    
T Consensus        71 spIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh--~~~~~sv~f~P~~~~~-a~gStdtd~~iwD~Rk----  143 (825)
T KOG0267|consen   71 SPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGH--LLNITSVDFHPYGEFF-ASGSTDTDLKIWDIRK----  143 (825)
T ss_pred             CcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhcc--ccCcceeeeccceEEe-ccccccccceehhhhc----
Confidence            47899999999999999999999999999988877766654  6678899999998887 4577888888888875    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM  161 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~  161 (198)
                                                ..+.+.+.+|...+..+.|+|+|++++.++.|..++|||+..|+....+ ..|.
T Consensus       144 --------------------------~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef-~~~e  196 (825)
T KOG0267|consen  144 --------------------------KGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEF-KSHE  196 (825)
T ss_pred             --------------------------cCceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccccccc-cccc
Confidence                                      3678888889999999999999999999999999999999999999887 6788


Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..+.++.|+|..-++++|+.|+++++||+++.+.+
T Consensus       197 ~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I  231 (825)
T KOG0267|consen  197 GKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVI  231 (825)
T ss_pred             ccccccccCchhhhhccCCCCceeeeeccceeEEe
Confidence            99999999999989999999999999999987765

>KOG0283|consensus

Probab=99.92  E-value=4.1e-23  Score=154.48  Aligned_cols=187  Identities=18%  Similarity=0.275  Sum_probs=144.3

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++.|.++.||.+ ++|++++.|.+|+||++...++   +..+.|..-|+|++|+|.....|.+|+-|+.|++|++...+.
T Consensus       369 t~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~C---L~~F~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~V  444 (712)
T KOG0283|consen  369 TADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKEC---LKVFSHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKV  444 (712)
T ss_pred             chhheecccccC-CeeEeccccccEEeecCCCcce---eeEEecCCeeEEEEecccCCCcEeecccccceEEeecCcCee
Confidence            357889999965 5788999999999999986665   555567899999999998888888899999999999875442


Q ss_pred             c-----------cc-cccCceEEEecCCCcEEEEEccCCCcceeee---------cCCCcceEEEEEccCCC-EEEEeec
Q psy8758          81 P-----------LN-VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH---------KDMTSAVTSVDYSPTGR-EFVAGGY  138 (198)
Q Consensus        81 ~-----------~~-~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~sp~~~-~l~~~~~  138 (198)
                      .           +. ...+...++|+-+|.+++|+.+.. +.....         ..|. .|+.+.|.|... .+++.+.
T Consensus       445 v~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~l-k~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSn  522 (712)
T KOG0283|consen  445 VDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGL-KLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSN  522 (712)
T ss_pred             EeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCC-eEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecC
Confidence            1           11 123667899999999999998862 322221         1123 799999998543 5777788


Q ss_pred             CCcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      |..|||||.++..++..+...+. ..-....|+.||++|+++++|..|++|++...
T Consensus       523 DSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  523 DSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSF  578 (712)
T ss_pred             CCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence            99999999988887777643332 22345689999999999999999999998543

>KOG0299|consensus

Probab=99.92  E-value=3.2e-23  Score=146.00  Aligned_cols=191  Identities=19%  Similarity=0.237  Sum_probs=156.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceee--------------eeeee--eecCceeeEEeCCCCCeEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG--------------PIRKV--VMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--------------~~~~~--~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      -+|.+++++|++++.++++.+++|.-|++.+++...              ++...  .|...+.+++.++|++++++ |.
T Consensus       143 ~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylat-gg  221 (479)
T KOG0299|consen  143 LSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLAT-GG  221 (479)
T ss_pred             CcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEe-cC
Confidence            478999999999999999999999999998775321              11111  35667899999999999987 56


Q ss_pred             CCccEEEEeccCCCC--ccccccCce-----------EEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCE
Q psy8758          66 EDFNLYSYDIRQLNS--PLNVHKDMT-----------SAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE  132 (198)
Q Consensus        66 ~d~~i~~~d~~~~~~--~~~~~~~~~-----------~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  132 (198)
                      .|..|.+|+.++...  .+.+|.+.+           +++++.|+++++|++.+ ...+.++.+|++.|..+.-..-++.
T Consensus       222 ~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~-~s~vetlyGHqd~v~~IdaL~reR~  300 (479)
T KOG0299|consen  222 RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ-LSYVETLYGHQDGVLGIDALSRERC  300 (479)
T ss_pred             CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH-hHHHHHHhCCccceeeechhcccce
Confidence            899999999987764  456776643           78999999999999998 6778889999999999998888888


Q ss_pred             EEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +-+|+.|.++++|++.....  .+..++.+.+-+++|-.+ ..+++|+.+|.|.+|++...+++.
T Consensus       301 vtVGgrDrT~rlwKi~eesq--lifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf  362 (479)
T KOG0299|consen  301 VTVGGRDRTVRLWKIPEESQ--LIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLF  362 (479)
T ss_pred             EEeccccceeEEEeccccce--eeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCcee
Confidence            88888999999999955433  333577789999999755 567899999999999998887763

>KOG0275|consensus

Probab=99.92  E-value=2.1e-24  Score=146.88  Aligned_cols=162  Identities=11%  Similarity=0.234  Sum_probs=130.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+|.|+.||.|.+.+|+|+.||.|++|.+.+|.+++.+.. .|...|+++.|+.|+..++++ +.|.++++.-+.+    
T Consensus       264 ~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdr-AHtkGvt~l~FSrD~SqiLS~-sfD~tvRiHGlKS----  337 (508)
T KOG0275|consen  264 DAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDR-AHTKGVTCLSFSRDNSQILSA-SFDQTVRIHGLKS----  337 (508)
T ss_pred             cceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhh-hhccCeeEEEEccCcchhhcc-cccceEEEecccc----
Confidence            5799999999999999999999999999999998887764 367889999999999999875 6888888888776    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEec---
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT---  158 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~---  158 (198)
                                                ++.++.+.+|.+.|+...|.+||..+++++.||+|++|+.++.+++..+..   
T Consensus       338 --------------------------GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~  391 (508)
T KOG0275|consen  338 --------------------------GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGT  391 (508)
T ss_pred             --------------------------chhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCC
Confidence                                      577888888888888888888888888888888888888876554433311   


Q ss_pred             -----------------------------------------c--CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         159 -----------------------------------------K--RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       159 -----------------------------------------~--~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                                                               +  ..+...+.+.||.|.++++.++|+.++-|.+.+|++
T Consensus       392 d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~L  471 (508)
T KOG0275|consen  392 DYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKL  471 (508)
T ss_pred             cccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCce
Confidence                                                     0  123344556788888888888888888888877764

>KOG1332|consensus

Probab=99.92  E-value=1.7e-23  Score=136.95  Aligned_cols=186  Identities=13%  Similarity=0.198  Sum_probs=142.0

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCC--CCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNP--MEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      .++...--|++||+++.|++|+|+..........+..+. |.++|..++|..  .|..| ++++.||.+.+|.-.+..- 
T Consensus        15 Hda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iL-AScsYDgkVIiWke~~g~w~   93 (299)
T KOG1332|consen   15 HDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTIL-ASCSYDGKVIIWKEENGRWT   93 (299)
T ss_pred             hHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEe-eEeecCceEEEEecCCCchh
Confidence            344445568999999999999999998665433333333 789999999964  45555 4568999999999876531 


Q ss_pred             ---ccccc-------------cCceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEccC---C---------
Q psy8758          81 ---PLNVH-------------KDMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPT---G---------  130 (198)
Q Consensus        81 ---~~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~sp~---~---------  130 (198)
                         ....|             .+..++.++.||.|.+.+.+..+  ...+....|.-.+++++|.|.   |         
T Consensus        94 k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~  173 (299)
T KOG1332|consen   94 KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAA  173 (299)
T ss_pred             hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCccc
Confidence               11222             22468999999999999988742  223445679999999999996   4         


Q ss_pred             --CEEEEeecCCcEEEEEcCCCceeeE-EeccCcccEEEEEEcCCC----CEEEEecCCCeEEEEecC
Q psy8758         131 --REFVAGGYDKSLRLYLAHQGHSRDI-YHTKRMQHVTHTVWSLDN----KFVISASDEMNLRVWKAH  191 (198)
Q Consensus       131 --~~l~~~~~d~~v~v~d~~~~~~~~~-~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~~w~~~  191 (198)
                        +.|++|+.|+.|+||+...++.... ...+|...|+.++|.|.-    .+||+++.||+|.||..+
T Consensus       174 ~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~  241 (299)
T KOG1332|consen  174 KVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD  241 (299)
T ss_pred             ccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence              5699999999999999998643222 247899999999999963    379999999999999876

>KOG0300|consensus

Probab=99.91  E-value=2.8e-23  Score=141.09  Aligned_cols=186  Identities=19%  Similarity=0.267  Sum_probs=151.3

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec------cC
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI------RQ   77 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~------~~   77 (198)
                      |..++-......+.+++.|.+.+||.++++.++..+..  |.+.|++++|++.+..+++ ++.|++..+|..      .+
T Consensus       151 iW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~G--H~GSVNsikfh~s~~L~lT-aSGD~taHIW~~av~~~vP~  227 (481)
T KOG0300|consen  151 IWHVAADSTQPICGTASADHTARIWSLESGACLATYTG--HTGSVNSIKFHNSGLLLLT-ASGDETAHIWKAAVNWEVPS  227 (481)
T ss_pred             eeeehhhcCCcceeecccccceeEEeeccccceeeecc--cccceeeEEeccccceEEE-ccCCcchHHHHHhhcCcCCC
Confidence            45555555556888899999999999999998887776  4788999999998877765 578999998873      22


Q ss_pred             CCC------------------------------------ccccccC-----------ceEEEecCCCcEEEEEccCCCcc
Q psy8758          78 LNS------------------------------------PLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSP  110 (198)
Q Consensus        78 ~~~------------------------------------~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~  110 (198)
                      ...                                    .+.+|..           ...++++.|.+..+||+++ +.+
T Consensus       228 ~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt-ge~  306 (481)
T KOG0300|consen  228 NNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVET-GEV  306 (481)
T ss_pred             CCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeecc-Cce
Confidence            110                                    0122222           1377889999999999999 899


Q ss_pred             eeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         111 LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       111 ~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +..+.+|....+-++-+|..+++++++.|.+.++||++..-......++|...|+++.|.-+.+ +++|++|.+|++||+
T Consensus       307 v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdL  385 (481)
T KOG0300|consen  307 VNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDL  385 (481)
T ss_pred             eccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCc-eeecCCCceEEEeee
Confidence            9999999999999999999999999999999999999975554444589999999999998754 678999999999999


Q ss_pred             CCCc
Q psy8758         191 HASE  194 (198)
Q Consensus       191 ~~~~  194 (198)
                      ++.+
T Consensus       386 rNMR  389 (481)
T KOG0300|consen  386 RNMR  389 (481)
T ss_pred             cccc
Confidence            8764

>KOG1036|consensus

Probab=99.91  E-value=3.5e-22  Score=134.52  Aligned_cols=190  Identities=10%  Similarity=0.183  Sum_probs=146.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .++.+++|.+ ...+++|+-||.|+.+|+.+++. ..+.  .|..++.++.+++....+++ |+.|++|++||.++....
T Consensus        55 ~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~-~~ig--th~~~i~ci~~~~~~~~vIs-gsWD~~ik~wD~R~~~~~  129 (323)
T KOG1036|consen   55 APLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE-DQIG--THDEGIRCIEYSYEVGCVIS-GSWDKTIKFWDPRNKVVV  129 (323)
T ss_pred             CceeeeeccC-CceEEEeccCceEEEEEecCCcc-eeec--cCCCceEEEEeeccCCeEEE-cccCccEEEEeccccccc
Confidence            5788999987 45688999999999999988763 2333  36889999999987666655 689999999999853322


Q ss_pred             ccc----------ccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          82 LNV----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        82 ~~~----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                      ...          -.+..++.|+.+..+.+||+++...+.+..+ ..+-.++++++-|++.-++.++-||.|.+=.++..
T Consensus       130 ~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s  209 (323)
T KOG1036|consen  130 GTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDS  209 (323)
T ss_pred             cccccCceEEEEeccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCc
Confidence            111          1234688999999999999998666654332 34567899999999889999999999888777665


Q ss_pred             ----ceeeEEeccC---------cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         151 ----HSRDIYHTKR---------MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       151 ----~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                          .....+ .-|         --+|++++|+|-.+.||||+.||.|.+||+.+.+.++
T Consensus       210 ~~~~skkyaF-kCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~  268 (323)
T KOG1036|consen  210 EEAQSKKYAF-KCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLK  268 (323)
T ss_pred             hHHhhhceeE-EeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhh
Confidence                222222 122         1379999999999999999999999999999888763

>KOG2445|consensus

Probab=99.91  E-value=5e-22  Score=133.99  Aligned_cols=187  Identities=15%  Similarity=0.245  Sum_probs=132.1

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCcee--eeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCCC
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL--GPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      |+++.|.+-|+++|+++.|++++|||..+....  .+-.-..|.+.|..+.|.+ .-..++++++.|+++.+|.-.....
T Consensus        16 ihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~   95 (361)
T KOG2445|consen   16 IHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSE   95 (361)
T ss_pred             eeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccccc
Confidence            889999999999999999999999997543211  1111223678899999954 4444555668999999997631110


Q ss_pred             c------------------------cccccCceEEEecCCCcEEEEEccCC-----------------------------
Q psy8758          81 P------------------------LNVHKDMTSAAANEDFNLYSYDIRQL-----------------------------  107 (198)
Q Consensus        81 ~------------------------~~~~~~~~~~~~~~~~~i~~~d~~~~-----------------------------  107 (198)
                      .                        -..|.+..+++++.||.+++|+...+                             
T Consensus        96 ~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~Cv  175 (361)
T KOG2445|consen   96 EAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCV  175 (361)
T ss_pred             ccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEE
Confidence            0                        01122334666777777776654322                             


Q ss_pred             ----------------------------------C---cceeeecCCCcceEEEEEccC-CC---EEEEeecCCcEEEEE
Q psy8758         108 ----------------------------------N---SPLNVHKDMTSAVTSVDYSPT-GR---EFVAGGYDKSLRLYL  146 (198)
Q Consensus       108 ----------------------------------~---~~~~~~~~~~~~i~~~~~sp~-~~---~l~~~~~d~~v~v~d  146 (198)
                                                        +   ..+..+.+|+.+|++++|.|+ |+   .||+++.|| |+||.
T Consensus       176 sWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~  254 (361)
T KOG2445|consen  176 SWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFK  254 (361)
T ss_pred             eeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEE
Confidence                                              1   112344578889999999997 43   789999999 99999


Q ss_pred             cCCCc-----------------eeeEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         147 AHQGH-----------------SRDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       147 ~~~~~-----------------~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +....                 .+..+  ..+|++.|+.+.|+--|..|++.+.||+|++|...
T Consensus       255 v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  255 VKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             EeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence            98311                 11111  36789999999999999999999999999999754

>KOG0973|consensus

Probab=99.91  E-value=8.7e-23  Score=156.44  Aligned_cols=177  Identities=15%  Similarity=0.210  Sum_probs=138.5

Q ss_pred             cceeEEEECCCCceEEEee--CCCeEEEEEccCC----c-----eeeee-eeeeecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758           2 QHVTHTVWSLDNKFVISAS--DEMNLRVWKAHAS----E-----KLGPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFN   69 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~~~~~~----~-----~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~   69 (198)
                      +.|.+++.+|+|..+++|+  .|+.++||+.+.-    +     ....+ ....|.+.|+|+.|+|||+++++ |++|+.
T Consensus        14 ~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAs-GSDD~~   92 (942)
T KOG0973|consen   14 KSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLAS-GSDDRL   92 (942)
T ss_pred             eeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEee-ccCcce
Confidence            4688999999999999999  8999999987521    0     11111 12237889999999999999976 689999


Q ss_pred             EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          70 LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        70 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      |.+|.....      .....+-+.+....+--      -+....+.+|...|..++|+|++.+|++++.|++|.+||.++
T Consensus        93 v~iW~~~~~------~~~~~fgs~g~~~~vE~------wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~t  160 (942)
T KOG0973|consen   93 VMIWERAEI------GSGTVFGSTGGAKNVES------WKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKT  160 (942)
T ss_pred             EEEeeeccc------CCcccccccccccccce------eeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccc
Confidence            999997641      00001111111111111      245667788999999999999999999999999999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      .+.+..+ .+|.+.|-.+.|.|-|+|||+-+.|++|++|++.+
T Consensus       161 F~~~~vl-~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~d  202 (942)
T KOG0973|consen  161 FELLKVL-RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSD  202 (942)
T ss_pred             ceeeeee-ecccccccceEECCccCeeeeecCCceEEEEEccc
Confidence            9777776 78999999999999999999999999999999765

>KOG1408|consensus

Probab=99.91  E-value=5.5e-23  Score=152.43  Aligned_cols=186  Identities=20%  Similarity=0.194  Sum_probs=155.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccCCC-
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      .+.+++.||+|++||+|..-|++++|++..-+....+..  |+..|.++.|+..  +..|+++++.|..|.++|+.+.- 
T Consensus       461 G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eA--HesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~  538 (1080)
T KOG1408|consen  461 GFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEA--HESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYD  538 (1080)
T ss_pred             ceEEEEECCCcceecccCccCceEEEEehhhhhhhheec--ccceeEEEeecCchhhhHhhhhccCCceEEEEecccccc
Confidence            478999999999999999999999999987665545544  5788999999853  44566677899999999986422 


Q ss_pred             --CccccccC------------------------------------------------------------ceEEEecCCC
Q psy8758          80 --SPLNVHKD------------------------------------------------------------MTSAAANEDF   97 (198)
Q Consensus        80 --~~~~~~~~------------------------------------------------------------~~~~~~~~~~   97 (198)
                        +.+..|..                                                            .+++++.+|.
T Consensus       539 l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDr  618 (1080)
T KOG1408|consen  539 LVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDR  618 (1080)
T ss_pred             hhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEeccc
Confidence              11111110                                                            2488999999


Q ss_pred             cEEEEEccCCCcceeeecC---CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC
Q psy8758          98 NLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK  174 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~  174 (198)
                      .|++|++.+ ++..+.+++   |.+..-.+...|.|.|+++...|.++.++|.-+++++... .+|...|+.+.|.+|-+
T Consensus       619 nirif~i~s-gKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m-~GHsE~VTG~kF~nDCk  696 (1080)
T KOG1408|consen  619 NIRIFDIES-GKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM-TGHSEAVTGVKFLNDCK  696 (1080)
T ss_pred             ceEEEeccc-cceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhh-cCcchheeeeeecccch
Confidence            999999999 788888864   5566778899999999999999999999999999999887 79999999999999999


Q ss_pred             EEEEecCCCeEEEEecCC
Q psy8758         175 FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       175 ~l~~~~~dg~v~~w~~~~  192 (198)
                      .|++.+.||+|.+|.+..
T Consensus       697 HlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  697 HLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             hheeecCCceEEEEECch
Confidence            999999999999999864

>KOG0269|consensus

Probab=99.91  E-value=4.1e-23  Score=153.57  Aligned_cols=190  Identities=13%  Similarity=0.225  Sum_probs=144.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeee--ee--eee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGP--IR--KVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~--~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.+++..+++-..++.++.. .+.||.+........  +.  ... .......+.|..-...++++++..|.|.+||+..
T Consensus        41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk  119 (839)
T KOG0269|consen   41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK  119 (839)
T ss_pred             ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence            45677888888888887765 677887753321111  11  100 1123467888865555666678999999999976


Q ss_pred             C---CC--ccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecC
Q psy8758          78 L---NS--PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYD  139 (198)
Q Consensus        78 ~---~~--~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d  139 (198)
                      .   +.  .+..|            ...++++|++||.|++||++. .+...++.+....|+.++|+|. +.+++++...
T Consensus       120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~-~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds  198 (839)
T KOG0269|consen  120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS-KKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS  198 (839)
T ss_pred             cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec-ccccccccccchhhhceeeccCCCceEEEecCC
Confidence            2   11  22222            346899999999999999998 5666667777888999999995 6789999999


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      |.+.+||++...........|.++|.++.|+|++.+||||+.|+.|+|||+.+.+
T Consensus       199 G~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~  253 (839)
T KOG0269|consen  199 GYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR  253 (839)
T ss_pred             ceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCC
Confidence            9999999998766544458999999999999999999999999999999998654

>KOG1007|consensus

Probab=99.91  E-value=8.1e-22  Score=132.10  Aligned_cols=187  Identities=19%  Similarity=0.265  Sum_probs=145.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCce-eeeeeee---eecCceeeEEeCC--CCCeEEEEecCCccEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK-LGPIRKV---VMSLRSNMVSWNP--MEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~---~~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~   75 (198)
                      +.|.|+.|.|++..+++.. |..|.+|+++.+.. ...+...   .+....++-+|+|  ++..++++  .|++++.||+
T Consensus       124 g~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt--~d~tl~~~D~  200 (370)
T KOG1007|consen  124 GKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT--SDSTLQFWDL  200 (370)
T ss_pred             CceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe--CCCcEEEEEc
Confidence            5789999999999998886 78899999987654 2222221   1344567888998  56666654  6899999999


Q ss_pred             cCCCCc---------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecC
Q psy8758          76 RQLNSP---------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYD  139 (198)
Q Consensus        76 ~~~~~~---------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d  139 (198)
                      +++...               +++..+.++++|++||.|++||.+....+++.+.+|...+.++.|+|. .+++++++.|
T Consensus       201 RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD  280 (370)
T KOG1007|consen  201 RTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSD  280 (370)
T ss_pred             cchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCC
Confidence            976532               334455689999999999999999988999999999999999999997 4578899999


Q ss_pred             CcEEEEEcCCCc------------------------e-----eeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEe
Q psy8758         140 KSLRLYLAHQGH------------------------S-----RDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWK  189 (198)
Q Consensus       140 ~~v~v~d~~~~~------------------------~-----~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~  189 (198)
                      ..|.+|...+-.                        +     +.. ...|...|.+++||. |.-.+|+-+.||.+.|=+
T Consensus       281 s~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~t-ydehEDSVY~~aWSsadPWiFASLSYDGRviIs~  359 (370)
T KOG1007|consen  281 SAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLET-YDEHEDSVYALAWSSADPWIFASLSYDGRVIISS  359 (370)
T ss_pred             ceeEEEeccccccccccccccccccCcchhhHHhccccccccccc-ccccccceEEEeeccCCCeeEEEeccCceEEeec
Confidence            999999765311                        0     111 246788999999987 455678889999999877


Q ss_pred             cCC
Q psy8758         190 AHA  192 (198)
Q Consensus       190 ~~~  192 (198)
                      +..
T Consensus       360 V~r  362 (370)
T KOG1007|consen  360 VPR  362 (370)
T ss_pred             CCh
Confidence            654

>KOG0771|consensus

Probab=99.91  E-value=2.1e-22  Score=140.54  Aligned_cols=184  Identities=15%  Similarity=0.167  Sum_probs=140.9

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc-
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-   83 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~-   83 (198)
                      .+++|+.+|..+++++.||.+|+|+..+........  .|...|.++.|+||++.|++.+ .| ...+|++++...... 
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~--~~~~eV~DL~FS~dgk~lasig-~d-~~~VW~~~~g~~~a~~  223 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEI--AHHAEVKDLDFSPDGKFLASIG-AD-SARVWSVNTGAALARK  223 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhH--hhcCccccceeCCCCcEEEEec-CC-ceEEEEeccCchhhhc
Confidence            579999999999999999999999976554333333  3577899999999999999886 56 899999987621100 


Q ss_pred             -------------cc----cC--ceEEEecCCCcEEEEEccCCCc----ceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          84 -------------VH----KD--MTSAAANEDFNLYSYDIRQLNS----PLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        84 -------------~~----~~--~~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                                   ..    .+  .+++....-+.++.||+.....    +.+........|.+++.+++|++++.|+.||
T Consensus       224 t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dG  303 (398)
T KOG0771|consen  224 TPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDG  303 (398)
T ss_pred             CCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCC
Confidence                         00    01  1233444556677766553222    2222223345799999999999999999999


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      .|.|++..+-+..+.....|...|+.+.|+||.+++++.+.|....+..+.-
T Consensus       304 sVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  304 SVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             cEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            9999999999999988899999999999999999999988888888877653

>KOG1407|consensus

Probab=99.90  E-value=9.5e-22  Score=129.93  Aligned_cols=183  Identities=14%  Similarity=0.245  Sum_probs=148.4

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..|-.++|+| ....+++++.|.+|++||...+++...+..   ...-..+.|+|++.++++ ++.|..|...|.++.+.
T Consensus        65 ~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~---~~eni~i~wsp~g~~~~~-~~kdD~it~id~r~~~~  140 (313)
T KOG1407|consen   65 DSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIET---KGENINITWSPDGEYIAV-GNKDDRITFIDARTYKI  140 (313)
T ss_pred             cchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeec---cCcceEEEEcCCCCEEEE-ecCcccEEEEEecccce
Confidence            3577788988 556899999999999999998887666554   334456889999999887 46888888888764321


Q ss_pred             -------------------------------------------cccccc-----------CceEEEecCCCcEEEEEccC
Q psy8758          81 -------------------------------------------PLNVHK-----------DMTSAAANEDFNLYSYDIRQ  106 (198)
Q Consensus        81 -------------------------------------------~~~~~~-----------~~~~~~~~~~~~i~~~d~~~  106 (198)
                                                                 .++.|+           +.++++|+.|..+.+||+..
T Consensus       141 ~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E  220 (313)
T KOG1407|consen  141 VNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE  220 (313)
T ss_pred             eehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH
Confidence                                                       112222           24699999999999999987


Q ss_pred             CCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC----
Q psy8758         107 LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE----  182 (198)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----  182 (198)
                       --+++.+..+.-+|..++||.||++||+++.|..|-|=++++|..+..+  .+.++...++|+|...+||.++.|    
T Consensus       221 -LiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI--~~~~~t~tVAWHPk~~LLAyA~ddk~~d  297 (313)
T KOG1407|consen  221 -LICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEI--PCEGPTFTVAWHPKRPLLAYACDDKDGD  297 (313)
T ss_pred             -hhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEe--eccCCceeEEecCCCceeeEEecCCCCc
Confidence             5788889999999999999999999999999999999999999988876  566899999999999999877644    


Q ss_pred             -----CeEEEEecC
Q psy8758         183 -----MNLRVWKAH  191 (198)
Q Consensus       183 -----g~v~~w~~~  191 (198)
                           |.+++|-+.
T Consensus       298 ~~reag~vKiFG~~  311 (313)
T KOG1407|consen  298 SNREAGTVKIFGLS  311 (313)
T ss_pred             cccccceeEEecCC
Confidence                 567777654

>KOG0301|consensus

Probab=99.90  E-value=3.4e-22  Score=147.19  Aligned_cols=178  Identities=16%  Similarity=0.205  Sum_probs=148.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|.+++...++. +++|+.|.++++|...  ++...+..  |...|.+++.-|++  .+.+|+.|.+|++|.-.+..+.
T Consensus       102 snVC~ls~~~~~~-~iSgSWD~TakvW~~~--~l~~~l~g--H~asVWAv~~l~e~--~~vTgsaDKtIklWk~~~~l~t  174 (745)
T KOG0301|consen  102 SNVCSLSIGEDGT-LISGSWDSTAKVWRIG--ELVYSLQG--HTASVWAVASLPEN--TYVTGSADKTIKLWKGGTLLKT  174 (745)
T ss_pred             cceeeeecCCcCc-eEecccccceEEecch--hhhcccCC--cchheeeeeecCCC--cEEeccCcceeeeccCCchhhh
Confidence            3577888777777 8999999999999874  33344443  68889999999988  3446789999999999999999


Q ss_pred             cccccCc----------eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc
Q psy8758          82 LNVHKDM----------TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus        82 ~~~~~~~----------~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                      +.+|.+.          .+++++.||.|++|++.  +..+..+.+|..-+.+++..+++..+++++.|+++++|+..  +
T Consensus       175 f~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~--ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e  250 (745)
T KOG0301|consen  175 FSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD--GEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--E  250 (745)
T ss_pred             hccchhheeeeEEecCCCeEeecCCceEEEEecc--CceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--c
Confidence            9999875          38999999999999995  68899999999999999988889999999999999999987  5


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      +.+.+ ......++++.+-++|.. ++|+.||.|+||....
T Consensus       251 ~~q~I-~lPttsiWsa~~L~NgDI-vvg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  251 CVQVI-TLPTTSIWSAKVLLNGDI-VVGGSDGRVRVFTVDK  289 (745)
T ss_pred             eEEEE-ecCccceEEEEEeeCCCE-EEeccCceEEEEEecc
Confidence            55555 223358999999998885 5677899999998763

>KOG0639|consensus

Probab=99.90  E-value=2.3e-22  Score=143.76  Aligned_cols=191  Identities=14%  Similarity=0.208  Sum_probs=151.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCce---eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK---LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      -|.++.+|...+++++|+. |.|+|||+.....   +..+.......-+.++...||++.|++. ++-.++.+||+....
T Consensus       421 vVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivG-GeastlsiWDLAapT  498 (705)
T KOG0639|consen  421 VVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVG-GEASTLSIWDLAAPT  498 (705)
T ss_pred             EEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEec-cccceeeeeeccCCC
Confidence            3678889999999999975 6899999964432   2223333335568899999999999885 578899999997654


Q ss_pred             Ccccc---------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          80 SPLNV---------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        80 ~~~~~---------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                      ..++.               ....+.+++..||.|.+||+.+ ...++.+.+|++.+.||.+++||..|-+|+-|++||.
T Consensus       499 prikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn-q~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRc  577 (705)
T KOG0639|consen  499 PRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRC  577 (705)
T ss_pred             cchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc-ceeeecccCCCCCceeEEecCCCceeecCCCccceee
Confidence            32221               1335788999999999999998 7888999999999999999999999999999999999


Q ss_pred             EEcCCCceeeEE---------------------------------------eccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758         145 YLAHQGHSRDIY---------------------------------------HTKRMQHVTHTVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       145 ~d~~~~~~~~~~---------------------------------------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v  185 (198)
                      ||+++++.+...                                       ...|...|.++.|++.|+++++.+.|+.+
T Consensus       578 WDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlL  657 (705)
T KOG0639|consen  578 WDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLL  657 (705)
T ss_pred             hhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhh
Confidence            999965432211                                       11356789999999999999999999999


Q ss_pred             EEEecCCCccc
Q psy8758         186 RVWKAHASEKL  196 (198)
Q Consensus       186 ~~w~~~~~~~~  196 (198)
                      ..|...-|..+
T Consensus       658 nawrtPyGasi  668 (705)
T KOG0639|consen  658 NAWRTPYGASI  668 (705)
T ss_pred             hhccCccccce
Confidence            99988765543

>KOG2055|consensus

Probab=99.90  E-value=2e-21  Score=137.26  Aligned_cols=189  Identities=14%  Similarity=0.203  Sum_probs=151.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|+++.|+|....+++++.|+.++||.++.......-..+....++.+..|.|+|...+.+++...-.+.||+.+.+..
T Consensus       214 ~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~  293 (514)
T KOG2055|consen  214 GGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVT  293 (514)
T ss_pred             CCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccc
Confidence            67999999999999999999999999999654433222223356789999999999955555668888999999754311


Q ss_pred             ---------------c-ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          82 ---------------L-NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        82 ---------------~-~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                                     + ..|.+.+++..+..|.|.+....+ .+.+..++ -.+.+..++|+.|++.|++++.+|.|.+|
T Consensus       294 k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT-~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~  371 (514)
T KOG2055|consen  294 KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKT-KELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVW  371 (514)
T ss_pred             cccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhh-hhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEE
Confidence                           1 135567899999999999999988 67777766 36779999999999999999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |++...++..+.....-.-++++.|+++.+||+|+..|.|.|||.++
T Consensus       372 nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s  418 (514)
T KOG2055|consen  372 NLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNS  418 (514)
T ss_pred             ecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccch
Confidence            99999888877433222346778889999999999999999999754

>KOG0307|consensus

Probab=99.90  E-value=1.7e-23  Score=161.12  Aligned_cols=193  Identities=15%  Similarity=0.247  Sum_probs=157.6

Q ss_pred             CcceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           1 MQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         1 ~~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .++|..+.|++.. +++|+|++||.|.|||+...+.............|.+++|+..-.+++++++.+|.+.+||++..+
T Consensus       116 ~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~  195 (1049)
T KOG0307|consen  116 TGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK  195 (1049)
T ss_pred             CCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC
Confidence            3789999999965 599999999999999998765444443333466799999999999999999999999999999775


Q ss_pred             Cccc--------------cccC--ceEEEecCC---CcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecC
Q psy8758          80 SPLN--------------VHKD--MTSAAANED---FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYD  139 (198)
Q Consensus        80 ~~~~--------------~~~~--~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d  139 (198)
                      ..++              .|.+  ..++++++|   -.|.+||+|....+++.++.|...|.++.|++.+ ++|++++.|
T Consensus       196 pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD  275 (1049)
T KOG0307|consen  196 PIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKD  275 (1049)
T ss_pred             cccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCC
Confidence            3322              2222  124444444   3589999998889999999999999999999976 799999999


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +.|.+|+.++++.+..+ .....++..+.|+|... .++.++-||.|.|+.+.+..
T Consensus       276 ~~ii~wN~~tgEvl~~~-p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  276 NRIICWNPNTGEVLGEL-PAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             CCeeEecCCCceEeeec-CCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            99999999999999888 34568999999999655 78888999999999987654

>KOG0288|consensus

Probab=99.90  E-value=1e-22  Score=141.86  Aligned_cols=181  Identities=18%  Similarity=0.267  Sum_probs=143.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|+++.|......+++|+.|.++++||+....+.+.+..   ...+..+..+   ...+++|-.|++|+.||.+.....
T Consensus       262 dkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~---~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs~~~~  335 (459)
T KOG0288|consen  262 DKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP---GSQCNDIVCS---ISDVISGHFDKKVRFWDIRSADKT  335 (459)
T ss_pred             cceeeehhhccccceeeccccchhhhhhhhhhheeccccc---cccccceEec---ceeeeecccccceEEEeccCCcee
Confidence            5688899988777799999999999999988776655543   3445566655   445667888999999998865532


Q ss_pred             cc------------cccCceEEEecCCCcEEEEEccCCCcceeeecCC----CcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          82 LN------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM----TSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        82 ~~------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                      ..            .+.+.-+.+++.|.++.+.|+++ ......+...    ....+.+.|||++.|+++|+.||.|+||
T Consensus       336 ~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt-~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW  414 (459)
T KOG0288|consen  336 RSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRT-KEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIW  414 (459)
T ss_pred             eEeecCcceeeEeeccCCeEEeeecCCCceeeeeccc-ccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEE
Confidence            22            12334577889999999999998 4555544321    2347889999999999999999999999


Q ss_pred             EcCCCceeeEEeccCcc-cEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         146 LAHQGHSRDIYHTKRMQ-HVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ++.++++.......+.. .|++++|+|.|..|++++.++.+.+|.
T Consensus       415 ~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  415 SVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             EccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            99999998887555544 799999999999999999999999994

>KOG0772|consensus

Probab=99.90  E-value=1.2e-22  Score=145.27  Aligned_cols=186  Identities=18%  Similarity=0.260  Sum_probs=142.1

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCce-eeeeeeee---ecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK-LGPIRKVV---MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ..++|.+|+|.. +.+++++.||++|+||+...+. ...+....   ...+++.++|+|+++.+++ |..||.|.+|+.+
T Consensus       269 a~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAa-gc~DGSIQ~W~~~  347 (641)
T KOG0772|consen  269 AELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAA-GCLDGSIQIWDKG  347 (641)
T ss_pred             eeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhh-cccCCceeeeecC
Confidence            357899999965 5889999999999999976543 23333222   2345789999999999765 5699999999975


Q ss_pred             CCCC-----ccccc-------------cCceEEEecCCCcEEEEEccCCCcceeeecCCC--cceEEEEEccCCCEEEEe
Q psy8758          77 QLNS-----PLNVH-------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT--SAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        77 ~~~~-----~~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~  136 (198)
                      ....     .-..|             .+.++++-+.|+++++||+++..+++....+..  .+-+.++|||+.+++++|
T Consensus       348 ~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TG  427 (641)
T KOG0772|consen  348 SRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTG  427 (641)
T ss_pred             CcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEec
Confidence            4321     11122             235688888999999999999888888776543  346788999999999998


Q ss_pred             ec------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         137 GY------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       137 ~~------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ..      .+.+.+||..+...+..+.. ....|..+.|+|.=+.|..++.||.+++|=
T Consensus       428 tS~~~~~~~g~L~f~d~~t~d~v~ki~i-~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  428 TSAPNGMTAGTLFFFDRMTLDTVYKIDI-STASVVRCLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             ccccCCCCCceEEEEeccceeeEEEecC-CCceEEEEeecchhhheeeecCCCceEEEE
Confidence            64      46899999999888877733 357788999999877777888899998873

>KOG0647|consensus

Probab=99.90  E-value=1.2e-21  Score=131.85  Aligned_cols=174  Identities=16%  Similarity=0.163  Sum_probs=128.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCC-eEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEA-FVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++|.+++|+.||..+++|+.|+.+++||+.+++ ...+..  |..+|..+.|-+... .++++|+.|.+|+.||.++...
T Consensus        73 ~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~--Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~p  149 (347)
T KOG0647|consen   73 GPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAA--HDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNP  149 (347)
T ss_pred             CCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeee--cccceeEEEEecCCCcceeEecccccceeecccCCCCe
Confidence            689999999999999999999999999999985 344443  688899999977544 3556789999999999986543


Q ss_pred             ccccc----------cCce--------------------------------------------EEEecCCCcEEEEEccC
Q psy8758          81 PLNVH----------KDMT--------------------------------------------SAAANEDFNLYSYDIRQ  106 (198)
Q Consensus        81 ~~~~~----------~~~~--------------------------------------------~~~~~~~~~i~~~d~~~  106 (198)
                      .....          ....                                            .+.|+-+|.+.+..+..
T Consensus       150 v~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~  229 (347)
T KOG0647|consen  150 VATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDD  229 (347)
T ss_pred             eeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCC
Confidence            21110          0112                                            34444445444444433


Q ss_pred             C-CcceeeecCCC---------cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEE
Q psy8758         107 L-NSPLNVHKDMT---------SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV  176 (198)
Q Consensus       107 ~-~~~~~~~~~~~---------~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  176 (198)
                      + .+.-..++.|.         ..|++++|+|....|++.+.||++.+||-+....+... ..|..+|++.+|+.+|.++
T Consensus       230 ~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s-~~~~qpItcc~fn~~G~if  308 (347)
T KOG0647|consen  230 PNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS-ETHPQPITCCSFNRNGSIF  308 (347)
T ss_pred             CCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc-CcCCCccceeEecCCCCEE
Confidence            1 12223344443         24788999999999999999999999999887777665 5788999999999999988


Q ss_pred             EEe
Q psy8758         177 ISA  179 (198)
Q Consensus       177 ~~~  179 (198)
                      |-+
T Consensus       309 aYA  311 (347)
T KOG0647|consen  309 AYA  311 (347)
T ss_pred             EEE
Confidence            754

>KOG1446|consensus

Probab=99.89  E-value=1.4e-20  Score=127.25  Aligned_cols=185  Identities=15%  Similarity=0.244  Sum_probs=143.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~   80 (198)
                      ..|+.++.+|-+..+++++.|++|++||++..++...+..    ..-..++|.|+|-.++++ .....|++||++... .
T Consensus       101 ~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~----~~~pi~AfDp~GLifA~~-~~~~~IkLyD~Rs~dkg  175 (311)
T KOG1446|consen  101 KRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL----SGRPIAAFDPEGLIFALA-NGSELIKLYDLRSFDKG  175 (311)
T ss_pred             ceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec----CCCcceeECCCCcEEEEe-cCCCeEEEEEecccCCC
Confidence            4689999999999999999999999999987765444433    223467899998877664 455699999998642 1


Q ss_pred             cc---c--------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcce---EEEEEccCCCEEEEeecCC
Q psy8758          81 PL---N--------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAV---TSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        81 ~~---~--------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i---~~~~~sp~~~~l~~~~~d~  140 (198)
                      ++   .              ...+..++.++..+.+++.|.-. +..+..+..++..-   -+..|.||++++++|+.||
T Consensus       176 PF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~-G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg  254 (311)
T KOG1446|consen  176 PFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFD-GTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDG  254 (311)
T ss_pred             CceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccC-CcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCC
Confidence            11   1              12345678888889999999888 67777776554332   5678999999999999999


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +|.+|+++++..+..+...+.+++.++.|+|.-..++++  +..+.+|=....+
T Consensus       255 ~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~~~~  306 (311)
T KOG1446|consen  255 TIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPDEDA  306 (311)
T ss_pred             cEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEeccccc
Confidence            999999999999988866578999999999987777665  4578888765444

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=2.7e-20  Score=132.34  Aligned_cols=187  Identities=11%  Similarity=0.056  Sum_probs=131.7

Q ss_pred             eeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      +..++|+|+++.++++ ..++.+++||+.+.+....+.   ....+..++|+|++..++++......+..||.++.....
T Consensus        75 ~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~  151 (300)
T TIGR03866        75 PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP---VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD  151 (300)
T ss_pred             ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee---CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence            5678899999977654 568999999998765444332   233467899999999988764333456778876533210


Q ss_pred             -----------c-cccCc-eEEEecCCCcEEEEEccCCCcceeeecCCC-------cceEEEEEccCCCEEEE-eecCCc
Q psy8758          83 -----------N-VHKDM-TSAAANEDFNLYSYDIRQLNSPLNVHKDMT-------SAVTSVDYSPTGREFVA-GGYDKS  141 (198)
Q Consensus        83 -----------~-~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~-~~~d~~  141 (198)
                                 . ...+. +++++..++.+.+||+++ .+.+..+..+.       .....++|+|+++++++ .+.++.
T Consensus       152 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~  230 (300)
T TIGR03866       152 NVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT-RKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANR  230 (300)
T ss_pred             EEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc-ceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCe
Confidence                       0 11223 345556789999999987 45544443211       12356889999997554 455678


Q ss_pred             EEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCccc
Q psy8758         142 LRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~~  196 (198)
                      +.+||+++++......  +...+.+++|+|+|++|+++ ..+|.|.+||+++++++
T Consensus       231 i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~  284 (300)
T TIGR03866       231 VAVVDAKTYEVLDYLL--VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVI  284 (300)
T ss_pred             EEEEECCCCcEEEEEE--eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence            9999999888766543  33578999999999998876 56899999999998864

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1274|consensus

Probab=99.89  E-value=5.7e-21  Score=144.59  Aligned_cols=184  Identities=14%  Similarity=0.277  Sum_probs=143.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .-+.++|.|+|++|++++.||.|++|+.... +.+..+..  +...+.+++...  .+++ +|+.++.|..|........
T Consensus        15 G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~--~g~~v~~ia~~s--~~f~-~~s~~~tv~~y~fps~~~~   89 (933)
T KOG1274|consen   15 GLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDI--SGELVSSIACYS--NHFL-TGSEQNTVLRYKFPSGEED   89 (933)
T ss_pred             ceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhc--cCceeEEEeecc--cceE-EeeccceEEEeeCCCCCcc
Confidence            3578999999999999999999999997655 44444432  355566665543  3444 4689999999998765421


Q ss_pred             -------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 -------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 -------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                                   ...+.+..++.|+.|-.|++.++.. ....+.+.+|..+|.++.|+|.+++||+.+.||.|++||+.
T Consensus        90 ~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D-~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~  168 (933)
T KOG1274|consen   90 TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD-SSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ  168 (933)
T ss_pred             ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccc-cchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence                         1124456789999999999999998 67788899999999999999999999999999999999998


Q ss_pred             CCceeeEE--------------------------------------------------ec-cCcccEEEEEEcCCCCEEE
Q psy8758         149 QGHSRDIY--------------------------------------------------HT-KRMQHVTHTVWSLDNKFVI  177 (198)
Q Consensus       149 ~~~~~~~~--------------------------------------------------~~-~~~~~v~~~~~s~~~~~l~  177 (198)
                      ++.+...+                                                  .. .+...+..+.|+|+|+|||
T Consensus       169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiA  248 (933)
T KOG1274|consen  169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIA  248 (933)
T ss_pred             cchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEe
Confidence            54322111                                                  00 1233488999999999999


Q ss_pred             EecCCCeEEEEecCC
Q psy8758         178 SASDEMNLRVWKAHA  192 (198)
Q Consensus       178 ~~~~dg~v~~w~~~~  192 (198)
                      +++.||.|.|||+++
T Consensus       249 As~~~g~I~vWnv~t  263 (933)
T KOG1274|consen  249 ASTLDGQILVWNVDT  263 (933)
T ss_pred             eeccCCcEEEEeccc
Confidence            999999999999986

>KOG0302|consensus

Probab=99.89  E-value=1.1e-21  Score=135.53  Aligned_cols=157  Identities=20%  Similarity=0.400  Sum_probs=121.8

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++|-.+.|||.. ..|++++.||.|+|||++.+.....+....|...|+.+.|+.... ++++|+.||++.+||+++.+.
T Consensus       258 ~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~  336 (440)
T KOG0302|consen  258 KSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKS  336 (440)
T ss_pred             cchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccC
Confidence            568899999955 589999999999999999885555555556788999999999888 555678899999999987532


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEEEcCCCc--------
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGH--------  151 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~~~--------  151 (198)
                                                 ++++..++.|+.+|+++.|+|. ...+++++.|.+|.+||+....        
T Consensus       337 ---------------------------~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~  389 (440)
T KOG0302|consen  337 ---------------------------GQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQE  389 (440)
T ss_pred             ---------------------------CCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccc
Confidence                                       6889999999999999999996 4578888999999999996311        


Q ss_pred             --------eeeE--EeccCcccEEEEEEcCCC-CEEEEecCCCeEEEE
Q psy8758         152 --------SRDI--YHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVW  188 (198)
Q Consensus       152 --------~~~~--~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w  188 (198)
                              +.+.  ++.+ ...+..+.|+++- .++++.+.|| +.||
T Consensus       390 a~~~L~dlPpQLLFVHqG-Qke~KevhWH~QiPG~lvsTa~dG-fnVf  435 (440)
T KOG0302|consen  390 AAEGLQDLPPQLLFVHQG-QKEVKEVHWHRQIPGLLVSTAIDG-FNVF  435 (440)
T ss_pred             cccchhcCCceeEEEecc-hhHhhhheeccCCCCeEEEecccc-eeEE
Confidence                    1111  1222 3568889999964 4777777787 4444

>KOG0294|consensus

Probab=99.89  E-value=6.5e-21  Score=129.00  Aligned_cols=185  Identities=13%  Similarity=0.227  Sum_probs=140.4

Q ss_pred             cceeEEEECCCCc--eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNK--FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~--~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|+++.|.+.-.  .|++|+.||.|.+|+......+..++.+  .+.|+.++.+|.++..++.| .|+.+++||+-+.+
T Consensus        84 gsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H--~~~Vt~lsiHPS~KLALsVg-~D~~lr~WNLV~Gr  160 (362)
T KOG0294|consen   84 GSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAH--KGQVTDLSIHPSGKLALSVG-GDQVLRTWNLVRGR  160 (362)
T ss_pred             cceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccc--ccccceeEecCCCceEEEEc-CCceeeeehhhcCc
Confidence            6799999999775  8999999999999999888777777765  56699999999999888774 89999999997665


Q ss_pred             Ccccc--ccCceEEEe---------cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          80 SPLNV--HKDMTSAAA---------NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        80 ~~~~~--~~~~~~~~~---------~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..+..  .....++..         .....|-+|.+.+ ......+. .+..+.++.|- ++..|++|+.|+.|.+||..
T Consensus       161 ~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~-A~v~~~i~-~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~d  237 (362)
T KOG0294|consen  161 VAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDN-ASVFREIE-NPKRILCATFL-DGSELLVGGDNEWISLKDTD  237 (362)
T ss_pred             cceeeccCCcceeeEEcCCCCEEEEEeccEEEEEeccc-HhHhhhhh-ccccceeeeec-CCceEEEecCCceEEEeccC
Confidence            43221  111111221         2234466777765 33333333 23445666664 56789999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEE--cCCCCEEEEecCCCeEEEEecCCC
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVW--SLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +..+...+ .+|..+|-++.+  .|++.+|++++.||.|++||++..
T Consensus       238 s~~~~~~~-~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  238 SDTPLTEF-LAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             CCccceee-ecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            98777766 799999999985  567889999999999999999865

>KOG1273|consensus

Probab=99.89  E-value=6.2e-21  Score=129.33  Aligned_cols=185  Identities=11%  Similarity=0.154  Sum_probs=136.6

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--   81 (198)
                      -.|+.|++.|.++|+|..||.|-|||+.+....+.+..  |..+|.+++|+++|+.|+++ +.|..|.+||+..+...  
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsa--H~~pi~sl~WS~dgr~Llts-S~D~si~lwDl~~gs~l~r  102 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSA--HVRPITSLCWSRDGRKLLTS-SRDWSIKLWDLLKGSPLKR  102 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhc--cccceeEEEecCCCCEeeee-cCCceeEEEeccCCCceeE
Confidence            47899999999999999999999999998775555655  46789999999999999886 79999999999865421  


Q ss_pred             -----------cccccCceEEEecCCCcEEEEEccCCCcceeeecC---CCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          82 -----------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        82 -----------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                                 +.++..+..++.-.+..-.+.++..+...+.....   ......+..|.+.|+++++|...|.+.++|.
T Consensus       103 irf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a  182 (405)
T KOG1273|consen  103 IRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDA  182 (405)
T ss_pred             EEccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEec
Confidence                       12223333333333333344444321111111100   0111233468899999999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .+-+++..+.......|.++.++..|++|+..+.|..|+.|+++
T Consensus       183 ~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~  226 (405)
T KOG1273|consen  183 ETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEIS  226 (405)
T ss_pred             chheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehh
Confidence            99988877754444789999999999999999999999999986

>KOG0321|consensus

Probab=99.88  E-value=1.8e-21  Score=142.27  Aligned_cols=192  Identities=18%  Similarity=0.294  Sum_probs=130.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..|.++.|-|....|++++.|.++++||+.+.+....-....|...|.+++|.|.++.+|++|+.||.|.+||++.... 
T Consensus       101 nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d  180 (720)
T KOG0321|consen  101 NAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVD  180 (720)
T ss_pred             ceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchh
Confidence            3688999999667899999999999999998876554333457888999999999999999999999999999974320 


Q ss_pred             --------cc---c-------------------------------cccCceEEEecC-CCcEEEEEccCCCc-----cee
Q psy8758          81 --------PL---N-------------------------------VHKDMTSAAANE-DFNLYSYDIRQLNS-----PLN  112 (198)
Q Consensus        81 --------~~---~-------------------------------~~~~~~~~~~~~-~~~i~~~d~~~~~~-----~~~  112 (198)
                              ..   +                               ...+..+++++. |+.|++||++....     +..
T Consensus       181 ~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~  260 (720)
T KOG0321|consen  181 ALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRG  260 (720)
T ss_pred             hHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCc
Confidence                    00   0                               011123666666 99999999986311     111


Q ss_pred             e--ecCC---CcceEEEEEccCCCEEEEeecCCcEEEE------------------------------------------
Q psy8758         113 V--HKDM---TSAVTSVDYSPTGREFVAGGYDKSLRLY------------------------------------------  145 (198)
Q Consensus       113 ~--~~~~---~~~i~~~~~sp~~~~l~~~~~d~~v~v~------------------------------------------  145 (198)
                      .  +..|   ...+.++.....|.+|.+.+.|+.|++|                                          
T Consensus       261 ~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~  340 (720)
T KOG0321|consen  261 SDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQ  340 (720)
T ss_pred             ccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcc
Confidence            1  1111   1123344444444444444445555555                                          


Q ss_pred             ----EcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCC
Q psy8758         146 ----LAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       146 ----d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~  193 (198)
                          .+.+.+.......+|...|+.++|.|.. .-++++++|..+++|++..+
T Consensus       341 ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  341 AYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             eeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence                4444444334446888899999998853 34677799999999999654

>KOG1539|consensus

Probab=99.88  E-value=1.7e-20  Score=140.89  Aligned_cols=193  Identities=16%  Similarity=0.205  Sum_probs=146.0

Q ss_pred             cceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      ++|+.++|..||+ .+++|+..|.+.+||++..+....++. .|.+.+....|-|..+.++++ +.|+.+++|-..++. 
T Consensus       245 g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~n-ah~~sv~~~~fl~~epVl~ta-~~DnSlk~~vfD~~dg  322 (910)
T KOG1539|consen  245 GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRN-AHYGSVTGATFLPGEPVLVTA-GADNSLKVWVFDSGDG  322 (910)
T ss_pred             cceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeec-cccCCcccceecCCCceEeec-cCCCceeEEEeeCCCC
Confidence            6799999999997 566677779999999987765555543 356778899999988888776 477776665332100 


Q ss_pred             -----Ccccccc--------------------------------------------------------------------
Q psy8758          80 -----SPLNVHK--------------------------------------------------------------------   86 (198)
Q Consensus        80 -----~~~~~~~--------------------------------------------------------------------   86 (198)
                           +.-.+|.                                                                    
T Consensus       323 ~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa  402 (910)
T KOG1539|consen  323 VPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFA  402 (910)
T ss_pred             cchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeee
Confidence                 0000000                                                                    


Q ss_pred             ---------------------------------------------------------CceEEEecCCCcEEEEEccCCCc
Q psy8758          87 ---------------------------------------------------------DMTSAAANEDFNLYSYDIRQLNS  109 (198)
Q Consensus        87 ---------------------------------------------------------~~~~~~~~~~~~i~~~d~~~~~~  109 (198)
                                                                               ++..+.|+..|.|-+|++.+ +-
T Consensus       403 ~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQS-Gi  481 (910)
T KOG1539|consen  403 FENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQS-GI  481 (910)
T ss_pred             cccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEccc-Ce
Confidence                                                                     01256677888999999987 55


Q ss_pred             ceeee---cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE------------------------------
Q psy8758         110 PLNVH---KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY------------------------------  156 (198)
Q Consensus       110 ~~~~~---~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~------------------------------  156 (198)
                      ....+   ..|..+|+.++..--++.+++++.+|.+.+||..+..+...+                              
T Consensus       482 ~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vv  561 (910)
T KOG1539|consen  482 HRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVV  561 (910)
T ss_pred             eecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEE
Confidence            55555   479999999999988999999999999999999865422211                              


Q ss_pred             ----------eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         157 ----------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       157 ----------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                                ..+|...|++++|||||++|++++.|++|++||+.++.++-
T Consensus       562 D~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID  612 (910)
T KOG1539|consen  562 DVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLID  612 (910)
T ss_pred             EchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceee
Confidence                      12688999999999999999999999999999999998763

>KOG0294|consensus

Probab=99.88  E-value=5.2e-21  Score=129.48  Aligned_cols=155  Identities=15%  Similarity=0.267  Sum_probs=120.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCC--eEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEA--FVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +++++++.+  +.++|+|+.|-+|+|||+........+..  |.+.|+++.|.+.-.  +|++ |++||.|.+|+...  
T Consensus        44 ~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~--HagsitaL~F~~~~S~shLlS-~sdDG~i~iw~~~~--  116 (362)
T KOG0294|consen   44 GSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLS--HAGSITALKFYPPLSKSHLLS-GSDDGHIIIWRVGS--  116 (362)
T ss_pred             cceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceec--cccceEEEEecCCcchhheee-ecCCCcEEEEEcCC--
Confidence            567888874  89999999999999999987766555554  578899999998754  5655 46777777777654  


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK  159 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~  159 (198)
                                                  -..+..+++|...|+.++.+|.+++.++.+.|+.++.||+-.|+.-+...-.
T Consensus       117 ----------------------------W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~  168 (362)
T KOG0294|consen  117 ----------------------------WELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK  168 (362)
T ss_pred             ----------------------------eEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC
Confidence                                        4778899999999999999999999999999999999999998876655444


Q ss_pred             CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         160 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       160 ~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +.  ...+.|+|.|.+++.+.. +.|-+|.+.+.+
T Consensus       169 ~~--at~v~w~~~Gd~F~v~~~-~~i~i~q~d~A~  200 (362)
T KOG0294|consen  169 NK--ATLVSWSPQGDHFVVSGR-NKIDIYQLDNAS  200 (362)
T ss_pred             Cc--ceeeEEcCCCCEEEEEec-cEEEEEecccHh
Confidence            32  233778887776665554 346777666543

>KOG0278|consensus

Probab=99.88  E-value=4e-22  Score=131.18  Aligned_cols=192  Identities=17%  Similarity=0.193  Sum_probs=159.8

Q ss_pred             CcceeEEEECC---CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           1 MQHVTHTVWSL---DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         1 ~~~v~~~~~s~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +++|..++|||   +|-+|++++.|+.-.+-+-+++.-+-++..  |.+.|.+...+.+-... ++++.|-+-++||.-+
T Consensus        14 trpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeg--hkgavw~~~l~~na~~a-asaaadftakvw~a~t   90 (334)
T KOG0278|consen   14 TRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEG--HKGAVWSATLNKNATRA-ASAAADFTAKVWDAVT   90 (334)
T ss_pred             CcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeec--cCcceeeeecCchhhhh-hhhcccchhhhhhhhh
Confidence            36899999986   888999999999998888788887666665  57888888888765544 4567899999999876


Q ss_pred             CCCcccc------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          78 LNSPLNV------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        78 ~~~~~~~------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                      .......            .....+++|+.+.-+++||++.+..+...+.+|++.|..+-|....+.+++++.|++||+|
T Consensus        91 gdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLW  170 (334)
T KOG0278|consen   91 GDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLW  170 (334)
T ss_pred             hhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEE
Confidence            5433221            2334688999999999999999888999999999999999999988999999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccccC
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH  198 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~~  198 (198)
                      |.+++..++.+...  .+|+++..+++|++|.++ ..+.|.+||.++.++++|
T Consensus       171 D~rTgt~v~sL~~~--s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs  220 (334)
T KOG0278|consen  171 DHRTGTEVQSLEFN--SPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKS  220 (334)
T ss_pred             EeccCcEEEEEecC--CCCcceeeccCCCEEEEe-cCceeEEeccccccceee
Confidence            99999999888554  689999999999987655 567899999999888764

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.87  E-value=1.6e-19  Score=128.39  Aligned_cols=177  Identities=13%  Similarity=0.082  Sum_probs=130.0

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--ccc------
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNV------   84 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~------   84 (198)
                      ++.+++++.|+.+++||+.+++....+..   ...+..++|+|+++.+++++..++.+++||..+....  +..      
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~---~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~   77 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRTFPV---GQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPEL   77 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEEEEC---CCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccE
Confidence            35688889999999999988876555542   3446789999999988777778899999998754321  111      


Q ss_pred             ---c-cC-ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC-cEEEEEcCCCceeeEEec
Q psy8758          85 ---H-KD-MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK-SLRLYLAHQGHSRDIYHT  158 (198)
Q Consensus        85 ---~-~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~-~v~v~d~~~~~~~~~~~~  158 (198)
                         + .+ .+++++..++.+++||+++ .+.+..+.. ...+..++|+|+++++++++.++ .+.+||..+++.......
T Consensus        78 ~~~~~~g~~l~~~~~~~~~l~~~d~~~-~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~  155 (300)
T TIGR03866        78 FALHPNGKILYIANEDDNLVTVIDIET-RKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV  155 (300)
T ss_pred             EEECCCCCEEEEEcCCCCeEEEEECCC-CeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc
Confidence               1 11 2345566789999999987 455555542 33467899999999999888765 577889988776554422


Q ss_pred             cCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCccc
Q psy8758         159 KRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       159 ~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~~  196 (198)
                      +  ..+..++|+|++++|+.+ ..++.|++||+++++.+
T Consensus       156 ~--~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~  192 (300)
T TIGR03866       156 D--QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVI  192 (300)
T ss_pred             C--CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceee
Confidence            2  356789999999987544 56899999999988654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.87  E-value=5.2e-20  Score=122.25  Aligned_cols=155  Identities=14%  Similarity=0.309  Sum_probs=109.9

Q ss_pred             eEEEECCCCceEEEeeC----------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEE-ecCCccEEEE
Q psy8758           5 THTVWSLDNKFVISASD----------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTA-ANEDFNLYSY   73 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~----------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~d~~i~~~   73 (198)
                      ..+.|+|+|++|+.-..          -+...+|.++..............++|.+++|+|+++.+++. |..+..+.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            35789999997765432          234666766443322222222334569999999999987654 3345567777


Q ss_pred             eccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCC
Q psy8758          74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQG  150 (198)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~  150 (198)
                      |++                               .+++..+.  ...++.+.|+|+|++|++++.   .|.+.+||.++.
T Consensus        89 d~~-------------------------------~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~  135 (194)
T PF08662_consen   89 DVK-------------------------------GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK  135 (194)
T ss_pred             cCc-------------------------------ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            764                               34555553  456789999999999999874   467999999988


Q ss_pred             ceeeEEeccCcccEEEEEEcCCCCEEEEec------CCCeEEEEecCCCccc
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNKFVISAS------DEMNLRVWKAHASEKL  196 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~v~~w~~~~~~~~  196 (198)
                      +.+...  .| ..+..++|+|||++|+++.      .|+.++||+.. |+++
T Consensus       136 ~~i~~~--~~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  136 KKISTF--EH-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             EEeecc--cc-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEe
Confidence            777664  23 4578999999999999875      37889999984 5544

>KOG2055|consensus

Probab=99.87  E-value=6.4e-21  Score=134.76  Aligned_cols=185  Identities=15%  Similarity=0.216  Sum_probs=148.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.....||++++|+..+..|.|.+....+++.+..++.   ++.+..++|+.+++.|+++| .+|.|++||+++.....
T Consensus       305 ~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki---eG~v~~~~fsSdsk~l~~~~-~~GeV~v~nl~~~~~~~  380 (514)
T KOG2055|consen  305 SMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI---EGVVSDFTFSSDSKELLASG-GTGEVYVWNLRQNSCLH  380 (514)
T ss_pred             hhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee---ccEEeeEEEecCCcEEEEEc-CCceEEEEecCCcceEE
Confidence            455677899999999999999999999888876555554   67899999999999998875 78999999998764321


Q ss_pred             c--------------cccCceEEEecCCCcEEEEEccC-----CCcceeeecCCCcceEEEEEccCCCEEEEeec--CCc
Q psy8758          83 N--------------VHKDMTSAAANEDFNLYSYDIRQ-----LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY--DKS  141 (198)
Q Consensus        83 ~--------------~~~~~~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--d~~  141 (198)
                      .              ...+.++++|++.|.|.+||..+     ..+|++.+..-...|++|+|+||++.||.++.  +..
T Consensus       381 rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~kna  460 (514)
T KOG2055|consen  381 RFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNA  460 (514)
T ss_pred             EEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccc
Confidence            1              12345899999999999999653     24677777777788999999999999988775  678


Q ss_pred             EEEEEcCCCceeeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         142 LRLYLAHQGHSRDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +++-.+.+-.....+..  ..-+.|++|+|||.|.+||.|..+|.+.+|.+.
T Consensus       461 lrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  461 LRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             eEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            99988887655444421  223579999999999999999999999999874

>KOG0639|consensus

Probab=99.87  E-value=4.5e-21  Score=137.26  Aligned_cols=181  Identities=18%  Similarity=0.190  Sum_probs=155.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++.|||.+..+++..||.|.|||+.+...++.++.+  ...+.|+..+++|..|.+ |+-|++++.||+++..+..
T Consensus       511 aCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGh--tDGascIdis~dGtklWT-GGlDntvRcWDlregrqlq  587 (705)
T KOG0639|consen  511 ACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH--TDGASCIDISKDGTKLWT-GGLDNTVRCWDLREGRQLQ  587 (705)
T ss_pred             hhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCC--CCCceeEEecCCCceeec-CCCccceeehhhhhhhhhh
Confidence            4577899999999999999999999999988877777765  677899999999999987 5699999999999876543


Q ss_pred             ccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          83 NVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        83 ~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                      ...            .+.-++.|-.++.+.+.....  .....+..|.+-|.++.|.+.|+++++.+.|+.+..|.+.-|
T Consensus       588 qhdF~SQIfSLg~cP~~dWlavGMens~vevlh~sk--p~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyG  665 (705)
T KOG0639|consen  588 QHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSK--PEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG  665 (705)
T ss_pred             hhhhhhhheecccCCCccceeeecccCcEEEEecCC--ccceeecccccEEEEEEecccCceeeecCchhhhhhccCccc
Confidence            322            234588899999999988874  455677779999999999999999999999999999999999


Q ss_pred             ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ..++..  .....|.++..|.|.++++||+.|....+|.+
T Consensus       666 asiFqs--kE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  666 ASIFQS--KESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             cceeec--cccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            887765  45589999999999999999999999888875

>KOG0300|consensus

Probab=99.87  E-value=1.1e-20  Score=128.66  Aligned_cols=189  Identities=16%  Similarity=0.250  Sum_probs=156.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|.+..|-..|+.+++++.|.+..+||+++++.+..+..+  ....+.++-+|..+.+++ .+.|.+.++||.+.... 
T Consensus       273 ~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGH--d~ELtHcstHptQrLVvT-sSrDtTFRLWDFReaI~s  349 (481)
T KOG0300|consen  273 AVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGH--DSELTHCSTHPTQRLVVT-SSRDTTFRLWDFREAIQS  349 (481)
T ss_pred             cceEehhhhcCcceeeeeeccccceeeeeccCceeccccCc--chhccccccCCcceEEEE-eccCceeEeccchhhcce
Confidence            45788899999999999999999999999999988888765  556788888888666655 58999999999996543 


Q ss_pred             --ccccccCc----------eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 --PLNVHKDM----------TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 --~~~~~~~~----------~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                        .+.+|.+.          .++++++|.+|++||+++-..++.++.. .++++.++.+..+..++.-..+..|++||++
T Consensus       350 V~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDln  428 (481)
T KOG0300|consen  350 VAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLN  428 (481)
T ss_pred             eeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecC
Confidence              45666553          4889999999999999988888888864 5788999999888899999888999999998


Q ss_pred             CCceee---EEeccCcccEEEEEEcCCC--CEEEEecCCCeEEEEecCCCc
Q psy8758         149 QGHSRD---IYHTKRMQHVTHTVWSLDN--KFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       149 ~~~~~~---~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ...+..   .-..+|...|.+++|..+.  .-|++++.|..+.-|++++..
T Consensus       429 G~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~  479 (481)
T KOG0300|consen  429 GNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT  479 (481)
T ss_pred             CCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence            755432   2357888999999998654  357889999999999998754

>KOG0270|consensus

Probab=99.87  E-value=1.9e-20  Score=131.67  Aligned_cols=179  Identities=13%  Similarity=0.191  Sum_probs=138.9

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeee-------------------eeeeeecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGP-------------------IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~-------------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      .|+++|.|+.|..|.|||+.--....+                   .....|+..|..+.|+..-+.++++|+.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            357999999999999999862211111                   1112366778899999999999999999999999


Q ss_pred             EeccCCCC--ccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEee
Q psy8758          73 YDIRQLNS--PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGG  137 (198)
Q Consensus        73 ~d~~~~~~--~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~  137 (198)
                      ||+.+.+.  .+..|            ...++++|+.|+++.+.|.|.+...-..++ ..+.|-.++|.|... .++++.
T Consensus       271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~t  349 (463)
T KOG0270|consen  271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVST  349 (463)
T ss_pred             EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccceEEEEecCCCceeEEEec
Confidence            99986552  22222            345799999999999999996433333332 456789999999765 667778


Q ss_pred             cCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCC
Q psy8758         138 YDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       138 ~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~  192 (198)
                      .||+|+-+|++.. +++..+ ..|.++|.++++++.- .++++++.|+.|++|++..
T Consensus       350 ddG~v~~~D~R~~~~~vwt~-~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~  405 (463)
T KOG0270|consen  350 DDGTVYYFDIRNPGKPVWTL-KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDV  405 (463)
T ss_pred             CCceEEeeecCCCCCceeEE-EeccCCcceEEecCCCCcceeeccccceEEEEeecC
Confidence            8999999999985 677766 7899999999999864 4788999999999999864

>KOG2048|consensus

Probab=99.86  E-value=1.2e-19  Score=133.61  Aligned_cols=163  Identities=12%  Similarity=0.197  Sum_probs=134.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+|.++||+.+.+.||.+-.+|.|.+|++..+=....+........|.+++|++ +..||++ +.+|.|.-||+.+    
T Consensus        26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~-g~sg~i~EwDl~~----   99 (691)
T KOG2048|consen   26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSS-GLSGSITEWDLHT----   99 (691)
T ss_pred             cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEee-cCCceEEEEeccc----
Confidence            468999999999999999999999999998764444443334567789999995 5567776 4788888888876    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe-ccC
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH-TKR  160 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~-~~~  160 (198)
                                                .+++..+....+.|.+|+.+|.+..++.|+.||.+..++...++...... ...
T Consensus       100 --------------------------lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq  153 (691)
T KOG2048|consen  100 --------------------------LKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQ  153 (691)
T ss_pred             --------------------------CceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccc
Confidence                                      46777777788999999999999999999999988888888877655442 333


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.+.+++|+|++..+++|+.||.|++||+..+..+
T Consensus       154 ~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~  189 (691)
T KOG2048|consen  154 KSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTL  189 (691)
T ss_pred             cceEEEEEecCCccEEEecccCceEEEEEcCCCceE
Confidence            589999999999999999999999999999988764

>KOG0303|consensus

Probab=99.86  E-value=1.1e-20  Score=131.38  Aligned_cols=162  Identities=15%  Similarity=0.278  Sum_probs=127.4

Q ss_pred             CcceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeee----eeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           1 MQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGP----IRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         1 ~~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~----~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      .++|..++|+| +...||+|++|.+|.||.+..+.....    +..+ .|...|..++|+|.-..++.+++.|..|.+||
T Consensus        81 t~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWn  160 (472)
T KOG0303|consen   81 TAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWN  160 (472)
T ss_pred             cccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEe
Confidence            36789999999 667899999999999999976532222    1112 26778899999998777766667888888888


Q ss_pred             ccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758          75 IRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                      +.+                              ++.+..+. |++-|.+++|+.||.+|++.+.|..|||||.++++.+.
T Consensus       161 v~t------------------------------geali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~  209 (472)
T KOG0303|consen  161 VGT------------------------------GEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVS  209 (472)
T ss_pred             ccC------------------------------CceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEee
Confidence            877                              45555565 99999999999999999999999999999999999988


Q ss_pred             EEeccCc-ccEEEEEEcCCCCEEEEe---cCCCeEEEEecCCCc
Q psy8758         155 IYHTKRM-QHVTHTVWSLDNKFVISA---SDEMNLRVWKAHASE  194 (198)
Q Consensus       155 ~~~~~~~-~~v~~~~~s~~~~~l~~~---~~dg~v~~w~~~~~~  194 (198)
                      .. .+|. ..-..+.|-.+|.++.||   ..+..+.+||..+-+
T Consensus       210 e~-~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~  252 (472)
T KOG0303|consen  210 EG-VAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLE  252 (472)
T ss_pred             ec-ccccCCCcceeEEeccCceeeeccccccccceeccCccccc
Confidence            76 4554 345567788899855555   357889999986543

>KOG1007|consensus

Probab=99.86  E-value=6.3e-20  Score=123.14  Aligned_cols=188  Identities=14%  Similarity=0.216  Sum_probs=139.7

Q ss_pred             cceeEEEECCC-CceEEEeeCC-------CeEEEEEccCCcee------eeeeee--eecCceeeEEeCCCCCeEEEEec
Q psy8758           2 QHVTHTVWSLD-NKFVISASDE-------MNLRVWKAHASEKL------GPIRKV--VMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d-------~~i~i~~~~~~~~~------~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      +.|..++=+|- .+.|+++..+       ..+.||.+......      ..+..+  .+-+.+.++.|.|++..+++.  
T Consensus        64 gEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm--  141 (370)
T KOG1007|consen   64 GEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASM--  141 (370)
T ss_pred             cceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEe--
Confidence            56888888884 4566665432       24678988643211      111111  133578999999999998764  


Q ss_pred             CCccEEEEeccCCCC--------------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEE
Q psy8758          66 EDFNLYSYDIRQLNS--------------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        66 ~d~~i~~~d~~~~~~--------------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  125 (198)
                      .|..|.+|++.....                    .+.+|.+...+....|++++.||+++..+....-..|...+..+.
T Consensus       142 ~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlD  221 (370)
T KOG1007|consen  142 DDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLD  221 (370)
T ss_pred             ccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhcceeeecc
Confidence            589999999875432                    234455566777889999999999984344344457888899999


Q ss_pred             EccCCC-EEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC-CCEEEEecCCCeEEEEecC
Q psy8758         126 YSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       126 ~sp~~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~  191 (198)
                      |+|+.+ +|++++.||.|++||.+..+.......+|...|+++.|+|. .+++++++.|..|.+|...
T Consensus       222 fNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~  289 (370)
T KOG1007|consen  222 FNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS  289 (370)
T ss_pred             CCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence            999866 78899999999999999866544445899999999999995 5678899999999999764

>KOG4378|consensus

Probab=99.86  E-value=1.3e-20  Score=134.69  Aligned_cols=183  Identities=13%  Similarity=0.241  Sum_probs=146.2

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cc
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LN   83 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~   83 (198)
                      |++......++++|+..+.|+|||+....+.+.++.  |...|+++.++....+|++. +..|.|.+..+.+....  +.
T Consensus        84 Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkd--h~stvt~v~YN~~DeyiAsv-s~gGdiiih~~~t~~~tt~f~  160 (673)
T KOG4378|consen   84 CVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKD--HQSTVTYVDYNNTDEYIASV-SDGGDIIIHGTKTKQKTTTFT  160 (673)
T ss_pred             HHhhhhcceeeeccCcCceeeehhhHHHHHhhhccC--CcceeEEEEecCCcceeEEe-ccCCcEEEEecccCcccccee
Confidence            444445568999999999999999986655555555  46789999999999998774 78899999998765432  11


Q ss_pred             -------------cccCceEEEecCCCcEEEEEccCCCccee-eecCCCcceEEEEEccCCC-EEEEeecCCcEEEEEcC
Q psy8758          84 -------------VHKDMTSAAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        84 -------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~v~d~~  148 (198)
                                   ......+.+++++|.|.+||+.. ..++. ..+.|..+...++|+|... +|++.+.|..|.+||.+
T Consensus       161 ~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g-~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~  239 (673)
T KOG4378|consen  161 IDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQG-MSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR  239 (673)
T ss_pred             cCCCCeEEEeecccccceeeEeeccCCeEEEEeccC-CCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence                         11224588999999999999987 44444 4478999999999999755 77889999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .......+...  .+...++|+++|.+|+.|...|.|..||++..+
T Consensus       240 s~~s~~~l~y~--~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k  283 (673)
T KOG4378|consen  240 SQASTDRLTYS--HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK  283 (673)
T ss_pred             cccccceeeec--CCcceeeecCCceEEEeecCCceEEEEecccCC
Confidence            87776665333  589999999999999999999999999998644

>KOG0301|consensus

Probab=99.86  E-value=4e-20  Score=136.41  Aligned_cols=175  Identities=17%  Similarity=0.211  Sum_probs=146.8

Q ss_pred             EEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc
Q psy8758           7 TVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH   85 (198)
Q Consensus         7 ~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~   85 (198)
                      +++-+ ++-.+++|+.|.++.+|..........++.|  ...|.++....++. + .+|+.|.++++|...+....+.+|
T Consensus        64 i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH--~snVC~ls~~~~~~-~-iSgSWD~TakvW~~~~l~~~l~gH  139 (745)
T KOG0301|consen   64 ICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGH--KSNVCSLSIGEDGT-L-ISGSWDSTAKVWRIGELVYSLQGH  139 (745)
T ss_pred             ceeccccCcceEeecccceEEEEecCCCCchhhhhcc--ccceeeeecCCcCc-e-EecccccceEEecchhhhcccCCc
Confidence            44544 4446889999999999999888777777664  67788888766666 4 467999999999999888778877


Q ss_pred             cC----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE
Q psy8758          86 KD----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI  155 (198)
Q Consensus        86 ~~----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~  155 (198)
                      +.          ..+++|+.|.+|++|.-   ++.++++.+|.+-|+.+++-|++ .+++++.||.|++|++ +++.+..
T Consensus       140 ~asVWAv~~l~e~~~vTgsaDKtIklWk~---~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~  214 (745)
T KOG0301|consen  140 TASVWAVASLPENTYVTGSADKTIKLWKG---GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLE  214 (745)
T ss_pred             chheeeeeecCCCcEEeccCcceeeeccC---CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeee
Confidence            65          35899999999999986   46788999999999999998875 4788999999999999 6666666


Q ss_pred             EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         156 YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      . .+|...+.+++..+++..++++++|+++++|+..
T Consensus       215 ~-~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~  249 (745)
T KOG0301|consen  215 M-HGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD  249 (745)
T ss_pred             e-eccceEEEEEEecCCCCeEEEecCCceEEEeecC
Confidence            5 6899999999988888999999999999999976

>KOG2919|consensus

Probab=99.86  E-value=3.3e-20  Score=126.23  Aligned_cols=180  Identities=12%  Similarity=0.187  Sum_probs=138.8

Q ss_pred             CCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCc---eeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-------
Q psy8758          11 LDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLR---SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-------   80 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-------   80 (198)
                      |+..++++.+.+.-|++||.-+|+....++...|...   ..+++|+|||..|++  +....|+++|+...-.       
T Consensus       121 P~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfa--GykrcirvFdt~RpGr~c~vy~t  198 (406)
T KOG2919|consen  121 PSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFA--GYKRCIRVFDTSRPGRDCPVYTT  198 (406)
T ss_pred             CccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEee--cccceEEEeeccCCCCCCcchhh
Confidence            6777999999999999999999987666666554333   368999999999986  3788999999942211       


Q ss_pred             ---------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEE
Q psy8758          81 ---------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRL  144 (198)
Q Consensus        81 ---------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v  144 (198)
                                     .+.++....++.++....+-+|.-.. ..++..+.+|.+.|+.+.|.++|+.|.+|+. |..|..
T Consensus       199 ~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~-~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~  277 (406)
T KOG2919|consen  199 VTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG-RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILC  277 (406)
T ss_pred             hhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC-CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEE
Confidence                           12334445678888888887877766 6889999999999999999999999999876 778999


Q ss_pred             EEcCCCce-eeEEeccCcc-cE--EEEEEcCCCCEEEEecCCCeEEEEecCC-Cc
Q psy8758         145 YLAHQGHS-RDIYHTKRMQ-HV--THTVWSLDNKFVISASDEMNLRVWKAHA-SE  194 (198)
Q Consensus       145 ~d~~~~~~-~~~~~~~~~~-~v--~~~~~s~~~~~l~~~~~dg~v~~w~~~~-~~  194 (198)
                      ||++.... +..+ ..|.. .-  .-....|++++|++|+.||.|++||+++ |.
T Consensus       278 WDiR~~~~pv~~L-~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn  331 (406)
T KOG2919|consen  278 WDIRYSRDPVYAL-ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN  331 (406)
T ss_pred             Eeehhccchhhhh-hhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCC
Confidence            99997543 3333 33322 22  2345578999999999999999999987 44

>KOG1034|consensus

Probab=99.86  E-value=9.5e-20  Score=124.09  Aligned_cols=190  Identities=13%  Similarity=0.227  Sum_probs=144.1

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|+.+.+.|+. +++++++.|..|++|++++..++..+.... |...|.++.|++++.+++++ +.|.++++|++....
T Consensus       136 ~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~Sc-GmDhslk~W~l~~~~  214 (385)
T KOG1034|consen  136 GSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASC-GMDHSLKLWRLNVKE  214 (385)
T ss_pred             ccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeecc-CCcceEEEEecChhH
Confidence            468899999965 799999999999999999999888887765 88899999999999998876 599999999997321


Q ss_pred             --C---------------cc-------------ccccC---------ceEEEecCCCcEEEEEccCCCcc----------
Q psy8758          80 --S---------------PL-------------NVHKD---------MTSAAANEDFNLYSYDIRQLNSP----------  110 (198)
Q Consensus        80 --~---------------~~-------------~~~~~---------~~~~~~~~~~~i~~~d~~~~~~~----------  110 (198)
                        .               ++             ..|.+         .++++-+-++.|..|...+..+.          
T Consensus       215 f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~  294 (385)
T KOG1034|consen  215 FKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESA  294 (385)
T ss_pred             HhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccc
Confidence              0               00             01222         24778888889999987321211          


Q ss_pred             ---eeeecCCCcceEEEE--EccCCCEEEEeecCCcEEEEEcCCCcee---eEEeccCcccEEEEEEcCCCCEEEEecCC
Q psy8758         111 ---LNVHKDMTSAVTSVD--YSPTGREFVAGGYDKSLRLYLAHQGHSR---DIYHTKRMQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       111 ---~~~~~~~~~~i~~~~--~sp~~~~l~~~~~d~~v~v~d~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                         +..+.-....|..+.  |.|-++.||.|.+.|.|.+||++..++.   ...+......|...+||.||.+|+..++|
T Consensus       295 ~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd  374 (385)
T KOG1034|consen  295 TTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDD  374 (385)
T ss_pred             eeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCC
Confidence               223333344555555  4566889999999999999999986553   22233345789999999999999999999


Q ss_pred             CeEEEEecCC
Q psy8758         183 MNLRVWKAHA  192 (198)
Q Consensus       183 g~v~~w~~~~  192 (198)
                      +.|.-||..+
T Consensus       375 ~~Vwrwdrv~  384 (385)
T KOG1034|consen  375 GTVWRWDRVS  384 (385)
T ss_pred             CcEEEEEeec
Confidence            9999998643

>KOG2106|consensus

Probab=99.85  E-value=8.4e-19  Score=125.63  Aligned_cols=179  Identities=11%  Similarity=0.134  Sum_probs=140.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-c
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-P   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-~   81 (198)
                      -|.|+.|.++|. +++|..+|.|.||+..+.+..+...  .|++.|.+++...+|..+ + |+.|..|..||-...+. .
T Consensus       248 ~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~--aH~ggv~~L~~lr~Gtll-S-GgKDRki~~Wd~~y~k~r~  322 (626)
T KOG2106|consen  248 FVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVH--AHDGGVFSLCMLRDGTLL-S-GGKDRKIILWDDNYRKLRE  322 (626)
T ss_pred             EEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEee--ecCCceEEEEEecCccEe-e-cCccceEEecccccccccc
Confidence            489999999998 6689999999999987665544444  578999999999988765 4 78999999999431110 0


Q ss_pred             -------------ccccc---------------------------------------CceEEEecCCCcEEEEEccCCCc
Q psy8758          82 -------------LNVHK---------------------------------------DMTSAAANEDFNLYSYDIRQLNS  109 (198)
Q Consensus        82 -------------~~~~~---------------------------------------~~~~~~~~~~~~i~~~d~~~~~~  109 (198)
                                   .+.+.                                       ...+++++.|+.+++|+ .  .+
T Consensus       323 ~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~-~--~k  399 (626)
T KOG2106|consen  323 TELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN-D--HK  399 (626)
T ss_pred             ccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc-C--Cc
Confidence                         00000                                       12488999999999999 2  34


Q ss_pred             ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       110 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ++.... ...+..+++|+|.| .+|.|...|...+.|..+...+... .. +.+++.++|+|+|.+||.|+.|+.|++|.
T Consensus       400 ~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~-~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~  475 (626)
T KOG2106|consen  400 LEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIH-TD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYR  475 (626)
T ss_pred             eeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEE-ec-CCceEEEEEcCCCCEEEEecCCCeEEEEE
Confidence            444433 45678999999999 9999999999999999996665544 44 78999999999999999999999999999


Q ss_pred             cCCC
Q psy8758         190 AHAS  193 (198)
Q Consensus       190 ~~~~  193 (198)
                      +...
T Consensus       476 Vs~~  479 (626)
T KOG2106|consen  476 VSAN  479 (626)
T ss_pred             ECCC
Confidence            8754

>KOG2110|consensus

Probab=99.85  E-value=4.2e-19  Score=122.52  Aligned_cols=159  Identities=12%  Similarity=0.206  Sum_probs=124.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +|.++.++.  ++|++.-.+ .|+|||+.+.+.+..+... .+..++.++.+++.+.+++.-++.+              
T Consensus        89 ~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t--------------  151 (391)
T KOG2110|consen   89 SILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT--------------  151 (391)
T ss_pred             ceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCC--------------
Confidence            456666653  456666555 4999999998888887765 3555577777777777887765432              


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCc-EEEEEcCCCceeeEEeccC
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS-LRLYLAHQGHSRDIYHTKR  160 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~-v~v~d~~~~~~~~~~~~~~  160 (198)
                                    .|.|.+||..+ -++...+..|++++.+++|+|+|.+||+++..|+ ||||.+.+|+.+..++.+-
T Consensus       152 --------------~GdV~l~d~~n-l~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~  216 (391)
T KOG2110|consen  152 --------------SGDVVLFDTIN-LQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGT  216 (391)
T ss_pred             --------------CceEEEEEccc-ceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCc
Confidence                          34455555444 4788889999999999999999999999999886 8999999999998886553


Q ss_pred             -cccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         161 -MQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       161 -~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                       ...|.+++|+|++++|++.+..++|++|.++..
T Consensus       217 ~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~  250 (391)
T KOG2110|consen  217 YPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV  250 (391)
T ss_pred             eeeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence             356899999999999999999999999998754

>KOG1036|consensus

Probab=99.85  E-value=5.7e-19  Score=119.22  Aligned_cols=182  Identities=14%  Similarity=0.066  Sum_probs=139.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .|..+.|+|.++.|++++.||.+++||.........   +.+..++.+++|.++ ..+++ |+-||.|+.+|+.+.....
T Consensus        15 ~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~---~~~~~plL~c~F~d~-~~~~~-G~~dg~vr~~Dln~~~~~~   89 (323)
T KOG1036|consen   15 GISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLK---FKHGAPLLDCAFADE-STIVT-GGLDGQVRRYDLNTGNEDQ   89 (323)
T ss_pred             ceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhh---eecCCceeeeeccCC-ceEEE-eccCceEEEEEecCCccee
Confidence            589999999999999999999999999987643333   346889999999984 44444 6799999999998765433


Q ss_pred             cc-cc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          83 NV-HK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        83 ~~-~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                      -+ |.           ...+++|+.|++|++||.+. ......+.. ...|.++..+  |..|++|..|..+.+||++..
T Consensus        90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~-~~~~~~~d~-~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~  165 (323)
T KOG1036|consen   90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN-KVVVGTFDQ-GKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNL  165 (323)
T ss_pred             eccCCCceEEEEeeccCCeEEEcccCccEEEEeccc-ccccccccc-CceEEEEecc--CCEEEEeecCceEEEEEcccc
Confidence            22 22           24589999999999999997 344444443 3378888775  678999999999999999986


Q ss_pred             ceeeEE-eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         151 HSRDIY-HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       151 ~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ...... ...-+-.++++++-|++.=++.++-||.|.+=.++..
T Consensus       166 ~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s  209 (323)
T KOG1036|consen  166 DEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDS  209 (323)
T ss_pred             cchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCc
Confidence            654432 2233457999999998887888999999988666554

>KOG0303|consensus

Probab=99.85  E-value=6.7e-20  Score=127.58  Aligned_cols=128  Identities=16%  Similarity=0.284  Sum_probs=112.1

Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS  123 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  123 (198)
                      |..+|..++|+|-+...+++|++|.+|.+|.+......                       ++..+++..+.+|...|.-
T Consensus        80 Ht~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~-----------------------~~ltepvv~L~gH~rrVg~  136 (472)
T KOG0303|consen   80 HTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLT-----------------------RDLTEPVVELYGHQRRVGL  136 (472)
T ss_pred             ccccccccccCccCCceeecCCCCceEEEEECCCcccc-----------------------cCcccceEEEeecceeEEE
Confidence            78899999999999998899999999999998753111                       1114678889999999999


Q ss_pred             EEEccCC-CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         124 VDYSPTG-REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       124 ~~~sp~~-~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++|+|.. +.|++++.|++|.+||+.+++.+..+  .|...|+++.|+.||.+|++.+.|..|+|||.++++.+
T Consensus       137 V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l--~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v  208 (472)
T KOG0303|consen  137 VQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITL--DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVV  208 (472)
T ss_pred             EeecccchhhHhhccCCceEEEEeccCCceeeec--CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEe
Confidence            9999974 58899999999999999999988776  49999999999999999999999999999999999875

>KOG0646|consensus

Probab=99.84  E-value=1.6e-19  Score=127.83  Aligned_cols=169  Identities=17%  Similarity=0.185  Sum_probs=129.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC------ceeeeeeee-eecCceeeEEeCCC--CCeEEEEecCCccEEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS------EKLGPIRKV-VMSLRSNMVSWNPM--EAFVFTAANEDFNLYS   72 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~------~~~~~~~~~-~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~   72 (198)
                      ++|+|+.|+-||.+|++|++||.|.+|.+-+-      ..+.++..+ .|.-+|+++...+.  ..+++++ +.|.++++
T Consensus       124 Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~Ta-S~D~t~k~  202 (476)
T KOG0646|consen  124 QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTA-SEDRTIKL  202 (476)
T ss_pred             cceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEe-cCCceEEE
Confidence            68999999999999999999999999987421      122333322 26778888887664  4566664 79999999


Q ss_pred             EeccCCCCcccc------------ccCceEEEecCCCcEEEEEccCCC---------------cceeeecCCCc--ceEE
Q psy8758          73 YDIRQLNSPLNV------------HKDMTSAAANEDFNLYSYDIRQLN---------------SPLNVHKDMTS--AVTS  123 (198)
Q Consensus        73 ~d~~~~~~~~~~------------~~~~~~~~~~~~~~i~~~d~~~~~---------------~~~~~~~~~~~--~i~~  123 (198)
                      ||+....-....            ..+..+..|+.+|.|.+.++.+..               ..+..+.+|..  +|+|
T Consensus       203 wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITc  282 (476)
T KOG0646|consen  203 WDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITC  282 (476)
T ss_pred             EEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeE
Confidence            999865432221            234568899999999998876422               23445677877  9999


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD  172 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~  172 (198)
                      ++++-||..|++|+.||.|+|||+.+.+++..+. ...++|+.+.+.|=
T Consensus       283 Lais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~-~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  283 LAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ-TSKGPVTNLQINPL  330 (476)
T ss_pred             EEEecCccEEEeeCCCCCEEEEecchHHHHHHHh-hhccccceeEeecc
Confidence            9999999999999999999999999998887762 24578888888664

>KOG0267|consensus

Probab=99.84  E-value=6.8e-21  Score=141.11  Aligned_cols=159  Identities=14%  Similarity=0.291  Sum_probs=133.8

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      |.++..-..++.+++|+.|-.+-+|.+........+.  .|..+|.++.|+++...++ +|+.+|+|++||++.      
T Consensus        31 v~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~--~hespIeSl~f~~~E~Lla-agsasgtiK~wDlee------  101 (825)
T KOG0267|consen   31 VGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLT--GHESPIESLTFDTSERLLA-AGSASGTIKVWDLEE------  101 (825)
T ss_pred             hceeeeeccceeeccCCCceeeccccccCCchhheee--ccCCcceeeecCcchhhhc-ccccCCceeeeehhh------
Confidence            4555555567888999999888899886554444333  3688999999999876665 467888888888875      


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCccc
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH  163 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~  163 (198)
                                              .+.++.+.+|...+.++.|+|-+.+.+.++.|..+++||.+...+...+ .+|...
T Consensus       102 ------------------------Ak~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~-~s~~~v  156 (825)
T KOG0267|consen  102 ------------------------AKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTY-KSHTRV  156 (825)
T ss_pred             ------------------------hhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeee-cCCcce
Confidence                                    5778899999999999999999999999999999999999988888877 568899


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +..++|+|+|++++.+++|..+++||...|+.+
T Consensus       157 v~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~  189 (825)
T KOG0267|consen  157 VDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLS  189 (825)
T ss_pred             eEEEeecCCCceeeccCCcceeeeecccccccc
Confidence            999999999999999999999999999888765

>KOG0290|consensus

Probab=99.84  E-value=5e-19  Score=118.95  Aligned_cols=184  Identities=15%  Similarity=0.213  Sum_probs=140.1

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCce-eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEK-LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .++++..|+. +.+++.+.+-|.+..|||++++.. ....+-..|..+|..++|...+..+|++.+.||.++++|++...
T Consensus       151 aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~le  230 (364)
T KOG0290|consen  151 APLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLE  230 (364)
T ss_pred             CcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccc
Confidence            4678889987 678999999999999999998732 11222234788999999999999999888999999999998654


Q ss_pred             Cc-----------------cccccCceEEEec-CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCC
Q psy8758          80 SP-----------------LNVHKDMTSAAAN-EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDK  140 (198)
Q Consensus        80 ~~-----------------~~~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~  140 (198)
                      ..                 .......++++.. +...|.+.|++.+..++..+.+|...|+.++|.|.. ..|++++.|.
T Consensus       231 HSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~  310 (364)
T KOG0290|consen  231 HSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDC  310 (364)
T ss_pred             cceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcc
Confidence            21                 1112223455544 446799999999999999999999999999999974 5899999999


Q ss_pred             cEEEEEcCCCce------eeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEE
Q psy8758         141 SLRLYLAHQGHS------RDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVW  188 (198)
Q Consensus       141 ~v~v~d~~~~~~------~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w  188 (198)
                      .+.+||+.+.-.      +..+  .-++.|+.+.|++ .+.+++.+. ++++.+.
T Consensus       311 qaliWDl~q~~~~~~~dPilay--~a~~EVNqi~Ws~~~~Dwiai~~-~kkleiL  362 (364)
T KOG0290|consen  311 QALIWDLQQMPRENGEDPILAY--TAGGEVNQIQWSSSQPDWIAICF-GKKLEIL  362 (364)
T ss_pred             eEEEEecccccccCCCCchhhh--hccceeeeeeecccCCCEEEEEe-cCeeeEE
Confidence            999999986322      1112  2347899999997 466777664 4555543

>KOG0650|consensus

Probab=99.84  E-value=3.5e-19  Score=129.83  Aligned_cols=183  Identities=16%  Similarity=0.242  Sum_probs=138.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      +.|.++...|.|.+|++|+.||+|+||.+.+++++..+..   .+.|.+++|+|....-+.+......+.+.+..-..  
T Consensus       401 g~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~---d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~  477 (733)
T KOG0650|consen  401 GLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF---DSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRL  477 (733)
T ss_pred             CeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee---cceeEEEEecCCCCceeEEEEecCceEEeCccccchh
Confidence            5789999999999999999999999999999988766654   66899999999765433332233445444431100  


Q ss_pred             -----------------------------------------------CccccccC-------------------------
Q psy8758          80 -----------------------------------------------SPLNVHKD-------------------------   87 (198)
Q Consensus        80 -----------------------------------------------~~~~~~~~-------------------------   87 (198)
                                                                     ..+..|..                         
T Consensus       478 e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~  557 (733)
T KOG0650|consen  478 EVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRK  557 (733)
T ss_pred             hhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccccc
Confidence                                                           00001100                         


Q ss_pred             --------------------------------------------------------------ceEEEecCCCcEEEEEcc
Q psy8758          88 --------------------------------------------------------------MTSAAANEDFNLYSYDIR  105 (198)
Q Consensus        88 --------------------------------------------------------------~~~~~~~~~~~i~~~d~~  105 (198)
                                                                                    ..++.++.|+.+..+|+.
T Consensus       558 sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDld  637 (733)
T KOG0650|consen  558 SQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLD  637 (733)
T ss_pred             ccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcc
Confidence                                                                          027888899999999998


Q ss_pred             CCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC------CCc---eeeEEeccCccc----EEEEEEcCC
Q psy8758         106 QLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH------QGH---SRDIYHTKRMQH----VTHTVWSLD  172 (198)
Q Consensus       106 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~------~~~---~~~~~~~~~~~~----v~~~~~s~~  172 (198)
                      -..++.+.+..|...+++++|++.-.++++++.||++.||.-.      ..-   ++.. ..+|...    |....|+|.
T Consensus       638 lsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~-L~gH~~~~~~gVLd~~wHP~  716 (733)
T KOG0650|consen  638 LSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKR-LRGHEKTNDLGVLDTIWHPR  716 (733)
T ss_pred             cCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeee-ccCceeecccceEeecccCC
Confidence            7678899999999999999999999999999999999998433      221   1222 3566544    899999999


Q ss_pred             CCEEEEecCCCeEEEE
Q psy8758         173 NKFVISASDEMNLRVW  188 (198)
Q Consensus       173 ~~~l~~~~~dg~v~~w  188 (198)
                      ..+|++++.||+|++|
T Consensus       717 qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  717 QPWLFSAGADGTIRLF  732 (733)
T ss_pred             CceEEecCCCceEEee
Confidence            9999999999999998

>KOG1063|consensus

Probab=99.84  E-value=4.3e-19  Score=131.13  Aligned_cols=190  Identities=16%  Similarity=0.262  Sum_probs=141.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC-ceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS-EKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|.+++|+|.|+++++.+.|.+-|+|-.-.. +.-.++...+ |....+|++|-+. +..|++|.+...+++++.....
T Consensus       362 ~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~-~~~FVSgAdEKVlRvF~aPk~f  440 (764)
T KOG1063|consen  362 DGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNE-DLQFVSGADEKVLRVFEAPKSF  440 (764)
T ss_pred             ccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccC-CceeeecccceeeeeecCcHHH
Confidence            57999999999999999999999999865411 1223333222 6777899999886 5556666677888888764100


Q ss_pred             --------------------------------Cccc--------------------------------------------
Q psy8758          80 --------------------------------SPLN--------------------------------------------   83 (198)
Q Consensus        80 --------------------------------~~~~--------------------------------------------   83 (198)
                                                      ..+.                                            
T Consensus       441 v~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~K  520 (764)
T KOG1063|consen  441 VKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHK  520 (764)
T ss_pred             HHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHH
Confidence                                            0000                                            


Q ss_pred             --cc-----------cCceEEEecCC-----CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          84 --VH-----------KDMTSAAANED-----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        84 --~~-----------~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                        +|           .+.+++++...     ..|++|+..+ -...+.+..|.-.|+.++|||||++|++.+.|.++.+|
T Consensus       521 LYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~-W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~  599 (764)
T KOG1063|consen  521 LYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTAN-WLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLY  599 (764)
T ss_pred             hccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccc-hhhhheecccceEEEEEEECCCCcEEEEeecCceEEee
Confidence              00           00123333322     3388999887 56667889999999999999999999999999999999


Q ss_pred             EcCCCceee---EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         146 LAHQGHSRD---IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       146 d~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .........   .....|...|++..|+|++.+++|+|.|.+|++|.....
T Consensus       600 ~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  600 EVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL  650 (764)
T ss_pred             eeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence            986543322   224688899999999999999999999999999998876

>KOG1408|consensus

Probab=99.84  E-value=4.1e-19  Score=132.19  Aligned_cols=181  Identities=14%  Similarity=0.223  Sum_probs=136.4

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeee-----------------------------------eeeecCceeeEEeCCCCCe
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIR-----------------------------------KVVMSLRSNMVSWNPMEAF   59 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~-----------------------------------~~~~~~~v~~~~~~~~~~~   59 (198)
                      .+.+++.|++|++|+++.+..-..++                                   .......+.+++.+|++++
T Consensus       394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh  473 (1080)
T KOG1408|consen  394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH  473 (1080)
T ss_pred             ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce
Confidence            48899999999999997532111100                                   0112235789999999999


Q ss_pred             EEEEecCCccEEEEeccCCCC--cccccc--------------CceEEEecCCCcEEEEEccCCCcceeeecCCCc----
Q psy8758          60 VFTAANEDFNLYSYDIRQLNS--PLNVHK--------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS----  119 (198)
Q Consensus        60 ~~~~~~~d~~i~~~d~~~~~~--~~~~~~--------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----  119 (198)
                      |++ |..-|++++|++.....  .+..|.              ..++++++.|.-|++||....-.++.++.+|..    
T Consensus       474 LAs-GDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITs  552 (1080)
T KOG1408|consen  474 LAS-GDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITS  552 (1080)
T ss_pred             ecc-cCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeE
Confidence            975 78889999999986542  222332              245899999999999998753233333333333    


Q ss_pred             ---------------------------------------------ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758         120 ---------------------------------------------AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus       120 ---------------------------------------------~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                                                                   .+..|+..|..++++++++|..|+|||+.+++...
T Consensus       553 vKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k  632 (1080)
T KOG1408|consen  553 VKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVK  632 (1080)
T ss_pred             EEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceee
Confidence                                                         35566777777788889999999999999999988


Q ss_pred             EEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         155 IYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       155 ~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+..  +|.+..-.+...|.|.|||+.+.|.++.++|+-+|+++
T Consensus       633 ~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcv  676 (1080)
T KOG1408|consen  633 SFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECV  676 (1080)
T ss_pred             eecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhh
Confidence            8843  45677889999999999999999999999999999986

>KOG4328|consensus

Probab=99.83  E-value=4.3e-19  Score=125.49  Aligned_cols=194  Identities=16%  Similarity=0.182  Sum_probs=144.8

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++|.++.|+|.. ..+++.+.||+|++-|++.......+...........+.|+.+...+++.. .=|...+||.+....
T Consensus       235 ~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~-~~G~f~~iD~R~~~s  313 (498)
T KOG4328|consen  235 GPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGD-NVGNFNVIDLRTDGS  313 (498)
T ss_pred             ccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEee-cccceEEEEeecCCc
Confidence            679999999954 689999999999999998664333332222344567888888888777754 556899999987654


Q ss_pred             c---------------cccccCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          81 P---------------LNVHKDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        81 ~---------------~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                      .               +++....++++++.|+++++||+++..   .++.....|...|.+..|||++-.|++.+.|+.|
T Consensus       314 ~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~I  393 (498)
T KOG4328|consen  314 EYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEI  393 (498)
T ss_pred             cchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCce
Confidence            2               223345679999999999999998643   2334456799999999999998889999999999


Q ss_pred             EEEEcC----CCceeeEEeccCc--c--cEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAH----QGHSRDIYHTKRM--Q--HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~----~~~~~~~~~~~~~--~--~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +|||..    .-.+...+...+.  .  ......|.|+-.+++.+-.-..|-++|-..++.+
T Consensus       394 Rv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v  455 (498)
T KOG4328|consen  394 RVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMV  455 (498)
T ss_pred             EEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEe
Confidence            999984    3333333321111  1  3456789999999999988888999999888743

>KOG3881|consensus

Probab=99.83  E-value=1.4e-18  Score=120.74  Aligned_cols=182  Identities=13%  Similarity=0.154  Sum_probs=151.7

Q ss_pred             eEEEeeCCCeEEEEEccCCce-eeeeeeeeecCceeeEEeCCCCCeEEEEecCC--ccEEEEeccCCCCcccc-------
Q psy8758          15 FVISASDEMNLRVWKAHASEK-LGPIRKVVMSLRSNMVSWNPMEAFVFTAANED--FNLYSYDIRQLNSPLNV-------   84 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d--~~i~~~d~~~~~~~~~~-------   84 (198)
                      .|+++-.+|.+++|....+.. ...+........+..+.-+|..+.++++|+..  ..+.+||+.+.++.+..       
T Consensus       117 ~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~  196 (412)
T KOG3881|consen  117 TLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDR  196 (412)
T ss_pred             EEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCcc
Confidence            577788899999999875431 11222222345677888888899999988888  88999999877544332       


Q ss_pred             -----------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          85 -----------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        85 -----------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                                       .....+++++..+++++||.+....|+..+.-...+++++...|++++++++...+.+..||+
T Consensus       197 L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~  276 (412)
T KOG3881|consen  197 LGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDL  276 (412)
T ss_pred             ccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecc
Confidence                             224579999999999999999888999999888899999999999999999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.++.......+..+.++++..+|..+++|+++-|..|+|+|+++.+++
T Consensus       277 r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll  325 (412)
T KOG3881|consen  277 RGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLL  325 (412)
T ss_pred             cCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhh
Confidence            9999888766788899999999999999999999999999999996654

>KOG1273|consensus

Probab=99.83  E-value=1.3e-18  Score=118.24  Aligned_cols=192  Identities=16%  Similarity=0.232  Sum_probs=142.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+|.+++||++|++|++++.|..+.+||+..|...+.++   ...+|..+.|+|.....+++.-.+..-.+.++...+..
T Consensus        66 ~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir---f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~  142 (405)
T KOG1273|consen   66 RPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR---FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS  142 (405)
T ss_pred             cceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE---ccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee
Confidence            589999999999999999999999999999888655554   47889999999977666555444444455554432211


Q ss_pred             -----------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCC-cceEEEEEccCCCEEEEeecCCcEE
Q psy8758          82 -----------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        82 -----------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                                       +-...+.++++|+.-|.+.++|..+ -+++..++... ..|..+-++..|+.|+..+.|..||
T Consensus       143 ~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t-~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR  221 (405)
T KOG1273|consen  143 VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET-LECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIR  221 (405)
T ss_pred             eccCCCccccccccccccccCCCCEEEEecCcceEEEEecch-heeeeeeeechheeeeEEEEeccCcEEEEecCCceEE
Confidence                             1122446899999999999999998 57777665544 7899999999999999999999999


Q ss_pred             EEEcCCC----c--eeeEEec----cCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCcccc
Q psy8758         144 LYLAHQG----H--SRDIYHT----KRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       144 v~d~~~~----~--~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~~~  197 (198)
                      .|+++.-    +  .+...+.    -..-.-.+++||.+|.|++.++ ....++||.-..|.+++
T Consensus       222 ~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVK  286 (405)
T KOG1273|consen  222 TYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVK  286 (405)
T ss_pred             EEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceee
Confidence            9998731    1  1110000    0113456788999999988765 34679999998887764

>KOG0322|consensus

Probab=99.83  E-value=2.5e-19  Score=118.83  Aligned_cols=185  Identities=17%  Similarity=0.234  Sum_probs=135.8

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++.|+++.|..+++ |++|...|.+++|++++.+....++.+ +...|+.+.--|++. +.+ -+.|..+.+|++.....
T Consensus        14 ~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~-g~~~it~lq~~p~d~-l~t-qgRd~~L~lw~ia~s~~   89 (323)
T KOG0322|consen   14 SSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLF-GRLFITNLQSIPNDS-LDT-QGRDPLLILWTIAYSAF   89 (323)
T ss_pred             cchheehhhccchh-hhcccccceEEEEEeecCccchhhhhh-ccceeeceeecCCcc-hhh-cCCCceEEEEEccCcce
Confidence            35678888887766 888999999999999887655445432 456677777777643 434 35888888888753110


Q ss_pred             ---------------------------ccccc------------------------------------------cCceEE
Q psy8758          81 ---------------------------PLNVH------------------------------------------KDMTSA   91 (198)
Q Consensus        81 ---------------------------~~~~~------------------------------------------~~~~~~   91 (198)
                                                 ....+                                          ...+++
T Consensus        90 i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lll  169 (323)
T KOG0322|consen   90 ISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLL  169 (323)
T ss_pred             EEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEE
Confidence                                       00000                                          002488


Q ss_pred             EecCCCcEEEEEccCCCcc---------eeeecCC---------------------------------------------
Q psy8758          92 AANEDFNLYSYDIRQLNSP---------LNVHKDM---------------------------------------------  117 (198)
Q Consensus        92 ~~~~~~~i~~~d~~~~~~~---------~~~~~~~---------------------------------------------  117 (198)
                      +|.++|.+.+||+....+.         ......|                                             
T Consensus       170 aGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~l  249 (323)
T KOG0322|consen  170 AGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITL  249 (323)
T ss_pred             EeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEe
Confidence            8999999999998762000         0000011                                             


Q ss_pred             -CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         118 -TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       118 -~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                       ...+..+..-||++.+|+++.|+.||||+.++..++..+ ..|...|++++|+|+...+|+++.|+.|.+|++
T Consensus       250 knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL-kyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  250 KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL-KYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             cCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhh-hhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence             123556777789999999999999999999999999887 678899999999999999999999999999986

>KOG2048|consensus

Probab=99.83  E-value=2.4e-18  Score=126.80  Aligned_cols=187  Identities=13%  Similarity=0.106  Sum_probs=150.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|.+++.+|.+..++.|++||.+..++...+.......-....+++.++.|+|++..++. |+.||.|++||...+...
T Consensus       111 g~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~-Gs~Dg~Iriwd~~~~~t~  189 (691)
T KOG2048|consen  111 GAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAG-GSIDGVIRIWDVKSGQTL  189 (691)
T ss_pred             cceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEe-cccCceEEEEEcCCCceE
Confidence            5789999999999999999999777777655543222222224688999999999998876 789999999999865432


Q ss_pred             c--------------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCc
Q psy8758          82 L--------------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        82 ~--------------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                      .                    ..-.+..+++|...|+|.+||... +..++.+..|...|.+++..+++..+++++.|+.
T Consensus       190 ~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~-gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~  268 (691)
T KOG2048|consen  190 HIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIF-GTLIQSHSCHDADVLALAVADNEDRVFSAGVDPK  268 (691)
T ss_pred             EEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccC-cchhhhhhhhhcceeEEEEcCCCCeEEEccCCCc
Confidence            2                    111335689999999999999998 7889999999999999999999999999999999


Q ss_pred             EEEEEcCCCce---eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         142 LRLYLAHQGHS---RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       142 v~v~d~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |..|...+...   .......|...|.+++..++  .+++|+.|..+.+-....
T Consensus       269 ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  269 IIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSRE  320 (691)
T ss_pred             eEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccc
Confidence            99999887654   22224678889999999887  888999999888766554

>KOG1188|consensus

Probab=99.83  E-value=1.2e-18  Score=119.29  Aligned_cols=178  Identities=13%  Similarity=0.210  Sum_probs=135.6

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCCCc----cccc---
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLNSP----LNVH---   85 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~~~----~~~~---   85 (198)
                      +.+|++-..|.|++||..+++.+..++.+  +..++.+.|..+ +...+.+++.||.|++||+|...+.    +..+   
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~--~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~  118 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGP--PATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGT  118 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCC--CCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCC
Confidence            45888889999999999998888888765  455678888764 6677777889999999999864421    1122   


Q ss_pred             ---------cCceEEEec----CCCcEEEEEccCCCcceeee-cCCCcceEEEEEccC-CCEEEEeecCCcEEEEEcCCC
Q psy8758          86 ---------KDMTSAAAN----EDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        86 ---------~~~~~~~~~----~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~~  150 (198)
                               ...+++.|+    .+-.+.+||.|...+++..+ +.|.+.|+++.|+|. -+.|++|+.||-|.+||++..
T Consensus       119 ~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d  198 (376)
T KOG1188|consen  119 PFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD  198 (376)
T ss_pred             cceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence                     223445443    35668999999865656555 679999999999996 458999999999999999864


Q ss_pred             ce----eeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCcc
Q psy8758         151 HS----RDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       151 ~~----~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ..    +..  ..|...|..+.|..++ +.|.+-+..+...+|+++.+.+
T Consensus       199 ~EeDaL~~v--iN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~  246 (376)
T KOG1188|consen  199 NEEDALLHV--INHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSE  246 (376)
T ss_pred             cchhhHHHh--hcccceeeeeeeecCCcceEEEEEccCceeEEEccCCCh
Confidence            22    222  2455789999999877 4577788899999999988764

>KOG2096|consensus

Probab=99.82  E-value=8.8e-19  Score=119.24  Aligned_cols=176  Identities=14%  Similarity=0.208  Sum_probs=127.0

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC----
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN----   79 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~----   79 (198)
                      |-.+-...++.+|++++.|..|.+|++. |+.+..+....  ..-...+.+|+|++++++| ..-.+++|.+--.+    
T Consensus       190 ~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq--~~n~~aavSP~GRFia~~g-FTpDVkVwE~~f~kdG~f  265 (420)
T KOG2096|consen  190 IINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQ--SSNYDAAVSPDGRFIAVSG-FTPDVKVWEPIFTKDGTF  265 (420)
T ss_pred             eEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccc--ccccceeeCCCCcEEEEec-CCCCceEEEEEeccCcch
Confidence            4445566788999999999999999997 77777766543  2346788999999999875 67789999864211    


Q ss_pred             ------CccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeec--------------CCCcceEEEEEcc
Q psy8758          80 ------SPLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHK--------------DMTSAVTSVDYSP  128 (198)
Q Consensus        80 ------~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~--------------~~~~~i~~~~~sp  128 (198)
                            ..+.+|..           ...++.+.||+.++||.    .......              ...+....++++|
T Consensus       266 qev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdt----dVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP  341 (420)
T KOG2096|consen  266 QEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDT----DVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSP  341 (420)
T ss_pred             hhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeec----cceEecCCCchHhhcCCcchhhcCCCceEEEeCC
Confidence                  12344443           23677788888888883    3322211              1112334678888


Q ss_pred             CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         129 TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       129 ~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      +|+.|+.+. ...+++|..++++....+...|...|.+++|+++|+++++++ |..+++..
T Consensus       342 ~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  342 SGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             CCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            888777654 356888888888777777778889999999999999999987 67788775

>KOG0649|consensus

Probab=99.82  E-value=2.2e-18  Score=113.34  Aligned_cols=185  Identities=12%  Similarity=0.171  Sum_probs=132.5

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCc--------eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASE--------KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      |..-+|+|.+++|++|..+|+|.++.+.+-.        ....+....|.++++.++|.  ..+++++  .||.|+-|.-
T Consensus        13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~--gdG~V~gw~W   88 (325)
T KOG0649|consen   13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSG--GDGLVYGWEW   88 (325)
T ss_pred             HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeec--cCceEEEeee
Confidence            5566899999999999999999999886311        11122223378899999998  4556654  4699988765


Q ss_pred             cCCCC------cc----c----------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC
Q psy8758          76 RQLNS------PL----N----------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT  129 (198)
Q Consensus        76 ~~~~~------~~----~----------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~  129 (198)
                      +....      .+    .                ......++.++.|+.++.||+++ ++..+.+++|.+.+.+++--..
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~-G~i~r~~rGHtDYvH~vv~R~~  167 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLED-GRIQREYRGHTDYVHSVVGRNA  167 (325)
T ss_pred             hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecC-CEEEEEEcCCcceeeeeeeccc
Confidence            42211      00    0                01123355666999999999999 8888999999999999998555


Q ss_pred             CCEEEEeecCCcEEEEEcCCCceeeEEecc--------C-cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         130 GREFVAGGYDKSLRLYLAHQGHSRDIYHTK--------R-MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~--------~-~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ...+++|+.||++|+||+++++.+..+...        | ...|.+++-  +..+|++|+ .-.+.+|+++..++.
T Consensus       168 ~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t  240 (325)
T KOG0649|consen  168 NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSEST  240 (325)
T ss_pred             CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCce
Confidence            557899999999999999999988776221        1 234555544  455777654 567999999887654

>KOG1009|consensus

Probab=99.82  E-value=2.9e-19  Score=124.61  Aligned_cols=176  Identities=18%  Similarity=0.304  Sum_probs=133.7

Q ss_pred             cceeEEEECCCCc-eEEEeeCCCeEEEEEccCCce------eeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEK------LGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      ++|..+.|.+++. .+++|+.|..|++|.+..+..      +.-+..+ .|...|+.+.|+|+|+.+++ |+++|.+.+|
T Consensus        14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLAS-g~D~g~v~lW   92 (434)
T KOG1009|consen   14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLAS-GGDGGEVFLW   92 (434)
T ss_pred             CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeee-cCCCceEEEE
Confidence            5788999998776 999999999999998864321      1112222 27888999999999998876 5689999999


Q ss_pred             eccCCCCccccccCceEEEecCCCcEEEEEccC-CCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQ-LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                      ..... .++           ..|..   -++.. .....+...+|...+..++|+|++.++++++.|+.+++||+..|..
T Consensus        93 k~~~~-~~~-----------~~d~e---~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l  157 (434)
T KOG1009|consen   93 KQGDV-RIF-----------DADTE---ADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQL  157 (434)
T ss_pred             EecCc-CCc-----------cccch---hhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEecccee
Confidence            87631 000           00000   00000 0123345567899999999999999999999999999999999999


Q ss_pred             eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .... ..|...+..++|.|-++++++-+.|...+.+.+...+
T Consensus       158 ~~~~-~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~  198 (434)
T KOG1009|consen  158 LAIL-DDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQ  198 (434)
T ss_pred             Eeec-cccccccceeecchhhhhhhhhccCcccceeeeeeee
Confidence            8877 7888999999999999999998888877777765543

>KOG0290|consensus

Probab=99.82  E-value=8.2e-19  Score=117.91  Aligned_cols=189  Identities=15%  Similarity=0.258  Sum_probs=138.8

Q ss_pred             ceeEEEECCCCc-----eEEEeeCCCeEEEEEccCCceeee-------eeeeeecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           3 HVTHTVWSLDNK-----FVISASDEMNLRVWKAHASEKLGP-------IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         3 ~v~~~~~s~~~~-----~l~~~~~d~~i~i~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      +++.+.|.|+..     +||+.+ | .+|+|.+...+....       -+...+..+++++.|+.-...++.+++-|-++
T Consensus        98 P~tK~~wiPd~~g~~pdlLATs~-D-~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTC  175 (364)
T KOG0290|consen   98 PVTKLMWIPDSKGVYPDLLATSS-D-FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTC  175 (364)
T ss_pred             CccceEecCCccccCcchhhccc-C-eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeE
Confidence            578889999763     555543 3 799999874221111       11223567889999998888888888899999


Q ss_pred             EEEeccCC-----CCcccccc------------CceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccC-C
Q psy8758          71 YSYDIRQL-----NSPLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPT-G  130 (198)
Q Consensus        71 ~~~d~~~~-----~~~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~-~  130 (198)
                      .+||++..     +..+-.|.            ..++++.+.||.++++|++......-.++.  ...+...++|++. -
T Consensus       176 TiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDp  255 (364)
T KOG0290|consen  176 TIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDP  255 (364)
T ss_pred             EEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCc
Confidence            99999875     22233333            346999999999999999974433223332  2457888999885 4


Q ss_pred             CEEEEeecC-CcEEEEEcCCCceeeEEeccCcccEEEEEEcCC-CCEEEEecCCCeEEEEecCCC
Q psy8758         131 REFVAGGYD-KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       131 ~~l~~~~~d-~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +++|+-..| ..|.+.|++..........+|.+.|+.++|.|. ...|+++++|..+.+||+.+.
T Consensus       256 nymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~  320 (364)
T KOG0290|consen  256 NYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM  320 (364)
T ss_pred             hHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence            578877665 579999999866544445899999999999996 458999999999999999753

>KOG1274|consensus

Probab=99.82  E-value=4e-18  Score=129.47  Aligned_cols=165  Identities=15%  Similarity=0.181  Sum_probs=132.2

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      ++.+++++-+|+++|.|++|-.|++-++.+......++.  |..+|.++.|+|.+.+|+++ +.||++++||+.....  
T Consensus        98 p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrg--h~apVl~l~~~p~~~fLAvs-s~dG~v~iw~~~~~~~~~  174 (933)
T KOG1274|consen   98 PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRG--HDAPVLQLSYDPKGNFLAVS-SCDGKVQIWDLQDGILSK  174 (933)
T ss_pred             cceEEEEecCCcEEEeecCceeEEEEeccccchheeecc--cCCceeeeeEcCCCCEEEEE-ecCceEEEEEcccchhhh
Confidence            688999999999999999999999999988776666665  58899999999999999886 6899999999975431  


Q ss_pred             ------------------ccccccC-ceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeecC
Q psy8758          81 ------------------PLNVHKD-MTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYD  139 (198)
Q Consensus        81 ------------------~~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d  139 (198)
                                        ....|++ ..++....|+.|.+|+... ......+.  .+...+..++|+|+|+|||+++.|
T Consensus       175 tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~-we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~  253 (933)
T KOG1274|consen  175 TLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKG-WELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLD  253 (933)
T ss_pred             hcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCC-ceeheeecccccccceEEEEEcCCCcEEeeeccC
Confidence                              1223333 5688889999999999987 45544443  244458999999999999999999


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEE
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV  176 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  176 (198)
                      |.|.|||.++.+. .    .....|.+++|.|+..-+
T Consensus       254 g~I~vWnv~t~~~-~----~~~~~Vc~~aw~p~~n~i  285 (933)
T KOG1274|consen  254 GQILVWNVDTHER-H----EFKRAVCCEAWKPNANAI  285 (933)
T ss_pred             CcEEEEecccchh-c----cccceeEEEecCCCCCee
Confidence            9999999998322 1    123689999999987644

>KOG2394|consensus

Probab=99.81  E-value=5.1e-19  Score=127.55  Aligned_cols=179  Identities=15%  Similarity=0.254  Sum_probs=126.7

Q ss_pred             CCCceEEEeeCCCeEEEEEccCCceeeeeee--eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC----cccc
Q psy8758          11 LDNKFVISASDEMNLRVWKAHASEKLGPIRK--VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS----PLNV   84 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~----~~~~   84 (198)
                      |++--++.|-..|.+++.|....+..+.+..  +.....++++.|-|.++.+|.+.-.+|.+++||......    .+..
T Consensus       183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~  262 (636)
T KOG2394|consen  183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA  262 (636)
T ss_pred             CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence            4555677788888999888765322221211  123467999999998888888888899999998742211    1111


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccE
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV  164 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v  164 (198)
                      +++.      ..-.|..|--.....|+..+.-....|+..+|+|||++||+.++||.+||||..+.+++...+ .--+..
T Consensus       263 ~k~~------~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mk-SYFGGL  335 (636)
T KOG2394|consen  263 LKDG------DQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMK-SYFGGL  335 (636)
T ss_pred             cCCC------CeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHH-hhccce
Confidence            1111      111122222222135555555556689999999999999999999999999999987766542 223679


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         165 THTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       165 ~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+++|||||++|++|++|..|.||.+..++.+
T Consensus       336 LCvcWSPDGKyIvtGGEDDLVtVwSf~erRVV  367 (636)
T KOG2394|consen  336 LCVCWSPDGKYIVTGGEDDLVTVWSFEERRVV  367 (636)
T ss_pred             EEEEEcCCccEEEecCCcceEEEEEeccceEE
Confidence            99999999999999999999999999988765

>KOG0642|consensus

Probab=99.81  E-value=1.7e-18  Score=125.25  Aligned_cols=190  Identities=16%  Similarity=0.234  Sum_probs=146.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccC-----Cceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHA-----SEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-----~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .|..++|.|-...|++++.||.+.+|+++.     .....++..+. |.++|.|++..+++..+++ |+.||+|+.|++.
T Consensus       296 ~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ys-gg~Dg~I~~w~~p  374 (577)
T KOG0642|consen  296 CIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYS-GGIDGTIRCWNLP  374 (577)
T ss_pred             hhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEe-eccCceeeeeccC
Confidence            467788888888999999999999999942     12233343333 7899999999999999987 5699999999776


Q ss_pred             CCC------------CccccccCc-----------eEEEecCCCcEEEEEccCCCcc-----------------------
Q psy8758          77 QLN------------SPLNVHKDM-----------TSAAANEDFNLYSYDIRQLNSP-----------------------  110 (198)
Q Consensus        77 ~~~------------~~~~~~~~~-----------~~~~~~~~~~i~~~d~~~~~~~-----------------------  110 (198)
                      ...            ..+.+|.+.           .+++++.||+++.|+.... .+                       
T Consensus       375 ~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~-~~~~f~~~~e~g~Plsvd~~ss~~a  453 (577)
T KOG0642|consen  375 PNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEE-SPCTFGEPKEHGYPLSVDRTSSRPA  453 (577)
T ss_pred             CCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCc-CccccCCccccCCcceEeeccchhH
Confidence            322            234444443           3889999999999987542 11                       


Q ss_pred             ---------------------eeeecC-------CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcc
Q psy8758         111 ---------------------LNVHKD-------MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus       111 ---------------------~~~~~~-------~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                                           +..+..       ....+..+.++|.+.+.+++..|+.|+++|..++..+... ..|..
T Consensus       454 ~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~-~a~~~  532 (577)
T KOG0642|consen  454 HSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSM-VAHKD  532 (577)
T ss_pred             hhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchhe-eeccc
Confidence                                 000000       0123567888888889999999999999999999998876 67888


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .++++++.|+|-+|++++.|+.+++|.+....+
T Consensus       533 svtslai~~ng~~l~s~s~d~sv~l~kld~k~~  565 (577)
T KOG0642|consen  533 SVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTC  565 (577)
T ss_pred             eecceeecCCCceEEeecCCceeehhhccchhe
Confidence            999999999999999999999999999865443

>KOG1445|consensus

Probab=99.81  E-value=1.3e-19  Score=133.41  Aligned_cols=160  Identities=18%  Similarity=0.286  Sum_probs=121.6

Q ss_pred             ceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeee----ee-eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIR----KV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~----~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .|+++.|.| |.+.||++++||.|++|.+..+.......    .. .|...|+++.|+|--..++++++.|-+|++||++
T Consensus       629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~  708 (1012)
T KOG1445|consen  629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA  708 (1012)
T ss_pred             eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence            488999999 77899999999999999997654322111    11 2677899999999766666666778888888877


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      +                              .+....+.+|.+.|..++|||+|+.+++.+.||++++|+.++++.....
T Consensus       709 ~------------------------------~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~E  758 (1012)
T KOG1445|consen  709 N------------------------------AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYE  758 (1012)
T ss_pred             h------------------------------hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCcccc
Confidence            6                              4566678899999999999999999999999999999999987654332


Q ss_pred             ecc-CcccEEEEEEcCCCCEEEEecCC----CeEEEEecCC
Q psy8758         157 HTK-RMQHVTHTVWSLDNKFVISASDE----MNLRVWKAHA  192 (198)
Q Consensus       157 ~~~-~~~~v~~~~~s~~~~~l~~~~~d----g~v~~w~~~~  192 (198)
                      ..+ -...-..+.|.-||+++++.+.|    ..|.+||.++
T Consensus       759 g~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~  799 (1012)
T KOG1445|consen  759 GKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT  799 (1012)
T ss_pred             CCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence            111 12334557788899988877655    4577777654

>KOG1445|consensus

Probab=99.81  E-value=4.3e-19  Score=130.67  Aligned_cols=163  Identities=14%  Similarity=0.256  Sum_probs=124.0

Q ss_pred             ECCCCceEEE--eeCCCeEEEEEccCCc-eee-eeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758           9 WSLDNKFVIS--ASDEMNLRVWKAHASE-KLG-PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV   84 (198)
Q Consensus         9 ~s~~~~~l~~--~~~d~~i~i~~~~~~~-~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~   84 (198)
                      |+.+.+++|+  .+..|.|-||++.... ... .+........|+.+.|.|-...-++.+.+||.|++|.+....-.-  
T Consensus       587 fcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e--  664 (1012)
T KOG1445|consen  587 FCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE--  664 (1012)
T ss_pred             eeeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCc--
Confidence            3344455554  3567899999997543 222 122333456789999999554444445689999999986431100  


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEEEcCCCceeeEEeccCccc
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH  163 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~  163 (198)
                                           ....+...++.|...|+++.|+|- ...|+++++|.+|++||+.+.+....+ .+|.+.
T Consensus       665 ---------------------~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l-~gHtdq  722 (1012)
T KOG1445|consen  665 ---------------------NEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRL-VGHTDQ  722 (1012)
T ss_pred             ---------------------ccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhhee-ccCcCc
Confidence                                 013567788899999999999996 568999999999999999999887776 799999


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |.+++|||||+.+|+.+.||++++|+.+.++.
T Consensus       723 If~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~  754 (1012)
T KOG1445|consen  723 IFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ  754 (1012)
T ss_pred             eeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence            99999999999999999999999999987653

>KOG1310|consensus

Probab=99.80  E-value=9.6e-18  Score=121.64  Aligned_cols=193  Identities=17%  Similarity=0.228  Sum_probs=140.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +-|+|++|+.+|.+|++|++|-.+.|||....+.+..+.+ .|...|.++.|-|. +..++.+|..|..|+++|+...+.
T Consensus        51 GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~T-gHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~  129 (758)
T KOG1310|consen   51 GCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIST-GHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKE  129 (758)
T ss_pred             ceecceeecCCCCEEeecCCcceEEeecchhcceeeeeec-ccccceeEEeeeccCCCeEEEeccCcceEEEEecccccc
Confidence            5699999999999999999999999999987666666654 47888999999994 566777788999999999975221


Q ss_pred             ------------cccc------------ccCceEEEecCCCcEEEEEccCCCcceeee---------cCCCcceEEEEEc
Q psy8758          81 ------------PLNV------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVH---------KDMTSAVTSVDYS  127 (198)
Q Consensus        81 ------------~~~~------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~s  127 (198)
                                  .+..            ..+.++.++++||+++-+|++.+..+-...         ...--...++..+
T Consensus       130 ~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltis  209 (758)
T KOG1310|consen  130 GGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTIS  209 (758)
T ss_pred             cccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeec
Confidence                        1111            223579999999999999999743222111         1112346789999


Q ss_pred             cCCC-EEEEeecCCcEEEEEcCC--------Cc----------eeeEEeccCc-----------ccEEEEEEcCCCCEEE
Q psy8758         128 PTGR-EFVAGGYDKSLRLYLAHQ--------GH----------SRDIYHTKRM-----------QHVTHTVWSLDNKFVI  177 (198)
Q Consensus       128 p~~~-~l~~~~~d~~v~v~d~~~--------~~----------~~~~~~~~~~-----------~~v~~~~~s~~~~~l~  177 (198)
                      |... +|++|+.|-..++||.+.        +.          ++..+..+|-           ...+-+.|+|+|.-|+
T Consensus       210 p~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElL  289 (758)
T KOG1310|consen  210 PSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELL  289 (758)
T ss_pred             CCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECCCCcEEE
Confidence            9754 889999999999999442        11          1223323332           1257788999998777


Q ss_pred             EecCCCeEEEEecCCCcc
Q psy8758         178 SASDEMNLRVWKAHASEK  195 (198)
Q Consensus       178 ~~~~dg~v~~w~~~~~~~  195 (198)
                      ..-....|+++|+..++.
T Consensus       290 vs~~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  290 VSWGGEHVYLFDVNEDKS  307 (758)
T ss_pred             EeeCCeEEEEEeecCCCC
Confidence            665566899999987664

>KOG2106|consensus

Probab=99.80  E-value=4.9e-17  Score=116.75  Aligned_cols=187  Identities=16%  Similarity=0.259  Sum_probs=141.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCce-----------eee---------------------------eeeee
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK-----------LGP---------------------------IRKVV   43 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~-----------~~~---------------------------~~~~~   43 (198)
                      +.|.++..-.+|.++- |+.|..|..||-.-.+.           ++.                           +....
T Consensus       288 ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~g  366 (626)
T KOG2106|consen  288 GGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQG  366 (626)
T ss_pred             CceEEEEEecCccEee-cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEe
Confidence            5688888888888665 99999999998421110           000                           01122


Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC---------CccccccCceEEEecCCCcEEEEEccCCCcceeee
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN---------SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH  114 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~  114 (198)
                      |......++-+|+.+.++++ +.|+.+++|+-....         .....|+..+++.|+..|...+.|.++ ...+...
T Consensus       367 h~delwgla~hps~~q~~T~-gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~-~~lv~~~  444 (626)
T KOG2106|consen  367 HGDELWGLATHPSKNQLLTC-GQDKHVRLWNDHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFVLDTET-QDLVTIH  444 (626)
T ss_pred             cccceeeEEcCCChhheeec-cCcceEEEccCCceeEEEEecCceeEeeccCcceEEEeeccceEEEEeccc-ceeEEEE
Confidence            45566788899998888876 599999999932211         234456667999999999999999998 4444444


Q ss_pred             cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc-eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         115 KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH-SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       115 ~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      .. ..++++++|+|+|.+||.|+.|+.|++|-+.... .......-+.++|+.+.||+|+++|.+-+.|-.|..|....
T Consensus       445 ~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~  522 (626)
T KOG2106|consen  445 TD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSE  522 (626)
T ss_pred             ec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEcccc
Confidence            44 8899999999999999999999999999997643 33333334458999999999999999999999999995443

>KOG1523|consensus

Probab=99.80  E-value=5.6e-18  Score=115.15  Aligned_cols=161  Identities=18%  Similarity=0.294  Sum_probs=130.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++|+|.+|++|++.+|.+.+...+.||.....+.......+. |...|+.++|+|..+.|+++ +.|.+-++|.......
T Consensus        11 ~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtc-s~drnayVw~~~~~~~   89 (361)
T KOG1523|consen   11 EPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTC-SHDRNAYVWTQPSGGT   89 (361)
T ss_pred             CceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEc-cCCCCccccccCCCCe
Confidence            689999999999999999999999999987665444444333 68889999999999999875 6899999998753210


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCcee---eEEe
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR---DIYH  157 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~---~~~~  157 (198)
                                                 -++...+..+....+++.|+|.++.+|+|+.-..|.||-++...--   ..+.
T Consensus        90 ---------------------------WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhik  142 (361)
T KOG1523|consen   90 ---------------------------WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIK  142 (361)
T ss_pred             ---------------------------eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhC
Confidence                                       2455566668889999999999999999999999999988764432   1123


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ..+...|.+++|+|++-+|++|+.|+.++++..
T Consensus       143 kPirStv~sldWhpnnVLlaaGs~D~k~rVfSa  175 (361)
T KOG1523|consen  143 KPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSA  175 (361)
T ss_pred             CccccceeeeeccCCcceecccccCcceeEEEE
Confidence            456688999999999999999999999999864

>KOG4283|consensus

Probab=99.79  E-value=4.4e-18  Score=114.80  Aligned_cols=132  Identities=15%  Similarity=0.255  Sum_probs=109.0

Q ss_pred             cceeEEEECCCC---ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSLDN---KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~---~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +.|+.-++||-.   -++|+|..|-+|++.|+.+|.....+..+  ...|.++.|+|..++++++|+.||.|++||++. 
T Consensus       144 ~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGH--r~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRr-  220 (397)
T KOG4283|consen  144 GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGH--RDGVLAVEWSPSSEWVLATGSADGAIRLWDIRR-  220 (397)
T ss_pred             ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccc--cCceEEEEeccCceeEEEecCCCceEEEEEeec-
Confidence            457777888844   37888889999999999999887777764  778999999999999999999999999999997 


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCC-Ccc-eeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQL-NSP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                                      ..|..++.|..+. ..+ ++.-..|.+.++.++|..+++++++++.|..+++|+..+|+.
T Consensus       221 ----------------asgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~n  280 (397)
T KOG4283|consen  221 ----------------ASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRN  280 (397)
T ss_pred             ----------------ccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcc
Confidence                            3456667776552 122 333467899999999999999999999999999999987653

>KOG1524|consensus

Probab=99.79  E-value=3.3e-18  Score=123.70  Aligned_cols=165  Identities=16%  Similarity=0.298  Sum_probs=124.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC--CC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ--LN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~--~~   79 (198)
                      ++|.+-.|+|||.-|+++++||.|++|.- +|-.-..+..  ...+|.|++|.|+.+.++.+.  .+.+.+=.+..  ..
T Consensus       105 ~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q--~~~~v~c~~W~p~S~~vl~c~--g~h~~IKpL~~n~k~  179 (737)
T KOG1524|consen  105 AAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQ--NEESIRCARWAPNSNSIVFCQ--GGHISIKPLAANSKI  179 (737)
T ss_pred             hhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhh--cCceeEEEEECCCCCceEEec--CCeEEEeecccccce
Confidence            45778899999999999999999999985 3422222222  366799999999999888864  44555444433  22


Q ss_pred             CccccccC-----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          80 SPLNVHKD-----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        80 ~~~~~~~~-----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..++.|.+           .++++|++|...++||-.  +.++.....|..+|++++|+|+ +.++.++. +++|     
T Consensus       180 i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~--G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R-----  250 (737)
T KOG1524|consen  180 IRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ--GANLFTSAAEEYAITSVAFNPE-KDYLLWSY-NTAR-----  250 (737)
T ss_pred             eEEeccCcEEEEeecCccccceeecCCceeEEeeccc--CcccccCChhccceeeeeeccc-cceeeeee-eeee-----
Confidence            33445544           468999999999999987  5788888889999999999999 66666654 3333     


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                             +.....+.|..++||+||..++.|+..|.+.+
T Consensus       251 -------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  251 -------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             -------ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence                   33445578999999999999999988887654

>KOG1034|consensus

Probab=99.79  E-value=2e-17  Score=112.88  Aligned_cols=164  Identities=12%  Similarity=0.214  Sum_probs=118.8

Q ss_pred             cceeEEEECC-----CCceEEEeeCCCeEEEEEccCCceeeeeeeee---ecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSL-----DNKFVISASDEMNLRVWKAHASEKLGPIRKVV---MSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~-----~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      .+|..++|++     +...+++.+. ..+.+|........+.++...   ++.....++|                  .|
T Consensus        39 ~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw------------------~y   99 (385)
T KOG1034|consen   39 KPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSW------------------SY   99 (385)
T ss_pred             CccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEE------------------Ee
Confidence            4678888874     2245666554 468888875433222222221   2222233333                  23


Q ss_pred             eccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCcEEEEEcCCCce
Q psy8758          74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                      |..+        .++++++++.-|.|++.|+.+ .+....+.+|...|+.+.+.|+. +++++++.|..|++|++++..+
T Consensus       100 d~~~--------~~p~la~~G~~GvIrVid~~~-~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~C  170 (385)
T KOG1034|consen  100 DSNT--------GNPFLAAGGYLGVIRVIDVVS-GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVC  170 (385)
T ss_pred             cCCC--------CCeeEEeecceeEEEEEecch-hhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeE
Confidence            3322        234555556666666666666 68888899999999999999975 5889999999999999999999


Q ss_pred             eeEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         153 RDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       153 ~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +..+  ..+|...|.++.|+++|.++++++.|-.+++|+++..
T Consensus       171 v~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~  213 (385)
T KOG1034|consen  171 VAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVK  213 (385)
T ss_pred             EEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence            8887  5688999999999999999999999999999999854

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.79  E-value=5.7e-16  Score=111.86  Aligned_cols=189  Identities=8%  Similarity=0.071  Sum_probs=126.9

Q ss_pred             ceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ....++++|++++|++++ .++.|.+|++.....+..............++|+|+++.++++...++.+.+|++....  
T Consensus        36 ~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~  115 (330)
T PRK11028         36 QVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIP  115 (330)
T ss_pred             CCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCC
Confidence            356789999999887764 57889999996322233333333334567899999999999887678999999986321  


Q ss_pred             ----Ccccc-----------ccCceEEEecCCCcEEEEEccCCCcce------eeecCCCcceEEEEEccCCCEEEEeec
Q psy8758          80 ----SPLNV-----------HKDMTSAAANEDFNLYSYDIRQLNSPL------NVHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        80 ----~~~~~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~------~~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                          .....           ....++++...++.|.+||+.+.+...      .... .......++|+|+|+++++++.
T Consensus       116 ~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~  194 (330)
T PRK11028        116 VAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNE  194 (330)
T ss_pred             CCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEec
Confidence                11111           112345667778999999997632221      1111 2334678999999999988776


Q ss_pred             -CCcEEEEEcCC--Cce--eeEEec--c---CcccEEEEEEcCCCCEEEEec-CCCeEEEEecCC
Q psy8758         139 -DKSLRLYLAHQ--GHS--RDIYHT--K---RMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHA  192 (198)
Q Consensus       139 -d~~v~v~d~~~--~~~--~~~~~~--~---~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~  192 (198)
                       ++.|.+|+++.  ++.  ...+..  .   +......+.++|++++++++. .++.|.+|++++
T Consensus       195 ~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~  259 (330)
T PRK11028        195 LNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSE  259 (330)
T ss_pred             CCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeC
Confidence             89999999974  332  222211  1   112334688999999988875 478999999854

>KOG4378|consensus

Probab=99.79  E-value=4.9e-17  Score=116.69  Aligned_cols=169  Identities=14%  Similarity=0.229  Sum_probs=138.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|+++.++....+||+++..|.|.|..+.++....++.. .....|.-+.|+|..+.++.+.+++|.+.+||+......
T Consensus       122 stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~-~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~  200 (673)
T KOG4378|consen  122 STVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTI-DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPI  200 (673)
T ss_pred             ceeEEEEecCCcceeEEeccCCcEEEEecccCccccceec-CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcc
Confidence            3589999999999999999999999999988876555553 234556789999999999999999999999999865433


Q ss_pred             ---------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          82 ---------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        82 ---------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                                     +.+....++++.+.|.+|.+||.+. ......+. ...+...++|+|+|.+|+.|+..|.|..||
T Consensus       201 ~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s-~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD  278 (673)
T KOG4378|consen  201 FHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS-QASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYD  278 (673)
T ss_pred             cchhhhccCCcCcceecCCccceEEEecccceEEEeeccc-ccccceee-ecCCcceeeecCCceEEEeecCCceEEEEe
Confidence                           2233446799999999999999996 34444443 456789999999999999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCC
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDN  173 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~  173 (198)
                      ++..+........|...|++++|-|..
T Consensus       279 ~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  279 MRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             cccCCCCceEeeecccceeEEEeeecc
Confidence            998766555557888899999998764

>KOG1587|consensus

Probab=99.79  E-value=2.1e-17  Score=123.64  Aligned_cols=190  Identities=15%  Similarity=0.158  Sum_probs=138.6

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCce--eee--eeeeeecCceeeEEeCCCCCe--EEEEecCCccEEEEe
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEK--LGP--IRKVVMSLRSNMVSWNPMEAF--VFTAANEDFNLYSYD   74 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~--~~~--~~~~~~~~~v~~~~~~~~~~~--~~~~~~~d~~i~~~d   74 (198)
                      .+|.++.|+| +..+++.|..+|+|.+||+..+..  ...  .....|..++..+.|..+...  ++++ +.||.|+.|+
T Consensus       243 s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~-ssDG~i~~W~  321 (555)
T KOG1587|consen  243 SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSL-SSDGSICSWD  321 (555)
T ss_pred             CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEE-ecCCcEeeee
Confidence            4689999999 567888888999999999986654  222  334457888999999765443  6664 6799999999


Q ss_pred             ccCCCCcc--------------------------ccccCceEEEecCCCcEEEEEc---cCCC----cceeeecCCCcce
Q psy8758          75 IRQLNSPL--------------------------NVHKDMTSAAANEDFNLYSYDI---RQLN----SPLNVHKDMTSAV  121 (198)
Q Consensus        75 ~~~~~~~~--------------------------~~~~~~~~~~~~~~~~i~~~d~---~~~~----~~~~~~~~~~~~i  121 (198)
                      ++....+.                          .......++.|+++|.|..-..   +...    +....+..|.+++
T Consensus       322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v  401 (555)
T KOG1587|consen  322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV  401 (555)
T ss_pred             ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence            87443221                          1112246999999999987433   2211    2233556688999


Q ss_pred             EEEEEccCCCEEEEeecCCcEEEEEcC-CCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCC
Q psy8758         122 TSVDYSPTGREFVAGGYDKSLRLYLAH-QGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       122 ~~~~~sp~~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +++.++|-+..++..+.|-+++||... ...++..+ ..+...+.+++|||-. ..++++..||.+.+||+...
T Consensus       402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~-~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~  474 (555)
T KOG1587|consen  402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL-DSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD  474 (555)
T ss_pred             EeeecCCCccceeeeeccceeEeccccCCCCcchhh-hhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence            999999988766665569999999988 44554444 4555679999999965 47778888999999999643

>KOG2394|consensus

Probab=99.78  E-value=1.5e-17  Score=120.05  Aligned_cols=136  Identities=18%  Similarity=0.251  Sum_probs=102.0

Q ss_pred             ceeEEEECCCC-ceEEEeeCCCeEEEEEccCC--------------ceeeee------------eeeeecCceeeEEeCC
Q psy8758           3 HVTHTVWSLDN-KFVISASDEMNLRVWKAHAS--------------EKLGPI------------RKVVMSLRSNMVSWNP   55 (198)
Q Consensus         3 ~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~--------------~~~~~~------------~~~~~~~~v~~~~~~~   55 (198)
                      .|+|+.|-|.+ ..++++-.+|.+++||..-.              ......            +-....+.|..++|+|
T Consensus       221 svT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~  300 (636)
T KOG2394|consen  221 SVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSP  300 (636)
T ss_pred             ceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEcC
Confidence            68999999955 46666678899999976311              000000            0011234677888888


Q ss_pred             CCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE
Q psy8758          56 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA  135 (198)
Q Consensus        56 ~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~  135 (198)
                      |+++|+++ +.||.++++|..+                              .+.+-.++..-+...|++|||||+++++
T Consensus       301 DG~~LA~V-SqDGfLRvF~fdt------------------------------~eLlg~mkSYFGGLLCvcWSPDGKyIvt  349 (636)
T KOG2394|consen  301 DGKYLATV-SQDGFLRIFDFDT------------------------------QELLGVMKSYFGGLLCVCWSPDGKYIVT  349 (636)
T ss_pred             CCceEEEE-ecCceEEEeeccH------------------------------HHHHHHHHhhccceEEEEEcCCccEEEe
Confidence            88888776 5777777777654                              3455555556678999999999999999


Q ss_pred             eecCCcEEEEEcCCCceeeEEeccCcccEEEEEEc
Q psy8758         136 GGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS  170 (198)
Q Consensus       136 ~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s  170 (198)
                      |+.|.-|.||.+..++.+..- .+|+.+|..++|.
T Consensus       350 GGEDDLVtVwSf~erRVVARG-qGHkSWVs~VaFD  383 (636)
T KOG2394|consen  350 GGEDDLVTVWSFEERRVVARG-QGHKSWVSVVAFD  383 (636)
T ss_pred             cCCcceEEEEEeccceEEEec-cccccceeeEeec
Confidence            999999999999999988876 7999999999998

>KOG0321|consensus

Probab=99.78  E-value=3e-17  Score=120.63  Aligned_cols=187  Identities=9%  Similarity=0.154  Sum_probs=128.8

Q ss_pred             EEEECC---CCceEEEeeCCCeEEEEEccCCcee---eeee-eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           6 HTVWSL---DNKFVISASDEMNLRVWKAHASEKL---GPIR-KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         6 ~~~~s~---~~~~l~~~~~d~~i~i~~~~~~~~~---~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +..|++   ....|+.+.+||.|.++|.....-.   ..+. ...|...|..+.|.| ++..+++.+.|.+++.||+.+.
T Consensus        54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s  132 (720)
T KOG0321|consen   54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTS  132 (720)
T ss_pred             cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeeccc
Confidence            456665   3358899999999999998543211   1122 223788899999999 6666666789999999999864


Q ss_pred             CC----ccccc------------cCceEEEecCCCcEEEEEccCCC-------------------ccee-------eecC
Q psy8758          79 NS----PLNVH------------KDMTSAAANEDFNLYSYDIRQLN-------------------SPLN-------VHKD  116 (198)
Q Consensus        79 ~~----~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~-------------------~~~~-------~~~~  116 (198)
                      ..    .+.+|            ...++++|+.||.+.+||++-..                   .+.+       ....
T Consensus       133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA  212 (720)
T KOG0321|consen  133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA  212 (720)
T ss_pred             eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence            31    23333            34679999999999999987421                   0111       1122


Q ss_pred             CCcceEE---EEEccCCCEEEEeec-CCcEEEEEcCCCceeeEEe-------ccC---cccEEEEEEcCCCCEEEEecCC
Q psy8758         117 MTSAVTS---VDYSPTGREFVAGGY-DKSLRLYLAHQGHSRDIYH-------TKR---MQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       117 ~~~~i~~---~~~sp~~~~l~~~~~-d~~v~v~d~~~~~~~~~~~-------~~~---~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      +...|.+   +.+..|...||+++. |+.|+|||++.........       ..|   .-.+.++.....|.+|.+.+.|
T Consensus       213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD  292 (720)
T KOG0321|consen  213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD  292 (720)
T ss_pred             ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence            3334555   556678889998887 9999999999754432210       111   2356777777778888888889


Q ss_pred             CeEEEEecCCC
Q psy8758         183 MNLRVWKAHAS  193 (198)
Q Consensus       183 g~v~~w~~~~~  193 (198)
                      +.|+.|++.+-
T Consensus       293 ~sIy~ynm~s~  303 (720)
T KOG0321|consen  293 NSIYFYNMRSL  303 (720)
T ss_pred             CcEEEEecccc
Confidence            99999999763

>KOG1063|consensus

Probab=99.77  E-value=1.7e-17  Score=122.83  Aligned_cols=160  Identities=15%  Similarity=0.232  Sum_probs=126.0

Q ss_pred             ceeEEEECCCCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .|++++.+|+|+++|++...     -.|++|+..+-.....+..  |.-.|+.++|+||+++|+++ +.|.++.+|....
T Consensus       527 Ev~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~--HsLTVT~l~FSpdg~~LLsv-sRDRt~sl~~~~~  603 (764)
T KOG1063|consen  527 EVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG--HSLTVTRLAFSPDGRYLLSV-SRDRTVSLYEVQE  603 (764)
T ss_pred             eEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc--cceEEEEEEECCCCcEEEEe-ecCceEEeeeeec
Confidence            58999999999999998654     3588999877665555544  57779999999999999987 6999999999854


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC--ceeeE
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG--HSRDI  155 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~--~~~~~  155 (198)
                      ....                          .......+.|..-|.+.+|+|++.+++|+|.|.+|++|.....  +.+..
T Consensus       604 ~~~~--------------------------e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~  657 (764)
T KOG1063|consen  604 DIKD--------------------------EFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISR  657 (764)
T ss_pred             ccch--------------------------hhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhh
Confidence            3110                          1122336789999999999999999999999999999999887  33333


Q ss_pred             -EeccCcccEEEEEEcC-C----CCEEEEecCCCeEEEEecC
Q psy8758         156 -YHTKRMQHVTHTVWSL-D----NKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       156 -~~~~~~~~v~~~~~s~-~----~~~l~~~~~dg~v~~w~~~  191 (198)
                       ....+...|+.++|.| +    +..++.|-+.|.|.+|...
T Consensus       658 ~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~  699 (764)
T KOG1063|consen  658 FACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK  699 (764)
T ss_pred             hchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence             2345678999999987 2    2367888899999999965

>KOG2111|consensus

Probab=99.77  E-value=1.9e-16  Score=107.75  Aligned_cols=160  Identities=9%  Similarity=0.093  Sum_probs=108.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .+|.++.++++  .|++. ..+.|++|... +.+....+.....+....+++-..+...|+.-|-.-|.|.+.|+...  
T Consensus        95 ~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~--  169 (346)
T KOG2111|consen   95 SEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLAST--  169 (346)
T ss_pred             cceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhc--
Confidence            45666666544  34333 24567777775 33444444433223333333322233333333333455555554432  


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCc-ceeeecCCCcceEEEEEccCCCEEEEeecCCc-EEEEEcCCCceeeEEec
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNS-PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS-LRLYLAHQGHSRDIYHT  158 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~-v~v~d~~~~~~~~~~~~  158 (198)
                                                 .. +-..+.+|...|.|++++-+|..+|++|..|+ |||||..+|+.+..++.
T Consensus       170 ---------------------------~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RR  222 (346)
T KOG2111|consen  170 ---------------------------KPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRR  222 (346)
T ss_pred             ---------------------------CcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeec
Confidence                                       22 34678899999999999999999999999986 89999999999988865


Q ss_pred             cC-cccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         159 KR-MQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       159 ~~-~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +- ...|.+++|||++.+||++|+-|+++|+.++..
T Consensus       223 G~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~  258 (346)
T KOG2111|consen  223 GVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT  258 (346)
T ss_pred             CCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence            53 367999999999999999999999999998753

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.77  E-value=1.8e-16  Score=117.97  Aligned_cols=178  Identities=13%  Similarity=0.051  Sum_probs=118.5

Q ss_pred             ceeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE--EeccC
Q psy8758           3 HVTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS--YDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~--~d~~~   77 (198)
                      .+...+|||||+.|+..+.+   ..|++||+.+++. ..+...  ......++|+||++.++.+.+.++.+.+  ||+..
T Consensus       205 ~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~-~~l~~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~  281 (429)
T PRK01742        205 PLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGAR-KVVASF--RGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANG  281 (429)
T ss_pred             ccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCce-EEEecC--CCccCceeECCCCCEEEEEEecCCcEEEEEEECCC
Confidence            57889999999999887643   4799999987653 223222  2234578999999999887666776554  56543


Q ss_pred             CCC-ccc------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          78 LNS-PLN------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        78 ~~~-~~~------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                      ... .+.            .....++++...++...+|++...+.....+ .+..  ...+|+|||++++..+.++ +.+
T Consensus       282 ~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~  357 (429)
T PRK01742        282 GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVK  357 (429)
T ss_pred             CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEE
Confidence            221 111            1112244455567778888775433333333 3332  4578999999998887765 666


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ||+.+++..... ...  ....+.|+|||++|+.++.++.+.+|.+
T Consensus       358 ~Dl~~g~~~~lt-~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        358 QDLTSGSTEVLS-STF--LDESPSISPNGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             EECCCCCeEEec-CCC--CCCCceECCCCCEEEEEEcCCCceEEEE
Confidence            999988765433 221  3356789999999999988888887775

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.77  E-value=8.1e-16  Score=111.05  Aligned_cols=189  Identities=12%  Similarity=0.158  Sum_probs=123.6

Q ss_pred             ceeEEEECCCCceEEEee-CCCeEEEEEccCCc-eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASE-KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ....++|+|+++++++++ .++.+.+|++++.. ....+...........++++|++++++++...++.|.+||+.....
T Consensus        81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~  160 (330)
T PRK11028         81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGH  160 (330)
T ss_pred             CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCc
Confidence            346799999999888876 47899999996432 2122222222234567889999999988877789999999975221


Q ss_pred             c------------------ccccc-CceEEEe-cCCCcEEEEEccCC-C--cceeeecCC------CcceEEEEEccCCC
Q psy8758          81 P------------------LNVHK-DMTSAAA-NEDFNLYSYDIRQL-N--SPLNVHKDM------TSAVTSVDYSPTGR  131 (198)
Q Consensus        81 ~------------------~~~~~-~~~~~~~-~~~~~i~~~d~~~~-~--~~~~~~~~~------~~~i~~~~~sp~~~  131 (198)
                      .                  +..++ +..+++. ..++.|.+|++... +  +.+..+...      ......+.++|+++
T Consensus       161 l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~  240 (330)
T PRK11028        161 LVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGR  240 (330)
T ss_pred             ccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCC
Confidence            0                  01111 1234444 45899999999742 1  122222211      12234688999999


Q ss_pred             EEEEeec-CCcEEEEEcCCCc-eeeEE-eccCcccEEEEEEcCCCCEEEEecC-CCeEEEEecC
Q psy8758         132 EFVAGGY-DKSLRLYLAHQGH-SRDIY-HTKRMQHVTHTVWSLDNKFVISASD-EMNLRVWKAH  191 (198)
Q Consensus       132 ~l~~~~~-d~~v~v~d~~~~~-~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~-dg~v~~w~~~  191 (198)
                      +++++.. ++.|.+|++.... ..... ...-......+.++|+|++|+++.. +++|.+|+++
T Consensus       241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        241 HLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             EEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            9988854 7899999996533 11111 1111134568899999999887664 8999999874

>KOG2919|consensus

Probab=99.77  E-value=2.6e-17  Score=112.30  Aligned_cols=177  Identities=15%  Similarity=0.182  Sum_probs=127.7

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEecCCccEEEEec--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI--   75 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~--   75 (198)
                      -.+++|+|||++|++|. ...|++||+. .|+.........     ..+.+.+++|+|.....++.|+....+-+|.-  
T Consensus       161 AhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~  239 (406)
T KOG2919|consen  161 AHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG  239 (406)
T ss_pred             heeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC
Confidence            46899999999999875 5689999994 443222222221     35667899999988877777877777655543  


Q ss_pred             cCCCCccccccCc-----------eEEEe-cCCCcEEEEEccCCCcceeeecCCCc-ce--EEEEEccCCCEEEEeecCC
Q psy8758          76 RQLNSPLNVHKDM-----------TSAAA-NEDFNLYSYDIRQLNSPLNVHKDMTS-AV--TSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        76 ~~~~~~~~~~~~~-----------~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~-~i--~~~~~sp~~~~l~~~~~d~  140 (198)
                      +.+...+-+|.+.           .+.+| -.+.+|..||++....++..+..|.. .-  -.....|++++|++|+.||
T Consensus       240 ~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG  319 (406)
T KOG2919|consen  240 RRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDG  319 (406)
T ss_pred             CCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCc
Confidence            3333444444432           34444 45788999999998888888877655 22  2345678999999999999


Q ss_pred             cEEEEEcCC-CceeeEEeccCcccEEEEEEcCCCCEEEEecCC
Q psy8758         141 SLRLYLAHQ-GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       141 ~v~v~d~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      .|++||++. +..+..+ ..+...++.++++|--.++|+++..
T Consensus       320 ~V~vwdlk~~gn~~sv~-~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  320 SVRVWDLKDLGNEVSVT-GNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             cEEEEecCCCCCccccc-ccccccccceecCcccceeeeccCc
Confidence            999999998 5545544 6777899999999998888887643

>KOG1272|consensus

Probab=99.75  E-value=4.6e-18  Score=120.75  Aligned_cols=185  Identities=12%  Similarity=0.117  Sum_probs=153.9

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-Cccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-SPLN   83 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~~~~   83 (198)
                      ..+.++.+|+.++.|+..|.+..+|..+++....+..   ...|.++.|-.+.++++++  ....+++||-.... ..+.
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v---~Etv~Dv~~LHneq~~AVA--QK~y~yvYD~~GtElHClk  207 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV---METVRDVTFLHNEQFFAVA--QKKYVYVYDNNGTELHCLK  207 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeeh---hhhhhhhhhhcchHHHHhh--hhceEEEecCCCcEEeehh
Confidence            4578889999999999999999999998886655554   4668899998887777664  57788999865321 2222


Q ss_pred             cc----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCcee
Q psy8758          84 VH----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR  153 (198)
Q Consensus        84 ~~----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~  153 (198)
                      .+          ....+++++..|.++.-|+.. ++.+..+....+.+..|+-+|-+..+-+|...|+|.+|.....+++
T Consensus       208 ~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~-GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePL  286 (545)
T KOG1272|consen  208 RHIRVARLEFLPYHFLLVAASEAGFLKYQDVST-GKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPL  286 (545)
T ss_pred             hcCchhhhcccchhheeeecccCCceEEEeech-hhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchH
Confidence            22          124688999999999999998 7888888888889999999999999999999999999999998887


Q ss_pred             eEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         154 DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..+ .-|.++|.++++.++|++++|.+.|..++|||++....+
T Consensus       287 vKi-LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql  328 (545)
T KOG1272|consen  287 VKI-LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQL  328 (545)
T ss_pred             HHH-HhcCCCcceEEECCCCcEEeecccccceeEeeecccccc
Confidence            766 578899999999999999999999999999999876543

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=3.4e-15  Score=111.07  Aligned_cols=182  Identities=12%  Similarity=0.080  Sum_probs=117.1

Q ss_pred             ceeEEEECCCCceEEEee---CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISAS---DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~---~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~   77 (198)
                      .+...+|||||+.|+..+   .+..+.+|++.+++. ..+...  ...+..+.|+||++.++.+.+.++  .|++||+.+
T Consensus       200 ~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~-~~l~~~--~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t  276 (429)
T PRK03629        200 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASF--PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS  276 (429)
T ss_pred             ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCe-EEccCC--CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence            577899999999888654   245789999987753 233222  233457899999999987655555  588899875


Q ss_pred             CCCc-cc----------cc-cCceE-EEecCCCc--EEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC---
Q psy8758          78 LNSP-LN----------VH-KDMTS-AAANEDFN--LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---  139 (198)
Q Consensus        78 ~~~~-~~----------~~-~~~~~-~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---  139 (198)
                      .... +.          .. .+..+ ++...++.  |+.+|+..  .....+...........|+|||++++..+.+   
T Consensus       277 g~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~--g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~  354 (429)
T PRK03629        277 GQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING--GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQ  354 (429)
T ss_pred             CCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC--CCeEEeecCCCCccCEEECCCCCEEEEEEccCCC
Confidence            4311 10          11 12223 33333444  44445554  2334444444455678999999998876543   


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCe---EEEEecCC
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN---LRVWKAHA  192 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~---v~~w~~~~  192 (198)
                      ..|.+||+.+++..... ..  .......|+|||++|+.++.++.   +.+++++.
T Consensus       355 ~~I~~~dl~~g~~~~Lt-~~--~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G  407 (429)
T PRK03629        355 QHIAKQDLATGGVQVLT-DT--FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDG  407 (429)
T ss_pred             ceEEEEECCCCCeEEeC-CC--CCCCCceECCCCCEEEEEEcCCCceEEEEEECCC
Confidence            35888999888755433 22  23456789999999988877654   67777753

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.73  E-value=1.6e-14  Score=106.49  Aligned_cols=191  Identities=21%  Similarity=0.363  Sum_probs=144.4

Q ss_pred             cceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..|.+++|+|+++.+++++. |+.+++|+...+.....+..  |...+.+++|+|++..++.+++.|+.+.+||......
T Consensus       156 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~  233 (466)
T COG2319         156 ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG--HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKL  233 (466)
T ss_pred             ccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc--CCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcE
Confidence            45788999999998888885 99999999987555555544  5788999999999985555557899999998663221


Q ss_pred             ---ccccccC----------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 ---PLNVHKD----------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 ---~~~~~~~----------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                         .+..|..          ..+++++.++.+++|+++........+..|...+.++.|+|++..+++++.|+.+.+||.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~  313 (466)
T COG2319         234 LRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDL  313 (466)
T ss_pred             EeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEc
Confidence               1222222          357789999999999999744424444667889999999998888888888988999999


Q ss_pred             CCCceeeEEe-ccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCc
Q psy8758         148 HQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASE  194 (198)
Q Consensus       148 ~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~  194 (198)
                      .......... ..|...+..+.|.+++..++.+ ..|+.+.+|++....
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  362 (466)
T COG2319         314 ETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK  362 (466)
T ss_pred             CCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence            8877665553 4666679999994343555555 678899999988764

>KOG1009|consensus

Probab=99.73  E-value=3e-15  Score=104.85  Aligned_cols=192  Identities=17%  Similarity=0.215  Sum_probs=129.3

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEcc--------C-----Cceeeeee-eeeecCceeeEEeCCCCCeEEEEecC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAH--------A-----SEKLGPIR-KVVMSLRSNMVSWNPMEAFVFTAANE   66 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~--------~-----~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~   66 (198)
                      .++|+++.|+|+|+.+|+|+++|.+.+|...        +     .+.....+ ...|...+..++|+|++.++++ ++.
T Consensus        65 ~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s-~s~  143 (434)
T KOG1009|consen   65 TRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVS-GSV  143 (434)
T ss_pred             cceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeee-eec
Confidence            3689999999999999999999999999875        2     11111111 1226778999999999999876 579


Q ss_pred             CccEEEEeccCCCC--ccccccC----------------------c-----------------e----------------
Q psy8758          67 DFNLYSYDIRQLNS--PLNVHKD----------------------M-----------------T----------------   89 (198)
Q Consensus        67 d~~i~~~d~~~~~~--~~~~~~~----------------------~-----------------~----------------   89 (198)
                      |..+++||+.....  .+..|..                      .                 .                
T Consensus       144 dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rL  223 (434)
T KOG1009|consen  144 DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRL  223 (434)
T ss_pred             cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeee
Confidence            99999999974331  0000000                      0                 0                


Q ss_pred             -----------EEEecCC-------------------CcEEEEEccCCCcceeeecCCCcceEEEEEccC----------
Q psy8758          90 -----------SAAANED-------------------FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT----------  129 (198)
Q Consensus        90 -----------~~~~~~~-------------------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~----------  129 (198)
                                 -.+.+.|                   +..++++-+....|...+.....+...+.++|-          
T Consensus       224 fhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~  303 (434)
T KOG1009|consen  224 FHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSE  303 (434)
T ss_pred             eecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEecccccc
Confidence                       0011111                   123344444334555555555555556666552          


Q ss_pred             --------CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         130 --------GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       130 --------~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                              +-.++.+. .+.|.+||.++..+......-|-..++.++|++||..|+..+.||.+.+-.++..+
T Consensus       304 ~~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  304 KFLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE  375 (434)
T ss_pred             ccccccccceEEEEee-cceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence                    11234443 46799999999888888767788899999999999999999999998887766544

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=2.3e-15  Score=112.06  Aligned_cols=160  Identities=18%  Similarity=0.158  Sum_probs=105.3

Q ss_pred             cceeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +.+.+.+|+|||+.|+..+.+   ..|.+||+.+++.. .+...  ........|+||++.++.+.+.++...+|.+.. 
T Consensus       196 ~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~-~l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~-  271 (427)
T PRK02889        196 EPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR-VVANF--KGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNA-  271 (427)
T ss_pred             CCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE-EeecC--CCCccceEECCCCCEEEEEEccCCCceEEEEEC-
Confidence            357789999999998877642   46999999877642 23222  344568899999999987666666544444321 


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEc--CCCceeeE
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLA--HQGHSRDI  155 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~--~~~~~~~~  155 (198)
                                                .  ......+..+........|+|||+.|+..+. ++...+|.+  ..+.....
T Consensus       272 --------------------------~--~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~l  323 (427)
T PRK02889        272 --------------------------D--GSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRV  323 (427)
T ss_pred             --------------------------C--CCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEE
Confidence                                      1  2233444444445567889999998876654 455566654  44544333


Q ss_pred             EeccCcccEEEEEEcCCCCEEEEecCCC---eEEEEecCCCcc
Q psy8758         156 YHTKRMQHVTHTVWSLDNKFVISASDEM---NLRVWKAHASEK  195 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~v~~w~~~~~~~  195 (198)
                      ...  ........|+|||++|+..+.++   .|.+||+.+++.
T Consensus       324 t~~--g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~  364 (427)
T PRK02889        324 TFT--GSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV  364 (427)
T ss_pred             ecC--CCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe
Confidence            212  23345678999999988766543   699999987754

>KOG1272|consensus

Probab=99.72  E-value=2e-17  Score=117.60  Aligned_cols=178  Identities=15%  Similarity=0.195  Sum_probs=139.2

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      |+.|.++.|-.+.+++|++- ..-++|||- .|..+.+++.   ..+|..+.|-|..-. +++++..|.+..-|+...+.
T Consensus       170 ~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtElHClk~---~~~v~rLeFLPyHfL-L~~~~~~G~L~Y~DVS~Gkl  243 (545)
T KOG1272|consen  170 METVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTELHCLKR---HIRVARLEFLPYHFL-LVAASEAGFLKYQDVSTGKL  243 (545)
T ss_pred             hhhhhhhhhhcchHHHHhhh-hceEEEecC-CCcEEeehhh---cCchhhhcccchhhe-eeecccCCceEEEeechhhh
Confidence            46788888988888888875 457999995 5666677765   467899999997544 45567899999999876542


Q ss_pred             ccc-------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 PLN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 ~~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      .-.             ...+.++-.|...|+|.+|.... ..++..+-.|.++|.++++.|+|++++|.+.|..++|||+
T Consensus       244 Va~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s-kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDl  322 (545)
T KOG1272|consen  244 VASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS-KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDL  322 (545)
T ss_pred             hHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCC-cchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeee
Confidence            211             11235788999999999999998 6888888889999999999999999999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      +....+..+...  .+...+++|..|- || .+....|.+|.
T Consensus       323 R~~~ql~t~~tp--~~a~~ls~Sqkgl-LA-~~~G~~v~iw~  360 (545)
T KOG1272|consen  323 RNFYQLHTYRTP--HPASNLSLSQKGL-LA-LSYGDHVQIWK  360 (545)
T ss_pred             ccccccceeecC--CCccccccccccc-ee-eecCCeeeeeh
Confidence            998777666553  4677888887663 33 34455788885

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=9.7e-15  Score=109.08  Aligned_cols=185  Identities=12%  Similarity=0.102  Sum_probs=120.3

Q ss_pred             cceeEEEECCCCceEEEeeC---CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISASD---EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~   76 (198)
                      +.+...+|+|||+.|+..+.   +..|.+||+.+++. ..+..  ....+....|+|+++.++.+.+.++.  |+++|+.
T Consensus       202 ~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~--~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~  278 (435)
T PRK05137        202 SLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGN--FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLR  278 (435)
T ss_pred             CCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeec--CCCcccCcEECCCCCEEEEEEecCCCceEEEEECC
Confidence            36788999999998887653   46899999987753 23332  24456788999999998776666655  7777876


Q ss_pred             CCCCc-cc------------cccCceEEEecCC--CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC--
Q psy8758          77 QLNSP-LN------------VHKDMTSAAANED--FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD--  139 (198)
Q Consensus        77 ~~~~~-~~------------~~~~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--  139 (198)
                      +.... +.            .....++++...+  ..|+++|+..  ...+.+..+...+....|+|||+.|+..+.+  
T Consensus       279 ~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g--~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~  356 (435)
T PRK05137        279 SGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG--SNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGG  356 (435)
T ss_pred             CCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC--CCeEEeecCCCcccCeEECCCCCEEEEEEcCCC
Confidence            43311 11            1111233333333  3677788764  3334444445556778999999999877643  


Q ss_pred             -CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC------CeEEEEecCCCc
Q psy8758         140 -KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE------MNLRVWKAHASE  194 (198)
Q Consensus       140 -~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~v~~w~~~~~~  194 (198)
                       ..|.+||+..+... .+..+  ..+..+.|+|||+.|+..+.+      ..++++|+..++
T Consensus       357 ~~~i~~~d~~~~~~~-~lt~~--~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~  415 (435)
T PRK05137        357 QFSIGVMKPDGSGER-ILTSG--FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN  415 (435)
T ss_pred             ceEEEEEECCCCceE-eccCC--CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc
Confidence             36888888665443 23222  346788999999988765432      357888886654

>KOG1538|consensus

Probab=99.71  E-value=2.2e-15  Score=112.12  Aligned_cols=183  Identities=13%  Similarity=0.156  Sum_probs=130.2

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .|+.++|-|||..++.+..+ .+.+||.++|..+++++.|  ...|.+++|+.+|+.+++ |+.|..+.+|+.+-...  
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgH--KDtVycVAys~dGkrFAS-G~aDK~VI~W~~klEG~Lk   89 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGH--KDTVYCVAYAKDGKRFAS-GSADKSVIIWTSKLEGILK   89 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccc--cceEEEEEEccCCceecc-CCCceeEEEecccccceee
Confidence            47899999999988777544 7999999999988888875  777999999999998765 67999999998642110  


Q ss_pred             --------c--ccc--------------------------------------ccCceEEEecCCCcEEEEEccCC-----
Q psy8758          81 --------P--LNV--------------------------------------HKDMTSAAANEDFNLYSYDIRQL-----  107 (198)
Q Consensus        81 --------~--~~~--------------------------------------~~~~~~~~~~~~~~i~~~d~~~~-----  107 (198)
                              .  +++                                      ..+.+++.|-.+|+|.+-+-...     
T Consensus        90 YSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I  169 (1081)
T KOG1538|consen   90 YSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKI  169 (1081)
T ss_pred             eccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEE
Confidence                    0  000                                      01234666666666655432110     


Q ss_pred             ------Cccee------------------------------------eecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758         108 ------NSPLN------------------------------------VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus       108 ------~~~~~------------------------------------~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                            ..++.                                    .-..-.-...|+++.|+|.++..|+.|+.+.+|
T Consensus       170 ~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~f  249 (1081)
T KOG1538|consen  170 ERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLF  249 (1081)
T ss_pred             eCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEE
Confidence                  00100                                    001111235678888999999999999999998


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      - +.|..+.+. .....+|+.++..|++++++.|+.||+|.-|++-
T Consensus       250 T-R~GvrLGTv-g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  250 T-RDGVRLGTV-GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             e-ecCeEEeec-cccceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            6 445555544 2345799999999999999999999999998874

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=1.4e-14  Score=108.14  Aligned_cols=183  Identities=13%  Similarity=0.093  Sum_probs=117.3

Q ss_pred             ceeEEEECCCCceEEEeeC---CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASD---EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~   77 (198)
                      .+.+.+|+|||+.|+..+.   ...|.+||+.+++. ..+...  ......+.|+|+++.++.+.+.++  .|++||+.+
T Consensus       205 ~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~-~~l~~~--~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~  281 (433)
T PRK04922        205 PILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQR-ELVASF--RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS  281 (433)
T ss_pred             ccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCE-EEeccC--CCCccCceECCCCCEEEEEEeCCCCceEEEEECCC
Confidence            4678899999999888763   34699999987753 223222  333457899999998876655555  599999865


Q ss_pred             CCCc-cc----------cc-cCc-eEEEecCCCc--EEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC--
Q psy8758          78 LNSP-LN----------VH-KDM-TSAAANEDFN--LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--  140 (198)
Q Consensus        78 ~~~~-~~----------~~-~~~-~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--  140 (198)
                      .... +.          .. .+. ++++...++.  |+.+|+.. ++ ...+..........+|+|||++++..+.++  
T Consensus       282 g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~-g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~  359 (433)
T PRK04922        282 RQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG-GS-AERLTFQGNYNARASVSPDGKKIAMVHGSGGQ  359 (433)
T ss_pred             CCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC-CC-eEEeecCCCCccCEEECCCCCEEEEEECCCCc
Confidence            4311 11          11 122 3333334444  66666654 22 333332333445789999999988765433  


Q ss_pred             -cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCC
Q psy8758         141 -SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHAS  193 (198)
Q Consensus       141 -~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~  193 (198)
                       .|.+||+.+++..... .+  .....+.|+|||++++..+.+   +.++++++..+
T Consensus       360 ~~I~v~d~~~g~~~~Lt-~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~  413 (433)
T PRK04922        360 YRIAVMDLSTGSVRTLT-PG--SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR  413 (433)
T ss_pred             eeEEEEECCCCCeEECC-CC--CCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence             6999999888765332 22  244567999999988766543   46888888543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.70  E-value=3e-14  Score=105.08  Aligned_cols=190  Identities=20%  Similarity=0.352  Sum_probs=141.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-eeeeeeeeeecCceeeEEe-CCCCC-eEEEEecCCccEEEEeccC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KLGPIRKVVMSLRSNMVSW-NPMEA-FVFTAANEDFNLYSYDIRQ-   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~-~~~~~-~~~~~~~~d~~i~~~d~~~-   77 (198)
                      ..+..+.+.+.+..++.++.|+.+.+|+...+. ....+.... ...+..+.+ ++++. .+...+..++.+.+|+... 
T Consensus        66 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  144 (466)
T COG2319          66 DSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLH-DSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTP  144 (466)
T ss_pred             ceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccC-CCceeeEEEECCCcceEEeccCCCCccEEEEEecCC
Confidence            457889999999999999999999999998765 333333321 125666666 88887 4444344489999999875 


Q ss_pred             CC--Cccccc----------cC-ceEEEecC-CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcE
Q psy8758          78 LN--SPLNVH----------KD-MTSAAANE-DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSL  142 (198)
Q Consensus        78 ~~--~~~~~~----------~~-~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v  142 (198)
                      ..  ..+..|          +. ..+++++. ++.+++|++.. ...+..+..|...+.+++|+|+++ .+++++.|+.+
T Consensus       145 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i  223 (466)
T COG2319         145 GKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT-GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTI  223 (466)
T ss_pred             CeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC-CceEEeeccCCCceEEEEEcCCcceEEEEecCCCcE
Confidence            21  112222          22 25666665 99999999997 677788888999999999999998 55555899999


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ++||...+.........|.... -..|+|++.++++++.|+.+++|++....
T Consensus       224 ~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  274 (466)
T COG2319         224 RLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSS  274 (466)
T ss_pred             EEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCC
Confidence            9999887777663335665554 33899999888899999999999998655

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.69  E-value=3.9e-15  Score=99.02  Aligned_cols=116  Identities=19%  Similarity=0.343  Sum_probs=83.1

Q ss_pred             cceeEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC--CccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE--DFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~~   77 (198)
                      ++|.+++|+|+|+.+++.  ..++.+.+||++ ++.+..+    ....++.+.|+|+|++++++|..  .|.+.+||.++
T Consensus        60 ~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~----~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   60 GPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSF----GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             CceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEee----cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            469999999999987654  456799999995 3333333    24567889999999999987622  35566666653


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec------CCcEEEEEcCCCc
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY------DKSLRLYLAHQGH  151 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------d~~v~v~d~~~~~  151 (198)
                                                    .+.+...+  ...++.++|+|||++++++..      |+.++||+.. |+
T Consensus       135 ------------------------------~~~i~~~~--~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~  181 (194)
T PF08662_consen  135 ------------------------------KKKISTFE--HSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GR  181 (194)
T ss_pred             ------------------------------CEEeeccc--cCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-Ce
Confidence                                          34444443  234789999999999998864      7889999985 54


Q ss_pred             eeeE
Q psy8758         152 SRDI  155 (198)
Q Consensus       152 ~~~~  155 (198)
                      .+..
T Consensus       182 ~l~~  185 (194)
T PF08662_consen  182 LLYK  185 (194)
T ss_pred             EeEe
Confidence            4443

>KOG2445|consensus

Probab=99.68  E-value=4.5e-15  Score=100.81  Aligned_cols=147  Identities=18%  Similarity=0.223  Sum_probs=109.0

Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc------cccc-------------cCceEEEecCCCcEEEEEc
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP------LNVH-------------KDMTSAAANEDFNLYSYDI  104 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~------~~~~-------------~~~~~~~~~~~~~i~~~d~  104 (198)
                      |..-|.++.|.+.|++++++ +.|+++++||.+.....      .+.|             .+.++++++.|+++.+|.-
T Consensus        12 h~DlihdVs~D~~GRRmAtC-SsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   12 HKDLIHDVSFDFYGRRMATC-SSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CcceeeeeeecccCceeeec-cCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            45668899999999999874 79999999997644322      2223             3467999999999999986


Q ss_pred             cCCC--------cceeeecCCCcceEEEEEccC--CCEEEEeecCCcEEEEEcCCCc-----------------------
Q psy8758         105 RQLN--------SPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGH-----------------------  151 (198)
Q Consensus       105 ~~~~--------~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~d~~v~v~d~~~~~-----------------------  151 (198)
                      ....        ....++......++++.|.|.  |-.||+++.||.+|||+.....                       
T Consensus        91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~  170 (361)
T KOG2445|consen   91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQ  170 (361)
T ss_pred             cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccC
Confidence            3211        123445566788999999996  6689999999999999765100                       


Q ss_pred             -------------------------------eeeEE------------eccCcccEEEEEEcCC-C---CEEEEecCCCe
Q psy8758         152 -------------------------------SRDIY------------HTKRMQHVTHTVWSLD-N---KFVISASDEMN  184 (198)
Q Consensus       152 -------------------------------~~~~~------------~~~~~~~v~~~~~s~~-~---~~l~~~~~dg~  184 (198)
                                                     .+..+            ..+|..+|++++|.|+ |   ..||+++.|| 
T Consensus       171 ~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-  249 (361)
T KOG2445|consen  171 PCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-  249 (361)
T ss_pred             cceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-
Confidence                                           00000            1256789999999996 3   3789999999 


Q ss_pred             EEEEecCC
Q psy8758         185 LRVWKAHA  192 (198)
Q Consensus       185 v~~w~~~~  192 (198)
                      |+||++..
T Consensus       250 v~I~~v~~  257 (361)
T KOG2445|consen  250 VRIFKVKV  257 (361)
T ss_pred             EEEEEEee
Confidence            99999974

>KOG1587|consensus

Probab=99.68  E-value=6.9e-15  Score=110.36  Aligned_cols=190  Identities=17%  Similarity=0.218  Sum_probs=136.8

Q ss_pred             cceeEEEECCCC--ceEEEeeCCCeEEEEEccCCceeeee-----ee-----eeecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758           2 QHVTHTVWSLDN--KFVISASDEMNLRVWKAHASEKLGPI-----RK-----VVMSLRSNMVSWNPMEAFVFTAANEDFN   69 (198)
Q Consensus         2 ~~v~~~~~s~~~--~~l~~~~~d~~i~i~~~~~~~~~~~~-----~~-----~~~~~~v~~~~~~~~~~~~~~~~~~d~~   69 (198)
                      .+|..+.|-.+.  .-+++++.||.|..|+++.-..+...     ..     ......+++++|.|.....|..|++.|.
T Consensus       292 ~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~  371 (555)
T KOG1587|consen  292 EPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGK  371 (555)
T ss_pred             cCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcE
Confidence            467888886644  45999999999999988643221111     01     1123457899999998888888999999


Q ss_pred             EEEEeccCCCC----ccccc------cC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEc
Q psy8758          70 LYSYDIRQLNS----PLNVH------KD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        70 i~~~d~~~~~~----~~~~~------~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~s  127 (198)
                      |.--+-.....    .+++|      .+            ..+.+++ |.++++|.......|+..+..+...+++++||
T Consensus       372 v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWS  450 (555)
T KOG1587|consen  372 VYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWS  450 (555)
T ss_pred             EEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEc
Confidence            88743322111    11222      22            2344555 99999999884378888888888889999999


Q ss_pred             cCCC-EEEEeecCCcEEEEEcCCCceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         128 PTGR-EFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       128 p~~~-~l~~~~~d~~v~v~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |... .++++..||.+.+||+.......... .-+......+.|+++|+.|+.|...|.+++|++..
T Consensus       451 ptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  451 PTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             CcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            9754 77888889999999998755433321 12245677888999999999999999999999953

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.68  E-value=2.2e-14  Score=104.26  Aligned_cols=188  Identities=13%  Similarity=0.087  Sum_probs=117.4

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc---
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL---   82 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~---   82 (198)
                      .+.|+|||+++++.+.||.|.++|+.+.+....+..   .....++++++||++++++....+.+.++|.++.+...   
T Consensus        41 ~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~---G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~  117 (369)
T PF02239_consen   41 GLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV---GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIP  117 (369)
T ss_dssp             EEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE----SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred             EEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec---CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecc
Confidence            467999999999999999999999999987777655   45568899999999999887789999999987543110   


Q ss_pred             -----------------ccccC---------------------------------------------ceEEEecCCCcEE
Q psy8758          83 -----------------NVHKD---------------------------------------------MTSAAANEDFNLY  100 (198)
Q Consensus        83 -----------------~~~~~---------------------------------------------~~~~~~~~~~~i~  100 (198)
                                       ..+..                                             .++++...+..+-
T Consensus       118 ~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~  197 (369)
T PF02239_consen  118 TGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIA  197 (369)
T ss_dssp             --EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEE
T ss_pred             cccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeE
Confidence                             00000                                             1123333334444


Q ss_pred             EEEccCC------------------------------------------------------CcceeeecCCCcceEEEEE
Q psy8758         101 SYDIRQL------------------------------------------------------NSPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus       101 ~~d~~~~------------------------------------------------------~~~~~~~~~~~~~i~~~~~  126 (198)
                      ++|.++.                                                      .+.++.++....+ ..+..
T Consensus       198 viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~t  276 (369)
T PF02239_consen  198 VIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKT  276 (369)
T ss_dssp             EEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE-
T ss_pred             EEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeec
Confidence            4444331                                                      1122222222223 56788


Q ss_pred             ccCCCEEEEe----ecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec--CCCeEEEEecCCCcccc
Q psy8758         127 SPTGREFVAG----GYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS--DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       127 sp~~~~l~~~----~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~v~~w~~~~~~~~~  197 (198)
                      +|+++++.+.    ...++|.++|.++.+....+..+....+..+.|+++|+.+..+.  .++.|.+||..|.++++
T Consensus       277 hP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~  353 (369)
T PF02239_consen  277 HPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKK  353 (369)
T ss_dssp             -TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred             CCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEE
Confidence            9999999887    34579999999998776665333334599999999999766543  33479999999988764

...

>KOG1240|consensus

Probab=99.67  E-value=2.1e-14  Score=112.88  Aligned_cols=191  Identities=15%  Similarity=0.114  Sum_probs=140.9

Q ss_pred             ceeEEEECC-CCceEEEeeCCCeEEEEEccCCc----eeee-eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASE----KLGP-IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~----~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .|..++.++ ++.++++|+.||+|++|++..-.    ..+. ........++..+.+.+.+..++++ +.||.|.+.++.
T Consensus      1050 ~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~-t~DG~v~~~~id 1128 (1431)
T KOG1240|consen 1050 AVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS-TKDGSVRVLRID 1128 (1431)
T ss_pred             cccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE-cCCCeEEEEEcc
Confidence            355666666 45899999999999999986321    1121 2222246778899999999988875 799999999987


Q ss_pred             CCCCc-----------------------cccccC-ceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCC
Q psy8758          77 QLNSP-----------------------LNVHKD-MTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTG  130 (198)
Q Consensus        77 ~~~~~-----------------------~~~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~  130 (198)
                      .....                       +..+.. ..++.++..+.+..||++. ...+..+  ....+.|++++.+|.+
T Consensus      1129 ~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~-~~~~w~lk~~~~hG~vTSi~idp~~ 1207 (1431)
T KOG1240|consen 1129 HYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRM-RHDAWRLKNQLRHGLVTSIVIDPWC 1207 (1431)
T ss_pred             ccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchh-hhhHHhhhcCccccceeEEEecCCc
Confidence            52210                       111112 3678888999999999987 3333333  3345789999999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC---CCEEEE-ec-CCCeEEEEecCCCcc
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD---NKFVIS-AS-DEMNLRVWKAHASEK  195 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~-~~-~dg~v~~w~~~~~~~  195 (198)
                      .+++.|+..|.+.+||++-+.++.....++..++..+..+|-   ....++ ++ ..+.|.+|++.+|.+
T Consensus      1208 ~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1208 NWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred             eEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc
Confidence            999999999999999999999988887777788988888773   234444 33 578899999998843

>KOG1188|consensus

Probab=99.67  E-value=2e-15  Score=103.72  Aligned_cols=134  Identities=12%  Similarity=0.113  Sum_probs=101.2

Q ss_pred             EEEEecCCccEEEEeccCCC--Cccccc-------------cCceEEEecCCCcEEEEEccCCCcc-eeeecCCC-cceE
Q psy8758          60 VFTAANEDFNLYSYDIRQLN--SPLNVH-------------KDMTSAAANEDFNLYSYDIRQLNSP-LNVHKDMT-SAVT  122 (198)
Q Consensus        60 ~~~~~~~d~~i~~~d~~~~~--~~~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~-~~i~  122 (198)
                      .++++-..|.|++||..+..  ..++++             ....+.+|+.||+|++||+|...+. ....+.++ .+..
T Consensus        42 ~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~  121 (376)
T KOG1188|consen   42 AVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFI  121 (376)
T ss_pred             eEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcce
Confidence            34445678999999988733  233332             2345889999999999999974332 33344444 4567


Q ss_pred             EEEEccCCCEEEEeec----CCcEEEEEcCCCce-eeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCC
Q psy8758         123 SVDYSPTGREFVAGGY----DKSLRLYLAHQGHS-RDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       123 ~~~~sp~~~~l~~~~~----d~~v~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +++.+-.++.+++|..    +..|.+||.+..+. +..+...|...|+++.|+| +.++|++|+.||.|.+||++..
T Consensus       122 ~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d  198 (376)
T KOG1188|consen  122 CLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD  198 (376)
T ss_pred             EeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence            7777767888888764    67899999999776 6666788999999999999 4679999999999999998743

>KOG0644|consensus

Probab=99.67  E-value=8.7e-17  Score=121.67  Aligned_cols=192  Identities=17%  Similarity=0.230  Sum_probs=136.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      .+|+|+.|...|.++++|++|..++||..+++.++...+.  |.+.++.++.+.++..+++ ++.|..|++|.++...  
T Consensus       191 naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rG--hs~ditdlavs~~n~~iaa-aS~D~vIrvWrl~~~~pv  267 (1113)
T KOG0644|consen  191 NAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRG--HSGDITDLAVSSNNTMIAA-ASNDKVIRVWRLPDGAPV  267 (1113)
T ss_pred             hheeeeeeccccceEeecCccceeeeeeccchhhhccCCC--Cccccchhccchhhhhhhh-cccCceEEEEecCCCchH
Confidence            3689999999999999999999999999999888777766  4788999999877666654 6899999999998654  


Q ss_pred             CccccccCce-------EEEecCCCcEEEEEccCCCcceeeec----CCCcceEEEEEccCCCE----------------
Q psy8758          80 SPLNVHKDMT-------SAAANEDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGRE----------------  132 (198)
Q Consensus        80 ~~~~~~~~~~-------~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~sp~~~~----------------  132 (198)
                      ..+.+|.+.+       ..+.+.||++++||.+- ...+..-.    ....-+.++.|...+.-                
T Consensus       268 svLrghtgavtaiafsP~~sss~dgt~~~wd~r~-~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~  346 (1113)
T KOG0644|consen  268 SVLRGHTGAVTAIAFSPRASSSDDGTCRIWDARL-EPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFE  346 (1113)
T ss_pred             HHHhccccceeeeccCccccCCCCCceEeccccc-cccccCCCCCCcccccceeeeeccccccccccccCCcccccchhh
Confidence            4566777654       23568899999999982 11111100    01112222222222222                


Q ss_pred             ----------EEEee-----------cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEec
Q psy8758         133 ----------FVAGG-----------YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKA  190 (198)
Q Consensus       133 ----------l~~~~-----------~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~  190 (198)
                                +++.+           .+-.+++|++-++...... .+|...+..+.++|-+ +...+++.||...|||+
T Consensus       347 ~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l-~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi  425 (1113)
T KOG0644|consen  347 QLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNL-MGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDI  425 (1113)
T ss_pred             HhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhh-cccccceeeeeecCCCcHhhhhccCCCceEeeec
Confidence                      22222           2345677777777766655 6788899999999954 55668899999999999


Q ss_pred             CCCccccC
Q psy8758         191 HASEKLEH  198 (198)
Q Consensus       191 ~~~~~~~~  198 (198)
                      -.|-+++|
T Consensus       426 ~eg~pik~  433 (1113)
T KOG0644|consen  426 WEGIPIKH  433 (1113)
T ss_pred             ccCCccee
Confidence            88877654

>KOG1523|consensus

Probab=99.67  E-value=4.7e-15  Score=101.15  Aligned_cols=165  Identities=18%  Similarity=0.227  Sum_probs=123.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEc-cCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKA-HASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.|++++|+|..+.|++++.|..-++|.. ..++-...+....++...+++.|+|.++.+++ |+....|.+|-.++...
T Consensus        56 ~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAV-gSgar~isVcy~E~ENd  134 (361)
T KOG1523|consen   56 KIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAV-GSGARLISVCYYEQEND  134 (361)
T ss_pred             cceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEe-ccCccEEEEEEEecccc
Confidence            46899999999999999999999999998 44444444444556888999999999887765 66777777776654210


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC-----C------
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-----Q------  149 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~-----~------  149 (198)
                                           |=     -....-+.+.+.|++++|+|++-+|++|+.|+..++|..-     +      
T Consensus       135 ---------------------WW-----VsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~p  188 (361)
T KOG1523|consen  135 ---------------------WW-----VSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTP  188 (361)
T ss_pred             ---------------------ee-----hhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCC
Confidence                                 00     0111223456789999999999999999999999999642     1      


Q ss_pred             -------CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         150 -------GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       150 -------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                             |+++..+ ....+.+..+.|+|+|..|+-.+.|+.+.+=|.....
T Consensus       189 Wgsk~PFG~lm~E~-~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  189 WGSKMPFGQLMSEA-SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS  239 (361)
T ss_pred             CccCCcHHHHHHhh-ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence                   1222222 1345789999999999999999999999998876553

>KOG1517|consensus

Probab=99.65  E-value=7.2e-15  Score=114.04  Aligned_cols=187  Identities=15%  Similarity=0.210  Sum_probs=129.9

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-----c
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-----P   81 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-----~   81 (198)
                      ++|..+..+|+++++-..|+|||.+.......+... .+..++++.-+-....++++|..||.+++||.+....     .
T Consensus      1171 ~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~-s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~ 1249 (1387)
T KOG1517|consen 1171 VDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYG-SSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCV 1249 (1387)
T ss_pred             eehhhhCCeEEecCCeeEEEEEecccceeEeecccC-CCccceeecccccCCceEEEeecCCceEEeecccCCcccccee
Confidence            467665556666666789999999766554444332 3344566655444445556688999999999875332     1


Q ss_pred             cccccC--------------ceEEEecCCCcEEEEEccCC-CcceeeecCC---CcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          82 LNVHKD--------------MTSAAANEDFNLYSYDIRQL-NSPLNVHKDM---TSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        82 ~~~~~~--------------~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~---~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      ...|..              ..+++++.+|.|++||++.. ......+..|   .+..+++..+++...+|+|+. +.|+
T Consensus      1250 ~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ik 1328 (1387)
T KOG1517|consen 1250 YREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIK 1328 (1387)
T ss_pred             ecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEE
Confidence            222222              24899999999999999973 2222222222   235899999999999999998 9999


Q ss_pred             EEEcCCCceeeEE-----eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         144 LYLAHQGHSRDIY-----HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       144 v~d~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ||++...+.....     .....+.+.+++|+|-.-.+|+|+.|..|.||.....+.
T Consensus      1329 Iy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~~ 1385 (1387)
T KOG1517|consen 1329 IYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPRL 1385 (1387)
T ss_pred             EEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcCC
Confidence            9999764432221     122235679999999998999999999999998876543

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.65  E-value=7.2e-14  Score=104.09  Aligned_cols=156  Identities=16%  Similarity=0.198  Sum_probs=106.2

Q ss_pred             ceeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~   77 (198)
                      .+...+|+|+|++|+....+   ..|++||+.+++.. .+..  ....+..++|+|+++.++.+.+.++  .|++||+.+
T Consensus       191 ~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~-~~~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~  267 (417)
T TIGR02800       191 PILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE-KVAS--FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDG  267 (417)
T ss_pred             ceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE-Eeec--CCCCccceEECCCCCEEEEEECCCCCccEEEEECCC
Confidence            46778999999999877643   47999999877532 2222  2344567899999998887654443  355555443


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CC--cEEEEEcCCCceee
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DK--SLRLYLAHQGHSRD  154 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~--~v~v~d~~~~~~~~  154 (198)
                                                     .....+..+........|+|||+.|+..+. .+  .|+++|+.+++...
T Consensus       268 -------------------------------~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~  316 (417)
T TIGR02800       268 -------------------------------KQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR  316 (417)
T ss_pred             -------------------------------CCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE
Confidence                                           223333334444456789999998876654 33  58888888776544


Q ss_pred             EEeccCcccEEEEEEcCCCCEEEEecCCC---eEEEEecCCCc
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFVISASDEM---NLRVWKAHASE  194 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~v~~w~~~~~~  194 (198)
                      ..  .+......+.|+|+|++++..+.++   .|.+||+.++.
T Consensus       317 l~--~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~  357 (417)
T TIGR02800       317 LT--FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG  357 (417)
T ss_pred             ee--cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence            33  2335677889999999988877665   78999987754

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG2139|consensus

Probab=99.65  E-value=1.4e-14  Score=100.48  Aligned_cols=167  Identities=13%  Similarity=0.272  Sum_probs=120.6

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      +..++|++.-..++++..|-.|++|+-.+ +.+..++.. ....|.+++|-|.+...++.|. .+-|++|.......   
T Consensus       101 lr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~-sQrnvtclawRPlsaselavgC-r~gIciW~~s~tln---  174 (445)
T KOG2139|consen  101 LRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSV-SQRNVTCLAWRPLSASELAVGC-RAGICIWSDSRTLN---  174 (445)
T ss_pred             eeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecch-hhcceeEEEeccCCcceeeeee-cceeEEEEcCcccc---
Confidence            56789999777788899999999999765 444445443 3456899999998776666653 45688887653211   


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCCCceeeEEeccCcc
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                                 ....++  -+.+....+...++| .+|++|+|.+||..+++++. |..|.|||..++...... ....+
T Consensus       175 -----------~~r~~~--~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~-~~glg  239 (445)
T KOG2139|consen  175 -----------ANRNIR--MMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI-PKGLG  239 (445)
T ss_pred             -----------cccccc--cccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc-ccCCC
Confidence                       000011  001101223334444 68999999999999999886 678999999999887766 33447


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .+.-+.|||||.+|.++.-|+..++|+..
T Consensus       240 g~slLkwSPdgd~lfaAt~davfrlw~e~  268 (445)
T KOG2139|consen  240 GFSLLKWSPDGDVLFAATCDAVFRLWQEN  268 (445)
T ss_pred             ceeeEEEcCCCCEEEEecccceeeeehhc
Confidence            88899999999999999999999999654

>KOG2321|consensus

Probab=99.64  E-value=1.6e-14  Score=105.52  Aligned_cols=156  Identities=14%  Similarity=0.182  Sum_probs=125.6

Q ss_pred             eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccC--------------------------------
Q psy8758          40 RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKD--------------------------------   87 (198)
Q Consensus        40 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~--------------------------------   87 (198)
                      +.+.++...+.+..+|||++++++|..--.|++||+.+..-.+..|.+                                
T Consensus        46 Qdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G  125 (703)
T KOG2321|consen   46 QDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG  125 (703)
T ss_pred             HhcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcC
Confidence            444566667899999999999999988999999999865543333321                                


Q ss_pred             --------------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          88 --------------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        88 --------------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                                          .-+..++....|+-+++++ +..+..+......++++..++-..+|++|+.+|.|..||.
T Consensus       126 ~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEq-GrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDp  204 (703)
T KOG2321|consen  126 RHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQ-GRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDP  204 (703)
T ss_pred             eeeeeecCcCCccccccCCCccEEEeecCcceEEEEccc-cccccccccccccceeeeecCccceEEecccCceEEEecc
Confidence                                0166667777788889998 7888888777789999999999999999999999999999


Q ss_pred             CCCceeeEEec-----cCc-----ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHT-----KRM-----QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~-----~~~-----~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.......+..     .|.     ..|+++.|+.+|-.+++|..+|.+.|||+++.+++
T Consensus       205 R~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl  263 (703)
T KOG2321|consen  205 RDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPL  263 (703)
T ss_pred             hhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCce
Confidence            98766555421     122     24999999999999999999999999999988765

>KOG2110|consensus

Probab=99.64  E-value=9.8e-14  Score=96.41  Aligned_cols=185  Identities=12%  Similarity=0.175  Sum_probs=128.4

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC-CccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE-DFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-d~~i~~~d~~~~~~~   81 (198)
                      .++.+.|+.+...|..|+.|| .++|..+.-..  ..........|...-|+.  ..++.++-. ...+++++.+.....
T Consensus         7 ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k--~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~I   81 (391)
T KOG2110|consen    7 TINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEK--CFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTTI   81 (391)
T ss_pred             ceeeeeeccceeEEEccCCCc-eeEEecCchHH--hhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCceE
Confidence            467788999999999999997 67888764432  121111233445555653  445444322 245788887754432


Q ss_pred             cc-----------cccCceEEEecCCCcEEEEEccCCCcceeeecC---CCcceEEEEEccCCCEEEEee--cCCcEEEE
Q psy8758          82 LN-----------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGG--YDKSLRLY  145 (198)
Q Consensus        82 ~~-----------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~  145 (198)
                      -+           -+.+ .++++-++. |++||+++ -+.+.++..   +...+.++++++.+.+++.-+  ..|.|.+|
T Consensus        82 Ce~~fpt~IL~VrmNr~-RLvV~Lee~-IyIydI~~-MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~  158 (391)
T KOG2110|consen   82 CEIFFPTSILAVRMNRK-RLVVCLEES-IYIYDIKD-MKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLF  158 (391)
T ss_pred             EEEecCCceEEEEEccc-eEEEEEccc-EEEEeccc-ceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEE
Confidence            11           1222 244444444 99999998 577776643   444565666666667888643  36899999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCe-EEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN-LRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-v~~w~~~~~~~~  196 (198)
                      |+.+-+....+ ..|.+.+.+++|+++|.+|||+++.|+ |+|+.+.+|+++
T Consensus       159 d~~nl~~v~~I-~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl  209 (391)
T KOG2110|consen  159 DTINLQPVNTI-NAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKL  209 (391)
T ss_pred             EcccceeeeEE-EecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEe
Confidence            99999998888 599999999999999999999999987 699999999876

>KOG1517|consensus

Probab=99.63  E-value=9.2e-14  Score=108.08  Aligned_cols=188  Identities=14%  Similarity=0.126  Sum_probs=134.5

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCC--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      -..+.|+|-...++++...-.|++||.+.++.+..+.... ....|+.+.+-. +...++.+++.||.|++|+--...  
T Consensus      1067 pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~ 1146 (1387)
T KOG1517|consen 1067 PKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWK 1146 (1387)
T ss_pred             CceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccC
Confidence            4567889988889988867789999999887765554322 344577777644 334444556789999998642211  


Q ss_pred             -Cc------------------------------------------cc------------------------cccCceEEE
Q psy8758          80 -SP------------------------------------------LN------------------------VHKDMTSAA   92 (198)
Q Consensus        80 -~~------------------------------------------~~------------------------~~~~~~~~~   92 (198)
                       ..                                          +.                        .+.+.++++
T Consensus      1147 ~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~A 1226 (1387)
T KOG1517|consen 1147 KPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAA 1226 (1387)
T ss_pred             CceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEE
Confidence             00                                          00                        001245899


Q ss_pred             ecCCCcEEEEEccCCC--cceeeecCCCcc--eEEEEEccCCC-EEEEeecCCcEEEEEcCCCceeeEE-eccC---ccc
Q psy8758          93 ANEDFNLYSYDIRQLN--SPLNVHKDMTSA--VTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIY-HTKR---MQH  163 (198)
Q Consensus        93 ~~~~~~i~~~d~~~~~--~~~~~~~~~~~~--i~~~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~---~~~  163 (198)
                      |..||.+++||.+...  ..+...+.|...  |..+.+.+.|- .|++|+.||.|++||++........ ...|   ++.
T Consensus      1227 GfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~ 1306 (1387)
T KOG1517|consen 1227 GFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSA 1306 (1387)
T ss_pred             eecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCcc
Confidence            9999999999998643  356677778777  99999988765 5999999999999999984221111 1122   235


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ++++..+++...+|+|+. +.|+||++..
T Consensus      1307 lTal~VH~hapiiAsGs~-q~ikIy~~~G 1334 (1387)
T KOG1517|consen 1307 LTALTVHEHAPIIASGSA-QLIKIYSLSG 1334 (1387)
T ss_pred             ceeeeeccCCCeeeecCc-ceEEEEecCh
Confidence            999999999999999988 9999999854

>KOG0322|consensus

Probab=99.62  E-value=9.1e-15  Score=97.46  Aligned_cols=144  Identities=16%  Similarity=0.191  Sum_probs=107.3

Q ss_pred             cceeEEEECC-CCc--eEEEeeCCCeEEEEEccCCceeeee--------eeeeecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           2 QHVTHTVWSL-DNK--FVISASDEMNLRVWKAHASEKLGPI--------RKVVMSLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         2 ~~v~~~~~s~-~~~--~l~~~~~d~~i~i~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      +.+.|..+.- +++  ++++|-++|.+.+||+.++...-.+        ....|..+|.++.+.+....=+. |+.+..+
T Consensus       151 gsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGis-gga~dkl  229 (323)
T KOG0322|consen  151 GSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGIS-GGADDKL  229 (323)
T ss_pred             CceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcC-CCccccc
Confidence            4566766543 333  5567778999999999887322111        11236788999999875444333 4567778


Q ss_pred             EEEeccCCCCcc-----------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEE
Q psy8758          71 YSYDIRQLNSPL-----------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF  133 (198)
Q Consensus        71 ~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l  133 (198)
                      ..|.+......+                 -...+.++++++.|+.|++|..++ ..++..++.|...+++++|+|+...+
T Consensus       230 ~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrt-l~pLAVLkyHsagvn~vAfspd~~lm  308 (323)
T KOG0322|consen  230 VMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRT-LNPLAVLKYHSAGVNAVAFSPDCELM  308 (323)
T ss_pred             eeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEecc-CCchhhhhhhhcceeEEEeCCCCchh
Confidence            888775332111                 012346799999999999999999 79999999999999999999999999


Q ss_pred             EEeecCCcEEEEEc
Q psy8758         134 VAGGYDKSLRLYLA  147 (198)
Q Consensus       134 ~~~~~d~~v~v~d~  147 (198)
                      |.++.|+.|.+|++
T Consensus       309 AaaskD~rISLWkL  322 (323)
T KOG0322|consen  309 AAASKDARISLWKL  322 (323)
T ss_pred             hhccCCceEEeeec
Confidence            99999999999986

>KOG0644|consensus

Probab=99.62  E-value=2.8e-15  Score=113.69  Aligned_cols=184  Identities=17%  Similarity=0.242  Sum_probs=142.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|+.++.+.+..++++++.|..|++|.+.++..+..++.  |++.|++++|+|-.     +.+.||++++||.+-....
T Consensus       233 ~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrg--htgavtaiafsP~~-----sss~dgt~~~wd~r~~~~~  305 (1113)
T KOG0644|consen  233 GDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRG--HTGAVTAIAFSPRA-----SSSDDGTCRIWDARLEPRI  305 (1113)
T ss_pred             cccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhc--cccceeeeccCccc-----cCCCCCceEeccccccccc
Confidence            4578888888888999999999999999999987777776  58899999999964     3468999999998711110


Q ss_pred             cc-----cc-------------------------------------cC-ceEEE-----------ecCCCcEEEEEccCC
Q psy8758          82 LN-----VH-------------------------------------KD-MTSAA-----------ANEDFNLYSYDIRQL  107 (198)
Q Consensus        82 ~~-----~~-------------------------------------~~-~~~~~-----------~~~~~~i~~~d~~~~  107 (198)
                      +.     ..                                     .. ..+++           .-.+..+.+|++.+ 
T Consensus       306 y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~-  384 (1113)
T KOG0644|consen  306 YVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYT-  384 (1113)
T ss_pred             cCCCCCCcccccceeeeeccccccccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeeccc-
Confidence            00     00                                     00 01222           22344567888887 


Q ss_pred             CcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEE
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLR  186 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~  186 (198)
                      +..+..+.+|...+..+.++|-+. ...+++.||...|||+-.|.++..+..+| ..+..-+||+||..++....-|.++
T Consensus       385 g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~  463 (1113)
T KOG0644|consen  385 GQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLY  463 (1113)
T ss_pred             chhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeeccc-ceeeccccCCCCceEecCCCCCceE
Confidence            677888889999999999999655 55688999999999999999988877776 5666779999999998877778898


Q ss_pred             EEecCCCc
Q psy8758         187 VWKAHASE  194 (198)
Q Consensus       187 ~w~~~~~~  194 (198)
                      |.....++
T Consensus       464 i~g~gqs~  471 (1113)
T KOG0644|consen  464 ILGTGQSK  471 (1113)
T ss_pred             EeccCCCc
Confidence            88766554

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.62  E-value=9.7e-14  Score=103.49  Aligned_cols=164  Identities=14%  Similarity=0.088  Sum_probs=107.1

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC--ccEEEEeccCCCCc----ccc-------c-cC
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED--FNLYSYDIRQLNSP----LNV-------H-KD   87 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d--~~i~~~d~~~~~~~----~~~-------~-~~   87 (198)
                      +..|.+||.+... ...+..  +...+..+.|+|+++.++.++..+  ..|++||+.+....    +..       . .+
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~--~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG  259 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNR--SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDG  259 (429)
T ss_pred             eEEEEEECCCCCC-ceEecc--CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCC
Confidence            4689999986443 333332  356788999999999998865332  46999998754311    111       1 12


Q ss_pred             ceEE-EecCCCcEEEE--EccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEEEEcCCCc-eeeEEeccCcc
Q psy8758          88 MTSA-AANEDFNLYSY--DIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGH-SRDIYHTKRMQ  162 (198)
Q Consensus        88 ~~~~-~~~~~~~i~~~--d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~-~~~~~~~~~~~  162 (198)
                      ..++ +...++...+|  |+..  .....+..+...+...+|+|||+.|+..+ .++...+|+++... ....+  .+..
T Consensus       260 ~~La~~~~~~g~~~Iy~~d~~~--~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l--~~~~  335 (429)
T PRK01742        260 SRLAFASSKDGVLNIYVMGANG--GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV--GGRG  335 (429)
T ss_pred             CEEEEEEecCCcEEEEEEECCC--CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe--cCCC
Confidence            2343 44567765555  5543  44556666777788999999999877654 57888888775422 22222  2322


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                        ..+.|+|||++|+..+.++ +.+||+.+++.
T Consensus       336 --~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~  365 (429)
T PRK01742        336 --YSAQISADGKTLVMINGDN-VVKQDLTSGST  365 (429)
T ss_pred             --CCccCCCCCCEEEEEcCCC-EEEEECCCCCe
Confidence              4578999999998877655 56699988753

>KOG1963|consensus

Probab=99.61  E-value=1.5e-13  Score=104.48  Aligned_cols=183  Identities=17%  Similarity=0.184  Sum_probs=139.4

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCC--eEEEEecCCccEEEEeccCCCCc---
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEA--FVFTAANEDFNLYSYDIRQLNSP---   81 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~d~~i~~~d~~~~~~~---   81 (198)
                      ..||+|+++++.... ..|.||...++.+...+..  +..++..+.+.|...  ..+.+++.+|.|++||.......   
T Consensus        22 avfSnD~k~l~~~~~-~~V~VyS~~Tg~~i~~l~~--~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~   98 (792)
T KOG1963|consen   22 AVFSNDAKFLFLCTG-NFVKVYSTATGECITSLED--HTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTF   98 (792)
T ss_pred             cccccCCcEEEEeeC-CEEEEEecchHhhhhhccc--ccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEE
Confidence            458999998887654 5899999999988775554  577788899988765  33335679999999987532100   


Q ss_pred             ----------c------------------------------------------------ccc------------------
Q psy8758          82 ----------L------------------------------------------------NVH------------------   85 (198)
Q Consensus        82 ----------~------------------------------------------------~~~------------------   85 (198)
                                +                                                ..+                  
T Consensus        99 ~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~  178 (792)
T KOG1963|consen   99 DNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIV  178 (792)
T ss_pred             ecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEE
Confidence                      0                                                000                  


Q ss_pred             -------------------------------------cCceEEEecCCCcEEEEEccC---CCcceeeecCCCcceEEEE
Q psy8758          86 -------------------------------------KDMTSAAANEDFNLYSYDIRQ---LNSPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        86 -------------------------------------~~~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~i~~~~  125 (198)
                                                           .+.+++++..||+|.+|.-..   .......+.-|...|++++
T Consensus       179 ~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~  258 (792)
T KOG1963|consen  179 HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLS  258 (792)
T ss_pred             EeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeE
Confidence                                                 002488999999999997432   1234556677899999999


Q ss_pred             EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      |+++|.+|++|+..+.+.+|.+.+++....  +.-.++|..+.+|||+.+.+....|+.|.+-...+.+
T Consensus       259 fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfL--PRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~  325 (792)
T KOG1963|consen  259 FSSDGAYLLSGGREGVLVLWQLETGKKQFL--PRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLE  325 (792)
T ss_pred             EecCCceEeecccceEEEEEeecCCCcccc--cccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchh
Confidence            999999999999999999999999884332  3445899999999999999999999999998875544

>KOG0649|consensus

Probab=99.61  E-value=3e-14  Score=94.12  Aligned_cols=147  Identities=14%  Similarity=0.211  Sum_probs=107.9

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC------------ccccccCc---------eEEEecCCCcEEEEEcc
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS------------PLNVHKDM---------TSAAANEDFNLYSYDIR  105 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~------------~~~~~~~~---------~~~~~~~~~~i~~~d~~  105 (198)
                      .|.+-+|+|.++++++ |+.+|.|.+..+.....            +...|..+         .+++++. |.|+-|.-+
T Consensus        12 tvf~qa~sp~~~~l~a-gn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~   89 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFA-GNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWN   89 (325)
T ss_pred             HHHHHhhCCcceEEEE-ecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeeh
Confidence            3566789999888766 68999999998864321            12334433         2455544 999988754


Q ss_pred             CCCc-----ceeee--cCC-----CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCC
Q psy8758         106 QLNS-----PLNVH--KDM-----TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN  173 (198)
Q Consensus       106 ~~~~-----~~~~~--~~~-----~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~  173 (198)
                      ...+     ++...  +.+     -..|++|.+.|..+-+++++.|+.++-||+++|+....+ .+|...+.++.--...
T Consensus        90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~-rGHtDYvH~vv~R~~~  168 (325)
T KOG0649|consen   90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREY-RGHTDYVHSVVGRNAN  168 (325)
T ss_pred             hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEE-cCCcceeeeeeecccC
Confidence            3111     11111  112     235899999999888888889999999999999988877 7999999999885555


Q ss_pred             CEEEEecCCCeEEEEecCCCccc
Q psy8758         174 KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       174 ~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..+++|++||++++||.+|++++
T Consensus       169 ~qilsG~EDGtvRvWd~kt~k~v  191 (325)
T KOG0649|consen  169 GQILSGAEDGTVRVWDTKTQKHV  191 (325)
T ss_pred             cceeecCCCccEEEEecccccee
Confidence            56789999999999999999875

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.61  E-value=4.1e-13  Score=100.38  Aligned_cols=157  Identities=13%  Similarity=0.133  Sum_probs=103.1

Q ss_pred             ceeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~   77 (198)
                      .+...+|||||+.|+..+.+   ..|.+|++.+++. ..+...  .+......|+|+++.++.+.+.++  .|+++|+.+
T Consensus       200 ~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~-~~l~~~--~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~  276 (430)
T PRK00178        200 PILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRR-EQITNF--EGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLAS  276 (430)
T ss_pred             ceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCE-EEccCC--CCCcCCeEECCCCCEEEEEEccCCCceEEEEECCC
Confidence            46788999999988776533   3688899987753 223222  233457899999999887654443  344445443


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-C--CcEEEEEcCCCceee
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-D--KSLRLYLAHQGHSRD  154 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d--~~v~v~d~~~~~~~~  154 (198)
                                                     .....+..+........|+|||+.++..+. +  ..|+++|+.+++...
T Consensus       277 -------------------------------~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~  325 (430)
T PRK00178        277 -------------------------------RQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER  325 (430)
T ss_pred             -------------------------------CCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE
Confidence                                           223334444445567889999998776653 3  357778887777544


Q ss_pred             EEeccCcccEEEEEEcCCCCEEEEecCC-C--eEEEEecCCCcc
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFVISASDE-M--NLRVWKAHASEK  195 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~v~~w~~~~~~~  195 (198)
                      ....+  .......|+|||++|+..+.+ +  .|.++|+.+++.
T Consensus       326 lt~~~--~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~  367 (430)
T PRK00178        326 VTFVG--NYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV  367 (430)
T ss_pred             eecCC--CCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence            43222  234467899999988766543 3  588899987753

>KOG0642|consensus

Probab=99.61  E-value=2.2e-14  Score=104.33  Aligned_cols=153  Identities=14%  Similarity=0.136  Sum_probs=120.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC------ceeeeeee--eeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS------EKLGPIRK--VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~------~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      ++|.|++.+++++.+++|+-||+|+.|++...      ..+..+..  ..|.+.++.+++++....|++ ++.||+++.|
T Consensus       345 gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Lls-cs~DgTvr~w  423 (577)
T KOG0642|consen  345 GPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLS-CSSDGTVRLW  423 (577)
T ss_pred             CceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceee-ecCCceEEee
Confidence            68999999999999999999999999966521      11112211  126888999999998888776 4799999999


Q ss_pred             eccCCCCc-cc---------------------------------------------------------------cccCce
Q psy8758          74 DIRQLNSP-LN---------------------------------------------------------------VHKDMT   89 (198)
Q Consensus        74 d~~~~~~~-~~---------------------------------------------------------------~~~~~~   89 (198)
                      +....... +.                                                               .....+
T Consensus       424 ~~~~~~~~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~  503 (577)
T KOG0642|consen  424 EPTEESPCTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADI  503 (577)
T ss_pred             ccCCcCccccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCe
Confidence            87532210 00                                                               001134


Q ss_pred             EEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758          90 SAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      .+++..|+.|+++|..+ +.++.....|...++++++.|+|-+|++++.|+.+++|.+....+....
T Consensus       504 ~~~~hed~~Ir~~dn~~-~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es  569 (577)
T KOG0642|consen  504 TFTAHEDRSIRFFDNKT-GKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLES  569 (577)
T ss_pred             eEecccCCceecccccc-cccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeecc
Confidence            77888999999999998 7888888999999999999999999999999999999999887766554

>KOG3914|consensus

Probab=99.60  E-value=7e-14  Score=98.00  Aligned_cols=162  Identities=15%  Similarity=0.184  Sum_probs=113.2

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCce-eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEK-LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      ..+..++.++++|.+..+....++++..... .+.+.........+.+.|..+......+ ..-|.++.           
T Consensus        66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~-dkagD~~~-----------  133 (390)
T KOG3914|consen   66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVA-DKAGDVYS-----------  133 (390)
T ss_pred             cccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEE-eecCCcee-----------
Confidence            4456788899999998888877777764432 2222222223333444444444433332 22222222           


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCccc
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH  163 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~  163 (198)
                                     +.+|....  .....+-+|-+.+..++|+||+++++++..|..|++-....-..+..+..+|...
T Consensus       134 ---------------~di~s~~~--~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eF  196 (390)
T KOG3914|consen  134 ---------------FDILSADS--GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEF  196 (390)
T ss_pred             ---------------eeeecccc--cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhh
Confidence                           22333322  3334455789999999999999999999999999999988877777777899999


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |..++.-++ +.|++++.|+++++||+.+|+++
T Consensus       197 VS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L  228 (390)
T KOG3914|consen  197 VSTISLTDN-YLLLSGSGDKTLRLWDITSGKLL  228 (390)
T ss_pred             eeeeeeccC-ceeeecCCCCcEEEEecccCCcc
Confidence            999998765 45899999999999999999987

>KOG4227|consensus

Probab=99.60  E-value=9.8e-14  Score=97.59  Aligned_cols=161  Identities=12%  Similarity=0.199  Sum_probs=121.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC---ceeee--eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS---EKLGP--IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~---~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      +-|+++.||.++++|++|+.|..+++|.++..   +.+++  +..+.|...|.+++|...++.+++ |..++++...|++
T Consensus        57 GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~S-G~~~~~VI~HDiE  135 (609)
T KOG4227|consen   57 GCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYS-GERWGTVIKHDIE  135 (609)
T ss_pred             cccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEec-CCCcceeEeeecc
Confidence            56899999999999999999999999998632   11222  334446678999999987777765 6678888888877


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc-ee
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH-SR  153 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~-~~  153 (198)
                      +.                              +.+..+.  ...+.|..|..+|..+.|++.+.++.|.+||.+... ..
T Consensus       136 t~------------------------------qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~  185 (609)
T KOG4227|consen  136 TK------------------------------QSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPI  185 (609)
T ss_pred             cc------------------------------eeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCC
Confidence            63                              3344332  234589999999999999999999999999998765 22


Q ss_pred             eEE-eccCcccEEEEEEcCC-CCEEEEecCCCeEEEEecCCC
Q psy8758         154 DIY-HTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       154 ~~~-~~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ..+ ..........+.|+|. ..+|++.+..+-+-+||.+-.
T Consensus       186 ~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~  227 (609)
T KOG4227|consen  186 SLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQ  227 (609)
T ss_pred             ceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccc
Confidence            222 1233356778899995 457888888888999998754

>KOG2139|consensus

Probab=99.60  E-value=2.7e-13  Score=94.24  Aligned_cols=146  Identities=16%  Similarity=0.249  Sum_probs=102.2

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCce-e----------eeeeeeeecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK-L----------GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN   69 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~-~----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~   69 (198)
                      ..|+|++|-|.+ +.|+.|... .|.+|..+..-. .          ..+........|+++.|++|+..+++++-.|..
T Consensus       141 rnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsss  219 (445)
T KOG2139|consen  141 RNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSS  219 (445)
T ss_pred             cceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcce
Confidence            468999999965 567777665 589998752211 0          111122234679999999999999887766788


Q ss_pred             EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          70 LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        70 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      |.+||..+..                            ..++.  ....+.+.-+.|||||.+|..+.-|+..++|+...
T Consensus       220 i~iWdpdtg~----------------------------~~pL~--~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q  269 (445)
T KOG2139|consen  220 IMIWDPDTGQ----------------------------KIPLI--PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQ  269 (445)
T ss_pred             EEEEcCCCCC----------------------------ccccc--ccCCCceeeEEEcCCCCEEEEecccceeeeehhcc
Confidence            8888887641                            23333  23456688899999999999999999999996654


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .-.......+. +.|...+|+|+|++|+.+
T Consensus       270 ~wt~erw~lgs-grvqtacWspcGsfLLf~  298 (445)
T KOG2139|consen  270 SWTKERWILGS-GRVQTACWSPCGSFLLFA  298 (445)
T ss_pred             cceecceeccC-CceeeeeecCCCCEEEEE
Confidence            32222221232 489999999999976544

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=4.5e-13  Score=100.27  Aligned_cols=156  Identities=12%  Similarity=0.106  Sum_probs=100.8

Q ss_pred             ceeEEEECCCCceEEEeeC-C--CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASD-E--MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-d--~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~~   77 (198)
                      .+....|||||+.|+..+. +  ..|.++|+.+++. ..+...  ........|+|+++.++.+.+.++.  |+++|+.+
T Consensus       219 ~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~-~~lt~~--~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~t  295 (448)
T PRK04792        219 PLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVR-EKVTSF--PGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIAT  295 (448)
T ss_pred             cccCceECCCCCEEEEEEecCCCcEEEEEECCCCCe-EEecCC--CCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCC
Confidence            4568899999998887653 2  3588889877653 223222  2234578999999999876555553  44444432


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CC--cEEEEEcCCCceee
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DK--SLRLYLAHQGHSRD  154 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~--~v~v~d~~~~~~~~  154 (198)
                                                     .....+..+.......+|+|||+.|+..+. ++  .|+++|+.+++...
T Consensus       296 -------------------------------g~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~  344 (448)
T PRK04792        296 -------------------------------KALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR  344 (448)
T ss_pred             -------------------------------CCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE
Confidence                                           223444444455677899999998876653 33  57777887776554


Q ss_pred             EEeccCcccEEEEEEcCCCCEEEEecC-CC--eEEEEecCCCc
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFVISASD-EM--NLRVWKAHASE  194 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg--~v~~w~~~~~~  194 (198)
                      ....+  ......+|+|||++|+..+. ++  .|.++|+.+++
T Consensus       345 Lt~~g--~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~  385 (448)
T PRK04792        345 LTFEG--EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGA  385 (448)
T ss_pred             EecCC--CCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCC
Confidence            43222  23445789999998876544 33  46667877765

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=7.4e-13  Score=98.48  Aligned_cols=162  Identities=12%  Similarity=0.134  Sum_probs=100.4

Q ss_pred             eeEEEECCCCceEEEeeC-CC----eEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           4 VTHTVWSLDNKFVISASD-EM----NLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~-d~----~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ....+|||||+.|+..+. +|    .+.+|++..+.  ....+... .........|+|||+.|+.+...++...+|.+ 
T Consensus       233 ~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~-~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~-  310 (428)
T PRK01029        233 QLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNE-AFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIM-  310 (428)
T ss_pred             ccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecC-CCCCcCCeEECCCCCEEEEEECCCCCceEEEE-
Confidence            346789999998876543 22    33446765431  22222211 11234578999999998877655554333322 


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC---CcEEEEEcCCCcee
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---KSLRLYLAHQGHSR  153 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---~~v~v~d~~~~~~~  153 (198)
                                                ++...+.....+..+...+....|||||+.|+..+.+   ..|.+||+.+++..
T Consensus       311 --------------------------~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~  364 (428)
T PRK01029        311 --------------------------QIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY  364 (428)
T ss_pred             --------------------------ECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE
Confidence                                      1111012233344444566788999999988876543   46999999988775


Q ss_pred             eEEeccCcccEEEEEEcCCCCEEEEecC---CCeEEEEecCCCcc
Q psy8758         154 DIYHTKRMQHVTHTVWSLDNKFVISASD---EMNLRVWKAHASEK  195 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~v~~w~~~~~~~  195 (198)
                      ...  .....+..+.|+|||+.|+..+.   ...|+++|+.+++.
T Consensus       365 ~Lt--~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~  407 (428)
T PRK01029        365 QLT--TSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKT  407 (428)
T ss_pred             Ecc--CCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence            543  22245678999999998774432   35688999887654

>KOG4227|consensus

Probab=99.58  E-value=1.9e-13  Score=96.20  Aligned_cols=188  Identities=12%  Similarity=0.128  Sum_probs=141.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|.|++|....+++++|..+++|.+.|+++.+.+..+......+.|..+..+|..+.++++ +.++.+.+||.+.....
T Consensus       106 SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~-t~~~~V~~~D~Rd~~~~  184 (609)
T KOG4227|consen  106 SNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVV-TRAKLVSFIDNRDRQNP  184 (609)
T ss_pred             cceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEE-ecCceEEEEeccCCCCC
Confidence            35899999999999999999999999999988876666554455689999999997776665 68999999999854421


Q ss_pred             -----------------cccccCceEEEecCCCcEEEEEccCCCcceeeecC---CCc---ceEEEEEccCCCEEEEeec
Q psy8758          82 -----------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MTS---AVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        82 -----------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~---~i~~~~~sp~~~~l~~~~~  138 (198)
                                       +.+-...++++.+..+.+-+||.+.+..++.....   .+.   .-..+.|+|+|..|.+--.
T Consensus       185 ~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR  264 (609)
T KOG4227|consen  185 ISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRR  264 (609)
T ss_pred             CceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhc
Confidence                             22233457889999999999999986666554432   222   2367889999998887766


Q ss_pred             CCcEEEEEcCCCceeeEEeccCc-------ccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRM-------QHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ...-.+||+.+..+.... ..|.       ..+.+++|..|-. +++|+.+=.|++|.+..
T Consensus       265 ~~~P~~~D~~S~R~~V~k-~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~  323 (609)
T KOG4227|consen  265 GKCPLYFDFISQRCFVLK-SDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPR  323 (609)
T ss_pred             cCCCEEeeeecccceeEe-ccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCC
Confidence            666778888875553332 2332       3577888876654 89999999999999853

>KOG1524|consensus

Probab=99.58  E-value=8e-14  Score=101.41  Aligned_cols=168  Identities=13%  Similarity=0.089  Sum_probs=118.1

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc----------
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN----------   83 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~----------   83 (198)
                      ..++.+++||.+.+.+- .++..+.+..  |.+.+.+-.|+|+|.-++++| +||.|++|.-..+.+...          
T Consensus        76 d~~~i~s~DGkf~il~k-~~rVE~sv~A--H~~A~~~gRW~~dGtgLlt~G-EDG~iKiWSrsGMLRStl~Q~~~~v~c~  151 (737)
T KOG1524|consen   76 DTLLICSNDGRFVILNK-SARVERSISA--HAAAISSGRWSPDGAGLLTAG-EDGVIKIWSRSGMLRSTVVQNEESIRCA  151 (737)
T ss_pred             ceEEEEcCCceEEEecc-cchhhhhhhh--hhhhhhhcccCCCCceeeeec-CCceEEEEeccchHHHHHhhcCceeEEE
Confidence            36788889999988774 4454444444  577889999999999999875 999999998654432211          


Q ss_pred             ---cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC
Q psy8758          84 ---VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR  160 (198)
Q Consensus        84 ---~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~  160 (198)
                         +..+.++.  ...+.+.+=.+.. ...+-..+.|.+-|.+++|+|....+++|+.|-..++||... ..++.. ..|
T Consensus       152 ~W~p~S~~vl~--c~g~h~~IKpL~~-n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G-~~Lf~S-~~~  226 (737)
T KOG1524|consen  152 RWAPNSNSIVF--CQGGHISIKPLAA-NSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG-ANLFTS-AAE  226 (737)
T ss_pred             EECCCCCceEE--ecCCeEEEeeccc-ccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC-cccccC-Chh
Confidence               11222222  2334455555554 344556788999999999999999999999999999999754 444433 578


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ..+|++++|.|+ +.++.++. ++.++=.++.
T Consensus       227 ey~ITSva~npd-~~~~v~S~-nt~R~~~p~~  256 (737)
T KOG1524|consen  227 EYAITSVAFNPE-KDYLLWSY-NTARFSSPRV  256 (737)
T ss_pred             ccceeeeeeccc-cceeeeee-eeeeecCCCc
Confidence            889999999999 55555553 3444433333

>KOG1354|consensus

Probab=99.58  E-value=2.7e-13  Score=93.75  Aligned_cols=189  Identities=14%  Similarity=0.289  Sum_probs=132.3

Q ss_pred             cceeEEEECCCCc--eEEEeeCCCeEEEEEccCCcee----------------------------------eeeeeeeec
Q psy8758           2 QHVTHTVWSLDNK--FVISASDEMNLRVWKAHASEKL----------------------------------GPIRKVVMS   45 (198)
Q Consensus         2 ~~v~~~~~s~~~~--~l~~~~~d~~i~i~~~~~~~~~----------------------------------~~~~~~~~~   45 (198)
                      ++|+.+.|.++++  .++..++|.+|++|.+......                                  +.+....|.
T Consensus        85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt  164 (433)
T KOG1354|consen   85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT  164 (433)
T ss_pred             hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce
Confidence            4688899998775  6667778999999988633210                                  111112255


Q ss_pred             CceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC----------------------ccccccCceEEEecCCCcEEEEE
Q psy8758          46 LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS----------------------PLNVHKDMTSAAANEDFNLYSYD  103 (198)
Q Consensus        46 ~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~----------------------~~~~~~~~~~~~~~~~~~i~~~d  103 (198)
                      -.++++.++.|.+.++++  +|-.|.+|+++-..+                      .+.++...+++-.+..|+|++.|
T Consensus       165 yhiNSIS~NsD~Et~lSA--DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcD  242 (433)
T KOG1354|consen  165 YHINSISVNSDKETFLSA--DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCD  242 (433)
T ss_pred             eEeeeeeecCccceEeec--cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEee
Confidence            568899999999988763  788999999864332                      23344456788889999999999


Q ss_pred             ccCCCcce---eeec------------CCCcceEEEEEccCCCEEEEeecCCcEEEEEcC-CCceeeEEeccCc------
Q psy8758         104 IRQLNSPL---NVHK------------DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-QGHSRDIYHTKRM------  161 (198)
Q Consensus       104 ~~~~~~~~---~~~~------------~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~~~~------  161 (198)
                      +++..-+.   +.++            .--..|..+.|+++|+++++-+. -+|++||++ ..+++..+ +-|.      
T Consensus       243 mR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~-~vh~~lr~kL  320 (433)
T KOG1354|consen  243 MRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETY-PVHEYLRSKL  320 (433)
T ss_pred             chhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEE-eehHhHHHHH
Confidence            99521111   1111            11235888999999999998764 579999995 34444443 2221      


Q ss_pred             ---------ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         162 ---------QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       162 ---------~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                               ..-..++|+.++.+++||+..+.++++++..|.
T Consensus       321 c~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  321 CSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             HHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence                     123567899999999999999999999976654

>KOG1963|consensus

Probab=99.55  E-value=7.5e-13  Score=100.86  Aligned_cols=162  Identities=10%  Similarity=0.122  Sum_probs=123.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccC--CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHA--SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .+++.++||+++++|+|..||+|.+|.-..  +.....-.-+-|...|.++.|+++|.++++ |+..+-+.+|.+.+.  
T Consensus       207 ~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlS-GG~E~VLv~Wq~~T~--  283 (792)
T KOG1963|consen  207 NITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLS-GGREGVLVLWQLETG--  283 (792)
T ss_pred             cceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEee-cccceEEEEEeecCC--
Confidence            368999999999999999999999997433  232233333447788999999999999987 457777777877763  


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE----
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY----  156 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~----  156 (198)
                                                  + .+-++.-.++|..+.+|||+.+.+....|+.|.+....+......+    
T Consensus       284 ----------------------------~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~  334 (792)
T KOG1963|consen  284 ----------------------------K-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIK  334 (792)
T ss_pred             ----------------------------C-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCcc
Confidence                                        2 3444556789999999999999999999999999988654332222    


Q ss_pred             ------eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         157 ------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       157 ------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                            .....+-.+.++++|..+.++-.+..|.|.+||+-+.+.+
T Consensus       335 ~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i  380 (792)
T KOG1963|consen  335 PPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTI  380 (792)
T ss_pred             CCCccccccccccceeEEEcCCCCceeecCCCceEEEEecccccee
Confidence                  1112355788899997777888889999999999876654

>KOG4497|consensus

Probab=99.55  E-value=5.6e-13  Score=91.79  Aligned_cols=179  Identities=18%  Similarity=0.230  Sum_probs=120.0

Q ss_pred             ceeEEEECCCCceEEE-eeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVIS-ASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .|.-+.|..|..+++. ...++.|.+|++...+-...+..  ...++..++|+|+|+.++.+...+-.|.+|.+.+....
T Consensus        50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIde--g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~  127 (447)
T KOG4497|consen   50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDE--GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY  127 (447)
T ss_pred             HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEecc--CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence            4556778777765544 46788999999987765555554  46678999999999999998888999999999876644


Q ss_pred             cccccC--ceEEEecCCCcEEEEE-ccCC-----------CcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          82 LNVHKD--MTSAAANEDFNLYSYD-IRQL-----------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        82 ~~~~~~--~~~~~~~~~~~i~~~d-~~~~-----------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      +-.|..  ...++...||+..-.- .+.-           -..++.+....-..+.+.|+|||..|++         ||.
T Consensus       128 ~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laV---------wd~  198 (447)
T KOG4497|consen  128 LLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAV---------WDN  198 (447)
T ss_pred             EecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEE---------ecc
Confidence            433322  2345555666543221 1110           1223344445556788999999887664         543


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .-...+..++.+  -.+..++|+|.+++|+.|+.|+.+++.+--+-+
T Consensus       199 ~Leykv~aYe~~--lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk  243 (447)
T KOG4497|consen  199 VLEYKVYAYERG--LGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWK  243 (447)
T ss_pred             hhhheeeeeeec--cceeEEEeccccceEEeeccchhhhhhceeeee
Confidence            332222233222  468889999999999999999999887654433

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.54  E-value=1.3e-12  Score=97.44  Aligned_cols=152  Identities=13%  Similarity=0.129  Sum_probs=95.6

Q ss_pred             eeEEEECCCCceEE-EeeCCCeEEEEEcc--CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           4 VTHTVWSLDNKFVI-SASDEMNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~-~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +...+|+|||+.|+ +.+.++...||.++  .+. ...+..  +........|+||++.++.++..++...+|.+..   
T Consensus       242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~--~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~---  315 (427)
T PRK02889        242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQ--SSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPA---  315 (427)
T ss_pred             ccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCC--CCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEEC---
Confidence            45789999999876 45677777776653  333 333322  2334567889999999887654455555554331   


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC---cEEEEEcCCCceeeEEe
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK---SLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~---~v~v~d~~~~~~~~~~~  157 (198)
                                              .  ......+..........+|+|||++++..+.++   .|.+||+.+++..... 
T Consensus       316 ------------------------~--~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt-  368 (427)
T PRK02889        316 ------------------------S--GGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALT-  368 (427)
T ss_pred             ------------------------C--CCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEcc-
Confidence                                    1  111122211222334678999999998776554   6999999988765443 


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCC---eEEEEec
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEM---NLRVWKA  190 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg---~v~~w~~  190 (198)
                      ..  .....+.|+|||+.|+..+.++   .+.+.++
T Consensus       369 ~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~  402 (427)
T PRK02889        369 DT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSS  402 (427)
T ss_pred             CC--CCccCceECCCCCEEEEEEecCCCEEEEEEEC
Confidence            22  2346789999999888765443   3555555

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=1.3e-11  Score=92.47  Aligned_cols=165  Identities=16%  Similarity=0.183  Sum_probs=108.9

Q ss_pred             CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec--CCccEEEEeccCCCCc-c------------ccccC
Q psy8758          23 MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN--EDFNLYSYDIRQLNSP-L------------NVHKD   87 (198)
Q Consensus        23 ~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~d~~i~~~d~~~~~~~-~------------~~~~~   87 (198)
                      ..|.++|.... ..+.+..  +...+....|+||++.|+.+..  .+..|++||+.+.... +            .....
T Consensus       182 ~~l~~~d~dg~-~~~~lt~--~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~  258 (435)
T PRK05137        182 KRLAIMDQDGA-NVRYLTD--GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGR  258 (435)
T ss_pred             eEEEEECCCCC-CcEEEec--CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCC
Confidence            36778887443 3344432  4567899999999999887653  2467999998754321 1            11112


Q ss_pred             ceEEEecCCCc--EEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-C--CcEEEEEcCCCceeeEEeccCcc
Q psy8758          88 MTSAAANEDFN--LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-D--KSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        88 ~~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d--~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                      .++++.+.++.  |++||+..  .....+..+.......+|+|||+.|+..+. +  ..|+++|+..+......  .+..
T Consensus       259 ~la~~~~~~g~~~Iy~~d~~~--~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt--~~~~  334 (435)
T PRK05137        259 KVVMSLSQGGNTDIYTMDLRS--GTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRIS--FGGG  334 (435)
T ss_pred             EEEEEEecCCCceEEEEECCC--CceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEee--cCCC
Confidence            34445555554  77778875  344556666666778999999998887664 3  36888898776655443  2234


Q ss_pred             cEEEEEEcCCCCEEEEecCC---CeEEEEecCCCc
Q psy8758         163 HVTHTVWSLDNKFVISASDE---MNLRVWKAHASE  194 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~~  194 (198)
                      .+..+.|+|||+.|+..+.+   ..|.+||+.++.
T Consensus       335 ~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~  369 (435)
T PRK05137        335 RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG  369 (435)
T ss_pred             cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence            56778999999998876543   368888876543

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=1.5e-11  Score=91.71  Aligned_cols=165  Identities=13%  Similarity=0.066  Sum_probs=105.8

Q ss_pred             eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec--CCccEEEEeccCCCCc----ccc---------ccCc
Q psy8758          24 NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN--EDFNLYSYDIRQLNSP----LNV---------HKDM   88 (198)
Q Consensus        24 ~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~d~~i~~~d~~~~~~~----~~~---------~~~~   88 (198)
                      .|.++|.+... .+.+..  +...+...+|+|||+.++.+..  .+..++++++......    +..         ....
T Consensus       180 ~l~~~d~dg~~-~~~lt~--~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~  256 (429)
T PRK03629        180 ELRVSDYDGYN-QFVVHR--SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK  256 (429)
T ss_pred             eEEEEcCCCCC-CEEeec--CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCE
Confidence            68888876443 333332  3456889999999999887642  2456899998754311    111         1112


Q ss_pred             eEEEecCCC--cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC-C--cEEEEEcCCCceeeEEeccCccc
Q psy8758          89 TSAAANEDF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-K--SLRLYLAHQGHSRDIYHTKRMQH  163 (198)
Q Consensus        89 ~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d-~--~v~v~d~~~~~~~~~~~~~~~~~  163 (198)
                      ++++...++  .|++||+.+ + ....+..+...+....|+|||+.|+..+.+ +  .|+++|+.+++.....  .+...
T Consensus       257 La~~~~~~g~~~I~~~d~~t-g-~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt--~~~~~  332 (429)
T PRK03629        257 LAFALSKTGSLNLYVMDLAS-G-QIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRIT--WEGSQ  332 (429)
T ss_pred             EEEEEcCCCCcEEEEEECCC-C-CEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEee--cCCCC
Confidence            333434444  588899886 3 344555455567889999999988776653 4  4555577666554432  22244


Q ss_pred             EEEEEEcCCCCEEEEecCC---CeEEEEecCCCcc
Q psy8758         164 VTHTVWSLDNKFVISASDE---MNLRVWKAHASEK  195 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~~~  195 (198)
                      .....|+|||++|+..+.+   ..|++||+.+++.
T Consensus       333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~  367 (429)
T PRK03629        333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV  367 (429)
T ss_pred             ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe
Confidence            5678999999988775433   3588899987753

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=5.2e-12  Score=94.45  Aligned_cols=166  Identities=13%  Similarity=0.099  Sum_probs=107.7

Q ss_pred             CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC--CccEEEEeccCCCCc-------------cccccC
Q psy8758          23 MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE--DFNLYSYDIRQLNSP-------------LNVHKD   87 (198)
Q Consensus        23 ~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~~~~~~-------------~~~~~~   87 (198)
                      ..|.+||... ...+.+..  +...+....|+|+++.++.+...  ...|++||+......             +.....
T Consensus       184 ~~l~i~D~~g-~~~~~lt~--~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~  260 (433)
T PRK04922        184 YALQVADSDG-YNPQTILR--SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGR  260 (433)
T ss_pred             EEEEEECCCC-CCceEeec--CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCC
Confidence            3588888754 33344433  35568899999999999886533  346999998654321             111112


Q ss_pred             ceEEEecCCC--cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCc--EEEEEcCCCceeeEEeccCcc
Q psy8758          88 MTSAAANEDF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKS--LRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        88 ~~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~--v~v~d~~~~~~~~~~~~~~~~  162 (198)
                      .++++.+.++  .|++||+.+ + ....+..+.......+|+|||+.|+..+. ++.  |+++|+.+++......  +..
T Consensus       261 ~l~~~~s~~g~~~Iy~~d~~~-g-~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~--~g~  336 (433)
T PRK04922        261 RLALTLSRDGNPEIYVMDLGS-R-QLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF--QGN  336 (433)
T ss_pred             EEEEEEeCCCCceEEEEECCC-C-CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec--CCC
Confidence            2344444444  588999886 3 34555555555677899999998887664 444  7777777766544332  223


Q ss_pred             cEEEEEEcCCCCEEEEecCCC---eEEEEecCCCcc
Q psy8758         163 HVTHTVWSLDNKFVISASDEM---NLRVWKAHASEK  195 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg---~v~~w~~~~~~~  195 (198)
                      ....++|+|||++|+..+.++   .|.+||+.+++.
T Consensus       337 ~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~  372 (433)
T PRK04922        337 YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV  372 (433)
T ss_pred             CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe
Confidence            455789999999988654332   699999987764

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.52  E-value=1.8e-10  Score=83.69  Aligned_cols=191  Identities=15%  Similarity=0.210  Sum_probs=123.5

Q ss_pred             eEEEECCCCceEEEee-CCCeEEEEEccCC-ceeeeeeeee-----------ecCceeeEEeCCCCCeEEEEecCCccEE
Q psy8758           5 THTVWSLDNKFVISAS-DEMNLRVWKAHAS-EKLGPIRKVV-----------MSLRSNMVSWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~-~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~d~~i~   71 (198)
                      ..++++|++++++++. .+|.+.++++... ..........           ......++.|+|++++++++.-....|.
T Consensus        90 ~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~  169 (345)
T PF10282_consen   90 CHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVY  169 (345)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEE
T ss_pred             EEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEE
Confidence            4688999999998887 5899999999863 3222211111           1233568999999999998765567899


Q ss_pred             EEeccCCCCcc-------------------ccccCceEEEecCCCcEEEEEccCCCcc---eeeecC------CCcceEE
Q psy8758          72 SYDIRQLNSPL-------------------NVHKDMTSAAANEDFNLYSYDIRQLNSP---LNVHKD------MTSAVTS  123 (198)
Q Consensus        72 ~~d~~~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~------~~~~i~~  123 (198)
                      +|++......+                   .......+++...++.|.++++......   +..+..      .......
T Consensus       170 ~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  249 (345)
T PF10282_consen  170 VYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAE  249 (345)
T ss_dssp             EEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEE
T ss_pred             EEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCcee
Confidence            99987544211                   1112245677778888999998831212   222211      1125788


Q ss_pred             EEEccCCCEEEEee-cCCcEEEEEcCC--CceeeEEe-ccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecC--CCcc
Q psy8758         124 VDYSPTGREFVAGG-YDKSLRLYLAHQ--GHSRDIYH-TKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAH--ASEK  195 (198)
Q Consensus       124 ~~~sp~~~~l~~~~-~d~~v~v~d~~~--~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~--~~~~  195 (198)
                      |+++|||++|.++. ..+.|.+|++..  +++...-. .......+.++++|+|++|+++. .++.|.+|+++  +|++
T Consensus       250 i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l  328 (345)
T PF10282_consen  250 IAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKL  328 (345)
T ss_dssp             EEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred             EEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcE
Confidence            99999999887765 467899999943  44432221 12234589999999999988765 56889999774  5553

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2321|consensus

Probab=99.52  E-value=2.2e-12  Score=94.62  Aligned_cols=191  Identities=13%  Similarity=0.195  Sum_probs=126.3

Q ss_pred             ceeEEEECCCCceE-EEeeCCCeEEEEEccCCce---------eeeeee-------------------ee---------e
Q psy8758           3 HVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEK---------LGPIRK-------------------VV---------M   44 (198)
Q Consensus         3 ~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~---------~~~~~~-------------------~~---------~   44 (198)
                      ..+.+..+|||+++ |+|.....|++||+..-..         +..+..                   |.         .
T Consensus        53 ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~RI  132 (703)
T KOG2321|consen   53 ASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRTRI  132 (703)
T ss_pred             ccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeeeeec
Confidence            35788999999975 5666888999999864321         000000                   00         0


Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--Cccccc-----------cCceEEEecCCCcEEEEEccCCCcce
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--SPLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPL  111 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--~~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~  111 (198)
                      +..-..++++.-..-|+.+| ....|+=+++.++.  .++...           -..+++.|+.+|.+..||.+. ....
T Consensus       133 P~~GRDm~y~~~scDly~~g-sg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~-ksrv  210 (703)
T KOG2321|consen  133 PKFGRDMKYHKPSCDLYLVG-SGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRD-KSRV  210 (703)
T ss_pred             CcCCccccccCCCccEEEee-cCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchh-hhhh
Confidence            01112344443333444443 44567777776543  222221           224688888999999999997 3333


Q ss_pred             eeec------CCCc-----ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC--CCEEEE
Q psy8758         112 NVHK------DMTS-----AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD--NKFVIS  178 (198)
Q Consensus       112 ~~~~------~~~~-----~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~  178 (198)
                      ..+.      .|+.     .|++++|+.+|-.+++|..+|.+.|||++..+++.....+..-+|..+.|.+.  +..+++
T Consensus       211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S  290 (703)
T KOG2321|consen  211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS  290 (703)
T ss_pred             eeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEe
Confidence            3332      2333     39999999999999999999999999999999887764555678999999775  345554


Q ss_pred             ecCCCeEEEEecCCCccc
Q psy8758         179 ASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       179 ~~~dg~v~~w~~~~~~~~  196 (198)
                      . ....++|||-.+|+..
T Consensus       291 ~-Dk~~~kiWd~~~Gk~~  307 (703)
T KOG2321|consen  291 M-DKRILKIWDECTGKPM  307 (703)
T ss_pred             c-chHHhhhcccccCCce
Confidence            3 4567899999998864

>KOG0771|consensus

Probab=99.52  E-value=1.7e-13  Score=96.56  Aligned_cols=112  Identities=19%  Similarity=0.258  Sum_probs=88.9

Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE-------
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY-------  156 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~-------  156 (198)
                      .+.+..+++++.||++++|+..+ -..+.....|...|.++.|+|||++|++-+.| ..+||+.+++..+...       
T Consensus       153 ~~~gs~latgg~dg~lRv~~~Ps-~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~  230 (398)
T KOG0771|consen  153 NGDGSKLATGGTDGTLRVWEWPS-MLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDE  230 (398)
T ss_pred             cCCCCEeeeccccceEEEEecCc-chhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccch
Confidence            34557899999999999999665 35556666788999999999999999999999 8999999876211100       


Q ss_pred             ---------------------ec-------------------------cCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         157 ---------------------HT-------------------------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       157 ---------------------~~-------------------------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                                           ..                         .....|.+++.++||+++|.|+.||.|.+++.
T Consensus       231 ~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~  310 (398)
T KOG0771|consen  231 MFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDA  310 (398)
T ss_pred             hhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEe
Confidence                                 00                         01237899999999999999999999999999


Q ss_pred             CCCcccc
Q psy8758         191 HASEKLE  197 (198)
Q Consensus       191 ~~~~~~~  197 (198)
                      .+.+.+.
T Consensus       311 ~~lq~~~  317 (398)
T KOG0771|consen  311 KSLQRLQ  317 (398)
T ss_pred             ceeeeeE
Confidence            8877654

>KOG1064|consensus

Probab=99.52  E-value=1.3e-13  Score=112.02  Aligned_cols=183  Identities=15%  Similarity=0.234  Sum_probs=140.7

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-Cc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-SP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~~   81 (198)
                      .|.++.=+|...+.++|+.||.+++|....++.+.+.+.... ..|+.+.|+.+|...-++ ..||.+.+|...... ..
T Consensus      2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~-d~dg~l~l~q~~pk~~~s 2287 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN-SRVTRSRFNHQGNKFGIV-DGDGDLSLWQASPKPYTS 2287 (2439)
T ss_pred             ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc-chhhhhhhcccCCceeee-ccCCceeecccCCcceec
Confidence            456666678888999999999999999988888888777654 789999999999887664 689999999987322 11


Q ss_pred             cccccC----c-----eEEEe---cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          82 LNVHKD----M-----TSAAA---NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        82 ~~~~~~----~-----~~~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      ...|..    .     .+++.   +.++.+.+||.--+...-...+.|.+.++++++-|..+.|++|+.+|.|++||++.
T Consensus      2288 ~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rq 2367 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQ 2367 (2439)
T ss_pred             cccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHH
Confidence            222322    1     12222   35688999997643333333378999999999999999999999999999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccccC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH  198 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~~  198 (198)
                      .+++..+..          +. ...++++++..|.++||++.....+.|
T Consensus      2368 rql~h~~~~----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2368 RQLRHTFQA----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHT 2405 (2439)
T ss_pred             HHHHHHhhh----------hh-hhheeeccCcccceEEEEccccchhhc
Confidence            888776621          44 556899999999999999988766543

>KOG4547|consensus

Probab=99.52  E-value=5.2e-12  Score=92.66  Aligned_cols=179  Identities=12%  Similarity=0.242  Sum_probs=133.5

Q ss_pred             CCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEe------CC-------------CCCeEEEEecCCcc
Q psy8758          10 SLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSW------NP-------------MEAFVFTAANEDFN   69 (198)
Q Consensus        10 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~------~~-------------~~~~~~~~~~~d~~   69 (198)
                      .|-..++|....||.+++|+...++....+.... ..+...+..|      +|             .+..+++-|...|.
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~   81 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS   81 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence            3456789999999999999998877655554332 1222333333      22             23344455677899


Q ss_pred             EEEEeccCCCCcc---------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE
Q psy8758          70 LYSYDIRQLNSPL---------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV  134 (198)
Q Consensus        70 i~~~d~~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~  134 (198)
                      |.+|++.......               ...+..++.+++.|+.+..|+... ...+......+..+.+++.+|||..++
T Consensus        82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~-~~~~~~~~~~~~~~~sl~is~D~~~l~  160 (541)
T KOG4547|consen   82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKE-KVIIRIWKEQKPLVSSLCISPDGKILL  160 (541)
T ss_pred             EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEeccc-ceeeeeeccCCCccceEEEcCCCCEEE
Confidence            9999987554221               123335689999999999999998 677778888888899999999999999


Q ss_pred             EeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC-----CCEEEEe-cCCCeEEEEecCC
Q psy8758         135 AGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD-----NKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      +++  +.|++||+++++.+..+ .+|.++|+.+.|--+     |.+++++ ..+..+.+|-+..
T Consensus       161 ~as--~~ik~~~~~~kevv~~f-tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  161 TAS--RQIKVLDIETKEVVITF-TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             ecc--ceEEEEEccCceEEEEe-cCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            886  58999999999999888 899999999999876     6766654 4556677886654

>KOG1334|consensus

Probab=99.50  E-value=4.9e-13  Score=96.13  Aligned_cols=196  Identities=19%  Similarity=0.246  Sum_probs=138.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceee--------------------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG--------------------------------------------   37 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--------------------------------------------   37 (198)
                      +-|+.+.|+..|..+++|+.|..+.+||...+....                                            
T Consensus       143 GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~  222 (559)
T KOG1334|consen  143 GCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYV  222 (559)
T ss_pred             CccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccccce
Confidence            568899999999999999999999999986443210                                            


Q ss_pred             --eeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--------------------cccccCceEEEecC
Q psy8758          38 --PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--------------------LNVHKDMTSAAANE   95 (198)
Q Consensus        38 --~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--------------------~~~~~~~~~~~~~~   95 (198)
                        +.....|.++|..++.-|+.++-|.+++.|+.++-+|+++....                    ..+.....+++++.
T Consensus       223 e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~  302 (559)
T KOG1334|consen  223 ENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGS  302 (559)
T ss_pred             ecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCCh
Confidence              11112356677888888888887777889999999998754321                    11112245889999


Q ss_pred             CCcEEEEEccCCCcc-----eeeec------CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC--C----------ce
Q psy8758          96 DFNLYSYDIRQLNSP-----LNVHK------DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ--G----------HS  152 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~-----~~~~~------~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~--~----------~~  152 (198)
                      |-.+++||.+...+.     +..+.      ...-.|++++|+.++.-|.++-.|-.|+++.-..  |          ..
T Consensus       303 dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~  382 (559)
T KOG1334|consen  303 DQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQY  382 (559)
T ss_pred             hhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhc
Confidence            999999998753222     23332      2234699999998887777777788899995432  2          22


Q ss_pred             eeEEeccCc--ccEEEEEE-cCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         153 RDIYHTKRM--QHVTHTVW-SLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       153 ~~~~~~~~~--~~v~~~~~-s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ....+.+|.  ..|..+-| -|..+|+++|+.-|.|.+|+-.+++.|.
T Consensus       383 ~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~  430 (559)
T KOG1334|consen  383 VKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIR  430 (559)
T ss_pred             cchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHH
Confidence            223245664  34666654 6788999999999999999999988763

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.50  E-value=1.1e-10  Score=83.77  Aligned_cols=187  Identities=13%  Similarity=0.083  Sum_probs=126.5

Q ss_pred             EECCCCceEEEeeC----------CCeEEEEEccCCceeeeeeeeee-----cCceeeEEeCCCCCeEEEEecC-CccEE
Q psy8758           8 VWSLDNKFVISASD----------EMNLRVWKAHASEKLGPIRKVVM-----SLRSNMVSWNPMEAFVFTAANE-DFNLY   71 (198)
Q Consensus         8 ~~s~~~~~l~~~~~----------d~~i~i~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~-d~~i~   71 (198)
                      .+||||+.++++..          +..|.+||..+.+....+.....     ......++++|+|++++++.-. +..+-
T Consensus        52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~  131 (352)
T TIGR02658        52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG  131 (352)
T ss_pred             eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence            38999998877654          67999999999887666653211     1123478999999999876433 78888


Q ss_pred             EEeccCCCCc----------------------------------------------ccc-------c------cCceEEE
Q psy8758          72 SYDIRQLNSP----------------------------------------------LNV-------H------KDMTSAA   92 (198)
Q Consensus        72 ~~d~~~~~~~----------------------------------------------~~~-------~------~~~~~~~   92 (198)
                      +.|+.+.+..                                              +..       +      .+..+..
T Consensus       132 VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~v  211 (352)
T TIGR02658       132 VVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWP  211 (352)
T ss_pred             EEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEE
Confidence            9888654310                                              000       0      0111222


Q ss_pred             ecCCCcEEEEEccCC----CcceeeecC-------CCcceEEEEEccCCCEEEEee----------cCCcEEEEEcCCCc
Q psy8758          93 ANEDFNLYSYDIRQL----NSPLNVHKD-------MTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQGH  151 (198)
Q Consensus        93 ~~~~~~i~~~d~~~~----~~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~----------~d~~v~v~d~~~~~  151 (198)
                       +..|+|.+.|+...    ..+...+..       .+..+.-++++|+++.+.+..          ..+.|.++|..+++
T Consensus       212 -s~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k  290 (352)
T TIGR02658       212 -TYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK  290 (352)
T ss_pred             -ecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe
Confidence             22377888885431    122222211       233445599999999877742          12579999999999


Q ss_pred             eeeEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~  197 (198)
                      .+..+..+  ..+..++++||++ +|++.. .++.|.+.|..+++.++
T Consensus       291 vi~~i~vG--~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~  336 (352)
T TIGR02658       291 RLRKIELG--HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELS  336 (352)
T ss_pred             EEEEEeCC--CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEe
Confidence            99888665  5899999999999 777655 67889999999998764

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG0974|consensus

Probab=99.46  E-value=3.3e-12  Score=99.09  Aligned_cols=152  Identities=13%  Similarity=0.140  Sum_probs=119.8

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccccc
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHK   86 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~   86 (198)
                      +-++++.-++++|+.-+.|.+|+....+...  ....|.+.+..+.|+.++.+++++ ++|..+++|++.+.        
T Consensus       139 ~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~--~l~GHeG~iF~i~~s~dg~~i~s~-SdDRsiRlW~i~s~--------  207 (967)
T KOG0974|consen  139 IGDSAEELYIASGSVFGEIIVWKPHEDNKPI--RLKGHEGSIFSIVTSLDGRYIASV-SDDRSIRLWPIDSR--------  207 (967)
T ss_pred             EeccCcEEEEEeccccccEEEEeccccCCcc--eecccCCceEEEEEccCCcEEEEE-ecCcceeeeecccc--------
Confidence            3456666789999999999999987333222  333478899999999999999876 68999988888764        


Q ss_pred             CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEE
Q psy8758          87 DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH  166 (198)
Q Consensus        87 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~  166 (198)
                                           ....-..-+|...+..+.|.|+  .+++++.|.+.++|+.+..+.. .+.......++.
T Consensus       208 ---------------------~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l~-~y~~h~g~~iw~  263 (967)
T KOG0974|consen  208 ---------------------EVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQLE-VYDEHSGKGIWK  263 (967)
T ss_pred             ---------------------cccCcccccccceeEEEEeccc--eeEEeccceEEEEEecccceeh-hhhhhhhcceeE
Confidence                                 2333355679999999999998  8999999999999976554443 443333467999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         167 TVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       167 ~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ++..++...++|++.|+.+++|++.+.
T Consensus       264 ~~~~~~~~~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  264 IAVPIGVIIKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             EEEcCCceEEEeeccCcchhhhhhhcc
Confidence            999999999999999999999998654

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.46  E-value=3.4e-11  Score=89.67  Aligned_cols=163  Identities=15%  Similarity=0.161  Sum_probs=94.7

Q ss_pred             eeEEEECCCCce--E-EEeeCC--CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           4 VTHTVWSLDNKF--V-ISASDE--MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         4 v~~~~~s~~~~~--l-~~~~~d--~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +..-+|||||+.  + ++...+  ..|.+.++.+++. ..+...  .+......|+|||+.|+.+.+.++...+      
T Consensus       187 ~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-~~lt~~--~g~~~~p~wSPDG~~Laf~s~~~g~~di------  257 (428)
T PRK01029        187 SITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-KKILAL--QGNQLMPTFSPRKKLLAFISDRYGNPDL------  257 (428)
T ss_pred             cccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-eEeecC--CCCccceEECCCCCEEEEEECCCCCcce------
Confidence            456789999975  2 233333  3577778876653 333332  3334568999999999887643332111      


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCC--CcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEEE--EcCC-Cce
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQL--NSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLY--LAHQ-GHS  152 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~--d~~~-~~~  152 (198)
                                         .+..|++...  +.+..............+|+|||+.|+..+ .++...+|  ++.. +..
T Consensus       258 -------------------~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~  318 (428)
T PRK01029        258 -------------------FIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQS  318 (428)
T ss_pred             -------------------eEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccc
Confidence                               1112222210  122222222223345789999999887665 45654555  4432 222


Q ss_pred             eeEEeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCCcc
Q psy8758         153 RDIYHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHASEK  195 (198)
Q Consensus       153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~~~  195 (198)
                      ...+ ..+...+....|||||+.|+..+.+   ..|++||+.+++.
T Consensus       319 ~~~l-t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~  363 (428)
T PRK01029        319 PRLL-TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD  363 (428)
T ss_pred             eEEe-ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe
Confidence            2222 2333566788999999988866433   4699999988764

>KOG4497|consensus

Probab=99.45  E-value=1.9e-12  Score=89.24  Aligned_cols=140  Identities=14%  Similarity=0.202  Sum_probs=106.0

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH   85 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~   85 (198)
                      -+.|||+|+++|+.+.- .+-|=|.++-+..+.+..   -..|.-+.|..+..+++.+...++.|.+|++.+.       
T Consensus        13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c---ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qp-------   81 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC---LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQP-------   81 (447)
T ss_pred             ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH---HHHhhheeeeccceeeeeeeeccceEEEEEeecc-------
Confidence            36799999999999765 677777766554443333   2457788999999999888777888888887763       


Q ss_pred             cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-EeecCCcEEEEEcCCCceeeEEeccCcccE
Q psy8758          86 KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQHV  164 (198)
Q Consensus        86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v  164 (198)
                                             +-...+...+.++.+++|||||+.++ +...+-.|.+|.+.+.+....-...  ..+
T Consensus        82 -----------------------ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK--~~~  136 (447)
T KOG4497|consen   82 -----------------------EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPK--TNV  136 (447)
T ss_pred             -----------------------eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccc--cCc
Confidence                                   44455666778899999999997554 5566899999999998776654344  456


Q ss_pred             EEEEEcCCCCEEEEecC
Q psy8758         165 THTVWSLDNKFVISASD  181 (198)
Q Consensus       165 ~~~~~s~~~~~l~~~~~  181 (198)
                      ..++|+|||++.+.++.
T Consensus       137 kg~~f~~dg~f~ai~sR  153 (447)
T KOG4497|consen  137 KGYAFHPDGQFCAILSR  153 (447)
T ss_pred             eeEEECCCCceeeeeec
Confidence            88999999999876653

>KOG2315|consensus

Probab=99.45  E-value=3.1e-11  Score=88.31  Aligned_cols=147  Identities=12%  Similarity=0.288  Sum_probs=102.3

Q ss_pred             EEEECCCCce-EE--EeeCC---------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEE-ecCCccEEE
Q psy8758           6 HTVWSLDNKF-VI--SASDE---------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTA-ANEDFNLYS   72 (198)
Q Consensus         6 ~~~~s~~~~~-l~--~~~~d---------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~d~~i~~   72 (198)
                      .+.|++-|+- |+  +..-|         .++++++++.......+   ...++|.++.|+|+++.++++ |-.-..+.+
T Consensus       222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L---~k~GPVhdv~W~~s~~EF~VvyGfMPAkvti  298 (566)
T KOG2315|consen  222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL---LKEGPVHDVTWSPSGREFAVVYGFMPAKVTI  298 (566)
T ss_pred             EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec---CCCCCceEEEECCCCCEEEEEEecccceEEE
Confidence            4678887762 22  22222         36777777633332233   247899999999999876654 333445555


Q ss_pred             EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCC
Q psy8758          73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQ  149 (198)
Q Consensus        73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~  149 (198)
                      +|++                               +.++..+.  .++-+++-|+|.|++++.++-   -|.+.|||+.+
T Consensus       299 fnlr-------------------------------~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n  345 (566)
T KOG2315|consen  299 FNLR-------------------------------GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN  345 (566)
T ss_pred             EcCC-------------------------------CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence            5554                               46666654  566788999999999988765   47999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecC------CCeEEEEecC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASD------EMNLRVWKAH  191 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~v~~w~~~  191 (198)
                      .+++..+..   ..-+-..|+|||++++|+..      |+.++||+..
T Consensus       346 ~K~i~~~~a---~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt  390 (566)
T KOG2315|consen  346 RKLIAKFKA---ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT  390 (566)
T ss_pred             hhhcccccc---CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence            877776632   34556799999999998753      7889999984

>KOG0280|consensus

Probab=99.45  E-value=3.4e-12  Score=86.56  Aligned_cols=154  Identities=14%  Similarity=0.077  Sum_probs=107.0

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceee--eeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLG--PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .++.|++.+..++++..+|.+.+-+........  ..+.  |.-+.....|+...+.++.+|++|+.+..||+|.+    
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~--He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p----  198 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKV--HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIP----  198 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccc--cceeeeeeecccCCCceEEecCCCceEEEEEecCC----
Confidence            467888888889888888888855443332222  2332  45667778888877788888888888888887743    


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceee-ecCCCcceEEEEEccC-CCEEEEeecCCcEEEEEcCC-CceeeEEecc
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQ-GHSRDIYHTK  159 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~-~~~~~~~~~~  159 (198)
                                               .+.+.. .+.|...|.+|.-+|. +.++++|++|-.|++||.+. ++++...  .
T Consensus       199 -------------------------~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~--~  251 (339)
T KOG0280|consen  199 -------------------------KTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA--K  251 (339)
T ss_pred             -------------------------cceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC--c
Confidence                                     333333 4558888999988874 67999999999999999995 6666554  3


Q ss_pred             CcccEEEEEEcCCC--CEEEEecCCCeEEEEecCC
Q psy8758         160 RMQHVTHTVWSLDN--KFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       160 ~~~~v~~~~~s~~~--~~l~~~~~dg~v~~w~~~~  192 (198)
                      -.+.|+.+.++|.-  +.|+++-.+| .+|-+.+.
T Consensus       252 v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~  285 (339)
T KOG0280|consen  252 VGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSD  285 (339)
T ss_pred             cccceEEEEecchhhhHHHHHHHhcC-ceEEEecc
Confidence            34899999999953  3444444333 55555443

>KOG1310|consensus

Probab=99.42  E-value=1.8e-12  Score=94.83  Aligned_cols=119  Identities=18%  Similarity=0.243  Sum_probs=96.4

Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceE
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVT  122 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~  122 (198)
                      |.+.|+++.|+.+|.+|++ |++|-.+.+||.-.                              .+++..+ ++|...|.
T Consensus        49 H~GCVN~LeWn~dG~lL~S-GSDD~r~ivWd~~~------------------------------~KllhsI~TgHtaNIF   97 (758)
T KOG1310|consen   49 HTGCVNCLEWNADGELLAS-GSDDTRLIVWDPFE------------------------------YKLLHSISTGHTANIF   97 (758)
T ss_pred             ccceecceeecCCCCEEee-cCCcceEEeecchh------------------------------cceeeeeeccccccee
Confidence            6889999999999998875 78888888888764                              3555554 68999999


Q ss_pred             EEEEccC--CCEEEEeecCCcEEEEEcCCCce---------eeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEec
Q psy8758         123 SVDYSPT--GREFVAGGYDKSLRLYLAHQGHS---------RDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKA  190 (198)
Q Consensus       123 ~~~~sp~--~~~l~~~~~d~~v~v~d~~~~~~---------~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~  190 (198)
                      ++.|-|.  .+.+++|..|..|++||+...+.         ......-|...|..++-.|++ ..+.++++||+++-+|+
T Consensus        98 svKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDi  177 (758)
T KOG1310|consen   98 SVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDI  177 (758)
T ss_pred             EEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecc
Confidence            9999995  56889999999999999985221         111234577889999999988 67889999999999999


Q ss_pred             CCC
Q psy8758         191 HAS  193 (198)
Q Consensus       191 ~~~  193 (198)
                      +..
T Consensus       178 REp  180 (758)
T KOG1310|consen  178 REP  180 (758)
T ss_pred             cCC
Confidence            864

>KOG3881|consensus

Probab=99.42  E-value=2.4e-11  Score=85.34  Aligned_cols=192  Identities=11%  Similarity=0.109  Sum_probs=131.2

Q ss_pred             ceeEEEECCCCc--eEEEeeCCCeEEEEEccCCceeeee----eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNK--FVISASDEMNLRVWKAHASEKLGPI----RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~--~l~~~~~d~~i~i~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .|..++|..+++  .+...+.+..+..+.+........+    ..+....+|..++..  +..+++ |-.+|.+.+|...
T Consensus        57 ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Lit-c~~sG~l~~~~~k  133 (412)
T KOG3881|consen   57 RISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLIT-CVSSGNLQVRHDK  133 (412)
T ss_pred             hhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEE-EecCCcEEEEecc
Confidence            466777776554  4444445666777777655443333    111234445555443  234444 3578999999987


Q ss_pred             CCC------Cccc-----------cccCceEEEecCC--CcEEEEEccCCCcceeeecCC---------CcceEEEEEcc
Q psy8758          77 QLN------SPLN-----------VHKDMTSAAANED--FNLYSYDIRQLNSPLNVHKDM---------TSAVTSVDYSP  128 (198)
Q Consensus        77 ~~~------~~~~-----------~~~~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~---------~~~i~~~~~sp  128 (198)
                      ...      ..+.           .....++++|+..  ..+.+||+++. +++..-+..         +-+++++.|-|
T Consensus       134 ~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~-~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~  212 (412)
T KOG3881|consen  134 SGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS-KQIWSAKNVPNDRLGLRVPVWITDIRFLE  212 (412)
T ss_pred             CCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccc-eeeeeccCCCCccccceeeeeeccceecC
Confidence            322      1111           1223567789998  88999999983 555444322         23477888988


Q ss_pred             C--CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccccC
Q psy8758         129 T--GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH  198 (198)
Q Consensus       129 ~--~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~~  198 (198)
                      .  ...|++++.-+.+++||.+.++...........+++++...|++++++++..-+.+..||+++++.+++
T Consensus       213 g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~  284 (412)
T KOG3881|consen  213 GSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGC  284 (412)
T ss_pred             CCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeecc
Confidence            7  789999999999999999976543333244567999999999999999999999999999999988764

>KOG0974|consensus

Probab=99.41  E-value=1.7e-11  Score=95.24  Aligned_cols=150  Identities=17%  Similarity=0.161  Sum_probs=103.3

Q ss_pred             ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee--cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccccc
Q psy8758           9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM--SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHK   86 (198)
Q Consensus         9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~   86 (198)
                      +.-+...++.+..++.+-+||...+.....+.....  -....-+.++++.-+                           
T Consensus        95 l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~---------------------------  147 (967)
T KOG0974|consen   95 LFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELY---------------------------  147 (967)
T ss_pred             hhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEE---------------------------
Confidence            344556777777788888888765543333322100  000111122332222                           


Q ss_pred             CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEE
Q psy8758          87 DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH  166 (198)
Q Consensus        87 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~  166 (198)
                         +++|+.-+.|.+|+......+. .+.+|.+.+.++.|+-||+++++.++|.++|+|++.+.+......-+|...|+.
T Consensus       148 ---i~~gsv~~~iivW~~~~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~  223 (967)
T KOG0974|consen  148 ---IASGSVFGEIIVWKPHEDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA  223 (967)
T ss_pred             ---EEeccccccEEEEeccccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE
Confidence               3334444445555544323343 678999999999999999999999999999999999988776444689999999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         167 TVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       167 ~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +.|.|+  .+++++.|-+.++|+.+
T Consensus       224 ~~~~~n--~i~t~gedctcrvW~~~  246 (967)
T KOG0974|consen  224 CCFLPN--RIITVGEDCTCRVWGVN  246 (967)
T ss_pred             EEeccc--eeEEeccceEEEEEecc
Confidence            999998  89999999999999664

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.41  E-value=4e-09  Score=76.78  Aligned_cols=188  Identities=13%  Similarity=0.149  Sum_probs=123.2

Q ss_pred             eeEEEECCCCceEEEeeC----CCeEEEEEccCC-ceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           4 VTHTVWSLDNKFVISASD----EMNLRVWKAHAS-EKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~----d~~i~i~~~~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ..-++++|++++|++...    ++.|..|++... ..+..+.... .......++++|++++++++...++.+.++++..
T Consensus        39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~  118 (345)
T PF10282_consen   39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD  118 (345)
T ss_dssp             ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence            456889999999998876    579999998764 3444444443 3455678999999999999877799999999865


Q ss_pred             CCCc------c-------------ccc---------cCceEEEecCCCcEEEEEccCCCcceee---e-cCCCcceEEEE
Q psy8758          78 LNSP------L-------------NVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNV---H-KDMTSAVTSVD  125 (198)
Q Consensus        78 ~~~~------~-------------~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~-~~~~~~i~~~~  125 (198)
                      ....      +             ..|         ...++++.-....|.+|++......+..   + .......+.++
T Consensus       119 ~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~  198 (345)
T PF10282_consen  119 DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLA  198 (345)
T ss_dssp             TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEE
T ss_pred             CcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEE
Confidence            3110      0             000         1123444555667888888763322321   2 23345678999


Q ss_pred             EccCCCEEEEee-cCCcEEEEEcC--CCcee--eEEec---cC--cccEEEEEEcCCCCEEEEec-CCCeEEEEecC
Q psy8758         126 YSPTGREFVAGG-YDKSLRLYLAH--QGHSR--DIYHT---KR--MQHVTHTVWSLDNKFVISAS-DEMNLRVWKAH  191 (198)
Q Consensus       126 ~sp~~~~l~~~~-~d~~v~v~d~~--~~~~~--~~~~~---~~--~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~  191 (198)
                      |+|+++++.+.. .++.|.++++.  .+...  .....   +.  ......++++|||++|+++. .++.|.+|+++
T Consensus       199 f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d  275 (345)
T PF10282_consen  199 FSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLD  275 (345)
T ss_dssp             E-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred             EcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence            999999886655 47889999998  44322  22211   11  12578899999999887654 57889999993

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.40  E-value=5.8e-10  Score=81.41  Aligned_cols=179  Identities=12%  Similarity=0.106  Sum_probs=117.0

Q ss_pred             ceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc----------
Q psy8758          14 KFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL----------   82 (198)
Q Consensus        14 ~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~----------   82 (198)
                      ++++ +-..++.|.+.|..+.+....+...  ...-..+.|+||+++++++ +.|+.+.++|+.+.+..-          
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~--~~~h~~~~~s~Dgr~~yv~-~rdg~vsviD~~~~~~v~~i~~G~~~~~   82 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTG--GAPHAGLKFSPDGRYLYVA-NRDGTVSVIDLATGKVVATIKVGGNPRG   82 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-S--TTEEEEEE-TT-SSEEEEE-ETTSEEEEEETTSSSEEEEEE-SSEEEE
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCC--CCceeEEEecCCCCEEEEE-cCCCeEEEEECCcccEEEEEecCCCcce
Confidence            4444 4557899999999888776666542  1222457899999999887 589999999998776321          


Q ss_pred             ---ccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec-CCcEEEEEcCCCc
Q psy8758          83 ---NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGH  151 (198)
Q Consensus        83 ---~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~~  151 (198)
                         ......++++....+.+.++|.++ .++++.+...       ...+..+.-+|....++..-. .+.|.+.|....+
T Consensus        83 i~~s~DG~~~~v~n~~~~~v~v~D~~t-le~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~  161 (369)
T PF02239_consen   83 IAVSPDGKYVYVANYEPGTVSVIDAET-LEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPK  161 (369)
T ss_dssp             EEE--TTTEEEEEEEETTEEEEEETTT---EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSS
T ss_pred             EEEcCCCCEEEEEecCCCceeEecccc-ccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccc
Confidence               111223455667889999999988 5777766432       345678888898886665554 4888888987765


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEEE-ecCCCeEEEEecCCCccc
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVIS-ASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~v~~w~~~~~~~~  196 (198)
                      .+...............|+|++++++. ...++.|.++|.++++.+
T Consensus       162 ~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v  207 (369)
T PF02239_consen  162 NLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLV  207 (369)
T ss_dssp             CEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             ccceeeecccccccccccCcccceeeecccccceeEEEeeccceEE
Confidence            443322233356788999999998765 456778999999887654

...

>KOG1409|consensus

Probab=99.40  E-value=3.4e-11  Score=83.47  Aligned_cols=189  Identities=13%  Similarity=0.212  Sum_probs=136.0

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      |++...-|...-+++.+.|.++++|--. .++.-..+ .+....+++++.+.++...|++ |-..|++.-+.+...-.  
T Consensus        27 vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI-~~~mP~~~~~~~y~~e~~~L~v-g~~ngtvtefs~sedfnkm  104 (404)
T KOG1409|consen   27 VNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSI-YHYMPSPCSAMEYVSESRRLYV-GQDNGTVTEFALSEDFNKM  104 (404)
T ss_pred             hhhheeccCCCCeEEccccceeeeEEeccccccCchh-hhhCCCCceEeeeeccceEEEE-EEecceEEEEEhhhhhhhc
Confidence            4455555666778899999999999644 33322222 2345677888899888777765 56778877665532110  


Q ss_pred             ----ccccccC--------------------------------------------------ceEEEecCCCcEEEEEccC
Q psy8758          81 ----PLNVHKD--------------------------------------------------MTSAAANEDFNLYSYDIRQ  106 (198)
Q Consensus        81 ----~~~~~~~--------------------------------------------------~~~~~~~~~~~i~~~d~~~  106 (198)
                          ....|..                                                  .+...|...|++....+..
T Consensus       105 ~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~  184 (404)
T KOG1409|consen  105 TFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQ  184 (404)
T ss_pred             chhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEee
Confidence                0000100                                                  1234555666666665543


Q ss_pred             C-CcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758         107 L-NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       107 ~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v  185 (198)
                      . -.++..+.+|...+.+++|.|..+.|.+|..|..+.+||+.-.+-......+|...|..+...+--+.+.+++.||.|
T Consensus       185 ~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i  264 (404)
T KOG1409|consen  185 NGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGI  264 (404)
T ss_pred             cCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeE
Confidence            2 356778889999999999999999999999999999999987766666667898999999888888899999999999


Q ss_pred             EEEecCCCc
Q psy8758         186 RVWKAHASE  194 (198)
Q Consensus       186 ~~w~~~~~~  194 (198)
                      .+||++...
T Consensus       265 ~~w~mn~~r  273 (404)
T KOG1409|consen  265 VVWNMNVKR  273 (404)
T ss_pred             EEEecccee
Confidence            999997644

>KOG0650|consensus

Probab=99.39  E-value=8e-12  Score=92.18  Aligned_cols=140  Identities=17%  Similarity=0.264  Sum_probs=109.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|.++.|+|...+|++++.. .|+|||+...+.++.+...  ...+..++.+|.|..++. |+.|+.++.+|+.-...+
T Consensus       567 G~vq~v~FHPs~p~lfVaTq~-~vRiYdL~kqelvKkL~tg--~kwiS~msihp~GDnli~-gs~d~k~~WfDldlsskP  642 (733)
T KOG0650|consen  567 GLVQRVKFHPSKPYLFVATQR-SVRIYDLSKQELVKKLLTG--SKWISSMSIHPNGDNLIL-GSYDKKMCWFDLDLSSKP  642 (733)
T ss_pred             CceeEEEecCCCceEEEEecc-ceEEEehhHHHHHHHHhcC--CeeeeeeeecCCCCeEEE-ecCCCeeEEEEcccCcch
Confidence            468899999999988888754 7999999876665555543  556889999999999987 579999999999754332


Q ss_pred             -------------cccccC-ceEEEecCCCcEEEEE------ccC--CCcceeeecCCCcc----eEEEEEccCCCEEEE
Q psy8758          82 -------------LNVHKD-MTSAAANEDFNLYSYD------IRQ--LNSPLNVHKDMTSA----VTSVDYSPTGREFVA  135 (198)
Q Consensus        82 -------------~~~~~~-~~~~~~~~~~~i~~~d------~~~--~~~~~~~~~~~~~~----i~~~~~sp~~~~l~~  135 (198)
                                   +..|.. +++++|+.||++.++-      +-+  .--+++.+.+|...    |....|+|...+|++
T Consensus       643 yk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfs  722 (733)
T KOG0650|consen  643 YKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFS  722 (733)
T ss_pred             hHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEe
Confidence                         222322 5789999999998874      221  12456777788665    888899999999999


Q ss_pred             eecCCcEEEE
Q psy8758         136 GGYDKSLRLY  145 (198)
Q Consensus       136 ~~~d~~v~v~  145 (198)
                      ++.||+|++|
T Consensus       723 AGAd~tirlf  732 (733)
T KOG0650|consen  723 AGADGTIRLF  732 (733)
T ss_pred             cCCCceEEee
Confidence            9999999998

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.39  E-value=7.8e-10  Score=90.42  Aligned_cols=191  Identities=13%  Similarity=0.166  Sum_probs=127.1

Q ss_pred             eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeee---------------ecCceeeEEeCCCCCeEEEEecCC
Q psy8758           4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVV---------------MSLRSNMVSWNPMEAFVFTAANED   67 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~~~~~~~d   67 (198)
                      -..++++++++.|+++. ..+.|+++|+.++. +..+....               .-.....++|+|++..++++...+
T Consensus       626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~  704 (1057)
T PLN02919        626 PQGLAYNAKKNLLYVADTENHALREIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ  704 (1057)
T ss_pred             CcEEEEeCCCCEEEEEeCCCceEEEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence            46788999888766654 45678999986654 22221100               011235789999777777776778


Q ss_pred             ccEEEEeccCCCCc----------------------------cccccCceEEEecCCCcEEEEEccCCCcceee------
Q psy8758          68 FNLYSYDIRQLNSP----------------------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNV------  113 (198)
Q Consensus        68 ~~i~~~d~~~~~~~----------------------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~------  113 (198)
                      +.|++||.......                            +....+.++++-..++.|++||+.+....+..      
T Consensus       705 ~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~  784 (1057)
T PLN02919        705 HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTF  784 (1057)
T ss_pred             CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEeccccc
Confidence            89999987543210                            00111235666777889999998762211100      


Q ss_pred             ------ecC--------CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc------------CcccEEEE
Q psy8758         114 ------HKD--------MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK------------RMQHVTHT  167 (198)
Q Consensus       114 ------~~~--------~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~------------~~~~v~~~  167 (198)
                            +..        .-.....++++|+|+.+++-..++.|++||..++........+            .-.....+
T Consensus       785 ~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GI  864 (1057)
T PLN02919        785 SDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGL  864 (1057)
T ss_pred             CcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEE
Confidence                  000        0112468999999998888889999999999887665443211            11357789


Q ss_pred             EEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         168 VWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       168 ~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +++++|+.+++-+.++.|++||+++++.
T Consensus       865 avd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        865 ALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             EEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            9999999888888999999999998764

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=1.5e-10  Score=86.77  Aligned_cols=153  Identities=10%  Similarity=0.080  Sum_probs=94.2

Q ss_pred             eeEEEECCCCceEEE-eeCCC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEeccCC
Q psy8758           4 VTHTVWSLDNKFVIS-ASDEM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIRQL   78 (198)
Q Consensus         4 v~~~~~s~~~~~l~~-~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~~~   78 (198)
                      +...+|+|||+.|+. .+.++  .|.++|+.+++. ..+..  +........|+|+++.++.+...++.  |+++++.. 
T Consensus       245 ~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~--~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~-  320 (430)
T PRK00178        245 NGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTN--HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG-  320 (430)
T ss_pred             cCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEccc--CCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC-
Confidence            446899999998774 44444  578889887653 23322  23345678899999998876544332  44444332 


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC-C--cEEEEEcCCCceeeE
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-K--SLRLYLAHQGHSRDI  155 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d-~--~v~v~d~~~~~~~~~  155 (198)
                                                   ++. ..+..........+|+|||++++..+.+ +  .|.++|+.+++....
T Consensus       321 -----------------------------g~~-~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~l  370 (430)
T PRK00178        321 -----------------------------GRA-ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRIL  370 (430)
T ss_pred             -----------------------------CCE-EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEc
Confidence                                         121 1121111223457899999998877653 2  588899988776443


Q ss_pred             EeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCC
Q psy8758         156 YHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHAS  193 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~  193 (198)
                      .. .  .......|+|||+.++..+.+   ..+.+.+++.+
T Consensus       371 t~-~--~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~  408 (430)
T PRK00178        371 TD-T--SLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGR  408 (430)
T ss_pred             cC-C--CCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            32 2  122356899999988766543   34677777543

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.38  E-value=1.2e-10  Score=86.98  Aligned_cols=152  Identities=11%  Similarity=0.087  Sum_probs=96.3

Q ss_pred             ceeEEEECCCCceEEE-eeCCC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVIS-ASDEM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~-~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~   77 (198)
                      .+.+++|+|||+.|+. .+.++  .|++|++.++.. ..+..  +........|+|+++.++.+...++  .|+++|+..
T Consensus       235 ~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~--~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~  311 (417)
T TIGR02800       235 MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTN--GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG  311 (417)
T ss_pred             CccceEECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCC--CCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            3557899999987764 44443  588888876643 23322  2233456789999999887654333  344444332


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC---cEEEEEcCCCceee
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK---SLRLYLAHQGHSRD  154 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~---~v~v~d~~~~~~~~  154 (198)
                                                    ++ ...+..+......+.|+|+|++++.++.++   .|.+||+.++....
T Consensus       312 ------------------------------~~-~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~  360 (417)
T TIGR02800       312 ------------------------------GE-VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERV  360 (417)
T ss_pred             ------------------------------CC-EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEE
Confidence                                          22 233333445567789999999999888765   78999998865433


Q ss_pred             EEeccCcccEEEEEEcCCCCEEEEecCCC---eEEEEecC
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFVISASDEM---NLRVWKAH  191 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~v~~w~~~  191 (198)
                      .. ..  .......|+|||++|+..+.++   .+++.+..
T Consensus       361 l~-~~--~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       361 LT-DT--GLDESPSFAPNGRMILYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             cc-CC--CCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence            32 11  2345568999999888765543   45555543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG1538|consensus

Probab=99.37  E-value=7.2e-12  Score=93.84  Aligned_cols=113  Identities=19%  Similarity=0.288  Sum_probs=76.2

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEE
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  126 (198)
                      .|..++|.|||..++.++  +..+.+||...                              +..+.++++|++.|.+++|
T Consensus        14 ci~d~afkPDGsqL~lAA--g~rlliyD~nd------------------------------G~llqtLKgHKDtVycVAy   61 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAA--GSRLLVYDTSD------------------------------GTLLQPLKGHKDTVYCVAY   61 (1081)
T ss_pred             chheeEECCCCceEEEec--CCEEEEEeCCC------------------------------cccccccccccceEEEEEE
Confidence            688999999999998763  56788888765                              4555556666666666666


Q ss_pred             ccCCCEEEEeecCCcEEEEEcCCCceeeE------------------------------------EeccCcccEEEEEEc
Q psy8758         127 SPTGREFVAGGYDKSLRLYLAHQGHSRDI------------------------------------YHTKRMQHVTHTVWS  170 (198)
Q Consensus       127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~------------------------------------~~~~~~~~v~~~~~s  170 (198)
                      +.||+.+++|+.|..|.+|+.+-...+..                                    ........+.+.+|.
T Consensus        62 s~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWt  141 (1081)
T KOG1538|consen   62 AKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWT  141 (1081)
T ss_pred             ccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeec
Confidence            66666666666666666665432111000                                    000123578889999


Q ss_pred             CCCCEEEEecCCCeEEEEecC
Q psy8758         171 LDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       171 ~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .||++++.|-.||+|.+-+-.
T Consensus       142 nDGqylalG~~nGTIsiRNk~  162 (1081)
T KOG1538|consen  142 NDGQYLALGMFNGTISIRNKN  162 (1081)
T ss_pred             CCCcEEEEeccCceEEeecCC
Confidence            999999999999999887653

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.37  E-value=5.2e-10  Score=83.04  Aligned_cols=156  Identities=10%  Similarity=0.091  Sum_probs=98.1

Q ss_pred             eeEEEECCCCce-EEEeeC---CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           4 VTHTVWSLDNKF-VISASD---EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         4 v~~~~~s~~~~~-l~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .....|+|||+. ++..+.   +..|.++|+.+++. ..+..  ..+......|+||++.++.+.+.++           
T Consensus       190 ~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~-~~lt~--~~g~~~~~~~SPDG~~la~~~~~~g-----------  255 (419)
T PRK04043        190 NIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK-EKIAS--SQGMLVVSDVSKDGSKLLLTMAPKG-----------  255 (419)
T ss_pred             eEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE-EEEec--CCCcEEeeEECCCCCEEEEEEccCC-----------
Confidence            457899999985 554433   35688889877753 33322  2344556789999998887654332           


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CC--cEEEEEcCCCceeeEE
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DK--SLRLYLAHQGHSRDIY  156 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~--~v~v~d~~~~~~~~~~  156 (198)
                                      +..|+++|+..  .....++.+........|+|||+.|+..+. .+  .|.+.|+.+++.....
T Consensus       256 ----------------~~~Iy~~dl~~--g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt  317 (419)
T PRK04043        256 ----------------QPDIYLYDTNT--KTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVV  317 (419)
T ss_pred             ----------------CcEEEEEECCC--CcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCc
Confidence                            12344444433  223444444433445689999997776653 23  6888888887775544


Q ss_pred             eccCcccEEEEEEcCCCCEEEEecCC---------CeEEEEecCCCcc
Q psy8758         157 HTKRMQHVTHTVWSLDNKFVISASDE---------MNLRVWKAHASEK  195 (198)
Q Consensus       157 ~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~v~~w~~~~~~~  195 (198)
                      ..+.    ....|||||+.|+..+..         ..|.+.|+.+++.
T Consensus       318 ~~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~  361 (419)
T PRK04043        318 FHGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI  361 (419)
T ss_pred             cCCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe
Confidence            2221    124899999988765433         3688888877753

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.35  E-value=3.4e-10  Score=84.99  Aligned_cols=153  Identities=11%  Similarity=0.061  Sum_probs=90.8

Q ss_pred             eeEEEECCCCceEEE-eeCCCe--EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           4 VTHTVWSLDNKFVIS-ASDEMN--LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~-~~~d~~--i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ....+|+|||+.|+. .+.++.  |.++|+.+++. ..+..  +........|+|+++.++.+...++...         
T Consensus       264 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~--~~~~~~~p~wSpDG~~I~f~s~~~g~~~---------  331 (448)
T PRK04792        264 NGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITR--HRAIDTEPSWHPDGKSLIFTSERGGKPQ---------  331 (448)
T ss_pred             cCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECcc--CCCCccceEECCCCCEEEEEECCCCCce---------
Confidence            346789999997765 455664  77778876653 33322  2334567899999999987754443322         


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC-C--cEEEEEcCCCceeeEEe
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-K--SLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d-~--~v~v~d~~~~~~~~~~~  157 (198)
                                        |+++|+.+ ++. ..+..........+|+|||++++..+.+ +  .|.++|+.+++..... 
T Consensus       332 ------------------Iy~~dl~~-g~~-~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt-  390 (448)
T PRK04792        332 ------------------IYRVNLAS-GKV-SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLT-  390 (448)
T ss_pred             ------------------EEEEECCC-CCE-EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEcc-
Confidence                              22233322 222 2222112223456899999988876553 3  4666788777654332 


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecC-CC--eEEEEecC
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASD-EM--NLRVWKAH  191 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~-dg--~v~~w~~~  191 (198)
                      ..  .......|+|||+.|+..+. ++  .+++++.+
T Consensus       391 ~~--~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~  425 (448)
T PRK04792        391 ST--RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID  425 (448)
T ss_pred             CC--CCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence            22  12235589999998776543 33  36777764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.34  E-value=1.2e-09  Score=79.20  Aligned_cols=180  Identities=12%  Similarity=0.117  Sum_probs=124.1

Q ss_pred             CCCCceEEEeeCCCeEEEEEccCCceeeeeeee-e------ecCcee---eEE-eCC-CCCeEEEEecCCccEEEEeccC
Q psy8758          10 SLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-V------MSLRSN---MVS-WNP-MEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus        10 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~------~~~~v~---~~~-~~~-~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.||+.++- +..|.|.+||..+... ..+..- +      ....+.   -+. |++ +|.+++.+  ..|...+.+...
T Consensus       275 nsDGkrIvF-q~~GdIylydP~td~l-ekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~V--SRGkaFi~~~~~  350 (668)
T COG4946         275 NSDGKRIVF-QNAGDIYLYDPETDSL-EKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALV--SRGKAFIMRPWD  350 (668)
T ss_pred             CCCCcEEEE-ecCCcEEEeCCCcCcc-eeeecCCccccccccccccCHHHhhhhhccCCCcEEEEE--ecCcEEEECCCC
Confidence            567877664 3567899999876542 222110 0      011111   111 333 46666655  356777766543


Q ss_pred             CCCcccccc-----------CceEEEecCCC-cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          78 LNSPLNVHK-----------DMTSAAANEDF-NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        78 ~~~~~~~~~-----------~~~~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                      .-....++.           ..-++.|..|| .+-++|.+.  ...+.++..-+.|.++..+|+|++++.+.....+.++
T Consensus       351 ~~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~--~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vi  428 (668)
T COG4946         351 GYSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDG--GEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVI  428 (668)
T ss_pred             CeeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCC--ceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEE
Confidence            322222222           12477888888 899999986  5566777778899999999999999999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC----eEEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM----NLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~v~~w~~~~~~~~  196 (198)
                      |+.++.....- ....+-|+.+.|||+++++|-+-.+|    .|+++|+.+++..
T Consensus       429 didngnv~~id-kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy  482 (668)
T COG4946         429 DIDNGNVRLID-KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIY  482 (668)
T ss_pred             EecCCCeeEec-ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEE
Confidence            99999876543 45567899999999999999886665    5899999887753

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.30  E-value=1.3e-08  Score=71.28  Aligned_cols=187  Identities=13%  Similarity=0.158  Sum_probs=126.0

Q ss_pred             eEEEECCCCceEEEee-CCCeEEEEEccC-CceeeeeeeeeecCc----------eeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           5 THTVWSLDNKFVISAS-DEMNLRVWKAHA-SEKLGPIRKVVMSLR----------SNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~-~d~~i~i~~~~~-~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      .-++++++|++++++. ..|.|.++.+++ |.....+....|.+.          +-...+.|++++++++.-....|.+
T Consensus        92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~  171 (346)
T COG2706          92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFL  171 (346)
T ss_pred             eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEE
Confidence            5688999999998886 458899999865 433333333334444          6788899999999887544567899


Q ss_pred             EeccCCCCc-----------------cccccCceEEEecCCCcEEEEEccCCCcceeeec---------CCCcceEEEEE
Q psy8758          73 YDIRQLNSP-----------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK---------DMTSAVTSVDY  126 (198)
Q Consensus        73 ~d~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---------~~~~~i~~~~~  126 (198)
                      |++...+-.                 +..+.....+..--+++|.+|........+..+.         ........|..
T Consensus       172 y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhi  251 (346)
T COG2706         172 YDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHI  251 (346)
T ss_pred             EEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEE
Confidence            998743311                 1122223466777889999998876323332221         12345778999


Q ss_pred             ccCCCEEEEeec-CCcEEEEEcCC--CceeeEE-eccCcccEEEEEEcCCCCEEEEecCC-CeEEEEecC
Q psy8758         127 SPTGREFVAGGY-DKSLRLYLAHQ--GHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDE-MNLRVWKAH  191 (198)
Q Consensus       127 sp~~~~l~~~~~-d~~v~v~d~~~--~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d-g~v~~w~~~  191 (198)
                      +|||++|.++.. ...|.+|.+..  +++.... ...+....+...|+|+|++|+++..+ ..|.+|..+
T Consensus       252 s~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d  321 (346)
T COG2706         252 SPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERD  321 (346)
T ss_pred             CCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence            999999988864 45788888765  3332221 23344558899999999998887654 568888664

>KOG1354|consensus

Probab=99.30  E-value=1.6e-10  Score=80.31  Aligned_cols=188  Identities=13%  Similarity=0.269  Sum_probs=120.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCce-----eeeeeee----------eecCceeeEEeCCCCCe-EEEEecC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK-----LGPIRKV----------VMSLRSNMVSWNPMEAF-VFTAANE   66 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~-----~~~~~~~----------~~~~~v~~~~~~~~~~~-~~~~~~~   66 (198)
                      -|.++.|...|++||+|..+|.|-++.-.....     ...++.+          .....|..+.|.+++.. .+.....
T Consensus        27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstN  106 (433)
T KOG1354|consen   27 IISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTN  106 (433)
T ss_pred             ceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecC
Confidence            478999999999999999999999986532221     1111111          12346788999886542 2223358


Q ss_pred             CccEEEEeccCCCCcc----------------------ccccC--------------------------ceEEEecCCCc
Q psy8758          67 DFNLYSYDIRQLNSPL----------------------NVHKD--------------------------MTSAAANEDFN   98 (198)
Q Consensus        67 d~~i~~~d~~~~~~~~----------------------~~~~~--------------------------~~~~~~~~~~~   98 (198)
                      |.+|++|.+.......                      ..+..                          .-.....+|-.
T Consensus       107 dktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLR  186 (433)
T KOG1354|consen  107 DKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADDLR  186 (433)
T ss_pred             CcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecccee
Confidence            9999999986432211                      00100                          11233445667


Q ss_pred             EEEEEccCCCcceee--ecCC-----CcceEEEEEccC-CCEEEEeecCCcEEEEEcCCCcee----eEEe---------
Q psy8758          99 LYSYDIRQLNSPLNV--HKDM-----TSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGHSR----DIYH---------  157 (198)
Q Consensus        99 i~~~d~~~~~~~~~~--~~~~-----~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~~~~~----~~~~---------  157 (198)
                      |.+|.++-..+....  ++++     ..-|++..|+|. -..++.++..|+|++.|++...+-    ..+.         
T Consensus       187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rs  266 (433)
T KOG1354|consen  187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRS  266 (433)
T ss_pred             eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchh
Confidence            889998753333322  2333     234889999997 457888888999999999953221    0110         


Q ss_pred             --ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         158 --TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       158 --~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                        ..--..|..+.|+++|+++++-.. -+|++||++
T Consensus       267 ffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~n  301 (433)
T KOG1354|consen  267 FFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLN  301 (433)
T ss_pred             hHHHHhhhhhceEEccCCcEEEEecc-ceeEEEecc
Confidence              111246889999999999987643 689999994

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.27  E-value=5.4e-09  Score=73.20  Aligned_cols=168  Identities=16%  Similarity=0.192  Sum_probs=113.4

Q ss_pred             cceeEEEECCCCceEEEeeC---CCeEEEEEccC--Cceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISASD---EMNLRVWKAHA--SEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      +..+=++|+|+++.|+++..   +|.|..|.++.  |+ +..+.... ...+.+.+++++++++++++.-..|.|.++-+
T Consensus        40 ~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~  118 (346)
T COG2706          40 GNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGR-LTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPL  118 (346)
T ss_pred             CCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCe-EEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEc
Confidence            45677999999999988854   57788887764  44 23332222 23344889999999999998767788998888


Q ss_pred             cCCCCccccccCceEEEecCCCcEEE-----EEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCC
Q psy8758          76 RQLNSPLNVHKDMTSAAANEDFNLYS-----YDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQ  149 (198)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~i~~-----~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~  149 (198)
                      +..                  |.+.-     .+..  ..+-  .......+....+.|++++|++... --.|.+|++..
T Consensus       119 ~~d------------------G~l~~~v~~~~h~g--~~p~--~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~d  176 (346)
T COG2706         119 QAD------------------GSLQPVVQVVKHTG--SGPH--ERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDD  176 (346)
T ss_pred             ccC------------------CccccceeeeecCC--CCCC--ccccCCccceeeeCCCCCEEEEeecCCceEEEEEccc
Confidence            642                  11110     0000  0010  0111223678899999999988764 34699999998


Q ss_pred             CceeeEE--eccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCC
Q psy8758         150 GHSRDIY--HTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHA  192 (198)
Q Consensus       150 ~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~  192 (198)
                      +.+....  ........+.+.|+|++++....+ -+++|.+|..+.
T Consensus       177 g~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~  222 (346)
T COG2706         177 GKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP  222 (346)
T ss_pred             CccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence            7764332  123346789999999999876654 489999999876

>KOG0280|consensus

Probab=99.26  E-value=1.5e-09  Score=74.05  Aligned_cols=160  Identities=12%  Similarity=0.122  Sum_probs=103.4

Q ss_pred             eeEEEECC---CCc-eEEEeeCCCeEEEEEccCCceeeeeeeee---ec-CceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           4 VTHTVWSL---DNK-FVISASDEMNLRVWKAHASEKLGPIRKVV---MS-LRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         4 v~~~~~s~---~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~-~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      +..+.|+.   +|. .++-+..+|.|.+|..........++...   .. ....++.|++.+..++++ ..+|.+.+-+.
T Consensus        72 ~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs-~s~G~~~~v~~  150 (339)
T KOG0280|consen   72 EFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVS-DSRGSISGVYE  150 (339)
T ss_pred             cceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEE-cCCCcEEEEec
Confidence            44555543   344 34455567778877765433222222221   01 113466777777776654 45566553333


Q ss_pred             cCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEEEcC-CCcee
Q psy8758          76 RQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAH-QGHSR  153 (198)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~-~~~~~  153 (198)
                      ....                            -+..+..+.|..++.-.+|+.. .+.+.+|+.|+.+..||++ .++.+
T Consensus       151 t~~~----------------------------le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i  202 (339)
T KOG0280|consen  151 TEMV----------------------------LEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFI  202 (339)
T ss_pred             ceee----------------------------eeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCccee
Confidence            2210                            1334467789888988998765 3588899999999999999 34444


Q ss_pred             eEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCC
Q psy8758         154 DIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ..-..-|...|.++.-+| .+.++++|+.|..|++||.++
T Consensus       203 ~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn  242 (339)
T KOG0280|consen  203 WHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN  242 (339)
T ss_pred             eecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence            443456778899998887 467999999999999999985

>KOG4547|consensus

Probab=99.25  E-value=4.9e-10  Score=82.55  Aligned_cols=105  Identities=13%  Similarity=0.086  Sum_probs=90.7

Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEE
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH  166 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~  166 (198)
                      .++-|...|.|.+|++.. ++....+.  .|.+.++++.++.+-..|.+++.|+.+..|+.......... ......+.+
T Consensus        72 ~lvlgt~~g~v~~ys~~~-g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~-~~~~~~~~s  149 (541)
T KOG4547|consen   72 MLVLGTPQGSVLLYSVAG-GEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIW-KEQKPLVSS  149 (541)
T ss_pred             EEEeecCCccEEEEEecC-CeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeee-ccCCCccce
Confidence            588899999999999987 55555554  58899999999999999999999999999999998887776 455578999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         167 TVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       167 ~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ++.+|||..+++++  +.|++||+++++.+.
T Consensus       150 l~is~D~~~l~~as--~~ik~~~~~~kevv~  178 (541)
T KOG4547|consen  150 LCISPDGKILLTAS--RQIKVLDIETKEVVI  178 (541)
T ss_pred             EEEcCCCCEEEecc--ceEEEEEccCceEEE
Confidence            99999999999886  589999999998764

>KOG2111|consensus

Probab=99.25  E-value=1.6e-09  Score=74.60  Aligned_cols=77  Identities=14%  Similarity=0.295  Sum_probs=67.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCe-EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMN-LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~-i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|.|++.+.+|..+|+++..|+ |||||..+|+.+.+++.......+.+++|+|+..+++++ ++.|++.++.++...
T Consensus       182 s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~Lavs-SdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  182 SDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVS-SDKGTLHIFSLRDTE  259 (346)
T ss_pred             CceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEE-cCCCeEEEEEeecCC
Confidence            46899999999999999998887 589999999999998876667789999999999999875 789999999987643

>KOG0309|consensus

Probab=99.24  E-value=6.3e-11  Score=89.79  Aligned_cols=189  Identities=11%  Similarity=0.164  Sum_probs=133.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCC--CeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPME--AFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.+.++..+|.|+-++.++.-| +.+.|+...-..-....+...-.+..+.|+|..  .+-+++ .....-.+|++....
T Consensus        25 ~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVs-ts~qkaiiwnlA~ss  102 (1081)
T KOG0309|consen   25 GGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVS-TSNQKAIIWNLAKSS  102 (1081)
T ss_pred             CcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEe-cCcchhhhhhhhcCC
Confidence            5678899999999999888776 556677654322222222223345677777643  222222 233444566654221


Q ss_pred             -----------------CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          80 -----------------SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        80 -----------------~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                                       ..+.++...++++++-|..+..||++++..++.....-......++|+-....+.+.+..+.|
T Consensus       103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i  182 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI  182 (1081)
T ss_pred             ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence                             235566678999999999999999999889988887767778899998865556666677889


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCC
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ++||++.+........+|...|+.++|.. .-..+.+++.|++|+.||...
T Consensus       183 ~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k  233 (1081)
T KOG0309|consen  183 FVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK  233 (1081)
T ss_pred             EEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence            99999987665554467888899999875 234677889999999999863

>KOG1240|consensus

Probab=99.22  E-value=3.9e-09  Score=84.19  Aligned_cols=193  Identities=14%  Similarity=0.152  Sum_probs=122.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeee--eee--eeecCcee-eEEeCCC-CCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGP--IRK--VVMSLRSN-MVSWNPM-EAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~--~~~--~~~~~~v~-~~~~~~~-~~~~~~~~~~d~~i~~~   73 (198)
                      ..+.++...+.++.+|.++.||.|++.+++..  +....  .+.  ....+.+. .-+|... +..+++.+..-+.|..|
T Consensus      1099 sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~ 1178 (1431)
T KOG1240|consen 1099 SRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSW 1178 (1431)
T ss_pred             CceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEe
Confidence            35788889999999999999999999998752  11111  111  11122222 2234332 23234445577889999


Q ss_pred             eccCCCCccc---------------cccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCC---CEEE
Q psy8758          74 DIRQLNSPLN---------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTG---REFV  134 (198)
Q Consensus        74 d~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~---~~l~  134 (198)
                      |++.....+.               ......+++|+..|.+.+||++- +.++.... ++..+++.+..+|-.   ...+
T Consensus      1179 D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF-~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~v 1257 (1431)
T KOG1240|consen 1179 DTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRF-RVPILSWEHPARAPIRHVWLCPTYPQESVSV 1257 (1431)
T ss_pred             cchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeec-CceeecccCcccCCcceEEeeccCCCCceEE
Confidence            9986542211               11223689999999999999997 56665553 455778888877753   3555


Q ss_pred             Eee--cCCcEEEEEcCCCceeeEEeccC------------------cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         135 AGG--YDKSLRLYLAHQGHSRDIYHTKR------------------MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       135 ~~~--~d~~v~v~d~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +++  ..+.|.+|++.+|.....+....                  .-......+..-+.++.+|+.|..|+.||..+.+
T Consensus      1258 s~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1258 SAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred             EecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence            444  47899999999986655542220                  0011222233345688899999999999987654


Q ss_pred             c
Q psy8758         195 K  195 (198)
Q Consensus       195 ~  195 (198)
                      .
T Consensus      1338 ~ 1338 (1431)
T KOG1240|consen 1338 I 1338 (1431)
T ss_pred             c
Confidence            3

>KOG4532|consensus

Probab=99.21  E-value=8e-09  Score=69.85  Aligned_cols=180  Identities=8%  Similarity=0.007  Sum_probs=114.4

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCCCccccc-------
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLNSPLNVH-------   85 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~~~~~~~-------   85 (198)
                      .+||.|+..|...+|...+.+....+-. .+...|.-+.=.-+ ...++. ++.|.++++.++.........|       
T Consensus        85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd-~snn~v~~~~r~cd~~~~~~i-~sndht~k~~~~~~~s~~~~~h~~~~~~n  162 (344)
T KOG4532|consen   85 VTLADGGASGQFDLFACNTNDGHLYQCD-VSNNDVTLVKRYCDLKFPLNI-ASNDHTGKTMVVSGDSNKFAVHNQNLTQN  162 (344)
T ss_pred             cEEEeccccceeeeecccCcccceeeec-ccccchhhhhhhcccccceee-ccCCcceeEEEEecCcccceeecccccee
Confidence            4788899999999999876653222211 12221111100001 112333 3577777777765433222222       


Q ss_pred             ------cCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE--
Q psy8758          86 ------KDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI--  155 (198)
Q Consensus        86 ------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~--  155 (198)
                            .+...++.+....|..|.+...++.+..+  ....+.-.+.+|+.....+|++.+||++.|||++.......  
T Consensus       163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~  242 (344)
T KOG4532|consen  163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI  242 (344)
T ss_pred             eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence                  23456677778889999887644443332  23344567889999999999999999999999997433221  


Q ss_pred             --EeccCcccEEEEEEcCCCC--EEEEecCCCeEEEEecCCCcc
Q psy8758         156 --YHTKRMQHVTHTVWSLDNK--FVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       156 --~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~v~~w~~~~~~~  195 (198)
                        ....|.+.++.+.|++-|.  +|...-.-+.+++.|+++++.
T Consensus       243 sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~  286 (344)
T KOG4532|consen  243 SSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVN  286 (344)
T ss_pred             cccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCce
Confidence              2456889999999998765  455555567899999988764

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.21  E-value=2e-08  Score=68.42  Aligned_cols=167  Identities=16%  Similarity=0.158  Sum_probs=94.9

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .-++||||+..||.+...|+|++||+...+ +..+....     ....|..+.|-+...                     
T Consensus        47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~~~~~~d~~~Aiagl~Fl~~~~---------------------  104 (282)
T PF15492_consen   47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPPAMSFPGDLSDAIAGLIFLEYKK---------------------  104 (282)
T ss_pred             eEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCcccccCCccccceeeeEeecccc---------------------
Confidence            458999999999999999999999996433 22222110     112233333332110                     


Q ss_pred             CccccccCceEEEecCCCcEEEEEccC----CCcceee--ec-CCCcceEEEEEccCCCEEEEeecC----C-------c
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQ----LNSPLNV--HK-DMTSAVTSVDYSPTGREFVAGGYD----K-------S  141 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~----~~~~~~~--~~-~~~~~i~~~~~sp~~~~l~~~~~d----~-------~  141 (198)
                         ..+-...+++-...|.++-|-+..    .-+....  +. .++..|.++.|+|..++|++|+..    +       -
T Consensus       105 ---s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~G  181 (282)
T PF15492_consen  105 ---SAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCG  181 (282)
T ss_pred             ---ccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccC
Confidence               000011222233333333333210    0112222  22 246678999999998887776642    1       2


Q ss_pred             EEEEEcCCCceeeE--------------------------E--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         142 LRLYLAHQGHSRDI--------------------------Y--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       142 v~v~d~~~~~~~~~--------------------------~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +.-|.+-.+.+...                          +  .......|..|..||||+.||+...+|.|.+|++.+-
T Consensus       182 LtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL  261 (282)
T PF15492_consen  182 LTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSL  261 (282)
T ss_pred             ceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcc
Confidence            44554432211000                          0  0112467999999999999999999999999999875


Q ss_pred             ccc
Q psy8758         194 EKL  196 (198)
Q Consensus       194 ~~~  196 (198)
                      ++.
T Consensus       262 ~~~  264 (282)
T PF15492_consen  262 RLQ  264 (282)
T ss_pred             hhh
Confidence            543

>KOG4714|consensus

Probab=99.18  E-value=1.3e-10  Score=77.85  Aligned_cols=94  Identities=16%  Similarity=0.225  Sum_probs=71.6

Q ss_pred             cEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC-CCCE
Q psy8758          98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKF  175 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~  175 (198)
                      ..+.|+++........... ...+.+++-+|..+ .+++|+.||.+-+||.+.......+...|+.+++.+-|+| ++..
T Consensus       160 ~~~a~~~~p~~t~~~~~~~-~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~  238 (319)
T KOG4714|consen  160 NFYANTLDPIKTLIPSKKA-LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH  238 (319)
T ss_pred             ceeeecccccccccccccc-cccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh
Confidence            3556666542222222222 23488999999654 6678888999999999998766666688999999999999 6779


Q ss_pred             EEEecCCCeEEEEecCC
Q psy8758         176 VISASDEMNLRVWKAHA  192 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~  192 (198)
                      |+++++||.+..||..+
T Consensus       239 Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  239 LFTCSEDGSLWHWDAST  255 (319)
T ss_pred             eeEecCCCcEEEEcCCC
Confidence            99999999999999874

>KOG1334|consensus

Probab=99.18  E-value=2.4e-10  Score=82.68  Aligned_cols=192  Identities=14%  Similarity=0.149  Sum_probs=138.2

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeee-c---CceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVM-S---LRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ++|.-++.-|+. ..|.+++.|+.+.-+|+..+.....+..... .   .....++..|...+.+++|+.|...++||.+
T Consensus       233 g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R  312 (559)
T KOG1334|consen  233 GPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQR  312 (559)
T ss_pred             CccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhccc
Confidence            567788888865 4788999999999999987654333333222 2   2457899999999888888899999999987


Q ss_pred             CCCCc--------ccc-----------------ccCceEEEecCCCcEEEEEccCC-C----------ccee-eecCCCc
Q psy8758          77 QLNSP--------LNV-----------------HKDMTSAAANEDFNLYSYDIRQL-N----------SPLN-VHKDMTS  119 (198)
Q Consensus        77 ~~~~~--------~~~-----------------~~~~~~~~~~~~~~i~~~d~~~~-~----------~~~~-~~~~~~~  119 (198)
                      .....        +.+                 |.+.-+.+...|-.|+++.-... +          .... .+++|..
T Consensus       313 ~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN  392 (559)
T KOG1334|consen  313 RIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRN  392 (559)
T ss_pred             chhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhccccc
Confidence            54321        111                 12223556667777888853321 1          1122 2566654


Q ss_pred             c--eEEEE-EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         120 A--VTSVD-YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       120 ~--i~~~~-~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .  |..+- |-|...++++|+.-|.|.||+-.+++.+..+. +...-|+++.=+|--..||+++-|.-|+||-..+.+
T Consensus       393 ~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Me-gDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~e  469 (559)
T KOG1334|consen  393 SRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFME-GDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAE  469 (559)
T ss_pred             ccccceeeeccCccceEEecCccceEEEEecchhHHHHHhh-cccceEeccCCCCCCchhhccCCccceeeecCCccc
Confidence            3  55554 57888999999999999999999999988774 333489999999988999999999999999885544

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.17  E-value=7e-09  Score=75.36  Aligned_cols=140  Identities=17%  Similarity=0.179  Sum_probs=102.9

Q ss_pred             eeEEEECCCCceEEEeeCCC-eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSLDNKFVISASDEM-NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~-~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      |.-..+.-+++-++.|..|| .+-++|..+++..+....   -+.|.++..+|+|+.++++ .....+++.|+.+.    
T Consensus       362 VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~---lg~I~av~vs~dGK~~vva-Ndr~el~vididng----  433 (668)
T COG4946         362 VRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKD---LGNIEAVKVSPDGKKVVVA-NDRFELWVIDIDNG----  433 (668)
T ss_pred             eEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCC---ccceEEEEEcCCCcEEEEE-cCceEEEEEEecCC----
Confidence            55556667777888899888 899999988764333333   3568899999999998774 67788888888763    


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC----cEEEEEcCCCceeeEEec
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK----SLRLYLAHQGHSRDIYHT  158 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~----~v~v~d~~~~~~~~~~~~  158 (198)
                                                .+...-+...+-|+.++|||+++++|-+--+|    .|+++|+..++.....  
T Consensus       434 --------------------------nv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT--  485 (668)
T COG4946         434 --------------------------NVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT--  485 (668)
T ss_pred             --------------------------CeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec--
Confidence                                      33222233456789999999999999876554    7999999998876654  


Q ss_pred             cCcccEEEEEEcCCCCEEEEe
Q psy8758         159 KRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       159 ~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      ...+.-.+.+|.||+++|.--
T Consensus       486 T~ta~DfsPaFD~d~ryLYfL  506 (668)
T COG4946         486 TPTAYDFSPAFDPDGRYLYFL  506 (668)
T ss_pred             CCcccccCcccCCCCcEEEEE
Confidence            222445667899999977644

>KOG2314|consensus

Probab=99.17  E-value=2.8e-09  Score=78.54  Aligned_cols=72  Identities=19%  Similarity=0.362  Sum_probs=53.3

Q ss_pred             cceEEEEEccCCCEEEEe---ecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC------CCeEEEEe
Q psy8758         119 SAVTSVDYSPTGREFVAG---GYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD------EMNLRVWK  189 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~---~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~v~~w~  189 (198)
                      ...+.+.|+|.|++++.+   |..|.+.++|+.-..+...-...| ...+.+.|.|.|+|+++++.      |.--++|+
T Consensus       493 ~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~t  571 (698)
T KOG2314|consen  493 KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFT  571 (698)
T ss_pred             cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhccccceEEEE
Confidence            446789999999988765   457899999998644433332334 46778999999999998864      45567777


Q ss_pred             cC
Q psy8758         190 AH  191 (198)
Q Consensus       190 ~~  191 (198)
                      ++
T Consensus       572 fq  573 (698)
T KOG2314|consen  572 FQ  573 (698)
T ss_pred             ee
Confidence            64

>KOG2695|consensus

Probab=99.16  E-value=4.1e-10  Score=78.38  Aligned_cols=148  Identities=13%  Similarity=0.145  Sum_probs=99.7

Q ss_pred             EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCC
Q psy8758          18 SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF   97 (198)
Q Consensus        18 ~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~   97 (198)
                      +.+.+..+-+-+++++.. +.+.   ....|.++.|...++.++. |..+|.|..+|++...+                 
T Consensus       229 s~G~sqqv~L~nvetg~~-qsf~---sksDVfAlQf~~s~nLv~~-GcRngeI~~iDLR~rnq-----------------  286 (425)
T KOG2695|consen  229 SVGLSQQVLLTNVETGHQ-QSFQ---SKSDVFALQFAGSDNLVFN-GCRNGEIFVIDLRCRNQ-----------------  286 (425)
T ss_pred             cccccceeEEEEeecccc-cccc---cchhHHHHHhcccCCeeEe-cccCCcEEEEEeeeccc-----------------
Confidence            334455666777766642 2222   2456777777776666654 56788888888775311                 


Q ss_pred             cEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEcCCCce---eeEEeccCcccEEE--EEEcC
Q psy8758          98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHS---RDIYHTKRMQHVTH--TVWSL  171 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~~~~~~---~~~~~~~~~~~v~~--~~~s~  171 (198)
                              ..+.+...+ .|.+.|+++..-. ++++|.+++.+|.|++||++.-++   +..+ .+|...-.-  +-..+
T Consensus       287 --------G~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qY-eGHvN~~a~l~~~v~~  356 (425)
T KOG2695|consen  287 --------GNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQY-EGHVNLSAYLPAHVKE  356 (425)
T ss_pred             --------CCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeee-eccccccccccccccc
Confidence                    002333333 4888899988766 788999999999999999998666   5555 566433222  23355


Q ss_pred             CCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         172 DNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       172 ~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ....++++++|...++|.++.|.+++
T Consensus       357 eeg~I~s~GdDcytRiWsl~~ghLl~  382 (425)
T KOG2695|consen  357 EEGSIFSVGDDCYTRIWSLDSGHLLC  382 (425)
T ss_pred             ccceEEEccCeeEEEEEecccCceee
Confidence            66688889999999999999988764

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.16  E-value=1.6e-10  Score=56.32  Aligned_cols=38  Identities=21%  Similarity=0.471  Sum_probs=35.8

Q ss_pred             cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758         109 SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus       109 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      +++..+.+|...|++++|+|++++|++++.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            46788899999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.15  E-value=2.3e-08  Score=74.41  Aligned_cols=153  Identities=9%  Similarity=-0.006  Sum_probs=90.5

Q ss_pred             eeEEEECCCCceEEEe-eC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           4 VTHTVWSLDNKFVISA-SD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~-~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ....+|+|||+.++.. +.  +..|.++++.+++ ...+...  ........|+|||+.++.+....+.           
T Consensus       235 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~--~~~d~~p~~SPDG~~I~F~Sdr~g~-----------  300 (419)
T PRK04043        235 LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNY--PGIDVNGNFVEDDKRIVFVSDRLGY-----------  300 (419)
T ss_pred             EEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccC--CCccCccEECCCCCEEEEEECCCCC-----------
Confidence            4567899999876644 33  3467777876665 3344322  2223456899999998887543322           


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC---------CcEEEEEcCCCc
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---------KSLRLYLAHQGH  151 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---------~~v~v~d~~~~~  151 (198)
                                      ..|.+.|+.. ++..+ +......  ...|||||+.++..+..         ..|.+.|+.++.
T Consensus       301 ----------------~~Iy~~dl~~-g~~~r-lt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~  360 (419)
T PRK04043        301 ----------------PNIFMKKLNS-GSVEQ-VVFHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY  360 (419)
T ss_pred             ----------------ceEEEEECCC-CCeEe-CccCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC
Confidence                            1233333332 22212 2111111  24899999988776543         368888988887


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCC
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHAS  193 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~  193 (198)
                      ...... .  .......|+|||+.|+....+   ..+.+.+++..
T Consensus       361 ~~~LT~-~--~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~  402 (419)
T PRK04043        361 IRRLTA-N--GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN  402 (419)
T ss_pred             eEECCC-C--CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence            654432 2  233458999999987765432   24666676543

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.15  E-value=2.4e-09  Score=73.84  Aligned_cols=185  Identities=14%  Similarity=0.261  Sum_probs=121.1

Q ss_pred             cceeEEEECCCC--ceEEEeeCCCeEEEEEccCCce-----------------------------------------eee
Q psy8758           2 QHVTHTVWSLDN--KFVISASDEMNLRVWKAHASEK-----------------------------------------LGP   38 (198)
Q Consensus         2 ~~v~~~~~s~~~--~~l~~~~~d~~i~i~~~~~~~~-----------------------------------------~~~   38 (198)
                      +.|+.+.|..++  ..++..+.|.+|++|.+.....                                         +..
T Consensus        86 EKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~r  165 (460)
T COG5170          86 EKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCR  165 (460)
T ss_pred             HHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccce
Confidence            457788887654  3566677899999998754310                                         000


Q ss_pred             eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc--------------------ccc--cCceEEEecCC
Q psy8758          39 IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL--------------------NVH--KDMTSAAANED   96 (198)
Q Consensus        39 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~--------------------~~~--~~~~~~~~~~~   96 (198)
                      +....|.-.++++.|+.|.+.+++  ..|-.|.+|++.-....+                    ..|  ...++.-.+..
T Consensus       166 vyaNaH~yhiNSiS~NsD~et~lS--aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSk  243 (460)
T COG5170         166 VYANAHPYHINSISFNSDKETLLS--ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSK  243 (460)
T ss_pred             eccccceeEeeeeeecCchheeee--ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCC
Confidence            111124445789999999888876  378899999987443221                    112  22467778889


Q ss_pred             CcEEEEEccCCCcc-----ee----------eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc-eeeEEeccC
Q psy8758          97 FNLYSYDIRQLNSP-----LN----------VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH-SRDIYHTKR  160 (198)
Q Consensus        97 ~~i~~~d~~~~~~~-----~~----------~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~-~~~~~~~~~  160 (198)
                      |.|++-|+++..-+     +.          -++.-...|..+.|+|+|+++++-+. .+|++||.+..+ ++.++ .-|
T Consensus       244 G~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi-~~h  321 (460)
T COG5170         244 GEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTI-PMH  321 (460)
T ss_pred             CcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceee-chH
Confidence            99999999952111     11          11222356888999999999988765 579999998643 34443 111


Q ss_pred             ------------ccc---EEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         161 ------------MQH---VTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       161 ------------~~~---v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                                  ...   -..+.||.|.+.+++|+..+..-++-.
T Consensus       322 ~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~  366 (460)
T COG5170         322 CDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT  366 (460)
T ss_pred             HHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecc
Confidence                        122   245788888888999988777766653

>KOG4532|consensus

Probab=99.12  E-value=2.2e-08  Score=67.80  Aligned_cols=163  Identities=13%  Similarity=0.071  Sum_probs=107.7

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ++.++++|+++++++.++...|..|.++.. +....+.....+..-.+..|+.....+++ +..||.+.+||++....+.
T Consensus       161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv-~~Qdg~~~I~DVR~~~tpm  239 (344)
T KOG4532|consen  161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAV-VFQDGTCAIYDVRNMATPM  239 (344)
T ss_pred             eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEE-EecCCcEEEEEecccccch
Confidence            678999999999999999999999998643 22222222223344467788876665544 5789999999988753221


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC--EEEEeecCCcEEEEEcCCCceeeEEec--
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR--EFVAGGYDKSLRLYLAHQGHSRDIYHT--  158 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~--~l~~~~~d~~v~v~d~~~~~~~~~~~~--  158 (198)
                                               ...-.+...|.+.+..+.|+|-|.  +|...-.-+.+.+.|++++...+.+..  
T Consensus       240 -------------------------~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~  294 (344)
T KOG4532|consen  240 -------------------------AEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPD  294 (344)
T ss_pred             -------------------------hhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCc
Confidence                                     111223345889999999998664  555555568899999999876655422  


Q ss_pred             ----cCc-ccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         159 ----KRM-QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       159 ----~~~-~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                          .|. ..+..-.|+.++.-+.+..++ .+.=|++...
T Consensus       295 d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~sr  333 (344)
T KOG4532|consen  295 DVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSR  333 (344)
T ss_pred             cccccccccccccccccCCCcccccccch-hhheeecccc
Confidence                222 337777788777665555433 3455555443

>KOG0309|consensus

Probab=99.12  E-value=5.5e-10  Score=84.85  Aligned_cols=186  Identities=16%  Similarity=0.233  Sum_probs=130.9

Q ss_pred             eeEEEECCCCc---eEEEeeCCCeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           4 VTHTVWSLDNK---FVISASDEMNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         4 v~~~~~s~~~~---~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      |..+.|+|...   ++++.+ ...-.+|++... ...-.+..+.|...++.+-|+|..+.++++++-|-.+..||++...
T Consensus        70 vad~qws~h~a~~~wiVsts-~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~  148 (1081)
T KOG0309|consen   70 VADVQWSPHPAKPYWIVSTS-NQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPH  148 (1081)
T ss_pred             hcceecccCCCCceeEEecC-cchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCC
Confidence            56678888553   454444 445568998643 2233455567888999999999999999999999999999999876


Q ss_pred             Cccccc--------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEE
Q psy8758          80 SPLNVH--------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRL  144 (198)
Q Consensus        80 ~~~~~~--------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v  144 (198)
                      .++...              .++.+.+.+....+.+||++....++..+++|...++.++|..- ...+.+++.|++|++
T Consensus       149 ~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkf  228 (1081)
T KOG0309|consen  149 RPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKF  228 (1081)
T ss_pred             cceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceee
Confidence            544321              12234455666779999999988999999999999999999764 346788899999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCC--EEEEecCCCeEEEEec
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNK--FVISASDEMNLRVWKA  190 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~v~~w~~  190 (198)
                      ||................+|+..++-|=|+  ++.-.-.++.+.+++.
T Consensus       229 w~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c  276 (1081)
T KOG0309|consen  229 WDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRC  276 (1081)
T ss_pred             ecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccc
Confidence            999876544333334457888888888544  3332222334444443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.11  E-value=1.2e-07  Score=77.92  Aligned_cols=188  Identities=16%  Similarity=0.189  Sum_probs=119.1

Q ss_pred             eEEEECCC-CceEEEeeCCCeEEEEEccCCceeeeeeeee------------ecCceeeEEeCCCCCeEEEEecCCccEE
Q psy8758           5 THTVWSLD-NKFVISASDEMNLRVWKAHASEKLGPIRKVV------------MSLRSNMVSWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         5 ~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~d~~i~   71 (198)
                      ..+++++. ++.+++-+..+.|+++|.. ++....+....            .-.....+++++++..++++-.....|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            35788874 5566666678899999975 44333322200            0113478999998887777655567788


Q ss_pred             EEeccCCCC-c---------------------c------c--cccCceEEEecCCCcEEEEEccCCCcceeeecC-----
Q psy8758          72 SYDIRQLNS-P---------------------L------N--VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-----  116 (198)
Q Consensus        72 ~~d~~~~~~-~---------------------~------~--~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----  116 (198)
                      .+|..+... .                     +      .  ...+.++++...++.|++||... +. +..+.+     
T Consensus       650 ~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~-g~-v~~~~G~G~~~  727 (1057)
T PLN02919        650 EIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISD-GV-TRVFSGDGYER  727 (1057)
T ss_pred             EEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCC-Ce-EEEEecCCccc
Confidence            888643211 0                     0      0  01234566777788899999875 22 221111     


Q ss_pred             ----------CCcceEEEEEccCCCEE-EEeecCCcEEEEEcCCCceeeEEe-----------cc---------CcccEE
Q psy8758         117 ----------MTSAVTSVDYSPTGREF-VAGGYDKSLRLYLAHQGHSRDIYH-----------TK---------RMQHVT  165 (198)
Q Consensus       117 ----------~~~~i~~~~~sp~~~~l-~~~~~d~~v~v~d~~~~~~~~~~~-----------~~---------~~~~v~  165 (198)
                                .-.....|+++|+++.| ++-+.++.|++||+.++.......           .+         .-....
T Consensus       728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~  807 (1057)
T PLN02919        728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL  807 (1057)
T ss_pred             cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence                      11235679999999854 455667899999998765321110           00         011346


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         166 HTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       166 ~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .++++++|+.+++-..++.|++||..++..
T Consensus       808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v  837 (1057)
T PLN02919        808 GVLCAKDGQIYVADSYNHKIKKLDPATKRV  837 (1057)
T ss_pred             eeeEeCCCcEEEEECCCCEEEEEECCCCeE
Confidence            889999999888888899999999987654

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.11  E-value=4.3e-10  Score=54.71  Aligned_cols=38  Identities=24%  Similarity=0.548  Sum_probs=33.9

Q ss_pred             ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      +++..+ .+|...|++++|+|++++|++++.|+.|++||
T Consensus         2 ~~~~~~-~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTF-RGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEE-ESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEE-cCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            344555 78999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1409|consensus

Probab=99.10  E-value=3e-09  Score=74.04  Aligned_cols=31  Identities=6%  Similarity=0.294  Sum_probs=26.8

Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ..|+.|.+...-.+|+|++.|..|+|||++.
T Consensus       365 tgItamhlqetlglLvTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  365 TGITAMHLQETLGLLVTSGTDRVIKIWDVRS  395 (404)
T ss_pred             cceeEEEhhhhccceeecCCceEEEEEechh
Confidence            4688888887777899999999999999864

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.08  E-value=6.2e-09  Score=71.90  Aligned_cols=191  Identities=11%  Similarity=0.230  Sum_probs=120.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-ee----eeeeee----------eecCceeeEEeCCCC-C-eEEEEe
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KL----GPIRKV----------VMSLRSNMVSWNPME-A-FVFTAA   64 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~----~~~~~~----------~~~~~v~~~~~~~~~-~-~~~~~~   64 (198)
                      ..|+++.|...|.++++|...|.|.+|.-+... +.    ..++.+          .....|..+.|..++ + .++. .
T Consensus        27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl-s  105 (460)
T COG5170          27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL-S  105 (460)
T ss_pred             ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE-e
Confidence            358899999999999999999999999754322 11    112221          123457788886543 2 2333 3


Q ss_pred             cCCccEEEEeccCCCCc-----------------------------cccccC--------------------------ce
Q psy8758          65 NEDFNLYSYDIRQLNSP-----------------------------LNVHKD--------------------------MT   89 (198)
Q Consensus        65 ~~d~~i~~~d~~~~~~~-----------------------------~~~~~~--------------------------~~   89 (198)
                      ..|.+|++|.+......                             +..|..                          .-
T Consensus       106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~e  185 (460)
T COG5170         106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKE  185 (460)
T ss_pred             cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchh
Confidence            58999999998643110                             000100                          01


Q ss_pred             EEEecCCCcEEEEEccCCCccee--eecCCC-----cceEEEEEccCC-CEEEEeecCCcEEEEEcCCCcee------eE
Q psy8758          90 SAAANEDFNLYSYDIRQLNSPLN--VHKDMT-----SAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHSR------DI  155 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~-----~~i~~~~~sp~~-~~l~~~~~d~~v~v~d~~~~~~~------~~  155 (198)
                      .....+|-.|.+|.+.-......  .+++|.     .-|++..|+|.. ..+..++..|.|++-|++...+-      ..
T Consensus       186 t~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe  265 (460)
T COG5170         186 TLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFE  265 (460)
T ss_pred             eeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhh
Confidence            23334566788898875433332  233443     348889999973 46667777899999999853211      11


Q ss_pred             E---------eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         156 Y---------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       156 ~---------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .         ..+-...|..+.|+++|+++++-.. -+|++||++-.+
T Consensus       266 ~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k  312 (460)
T COG5170         266 LTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAK  312 (460)
T ss_pred             hccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccccc
Confidence            0         0112356889999999999987653 689999997543

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=99.06  E-value=5.7e-08  Score=72.37  Aligned_cols=73  Identities=23%  Similarity=0.292  Sum_probs=63.2

Q ss_pred             CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         116 DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       116 ~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ..+..+.+.+++|+.+.++.|..||.|.+||...+.....   ...-.+..++|+|+|..+++|+..|.+.+||+.
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~---ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A  329 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA---KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA  329 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee---eecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence            4677899999999999999999999999999988754433   223567899999999999999999999999985

>KOG2315|consensus

Probab=99.03  E-value=1.3e-08  Score=75.05  Aligned_cols=130  Identities=13%  Similarity=0.199  Sum_probs=87.2

Q ss_pred             cceeEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC--CccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE--DFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~~   77 (198)
                      ++|.++.|+|+|+.+++.  -.=-.+.|||+.. ..+..+    .+++-+++-|+|.|+.++.+|-.  .|.+-+||+. 
T Consensus       271 GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~-~~v~df----~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~-  344 (566)
T KOG2315|consen  271 GPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG-KPVFDF----PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVP-  344 (566)
T ss_pred             CCceEEEECCCCCEEEEEEecccceEEEEcCCC-CEeEeC----CCCCccceEECCCCCEEEEeecCCCCCceEEEecc-
Confidence            789999999999877654  3445788999853 322222    24556789999999999998732  3445555554 


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec------CCcEEEEEcCCCc
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY------DKSLRLYLAHQGH  151 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------d~~v~v~d~~~~~  151 (198)
                                                  + .+.+..+...  .-+-..|+|||++++|+..      |+.++||+.....
T Consensus       345 ----------------------------n-~K~i~~~~a~--~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~  393 (566)
T KOG2315|consen  345 ----------------------------N-RKLIAKFKAA--NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL  393 (566)
T ss_pred             ----------------------------c-hhhccccccC--CceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence                                        3 4556555433  3456799999999998864      7889999986543


Q ss_pred             eeeEEeccCcccEEEEEEcC
Q psy8758         152 SRDIYHTKRMQHVTHTVWSL  171 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~  171 (198)
                      . ......  ...+.+.|-|
T Consensus       394 l-~~~~f~--sEL~qv~W~P  410 (566)
T KOG2315|consen  394 L-HEKMFK--SELLQVEWRP  410 (566)
T ss_pred             e-ehhhhh--HhHhheeeee
Confidence            3 222111  1467777776

>KOG0882|consensus

Probab=99.00  E-value=1e-08  Score=73.91  Aligned_cols=189  Identities=12%  Similarity=0.087  Sum_probs=132.7

Q ss_pred             ECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc------
Q psy8758           9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP------   81 (198)
Q Consensus         9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~------   81 (198)
                      +....+++.+++-||.++.|.-..-.-..-+... .|-..+.+++.+.++....+.+..|..++++|+......      
T Consensus        16 ~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~   95 (558)
T KOG0882|consen   16 FPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLV   95 (558)
T ss_pred             eeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccc
Confidence            3345678999999999999985321211222221 155667788888887766554444999999998753211      


Q ss_pred             -------cccccC----ceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          82 -------LNVHKD----MTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        82 -------~~~~~~----~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                             +...++    .+.++...++.+.++|-+... +....-.-|..+|..+.++|.+..+++....|.|.-|....
T Consensus        96 ~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~  175 (558)
T KOG0882|consen   96 DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG  175 (558)
T ss_pred             cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC
Confidence                   111122    345556678999999987644 33444456899999999999999999999999999999873


Q ss_pred             ------CceeeEE--------eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         150 ------GHSRDIY--------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       150 ------~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                            ......+        .........++.|+|+|..+.+-+.|..|+++++++|+.+.
T Consensus       176 ~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvq  237 (558)
T KOG0882|consen  176 PFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQ  237 (558)
T ss_pred             cccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhh
Confidence                  1111111        11234567899999999999999999999999999998753

>KOG2695|consensus

Probab=98.99  E-value=2.3e-09  Score=74.71  Aligned_cols=141  Identities=8%  Similarity=0.040  Sum_probs=98.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCce--eeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK--LGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .|.++.|...++++..|...|.|..+|+..+..  ..+...+.|...|+++..-. ++++|+++ +.+|+|++||++-.+
T Consensus       254 DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS-~M~gkikLyD~R~~K  332 (425)
T KOG2695|consen  254 DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMAS-DMTGKIKLYDLRATK  332 (425)
T ss_pred             hHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeec-cCcCceeEeeehhhh
Confidence            466777888889999999999999999976521  23344445778888887665 66777765 688888888887531


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE--EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS--VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~--~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~  157 (198)
                      .                           ++-+.++++|...-.-  +-..+....+++++.|...|||.++.+.++..+.
T Consensus       333 ~---------------------------~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip  385 (425)
T KOG2695|consen  333 C---------------------------KKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP  385 (425)
T ss_pred             c---------------------------ccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence            1                           2346777777543322  3345667788899999999999999999887762


Q ss_pred             cc---CcccEEEEEEcC
Q psy8758         158 TK---RMQHVTHTVWSL  171 (198)
Q Consensus       158 ~~---~~~~v~~~~~s~  171 (198)
                      ..   ....+.+++|..
T Consensus       386 f~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  386 FPYSASEVDIPSVAFDS  402 (425)
T ss_pred             CCCccccccccceehhc
Confidence            22   123566677654

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.98  E-value=4.9e-07  Score=63.38  Aligned_cols=174  Identities=14%  Similarity=0.123  Sum_probs=106.5

Q ss_pred             EEECCCCceEEEeeC-----CCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           7 TVWSLDNKFVISASD-----EMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~-----d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      -.||+||++|++.-+     .|.|-|||.. +-+.+.++..  +....-.+.+.||++.|+++-  .|.-.-=|.  ...
T Consensus        56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s--~GIGPHel~l~pDG~tLvVAN--GGI~Thpd~--GR~  129 (305)
T PF07433_consen   56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPS--HGIGPHELLLMPDGETLVVAN--GGIETHPDS--GRA  129 (305)
T ss_pred             EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecC--CCcChhhEEEcCCCCEEEEEc--CCCccCccc--Cce
Confidence            469999999998743     5789999997 3333344433  344456788999998887742  222111111  000


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceee--e--cCCCcceEEEEEccCCCEEEEeecCCc-------EEEEEcCC
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNV--H--KDMTSAVTSVDYSPTGREFVAGGYDKS-------LRLYLAHQ  149 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~--~--~~~~~~i~~~~~sp~~~~l~~~~~d~~-------v~v~d~~~  149 (198)
                              .+-..+.+..+...|..+ ++.+.+  +  ..|+..+.-+++.++|..++..-..+.       +.+++.  
T Consensus       130 --------kLNl~tM~psL~~ld~~s-G~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--  198 (305)
T PF07433_consen  130 --------KLNLDTMQPSLVYLDARS-GALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--  198 (305)
T ss_pred             --------ecChhhcCCceEEEecCC-CceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--
Confidence                    111122344556666666 555555  3  236778999999999987666544332       333332  


Q ss_pred             CceeeEEec------cCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCcccc
Q psy8758         150 GHSRDIYHT------KRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       150 ~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~~~  197 (198)
                      ++.+..+..      .-.+.+-++++++++.+++..+ ..|.+.+||..+++.+.
T Consensus       199 g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~  253 (305)
T PF07433_consen  199 GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLG  253 (305)
T ss_pred             CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEee
Confidence            222222211      1236799999999998776554 56889999999998764

>KOG4190|consensus

Probab=98.98  E-value=3.4e-09  Score=78.51  Aligned_cols=153  Identities=8%  Similarity=0.022  Sum_probs=104.7

Q ss_pred             CCCceEEEeeCCCeEEEEEccCC-----ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc
Q psy8758          11 LDNKFVISASDEMNLRVWKAHAS-----EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH   85 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~   85 (198)
                      .+.+-+++++.|++|++|.+...     .....+....|..+|.++.|-.+.+.+++   .|+-|.+||.-.        
T Consensus       745 dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S---cD~giHlWDPFi--------  813 (1034)
T KOG4190|consen  745 DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS---CDGGIHLWDPFI--------  813 (1034)
T ss_pred             ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee---ccCcceeecccc--------
Confidence            35567889999999999998632     11122333337888999999888877753   477788887543        


Q ss_pred             cCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccC--CCEEE-EeecCCcEEEEEcCCCceeeEEe---
Q psy8758          86 KDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPT--GREFV-AGGYDKSLRLYLAHQGHSRDIYH---  157 (198)
Q Consensus        86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~--~~~l~-~~~~d~~v~v~d~~~~~~~~~~~---  157 (198)
                                            +.++.+..  ...+....+..-|+  ...++ -++...+|+++|.+..+....+.   
T Consensus       814 ----------------------gr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn  871 (1034)
T KOG4190|consen  814 ----------------------GRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN  871 (1034)
T ss_pred             ----------------------cchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEecc
Confidence                                  23333221  11223333333343  33333 44778999999999987655542   


Q ss_pred             -ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         158 -TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       158 -~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                       .+.+..+++++..|.|+.++.+-.+|+|.+.|.++|+.+
T Consensus       872 a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vI  911 (1034)
T KOG4190|consen  872 APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVI  911 (1034)
T ss_pred             CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCcee
Confidence             334567899999999999999999999999999999865

>KOG4714|consensus

Probab=98.97  E-value=5.4e-09  Score=70.29  Aligned_cols=74  Identities=16%  Similarity=0.241  Sum_probs=58.0

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEE
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  126 (198)
                      .|.+++-+|..+.++.+|+.||.+-+||.++.                             ..+...+..|+.++..+-|
T Consensus       181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~-----------------------------~~p~S~l~ahk~~i~eV~F  231 (319)
T KOG4714|consen  181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNV-----------------------------AMPVSLLKAHKAEIWEVHF  231 (319)
T ss_pred             cchhhhCCcccccEEEEecCCCeEEEEEcccc-----------------------------cchHHHHHHhhhhhhheec
Confidence            36667777777777776666666666666653                             5666777889999999999


Q ss_pred             ccC-CCEEEEeecCCcEEEEEcCC
Q psy8758         127 SPT-GREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus       127 sp~-~~~l~~~~~d~~v~v~d~~~  149 (198)
                      +|. +..|++++.||.+..||..+
T Consensus       232 Hpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  232 HPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             cCCCchheeEecCCCcEEEEcCCC
Confidence            995 67999999999999999874

>KOG1832|consensus

Probab=98.97  E-value=6.4e-10  Score=86.25  Aligned_cols=181  Identities=14%  Similarity=0.144  Sum_probs=127.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-cEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-NLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~~d~~~~~~~   81 (198)
                      .-+|++|+-+.+.|+.|+-.|.|++|++.+|.....+..  |..+++.+.-+.+|..++++++... -..+|++......
T Consensus      1103 ~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~nc--H~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~ 1180 (1516)
T KOG1832|consen 1103 LFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNC--HQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGP 1180 (1516)
T ss_pred             ceeeEEeecCCceEEeeeccceEEEEEccCccccccccc--cccccccccccCCcceeeeeccccCchHHHhccccccCc
Confidence            468999999999999999999999999999987666665  5778899988889998888765554 4678888643211


Q ss_pred             ---ccccc-------CceEEEecCCCcEEEEEccCCCcceeee-cC---CCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          82 ---LNVHK-------DMTSAAANEDFNLYSYDIRQLNSPLNVH-KD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        82 ---~~~~~-------~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                         +....       ...-+.|+......+||+.+ ..++.++ .+   ....-++..|+|+.++++-   ||  .+||.
T Consensus      1181 ~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT-~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln---dG--vLWDv 1254 (1516)
T KOG1832|consen 1181 RHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQT-CSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN---DG--VLWDV 1254 (1516)
T ss_pred             cccccccceeehhhhHHHHHhcccccceEEEeccc-CcHHHHhcCcchhhhhhccccccCCCcceEee---Cc--eeeee
Confidence               11110       11234455557788999998 5555543 21   2223477889999887653   44  48999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccccC
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH  198 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~~  198 (198)
                      +..+.+..+...  ..-..-.|+|.|..++..++     |||++|.+.+.|
T Consensus      1255 R~~~aIh~FD~f--t~~~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~ 1298 (1516)
T KOG1832|consen 1255 RIPEAIHRFDQF--TDYGGGGFHPSGNEVIINSE-----IWDMRTFKLLHS 1298 (1516)
T ss_pred             ccHHHHhhhhhh--eecccccccCCCceEEeech-----hhhhHHHHHHhc
Confidence            988776665221  12223469999998887664     899999887754

>KOG1064|consensus

Probab=98.96  E-value=1.1e-08  Score=84.67  Aligned_cols=147  Identities=10%  Similarity=0.136  Sum_probs=116.2

Q ss_pred             CceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--------------ccccccCceEEEecCCCcEEEEEccCCCcce
Q psy8758          46 LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPL  111 (198)
Q Consensus        46 ~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~  111 (198)
                      ..|.++.=+|...+.++ |+.||.+++|.-.....              ....+.+..+..+..||.+.+|...  .++.
T Consensus      2209 ~~v~r~~sHp~~~~Ylt-gs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~--pk~~ 2285 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLT-GSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS--PKPY 2285 (2439)
T ss_pred             CceeeecCCCCCceEEe-cCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC--Ccce
Confidence            34667777888887765 67999999887543322              2334566778899999999999998  3777


Q ss_pred             eeecCCCcceEEEEEccCCCEEEEee---cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         112 NVHKDMTSAVTSVDYSPTGREFVAGG---YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       112 ~~~~~~~~~i~~~~~sp~~~~l~~~~---~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      .....|........|-.  ..+++.+   .++.+.+||..-......++..|.+.++.+++.|..+.|++|+.+|.|++|
T Consensus      2286 ~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~ 2363 (2439)
T KOG1064|consen 2286 TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLF 2363 (2439)
T ss_pred             eccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEe
Confidence            77888888888888864  5666654   467899999987666666668899999999999999999999999999999


Q ss_pred             ecCCCcccc
Q psy8758         189 KAHASEKLE  197 (198)
Q Consensus       189 ~~~~~~~~~  197 (198)
                      |++..+++.
T Consensus      2364 D~rqrql~h 2372 (2439)
T KOG1064|consen 2364 DIRQRQLRH 2372 (2439)
T ss_pred             ehHHHHHHH
Confidence            998766543

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.93  E-value=2.3e-06  Score=59.51  Aligned_cols=146  Identities=10%  Similarity=0.068  Sum_probs=93.1

Q ss_pred             ceeEEEECCCCceEEEeeCC--------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           3 HVTHTVWSLDNKFVISASDE--------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d--------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      ..+++++.|+|++.++....        |.+..++.. ++. ..+..  .-...+.++|+|+++.++++-+..+.|+.++
T Consensus        87 ~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~-~~~~~--~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~  162 (246)
T PF08450_consen   87 RPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKV-TVVAD--GLGFPNGIAFSPDGKTLYVADSFNGRIWRFD  162 (246)
T ss_dssp             EEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEE-EEEEE--EESSEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred             CCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeE-EEEec--CcccccceEECCcchheeecccccceeEEEe
Confidence            46789999999977765433        446556654 332 22222  2344689999999999988777788888888


Q ss_pred             ccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758          75 IRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                      +......+..                       ......+.........+++.++|++.++....+.|.++|.+ |+.+.
T Consensus       163 ~~~~~~~~~~-----------------------~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~  218 (246)
T PF08450_consen  163 LDADGGELSN-----------------------RRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLR  218 (246)
T ss_dssp             EETTTCCEEE-----------------------EEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEE
T ss_pred             ccccccceee-----------------------eeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEE
Confidence            7643110000                       01111222222347789999999988888888999999988 88777


Q ss_pred             EEeccCcccEEEEEEc-CCCCEEE
Q psy8758         155 IYHTKRMQHVTHTVWS-LDNKFVI  177 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s-~~~~~l~  177 (198)
                      .+..+ ...+++++|. |+.+.|+
T Consensus       219 ~i~~p-~~~~t~~~fgg~~~~~L~  241 (246)
T PF08450_consen  219 EIELP-VPRPTNCAFGGPDGKTLY  241 (246)
T ss_dssp             EEE-S-SSSEEEEEEESTTSSEEE
T ss_pred             EEcCC-CCCEEEEEEECCCCCEEE
Confidence            77544 3589999994 5655444

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.92  E-value=1.1e-07  Score=70.63  Aligned_cols=156  Identities=15%  Similarity=0.152  Sum_probs=98.9

Q ss_pred             ceeEEEECCCCceEEEee---CC-CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISAS---DE-MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~---~d-~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~   76 (198)
                      .+..-+|+|+++.++..+   .. ..+.++++++++....+..   ...-...+|+|||+.++.+...|+.  |+++|+.
T Consensus       194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~---~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~  270 (425)
T COG0823         194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNF---NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLD  270 (425)
T ss_pred             ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeecc---CCccCCccCCCCCCEEEEEECCCCCccEEEEcCC
Confidence            345668999998765542   22 3588999988876555543   3334567899999999998877765  4444544


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CC--cEEEEEcCCCcee
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DK--SLRLYLAHQGHSR  153 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~--~v~v~d~~~~~~~  153 (198)
                      ..                               .+..+....+.-..-.|+|||++++..+. .|  .|.+++.+.+...
T Consensus       271 ~~-------------------------------~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~  319 (425)
T COG0823         271 GK-------------------------------NLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT  319 (425)
T ss_pred             CC-------------------------------cceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee
Confidence            32                               23334433333446789999998886654 34  5667777766654


Q ss_pred             eEEeccCcccEEEEEEcCCCCEEEEecC-CCe--EEEEecCCCc
Q psy8758         154 DIYHTKRMQHVTHTVWSLDNKFVISASD-EMN--LRVWKAHASE  194 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~--v~~w~~~~~~  194 (198)
                      ......  ..-....|+|||++++..+. +|.  |.+.++.++.
T Consensus       320 riT~~~--~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~  361 (425)
T COG0823         320 RLTFSG--GGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG  361 (425)
T ss_pred             EeeccC--CCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence            433222  22227789999998886653 344  6666665544

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.90  E-value=3.3e-07  Score=67.70  Aligned_cols=173  Identities=12%  Similarity=0.043  Sum_probs=102.4

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc------
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV------   84 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~------   84 (198)
                      ..++.++.++.+..+|..+++............   ........  +..++ .+..++.+..+|.++....+..      
T Consensus       146 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~-~~~~~g~v~ald~~tG~~~W~~~~~~~~  222 (377)
T TIGR03300       146 GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVL-VGFAGGKLVALDLQTGQPLWEQRVALPK  222 (377)
T ss_pred             CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEE-EECCCCEEEEEEccCCCEeeeeccccCC
Confidence            455666677888888887776544332211000   00011111  23343 3456788888887655432210      


Q ss_pred             ----------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          85 ----------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        85 ----------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                                      -.+..++.++.++.+..+|..+ ++.+..... . ....+.  .++..++.++.+|.+..+|..
T Consensus       223 g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~t-G~~~W~~~~-~-~~~~p~--~~~~~vyv~~~~G~l~~~d~~  297 (377)
T TIGR03300       223 GRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRS-GRVLWKRDA-S-SYQGPA--VDDNRLYVTDADGVVVALDRR  297 (377)
T ss_pred             CCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCC-CcEEEeecc-C-CccCce--EeCCEEEEECCCCeEEEEECC
Confidence                            0123466677889999999987 555544431 1 111222  246678888889999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++.+............+...  .+..+++++.+|.++++|.++|+.+
T Consensus       298 tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~  343 (377)
T TIGR03300       298 SGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFV  343 (377)
T ss_pred             CCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence            998765441111112222222  4568888899999999999999875

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2041|consensus

Probab=98.89  E-value=2.5e-08  Score=76.07  Aligned_cols=157  Identities=11%  Similarity=0.127  Sum_probs=106.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee---ee---------eeee-eecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL---GP---------IRKV-VMSLRSNMVSWNPMEAFVFTAANEDFN   69 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~---~~---------~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~   69 (198)
                      ...|++|+.+..+++.|+.||.+++..+.+...-   ..         -+.. .|...|.-+.|+.+.+.+- ++..+|-
T Consensus        16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLT-tSDt~Gl   94 (1189)
T KOG2041|consen   16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLT-TSDTSGL   94 (1189)
T ss_pred             eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccccc-ccCCCce
Confidence            5689999999999999999999999988643210   00         0111 1455666677776655553 3345555


Q ss_pred             EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          70 LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        70 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      |.+|-+                             .. +.-....  ...++.|.+|+|+.||..++..-.||.|.+=.+
T Consensus        95 IiVWml-----------------------------yk-gsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv  144 (1189)
T KOG2041|consen   95 IIVWML-----------------------------YK-GSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV  144 (1189)
T ss_pred             EEEEee-----------------------------ec-ccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence            555554                             33 3333222  234667899999999999999999999888777


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ...+.-..-..+  .....+.|++|.+.++.+-.+|.++++|.+.
T Consensus       145 dGNRIwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqg  187 (1189)
T KOG2041|consen  145 DGNRIWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQG  187 (1189)
T ss_pred             ccceecchhcch--heccceeecccHHHHHhhhcCCcEEEecccc
Confidence            654432221112  3455789999999888888899999998753

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.89  E-value=3.1e-06  Score=58.41  Aligned_cols=172  Identities=15%  Similarity=0.026  Sum_probs=107.9

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc-c-----
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV-H-----   85 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~-~-----   85 (198)
                      ++..+++++.++.+..||..+++.......   ...+.... ...+..+++. ..++.+..+|..+.+..... .     
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~---~~~~~~~~-~~~~~~v~v~-~~~~~l~~~d~~tG~~~W~~~~~~~~~  109 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL---PGPISGAP-VVDGGRVYVG-TSDGSLYALDAKTGKVLWSIYLTSSPP  109 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEEC---SSCGGSGE-EEETTEEEEE-ETTSEEEEEETTTSCEEEEEEE-SSCT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeec---ccccccee-eecccccccc-cceeeeEecccCCcceeeeeccccccc
Confidence            566677778999999999999986554443   22222211 2234445443 36778888887665543331 0     


Q ss_pred             -----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcc----------e-EEEEEccCCCEEEEeecCCc-E
Q psy8758          86 -----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA----------V-TSVDYSPTGREFVAGGYDKS-L  142 (198)
Q Consensus        86 -----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----------i-~~~~~sp~~~~l~~~~~d~~-v  142 (198)
                                 .+..++.+..++.+..+|+++ ++.+.........          + ..+.+. ++ .+..++.++. +
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~  186 (238)
T PF13360_consen  110 AGVRSSSSPAVDGDRLYVGTSSGKLVALDPKT-GKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGRVV  186 (238)
T ss_dssp             CSTB--SEEEEETTEEEEEETCSEEEEEETTT-TEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTSSEE
T ss_pred             cccccccCceEecCEEEEEeccCcEEEEecCC-CcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCCeEE
Confidence                       123467777799999999998 6776666443321          1 222232 44 6666677775 5


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+ |+.+++.+... ..  ..+.. ...+++..|+.++.++.+..||+++|+.+
T Consensus       187 ~~-d~~tg~~~w~~-~~--~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~tG~~~  235 (238)
T PF13360_consen  187 AV-DLATGEKLWSK-PI--SGIYS-LPSVDGGTLYVTSSDGRLYALDLKTGKVV  235 (238)
T ss_dssp             EE-ETTTTEEEEEE-CS--S-ECE-CEECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred             EE-ECCCCCEEEEe-cC--CCccC-CceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence            55 99999866432 21  22322 13466777777778999999999999875

...

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.89  E-value=1.9e-06  Score=70.06  Aligned_cols=183  Identities=9%  Similarity=0.166  Sum_probs=113.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEE----EccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVW----KAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR-   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-   76 (198)
                      ..|.++.+-++...++.+..+|.|.+.    +..+.. ...+..  ....|.+++||||++.++.+. .++++.+.+-. 
T Consensus        76 ~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~--vd~GI~a~~WSPD~Ella~vT-~~~~l~~mt~~f  151 (928)
T PF04762_consen   76 DKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGS--VDSGILAASWSPDEELLALVT-GEGNLLLMTRDF  151 (928)
T ss_pred             CcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEE--EcCcEEEEEECCCcCEEEEEe-CCCEEEEEeccc
Confidence            357888999999989899999999998    443322 233333  367799999999999998864 56776665321 


Q ss_pred             --------------C----------CCCcc-------------------------ccccC----------ceEEEecC--
Q psy8758          77 --------------Q----------LNSPL-------------------------NVHKD----------MTSAAANE--   95 (198)
Q Consensus        77 --------------~----------~~~~~-------------------------~~~~~----------~~~~~~~~--   95 (198)
                                    .          ....+                         .....          .++++.+-  
T Consensus       152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~  231 (928)
T PF04762_consen  152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEP  231 (928)
T ss_pred             eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEc
Confidence                          0          00000                         00001          12222221  


Q ss_pred             ----CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCCceeeEE--e-ccCcccEE
Q psy8758          96 ----DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQGHSRDIY--H-TKRMQHVT  165 (198)
Q Consensus        96 ----~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~~~~~~~--~-~~~~~~v~  165 (198)
                          -..+++|+-+  +......+.-.+--.+++|-|.|+++|+.-.   ...|.+|.-+. .....+  . ......|.
T Consensus       232 ~~~~~R~iRVy~Re--G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNG-LrhgeF~l~~~~~~~~v~  308 (928)
T PF04762_consen  232 ETGSRRVIRVYSRE--GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNG-LRHGEFTLRFDPEEEKVI  308 (928)
T ss_pred             CCCceeEEEEECCC--ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCC-cEeeeEecCCCCCCceee
Confidence                2457777765  2332233333333457899999999988764   34566665433 222222  1 13456899


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         166 HTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       166 ~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      .+.|++|+..||....|. |.+|-..+
T Consensus       309 ~l~Wn~ds~iLAv~~~~~-vqLWt~~N  334 (928)
T PF04762_consen  309 ELAWNSDSEILAVWLEDR-VQLWTRSN  334 (928)
T ss_pred             EEEECCCCCEEEEEecCC-ceEEEeeC
Confidence            999999999999877555 99997654

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.88  E-value=2.3e-06  Score=63.02  Aligned_cols=184  Identities=11%  Similarity=0.192  Sum_probs=121.0

Q ss_pred             cceeEEEECCCCc--eEEE-----eeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------
Q psy8758           2 QHVTHTVWSLDNK--FVIS-----ASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------   65 (198)
Q Consensus         2 ~~v~~~~~s~~~~--~l~~-----~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------   65 (198)
                      ..|...+|+|.++  .|+.     .+..+.+++|.+..+..+..-.-.  ...-..+.|++.|+++++-..         
T Consensus       174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf--k~~~~qLkW~~~g~~ll~l~~t~~ksnKsy  251 (561)
T COG5354         174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF--KVSGVQLKWQVLGKYLLVLVMTHTKSNKSY  251 (561)
T ss_pred             cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE--eecccEEEEecCCceEEEEEEEeeecccce
Confidence            3577888999753  4443     356789999999865543333222  222357899999988765321         


Q ss_pred             -CCccEEEEeccCCCCccc-------------cccC-ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC
Q psy8758          66 -EDFNLYSYDIRQLNSPLN-------------VHKD-MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        66 -~d~~i~~~d~~~~~~~~~-------------~~~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~  130 (198)
                       ...++++++++....+..             ++.. ..+++|.....+.++|++.  .....+  ....-+.+.|+|.+
T Consensus       252 fgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~--Nl~~~~--Pe~~rNT~~fsp~~  327 (561)
T COG5354         252 FGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG--NLRFYF--PEQKRNTIFFSPHE  327 (561)
T ss_pred             eccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeeccccc--ceEEec--CCcccccccccCcc
Confidence             124577777764332221             2222 3466778899999999985  333333  34555778999999


Q ss_pred             CEEEEeecC---CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec------CCCeEEEEecCCC
Q psy8758         131 REFVAGGYD---KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS------DEMNLRVWKAHAS  193 (198)
Q Consensus       131 ~~l~~~~~d---~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~v~~w~~~~~  193 (198)
                      ++++.++-|   |.+.+||............+  ....-+.|+||++++.+..      .|+.+.|||+...
T Consensus       328 r~il~agF~nl~gni~i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~  397 (561)
T COG5354         328 RYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGA  397 (561)
T ss_pred             cEEEEecCCccccceEEeccCCceEEEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEecCc
Confidence            999987765   68999998876554422123  2445578999999887653      4788999998543

>KOG3914|consensus

Probab=98.88  E-value=2.7e-08  Score=70.53  Aligned_cols=82  Identities=18%  Similarity=0.174  Sum_probs=64.0

Q ss_pred             eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcce
Q psy8758          43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAV  121 (198)
Q Consensus        43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i  121 (198)
                      .|-..+..++|+||+++++++ ..|..|++-.....                              ..+..+ -+|+.-|
T Consensus       149 GhvSml~dVavS~D~~~Iita-DRDEkIRvs~ypa~------------------------------f~IesfclGH~eFV  197 (390)
T KOG3914|consen  149 GHVSMLLDVAVSPDDQFIITA-DRDEKIRVSRYPAT------------------------------FVIESFCLGHKEFV  197 (390)
T ss_pred             hhhhhhheeeecCCCCEEEEe-cCCceEEEEecCcc------------------------------cchhhhccccHhhe
Confidence            356678899999999888774 78888888776643                              233333 4688899


Q ss_pred             EEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758         122 TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       122 ~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      ..+++-++ ..|++++.|+++++||+.+++.+..+
T Consensus       198 S~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~  231 (390)
T KOG3914|consen  198 STISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTC  231 (390)
T ss_pred             eeeeeccC-ceeeecCCCCcEEEEecccCCccccc
Confidence            99999765 55899999999999999999877544

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.82  E-value=2.1e-06  Score=62.11  Aligned_cols=114  Identities=11%  Similarity=0.007  Sum_probs=79.1

Q ss_pred             CCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEEEeccC
Q psy8758          12 DNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYSYDIRQ   77 (198)
Q Consensus        12 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~~d~~~   77 (198)
                      +++++++....     ++|.+.|..+.+.+..+..-   .....+ ++||++.++++.+         .+..|.+||..+
T Consensus        11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G---~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t   86 (352)
T TIGR02658        11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGG---FLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT   86 (352)
T ss_pred             CCCEEEEECCcccccCceEEEEECCCCEEEEEEEcc---CCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECcc
Confidence            55556555433     89999999888766666542   233344 9999999998876         555666666655


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCC-------cceEEEEEccCCCEEEEee-c-CCcEEEEEcC
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-------SAVTSVDYSPTGREFVAGG-Y-DKSLRLYLAH  148 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~~~-~-d~~v~v~d~~  148 (198)
                                                    .+.+..+....       .....++++|||++|++.. . ++.|.+.|+.
T Consensus        87 ------------------------------~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~  136 (352)
T TIGR02658        87 ------------------------------HLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE  136 (352)
T ss_pred             ------------------------------CcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECC
Confidence                                          35554443211       1234789999999998776 3 6899999999


Q ss_pred             CCceeeEEecc
Q psy8758         149 QGHSRDIYHTK  159 (198)
Q Consensus       149 ~~~~~~~~~~~  159 (198)
                      +++.+..+..+
T Consensus       137 ~~kvv~ei~vp  147 (352)
T TIGR02658       137 GKAFVRMMDVP  147 (352)
T ss_pred             CCcEEEEEeCC
Confidence            99988877443

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.81  E-value=4.2e-06  Score=68.12  Aligned_cols=188  Identities=11%  Similarity=0.125  Sum_probs=110.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEcc-------------CC----------ceeeeee------------eee---
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAH-------------AS----------EKLGPIR------------KVV---   43 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-------------~~----------~~~~~~~------------~~~---   43 (198)
                      ..|.+++||||++.++..+.++++.+..-.             -+          +....++            ...   
T Consensus       121 ~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~  200 (928)
T PF04762_consen  121 SGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPK  200 (928)
T ss_pred             CcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCc
Confidence            368999999999999999988888765321             00          0000110            000   


Q ss_pred             -------ecCceeeEEeCCCCCeEEEEec--C---CccEEEEeccCC-----------CCccccccCceEEEecC----C
Q psy8758          44 -------MSLRSNMVSWNPMEAFVFTAAN--E---DFNLYSYDIRQL-----------NSPLNVHKDMTSAAANE----D   96 (198)
Q Consensus        44 -------~~~~v~~~~~~~~~~~~~~~~~--~---d~~i~~~d~~~~-----------~~~~~~~~~~~~~~~~~----~   96 (198)
                             ....-..++|-.||++++++.-  .   -..+++|+-+..           ...+...+..-++++..    .
T Consensus       201 ~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~  280 (928)
T PF04762_consen  201 VDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDR  280 (928)
T ss_pred             cccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCC
Confidence                   1123457889999999887642  2   257889986521           11222222222333322    2


Q ss_pred             CcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce--eeEEeccCcccEEEEEEcCC
Q psy8758          97 FNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS--RDIYHTKRMQHVTHTVWSLD  172 (198)
Q Consensus        97 ~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~--~~~~~~~~~~~v~~~~~s~~  172 (198)
                      ..|.+|.-.....-...++  .....+..+.|++|+..||..-.|. |.+|-......  .+.+.......+..+.|+|.
T Consensus       281 ~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe  359 (928)
T PF04762_consen  281 HDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPE  359 (928)
T ss_pred             cEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCC
Confidence            4466666442211112222  3456789999999999999977555 99999888653  22232233344556999995


Q ss_pred             C-CEEEEecCCCeEEEEec
Q psy8758         173 N-KFVISASDEMNLRVWKA  190 (198)
Q Consensus       173 ~-~~l~~~~~dg~v~~w~~  190 (198)
                      . ..|...+.+|.+..+++
T Consensus       360 ~p~~L~v~t~~g~~~~~~~  378 (928)
T PF04762_consen  360 KPLRLHVLTSNGQYEIYDF  378 (928)
T ss_pred             CCCEEEEEecCCcEEEEEE
Confidence            4 45666666666655443

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.81  E-value=6.7e-07  Score=68.31  Aligned_cols=178  Identities=12%  Similarity=0.028  Sum_probs=111.4

Q ss_pred             EEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe---cCCccEEEEeccCCCCcc
Q psy8758           7 TVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA---NEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         7 ~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~d~~i~~~d~~~~~~~~   82 (198)
                      +-++|||+.+...+ ..+.+.+.|.++.+....+..   ......+.++|+++++++++   ....++...+.......+
T Consensus       198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V---dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~v  274 (635)
T PRK02888        198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV---DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVV  274 (635)
T ss_pred             cccCCCCCEeecccceeEEEEEEECccceEEEEEEe---CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEE
Confidence            34566776554333 345677777776554444333   34556789999999999875   122334444433222111


Q ss_pred             ccc---------cCceEEEecCCCcEEEEEccC----CCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcC
Q psy8758          83 NVH---------KDMTSAAANEDFNLYSYDIRQ----LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAH  148 (198)
Q Consensus        83 ~~~---------~~~~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~  148 (198)
                      ..+         .+.....  .+++|.+.|.++    ....+..+. -......+.++|||+++++++. ++++.|+|+.
T Consensus       275 vfni~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~  351 (635)
T PRK02888        275 VFNIARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVR  351 (635)
T ss_pred             EEchHHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEECh
Confidence            111         1112222  367899999886    223344443 3456788999999998877665 8999999998


Q ss_pred             CCce------------eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         149 QGHS------------RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       149 ~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      +.+.            ......  .......+|.++|....+.--|..|..||+.+
T Consensus       352 k~k~~~~~~~~~~~~vvaevev--GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        352 KLDDLFDGKIKPRDAVVAEPEL--GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             hhhhhhhccCCccceEEEeecc--CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            8553            222222  24556788999998777888899999999875

>KOG2041|consensus

Probab=98.79  E-value=1.1e-06  Score=67.48  Aligned_cols=182  Identities=12%  Similarity=0.090  Sum_probs=116.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      +.|.-+.|+.+.+.|-+...+|.|.+|-+..+.-...........-|.+++|+.+|..+..+ ..||.|.+=.+....  
T Consensus        72 ~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIv-YeDGavIVGsvdGNRIw  150 (1189)
T KOG2041|consen   72 ASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIV-YEDGAVIVGSVDGNRIW  150 (1189)
T ss_pred             ceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEE-EccCCEEEEeeccceec
Confidence            56888999999999999999999999999877644444433445668899999999888665 466666543222100  


Q ss_pred             ------Cc----------------------------------------c-------------------------ccccCc
Q psy8758          80 ------SP----------------------------------------L-------------------------NVHKDM   88 (198)
Q Consensus        80 ------~~----------------------------------------~-------------------------~~~~~~   88 (198)
                            ..                                        +                         .....+
T Consensus       151 gKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP  230 (1189)
T KOG2041|consen  151 GKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRP  230 (1189)
T ss_pred             chhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCC
Confidence                  00                                        0                         000113


Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC---------cEEEEEcCCCceeeEEecc
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK---------SLRLYLAHQGHSRDIYHTK  159 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~---------~v~v~d~~~~~~~~~~~~~  159 (198)
                      .++.+..+|.+.+..-.+...|...-.+  -.+....|+|+|..|+.++.+.         .|.+|.. -|+.+..+ .-
T Consensus       231 ~lavcy~nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtl-kv  306 (1189)
T KOG2041|consen  231 RLAVCYANGRMQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTL-KV  306 (1189)
T ss_pred             EEEEEEcCceehhhhhcCCCCCeEEecc--cEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEE-ec
Confidence            5777778887777766554444443332  5678899999999999988642         4555443 34444444 23


Q ss_pred             CcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         160 RMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       160 ~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ....|++++|-..|-.+|.+ .|+.|++=+
T Consensus       307 pg~~It~lsWEg~gLriA~A-vdsfiyfan  335 (1189)
T KOG2041|consen  307 PGSCITGLSWEGTGLRIAIA-VDSFIYFAN  335 (1189)
T ss_pred             CCceeeeeEEcCCceEEEEE-ecceEEEEe
Confidence            34678888887666555543 244444433

>KOG2066|consensus

Probab=98.75  E-value=6.1e-07  Score=69.25  Aligned_cols=143  Identities=12%  Similarity=0.180  Sum_probs=101.7

Q ss_pred             CceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc-----cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcc
Q psy8758          46 LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-----VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA  120 (198)
Q Consensus        46 ~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  120 (198)
                      ..+.+.+++  ++.++ -|..+|.+++++.........     .+.+.++++|+.||++.+-.+.+ .+...++. ...+
T Consensus        40 D~is~~av~--~~~~~-~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~-~~~~~~~d-f~rp  114 (846)
T KOG2066|consen   40 DAISCCAVH--DKFFA-LGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFT-DDEITQYD-FKRP  114 (846)
T ss_pred             hHHHHHHhh--cceee-eccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccC-CccceeEe-cCCc
Confidence            345566655  34444 478899999999875432222     34678999999999999999887 34444443 5678


Q ss_pred             eEEEEEccC-----CCEEEEeecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         121 VTSVDYSPT-----GREFVAGGYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       121 i~~~~~sp~-----~~~l~~~~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +.+++++|+     .+.+++|+.-| +.++.-+-- ...........++|.++.|.  |.++|-++.+| |++||+.+++
T Consensus       115 iksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~  190 (846)
T KOG2066|consen  115 IKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQ  190 (846)
T ss_pred             ceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccc
Confidence            999999998     56889999888 777765431 11122223445899999995  67999988776 9999999887


Q ss_pred             ccc
Q psy8758         195 KLE  197 (198)
Q Consensus       195 ~~~  197 (198)
                      .+.
T Consensus       191 ~l~  193 (846)
T KOG2066|consen  191 RLT  193 (846)
T ss_pred             eee
Confidence            653

>KOG2066|consensus

Probab=98.72  E-value=1.8e-06  Score=66.81  Aligned_cols=74  Identities=12%  Similarity=0.199  Sum_probs=53.9

Q ss_pred             eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc-----ccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         113 VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM-----QHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       113 ~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      .+....++|.++.|.  |.++|-++.+| |++||+.+++.+..+...+.     .....+.|.++.++++  +...+|++
T Consensus       155 ~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI--GW~d~v~i  229 (846)
T KOG2066|consen  155 VLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI--GWGDSVKI  229 (846)
T ss_pred             eeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE--ecCCeEEE
Confidence            345567899999995  78999998887 89999999888777644442     1245678887766543  34557888


Q ss_pred             EecC
Q psy8758         188 WKAH  191 (198)
Q Consensus       188 w~~~  191 (198)
                      ..++
T Consensus       230 ~~I~  233 (846)
T KOG2066|consen  230 CSIK  233 (846)
T ss_pred             EEEe
Confidence            8877

>KOG1275|consensus

Probab=98.71  E-value=3.4e-07  Score=71.64  Aligned_cols=152  Identities=9%  Similarity=0.084  Sum_probs=100.8

Q ss_pred             CCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceE
Q psy8758          11 LDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS   90 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~   90 (198)
                      .+++.+.+|...|+|.+-|..+.+...++..|  .+.+..  |+-.|+.|+++| ....-..+                 
T Consensus       185 ~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH--s~siSD--fDv~GNlLitCG-~S~R~~~l-----------------  242 (1118)
T KOG1275|consen  185 YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAH--SGSISD--FDVQGNLLITCG-YSMRRYNL-----------------  242 (1118)
T ss_pred             ecCcEEEeecccceEEeecCCcCceeeeeecc--ccceee--eeccCCeEEEee-cccccccc-----------------
Confidence            36678888888999999998877776776654  555544  555688888876 32221111                 


Q ss_pred             EEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEEEcC---CCceeeEEeccCcccEEE
Q psy8758          91 AAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAH---QGHSRDIYHTKRMQHVTH  166 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~---~~~~~~~~~~~~~~~v~~  166 (198)
                         ..|..|++||+|. -+.+..+.-+.+ ..-+.|+|. -..+++++..|...+-|..   ....-..........+..
T Consensus       243 ---~~D~FvkVYDLRm-mral~PI~~~~~-P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~  317 (1118)
T KOG1275|consen  243 ---AMDPFVKVYDLRM-MRALSPIQFPYG-PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISA  317 (1118)
T ss_pred             ---cccchhhhhhhhh-hhccCCcccccC-chhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCccee
Confidence               1345567777765 233333322222 256778886 4578888889999999943   322211111233456999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEEe
Q psy8758         167 TVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       167 ~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      +++|++++.++.+..+|.|.+|.
T Consensus       318 fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  318 FDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             EEecCCCceEEEecccCcEeeec
Confidence            99999999999999999999997

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.71  E-value=2.3e-05  Score=54.55  Aligned_cols=78  Identities=10%  Similarity=0.182  Sum_probs=55.0

Q ss_pred             CcceEEEEEccCCCEEE-EeecCCcEEEEEcCCCce----eeEE-e-ccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         118 TSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHS----RDIY-H-TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~-~~~~d~~v~v~d~~~~~~----~~~~-~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      -...+.|+|+|+++.|+ +-+..+.|..|++.....    ...+ . ....+..-.+++..+|++.++....+.|.+++.
T Consensus       133 ~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p  212 (246)
T PF08450_consen  133 LGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP  212 (246)
T ss_dssp             ESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET
T ss_pred             cccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC
Confidence            34568999999999765 556778899999964322    1112 1 111134788999999998887778899999998


Q ss_pred             CCCccc
Q psy8758         191 HASEKL  196 (198)
Q Consensus       191 ~~~~~~  196 (198)
                      + |+.+
T Consensus       213 ~-G~~~  217 (246)
T PF08450_consen  213 D-GKLL  217 (246)
T ss_dssp             T-SCEE
T ss_pred             C-ccEE
Confidence            7 6654

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.71  E-value=1e-05  Score=59.94  Aligned_cols=176  Identities=14%  Similarity=0.029  Sum_probs=103.0

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCce-eeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc-----
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH-----   85 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~-----   85 (198)
                      .+..+++++.++.+..+|..+++..-.....   ..+ ..+..  ++..+++ ++.++.+..+|..+.+......     
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~---~~~~~~p~v--~~~~v~v-~~~~g~l~ald~~tG~~~W~~~~~~~~  137 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLD---ERLSGGVGA--DGGLVFV-GTEKGEVIALDAEDGKELWRAKLSSEV  137 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCC---CCcccceEE--cCCEEEE-EcCCCEEEEEECCCCcEeeeeccCcee
Confidence            3567788888999999999888765443321   111 12222  3556655 4678999999987655332211     


Q ss_pred             ------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcce-----EEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758          86 ------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAV-----TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus        86 ------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i-----~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                            .+..++.+..++.+..+|.++ ++.+..........     .+....  +..++.+..++.+..+|..+|+.+.
T Consensus       138 ~~~p~v~~~~v~v~~~~g~l~a~d~~t-G~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W  214 (377)
T TIGR03300       138 LSPPLVANGLVVVRTNDGRLTALDAAT-GERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLW  214 (377)
T ss_pred             ecCCEEECCEEEEECCCCeEEEEEcCC-CceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEee
Confidence                  123466677899999999987 56655544322211     111111  3467778888999999999887665


Q ss_pred             EEeccCcc------cEEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         155 IYHTKRMQ------HVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       155 ~~~~~~~~------~v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ........      .+..+.-+|  .+..++.++.+|.++.+|.++|+.+
T Consensus       215 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~  264 (377)
T TIGR03300       215 EQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVL  264 (377)
T ss_pred             eeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEE
Confidence            43211000      000000011  2345666667777888887777653

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.68  E-value=1e-05  Score=56.92  Aligned_cols=151  Identities=12%  Similarity=0.037  Sum_probs=101.5

Q ss_pred             eeEEEECC-CCceEEEeeCCCe-EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           4 VTHTVWSL-DNKFVISASDEMN-LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~-~~~~l~~~~~d~~-i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...++.+| .+..++.+-.-|. ..+||..+++....+.........-.-.|+|||++|+++- .|       .      
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTE-nd-------~------   72 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTE-ND-------Y------   72 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEec-cc-------c------
Confidence            46788899 5566666665554 5689999998776665433222223678999999999863 22       0      


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee------------------cCCcEE
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG------------------YDKSLR  143 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~------------------~d~~v~  143 (198)
                                 .+..|.|-+||....-..+..+..+.-....+.+.|||+.|+++.                  ++..+.
T Consensus        73 -----------~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~  141 (305)
T PF07433_consen   73 -----------ETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLV  141 (305)
T ss_pred             -----------CCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceE
Confidence                       113344555555532456667777766677889999998777653                  234577


Q ss_pred             EEEcCCCceeeEEe---ccCcccEEEEEEcCCCCEEEEe
Q psy8758         144 LYLAHQGHSRDIYH---TKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       144 v~d~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      +.|..+|+.+....   ..|.-.++.+++.++|..++..
T Consensus       142 ~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~  180 (305)
T PF07433_consen  142 YLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAM  180 (305)
T ss_pred             EEecCCCceeeeeecCccccccceeeEEecCCCcEEEEE
Confidence            77888888776642   2356689999999998866654

>KOG2114|consensus

Probab=98.66  E-value=1.1e-05  Score=63.20  Aligned_cols=182  Identities=12%  Similarity=0.100  Sum_probs=113.1

Q ss_pred             EECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc----cEEEEeccCCC--C-
Q psy8758           8 VWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF----NLYSYDIRQLN--S-   80 (198)
Q Consensus         8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~----~i~~~d~~~~~--~-   80 (198)
                      .|++.+..++.|+.+|.|.+++-. -+....++...+. -+..+....+...+++.|-.++    .+++|++....  . 
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~s-iv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s  107 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQS-IVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS  107 (933)
T ss_pred             EEcCCCceEEEeeccccEEEeccc-ceeeehheecchh-hhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence            478888999999999998777632 2222445554333 2444433444467777664433    58999987432  1 


Q ss_pred             c--c-----cccc----------------CceEEEecCCCcEEEEEc---cCCCcceeeecCCCcceEEEEEccCCCEEE
Q psy8758          81 P--L-----NVHK----------------DMTSAAANEDFNLYSYDI---RQLNSPLNVHKDMTSAVTSVDYSPTGREFV  134 (198)
Q Consensus        81 ~--~-----~~~~----------------~~~~~~~~~~~~i~~~d~---~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~  134 (198)
                      +  +     ..+.                -..++.|-.+|.|..+.=   +..+....-......+|+.+++..+++.++
T Consensus       108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~l  187 (933)
T KOG2114|consen  108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVL  187 (933)
T ss_pred             cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeE
Confidence            1  1     0111                124788889999988852   221222222234567899999998888633


Q ss_pred             EeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         135 AGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ....-..|.+|.+....+.......|+..+.+..+++....+++++ +..+.+|+.+.
T Consensus       188 Fv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~  244 (933)
T KOG2114|consen  188 FVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDG  244 (933)
T ss_pred             EEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCC
Confidence            3344567999999854433333467778899999988666444443 45688888764

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.66  E-value=3.2e-05  Score=53.37  Aligned_cols=166  Identities=18%  Similarity=0.110  Sum_probs=101.6

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEE--eCCCCCeEEEEecCCccEEEEeccCCCCccc-----------cccCc
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVS--WNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-----------VHKDM   88 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~-----------~~~~~   88 (198)
                      +|.|..+|..+++.+.......   ......  ..+++..++++ +.++.+..+|..+.+....           ...+.
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~---~~~~~~~~~~~~~~~v~~~-~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~   77 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGP---GIGGPVATAVPDGGRVYVA-SGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGG   77 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSS---SCSSEEETEEEETTEEEEE-ETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETT
T ss_pred             CCEEEEEECCCCCEEEEEECCC---CCCCccceEEEeCCEEEEE-cCCCEEEEEECCCCCEEEEeeccccccceeeeccc
Confidence            6789999998887665553311   111222  23356666665 5889999999866543211           11233


Q ss_pred             eEEEecCCCcEEEEEccCCCcceeee-cCCC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcc--
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVH-KDMT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ--  162 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~--  162 (198)
                      .++.+..++.++.+|.++ ++.+... ....   .....+....++..++.+..++.|..+|+++|+.+.........  
T Consensus        78 ~v~v~~~~~~l~~~d~~t-G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~  156 (238)
T PF13360_consen   78 RVYVGTSDGSLYALDAKT-GKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGS  156 (238)
T ss_dssp             EEEEEETTSEEEEEETTT-SCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS
T ss_pred             ccccccceeeeEecccCC-cceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCC
Confidence            456666888999999888 6776663 2221   11223334444788888888999999999999998776432211  


Q ss_pred             -------cE-EEEEEcCCCCEEEEecCCCe-EEEEecCCCcc
Q psy8758         163 -------HV-THTVWSLDNKFVISASDEMN-LRVWKAHASEK  195 (198)
Q Consensus       163 -------~v-~~~~~s~~~~~l~~~~~dg~-v~~w~~~~~~~  195 (198)
                             .+ ..+.+. ++ .++.++.++. +.+ |+.+++.
T Consensus       157 ~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~-d~~tg~~  195 (238)
T PF13360_consen  157 SPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAV-DLATGEK  195 (238)
T ss_dssp             --EEEETTEEEEEECC-TT-EEEEECCTSSEEEE-ETTTTEE
T ss_pred             cceeeecccccceEEE-CC-EEEEEcCCCeEEEE-ECCCCCE
Confidence                   11 223333 44 5666666775 555 9998874

...

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.63  E-value=1.9e-06  Score=64.49  Aligned_cols=111  Identities=15%  Similarity=0.189  Sum_probs=74.2

Q ss_pred             eEEEECC-CCceEEEe----eCCCeE----EEEEccCCceeee--eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           5 THTVWSL-DNKFVISA----SDEMNL----RVWKAHASEKLGP--IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         5 ~~~~~s~-~~~~l~~~----~~d~~i----~i~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      .++.||. ++..+.+.    +.+|.+    .+|++..++ ++.  +...+....+.+++++|+.+.++.+ ..||.|.+|
T Consensus       209 l~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~k-lqrvsvtsipL~s~v~~ca~sp~E~kLvlG-C~DgSiiLy  286 (545)
T PF11768_consen  209 LDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNK-LQRVSVTSIPLPSQVICCARSPSEDKLVLG-CEDGSIILY  286 (545)
T ss_pred             EEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCc-eeEEEEEEEecCCcceEEecCcccceEEEE-ecCCeEEEE
Confidence            4566665 33444443    223332    356665433 222  2334466778899999998888774 588888888


Q ss_pred             eccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      |....                                ........-.++.++|+|+|..+++|+..|.+.+||+.-
T Consensus       287 D~~~~--------------------------------~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  287 DTTRG--------------------------------VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL  330 (545)
T ss_pred             EcCCC--------------------------------eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence            87642                                122222345578899999999999999999999999864

>KOG0882|consensus

Probab=98.61  E-value=1.4e-06  Score=63.25  Aligned_cols=191  Identities=13%  Similarity=0.142  Sum_probs=125.5

Q ss_pred             ceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-C---CeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-E---AFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~---~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .|.+++.+-++..+.+.+. |..++++|+.+-.....++....++   .+.|... |   ..++++.-.++.+.++|-..
T Consensus        55 ~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg---~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~  131 (558)
T KOG0882|consen   55 VILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPG---FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFG  131 (558)
T ss_pred             HHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCC---ceEEecCCCCeeeeEEeecccCCCcEEECCcC
Confidence            3556777889999999777 9999999998766544444322222   2333322 2   24555545689999999764


Q ss_pred             CCCc----cccccC-----------ceEEEecCCCcEEEEEccC-CCcce-------------eeecCCCcceEEEEEcc
Q psy8758          78 LNSP----LNVHKD-----------MTSAAANEDFNLYSYDIRQ-LNSPL-------------NVHKDMTSAVTSVDYSP  128 (198)
Q Consensus        78 ~~~~----~~~~~~-----------~~~~~~~~~~~i~~~d~~~-~~~~~-------------~~~~~~~~~i~~~~~sp  128 (198)
                      ...+    ...|..           ...++....|-|..|.... ...+.             ..+.-.+....++.|+|
T Consensus       132 d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp  211 (558)
T KOG0882|consen  132 DFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSP  211 (558)
T ss_pred             CcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEcc
Confidence            4321    111222           2366777788899998772 11111             11122345678999999


Q ss_pred             CCCEEEEeecCCcEEEEEcCCCceeeEEec-------------------------------cCc-ccEEEEEEcCCCCEE
Q psy8758         129 TGREFVAGGYDKSLRLYLAHQGHSRDIYHT-------------------------------KRM-QHVTHTVWSLDNKFV  176 (198)
Q Consensus       129 ~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-------------------------------~~~-~~v~~~~~s~~~~~l  176 (198)
                      ++..+.+-+.|..|+++++++++.++.+..                               .|. ..-..+.|...|++|
T Consensus       212 ~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~fl  291 (558)
T KOG0882|consen  212 DGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFL  291 (558)
T ss_pred             ccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEE
Confidence            999999999999999999998876554411                               111 234567788889999


Q ss_pred             EEecCCCeEEEEecCCCcccc
Q psy8758         177 ISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       177 ~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +.++.=| |++.++.++..++
T Consensus       292 ly~t~~g-ikvin~~tn~v~r  311 (558)
T KOG0882|consen  292 LYGTILG-IKVINLDTNTVVR  311 (558)
T ss_pred             Eeeccee-EEEEEeecCeEEE
Confidence            8887655 8888988877643

>KOG1912|consensus

Probab=98.60  E-value=3.6e-06  Score=65.16  Aligned_cols=162  Identities=14%  Similarity=0.097  Sum_probs=108.5

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV   84 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~   84 (198)
                      .++.|+|.|- ||.|+ ...|.+-|..+-+.++.+..  |...|+.+.|.|.....-. ++..                 
T Consensus        19 ~A~Dw~~~GL-iAygs-hslV~VVDs~s~q~iqsie~--h~s~V~~VrWap~~~p~~l-lS~~-----------------   76 (1062)
T KOG1912|consen   19 NAADWSPSGL-IAYGS-HSLVSVVDSRSLQLIQSIEL--HQSAVTSVRWAPAPSPRDL-LSPS-----------------   76 (1062)
T ss_pred             cccccCccce-EEEec-CceEEEEehhhhhhhhcccc--CccceeEEEeccCCCchhc-cCcc-----------------
Confidence            5678888774 55554 34688888877666666654  4678999999985322111 0100                 


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC---C-CEEEEeecCCcEEEEEcCCCceeeEEeccC
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT---G-REFVAGGYDKSLRLYLAHQGHSRDIYHTKR  160 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~---~-~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~  160 (198)
                      .....++++.-.|.|.+||... ...+..+..+.+++..++|-|.   . ..|+.-....++.+|+..+|+........|
T Consensus        77 ~~~lliAsaD~~GrIil~d~~~-~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~  155 (1062)
T KOG1912|consen   77 SSQLLIASADISGRIILVDFVL-ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSH  155 (1062)
T ss_pred             ccceeEEeccccCcEEEEEehh-hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCC
Confidence            1123456666677777777766 5666677778889999999763   4 366666677899999999999887764343


Q ss_pred             cccEEEEEEcC-CCCEEEEecCCCeEEEEec
Q psy8758         161 MQHVTHTVWSL-DNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       161 ~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~  190 (198)
                       ....++.+.| |.+.+...+..|.+.+.+.
T Consensus       156 -~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~  185 (1062)
T KOG1912|consen  156 -EILSCFRVDPFDSRHFCVLGSKGFVLSCKD  185 (1062)
T ss_pred             -cceeeeeeCCCCcceEEEEccCceEEEEec
Confidence             5667788888 6666665566666666554

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.58  E-value=1.4e-05  Score=62.03  Aligned_cols=160  Identities=10%  Similarity=0.112  Sum_probs=92.3

Q ss_pred             ceeEEEECCCCceEEEee------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISAS------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .+...++||+|+.++...      .|..-.||-...+.....+..   ........|+|++..+.+....+...++.+  
T Consensus       351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~---g~~~t~PsWspDG~~lw~v~dg~~~~~v~~--  425 (591)
T PRK13616        351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLE---GHSLTRPSWSLDADAVWVVVDGNTVVRVIR--  425 (591)
T ss_pred             CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeec---CCCCCCceECCCCCceEEEecCcceEEEec--
Confidence            567889999999887664      244344454332322233322   234678899999998887642222222222  


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE---EEcCCCcee
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL---YLAHQGHSR  153 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v---~d~~~~~~~  153 (198)
                                      ....+.+.+.++.. +....   .....|..+.|||||..++... ++.|.+   -....|. .
T Consensus       426 ----------------~~~~gql~~~~vd~-ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~  483 (591)
T PRK13616        426 ----------------DPATGQLARTPVDA-SAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-Y  483 (591)
T ss_pred             ----------------cCCCceEEEEeccC-chhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-e
Confidence                            12345666666654 33322   3456799999999999887765 467776   4444454 1


Q ss_pred             eE-----EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         154 DI-----YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       154 ~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ..     +...-...+.++.|.+++.++ .+..++...+|.+
T Consensus       484 ~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v  524 (591)
T PRK13616        484 ALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV  524 (591)
T ss_pred             eecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence            11     112222346889999999855 4444443444443

>KOG1008|consensus

Probab=98.57  E-value=2.6e-08  Score=74.86  Aligned_cols=187  Identities=14%  Similarity=0.181  Sum_probs=116.2

Q ss_pred             cceeEEEECCCC--ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe----cCCccEEEEec
Q psy8758           2 QHVTHTVWSLDN--KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA----NEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~~~--~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~d~~i~~~d~   75 (198)
                      +.+.|++++-+.  -.+++|..+|.|-+-.+.............+....++++|++-....+++|    ..|..+.+||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            457788877644  478889999999998876543221122223456678999998655555555    23566899999


Q ss_pred             cCCCC----c--ccc------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEe
Q psy8758          76 RQLNS----P--LNV------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAG  136 (198)
Q Consensus        76 ~~~~~----~--~~~------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~  136 (198)
                      .+...    .  +..            .....+.+|.....+.++|+++.-.....+  .+..+..+..+| .+.++++.
T Consensus       137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~  214 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSN  214 (783)
T ss_pred             ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceecc
Confidence            76521    1  111            112357777788889999988522222222  234566788888 67777776


Q ss_pred             ecCCcEEEEE-cCCCce-eeEE-ec--cCcccEEEEEEcCCCC-EEEEecC-CCeEEEEecC
Q psy8758         137 GYDKSLRLYL-AHQGHS-RDIY-HT--KRMQHVTHTVWSLDNK-FVISASD-EMNLRVWKAH  191 (198)
Q Consensus       137 ~~d~~v~v~d-~~~~~~-~~~~-~~--~~~~~v~~~~~s~~~~-~l~~~~~-dg~v~~w~~~  191 (198)
                      . |+.|.+|| .+.-+. +..+ +.  .....+..++|+|-.. .+++.+. .++|+++++.
T Consensus       215 ~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  215 S-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             c-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            5 99999999 333222 2211 11  1113589999999543 5555554 5789999875

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.56  E-value=2.2e-06  Score=63.81  Aligned_cols=141  Identities=11%  Similarity=0.104  Sum_probs=82.4

Q ss_pred             eEEEECCCCceEEEe-eCCCe--EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           5 THTVWSLDNKFVISA-SDEMN--LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~-~~d~~--i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+|+|||++|+.. ..||.  |.++|+..+...+ +...  .+.-..-.|+|+|+.++.+.+..|.-.+|-.      
T Consensus       241 ~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~--~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~------  311 (425)
T COG0823         241 GAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNG--FGINTSPSWSPDGSKIVFTSDRGGRPQIYLY------  311 (425)
T ss_pred             CCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccC--CccccCccCCCCCCEEEEEeCCCCCcceEEE------
Confidence            346799999877655 45665  4556766555322 2221  2222467899999999998766665333322      


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC-Cc--EEEEEcCCCceeeEEec
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-KS--LRLYLAHQGHSRDIYHT  158 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d-~~--v~v~d~~~~~~~~~~~~  158 (198)
                                           ++.  +.....++.....-..-.|+|||++++..+.. |.  |.+.|+.++.....+  
T Consensus       312 ---------------------~~~--g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l--  366 (425)
T COG0823         312 ---------------------DLE--GSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL--  366 (425)
T ss_pred             ---------------------CCC--CCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc--
Confidence                                 222  22223333332333377899999999877653 44  777777766543332  


Q ss_pred             cCcccEEEEEEcCCCCEEEEe
Q psy8758         159 KRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       159 ~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      ..........|.|+++.+...
T Consensus       367 t~~~~~e~ps~~~ng~~i~~~  387 (425)
T COG0823         367 TSTYLNESPSWAPNGRMIMFS  387 (425)
T ss_pred             cccccCCCCCcCCCCceEEEe
Confidence            222344456777777766543

>KOG1645|consensus

Probab=98.51  E-value=4.1e-06  Score=60.08  Aligned_cols=74  Identities=18%  Similarity=0.140  Sum_probs=61.7

Q ss_pred             ceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .|.+++|||..+ ++..++.+..|+|.|+++......+..   ...+.+++|.-+....+.+|...|-|.+||+++..
T Consensus       195 ~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a---~~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  195 FIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIA---YNQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             hhhhhccCccccceeeeeccCceEEEEecccceeeeheec---cCCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence            478899999877 778889999999999988765555544   36789999999999999989888999999988763

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.50  E-value=4.9e-06  Score=61.33  Aligned_cols=135  Identities=16%  Similarity=0.227  Sum_probs=86.4

Q ss_pred             cceeEEEECCCCceEEEee--CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec--CCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISAS--DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN--EDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~d~~i~~~d~~~   77 (198)
                      ++|...+|+|.++.+++.+  .+-.+.++|+...  +.-..   ....=+.+.|+|.+++++.+|-  ..|.+-+||...
T Consensus       275 ~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~---Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~  349 (561)
T COG5354         275 DPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYF---PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAG  349 (561)
T ss_pred             ccceeeeecccCCceeEEecccccceeecccccc--eEEec---CCcccccccccCcccEEEEecCCccccceEEeccCC
Confidence            5799999999998776654  6778889998654  12111   1233357889999999998762  235566666543


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee------cCCcEEEEEcCCCc
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG------YDKSLRLYLAHQGH  151 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~------~d~~v~v~d~~~~~  151 (198)
                      .                             -.....+.+  ....-+.|+||++++.+..      .|+.+.+||+....
T Consensus       350 r-----------------------------f~~~~~~~~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         350 R-----------------------------FKVAGAFNG--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             c-----------------------------eEEEEEeec--CCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence            2                             122223332  2345578999999887653      37889999986543


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEEEecC
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  181 (198)
                      ..         ..+.+.|.|.+++..+.+.
T Consensus       399 ~f---------el~~~~W~p~~~~~ttsSs  419 (561)
T COG5354         399 VF---------ELTNITWDPSGQYVTTSSS  419 (561)
T ss_pred             hh---------hhhhccccCCcccceeecc
Confidence            32         3445566666665554443

>KOG1912|consensus

Probab=98.49  E-value=2.3e-06  Score=66.22  Aligned_cols=107  Identities=14%  Similarity=0.137  Sum_probs=85.7

Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE---------eecCCcEEEEEcCCCceeeEE--e
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA---------GGYDKSLRLYLAHQGHSRDIY--H  157 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~---------~~~d~~v~v~d~~~~~~~~~~--~  157 (198)
                      .++.|++.|+|.++|+.+ +...+.+..|...|.++.|--..+++-.         ++.-+.+.+-|+++|......  .
T Consensus       439 LvAvGT~sGTV~vvdvst-~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~  517 (1062)
T KOG1912|consen  439 LVAVGTNSGTVDVVDVST-NAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQ  517 (1062)
T ss_pred             eEEeecCCceEEEEEecc-hhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCC
Confidence            588999999999999998 6777788889999999999766554322         222357889999998765543  3


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .....+|..+..|..++||+..-.+.-+.+||+++...+
T Consensus       518 ~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~l  556 (1062)
T KOG1912|consen  518 KPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRML  556 (1062)
T ss_pred             CCCcCcceeeeecccCceEEEEecccchHHHhhccchHH
Confidence            445679999999999999999999999999999876554

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.48  E-value=1.3e-05  Score=61.57  Aligned_cols=107  Identities=10%  Similarity=0.102  Sum_probs=69.8

Q ss_pred             CCeEEEEEccC----CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCC
Q psy8758          22 EMNLRVWKAHA----SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDF   97 (198)
Q Consensus        22 d~~i~i~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~   97 (198)
                      ++.|.+.|..+    +.  ..+...........+.++||++++++++..+..+.++|+.+.+..+...            
T Consensus       295 gn~V~VID~~t~~~~~~--~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~------------  360 (635)
T PRK02888        295 GSKVPVVDGRKAANAGS--ALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGK------------  360 (635)
T ss_pred             CCEEEEEECCccccCCc--ceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhcc------------
Confidence            34577777665    21  1222223355667899999999999998889999999998764433211            


Q ss_pred             cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                       |   +.+.  ......+-..+ ....+|.++|....+-..|..|..||+..
T Consensus       361 -~---~~~~--~vvaevevGlG-PLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        361 -I---KPRD--AVVAEPELGLG-PLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             -C---Cccc--eEEEeeccCCC-cceEEECCCCCEEEeEeecceeEEEehHH
Confidence             1   2221  22233332223 34578999998888888899999999876

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.48  E-value=9.1e-06  Score=59.59  Aligned_cols=64  Identities=25%  Similarity=0.357  Sum_probs=44.8

Q ss_pred             CCCCceEEEe---------eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758          10 SLDNKFVISA---------SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus        10 s~~~~~l~~~---------~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      |||+++++..         +..+.+.+||+.+++. ..+...  ...+....|+|+++.++.+  .++.|++.+....
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~-~~l~~~--~~~~~~~~~sP~g~~~~~v--~~~nly~~~~~~~   73 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEI-TPLTPP--PPKLQDAKWSPDGKYIAFV--RDNNLYLRDLATG   73 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEE-EESS-E--ETTBSEEEE-SSSTEEEEE--ETTEEEEESSTTS
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCce-EECcCC--ccccccceeecCCCeeEEE--ecCceEEEECCCC
Confidence            6888887763         2346788999988653 333322  4567889999999999886  4788999987654

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.45  E-value=5.3e-05  Score=52.21  Aligned_cols=147  Identities=11%  Similarity=0.080  Sum_probs=85.8

Q ss_pred             ceeEEEECCC------CceEEEeeCCCeEEEEEccCC--ceeeeeeeee----ecCceeeEEeCCCCCeEEEEecCCcc-
Q psy8758           3 HVTHTVWSLD------NKFVISASDEMNLRVWKAHAS--EKLGPIRKVV----MSLRSNMVSWNPMEAFVFTAANEDFN-   69 (198)
Q Consensus         3 ~v~~~~~s~~------~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~d~~-   69 (198)
                      +|..+.|-+-      ...|++-..+|.++-|-+..+  +.......+.    ....|.++.++|..+.|+++|..... 
T Consensus        93 Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~  172 (282)
T PF15492_consen   93 AIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQD  172 (282)
T ss_pred             ceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCC
Confidence            4566666442      125666677888887776432  2222222211    35579999999999998887755432 


Q ss_pred             ---------EEEEeccCCCCccccccCceEEEecCCCc------EEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE
Q psy8758          70 ---------LYSYDIRQLNSPLNVHKDMTSAAANEDFN------LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV  134 (198)
Q Consensus        70 ---------i~~~d~~~~~~~~~~~~~~~~~~~~~~~~------i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~  134 (198)
                               +..|.+-.      ..+-...+...++..      ..++.+-+ ...........+.|..|.+||||+.||
T Consensus       173 ~~s~a~~~GLtaWRiL~------~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~-~~~fs~~~~~~d~i~kmSlSPdg~~La  245 (282)
T PF15492_consen  173 GMSKASSCGLTAWRILS------DSPYYKQVTSSEDDITASSKRRGLLRIPS-FKFFSRQGQEQDGIFKMSLSPDGSLLA  245 (282)
T ss_pred             ccccccccCceEEEEcC------CCCcEEEccccCccccccccccceeeccc-eeeeeccccCCCceEEEEECCCCCEEE
Confidence                     22333221      111122222222222      12333222 111111123567899999999999999


Q ss_pred             EeecCCcEEEEEcCCCceeeEE
Q psy8758         135 AGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      +...+|.|.+|++.+-.+....
T Consensus       246 ~ih~sG~lsLW~iPsL~~~~~W  267 (282)
T PF15492_consen  246 CIHFSGSLSLWEIPSLRLQRSW  267 (282)
T ss_pred             EEEcCCeEEEEecCcchhhccc
Confidence            9999999999999987665554

>KOG1920|consensus

Probab=98.45  E-value=6.8e-05  Score=60.96  Aligned_cols=183  Identities=10%  Similarity=0.142  Sum_probs=112.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc------
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR------   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~------   76 (198)
                      .|.++.|..+.+.++.+..+|.|.+-|.++... .....  ....|.+++|+||++.++.. +..+++.+.+-.      
T Consensus        70 ~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~--vd~GI~aaswS~Dee~l~li-T~~~tll~mT~~f~~i~E  145 (1265)
T KOG1920|consen   70 EIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGN--VDNGISAASWSPDEELLALI-TGRQTLLFMTKDFEPIAE  145 (1265)
T ss_pred             ceEEEEEecccceEEEEecCCcEEEEcccccce-eeeee--ccCceEEEeecCCCcEEEEE-eCCcEEEEEeccccchhc
Confidence            577888888888888899999999988766542 22222  35679999999999988776 355666554320      


Q ss_pred             -CC--------C----------Cccccc----------------------c----------CceEEE-----ecCCCcEE
Q psy8758          77 -QL--------N----------SPLNVH----------------------K----------DMTSAA-----ANEDFNLY  100 (198)
Q Consensus        77 -~~--------~----------~~~~~~----------------------~----------~~~~~~-----~~~~~~i~  100 (198)
                       ..        +          ..+.+.                      .          +.++++     .....+++
T Consensus       146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir  225 (1265)
T KOG1920|consen  146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIR  225 (1265)
T ss_pred             cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence             00        0          001100                      0          012332     22337888


Q ss_pred             EEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee---cCCcEEEEEcCCCce---eeEEeccCcccEEEEEEcCCCC
Q psy8758         101 SYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG---YDKSLRLYLAHQGHS---RDIYHTKRMQHVTHTVWSLDNK  174 (198)
Q Consensus       101 ~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~d~~v~v~d~~~~~~---~~~~~~~~~~~v~~~~~s~~~~  174 (198)
                      +||.+.  ..-..-+....-=.+++|-|.|.++++-.   .|+.|.+|.-+.-+.   .... ......+..++|+.++.
T Consensus       226 V~drEg--~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~-p~de~~ve~L~Wns~sd  302 (1265)
T KOG1920|consen  226 VYDREG--ALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPF-PLDEKEVEELAWNSNSD  302 (1265)
T ss_pred             Eecccc--hhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCC-cccccchheeeecCCCC
Confidence            998762  22111222233345799999999888753   356788887654221   1111 12223499999999999


Q ss_pred             EEEE---ecCCCeEEEEecCC
Q psy8758         175 FVIS---ASDEMNLRVWKAHA  192 (198)
Q Consensus       175 ~l~~---~~~dg~v~~w~~~~  192 (198)
                      .||.   ......|++|-+.+
T Consensus       303 iLAv~~~~~e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  303 ILAVVTSNLENSLVQLWTTGN  323 (1265)
T ss_pred             ceeeeecccccceEEEEEecC
Confidence            9887   44455599997754

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.41  E-value=7.9e-05  Score=55.56  Aligned_cols=172  Identities=11%  Similarity=-0.018  Sum_probs=93.8

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc-------
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV-------   84 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~-------   84 (198)
                      .++.+..++.+..+|..+++..-.........   .......  .+..++. +..++.+..+|..+.+.....       
T Consensus       162 ~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~-~~~~g~v~a~d~~~G~~~W~~~~~~~~~  238 (394)
T PRK11138        162 LVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIV-GGDNGRVSAVLMEQGQLIWQQRISQPTG  238 (394)
T ss_pred             EEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEE-EcCCCEEEEEEccCChhhheeccccCCC
Confidence            44455566677777777666543332210000   0000111  1223333 346777777776654322110       


Q ss_pred             ---------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          85 ---------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        85 ---------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                     -.+..++.++.++.+..+|+.+ ++.+.....  .....+.  ..+..++.++.++.+..+|..+
T Consensus       239 ~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~t-G~~~W~~~~--~~~~~~~--~~~~~vy~~~~~g~l~ald~~t  313 (394)
T PRK11138        239 ATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRS-GQIVWKREY--GSVNDFA--VDGGRIYLVDQNDRVYALDTRG  313 (394)
T ss_pred             ccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCC-CCEEEeecC--CCccCcE--EECCEEEEEcCCCeEEEEECCC
Confidence                           0123455667788999999887 555443321  1111122  2456777788899999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.+............+...  .+..|+.++.||.++..|..+|+.+
T Consensus       314 G~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~  358 (394)
T PRK11138        314 GVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFV  358 (394)
T ss_pred             CcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence            87755431111111222222  2456777888999999999999865

>KOG1645|consensus

Probab=98.40  E-value=2e-06  Score=61.55  Aligned_cols=93  Identities=10%  Similarity=0.180  Sum_probs=74.1

Q ss_pred             EEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EE
Q psy8758          99 LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FV  176 (198)
Q Consensus        99 i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l  176 (198)
                      ++..+..+ -+....+..+...|..++|||..+ ++..++.++.|+|.|+++......+. .+ ..+++++|.-|.. ++
T Consensus       175 v~~l~~~~-fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~-a~-~~~wSC~wDlde~h~I  251 (463)
T KOG1645|consen  175 VQKLESHD-FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYI-AY-NQIWSCCWDLDERHVI  251 (463)
T ss_pred             eEEeccCC-cchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehee-cc-CCceeeeeccCCccee
Confidence            45555444 234556677788899999999887 78888999999999999988887774 33 7899999998755 67


Q ss_pred             EEecCCCeEEEEecCCCc
Q psy8758         177 ISASDEMNLRVWKAHASE  194 (198)
Q Consensus       177 ~~~~~dg~v~~w~~~~~~  194 (198)
                      +.|-.+|.|.+||++..+
T Consensus       252 YaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  252 YAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             EEeccCceEEEEEccCCC
Confidence            788889999999998654

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.39  E-value=0.00014  Score=57.89  Aligned_cols=99  Identities=14%  Similarity=0.159  Sum_probs=70.2

Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeec----CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccE
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV  164 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v  164 (198)
                      -.+.|-.+..+..||+|-.+..+..-.    .......|++-+.+| ++|+|+.+|.||+||-. +..-.+..++-+.+|
T Consensus       544 ~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI  621 (794)
T PF08553_consen  544 QTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPI  621 (794)
T ss_pred             ceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeeccc-chhhhhcCCCCCCCe
Confidence            367788888999999997443222111    233456777777666 69999999999999943 333333335656899


Q ss_pred             EEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         165 THTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       165 ~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      .++..+.||++|++.+ +..+.+++.
T Consensus       622 ~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  622 IGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             eEEEecCCCcEEEEee-cceEEEEEE
Confidence            9999999999987655 566777775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4190|consensus

Probab=98.38  E-value=9.3e-07  Score=66.03  Aligned_cols=158  Identities=11%  Similarity=0.187  Sum_probs=95.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEe-cCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAA-NEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~-~~d~~i~~~d~~~~~   79 (198)
                      ++|+++.|-.+-++++++  ||.+++||.--++.+..+......+.+..+..-|+ .+.++.+| +...+++++|.+...
T Consensus       785 k~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce  862 (1034)
T KOG4190|consen  785 KPIHDIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCE  862 (1034)
T ss_pred             Ccccceeeeeccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccccc
Confidence            467888888887777765  78899999876665543332222233333443333 34444433 566777777776542


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~  157 (198)
                      ..                           ...+.-  .+...-+.+++..|.|++++.+-.+|.|.+.|.++|+.+....
T Consensus       863 ~~---------------------------~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswr  915 (1034)
T KOG4190|consen  863 WT---------------------------CELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWR  915 (1034)
T ss_pred             ce---------------------------eeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCC
Confidence            10                           111111  2334568899999999999999999999999999998776552


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCCeEEE-Eec
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEMNLRV-WKA  190 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~-w~~  190 (198)
                      .- ......++ .|..+.|+....|.++.+ |..
T Consensus       916 pm-ecdllqla-apsdq~L~~saldHslaVnWha  947 (1034)
T KOG4190|consen  916 PM-ECDLLQLA-APSDQALAQSALDHSLAVNWHA  947 (1034)
T ss_pred             cc-cchhhhhc-CchhHHHHhhcccceeEeeehh
Confidence            21 11222222 244445555555555555 543

>KOG3621|consensus

Probab=98.37  E-value=3.3e-06  Score=64.50  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=62.3

Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE-----eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY-----HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ....+.....|++..++|.|+..|.|.++.++.+.+....     ...|...|++++|++++..+++|...|+|..-.++
T Consensus        75 ~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~  154 (726)
T KOG3621|consen   75 ATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELD  154 (726)
T ss_pred             ccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEec
Confidence            4556777889999999999999999999999875443322     33467889999999999999999999999888776


Q ss_pred             C
Q psy8758         192 A  192 (198)
Q Consensus       192 ~  192 (198)
                      +
T Consensus       155 s  155 (726)
T KOG3621|consen  155 S  155 (726)
T ss_pred             h
Confidence            6

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.35  E-value=0.00018  Score=53.66  Aligned_cols=172  Identities=11%  Similarity=0.020  Sum_probs=101.5

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCcee-eEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc------
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSN-MVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH------   85 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~------   85 (198)
                      +..++.++.++.+..+|.++++..-.....   ..+. ....  .+..+++ +..++.+..+|.++.+..+...      
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~---~~~~ssP~v--~~~~v~v-~~~~g~l~ald~~tG~~~W~~~~~~~~~  193 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVA---GEALSRPVV--SDGLVLV-HTSNGMLQALNESDGAVKWTVNLDVPSL  193 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccccCC---CceecCCEE--ECCEEEE-ECCCCEEEEEEccCCCEeeeecCCCCcc
Confidence            446677788899999999988865544321   1111 1111  1334444 4567888888877655332211      


Q ss_pred             -----c-----CceEEEecCCCcEEEEEccCCCcceeeecCCCc-------ceEEEEEcc--CCCEEEEeecCCcEEEEE
Q psy8758          86 -----K-----DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS-------AVTSVDYSP--TGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        86 -----~-----~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~i~~~~~sp--~~~~l~~~~~d~~v~v~d  146 (198)
                           .     +..++.++.++.+..+|..+ ++.+........       ....+.-+|  .+..++.++.++.+..+|
T Consensus       194 ~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~-G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald  272 (394)
T PRK11138        194 TLRGESAPATAFGGAIVGGDNGRVSAVLMEQ-GQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALD  272 (394)
T ss_pred             cccCCCCCEEECCEEEEEcCCCEEEEEEccC-ChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEE
Confidence                 1     12356677889999999887 554443321100       011111223  245677777899999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..+++.+.....+   ....+.  ..+..++.++.+|.+..+|..+|+.+
T Consensus       273 ~~tG~~~W~~~~~---~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~  317 (394)
T PRK11138        273 LRSGQIVWKREYG---SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVEL  317 (394)
T ss_pred             CCCCCEEEeecCC---CccCcE--EECCEEEEEcCCCeEEEEECCCCcEE
Confidence            9999876654222   111122  24556667778899999999888754

>KOG1008|consensus

Probab=98.34  E-value=1.8e-07  Score=70.50  Aligned_cols=145  Identities=17%  Similarity=0.252  Sum_probs=92.7

Q ss_pred             cceeEEEECC-CCceEEEee----CCCeEEEEEccCC--cee--eeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           2 QHVTHTVWSL-DNKFVISAS----DEMNLRVWKAHAS--EKL--GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~----~d~~i~i~~~~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      +++++++|++ |.+.||+|-    .|..+.|||+.++  ...  ..+.. .......+++|-.+.+.++ +|.....+.+
T Consensus       103 r~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~-~~l~gqns~cwlrd~klvl-aGm~sr~~~i  180 (783)
T KOG1008|consen  103 RPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSS-STLDGQNSVCWLRDTKLVL-AGMTSRSVHI  180 (783)
T ss_pred             ccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccccc-ccccCccccccccCcchhh-cccccchhhh
Confidence            4678999998 567777773    4678999999865  111  11111 1233456888986655554 5777889999


Q ss_pred             EeccCCCC-c------------cccccCceEEEecCCCcEEEEE-ccCCCcceeeecCCC----cceEEEEEccCCC-EE
Q psy8758          73 YDIRQLNS-P------------LNVHKDMTSAAANEDFNLYSYD-IRQLNSPLNVHKDMT----SAVTSVDYSPTGR-EF  133 (198)
Q Consensus        73 ~d~~~~~~-~------------~~~~~~~~~~~~~~~~~i~~~d-~~~~~~~~~~~~~~~----~~i~~~~~sp~~~-~l  133 (198)
                      +|+++... .            +.+....++++. .|+.+.+|| .++...++..+...+    ..+..++|+|... .+
T Consensus       181 fdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtgll  259 (783)
T KOG1008|consen  181 FDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSN-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLL  259 (783)
T ss_pred             hhhhhhhhhhhhhhhhhcccceecCCCCCceecc-ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchh
Confidence            99984321 1            112223344444 499999999 665555665554332    3489999999744 44


Q ss_pred             EEee-cCCcEEEEEcCC
Q psy8758         134 VAGG-YDKSLRLYLAHQ  149 (198)
Q Consensus       134 ~~~~-~d~~v~v~d~~~  149 (198)
                      ++.. ..++|++||+..
T Consensus       260 a~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  260 AVLSRDSITIRLYDICV  276 (783)
T ss_pred             hhhccCcceEEEecccc
Confidence            4444 457899999874

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.33  E-value=0.0002  Score=53.92  Aligned_cols=131  Identities=11%  Similarity=0.116  Sum_probs=73.6

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE-eccCCC-Cc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY-DIRQLN-SP   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~-d~~~~~-~~   81 (198)
                      ...+.++|+|++++++ .||...|+.....+.    ..   .+....+.|.+.+++.+.  ..+.+|.++ +..... ..
T Consensus        35 p~~ls~npngr~v~V~-g~geY~iyt~~~~r~----k~---~G~g~~~vw~~~n~yAv~--~~~~~I~I~kn~~~~~~k~  104 (443)
T PF04053_consen   35 PQSLSHNPNGRFVLVC-GDGEYEIYTALAWRN----KA---FGSGLSFVWSSRNRYAVL--ESSSTIKIYKNFKNEVVKS  104 (443)
T ss_dssp             -SEEEE-TTSSEEEEE-ETTEEEEEETTTTEE----EE---EEE-SEEEE-TSSEEEEE---TTS-EEEEETTEE-TT--
T ss_pred             CeeEEECCCCCEEEEE-cCCEEEEEEccCCcc----cc---cCceeEEEEecCccEEEE--ECCCeEEEEEcCccccceE
Confidence            4689999999999884 577888888433221    11   122357889986654433  457889886 333221 01


Q ss_pred             ccc-------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          82 LNV-------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        82 ~~~-------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      +..       ..+.++...+. +.|.+||..+ ++.+..+...  +|..+.|+++|++++..+.+ .+.+++.+.
T Consensus       105 i~~~~~~~~If~G~LL~~~~~-~~i~~yDw~~-~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~~  174 (443)
T PF04053_consen  105 IKLPFSVEKIFGGNLLGVKSS-DFICFYDWET-GKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYNL  174 (443)
T ss_dssp             ---SS-EEEEE-SSSEEEEET-TEEEEE-TTT---EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-H
T ss_pred             EcCCcccceEEcCcEEEEECC-CCEEEEEhhH-cceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEecc
Confidence            111       11344444444 4899999998 6777777633  38999999999999988755 577766544

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG4640|consensus

Probab=98.29  E-value=6.3e-06  Score=62.32  Aligned_cols=78  Identities=12%  Similarity=0.160  Sum_probs=65.4

Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEE-EEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT-HTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      -...+..+.|+|.-..+|.+..+|.+.++.++ .+.+..+ .-++..++ +++|.|||+.||.|-.||+|++.|+.++..
T Consensus        19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwti-p~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTI-PIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEec-cCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            34567889999999999999999999999998 5555555 32445555 999999999999999999999999998875


Q ss_pred             c
Q psy8758         196 L  196 (198)
Q Consensus       196 ~  196 (198)
                      +
T Consensus        97 l   97 (665)
T KOG4640|consen   97 L   97 (665)
T ss_pred             e
Confidence            4

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.29  E-value=0.00052  Score=49.22  Aligned_cols=185  Identities=14%  Similarity=0.089  Sum_probs=106.5

Q ss_pred             eEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-
Q psy8758           5 THTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-   81 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-   81 (198)
                      +.++++.||++++..  +-...|.|-|+..++...++..   .+   |...-|.++.-|++-+.||.+.-..+...-+. 
T Consensus        98 ~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~---PG---C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~  171 (342)
T PF06433_consen   98 NMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT---PG---CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEA  171 (342)
T ss_dssp             GGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG---TS---EEEEEEEETTEEEEEETTSCEEEEEETSTSSEE
T ss_pred             cceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC---CC---EEEEEecCCCceEEEecCCceEEEEECCCCCEe
Confidence            346788888877665  3456788889887776555433   22   22222333222333346777776666522111 


Q ss_pred             ------ccc-------c-----cCceEEEecCCCcEEEEEccCCC-cceeeecC----------CCcceEEEEEccCCCE
Q psy8758          82 ------LNV-------H-----KDMTSAAANEDFNLYSYDIRQLN-SPLNVHKD----------MTSAVTSVDYSPTGRE  132 (198)
Q Consensus        82 ------~~~-------~-----~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~----------~~~~i~~~~~sp~~~~  132 (198)
                            +..       +     ....++--+.+|.|+-.|+.... +....+..          .++...-+++++....
T Consensus       172 ~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~r  251 (342)
T PF06433_consen  172 QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGR  251 (342)
T ss_dssp             EEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTE
T ss_pred             EeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCe
Confidence                  111       1     11234446778888888877522 11112211          1233456888876654


Q ss_pred             EEEeec---C-------CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEE-ecCCCeEEEEecCCCcccc
Q psy8758         133 FVAGGY---D-------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVIS-ASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       133 l~~~~~---d-------~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~-~~~dg~v~~w~~~~~~~~~  197 (198)
                      |.+--.   +       ..|.++|+.+++.+..+...  .++.++..+.+.+ +|++ ...++.+.+||..+|++++
T Consensus       252 lyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~--~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~  326 (342)
T PF06433_consen  252 LYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE--HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVR  326 (342)
T ss_dssp             EEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE--EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEE
T ss_pred             EEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC--CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEe
Confidence            444221   1       15889999999998888544  4688999999776 5544 4568999999999998764

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.29  E-value=0.00062  Score=50.57  Aligned_cols=158  Identities=14%  Similarity=0.077  Sum_probs=103.3

Q ss_pred             eEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec--CCccEEEEeccCCCCc
Q psy8758           5 THTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN--EDFNLYSYDIRQLNSP   81 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~d~~i~~~d~~~~~~~   81 (198)
                      ..++.++.++.++.. ..++.+.+.|..+.+.......   ......++++|+++.++++-.  .++.+.+.|..+    
T Consensus        77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~v---G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t----  149 (381)
T COG3391          77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPV---GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAAT----  149 (381)
T ss_pred             cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeee---ccCCceEEECCCCCEEEEEecccCCceEEEEeCCC----
Confidence            467788888755544 4458899999766655444433   224578999999998888754  246666666554    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEEEEcCCCceee-EE--e
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRD-IY--H  157 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~~~~-~~--~  157 (198)
                                                .+.+........+ ..++++|+|+.+.... .++.+.++|........ ..  .
T Consensus       150 --------------------------~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~  202 (381)
T COG3391         150 --------------------------NKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSL  202 (381)
T ss_pred             --------------------------CeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccc
Confidence                                      2344443332233 7899999999666554 68999999977665543 10  0


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecC---CCeEEEEecCCCccc
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASD---EMNLRVWKAHASEKL  196 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~---dg~v~~w~~~~~~~~  196 (198)
                      ..-......+.++|+|+++.....   ++.+...|..++...
T Consensus       203 ~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~  244 (381)
T COG3391         203 VGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVT  244 (381)
T ss_pred             cccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEE
Confidence            112245577899999996655433   258888888776543

>KOG4640|consensus

Probab=98.27  E-value=8.8e-06  Score=61.56  Aligned_cols=95  Identities=19%  Similarity=0.263  Sum_probs=68.4

Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceE-E
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVT-S  123 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~-~  123 (198)
                      ...+..+.|+|.-..++. +..+|.+.+..+.-                               +.+.++..+..+++ +
T Consensus        20 ~~~i~~~ewnP~~dLiA~-~t~~gelli~R~n~-------------------------------qRlwtip~p~~~v~~s   67 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIAT-RTEKGELLIHRLNW-------------------------------QRLWTIPIPGENVTAS   67 (665)
T ss_pred             ccceEEEEEcCccchhhe-eccCCcEEEEEecc-------------------------------ceeEeccCCCCcccee
Confidence            345677889998777766 46778777777652                               33344443444444 9


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL  171 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~  171 (198)
                      ++|.|||+.||.|-.||+|++.|..++..+..........|..+-|++
T Consensus        68 L~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   68 LCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             eeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence            999999999999999999999999998876663223335677777763

>smart00320 WD40 WD40 repeats

Probab=98.21  E-value=5.6e-06  Score=39.05  Aligned_cols=38  Identities=32%  Similarity=0.481  Sum_probs=33.2

Q ss_pred             cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758         109 SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus       109 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      .+...+..|...+.++.|+|+++.+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            45566667888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.20  E-value=0.0011  Score=49.25  Aligned_cols=161  Identities=12%  Similarity=0.057  Sum_probs=107.3

Q ss_pred             eEEEECCCCceEEEeeC---CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           5 THTVWSLDNKFVISASD---EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..++++|+++.++.+..   ++.+.+.|..+.+.......  ...+ ..++++|++..++.+-..++.+.+.|.....  
T Consensus       119 ~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~v--G~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~--  193 (381)
T COG3391         119 VGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPV--GNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNS--  193 (381)
T ss_pred             ceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEec--CCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcc--
Confidence            56889999987777654   67888888877765555322  1223 7899999999888876678888888865421  


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC---CcEEEEEcCCCceeeEE-e
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---KSLRLYLAHQGHSRDIY-H  157 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---~~v~v~d~~~~~~~~~~-~  157 (198)
                                         ++. ......   .. .......+.++|+|.++......   +.+...|..++...... .
T Consensus       194 -------------------v~~-~~~~~~---~~-~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~  249 (381)
T COG3391         194 -------------------VVR-GSVGSL---VG-VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP  249 (381)
T ss_pred             -------------------eec-cccccc---cc-cCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc
Confidence                               010 000001   11 12234568999999966655443   58999999998776652 2


Q ss_pred             ccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCcc
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEK  195 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~  195 (198)
                      .+.. ....+..+|+|+.+... +..+.+.+-|..+.+.
T Consensus       250 ~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v  287 (381)
T COG3391         250 VGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRV  287 (381)
T ss_pred             cccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCce
Confidence            2222 45678999999988776 4457888888877554

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.19  E-value=0.001  Score=48.31  Aligned_cols=143  Identities=17%  Similarity=0.147  Sum_probs=89.1

Q ss_pred             CceEEEeeC----------CCeEEEEEccCC----ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758          13 NKFVISASD----------EMNLRVWKAHAS----EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus        13 ~~~l~~~~~----------d~~i~i~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      .+++++|+.          .|.+.++++...    ..+..+......++|.+++--  +..++++  .++.+.+|++...
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~--~g~~l~v~~l~~~  117 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVA--VGNKLYVYDLDNS  117 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEE--ETTEEEEEEEETT
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEe--ecCEEEEEEccCc
Confidence            467777642          288999999873    345555555567888888765  3345543  3577888887653


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCCcEEEEEcCC-Cc-eee
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-GH-SRD  154 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~-~~-~~~  154 (198)
                                                    +.+.....  ....+.++...  +.+++.|.....+.++..+. .. ...
T Consensus       118 ------------------------------~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~  165 (321)
T PF03178_consen  118 ------------------------------KTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLIL  165 (321)
T ss_dssp             ------------------------------SSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEE
T ss_pred             ------------------------------ccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEE
Confidence                                          21221111  22245555544  66999999888888886554 22 333


Q ss_pred             EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .........+.++.|-++++.++.+..+|.+.++...
T Consensus       166 va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  166 VARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             EEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             EEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            3233334678999998777788899999999999886

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG3617|consensus

Probab=98.19  E-value=8.7e-06  Score=63.93  Aligned_cols=72  Identities=11%  Similarity=0.198  Sum_probs=63.0

Q ss_pred             cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      -.+++++|+|..-.|+.|-.-|.+.+|...+.+..... ..|..+|..+.|||+|..++++..-|.|.+|...
T Consensus        60 ~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~-~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   60 VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVV-ETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eehhhhccChHHHHHhhccccceeEEEecCCceeeeec-cCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            34677999999888999999999999998887665544 6788999999999999999999999999999876

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.18  E-value=0.0013  Score=49.33  Aligned_cols=176  Identities=15%  Similarity=0.069  Sum_probs=90.8

Q ss_pred             EEECCCCceEEEeeCC----------C-eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           7 TVWSLDNKFVISASDE----------M-NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d----------~-~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      ++.+|.|--+|...++          . .|++|+. .|+.+..+.-.  .+.+.++.|+.+...+++  ..||.++++|+
T Consensus        34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~-sG~ll~~i~w~--~~~iv~~~wt~~e~LvvV--~~dG~v~vy~~  108 (410)
T PF04841_consen   34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSS-SGKLLSSIPWD--SGRIVGMGWTDDEELVVV--QSDGTVRVYDL  108 (410)
T ss_pred             EEEcCCCceEEEEecCcccccccCCCCcEEEEECC-CCCEeEEEEEC--CCCEEEEEECCCCeEEEE--EcCCEEEEEeC
Confidence            4555655555555333          1 4888886 45555554432  378999999987666654  48999999998


Q ss_pred             cCCC-----------Ccccc-------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceE---------E-EEEc
Q psy8758          76 RQLN-----------SPLNV-------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVT---------S-VDYS  127 (198)
Q Consensus        76 ~~~~-----------~~~~~-------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~---------~-~~~s  127 (198)
                      ....           .....       .... ++.-+.++.+.+..-.......+.+..-.....         . ..++
T Consensus       109 ~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G-ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~  187 (410)
T PF04841_consen  109 FGEFQFSLGEEIEEEKVLECRIFAIWFYKNG-IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLS  187 (410)
T ss_pred             CCceeechhhhccccCcccccccccccCCCC-EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEee
Confidence            5322           00000       0011 222234444443322110001111110000000         0 1233


Q ss_pred             cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .+....+....++.+.+.+-...+.   +  ...+++..|+.||+|+++|.-..+|.+.+...+-.
T Consensus       188 ~~~~~~i~~~~g~~i~~i~~~~~~~---i--~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~  248 (410)
T PF04841_consen  188 SDRVVEILLANGETIYIIDENSFKQ---I--DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS  248 (410)
T ss_pred             cCcceEEEEecCCEEEEEEcccccc---c--cCCCCeEEEEECCCCCEEEEEECCCCEEEEECccc
Confidence            3344444444444454333322211   1  12358999999999999999888999988865433

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.18  E-value=0.00024  Score=52.18  Aligned_cols=189  Identities=15%  Similarity=0.209  Sum_probs=99.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee----------------cCceeeEEeCCCCCeEEEEecC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM----------------SLRSNMVSWNPMEAFVFTAANE   66 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~~~~   66 (198)
                      .+....|||+|+.++... ++.|.+.+..++.. ..+.....                -..-..+-||||+++|+..--+
T Consensus        44 ~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~-~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d  121 (353)
T PF00930_consen   44 KLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQE-TQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD  121 (353)
T ss_dssp             TBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEE-EESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred             ccccceeecCCCeeEEEe-cCceEEEECCCCCe-EEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence            567889999999998875 57899998876632 22221110                1123578899999999987666


Q ss_pred             CccEEEEeccCCCCccc---c-ccCceEEEecCCCc--EEEEEccCCCcce-eee---cCCCcceEEEEEccCCCEEEEe
Q psy8758          67 DFNLYSYDIRQLNSPLN---V-HKDMTSAAANEDFN--LYSYDIRQLNSPL-NVH---KDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        67 d~~i~~~d~~~~~~~~~---~-~~~~~~~~~~~~~~--i~~~d~~~~~~~~-~~~---~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                      +..+..+.+......-.   . +.-.+=..|..+..  +.++|+.+..... ...   ......+..+.|.++++.++..
T Consensus       122 ~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~  201 (353)
T PF00930_consen  122 EREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQ  201 (353)
T ss_dssp             -TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEE
T ss_pred             CcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEE
Confidence            66666665532211110   0 00011112333333  5567887632211 111   2345568999999999844433


Q ss_pred             --ecC---CcEEEEEcCCCceeeEEeccCcccE---EEEEEc-CCCC-EEEEecCCCeE--EEEecCCC
Q psy8758         137 --GYD---KSLRLYLAHQGHSRDIYHTKRMQHV---THTVWS-LDNK-FVISASDEMNL--RVWKAHAS  193 (198)
Q Consensus       137 --~~d---~~v~v~d~~~~~~~~~~~~~~~~~v---~~~~~s-~~~~-~l~~~~~dg~v--~~w~~~~~  193 (198)
                        +.+   ..+.++|..++.............|   ....|. +++. +|.....||--  .+++..++
T Consensus       202 ~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~  270 (353)
T PF00930_consen  202 WLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGG  270 (353)
T ss_dssp             EEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSS
T ss_pred             EcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccc
Confidence              332   2577778887766544433333333   245554 6555 44445566654  44454444

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.17  E-value=0.00084  Score=46.56  Aligned_cols=171  Identities=11%  Similarity=0.136  Sum_probs=90.0

Q ss_pred             cceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.+..++|+|+.+ ++++....+.|..++. +++.++.+.-. ..+..-.+++..++.++++ ...++.+.++++.....
T Consensus        22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~-g~~D~EgI~y~g~~~~vl~-~Er~~~L~~~~~~~~~~   98 (248)
T PF06977_consen   22 DELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLD-GFGDYEGITYLGNGRYVLS-EERDQRLYIFTIDDDTT   98 (248)
T ss_dssp             S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-S-S-SSEEEEEE-STTEEEEE-ETTTTEEEEEEE----T
T ss_pred             CCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCC-CCCCceeEEEECCCEEEEE-EcCCCcEEEEEEecccc
Confidence            3589999999755 6666667788877776 46655554432 2345678888877766554 34678888888753211


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC---CceeeEE-
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ---GHSRDIY-  156 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~---~~~~~~~-  156 (198)
                      ......            +.-+++       .....+...+-.++|+|.++.|+.+-...-..+|.++.   ....... 
T Consensus        99 ~~~~~~------------~~~~~l-------~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~  159 (248)
T PF06977_consen   99 SLDRAD------------VQKISL-------GFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSD  159 (248)
T ss_dssp             T--EEE------------EEEEE----------S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE
T ss_pred             ccchhh------------ceEEec-------ccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecc
Confidence            110000            000000       01112445688999999888777777766677777764   2222111 


Q ss_pred             e------ccCcccEEEEEEcCC-CCEEEEecCCCeEEEEecCCCcc
Q psy8758         157 H------TKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       157 ~------~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .      ......+.+++++|. +.+++.+..+..+..+| .+|+.
T Consensus       160 ~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~  204 (248)
T PF06977_consen  160 DQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRV  204 (248)
T ss_dssp             -HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--E
T ss_pred             ccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCE
Confidence            0      112346889999996 45666677778888887 44443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.16  E-value=0.00014  Score=54.65  Aligned_cols=134  Identities=16%  Similarity=0.155  Sum_probs=74.1

Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc-------cccCceEEEecCCCcEEEE-EccCCCcceeeecC
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-------VHKDMTSAAANEDFNLYSY-DIRQLNSPLNVHKD  116 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~-d~~~~~~~~~~~~~  116 (198)
                      ...+..+.++|+++.++++  .+|.-.++..........       ......+++-..+.+|.++ +++.  .....+..
T Consensus        32 ~~~p~~ls~npngr~v~V~--g~geY~iyt~~~~r~k~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~--~~~k~i~~  107 (443)
T PF04053_consen   32 EIYPQSLSHNPNGRFVLVC--GDGEYEIYTALAWRNKAFGSGLSFVWSSRNRYAVLESSSTIKIYKNFKN--EVVKSIKL  107 (443)
T ss_dssp             SS--SEEEE-TTSSEEEEE--ETTEEEEEETTTTEEEEEEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE---TT-----
T ss_pred             CcCCeeEEECCCCCEEEEE--cCCEEEEEEccCCcccccCceeEEEEecCccEEEEECCCeEEEEEcCcc--ccceEEcC
Confidence            3446899999999999885  477777877433222111       1223345666667777775 3332  22222221


Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                       +..+..+-.   |..|+..+.+ .|.+||..+++.+..+..   .+|..+.|+++|++++..+.+ .+.+++.+
T Consensus       108 -~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v---~~vk~V~Ws~~g~~val~t~~-~i~il~~~  173 (443)
T PF04053_consen  108 -PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDV---SAVKYVIWSDDGELVALVTKD-SIYILKYN  173 (443)
T ss_dssp             -SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred             -CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEec---CCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence             112333322   8877777654 899999999999888732   248999999999999988755 57776643

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>smart00320 WD40 WD40 repeats

Probab=98.15  E-value=1.3e-05  Score=37.67  Aligned_cols=32  Identities=31%  Similarity=0.561  Sum_probs=29.0

Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ..|...|.++.|+++++++++++.|+.+++|+
T Consensus         9 ~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        9 KGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            46678999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2314|consensus

Probab=98.10  E-value=7.3e-05  Score=56.11  Aligned_cols=117  Identities=21%  Similarity=0.298  Sum_probs=74.6

Q ss_pred             cceeEEEECCCCceEEEee---CCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCCCCCeEEEEe--cCCccEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISAS---DEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA--NEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~---~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~d~~i~~~d~   75 (198)
                      +.|...+|-|.|+.+++-+   ...++++|.+++ ......+..+. ....+.+.|+|.|+.+++++  +..|.+..+|.
T Consensus       446 e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d-k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~  524 (698)
T KOG2314|consen  446 ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD-KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDT  524 (698)
T ss_pred             hheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc-ccccceEEEcCCCcEEEEEEecccccceEEEec
Confidence            4578899999999877654   345788898873 33333333332 24467899999999998765  33455555554


Q ss_pred             cCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec------CCcEEEEEcCC
Q psy8758          76 RQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY------DKSLRLYLAHQ  149 (198)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------d~~v~v~d~~~  149 (198)
                      ..                              ......-.......+.+.|.|.|+|+++++.      |.--++|+.+.
T Consensus       525 ~~------------------------------a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqG  574 (698)
T KOG2314|consen  525 DY------------------------------ADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQG  574 (698)
T ss_pred             ch------------------------------hhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEeec
Confidence            42                              1111111112234678999999999999875      44466666654

>KOG3621|consensus

Probab=98.05  E-value=4.8e-05  Score=58.43  Aligned_cols=113  Identities=12%  Similarity=0.125  Sum_probs=76.9

Q ss_pred             EECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccC
Q psy8758           8 VWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKD   87 (198)
Q Consensus         8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~   87 (198)
                      +++..+++++.|+.-|.+++|+-..+... .++.....+.+.....+++... +++|+..|.|.++.+.....       
T Consensus        40 c~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~l-vAagt~~g~V~v~ql~~~~p-------  110 (726)
T KOG3621|consen   40 CVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYL-VAAGTASGRVSVFQLNKELP-------  110 (726)
T ss_pred             EeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHh-hhhhcCCceEEeehhhccCC-------
Confidence            45667889999999999999997766532 2222112333455566666554 45567888888887764210       


Q ss_pred             ceEEEecCCCcEEEEEccCCCccee--ee-cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          88 MTSAAANEDFNLYSYDIRQLNSPLN--VH-KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        88 ~~~~~~~~~~~i~~~d~~~~~~~~~--~~-~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                          .....  .. ..|+..|++++|++++..+.+|...|.|..-.+..
T Consensus       111 --------------------~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  111 --------------------RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             --------------------CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence                                01111  11 23788899999999999999999999998887776

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.01  E-value=0.0025  Score=49.08  Aligned_cols=181  Identities=14%  Similarity=0.070  Sum_probs=104.0

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeee----cCce--eeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccccc
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVM----SLRS--NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHK   86 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~v--~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~   86 (198)
                      +..++.++.++.+.-.|..+++..-.......    ...+  ..+... ++..+++ ++.++.+..+|.++.+.......
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v-~~~~g~v~AlD~~TG~~~W~~~~  138 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFF-GTFDGRLVALDAETGKQVWKFGN  138 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEE-ecCCCeEEEEECCCCCEeeeecC
Confidence            34566777789999999988876544432111    0000  011111 2144544 46788999988876654322110


Q ss_pred             -----------------CceEEEec---------CCCcEEEEEccCCCcceeeecCCCc--------------------c
Q psy8758          87 -----------------DMTSAAAN---------EDFNLYSYDIRQLNSPLNVHKDMTS--------------------A  120 (198)
Q Consensus        87 -----------------~~~~~~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~--------------------~  120 (198)
                                       +..++.++         .++.+..+|..+ ++.+..+.....                    .
T Consensus       139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~T-G~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~  217 (488)
T cd00216         139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVET-GKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT  217 (488)
T ss_pred             CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCC-CceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence                             11233443         367889999887 566555432111                    0


Q ss_pred             e-EEEEEccCCCEEEEeecCC------------------cEEEEEcCCCceeeEEeccCcc-----cEEEEEEc----CC
Q psy8758         121 V-TSVDYSPTGREFVAGGYDK------------------SLRLYLAHQGHSRDIYHTKRMQ-----HVTHTVWS----LD  172 (198)
Q Consensus       121 i-~~~~~sp~~~~l~~~~~d~------------------~v~v~d~~~~~~~~~~~~~~~~-----~v~~~~~s----~~  172 (198)
                      + ...++.+.+..++.++.++                  .+.-+|..+++.+..+...+..     ......+.    -+
T Consensus       218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~  297 (488)
T cd00216         218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKD  297 (488)
T ss_pred             ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccC
Confidence            0 1345555566677776554                  6999999999988776332211     00011111    13


Q ss_pred             CC---EEEEecCCCeEEEEecCCCccc
Q psy8758         173 NK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       173 ~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.   .++.++.+|.+...|.++|+.+
T Consensus       298 g~~~~~V~~g~~~G~l~ald~~tG~~~  324 (488)
T cd00216         298 GKPVPAIVHAPKNGFFYVLDRTTGKLI  324 (488)
T ss_pred             CCeeEEEEEECCCceEEEEECCCCcEe
Confidence            33   5777888999999999999875

The alignment model contains an 8-bladed beta-propeller.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.00  E-value=0.003  Score=48.61  Aligned_cols=103  Identities=12%  Similarity=0.118  Sum_probs=64.5

Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE-----------------eecCCcEEEEEcCCCc
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-----------------GGYDKSLRLYLAHQGH  151 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-----------------~~~d~~v~v~d~~~~~  151 (198)
                      +++.++.+|.+...|.++ ++++......   ...++.+| +..++.                 ...+|.+.-.|+.+++
T Consensus       303 ~V~~g~~~G~l~ald~~t-G~~~W~~~~~---~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~  377 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTT-GKLISARPEV---EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGK  377 (488)
T ss_pred             EEEEECCCceEEEEECCC-CcEeeEeEee---ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCc
Confidence            467788899999999998 6766654321   11234444 222221                 1235788889999998


Q ss_pred             eeeEEeccC-c------ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         152 SRDIYHTKR-M------QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       152 ~~~~~~~~~-~------~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+....... .      .+...-.....+..|+.++.||.++.+|.++|+.+
T Consensus       378 ~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~l  429 (488)
T cd00216         378 VVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKEL  429 (488)
T ss_pred             EeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCcee
Confidence            877653320 0      11110011124567888889999999999999876

The alignment model contains an 8-bladed beta-propeller.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.97  E-value=0.0014  Score=45.71  Aligned_cols=150  Identities=15%  Similarity=0.084  Sum_probs=84.8

Q ss_pred             eEEEECCCCc-eEEEeeCCCe-EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           5 THTVWSLDNK-FVISASDEMN-LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         5 ~~~~~s~~~~-~l~~~~~d~~-i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ..++|+|... -++.+-.-|+ ..++|.+..+.+..+.......---.-.|||||.+|+++- .|-     |        
T Consensus        71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATE-ndf-----d--------  136 (366)
T COG3490          71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATE-NDF-----D--------  136 (366)
T ss_pred             CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeec-CCC-----C--------
Confidence            3456666433 3333433333 3567776666555443322111122345788888877652 220     0        


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec------------------CCcEEE
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY------------------DKSLRL  144 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------------------d~~v~v  144 (198)
                                 ...|.|=+||.+..-+.+-.+..|.-....+.|.+||+.++.++.                  .-++.+
T Consensus       137 -----------~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvl  205 (366)
T COG3490         137 -----------PNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVL  205 (366)
T ss_pred             -----------CCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEE
Confidence                       123455666665434556677777777889999999999887643                  123444


Q ss_pred             EEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEe
Q psy8758         145 YLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       145 ~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .|..+|.++.....   .+.-.++.++..+||..++.+
T Consensus       206 ld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc  243 (366)
T COG3490         206 LDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC  243 (366)
T ss_pred             EeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence            55455554433211   233568888888888877655

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.92  E-value=6e-05  Score=37.72  Aligned_cols=35  Identities=9%  Similarity=0.286  Sum_probs=31.0

Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ...|..++|+|...+||.+..+|.|.++++ +++.+
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri   45 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI   45 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence            357999999999999999999999999999 66554

>KOG3617|consensus

Probab=97.90  E-value=5e-05  Score=59.89  Aligned_cols=108  Identities=13%  Similarity=0.191  Sum_probs=78.2

Q ss_pred             EEEECCCCceEEEee----CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           6 HTVWSLDNKFVISAS----DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~----~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      -..|+|...++++++    ..|.|.||- ++|+..+-+..   +..+.+++|+|..-.+ +.|-.-|.+.+|....    
T Consensus        20 i~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~---P~hatSLCWHpe~~vL-a~gwe~g~~~v~~~~~----   90 (1416)
T KOG3617|consen   20 ISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY---PVHATSLCWHPEEFVL-AQGWEMGVSDVQKTNT----   90 (1416)
T ss_pred             ccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc---ceehhhhccChHHHHH-hhccccceeEEEecCC----
Confidence            357899998888775    467888874 45553222222   2335689999975444 4465667777777654    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                                                .+.-.....|+.+|..+.|||+|..|+++..-|.+.+|...
T Consensus        91 --------------------------~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   91 --------------------------TETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             --------------------------ceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence                                      23344456799999999999999999999999999999876

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.87  E-value=0.0027  Score=47.32  Aligned_cols=178  Identities=12%  Similarity=0.025  Sum_probs=95.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------eecCceeeEEeCC-----CC--CeEEEEecCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------VMSLRSNMVSWNP-----ME--AFVFTAANEDF   68 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~~~-----~~--~~~~~~~~~d~   68 (198)
                      ++|++++.| |=-++|.|..+|.+.|.|++.+..+......      .....++++.|..     |+  ..++.+|...|
T Consensus        87 g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G  165 (395)
T PF08596_consen   87 GPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSG  165 (395)
T ss_dssp             -SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTS
T ss_pred             CcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCC
Confidence            689999997 4458999999999999999766543331111      1233466777752     22  23444567789


Q ss_pred             cEEEEeccC-CCCc---------------------cccc-------------------cCceEEEecCCCcEEEEEccCC
Q psy8758          69 NLYSYDIRQ-LNSP---------------------LNVH-------------------KDMTSAAANEDFNLYSYDIRQL  107 (198)
Q Consensus        69 ~i~~~d~~~-~~~~---------------------~~~~-------------------~~~~~~~~~~~~~i~~~d~~~~  107 (198)
                      .+.+|.+.- ....                     +...                   .-.-++....+..++++.+.+ 
T Consensus       166 ~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~-  244 (395)
T PF08596_consen  166 NVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPK-  244 (395)
T ss_dssp             EEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT--
T ss_pred             CEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCC-
Confidence            998887641 1100                     0000                   001245555677888888876 


Q ss_pred             CcceeeecCCCcceEEEEEc-----cCCCEEEEeecCCcEEEEEcCCCceeeEEecc---CcccEEEEEEcCCCCEEEEe
Q psy8758         108 NSPLNVHKDMTSAVTSVDYS-----PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK---RMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~s-----p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .+..............+.+-     ..+..|++-..+|.+++|.+..-+.+......   ....+....++++|..++..
T Consensus       245 ~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~  324 (395)
T PF08596_consen  245 SKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWT  324 (395)
T ss_dssp             --EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-
T ss_pred             CcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEEEEe
Confidence            33333222222233334442     24567888889999999999997776655321   12345567789999977766


Q ss_pred             cC
Q psy8758         180 SD  181 (198)
Q Consensus       180 ~~  181 (198)
                      +.
T Consensus       325 gp  326 (395)
T PF08596_consen  325 GP  326 (395)
T ss_dssp             SS
T ss_pred             Cc
Confidence            54

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.87  E-value=0.0044  Score=44.55  Aligned_cols=89  Identities=10%  Similarity=0.113  Sum_probs=58.2

Q ss_pred             CcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCC--C----ceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQ--G----HSRDIYHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~--~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      +..++.+..+-...+.|+||||++.|..+.. .+.|.-|++..  +    +..........+..-.++...+|.+.+++.
T Consensus       152 g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~  231 (307)
T COG3386         152 GGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAV  231 (307)
T ss_pred             CCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecc
Confidence            4455555555556788999999987776654 57888887762  1    111222222345666778888888876554


Q ss_pred             CCC-eEEEEecCCCcccc
Q psy8758         181 DEM-NLRVWKAHASEKLE  197 (198)
Q Consensus       181 ~dg-~v~~w~~~~~~~~~  197 (198)
                      .+| .|..|+.+ |++++
T Consensus       232 ~~g~~v~~~~pd-G~l~~  248 (307)
T COG3386         232 WGGGRVVRFNPD-GKLLG  248 (307)
T ss_pred             cCCceEEEECCC-CcEEE
Confidence            444 89999998 77654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.84  E-value=8.9e-05  Score=37.09  Aligned_cols=32  Identities=9%  Similarity=0.281  Sum_probs=28.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE   34 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~   34 (198)
                      ..|.+++|+|...++|.++.+|.|.+|++ +++
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            46899999999999999999999999998 443

>KOG1920|consensus

Probab=97.84  E-value=0.0018  Score=53.19  Aligned_cols=118  Identities=13%  Similarity=0.227  Sum_probs=71.1

Q ss_pred             eEEEECCCCceEEEe-----eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC--CccEEEEeccC
Q psy8758           5 THTVWSLDNKFVISA-----SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE--DFNLYSYDIRQ   77 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~~   77 (198)
                      ..+.|--||+++|+.     .....+++||-+ +. +...... ...--.+++|-|.|..+++....  +..|.++.-..
T Consensus       199 ~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~-Lns~se~-~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG  275 (1265)
T KOG1920|consen  199 TSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GA-LNSTSEP-VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG  275 (1265)
T ss_pred             ceEEEccCCcEEEEEEEeccCCceeEEEeccc-ch-hhcccCc-ccccccceeecCCCCeEeeeeecCCCCcEEEEecCC
Confidence            358899999999984     233799999976 32 1111111 12223579999999998876522  33344443221


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE---eecCCcEEEEEcCCCce
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA---GGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~---~~~d~~v~v~d~~~~~~  152 (198)
                      .                          +. +.....+.....++..++|+.++..|++   ......|++|-+.....
T Consensus       276 L--------------------------~h-g~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhW  326 (1265)
T KOG1920|consen  276 L--------------------------RH-GEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHW  326 (1265)
T ss_pred             c--------------------------cc-cccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEE
Confidence            1                          00 1111112223334899999999999987   44445599999887543

>KOG4649|consensus

Probab=97.84  E-value=0.0039  Score=43.00  Aligned_cols=65  Identities=11%  Similarity=0.154  Sum_probs=45.4

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      -|++++.|...|.+++.+..+|.....+.... ... ......+++..+. +|+.|++.+..|.++..
T Consensus        62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~-~vk-~~a~~d~~~glIy-cgshd~~~yalD~~~~~  126 (354)
T KOG4649|consen   62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE-TVK-VRAQCDFDGGLIY-CGSHDGNFYALDPKTYG  126 (354)
T ss_pred             ECCEEEEEEccCcEEEEEecchhheeeeeehh-hhc-cceEEcCCCceEE-EecCCCcEEEecccccc
Confidence            35678889999999999999987655554432 111 2334566777665 47899999999987644

>KOG2079|consensus

Probab=97.83  E-value=0.00014  Score=58.74  Aligned_cols=99  Identities=17%  Similarity=0.226  Sum_probs=72.1

Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCccc---EE
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH---VT  165 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~---v~  165 (198)
                      .++.|+..|.+-..|+...-.+...-+....+|++++|+.+|+.++.|-.+|.|.+||+..++....+ ..|..+   |.
T Consensus       101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i-~e~~ap~t~vi  179 (1206)
T KOG2079|consen  101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVI-TEHGAPVTGVI  179 (1206)
T ss_pred             eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeee-eecCCccceEE
Confidence            36778888888888887532333344455789999999999999999999999999999998887776 233333   44


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         166 HTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       166 ~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      .+.+..++..++++..-|.  +|++
T Consensus       180 ~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  180 FVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             EEEEeCCCcEEEEccCCCc--eEEE
Confidence            4455556667777776675  4543

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.81  E-value=0.0074  Score=45.38  Aligned_cols=57  Identities=11%  Similarity=0.139  Sum_probs=43.6

Q ss_pred             CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC
Q psy8758         118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK  174 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~  174 (198)
                      .+++..|+.||+|+++|.-..+|.+.+.+..-.+....+..........|.|.-+..
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da  272 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA  272 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence            357999999999999999999999999887766665555444345667788876544

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.77  E-value=0.0019  Score=51.80  Aligned_cols=121  Identities=15%  Similarity=0.122  Sum_probs=81.3

Q ss_pred             CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCC-------CeEEEEecCCccEEEEeccCCCCccc----------
Q psy8758          21 DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPME-------AFVFTAANEDFNLYSYDIRQLNSPLN----------   83 (198)
Q Consensus        21 ~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~~~~~~~~~d~~i~~~d~~~~~~~~~----------   83 (198)
                      ....|+-.|++.|+.+....... ..+|  ..+.|+.       ...+. |-.+..++.||.|-....+.          
T Consensus       502 ~~~~ly~mDLe~GKVV~eW~~~~-~~~v--~~~~p~~K~aqlt~e~tfl-Gls~n~lfriDpR~~~~k~v~~~~k~Y~~~  577 (794)
T PF08553_consen  502 NPNKLYKMDLERGKVVEEWKVHD-DIPV--VDIAPDSKFAQLTNEQTFL-GLSDNSLFRIDPRLSGNKLVDSQSKQYSSK  577 (794)
T ss_pred             CCCceEEEecCCCcEEEEeecCC-Ccce--eEecccccccccCCCceEE-EECCCceEEeccCCCCCceeeccccccccC
Confidence            45678888999998777776542 2223  3444431       22233 45688899999985432111          


Q ss_pred             -------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          84 -------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        84 -------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                             ......+++|+.+|.|++||--. ......+++...+|..|..+.||++++..+ +..+.+++.
T Consensus       578 ~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g-~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  578 NNFSCFATTEDGYIAVGSNKGDIRLYDRLG-KRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             CCceEEEecCCceEEEEeCCCcEEeecccc-hhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence                   11235699999999999999543 344556667789999999999999887665 456777765

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.75  E-value=0.0014  Score=45.69  Aligned_cols=173  Identities=12%  Similarity=0.165  Sum_probs=95.3

Q ss_pred             EECCCCceEEEeeCC-----CeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE-eccCCCC
Q psy8758           8 VWSLDNKFVISASDE-----MNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY-DIRQLNS   80 (198)
Q Consensus         8 ~~s~~~~~l~~~~~d-----~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~-d~~~~~~   80 (198)
                      .|||||++|+..-+|     |.|-|||...+ +.+-++..  +......+.|.+||+.++.+.   |-|..- |....+.
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t--~GiGpHev~lm~DGrtlvvan---GGIethpdfgR~~l  194 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFST--HGIGPHEVTLMADGRTLVVAN---GGIETHPDFGRTEL  194 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccccceeccccc--CCcCcceeEEecCCcEEEEeC---CceecccccCcccc
Confidence            489999999876443     78899998643 22223333  344556889999999998753   334333 2221111


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeee--c--CCCcceEEEEEccCCCEEEEeecCCc-----EEEEEcCCCc
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH--K--DMTSAVTSVDYSPTGREFVAGGYDKS-----LRLYLAHQGH  151 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~--~~~~~i~~~~~sp~~~~l~~~~~d~~-----v~v~d~~~~~  151 (198)
                      .+.          +...++.+.|..+ +..+...  .  .+.-.+.-++..+||+.++-+-..|.     -.+=-...++
T Consensus       195 Nld----------sMePSlvlld~at-G~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~  263 (366)
T COG3490         195 NLD----------SMEPSLVLLDAAT-GNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGE  263 (366)
T ss_pred             chh----------hcCccEEEEeccc-cchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCC
Confidence            111          1222344444333 3333322  2  34556888889999887766544331     1111112233


Q ss_pred             eeeEEecc------CcccEEEEEEcCCCCEEE-EecCCCeEEEEecCCCccc
Q psy8758         152 SRDIYHTK------RMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       152 ~~~~~~~~------~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+..+...      -...|-+++.+.+..+++ |+-..+..-+||..+|+.+
T Consensus       264 ~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv  315 (366)
T COG3490         264 PLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVV  315 (366)
T ss_pred             cCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEE
Confidence            33322111      124577788876555555 4444566789999999865

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.73  E-value=0.0027  Score=37.93  Aligned_cols=65  Identities=20%  Similarity=0.132  Sum_probs=44.6

Q ss_pred             eeEEEECC---CC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           4 VTHTVWSL---DN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         4 v~~~~~s~---~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      |+++++..   +| +.|++|+.|..||+|+-+  +.+..+.   ....|.++.-...++ ++. +-.+|+|-+|+-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~---e~~~v~~L~~~~~~~-F~Y-~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT---ETDKVTSLCSLGGGR-FAY-ALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe---cccceEEEEEcCCCE-EEE-EecCCEEEEEeC
Confidence            66676654   43 589999999999999843  3333443   356778887776644 333 457899988874

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.73  E-value=0.0018  Score=50.78  Aligned_cols=62  Identities=8%  Similarity=-0.095  Sum_probs=40.6

Q ss_pred             eEEEEEccCCCEEEEeecC------------CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         121 VTSVDYSPTGREFVAGGYD------------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d------------~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      ...-.|+|||+.+.+....            +.+.+.+++.+....    .....|..+.|||||..++... ++.|++
T Consensus       399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~----~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS----RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh----ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence            7788999998877766432            233333444333322    1235799999999999887655 467776

>KOG2114|consensus

Probab=97.71  E-value=0.0076  Score=48.08  Aligned_cols=130  Identities=11%  Similarity=0.067  Sum_probs=87.4

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEcc--CCceeeeeeeeeecCceeeEEeCCCCCe-EEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWNPMEAF-VFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++.+++.+.+-+.+|.|-.+|.|..+.-+  -.+..+....+....+|+.+++..++.. +|++  ....|.+|.+... 
T Consensus       127 p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~--Tt~~V~~y~l~gr-  203 (933)
T KOG2114|consen  127 PASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVA--TTEQVMLYSLSGR-  203 (933)
T ss_pred             cceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEE--ecceeEEEEecCC-
Confidence            57788899998999999999999887532  1111223333446788999999988877 3333  3456666766532 


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK  159 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~  159 (198)
                                                  ......+..|...++|..+++....+++++ +..+.+|+......-..+..+
T Consensus       204 ----------------------------~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~~g  254 (933)
T KOG2114|consen  204 ----------------------------TPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFEVG  254 (933)
T ss_pred             ----------------------------CcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeecCC
Confidence                                        222444677788899999988655455554 356999999877766666446


Q ss_pred             CcccE
Q psy8758         160 RMQHV  164 (198)
Q Consensus       160 ~~~~v  164 (198)
                      |....
T Consensus       255 ~kk~~  259 (933)
T KOG2114|consen  255 EKKEM  259 (933)
T ss_pred             CeEEE
Confidence            55443

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.65  E-value=0.014  Score=44.00  Aligned_cols=124  Identities=19%  Similarity=0.127  Sum_probs=70.0

Q ss_pred             eeEEEECCCCceEEEe-eCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-cEEEEeccC
Q psy8758           4 VTHTVWSLDNKFVISA-SDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-NLYSYDIRQ   77 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~-~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~~d~~~   77 (198)
                      +....+||+|+++|.+ +..    ..++++|+.+++.+......  . ....+.|.++++.++.+...+. ...      
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~--~-~~~~~~W~~d~~~~~y~~~~~~~~~~------  196 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN--P-KFSSVSWSDDGKGFFYTRFDEDQRTS------  196 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE--E-ESEEEEECTTSSEEEEEECSTTTSS-------
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc--c-ccceEEEeCCCCEEEEEEeCcccccc------
Confidence            3467899999988865 333    45999999998654322111  1 1223999999998887652221 100      


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcc-eeeecCCCc--ceEEEEEccCCCEEEEeec---C-CcEEEEEcCCC
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSP-LNVHKDMTS--AVTSVDYSPTGREFVAGGY---D-KSLRLYLAHQG  150 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~--~i~~~~~sp~~~~l~~~~~---d-~~v~v~d~~~~  150 (198)
                                    .......|+.|.+.+.... ...+.....  ....+..++|+++++....   + ..+.+.++..+
T Consensus       197 --------------~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~  262 (414)
T PF02897_consen  197 --------------DSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG  262 (414)
T ss_dssp             --------------CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred             --------------cCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence                          0112233555555442222 233332222  2567888999998765433   3 45788888774

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.64  E-value=0.014  Score=43.66  Aligned_cols=191  Identities=11%  Similarity=0.109  Sum_probs=104.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceee----------------------ee------------------ee-
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG----------------------PI------------------RK-   41 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~----------------------~~------------------~~-   41 (198)
                      .|+.+.|+++...|+++...|.|-||.....+...                      .+                  .. 
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            58899999998899999999999998764221110                      00                  00 


Q ss_pred             eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc-----------------------------ccCceEEE
Q psy8758          42 VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV-----------------------------HKDMTSAA   92 (198)
Q Consensus        42 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~-----------------------------~~~~~~~~   92 (198)
                      ....++|++++.+. --++ +.|..+|.+.+.|+|.....+..                             +....++.
T Consensus        83 ~~~~g~vtal~~S~-iGFv-aigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v  160 (395)
T PF08596_consen   83 DAKQGPVTALKNSD-IGFV-AIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV  160 (395)
T ss_dssp             ---S-SEEEEEE-B-TSEE-EEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred             eccCCcEeEEecCC-CcEE-EEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence            01245678888763 3444 44689999999999865432221                             11135888


Q ss_pred             ecCCCcEEEEEccC-CCc-c----eeeecCCCcceEEEE-EccC-C-------------------CEEEEeecCCcEEEE
Q psy8758          93 ANEDFNLYSYDIRQ-LNS-P----LNVHKDMTSAVTSVD-YSPT-G-------------------REFVAGGYDKSLRLY  145 (198)
Q Consensus        93 ~~~~~~i~~~d~~~-~~~-~----~~~~~~~~~~i~~~~-~sp~-~-------------------~~l~~~~~d~~v~v~  145 (198)
                      |+..|.+.+|.+.. ... .    ......+.+++..+. ++.+ |                   .-++....+..++++
T Consensus       161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~  240 (395)
T PF08596_consen  161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF  240 (395)
T ss_dssp             EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred             EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence            89999999998752 111 1    111123455555554 3222 1                   123333446789999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEc-----CCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWS-----LDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s-----~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ...+.+...... ........+.+-     ..+..|++-..+|.++++.+..-+.+
T Consensus       241 ~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei  295 (395)
T PF08596_consen  241 KPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEI  295 (395)
T ss_dssp             -TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EE
T ss_pred             eCCCCcccceee-ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHh
Confidence            998877765543 222233444553     24557777889999999998876654

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG1275|consensus

Probab=97.62  E-value=0.00033  Score=55.72  Aligned_cols=111  Identities=13%  Similarity=0.238  Sum_probs=76.8

Q ss_pred             EECCCCceEEEeeC---------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           8 VWSLDNKFVISASD---------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         8 ~~s~~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      +|+-.|+.|++++.         |.-|++||++.-+.+.++.-.   ....-+.|+|.-...++..+..|...+-|..+.
T Consensus       222 DfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~---~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~l  298 (1118)
T KOG1275|consen  222 DFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFP---YGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATL  298 (1118)
T ss_pred             eeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccc---cCchhhhhcccccceEEEEecccceeecccccc
Confidence            45667899998864         455789999877666555543   233567888876555555567788777774432


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                      .                          ++......+......+..+++|++++.|+.+..+|.|.+|.-
T Consensus       299 s--------------------------NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  299 S--------------------------NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             C--------------------------CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            1                          101223334444556999999999999999999999999973

>KOG4649|consensus

Probab=97.61  E-value=0.01  Score=41.10  Aligned_cols=118  Identities=8%  Similarity=-0.108  Sum_probs=78.8

Q ss_pred             EeCCCCCeEEEEecCCccEEEEeccCCCCccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcc
Q psy8758          52 SWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA  120 (198)
Q Consensus        52 ~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  120 (198)
                      ...++.+.++..|+..+.+.-.|..+....++..           -+..++.|...|.+++.+.++ +.....+.....-
T Consensus        17 VV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~t-Gs~~w~f~~~~~v   95 (354)
T KOG4649|consen   17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKT-GSQIWNFVILETV   95 (354)
T ss_pred             EEecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecc-hhheeeeeehhhh
Confidence            3445556666667788888777777655333221           123478888999999999998 6666655433222


Q ss_pred             eEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC
Q psy8758         121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL  171 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~  171 (198)
                      -......+++..+..++.|+..+..|.++..++.....+. +.-.+.+..|
T Consensus        96 k~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG-~~f~sP~i~~  145 (354)
T KOG4649|consen   96 KVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGG-GTFVSPVIAP  145 (354)
T ss_pred             ccceEEcCCCceEEEecCCCcEEEecccccceEEecccCC-ceeccceecC
Confidence            2344567889999999999999999999988877653321 2233445555

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.60  E-value=0.013  Score=42.09  Aligned_cols=155  Identities=14%  Similarity=0.158  Sum_probs=79.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.+..+.-+++|++++++.....+.-||.-.. .-.+... ....++..+.|.|++...+.+  ..+.++.=+....   
T Consensus       145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-~w~~~~r-~~~~riq~~gf~~~~~lw~~~--~Gg~~~~s~~~~~---  217 (302)
T PF14870_consen  145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-TWQPHNR-NSSRRIQSMGFSPDGNLWMLA--RGGQIQFSDDPDD---  217 (302)
T ss_dssp             --EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-S-EEEE---SSS-EEEEEE-TTS-EEEEE--TTTEEEEEE-TTE---
T ss_pred             ceeEeEEECCCCcEEEEECcccEEEEecCCCc-cceEEcc-CccceehhceecCCCCEEEEe--CCcEEEEccCCCC---
Confidence            45778888999999988866655566774211 1122222 245789999999998776653  7788777662211   


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEec--c
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT--K  159 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~--~  159 (198)
                                       ..-|.     +++..+....-.+..++|.+++...++|+. |. .+...+.|+.-.....  .
T Consensus       218 -----------------~~~w~-----~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~-l~~S~DgGktW~~~~~~~~  273 (302)
T PF14870_consen  218 -----------------GETWS-----EPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GT-LLVSTDGGKTWQKDRVGEN  273 (302)
T ss_dssp             -----------------EEEE--------B-TTSS--S-EEEEEESSSS-EEEEEST-T--EEEESSTTSS-EE-GGGTT
T ss_pred             -----------------ccccc-----cccCCcccCceeeEEEEecCCCCEEEEeCC-cc-EEEeCCCCccceECccccC
Confidence                             11111     111111222344789999999888877654 43 3455556655444422  2


Q ss_pred             CcccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         160 RMQHVTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       160 ~~~~v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      -...+..+.|.++.+-++. +.+|.+.-|
T Consensus       274 ~~~n~~~i~f~~~~~gf~l-G~~G~ll~~  301 (302)
T PF14870_consen  274 VPSNLYRIVFVNPDKGFVL-GQDGVLLRY  301 (302)
T ss_dssp             SSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             CCCceEEEEEcCCCceEEE-CCCcEEEEe
Confidence            2346888888766555554 568887655

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.59  E-value=0.013  Score=42.12  Aligned_cols=146  Identities=9%  Similarity=0.077  Sum_probs=85.8

Q ss_pred             eEEEECCCCceEEEeeC---------CCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           5 THTVWSLDNKFVISASD---------EMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~---------d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      +.+...|+|.+.++.-.         -..-.+|.+. .+...+.+...  -...+.++||||++.++.+=+..+.|.-++
T Consensus       114 ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~--~~~~NGla~SpDg~tly~aDT~~~~i~r~~  191 (307)
T COG3386         114 NDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDD--LTIPNGLAFSPDGKTLYVADTPANRIHRYD  191 (307)
T ss_pred             CceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCc--EEecCceEECCCCCEEEEEeCCCCeEEEEe
Confidence            56677788876554332         0112455554 44433333331  123478999999999888755567777777


Q ss_pred             ccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC-cEEEEEcCCCcee
Q psy8758          75 IRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK-SLRLYLAHQGHSR  153 (198)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~-~v~v~d~~~~~~~  153 (198)
                      .....             +..++          ......+....+..-.++...+|.+.+++-..| .|.+|+.. ++++
T Consensus       192 ~d~~~-------------g~~~~----------~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~  247 (307)
T COG3386         192 LDPAT-------------GPIGG----------RRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLL  247 (307)
T ss_pred             cCccc-------------CccCC----------cceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEE
Confidence            65210             00000          111222223445566788888898776544444 89999998 8887


Q ss_pred             eEEeccCcccEEEEEEc-CCCCEEE
Q psy8758         154 DIYHTKRMQHVTHTVWS-LDNKFVI  177 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s-~~~~~l~  177 (198)
                      ..+.... ..+++++|- |+.+.|.
T Consensus       248 ~~i~lP~-~~~t~~~FgG~~~~~L~  271 (307)
T COG3386         248 GEIKLPV-KRPTNPAFGGPDLNTLY  271 (307)
T ss_pred             EEEECCC-CCCccceEeCCCcCEEE
Confidence            7774443 677788884 4555443

>KOG2079|consensus

Probab=97.58  E-value=0.0061  Score=49.82  Aligned_cols=69  Identities=13%  Similarity=0.209  Sum_probs=50.6

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee-cCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM-SLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      +++|++++|+.+|++++.|-.+|.|.+||...++..+.+..+.+ ...+..+.+..++..++ ++...|.+
T Consensus       130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~ll-t~D~~Gsf  199 (1206)
T KOG2079|consen  130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLL-TSDTGGSF  199 (1206)
T ss_pred             CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEE-EccCCCce
Confidence            57899999999999999999999999999998887776665432 22344455555666454 44566653

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.58  E-value=0.0048  Score=36.87  Aligned_cols=72  Identities=17%  Similarity=0.061  Sum_probs=44.8

Q ss_pred             ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC-C--C-CEEEEecCCCeE
Q psy8758         110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL-D--N-KFVISASDEMNL  185 (198)
Q Consensus       110 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~--~-~~l~~~~~dg~v  185 (198)
                      .+..+.. ...+.++.-... ..++.+-.+|+|-+|+-....  ......  ..+.++.+.. +  | .-|++|-.+|.|
T Consensus        35 ~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~Rl--WRiKSK--~~~~~~~~~D~~gdG~~eLI~GwsnGkv  108 (111)
T PF14783_consen   35 IVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRL--WRIKSK--NQVTSMAFYDINGDGVPELIVGWSNGKV  108 (111)
T ss_pred             EEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCccee--eeeccC--CCeEEEEEEcCCCCCceEEEEEecCCeE
Confidence            4444443 456777766655 568888999999999864432  233233  3466665543 3  3 268888888877


Q ss_pred             EE
Q psy8758         186 RV  187 (198)
Q Consensus       186 ~~  187 (198)
                      -+
T Consensus       109 e~  110 (111)
T PF14783_consen  109 EV  110 (111)
T ss_pred             Ee
Confidence            43

>KOG2395|consensus

Probab=97.54  E-value=0.0024  Score=48.23  Aligned_cols=67  Identities=16%  Similarity=0.258  Sum_probs=49.0

Q ss_pred             eEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ..|.+-..+| ++++|+.+|.|++||- .+.......++-..+|..+..+.+|++|++.+ +..+.+-++
T Consensus       433 Fsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t  499 (644)
T KOG2395|consen  433 FSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT  499 (644)
T ss_pred             cceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence            4444444343 8999999999999997 55444444467778999999999999887655 556666554

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.52  E-value=0.0097  Score=41.40  Aligned_cols=115  Identities=12%  Similarity=0.171  Sum_probs=73.0

Q ss_pred             CceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecC-CCcceEEE
Q psy8758          46 LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTSV  124 (198)
Q Consensus        46 ~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~  124 (198)
                      ..+..++|+|+...|+++....+.|..++..                               ++.++.+.- .....-.+
T Consensus        22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-------------------------------G~vlr~i~l~g~~D~EgI   70 (248)
T PF06977_consen   22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD-------------------------------GKVLRRIPLDGFGDYEGI   70 (248)
T ss_dssp             S-EEEEEEETTTTEEEEEETTTTEEEEEETT---------------------------------EEEEEE-SS-SSEEEE
T ss_pred             CCccccEEcCCCCeEEEEECCCCEEEEEcCC-------------------------------CCEEEEEeCCCCCCceeE
Confidence            4589999999999999888777877777754                               344554432 23557789


Q ss_pred             EEccCCCEEEEeecCCcEEEEEcCCCc----e--eeEE----eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         125 DYSPTGREFVAGGYDKSLRLYLAHQGH----S--RDIY----HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       125 ~~sp~~~~l~~~~~d~~v~v~d~~~~~----~--~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ++.-++.++++.-.++.+.++++....    .  ...+    ...++..+-.++|+|.++.|+.+-+..-..++.++
T Consensus        71 ~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~  147 (248)
T PF06977_consen   71 TYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVN  147 (248)
T ss_dssp             EE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             EEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEc
Confidence            998888777776668999999884321    1  1111    11345678999999988777777666666666664

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PHA02713 hypothetical protein; Provisional

Probab=97.52  E-value=0.01  Score=46.55  Aligned_cols=64  Identities=14%  Similarity=0.121  Sum_probs=37.8

Q ss_pred             CCCEEEEeecC------CcEEEEEcCC-CceeeEEecc-CcccEEEEEEcCCCCEEEEecCCC--eEEEEecCCCc
Q psy8758         129 TGREFVAGGYD------KSLRLYLAHQ-GHSRDIYHTK-RMQHVTHTVWSLDNKFVISASDEM--NLRVWKAHASE  194 (198)
Q Consensus       129 ~~~~l~~~~~d------~~v~v~d~~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg--~v~~w~~~~~~  194 (198)
                      +++..+.|+.+      ..+..||..+ .+........ .......+.  -+|+..+.|+.++  .+..||+.+.+
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~--~~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL--HDNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE--ECCEEEEEeeecceeehhhcCccccc
Confidence            56777777654      2467899887 5543322111 111122222  2778888888888  78888887654

>KOG2444|consensus

Probab=97.46  E-value=0.00081  Score=45.19  Aligned_cols=103  Identities=10%  Similarity=0.061  Sum_probs=67.5

Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEE-EEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc-ccEEE
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSV-DYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM-QHVTH  166 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~-~~v~~  166 (198)
                      .++.|+.+|.|.+|.....+............+.++ .--.++.+..++..|+.|+.|+....+.+... ..|+ .++..
T Consensus        72 ~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~-g~h~~~~~e~  150 (238)
T KOG2444|consen   72 KLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV-GQHNFESGEE  150 (238)
T ss_pred             eEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeee-ccccCCCcce
Confidence            467777788877777653222222222222333332 22234557888999999999999998887765 4555 56666


Q ss_pred             EEEcCCCCEEEEe--cCCCeEEEEecCC
Q psy8758         167 TVWSLDNKFVISA--SDEMNLRVWKAHA  192 (198)
Q Consensus       167 ~~~s~~~~~l~~~--~~dg~v~~w~~~~  192 (198)
                      ...+..+++++.+  |.|..++.|++..
T Consensus       151 ~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  151 LIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             eEEecCCceEEeeccccchhhhhcchhh
Confidence            6666777777777  7888888888764

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.38  E-value=0.024  Score=40.11  Aligned_cols=157  Identities=12%  Similarity=0.079  Sum_probs=85.8

Q ss_pred             CCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceE
Q psy8758          11 LDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS   90 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~   90 (198)
                      ..++.|+.|+++| +.+++.........+..   ...|..+...|+-+.+++-  .|+.+.++++............ ..
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~---~~~I~ql~vl~~~~~llvL--sd~~l~~~~L~~l~~~~~~~~~-~~   77 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK---LSSITQLSVLPELNLLLVL--SDGQLYVYDLDSLEPVSTSAPL-AF   77 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEee---cceEEEEEEecccCEEEEE--cCCccEEEEchhhccccccccc-cc
Confidence            4578899999988 88999833332223322   3348899999988887775  3689999998764322111000 00


Q ss_pred             EEecCCCcEEEEEccCCCcceeeecCCCcceEEEE--EccCCCEEEEeecCCcEEEEEcCCC-----ceeeEEeccCccc
Q psy8758          91 AAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD--YSPTGREFVAGGYDKSLRLYLAHQG-----HSRDIYHTKRMQH  163 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~--~sp~~~~l~~~~~d~~v~v~d~~~~-----~~~~~~~~~~~~~  163 (198)
                                    .+ .............+...+  -.+.+...+.......|.+|.....     +....+..  ...
T Consensus        78 --------------~~-~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l--p~~  140 (275)
T PF00780_consen   78 --------------PK-SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL--PDP  140 (275)
T ss_pred             --------------cc-cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc--CCC
Confidence                          00 000000011122233333  1123333333444558888888763     23333322  368


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +..++|.  ++.++.+..+ ...+.|+.++.
T Consensus       141 ~~~i~~~--~~~i~v~~~~-~f~~idl~~~~  168 (275)
T PF00780_consen  141 PSSIAFL--GNKICVGTSK-GFYLIDLNTGS  168 (275)
T ss_pred             cEEEEEe--CCEEEEEeCC-ceEEEecCCCC
Confidence            8899998  4566666543 47778887654

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1832|consensus

Probab=97.37  E-value=0.00033  Score=55.88  Aligned_cols=82  Identities=16%  Similarity=0.238  Sum_probs=68.1

Q ss_pred             ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC--eEEE
Q psy8758         110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--NLRV  187 (198)
Q Consensus       110 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~v~~  187 (198)
                      ..+.+..+....+|++|+-+.++|+.|+..|.|++|++.+|...... ..|...|+.+.=+.||..+++.+.-.  ...+
T Consensus      1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~-ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV-NCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc-cccccccccccccCCcceeeeeccccCchHHH
Confidence            34556677888999999999999999999999999999999887776 68899999999999999777654432  4678


Q ss_pred             EecCC
Q psy8758         188 WKAHA  192 (198)
Q Consensus       188 w~~~~  192 (198)
                      |++.+
T Consensus      1172 W~~~s 1176 (1516)
T KOG1832|consen 1172 WDASS 1176 (1516)
T ss_pred             hcccc
Confidence            88764

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.31  E-value=0.034  Score=40.29  Aligned_cols=193  Identities=10%  Similarity=0.065  Sum_probs=109.2

Q ss_pred             eEEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEe-cCCc
Q psy8758           5 THTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAA-NEDF   68 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~-~~d~   68 (198)
                      ..+..+|+++.+++++          ..-.|.+||..+-.....+....     .......+.++.+++++++.- +-..
T Consensus        39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~  118 (342)
T PF06433_consen   39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT  118 (342)
T ss_dssp             EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred             CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence            4567899999888642          23468899998765444333221     111234567888888877642 2345


Q ss_pred             cEEEEeccCCCCccc----------cccCceEEEecCCCcEEEEEccCCCcceeee----cCCCcce-EEEEEccCCCEE
Q psy8758          69 NLYSYDIRQLNSPLN----------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH----KDMTSAV-TSVDYSPTGREF  133 (198)
Q Consensus        69 ~i~~~d~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~i-~~~~~sp~~~~l  133 (198)
                      .|-+.|+...+..-.          +..+.-+.+-..||++....+...+++....    .....++ ..-+++..+..+
T Consensus       119 SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~  198 (342)
T PF06433_consen  119 SVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRL  198 (342)
T ss_dssp             EEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEE
T ss_pred             eEEEEECCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeE
Confidence            677888776542211          1122347788889999998888655554322    1122222 234455555566


Q ss_pred             EEeecCCcEEEEEcCCCceeeEE--ec---c------CcccEEEEEEcCCCCEEEEec---CC-------CeEEEEecCC
Q psy8758         134 VAGGYDKSLRLYLAHQGHSRDIY--HT---K------RMQHVTHTVWSLDNKFVISAS---DE-------MNLRVWKAHA  192 (198)
Q Consensus       134 ~~~~~d~~v~v~d~~~~~~~~~~--~~---~------~~~~v~~~~~s~~~~~l~~~~---~d-------g~v~~w~~~~  192 (198)
                      +.-+.+|.|+-.|+.........  ..   .      ..+...-+++++..+.|+...   .+       ..|+++|+.+
T Consensus       199 ~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t  278 (342)
T PF06433_consen  199 YFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKT  278 (342)
T ss_dssp             EEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTT
T ss_pred             EEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCC
Confidence            66788999999998876543221  10   0      012233467777655444331   12       2488999999


Q ss_pred             Ccccc
Q psy8758         193 SEKLE  197 (198)
Q Consensus       193 ~~~~~  197 (198)
                      ++.+.
T Consensus       279 ~krv~  283 (342)
T PF06433_consen  279 HKRVA  283 (342)
T ss_dssp             TEEEE
T ss_pred             CeEEE
Confidence            88763

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.29  E-value=0.03  Score=39.26  Aligned_cols=147  Identities=17%  Similarity=0.188  Sum_probs=81.2

Q ss_pred             ceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEe-ccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD-IRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d-~~~~~~   80 (198)
                      .+...+++++++.++... .++.-.||-...+.....+.   ....+....|++++...++ ...+....++. ..... 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~---~g~~l~~PS~d~~g~~W~v-~~~~~~~~~~~~~~~g~-   99 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL---TGGSLTRPSWDPDGWVWTV-DDGSGGVRVVRDSASGT-   99 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec---cCCccccccccCCCCEEEE-EcCCCceEEEEecCCCc-
Confidence            477899999999777665 22233344333333223332   2336778889999665544 33444444442 11110 


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee---cCCcEEEEEcCC---Ccee
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG---YDKSLRLYLAHQ---GHSR  153 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~---~d~~v~v~d~~~---~~~~  153 (198)
                                                 ..+...- ......|..+.+||||..++...   .++.|.+=-+..   +...
T Consensus       100 ---------------------------~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~  152 (253)
T PF10647_consen  100 ---------------------------GEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPR  152 (253)
T ss_pred             ---------------------------ceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcc
Confidence                                       1111111 11112899999999999777654   346676665432   2111


Q ss_pred             eE-----EeccCcccEEEEEEcCCCCEEEEecC
Q psy8758         154 DI-----YHTKRMQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       154 ~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~  181 (198)
                      ..     ........+.+++|.+++.+++.+..
T Consensus       153 ~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~  185 (253)
T PF10647_consen  153 RLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRS  185 (253)
T ss_pred             eeccceEecccccCcceeeeecCCCEEEEEeCC
Confidence            11     11122468899999999987766543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.26  E-value=0.058  Score=42.09  Aligned_cols=55  Identities=15%  Similarity=0.040  Sum_probs=34.0

Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+.=+|+.+++......... ....+. ..-.+.+++.+..+|.++.+|.+||+.+
T Consensus       441 g~l~AiD~~tGk~~W~~~~~~-p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~l  495 (527)
T TIGR03075       441 GSLIAWDPITGKIVWEHKEDF-PLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEEL  495 (527)
T ss_pred             eeEEEEeCCCCceeeEecCCC-CCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEe
Confidence            346667777777665542221 111111 1124456667888999999999999986

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=97.22  E-value=0.05  Score=40.42  Aligned_cols=60  Identities=13%  Similarity=0.139  Sum_probs=37.1

Q ss_pred             cceEEEEEccCCCEEEEeecC-------------------CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         119 SAVTSVDYSPTGREFVAGGYD-------------------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d-------------------~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .....++|.|||.+.++-+..                   +.|.-++...++. ..+..++ .....++|+|+|+++++-
T Consensus       124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~-e~~a~G~-rnp~Gl~~d~~G~l~~td  201 (367)
T TIGR02604       124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKL-RVVAHGF-QNPYGHSVDSWGDVFFCD  201 (367)
T ss_pred             ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeE-EEEecCc-CCCccceECCCCCEEEEc
Confidence            346789999999866654421                   3455555555443 2332332 345789999999987764


Q ss_pred             c
Q psy8758         180 S  180 (198)
Q Consensus       180 ~  180 (198)
                      .
T Consensus       202 n  202 (367)
T TIGR02604       202 N  202 (367)
T ss_pred             c
Confidence            4

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG4499|consensus

Probab=97.18  E-value=0.036  Score=37.93  Aligned_cols=103  Identities=12%  Similarity=0.180  Sum_probs=71.8

Q ss_pred             eeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc
Q psy8758          49 NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP  128 (198)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp  128 (198)
                      +.++|+.+.+.+...-+.+-+|.-||....             +|.-...=.++|++. .++......     -.++...
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~-------------tG~~snr~~i~dlrk-~~~~e~~~P-----DGm~ID~  221 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCP-------------TGDLSNRKVIFDLRK-SQPFESLEP-----DGMTIDT  221 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCC-------------cccccCcceeEEecc-CCCcCCCCC-----CcceEcc
Confidence            688999888888877777888877774422             122223334677776 344333322     2345566


Q ss_pred             CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC
Q psy8758         129 TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL  171 (198)
Q Consensus       129 ~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~  171 (198)
                      +|.+.+++-..++|...|..+|+.+..+... ...+++++|--
T Consensus       222 eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP-t~qitsccFgG  263 (310)
T KOG4499|consen  222 EGNLYVATFNGGTVQKVDPTTGKILLEIKLP-TPQITSCCFGG  263 (310)
T ss_pred             CCcEEEEEecCcEEEEECCCCCcEEEEEEcC-CCceEEEEecC
Confidence            8888888888899999999999998887433 57899999964

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.16  E-value=0.073  Score=41.25  Aligned_cols=124  Identities=12%  Similarity=0.182  Sum_probs=70.1

Q ss_pred             ceeeEEeCCC----CCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceE
Q psy8758          47 RSNMVSWNPM----EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVT  122 (198)
Q Consensus        47 ~v~~~~~~~~----~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~  122 (198)
                      .|..+.|.|-    .+.+++. .....|.+|.+....              .+.++..+-      +....-+..+--..
T Consensus        58 hV~GlsW~P~~~~~~paLLAV-QHkkhVtVWqL~~s~--------------~e~~K~l~s------QtcEi~e~~pvLpQ  116 (671)
T PF15390_consen   58 HVHGLSWAPPCTADTPALLAV-QHKKHVTVWQLCPST--------------TERNKLLMS------QTCEIREPFPVLPQ  116 (671)
T ss_pred             eeeeeeecCcccCCCCceEEE-eccceEEEEEeccCc--------------cccccceee------eeeeccCCcccCCC
Confidence            4788999985    4455555 467788888875321              011110000      00000011111234


Q ss_pred             EEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecC
Q psy8758         123 SVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAH  191 (198)
Q Consensus       123 ~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~  191 (198)
                      .+.|+|....|++-.....-.+++++.............+.|.+.+|.+||+.|+.+- ..=.-++||-.
T Consensus       117 GCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  117 GCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             cccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            5789999888877665554456676654433333234457899999999999877653 22335677753

>KOG4441|consensus

Probab=97.13  E-value=0.087  Score=41.58  Aligned_cols=176  Identities=14%  Similarity=0.090  Sum_probs=92.0

Q ss_pred             CCceEEEeeCC------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC------ccEEEEeccCCC
Q psy8758          12 DNKFVISASDE------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED------FNLYSYDIRQLN   79 (198)
Q Consensus        12 ~~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d------~~i~~~d~~~~~   79 (198)
                      .+..++.|+.+      ..+..||..++... .+........-.+++...  ..++++|+.+      ..+..||.+...
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~-~~a~m~~~r~~~~~~~~~--~~lYv~GG~~~~~~~l~~ve~YD~~~~~  360 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWS-SLAPMPSPRCRVGVAVLN--GKLYVVGGYDSGSDRLSSVERYDPRTNQ  360 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEe-ecCCCCcccccccEEEEC--CEEEEEccccCCCcccceEEEecCCCCc
Confidence            34567777766      35778887766322 222211222223444443  3677777777      346778876544


Q ss_pred             Cc-------------cccccCceEEEecCCCc-----EEEEEccCCCcceeeecCCCcceEEE-EEccCCCEEEEeecCC
Q psy8758          80 SP-------------LNVHKDMTSAAANEDFN-----LYSYDIRQLNSPLNVHKDMTSAVTSV-DYSPTGREFVAGGYDK  140 (198)
Q Consensus        80 ~~-------------~~~~~~~~~~~~~~~~~-----i~~~d~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~~~~d~  140 (198)
                      -.             .....+.++++|+.||.     +-.||.++ .+-...- ......... .-.-+|+..++|+.++
T Consensus       361 W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~-~~W~~va-~m~~~r~~~gv~~~~g~iYi~GG~~~  438 (571)
T KOG4441|consen  361 WTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVT-NKWTPVA-PMLTRRSGHGVAVLGGKLYIIGGGDG  438 (571)
T ss_pred             eeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCC-CcccccC-CCCcceeeeEEEEECCEEEEEcCcCC
Confidence            11             11234467888888865     56677765 2211111 111111222 1223677888888553


Q ss_pred             ------cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC-----eEEEEecCCC
Q psy8758         141 ------SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM-----NLRVWKAHAS  193 (198)
Q Consensus       141 ------~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~v~~w~~~~~  193 (198)
                            ++..||..+.+....-.......-..++ .-++.+.+.|+.|+     +|..||..+.
T Consensus       439 ~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~  501 (571)
T KOG4441|consen  439 SSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETN  501 (571)
T ss_pred             CccccceEEEEcCCCCceeecCCcccccccceEE-EECCEEEEECCccCCCccceEEEEcCCCC
Confidence                  5788998887654432111000111122 23667777777665     3677777654

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.05  E-value=0.1  Score=40.84  Aligned_cols=179  Identities=12%  Similarity=0.047  Sum_probs=102.6

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCce----------eeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS----------NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      +..++.++.++.|.-+|..+++.+-.+..... ..+          ..+++.  +..+++ ++.++.+.-+|.++.+...
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~-~~~~~~~~~~~~~rg~av~--~~~v~v-~t~dg~l~ALDa~TGk~~W  144 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLP-DDVIPVMCCDVVNRGVALY--DGKVFF-GTLDARLVALDAKTGKVVW  144 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCC-cccccccccccccccceEE--CCEEEE-EcCCCEEEEEECCCCCEEe
Confidence            34666677788899999998876554432110 001          011221  234444 4578888888887655432


Q ss_pred             ccc-----------c-----CceEEEec------CCCcEEEEEccCCCcceeeecCCCc---------------------
Q psy8758          83 NVH-----------K-----DMTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTS---------------------  119 (198)
Q Consensus        83 ~~~-----------~-----~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~---------------------  119 (198)
                      ...           .     +..++.+.      .+|.|..+|.++ ++.+-.+..-..                     
T Consensus       145 ~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~T-G~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw  223 (527)
T TIGR03075       145 SKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKT-GKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTW  223 (527)
T ss_pred             ecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCC-CceeEeccCcCCCcccccccccccccccccCCC
Confidence            211           0     11233332      368899999887 555544321110                     


Q ss_pred             -----------ceEEEEEccCCCEEEEeecC----------------CcEEEEEcCCCceeeEEec-cCc-------ccE
Q psy8758         120 -----------AVTSVDYSPTGREFVAGGYD----------------KSLRLYLAHQGHSRDIYHT-KRM-------QHV  164 (198)
Q Consensus       120 -----------~i~~~~~sp~~~~l~~~~~d----------------~~v~v~d~~~~~~~~~~~~-~~~-------~~v  164 (198)
                                 .-..+++.|...++..+..+                ..|.-.|+++|+....+.. .|.       ...
T Consensus       224 ~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p  303 (527)
T TIGR03075       224 PGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEM  303 (527)
T ss_pred             CCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCc
Confidence                       01235677766655554321                1577778889988766632 221       111


Q ss_pred             EEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         165 THTVWSLDNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       165 ~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .=+....+|+   .++.+..+|.+++.|-.+|+.+
T Consensus       304 ~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       304 ILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             EEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            1122334666   7778999999999999999976

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.04  E-value=0.071  Score=38.81  Aligned_cols=152  Identities=13%  Similarity=0.057  Sum_probs=80.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++-- ++. ++++. .+.|.+|++...+.+...........+.++...  ++++++ |+....+.++.....   
T Consensus        89 g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~v-gD~~~sv~~~~~~~~---  159 (321)
T PF03178_consen   89 GPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILV-GDAMKSVSLLRYDEE---  159 (321)
T ss_dssp             S-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEE-EESSSSEEEEEEETT---
T ss_pred             CcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEE-EEcccCEEEEEEEcc---
Confidence            456776665 444 44443 468999999877622333222223344444443  455554 455556665543321   


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC-------Cc-
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-------GH-  151 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~-------~~-  151 (198)
                                                ...+..+  ...+..++++.+-++++.++.+..+|.+.++....       +. 
T Consensus       160 --------------------------~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~  213 (321)
T PF03178_consen  160 --------------------------NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDP  213 (321)
T ss_dssp             --------------------------TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTT
T ss_pred             --------------------------CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccc
Confidence                                      1222222  22355688888887777999999999999998873       22 


Q ss_pred             -eeeEEeccCcccEEEE---EEcCC--CC------EEEEecCCCeEEEE
Q psy8758         152 -SRDIYHTKRMQHVTHT---VWSLD--NK------FVISASDEMNLRVW  188 (198)
Q Consensus       152 -~~~~~~~~~~~~v~~~---~~s~~--~~------~l~~~~~dg~v~~w  188 (198)
                       ............|+++   .+.|.  +.      .++.++.+|.|...
T Consensus       214 ~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  214 KLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             BEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             cceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence             2222222223667777   55552  22      36777788888743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PHA03098 kelch-like protein; Provisional

Probab=97.00  E-value=0.11  Score=40.62  Aligned_cols=63  Identities=14%  Similarity=0.306  Sum_probs=35.1

Q ss_pred             CCCEEEEeecC--------CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCC
Q psy8758         129 TGREFVAGGYD--------KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHAS  193 (198)
Q Consensus       129 ~~~~l~~~~~d--------~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~  193 (198)
                      +++.++.|+.+        ..+.+||..+.+....-..... .....+.  .+++.++.|+.+     +.+.+||..+.
T Consensus       437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence            56667777643        2388899887665433211111 1111122  267777777654     47888988764

>KOG2444|consensus

Probab=96.99  E-value=0.0054  Score=41.38  Aligned_cols=105  Identities=8%  Similarity=-0.016  Sum_probs=58.6

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCe--EEEEecCCccEEEEeccCCCCccccccCceE
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAF--VFTAANEDFNLYSYDIRQLNSPLNVHKDMTS   90 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~   90 (198)
                      +..++.|+.+|.|.+|............... ...+.+.  -|.++.  +..++..++.|+.|++..             
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~-~e~i~~~--Ip~~~~~~~~c~~~~dg~ir~~n~~p-------------  133 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSG-EESIDLG--IPNGRDSSLGCVGAQDGRIRACNIKP-------------  133 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcc-cccceec--cccccccceeEEeccCCceeeecccc-------------
Confidence            4567888899999999875221111111110 1112111  233333  555566777777777654             


Q ss_pred             EEecCCCcEEEEEccCCCcceeeecCCC-cceEEEEEccCCCEEEEe--ecCCcEEEEEcCCC
Q psy8758          91 AAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFVAG--GYDKSLRLYLAHQG  150 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~--~~d~~v~v~d~~~~  150 (198)
                                       .+.+-....|. .+......+..+++++.+  |.|..++.|++..-
T Consensus       134 -----------------~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  134 -----------------NKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             -----------------CceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence                             23333334444 445555555666777777  77888888887653

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=96.98  E-value=0.055  Score=40.52  Aligned_cols=146  Identities=12%  Similarity=0.073  Sum_probs=64.0

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcE
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNL   99 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i   99 (198)
                      ..++.+||+.+.+..+.+........+..+.|  .|+..+=|+.+--..+|+.|--.... .+.           ....|
T Consensus       221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g-~W~-----------a~kVi  288 (461)
T PF05694_consen  221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDG-EWA-----------AEKVI  288 (461)
T ss_dssp             --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETT-EEE-----------EEEEE
T ss_pred             cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCC-Cee-----------eeEEE
Confidence            46899999998887666654322223445555  55666666655456666655432110 000           00001


Q ss_pred             EEEEccCC----CcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEEEEcCCCceeeEE---eccC-----------
Q psy8758         100 YSYDIRQL----NSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRDIY---HTKR-----------  160 (198)
Q Consensus       100 ~~~d~~~~----~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~~~~~~---~~~~-----------  160 (198)
                      .+-+..-.    ...++.+..-+.-++.|.+|.|.++|..+. .+|.++.||+.........   ..+.           
T Consensus       289 ~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~  368 (461)
T PF05694_consen  289 DIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVK  368 (461)
T ss_dssp             EE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS-
T ss_pred             ECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCcccc
Confidence            11000000    011112222245689999999999887655 5899999999875433322   1110           


Q ss_pred             ----cccEEEEEEcCCCCEEEEe
Q psy8758         161 ----MQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       161 ----~~~v~~~~~s~~~~~l~~~  179 (198)
                          .+...-+..|-||+.|...
T Consensus       369 g~~l~GgPqMvqlS~DGkRlYvT  391 (461)
T PF05694_consen  369 GKRLRGGPQMVQLSLDGKRLYVT  391 (461)
T ss_dssp             -----S----EEE-TTSSEEEEE
T ss_pred             ccccCCCCCeEEEccCCeEEEEE
Confidence                1234667889999977654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.94  E-value=0.0054  Score=29.80  Aligned_cols=30  Identities=10%  Similarity=0.131  Sum_probs=25.5

Q ss_pred             cEEEEEEcCCC---CEEEEecCCCeEEEEecCC
Q psy8758         163 HVTHTVWSLDN---KFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       163 ~v~~~~~s~~~---~~l~~~~~dg~v~~w~~~~  192 (198)
                      .++++.|||++   .+|+.+-.-|.|.++|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            58899999854   4888888889999999984

It contains a characteristic DLL sequence motif.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.94  E-value=0.075  Score=37.60  Aligned_cols=167  Identities=10%  Similarity=0.163  Sum_probs=97.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|.++.|+|+.+.|++..+...-.++=-..|+.+..+.-.. -...-.+.+..++++.++ -..++.+.++.+....  
T Consensus        86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-~~DpE~Ieyig~n~fvi~-dER~~~l~~~~vd~~t--  161 (316)
T COG3204          86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-FSDPETIEYIGGNQFVIV-DERDRALYLFTVDADT--  161 (316)
T ss_pred             ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccc-cCChhHeEEecCCEEEEE-ehhcceEEEEEEcCCc--
Confidence            348899999999988888777666666555677666654332 222356777776666654 3567777776655321  


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce-eeEE-ecc
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS-RDIY-HTK  159 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~-~~~~-~~~  159 (198)
                                      .+..  ++...-++............++|+|..+.|..+-.-+-+.||....+.. ...- ...
T Consensus       162 ----------------~~~~--~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~  223 (316)
T COG3204         162 ----------------TVIS--AKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLD  223 (316)
T ss_pred             ----------------cEEe--ccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccC
Confidence                            1111  1110111222222245577899999988888887777777877764331 1110 011


Q ss_pred             C-------cccEEEEEEcCCCC-EEEEecCCCeEEEEec
Q psy8758         160 R-------MQHVTHTVWSLDNK-FVISASDEMNLRVWKA  190 (198)
Q Consensus       160 ~-------~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~  190 (198)
                      +       -..|.++.|++... +|+-+.+++.+.-.|.
T Consensus       224 ~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~  262 (316)
T COG3204         224 PTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDL  262 (316)
T ss_pred             cccccceEeeccccceecCCCCcEEEEecCCceEEEEec
Confidence            1       13577888887544 5555556666655554

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=96.94  E-value=0.095  Score=38.78  Aligned_cols=182  Identities=16%  Similarity=0.217  Sum_probs=81.3

Q ss_pred             EECCCCceEEEeeC-C--CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--c
Q psy8758           8 VWSLDNKFVISASD-E--MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--L   82 (198)
Q Consensus         8 ~~s~~~~~l~~~~~-d--~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~   82 (198)
                      +|.++|+.|+.++. |  ..+.+.|+.+++. ..+..... .......++|+++.++..- .+..++-.|+++.+..  +
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i-~QLTdg~g-~~~~g~~~s~~~~~~~Yv~-~~~~l~~vdL~T~e~~~vy  118 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEI-TQLTDGPG-DNTFGGFLSPDDRALYYVK-NGRSLRRVDLDTLEERVVY  118 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EE-EE---SS--B-TTT-EE-TTSSEEEEEE-TTTEEEEEETTT--EEEEE
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEE-EECccCCC-CCccceEEecCCCeEEEEE-CCCeEEEEECCcCcEEEEE
Confidence            57889976665553 4  4677778877763 33332211 2233567789888887753 5568888888876542  1


Q ss_pred             ccccCce---EEEecCCCc--------------------------------EEEEEccCCCcceeeecCCCcceEEEEEc
Q psy8758          83 NVHKDMT---SAAANEDFN--------------------------------LYSYDIRQLNSPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        83 ~~~~~~~---~~~~~~~~~--------------------------------i~~~d~~~~~~~~~~~~~~~~~i~~~~~s  127 (198)
                      .......   -.+...|++                                |.-.|+.+ ++. +.+......+.-+.||
T Consensus       119 ~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t-G~~-~~v~~~~~wlgH~~fs  196 (386)
T PF14583_consen  119 EVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT-GER-KVVFEDTDWLGHVQFS  196 (386)
T ss_dssp             E--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT---E-EEEEEESS-EEEEEEE
T ss_pred             ECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC-Cce-eEEEecCccccCcccC
Confidence            1111111   111122222                                33445544 332 3333345567788999


Q ss_pred             cCCC-EEEEeec---CC-cEEEEEcCC--CceeeEEeccCcccEEEEEEcCCCCEEEE-----ecCCCeEEEEecCCCc
Q psy8758         128 PTGR-EFVAGGY---DK-SLRLYLAHQ--GHSRDIYHTKRMQHVTHTVWSLDNKFVIS-----ASDEMNLRVWKAHASE  194 (198)
Q Consensus       128 p~~~-~l~~~~~---d~-~v~v~d~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-----~~~dg~v~~w~~~~~~  194 (198)
                      |... .|+.|-.   +. .-|||-+++  ..............+..=-|.|||..|.-     ++.+..|.-+|+.+++
T Consensus       197 P~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~  275 (386)
T PF14583_consen  197 PTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGE  275 (386)
T ss_dssp             TTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--
T ss_pred             CCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCC
Confidence            9755 4444432   22 235665543  22222211222345666678999986543     2334567777777765

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.90  E-value=0.019  Score=43.05  Aligned_cols=80  Identities=18%  Similarity=0.151  Sum_probs=53.7

Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC---C--------------CCEE-EE
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL---D--------------NKFV-IS  178 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~---~--------------~~~l-~~  178 (198)
                      ....+.+++.+|++++.|+...-|.|.++|+.++..+...+.-....+.-+....   .              ..+| +-
T Consensus       306 ~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIy  385 (415)
T PF14655_consen  306 SKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIY  385 (415)
T ss_pred             CCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEE
Confidence            3455889999999999999888899999999998877665222111111111110   0              1123 34


Q ss_pred             ecCCCeEEEEecCCCccc
Q psy8758         179 ASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       179 ~~~dg~v~~w~~~~~~~~  196 (198)
                      +-.-|.|.||.+++|..+
T Consensus       386 aprRg~lEvW~~~~g~Rv  403 (415)
T PF14655_consen  386 APRRGILEVWSMRQGPRV  403 (415)
T ss_pred             eccCCeEEEEecCCCCEE
Confidence            566899999999999876

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.89  E-value=0.18  Score=41.17  Aligned_cols=182  Identities=10%  Similarity=0.054  Sum_probs=102.8

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecC------ceeeEEeCC----------------CCCeEEEEecCCccE
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL------RSNMVSWNP----------------MEAFVFTAANEDFNL   70 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~------~v~~~~~~~----------------~~~~~~~~~~~d~~i   70 (198)
                      +..++.++.++.|.-.|..+++..-.+.......      ....+.+..                .+..++. ++.|+.+
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~-~T~Dg~L  272 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIIL-PTSDARL  272 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEE-ecCCCeE
Confidence            4467777788889989998887655543211100      011222211                2235554 4578888


Q ss_pred             EEEeccCCCCccccc----------------------c-----CceEEEec----------CCCcEEEEEccCCCcceee
Q psy8758          71 YSYDIRQLNSPLNVH----------------------K-----DMTSAAAN----------EDFNLYSYDIRQLNSPLNV  113 (198)
Q Consensus        71 ~~~d~~~~~~~~~~~----------------------~-----~~~~~~~~----------~~~~i~~~d~~~~~~~~~~  113 (198)
                      .-.|.++.+......                      .     +..++.++          .+|.|+-+|.++ ++.+-.
T Consensus       273 iALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~T-Gkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNT-GALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCC-CcEeeE
Confidence            888877665442110                      0     12344443          268899999988 566554


Q ss_pred             ecCC---------C--------cc-eEEEEEccCCCEEEEee------------------cCCcEEEEEcCCCceeeEEe
Q psy8758         114 HKDM---------T--------SA-VTSVDYSPTGREFVAGG------------------YDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus       114 ~~~~---------~--------~~-i~~~~~sp~~~~l~~~~------------------~d~~v~v~d~~~~~~~~~~~  157 (198)
                      +...         .        .. -..++++|....+..+.                  ..+.|.-.|.++|+....+.
T Consensus       352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q  431 (764)
T TIGR03074       352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ  431 (764)
T ss_pred             EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence            4210         0        00 13345666544443321                  12457777888888877663


Q ss_pred             ccCc--------ccEEEEEEcC-CCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         158 TKRM--------QHVTHTVWSL-DNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       158 ~~~~--------~~v~~~~~s~-~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..|.        ....=+.+.. +|+   .++.++.+|.+++.|-+||+.+
T Consensus       432 ~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l  482 (764)
T TIGR03074       432 TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPI  482 (764)
T ss_pred             ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEE
Confidence            3221        0111122222 563   7888999999999999999976

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.88  E-value=0.081  Score=37.43  Aligned_cols=117  Identities=10%  Similarity=0.163  Sum_probs=76.8

Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecC-CCcceEE
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTS  123 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~  123 (198)
                      ...+.++.|+|+.+.||++....-.|.-.+.+                               ++.+.+++- .-.....
T Consensus        85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~-------------------------------GdlirtiPL~g~~DpE~  133 (316)
T COG3204          85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKE-------------------------------GDLIRTIPLTGFSDPET  133 (316)
T ss_pred             cccccceeeCCCcceEEEecCCCceEEEEecC-------------------------------CceEEEecccccCChhH
Confidence            34489999999999999987555555444443                               455555431 1223456


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCCCceeeEE--------eccC-cccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--------HTKR-MQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~--------~~~~-~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      +.+.-+|++.++-=.++.+.++.+.........        ...+ +.....++|+|....|..+-+-+-+.||.+..
T Consensus       134 Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~  211 (316)
T COG3204         134 IEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQ  211 (316)
T ss_pred             eEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEec
Confidence            777777777777777888888877654221111        1122 46778899999888888787777777777653

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.83  E-value=0.096  Score=41.44  Aligned_cols=117  Identities=13%  Similarity=0.145  Sum_probs=65.9

Q ss_pred             CCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeC--CCCCeEEEEecCCccEEEEeccCCCCccccccC
Q psy8758          10 SLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWN--PMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKD   87 (198)
Q Consensus        10 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~   87 (198)
                      |.-++..++-+....+.|||...+..... ..+...+.|.++.|.  |+++.+++.| ....|.+|........-..   
T Consensus        38 ss~~k~a~V~~~~~~LtIWD~~~~~lE~~-~~f~~~~~I~dLDWtst~d~qsiLaVG-f~~~v~l~~Q~R~dy~~~~---  112 (631)
T PF12234_consen   38 SSIKKIAVVDSSRSELTIWDTRSGVLEYE-ESFSEDDPIRDLDWTSTPDGQSILAVG-FPHHVLLYTQLRYDYTNKG---  112 (631)
T ss_pred             cccCcEEEEECCCCEEEEEEcCCcEEEEe-eeecCCCceeeceeeecCCCCEEEEEE-cCcEEEEEEccchhhhcCC---
Confidence            34344333334455789999977652221 222346788999884  6889999886 7788888865321100000   


Q ss_pred             ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          88 MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        88 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                            ..=..++-.|++       .++  +.+|.+..|-++|.+++.++  +.+.|+|-.
T Consensus       113 ------p~w~~i~~i~i~-------~~T--~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  113 ------PSWAPIRKIDIS-------SHT--PHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             ------cccceeEEEEee-------cCC--CCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence                  000011111111       112  25688999999997666543  567777643

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.83  E-value=0.092  Score=36.87  Aligned_cols=111  Identities=14%  Similarity=0.084  Sum_probs=67.1

Q ss_pred             ceeeEEeCCCCCeEEEEe--cCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEE
Q psy8758          47 RSNMVSWNPMEAFVFTAA--NEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSV  124 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~  124 (198)
                      .+.+.+++++++.+++..  .....++++...                               ........  ...+...
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~-------------------------------~~~~~~~~--g~~l~~P   71 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG-------------------------------GPVRPVLT--GGSLTRP   71 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCC-------------------------------Ccceeecc--CCccccc
Confidence            578899999999887765  222333333322                               12222222  2367788


Q ss_pred             EEccCCCEEEEeecCCcEEEEE-cCCCceeeE-EeccCc-ccEEEEEEcCCCCEEEEec---CCCeEEEEec
Q psy8758         125 DYSPTGREFVAGGYDKSLRLYL-AHQGHSRDI-YHTKRM-QHVTHTVWSLDNKFVISAS---DEMNLRVWKA  190 (198)
Q Consensus       125 ~~sp~~~~l~~~~~d~~v~v~d-~~~~~~~~~-~~~~~~-~~v~~~~~s~~~~~l~~~~---~dg~v~~w~~  190 (198)
                      +|++++...+....+...+++. ...+..... ...... ..|..+.+||||..+|...   .++.|.+=-+
T Consensus        72 S~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V  143 (253)
T PF10647_consen   72 SWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV  143 (253)
T ss_pred             cccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence            9999988777776666666664 333333222 111111 2899999999999877554   3567776544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG4441|consensus

Probab=96.81  E-value=0.18  Score=39.91  Aligned_cols=175  Identities=10%  Similarity=0.104  Sum_probs=90.0

Q ss_pred             CCceEEEeeCC------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc-----EEEEeccCCCC
Q psy8758          12 DNKFVISASDE------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN-----LYSYDIRQLNS   80 (198)
Q Consensus        12 ~~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-----i~~~d~~~~~~   80 (198)
                      ++...++|+.|      ..+..||..+.+-.. +...  ..+-..+....-+..+++.|+.||.     +-.||..+.+-
T Consensus       332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M--~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W  408 (571)
T KOG4441|consen  332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPM--NTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKW  408 (571)
T ss_pred             CCEEEEEccccCCCcccceEEEecCCCCceec-cCCc--cCccccceeEEECCEEEEEeccccccccccEEEecCCCCcc
Confidence            45677788877      356677776655222 1111  1111122222234566666777754     56677765442


Q ss_pred             cc-------------ccccCceEEEecCCC------cEEEEEccCCC-cceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          81 PL-------------NVHKDMTSAAANEDF------NLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        81 ~~-------------~~~~~~~~~~~~~~~------~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                      ..             ....+.++++|+.++      ++..||..+.. ..+..............  -++...+.|+.|+
T Consensus       409 ~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~--~~~~iYvvGG~~~  486 (571)
T KOG4441|consen  409 TPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAV--LNGKIYVVGGFDG  486 (571)
T ss_pred             cccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEE--ECCEEEEECCccC
Confidence            21             122345677777554      35677776521 11222211112222222  2577788888776


Q ss_pred             -----cEEEEEcCCCceeeEEeccCcccEEEEEE-cCCCCEEEEecCCC-----eEEEEecCCC
Q psy8758         141 -----SLRLYLAHQGHSRDIYHTKRMQHVTHTVW-SLDNKFVISASDEM-----NLRVWKAHAS  193 (198)
Q Consensus       141 -----~v~v~d~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg-----~v~~w~~~~~  193 (198)
                           +|..||..+.+....-....  +...+.. .-+++..+.|+.||     +|..||..+.
T Consensus       487 ~~~~~~VE~ydp~~~~W~~v~~m~~--~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  487 TSALSSVERYDPETNQWTMVAPMTS--PRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             CCccceEEEEcCCCCceeEcccCcc--ccccccEEEECCEEEEEecccCccccceeEEcCCCCC
Confidence                 37788888877655431121  1111111 22566777777775     4777776654

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.76  E-value=0.1  Score=36.52  Aligned_cols=154  Identities=6%  Similarity=0.002  Sum_probs=83.2

Q ss_pred             EEEECCCCceEEEeeCCC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           6 HTVWSLDNKFVISASDEM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      .+.|..+|.++-+.+.-|  .|+.+|+.+++......-. ....--.+...  +..++--.-.++...+||..+      
T Consensus        49 GL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~-~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~t------  119 (264)
T PF05096_consen   49 GLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLP-PRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNT------  119 (264)
T ss_dssp             EEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-T-TT--EEEEEEE--TTEEEEEESSSSEEEEEETTT------
T ss_pred             cEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECC-ccccceeEEEE--CCEEEEEEecCCeEEEEcccc------
Confidence            455656677666666544  6888888888754333221 11111122222  222222223455555555543      


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc-C--
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK-R--  160 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~-~--  160 (198)
                                              -+++..+.. ...-..++  .|++.|+.+.....++++|..+.+....+... .  
T Consensus       120 ------------------------l~~~~~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~  172 (264)
T PF05096_consen  120 ------------------------LKKIGTFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGR  172 (264)
T ss_dssp             ------------------------TEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTE
T ss_pred             ------------------------ceEEEEEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCE
Confidence                                    345555542 23445555  57788888877889999998887665554211 1  


Q ss_pred             -cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         161 -MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       161 -~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                       -..++.+.|- +|...|=.-....|..-|..+|+.+
T Consensus       173 pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~  208 (264)
T PF05096_consen  173 PVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVV  208 (264)
T ss_dssp             E---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEE
T ss_pred             ECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEE
Confidence             1356778886 6766666666778888888888765

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG3630|consensus

Probab=96.76  E-value=0.017  Score=47.79  Aligned_cols=144  Identities=15%  Similarity=0.215  Sum_probs=82.9

Q ss_pred             eeEEEECCCCceEEEe--eCCCeEEEEEccCCce-----eeeeeeee----ecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           4 VTHTVWSLDNKFVISA--SDEMNLRVWKAHASEK-----LGPIRKVV----MSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~-----~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      +..+..++|++..++.  +++-.|..||+.+-..     ...+..+.    ......++.|+|.-..-.++...|+.|.+
T Consensus       103 i~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V  182 (1405)
T KOG3630|consen  103 IVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRV  182 (1405)
T ss_pred             ceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhh
Confidence            4555667777654443  3444778888864221     11111111    12233566777765544444445666655


Q ss_pred             EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                      ..+...                             ......+ ......++++|+|.|+.++.|-..|++.-|-..-. .
T Consensus       183 ~~~~~~-----------------------------~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~le-i  231 (1405)
T KOG3630|consen  183 KSTKQL-----------------------------AQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLE-I  231 (1405)
T ss_pred             hhhhhh-----------------------------hhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecccc-e
Confidence            554432                             2233332 23456899999999999999999999988865432 1


Q ss_pred             eeEEe---ccCcccEEEEEEcCCCCEEEE
Q psy8758         153 RDIYH---TKRMQHVTHTVWSLDNKFVIS  178 (198)
Q Consensus       153 ~~~~~---~~~~~~v~~~~~s~~~~~l~~  178 (198)
                      ...+.   ......|.++.|-....+++.
T Consensus       232 k~~ip~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  232 KSEIPEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             eecccCCCcCCCcceeEEEEecceeEEEE
Confidence            11111   111368999999887777664

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.70  E-value=0.088  Score=42.55  Aligned_cols=75  Identities=12%  Similarity=0.203  Sum_probs=52.3

Q ss_pred             CcceEEEEEccCCCEEEEeecCCcEEEEEcCC----------CceeeE---E-------eccCcccEEEEEEcCC---CC
Q psy8758         118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ----------GHSRDI---Y-------HTKRMQHVTHTVWSLD---NK  174 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~----------~~~~~~---~-------~~~~~~~v~~~~~s~~---~~  174 (198)
                      .-.|..+.++|+|++++..|..+ |.|-.+..          ++....   +       ...+...|..+.|+|.   +.
T Consensus        84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            34688999999999999888766 44444432          111000   0       1233457999999996   46


Q ss_pred             EEEEecCCCeEEEEecCCC
Q psy8758         175 FVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       175 ~l~~~~~dg~v~~w~~~~~  193 (198)
                      .|+.-..|+++++||+...
T Consensus       163 ~l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             eEEEEecCCEEEEEecCCC
Confidence            8888889999999999753

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.67  E-value=0.015  Score=28.28  Aligned_cols=31  Identities=10%  Similarity=0.116  Sum_probs=25.5

Q ss_pred             cceeEEEECCCC---ceEEEeeCCCeEEEEEccC
Q psy8758           2 QHVTHTVWSLDN---KFVISASDEMNLRVWKAHA   32 (198)
Q Consensus         2 ~~v~~~~~s~~~---~~l~~~~~d~~i~i~~~~~   32 (198)
                      |+|.+++|||+.   .+|+.+-.-+.+.|+|+.+
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            579999999854   4777777788999999974

It contains a characteristic DLL sequence motif.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.64  E-value=0.19  Score=37.97  Aligned_cols=189  Identities=15%  Similarity=0.071  Sum_probs=98.0

Q ss_pred             EEECCCCceEEEeeCC-----------CeEEEEEccCCcee-eeeeeeeecCc-eeeEEeCCCCCeEEEEecC--C-ccE
Q psy8758           7 TVWSLDNKFVISASDE-----------MNLRVWKAHASEKL-GPIRKVVMSLR-SNMVSWNPMEAFVFTAANE--D-FNL   70 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d-----------~~i~i~~~~~~~~~-~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~--d-~~i   70 (198)
                      +.|.++++.|+....+           ..|+.|.+.++... ..+........ ...+..++++++++.....  + ..+
T Consensus       175 ~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v  254 (414)
T PF02897_consen  175 VSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEV  254 (414)
T ss_dssp             EEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEE
T ss_pred             EEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeE
Confidence            8999998876555422           24677777665432 12222112222 5678899999998875433  3 458


Q ss_pred             EEEeccCC---CC---cccc-----------ccCceEEEe---cCCCcEEEEEccCCCc--ceeeecCCCcceEEEEEcc
Q psy8758          71 YSYDIRQL---NS---PLNV-----------HKDMTSAAA---NEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSP  128 (198)
Q Consensus        71 ~~~d~~~~---~~---~~~~-----------~~~~~~~~~---~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~sp  128 (198)
                      ++.++...   ..   .+..           +.+..++..   ...+.|...++.....  ....+..+...+.-..+..
T Consensus       255 ~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~  334 (414)
T PF02897_consen  255 YLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL  334 (414)
T ss_dssp             EEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE
T ss_pred             EEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE
Confidence            88888764   11   1111           111222222   2335676777776432  1224444544333333444


Q ss_pred             CCCEEEEee-cCC--cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEE-E-ec--CCCeEEEEecCCCcc
Q psy8758         129 TGREFVAGG-YDK--SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI-S-AS--DEMNLRVWKAHASEK  195 (198)
Q Consensus       129 ~~~~l~~~~-~d~--~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~--~dg~v~~w~~~~~~~  195 (198)
                      .+.+|+... .++  .|+++++..+...........+.|..+...+++..+. + .+  .-++++.||+.+++.
T Consensus       335 ~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~  408 (414)
T PF02897_consen  335 FKDYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL  408 (414)
T ss_dssp             ETTEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred             ECCEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence            455555543 333  6889999833333333233345567776667666433 2 22  236799999998875

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.54  E-value=0.1  Score=41.33  Aligned_cols=91  Identities=16%  Similarity=0.296  Sum_probs=57.7

Q ss_pred             CcEEEEEccCCCcceeee-cCCCcceEEEEEc--cCCCEEEEeecCCcEEEEEcCC---------CceeeEE-eccCc-c
Q psy8758          97 FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYS--PTGREFVAGGYDKSLRLYLAHQ---------GHSRDIY-HTKRM-Q  162 (198)
Q Consensus        97 ~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~s--p~~~~l~~~~~d~~v~v~d~~~---------~~~~~~~-~~~~~-~  162 (198)
                      ..+.+||.+. +...... -...+.|.+++|.  |+|+.+++.+..+.|.+|.-..         ..++..+ ...++ .
T Consensus        51 ~~LtIWD~~~-~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h  129 (631)
T PF12234_consen   51 SELTIWDTRS-GVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPH  129 (631)
T ss_pred             CEEEEEEcCC-cEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCC
Confidence            3566677665 2221111 1346789999984  6788888888899999985531         1122222 12233 5


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +|.+..|.++|.+++.+  .+.+.|++-
T Consensus       130 ~Igds~Wl~~G~LvV~s--GNqlfv~dk  155 (631)
T PF12234_consen  130 PIGDSIWLKDGTLVVGS--GNQLFVFDK  155 (631)
T ss_pred             CccceeEecCCeEEEEe--CCEEEEECC
Confidence            89999999999877654  456777764

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.44  E-value=0.29  Score=38.20  Aligned_cols=117  Identities=13%  Similarity=0.236  Sum_probs=67.4

Q ss_pred             cceeEEEECCCCc----eEEEeeCCCeEEEEEccCC-----ceeeeeeeeee--cCc--eeeEEeCCCCCeEEEEecCCc
Q psy8758           2 QHVTHTVWSLDNK----FVISASDEMNLRVWKAHAS-----EKLGPIRKVVM--SLR--SNMVSWNPMEAFVFTAANEDF   68 (198)
Q Consensus         2 ~~v~~~~~s~~~~----~l~~~~~d~~i~i~~~~~~-----~~~~~~~~~~~--~~~--v~~~~~~~~~~~~~~~~~~d~   68 (198)
                      +.|..+.|.|-+.    .+++..-...|.+|.+...     +.+.. +.-..  .-+  ...+.|+|....+.+-...|-
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~s-QtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dv  135 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMS-QTCEIREPFPVLPQGCVWHPKKAILTVLTARDV  135 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceee-eeeeccCCcccCCCcccccCCCceEEEEecCce
Confidence            4689999999532    4455556678999998521     11111 11111  111  256789998887766543443


Q ss_pred             cEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEc
Q psy8758          69 NLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLA  147 (198)
Q Consensus        69 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~  147 (198)
                      . .+++++..                             ...++.--...+.|.|.+|.+||+.|+++-. .=.-++||-
T Consensus       136 S-V~~sV~~d-----------------------------~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~  185 (671)
T PF15390_consen  136 S-VLPSVHCD-----------------------------SSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDS  185 (671)
T ss_pred             e-EeeeeeeC-----------------------------CceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence            2 23444322                             2233222235677999999999997766533 334677876


Q ss_pred             CC
Q psy8758         148 HQ  149 (198)
Q Consensus       148 ~~  149 (198)
                      ..
T Consensus       186 ~q  187 (671)
T PF15390_consen  186 AQ  187 (671)
T ss_pred             ch
Confidence            54

>KOG2247|consensus

Probab=96.39  E-value=0.00048  Score=51.37  Aligned_cols=137  Identities=11%  Similarity=0.171  Sum_probs=90.7

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH   85 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~   85 (198)
                      ...|-|++.-++.++.+..+..||-. ++......   .++....++|..++..+++.+...+.+.+||+.+..      
T Consensus        39 ~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n---~tg~aldm~wDkegdvlavlAek~~piylwd~n~ey------  108 (615)
T KOG2247|consen   39 IHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN---PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY------  108 (615)
T ss_pred             eeeEecCCCceehhhhhhHHHhhhhh-cceecccC---CchhHhhhhhccccchhhhhhhcCCCeeechhhhhh------
Confidence            35677777768878777788888853 33222222   234456778888887777666667778888876421      


Q ss_pred             cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEE
Q psy8758          86 KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT  165 (198)
Q Consensus        86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~  165 (198)
                                            .+.+..--.+...  -+.|++....++.+...+.+.+++..+.+..... ..|...+.
T Consensus       109 ----------------------tqqLE~gg~~s~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~-Gkh~RRgt  163 (615)
T KOG2247|consen  109 ----------------------TQQLESGGTSSKS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM-GKHQRRGT  163 (615)
T ss_pred             ----------------------HHHHhccCcchHH--HHhhccCCccccccccccceEEEeccchhhhhhh-ccccccee
Confidence                                  1111111112222  2678998889999988999999998887665554 34888999


Q ss_pred             EEEEcCCCCEEE
Q psy8758         166 HTVWSLDNKFVI  177 (198)
Q Consensus       166 ~~~~s~~~~~l~  177 (198)
                      +++|.+.+..+.
T Consensus       164 q~av~lEd~vil  175 (615)
T KOG2247|consen  164 QIAVTLEDYVIL  175 (615)
T ss_pred             EEEecccceeee
Confidence            999999876544

>PHA02713 hypothetical protein; Provisional

Probab=96.37  E-value=0.18  Score=39.79  Aligned_cols=69  Identities=10%  Similarity=0.064  Sum_probs=40.0

Q ss_pred             cCceEEEecCC------CcEEEEEccC-C-CcceeeecCCCcceEEEEEccCCCEEEEeecCC--cEEEEEcCCCceeeE
Q psy8758          86 KDMTSAAANED------FNLYSYDIRQ-L-NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--SLRLYLAHQGHSRDI  155 (198)
Q Consensus        86 ~~~~~~~~~~~------~~i~~~d~~~-~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--~v~v~d~~~~~~~~~  155 (198)
                      .+.+++.|+.+      ..+..||..+ . -..+..++..........+  +++..++|+.++  .+..||..+.+....
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~  540 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI  540 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence            34556666653      2356788775 1 2223333322222333333  678889999888  778888887766554


Q ss_pred             E
Q psy8758         156 Y  156 (198)
Q Consensus       156 ~  156 (198)
                      .
T Consensus       541 ~  541 (557)
T PHA02713        541 C  541 (557)
T ss_pred             h
Confidence            4

>PRK10115 protease 2; Provisional

Probab=96.29  E-value=0.47  Score=38.54  Aligned_cols=71  Identities=10%  Similarity=0.165  Sum_probs=46.6

Q ss_pred             eeEEEECCCCceEEEeeC-----CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEE
Q psy8758           4 VTHTVWSLDNKFVISASD-----EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSY   73 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~   73 (198)
                      +..+.|||+|++|+.+.+     ...+++.|+.+++.+.....   ... ..++|.++++.++.+...+     ..++.+
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~---~~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h  204 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD---NVE-PSFVWANDSWTFYYVRKHPVTLLPYQVWRH  204 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc---Ccc-eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence            567889999998886532     23578888877753211111   111 4589999999888765432     357777


Q ss_pred             eccCC
Q psy8758          74 DIRQL   78 (198)
Q Consensus        74 d~~~~   78 (198)
                      ++.+.
T Consensus       205 ~lgt~  209 (686)
T PRK10115        205 TIGTP  209 (686)
T ss_pred             ECCCC
Confidence            87765

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=96.19  E-value=0.074  Score=36.44  Aligned_cols=65  Identities=9%  Similarity=0.033  Sum_probs=48.6

Q ss_pred             EccCCCEEEEeecCCcEEEEEcCCCceeeEE------ec-------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIY------HT-------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~------~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +..++.+|++-..+|.+++||+.+++....-      ..       .....|..+.++.+|.-+++-+ +|..+.|+.+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~   95 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD   95 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence            4557889999999999999999987654321      11       2446789999999998777655 5778888764

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG1897|consensus

Probab=96.10  E-value=0.66  Score=38.48  Aligned_cols=154  Identities=12%  Similarity=0.174  Sum_probs=96.7

Q ss_pred             ceeEEEECCC-CceEEEee----------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEE
Q psy8758           3 HVTHTVWSLD-NKFVISAS----------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         3 ~v~~~~~s~~-~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~   71 (198)
                      +|.++.|..| ++++++|+          ..|.|.+|.+...+.++.+......+.+.++.-- +|+.++.   -...++
T Consensus       776 Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~---In~~vr  851 (1096)
T KOG1897|consen  776 SIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAG---INQSVR  851 (1096)
T ss_pred             eeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEe---cCcEEE
Confidence            3556668777 66777764          2467888887765555555554445555555432 3444432   344555


Q ss_pred             EEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC--C
Q psy8758          72 SYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH--Q  149 (198)
Q Consensus        72 ~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~--~  149 (198)
                      +|+...                              .+.++.-..+..++..+.+.-.|..+++|..-+.+.+...+  .
T Consensus       852 Lye~t~------------------------------~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~e  901 (1096)
T KOG1897|consen  852 LYEWTT------------------------------ERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDE  901 (1096)
T ss_pred             EEEccc------------------------------cceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccC
Confidence            555543                              34555556677788889888899999999887776665554  4


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      |........-+..+++++.+-.+..++ .+..+|.+.+-..+
T Consensus       902 g~f~evArD~~p~Wmtaveil~~d~yl-gae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  902 GNFEEVARDYNPNWMTAVEILDDDTYL-GAENSGNLFTVRKD  942 (1096)
T ss_pred             CceEEeehhhCccceeeEEEecCceEE-eecccccEEEEEec
Confidence            445554444556788888876555444 45567777776554

>KOG2377|consensus

Probab=95.98  E-value=0.37  Score=36.52  Aligned_cols=72  Identities=10%  Similarity=0.177  Sum_probs=48.0

Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE---eccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY---HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      ..++|.++.||+|.+.+|+--.+++|.+++....+.....   .......|....|+.+ .-+|..+..| +-+|.+
T Consensus        65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v  139 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQV  139 (657)
T ss_pred             CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEE
Confidence            4568999999999999999999999999998543332222   1222345888888865 4444443333 445544

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=95.96  E-value=0.75  Score=37.95  Aligned_cols=171  Identities=11%  Similarity=0.170  Sum_probs=98.0

Q ss_pred             cceeEEEEC---C----CCceEEEeeCCCeEEEEEccCC------c------eeeeeeeee----ecCceeeEEeCCCCC
Q psy8758           2 QHVTHTVWS---L----DNKFVISASDEMNLRVWKAHAS------E------KLGPIRKVV----MSLRSNMVSWNPMEA   58 (198)
Q Consensus         2 ~~v~~~~~s---~----~~~~l~~~~~d~~i~i~~~~~~------~------~~~~~~~~~----~~~~v~~~~~~~~~~   58 (198)
                      .+|..|.|+   .    ..++|++- ....+.|+...-.      .      ....+....    ...+...++|+|...
T Consensus        80 ~PI~qI~fa~~~~~~~~~~~~l~Vr-t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~~~  158 (765)
T PF10214_consen   80 SPIKQIKFATLSESFDEKSRWLAVR-TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPWDQ  158 (765)
T ss_pred             CCeeEEEecccccccCCcCcEEEEE-cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccCcc
Confidence            478888888   2    22355554 4456777772111      1      011222211    234567899999665


Q ss_pred             eEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec
Q psy8758          59 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        59 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      .-++.-+..|...+|++....   ........+.....|.| +.|...           .+....+.|.++...|+.++.
T Consensus       159 ~q~AiVD~~G~Wsvw~i~~~~---~~~~~~~~~~~~~~gsi-~~d~~e-----------~s~w~rI~W~~~~~~lLv~~r  223 (765)
T PF10214_consen  159 RQFAIVDEKGNWSVWDIKGRP---KRKSSNLRLSRNISGSI-IFDPEE-----------LSNWKRILWVSDSNRLLVCNR  223 (765)
T ss_pred             ceEEEEeccCcEEEEEecccc---ccCCcceeeccCCCccc-cCCCcc-----------cCcceeeEecCCCCEEEEEcC
Confidence            555555789999999992111   11112223333333444 222221           144567889988888888765


Q ss_pred             CCcEEEEEcCCCceee-EEeccCcccEEEEEEcCC--CC-EEEEecCCCeEEEEecCC
Q psy8758         139 DKSLRLYLAHQGHSRD-IYHTKRMQHVTHTVWSLD--NK-FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~-~~~~~~~~~v~~~~~s~~--~~-~l~~~~~dg~v~~w~~~~  192 (198)
                       ..+.++|+++..... .........|..+.-+|+  +. +++|.   ..|...++.+
T Consensus       224 -~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs---~eiiw~~~~~  277 (765)
T PF10214_consen  224 -SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTS---KEIIWLDVKS  277 (765)
T ss_pred             -CceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEec---CeEEEEEccC
Confidence             458999999876644 333344568888888887  23 33332   4566666655

These proteins are found in fungi.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.75  E-value=0.51  Score=36.35  Aligned_cols=135  Identities=14%  Similarity=0.203  Sum_probs=79.2

Q ss_pred             CCCCCeEEEEecCCccEEEEeccCCCCc--ccccc----------------CceEEEecCCCcEEEEEccCCCcceeeec
Q psy8758          54 NPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVHK----------------DMTSAAANEDFNLYSYDIRQLNSPLNVHK  115 (198)
Q Consensus        54 ~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~~----------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~  115 (198)
                      ..+...++..|.....++-.|++.++..  +..+.                +.--+.|-.+..|.-.|.+-.+..+....
T Consensus       476 ~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddvvVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e  555 (776)
T COG5167         476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDVVVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE  555 (776)
T ss_pred             cCCcceEEecCCCcccceeeecccceeeeEeecCCcceeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence            3455666666655566666666544321  11111                12245566666677777765443333222


Q ss_pred             CCCcceEEEEEcc----CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         116 DMTSAVTSVDYSP----TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       116 ~~~~~i~~~~~sp----~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                       .+...+-=.||.    ...++|.++..|.|++||--.......+ ++-+..|..+..+.+|+++++.|. ..+.+-|++
T Consensus       556 -sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtal-P~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         556 -SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTAL-PGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             -ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcC-cccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence             222233333333    3458999999999999996543333333 455578999999999998776654 567777764

>KOG2377|consensus

Probab=95.66  E-value=0.6  Score=35.47  Aligned_cols=105  Identities=6%  Similarity=-0.011  Sum_probs=62.9

Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS  123 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  123 (198)
                      ..++|.++.|++|++.+++ --.+.+|.+.+.......                          ......-+.....|..
T Consensus        65 d~G~I~SIkFSlDnkilAV-QR~~~~v~f~nf~~d~~~--------------------------l~~~~~ck~k~~~IlG  117 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAV-QRTSKTVDFCNFIPDNSQ--------------------------LEYTQECKTKNANILG  117 (657)
T ss_pred             CCCceeEEEeccCcceEEE-EecCceEEEEecCCCchh--------------------------hHHHHHhccCcceeEE
Confidence            4568999999999888776 456778877776422100                          0111112233445888


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEE
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI  177 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  177 (198)
                      ..|+.+ .-+|.-...| +.+|.....+........|...|.-..|.++.+.++
T Consensus       118 F~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~L  169 (657)
T KOG2377|consen  118 FCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVIL  169 (657)
T ss_pred             EEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEe
Confidence            889866 4455544444 666666543322222245667788888999887543

>KOG4460|consensus

Probab=95.62  E-value=0.41  Score=36.92  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=51.8

Q ss_pred             cceEEEEEccCCCEEEEeecCCcEEEEEcC---------CCceeeEE----------eccCcccEEEEEEcCCC---CEE
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAH---------QGHSRDIY----------HTKRMQHVTHTVWSLDN---KFV  176 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~---------~~~~~~~~----------~~~~~~~v~~~~~s~~~---~~l  176 (198)
                      -.|..+..+|.|..++..+.+|.+.++=.+         .++.....          .....-.+..++|+|+.   ..|
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL  183 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL  183 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence            357788899999999999989866555322         23222111          11112357889999986   466


Q ss_pred             EEecCCCeEEEEecCCCcc
Q psy8758         177 ISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       177 ~~~~~dg~v~~w~~~~~~~  195 (198)
                      ..-+.|+.+++||+.....
T Consensus       184 ~iL~sdnviRiy~lS~~te  202 (741)
T KOG4460|consen  184 VLLTSDNVIRIYSLSEPTE  202 (741)
T ss_pred             EEEecCcEEEEEecCCcch
Confidence            6677899999999876443

>PRK10115 protease 2; Provisional

Probab=95.61  E-value=0.99  Score=36.75  Aligned_cols=113  Identities=6%  Similarity=0.022  Sum_probs=61.6

Q ss_pred             eeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcce-eeecCCCcceEEEEE
Q psy8758          48 SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPL-NVHKDMTSAVTSVDY  126 (198)
Q Consensus        48 v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~  126 (198)
                      +..+.|+|++++++.+.+.+|.                         +...+++.|+.+ +..+ ..+..-   -..++|
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~-------------------------E~~~l~v~d~~t-g~~l~~~i~~~---~~~~~w  179 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSR-------------------------RQYGIRFRNLET-GNWYPELLDNV---EPSFVW  179 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCc-------------------------EEEEEEEEECCC-CCCCCccccCc---ceEEEE
Confidence            4567788888888776443332                         223344444443 3322 222211   145899


Q ss_pred             ccCCCEEEEeecC------CcEEEEEcCCC--ceeeEEeccCcccEE-EEEEcCCCCEEEEec---CCCeEEEEec
Q psy8758         127 SPTGREFVAGGYD------KSLRLYLAHQG--HSRDIYHTKRMQHVT-HTVWSLDNKFVISAS---DEMNLRVWKA  190 (198)
Q Consensus       127 sp~~~~l~~~~~d------~~v~v~d~~~~--~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~---~dg~v~~w~~  190 (198)
                      ++|++.|+....+      ..|+.+++.++  +....+. ....... ....+.++++++..+   .++.+.+++.
T Consensus       180 ~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~-e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~  254 (686)
T PRK10115        180 ANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYE-EKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA  254 (686)
T ss_pred             eeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEe-eCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence            9999866655432      36888888887  3333332 2222232 333444888665432   3467888884

>KOG1900|consensus

Probab=95.48  E-value=0.5  Score=40.26  Aligned_cols=146  Identities=13%  Similarity=0.137  Sum_probs=84.0

Q ss_pred             eCCCeEEEEEccCCceeeeeeeeeecCceeeEE--------eCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEE
Q psy8758          20 SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVS--------WNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSA   91 (198)
Q Consensus        20 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~   91 (198)
                      +-|+.+.+|+.+++.....+....|  .|..+.        |.|.=+++++.+ .-..|.++-+.-.....         
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~sh--tIl~V~LvkPkpgvFv~~IqhlLvva-T~~ei~ilgV~~~~~~~---------  163 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSH--TILKVGLVKPKPGVFVPEIQHLLVVA-TPVEIVILGVSFDEFTG---------  163 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhh--hheeeeeecCCCCcchhhhheeEEec-ccceEEEEEEEeccccC---------
Confidence            4578899999998665555554432  233332        444445555543 44556665543211000         


Q ss_pred             EecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC----CC---c-e-----------
Q psy8758          92 AANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH----QG---H-S-----------  152 (198)
Q Consensus        92 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~----~~---~-~-----------  152 (198)
                            ...++      .....+......|+++....+|+.+.+|-.+ .  +|.+.    .+   + +           
T Consensus       164 ------~~~~f------~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg-~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls  228 (1311)
T KOG1900|consen  164 ------ELSIF------NTSFKISVDGVSVNCITYTENGRIFFAGRDG-N--LYELVYQAEDGWFGSRCRKICLTKSVLS  228 (1311)
T ss_pred             ------ccccc------ccceeeecCCceEEEEEeccCCcEEEeecCC-C--EEEEEEeccCchhhcccccccCchhHHH
Confidence                  00000      0002222335568899988889887776544 3  33321    10   0 0           


Q ss_pred             -----eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         153 -----RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       153 -----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                           +..+...+..+|..++.....+.+.+-+..|+|.+|++..
T Consensus       229 ~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  229 SLVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             HhhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence                 0111124567999999998888999999999999999976

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=95.44  E-value=1.2  Score=36.43  Aligned_cols=91  Identities=14%  Similarity=0.210  Sum_probs=55.1

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCC---CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN---SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS  123 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  123 (198)
                      .|..+..+|+|.+++.+|.  ..|.+..+...-   ..+.....        .-.++.+.+..   .+. .......|..
T Consensus        86 ~v~~i~~n~~g~~lal~G~--~~v~V~~LP~r~g~~~~~~~g~~--------~i~Crt~~v~~---~~~-~~~~~~~i~q  151 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGP--RGVVVLELPRRWGKNGEFEDGKK--------EINCRTVPVDE---RFF-TSNSSLEIKQ  151 (717)
T ss_pred             eEEEEEECCCCCEEEEEcC--CcEEEEEeccccCccccccCCCc--------ceeEEEEEech---hhc-cCCCCceEEE
Confidence            5778899999999998763  456666654320   01111000        01122222221   111 1234567899


Q ss_pred             EEEccC---CCEEEEeecCCcEEEEEcCCCc
Q psy8758         124 VDYSPT---GREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus       124 ~~~sp~---~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                      +.|+|.   +..|+.-..|+++|+||+....
T Consensus       152 v~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  152 VRWHPWSESDSHLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             EEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence            999997   4688888899999999997643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=95.41  E-value=0.14  Score=40.36  Aligned_cols=69  Identities=17%  Similarity=0.216  Sum_probs=42.8

Q ss_pred             cCCCEEEEeecCCcEEEEEcCC----CceeeEE-ecc--------------------CcccEEEEEEcC----CCCEEEE
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQ----GHSRDIY-HTK--------------------RMQHVTHTVWSL----DNKFVIS  178 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~----~~~~~~~-~~~--------------------~~~~v~~~~~s~----~~~~l~~  178 (198)
                      ++...++.+..||.+.......    +...... ...                    .......++.++    +..+|++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4666788888899888887764    1111111 010                    113456666766    6679999


Q ss_pred             ecCCCeEEEEecCCCccc
Q psy8758         179 ASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       179 ~~~dg~v~~w~~~~~~~~  196 (198)
                      .+.|+.+++||+.+++++
T Consensus       236 l~~D~~LRiW~l~t~~~~  253 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCL  253 (547)
T ss_dssp             EETTSEEEEEETTTTCEE
T ss_pred             EeCCCeEEEEECCCCeEE
Confidence            999999999999999885

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=95.41  E-value=0.5  Score=32.05  Aligned_cols=82  Identities=12%  Similarity=0.092  Sum_probs=47.2

Q ss_pred             CcceeeecCCCcceEEEEEccCCCEEEEeecC------CcEEEE---EcC--CCce---------------------eeE
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD------KSLRLY---LAH--QGHS---------------------RDI  155 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d------~~v~v~---d~~--~~~~---------------------~~~  155 (198)
                      .+++..+..- +.|..+.++..|+++++-=.+      ..+|+|   ...  ...+                     +..
T Consensus        50 ~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qlei  128 (215)
T PF14761_consen   50 CPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEI  128 (215)
T ss_pred             CceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEEEcccccccCCCCccccceEE
Confidence            3555566543 778899999999999985321      256665   111  1111                     111


Q ss_pred             EeccCcccEEEEEEcCC-CCEEEEecCCCeEEEEecCC
Q psy8758         156 YHTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ++.+-...+.+++..|- |+++ .|+ ++.+.+|.+..
T Consensus       129 iElPl~~~p~ciaCC~~tG~Ll-Vg~-~~~l~lf~l~~  164 (215)
T PF14761_consen  129 IELPLSEPPLCIACCPVTGNLL-VGC-GNKLVLFTLKY  164 (215)
T ss_pred             EEecCCCCCCEEEecCCCCCEE-EEc-CCEEEEEEEEE
Confidence            11222346677777774 5544 444 56788887753

>KOG1916|consensus

Probab=95.40  E-value=0.033  Score=45.22  Aligned_cols=70  Identities=14%  Similarity=0.132  Sum_probs=39.8

Q ss_pred             EccCCCEEEEeecCCcEEEEEcC-----CCceeeEEeccCc-ccEEEEEEcCC-------C--CEEEEec-CCCeEEEEe
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAH-----QGHSRDIYHTKRM-QHVTHTVWSLD-------N--KFVISAS-DEMNLRVWK  189 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~-----~~~~~~~~~~~~~-~~v~~~~~s~~-------~--~~l~~~~-~dg~v~~w~  189 (198)
                      +||||+.++....||.+++|.+.     ...+.... ..|. .+-.+.-|+.+       +  .++++++ .+..+++|.
T Consensus       243 lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhew-kphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~  321 (1283)
T KOG1916|consen  243 LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEW-KPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWA  321 (1283)
T ss_pred             eCCCCcEEEEeecCCccceeeeeeeccccHhhhhcc-CCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEee
Confidence            79999999999999998888664     22333333 2333 22222223322       1  2344444 345688887


Q ss_pred             cCCCccc
Q psy8758         190 AHASEKL  196 (198)
Q Consensus       190 ~~~~~~~  196 (198)
                      ....+++
T Consensus       322 ~a~w~Cl  328 (1283)
T KOG1916|consen  322 EAPWQCL  328 (1283)
T ss_pred             ccchhhh
Confidence            6655543

>KOG2395|consensus

Probab=95.36  E-value=0.29  Score=37.68  Aligned_cols=101  Identities=14%  Similarity=0.179  Sum_probs=67.3

Q ss_pred             CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC--EE-----EEeecCCcEEEEEcCCCce-eeEEec
Q psy8758          87 DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR--EF-----VAGGYDKSLRLYLAHQGHS-RDIYHT  158 (198)
Q Consensus        87 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~--~l-----~~~~~d~~v~v~d~~~~~~-~~~~~~  158 (198)
                      +.++..+.....++-.|++. ++.+....-+.. |+-+.+.|+.+  .|     +.|-.|+.|.-||++-... ......
T Consensus       346 nlil~~~~~~~~l~klDIE~-GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q  423 (644)
T KOG2395|consen  346 NLILMDGGEQDKLYKLDIER-GKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQ  423 (644)
T ss_pred             ceEeeCCCCcCcceeeeccc-ceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeee
Confidence            34566777778888899988 788888876655 77788888754  22     3455688899999984322 111222


Q ss_pred             cC----cccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         159 KR----MQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       159 ~~----~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +|    ...-.+.+-..+| +++.|+.+|.|++||-
T Consensus       424 ~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr  458 (644)
T KOG2395|consen  424 SKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR  458 (644)
T ss_pred             ccccccccccceeeecCCc-eEEEeecCCcEEeehh
Confidence            22    1233444444444 7888999999999986

>KOG4499|consensus

Probab=95.33  E-value=0.58  Score=32.31  Aligned_cols=77  Identities=5%  Similarity=0.066  Sum_probs=48.7

Q ss_pred             ceEEEEEccCCCEEE-EeecCCcEEEEE--cCCCce-----eeEEecc---CcccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         120 AVTSVDYSPTGREFV-AGGYDKSLRLYL--AHQGHS-----RDIYHTK---RMQHVTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       120 ~i~~~~~sp~~~~l~-~~~~d~~v~v~d--~~~~~~-----~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      --+.++|+.+.+.+. +-+.+-+|.-||  ..+|..     +..++..   .....-.++...+|++.++.-..++|...
T Consensus       159 IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~  238 (310)
T KOG4499|consen  159 ISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKV  238 (310)
T ss_pred             CCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence            346788888777554 445566776676  555433     2222110   11123345667788888877778999999


Q ss_pred             ecCCCccc
Q psy8758         189 KAHASEKL  196 (198)
Q Consensus       189 ~~~~~~~~  196 (198)
                      |..+|+.+
T Consensus       239 dp~tGK~L  246 (310)
T KOG4499|consen  239 DPTTGKIL  246 (310)
T ss_pred             CCCCCcEE
Confidence            99999876

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=95.32  E-value=0.71  Score=33.19  Aligned_cols=190  Identities=11%  Similarity=0.090  Sum_probs=98.5

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccC------Ccee-eeeeeee---ecCceeeEEeCCCCCe-----------EEEE
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHA------SEKL-GPIRKVV---MSLRSNMVSWNPMEAF-----------VFTA   63 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~------~~~~-~~~~~~~---~~~~v~~~~~~~~~~~-----------~~~~   63 (198)
                      ..++++|.+.+-++....+...+||...      .+.+ ..+....   .....+.+.|+.....           .+..
T Consensus        26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif  105 (336)
T TIGR03118        26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLF  105 (336)
T ss_pred             ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEE
Confidence            5789999998877777788899999861      1111 1111000   1234567777643322           1222


Q ss_pred             ecCCccEEEEeccCCCC-------ccccc-c---------------CceEEEecCCCcEEEEEccCCCcceeeecCCCcc
Q psy8758          64 ANEDFNLYSYDIRQLNS-------PLNVH-K---------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA  120 (198)
Q Consensus        64 ~~~d~~i~~~d~~~~~~-------~~~~~-~---------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~  120 (198)
                      +++||+|.-|...-...       .+... .               +.++++--.+++|.++|-.-  .++..-....++
T Consensus       106 ~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f--~~~~~~g~F~DP  183 (336)
T TIGR03118       106 VTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSF--RPPPLPGSFIDP  183 (336)
T ss_pred             EeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcc--ccccCCCCccCC
Confidence            46899999998532111       11111 0               11222223445566665332  111100000011


Q ss_pred             ----------e---------EEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC------CCCE
Q psy8758         121 ----------V---------TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL------DNKF  175 (198)
Q Consensus       121 ----------i---------~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~  175 (198)
                                |         +-..-.++.+.=+.+..-|.|-+||+.-.-.......+.-...+.|+..|      .|.+
T Consensus       184 ~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~l  263 (336)
T TIGR03118       184 ALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVASSGRLNAPWGLAIAPESFGSLSGAL  263 (336)
T ss_pred             CCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEeccCCcccCCceeeeChhhhCCCCCCe
Confidence                      1         11111122222222333478999998654333333344445677888866      4667


Q ss_pred             EEEecCCCeEEEEecCCCccc
Q psy8758         176 VISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+---.||+|..||..+|+.+
T Consensus       264 LVGNFGDG~InaFD~~sG~~~  284 (336)
T TIGR03118       264 LVGNFGDGTINAYDPQSGAQL  284 (336)
T ss_pred             EEeecCCceeEEecCCCCcee
Confidence            776667999999999988754

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.30  E-value=0.48  Score=38.21  Aligned_cols=73  Identities=8%  Similarity=0.103  Sum_probs=51.9

Q ss_pred             CcceEEEEEc--cCCCEEEEeecCCcEEEEEcCCCceeeEE--eccCcccEEEEEEcCCC---C---EEEEecCCCeEEE
Q psy8758         118 TSAVTSVDYS--PTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSLDN---K---FVISASDEMNLRV  187 (198)
Q Consensus       118 ~~~i~~~~~s--p~~~~l~~~~~d~~v~v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~---~---~l~~~~~dg~v~~  187 (198)
                      ...+..++++  ...+++|+++....|.||-..........  ...+..-|.+++|-++.   .   .|++++-.|.+.+
T Consensus       163 ~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~  242 (717)
T PF08728_consen  163 GASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWT  242 (717)
T ss_pred             CCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEE
Confidence            4468899998  77889999888888888866553211111  12345678899997743   2   7778889999999


Q ss_pred             Eec
Q psy8758         188 WKA  190 (198)
Q Consensus       188 w~~  190 (198)
                      |++
T Consensus       243 ~~I  245 (717)
T PF08728_consen  243 FKI  245 (717)
T ss_pred             EEE
Confidence            888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=95.28  E-value=0.81  Score=33.62  Aligned_cols=53  Identities=8%  Similarity=0.110  Sum_probs=33.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-----eecCceeeEEeCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-----VMSLRSNMVSWNPM   56 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~   56 (198)
                      +.-..|+|.|+|+.+++ ...|.|++++ ..+.....+...     ........++++|+
T Consensus         2 ~~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    2 NNPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             SSEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             CCceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            34578999999987664 5699999999 444431222221     12345678899984

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PHA02790 Kelch-like protein; Provisional

Probab=95.26  E-value=1.1  Score=34.89  Aligned_cols=131  Identities=8%  Similarity=-0.017  Sum_probs=63.4

Q ss_pred             CCeEEEEecCC--ccEEEEeccCCC----Ccc---------ccccCceEEEecCCC---cEEEEEccCCCccee--eecC
Q psy8758          57 EAFVFTAANED--FNLYSYDIRQLN----SPL---------NVHKDMTSAAANEDF---NLYSYDIRQLNSPLN--VHKD  116 (198)
Q Consensus        57 ~~~~~~~~~~d--~~i~~~d~~~~~----~~~---------~~~~~~~~~~~~~~~---~i~~~d~~~~~~~~~--~~~~  116 (198)
                      +..+++.|+.+  ..+..||..+..    .++         ....+.+++.|+.++   .+..||.++ ..-..  ....
T Consensus       318 ~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~-~~W~~~~~m~~  396 (480)
T PHA02790        318 NNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNH-DQWQFGPSTYY  396 (480)
T ss_pred             CCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCC-CEEEeCCCCCC
Confidence            34555555543  356777765322    111         112334566666543   366777765 22111  1111


Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC-----CeEEEEecC
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAH  191 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~  191 (198)
                      ..... ++ ..-+++..+.|+   .+.+||..+.+....-...+...-.+++ .-+|+..+.|+.+     ..+..||..
T Consensus       397 ~r~~~-~~-~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r~~~~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~  470 (480)
T PHA02790        397 PHYKS-CA-LVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPRDNPELI-IVDNKLLLIGGFYRGSYIDTIEVYNNR  470 (480)
T ss_pred             ccccc-eE-EEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCccccEEE-EECCEEEEECCcCCCcccceEEEEECC
Confidence            11111 12 223566666664   4778998876654332111111111222 2367777777654     468888887


Q ss_pred             CCc
Q psy8758         192 ASE  194 (198)
Q Consensus       192 ~~~  194 (198)
                      +.+
T Consensus       471 ~~~  473 (480)
T PHA02790        471 TYS  473 (480)
T ss_pred             CCe
Confidence            654

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.20  E-value=0.23  Score=34.04  Aligned_cols=67  Identities=15%  Similarity=0.178  Sum_probs=43.2

Q ss_pred             EECCCCceEEEeeCCCeEEEEEccCCceeeee------eee------eecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           8 VWSLDNKFVISASDEMNLRVWKAHASEKLGPI------RKV------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~------~~~------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      .+..+++++++-+.+|.+++||+.+++....-      -..      .....|..+.++.+|.-+++.  .+|..+.|+.
T Consensus        17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l--sng~~y~y~~   94 (219)
T PF07569_consen   17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL--SNGDSYSYSP   94 (219)
T ss_pred             EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE--eCCCEEEecc
Confidence            34567889999999999999999877643221      100      123456667777666665553  3456677665


Q ss_pred             c
Q psy8758          76 R   76 (198)
Q Consensus        76 ~   76 (198)
                      .
T Consensus        95 ~   95 (219)
T PF07569_consen   95 D   95 (219)
T ss_pred             c
Confidence            4

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG2280|consensus

Probab=95.19  E-value=1.4  Score=35.69  Aligned_cols=56  Identities=11%  Similarity=0.115  Sum_probs=39.8

Q ss_pred             CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCC
Q psy8758         118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN  173 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~  173 (198)
                      ...+..+..||+.++|+-=...|.+.+-+....+....+..+...+...++|..+.
T Consensus       216 ~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgnd  271 (829)
T KOG2280|consen  216 NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGND  271 (829)
T ss_pred             CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCchHhceeecCC
Confidence            45678899999999999999999999998887666555432222333466665543

>KOG3630|consensus

Probab=95.16  E-value=0.4  Score=40.38  Aligned_cols=70  Identities=14%  Similarity=0.044  Sum_probs=49.8

Q ss_pred             eEEEEEccCCC-EEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         121 VTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       121 i~~~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ..++.|+|.-. ..+....|+.|++..+........- ..-....++++|+|.|+.++.|-..|++.-|...
T Consensus       158 ~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~  228 (1405)
T KOG3630|consen  158 QLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS  228 (1405)
T ss_pred             cccccccCCccchhhhhccccchhhhhhhhhhhhhcc-cCcccceeeEEeccccceeeEecCCCeEEEeecc
Confidence            45778888643 3456667888988877654332221 1233678999999999999999999998877653

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=95.14  E-value=1.2  Score=36.70  Aligned_cols=65  Identities=12%  Similarity=0.095  Sum_probs=41.7

Q ss_pred             CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccE-------------EEEEEcC--CCCEEEEec----------CCCe
Q psy8758         130 GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV-------------THTVWSL--DNKFVISAS----------DEMN  184 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v-------------~~~~~s~--~~~~l~~~~----------~dg~  184 (198)
                      +..++.++.|+.+.-.|.++|+....+...  +.+             ..+.-+|  .+..++.++          .+|.
T Consensus       260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~--G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~  337 (764)
T TIGR03074       260 ARRIILPTSDARLIALDADTGKLCEDFGNN--GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGV  337 (764)
T ss_pred             CCEEEEecCCCeEEEEECCCCCEEEEecCC--CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcE
Confidence            447778888999999999999988665211  111             0111122  123444443          2688


Q ss_pred             EEEEecCCCccc
Q psy8758         185 LRVWKAHASEKL  196 (198)
Q Consensus       185 v~~w~~~~~~~~  196 (198)
                      |+-+|++||+++
T Consensus       338 I~A~Da~TGkl~  349 (764)
T TIGR03074       338 IRAFDVNTGALV  349 (764)
T ss_pred             EEEEECCCCcEe
Confidence            999999999875

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=95.05  E-value=1  Score=33.58  Aligned_cols=161  Identities=17%  Similarity=0.159  Sum_probs=68.7

Q ss_pred             EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC------CccEEEEeccCCC-CccccccCceEE---Eec
Q psy8758          25 LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE------DFNLYSYDIRQLN-SPLNVHKDMTSA---AAN   94 (198)
Q Consensus        25 i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------d~~i~~~d~~~~~-~~~~~~~~~~~~---~~~   94 (198)
                      |.--|+.+++....+   .....+..+.|+|..+.++.-|-+      |..|++.+..... .++..+.....+   ...
T Consensus       170 i~~idl~tG~~~~v~---~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~  246 (386)
T PF14583_consen  170 IFTIDLKTGERKVVF---EDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWV  246 (386)
T ss_dssp             EEEEETTT--EEEEE---EESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-
T ss_pred             EEEEECCCCceeEEE---ecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCccccccccc
Confidence            444455565532222   235667889999988777766522      3345555543221 122222221111   112


Q ss_pred             CCCcEEE---------------EEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC----------------cEE
Q psy8758          95 EDFNLYS---------------YDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK----------------SLR  143 (198)
Q Consensus        95 ~~~~i~~---------------~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~----------------~v~  143 (198)
                      .||....               +|+.+ .+... +.. ..+..-.--++||++++-=+.|.                -|+
T Consensus       247 ~DG~~i~y~~~~~~~~~~~i~~~d~~t-~~~~~-~~~-~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~  323 (386)
T PF14583_consen  247 PDGSTIWYDSYTPGGQDFWIAGYDPDT-GERRR-LME-MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIY  323 (386)
T ss_dssp             TTSS-EEEEEEETTT--EEEEEE-TTT---EEE-EEE-E-SEEEEEE-TTSSEEEEEE-------------------EEE
T ss_pred             CCCCEEEEEeecCCCCceEEEeeCCCC-CCceE-EEe-CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEE
Confidence            3444444               44443 11111 111 11222334478888776433332                466


Q ss_pred             EEEcCCCceeeEEe--------ccCc-ccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758         144 LYLAHQGHSRDIYH--------TKRM-QHVTHTVWSLDNKFVI-SASDEMNLRVWKAH  191 (198)
Q Consensus       144 v~d~~~~~~~~~~~--------~~~~-~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~  191 (198)
                      ++++..+.......        .++. ..=..+.|+|||++++ ++...|...||-++
T Consensus       324 ~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~  381 (386)
T PF14583_consen  324 LFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE  381 (386)
T ss_dssp             EEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred             EeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence            78887766543321        1111 1235689999999765 55567877777554

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=94.99  E-value=0.16  Score=23.98  Aligned_cols=31  Identities=19%  Similarity=0.311  Sum_probs=19.6

Q ss_pred             cCCCcceEEEEEccCCCEEEEeec-C--CcEEEE
Q psy8758         115 KDMTSAVTSVDYSPTGREFVAGGY-D--KSLRLY  145 (198)
Q Consensus       115 ~~~~~~i~~~~~sp~~~~l~~~~~-d--~~v~v~  145 (198)
                      ......-....|||||+.|+.++. +  |...||
T Consensus         5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            334556778999999998876654 4  444444

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=94.94  E-value=0.31  Score=36.80  Aligned_cols=41  Identities=2%  Similarity=-0.092  Sum_probs=34.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV   42 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~   42 (198)
                      +.+.++..+|++++.|+...-|.|.++|+..+..++..+..
T Consensus       308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY  348 (415)
T PF14655_consen  308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY  348 (415)
T ss_pred             ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC
Confidence            35788999999999999888899999999988766666554

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=94.83  E-value=0.19  Score=24.02  Aligned_cols=40  Identities=5%  Similarity=-0.035  Sum_probs=27.2

Q ss_pred             cCCCEEEEee-cCCcEEEEEcCCCceeeEEeccCcccEEEEEE
Q psy8758         128 PTGREFVAGG-YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW  169 (198)
Q Consensus       128 p~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~  169 (198)
                      |++++|.++. .++.|.++|..+++.+..+..+  .....++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg--~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG--GYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC--CCCceEEe
Confidence            5777666554 5789999999888877776443  33444444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=94.82  E-value=1  Score=32.54  Aligned_cols=64  Identities=9%  Similarity=0.148  Sum_probs=35.9

Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcC-CCceeeE--Eec-cCcccEEEEEEcCCCCEEEEecC
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-QGHSRDI--YHT-KRMQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~-~~~~~~~--~~~-~~~~~v~~~~~s~~~~~l~~~~~  181 (198)
                      ....|..|.|+|++.+.+.+ ..|.|++=+.. ..+.-..  ... ...-.+..++|.++++..++++.
T Consensus       185 ~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~  252 (302)
T PF14870_consen  185 SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS  252 (302)
T ss_dssp             SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST
T ss_pred             ccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCC
Confidence            45789999999998866654 67778777622 2211111  101 12235899999999888876654

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.76  E-value=1.2  Score=32.80  Aligned_cols=25  Identities=8%  Similarity=0.224  Sum_probs=20.0

Q ss_pred             eeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758          48 SNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus        48 v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      .+.++|.|+++.+++  ...|.|++++
T Consensus         4 P~~~a~~pdG~l~v~--e~~G~i~~~~   28 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA--ERSGRIWVVD   28 (331)
T ss_dssp             EEEEEEETTSCEEEE--ETTTEEEEEE
T ss_pred             ceEEEEeCCCcEEEE--eCCceEEEEe
Confidence            478999999877654  4689999888

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=94.64  E-value=0.38  Score=36.28  Aligned_cols=61  Identities=15%  Similarity=0.203  Sum_probs=35.3

Q ss_pred             eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeec-----------------CceeeEEeCCCCCeEEEEe
Q psy8758           4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMS-----------------LRSNMVSWNPMEAFVFTAA   64 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~   64 (198)
                      |+++.+|.|.++|+... -+|.++.||+.+...++........                 +...-+..|.||++++++.
T Consensus       314 itDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn  392 (461)
T PF05694_consen  314 ITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN  392 (461)
T ss_dssp             ---EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred             eEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence            68899999999998776 5899999999877655554432212                 2235677788888887764

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=94.45  E-value=0.66  Score=30.53  Aligned_cols=30  Identities=13%  Similarity=0.292  Sum_probs=24.9

Q ss_pred             cEEEEEEcCCC------CEEEEecCCCeEEEEecCC
Q psy8758         163 HVTHTVWSLDN------KFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       163 ~v~~~~~s~~~------~~l~~~~~dg~v~~w~~~~  192 (198)
                      .+.+++|||.|      .+|++...++.|.+|....
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            78999999954      3788889999999998764

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG1916|consensus

Probab=94.32  E-value=0.04  Score=44.78  Aligned_cols=93  Identities=17%  Similarity=0.192  Sum_probs=57.7

Q ss_pred             CcEEEEEccCC-Ccc-----eeeecCCCcceEEEEEcc---CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEE
Q psy8758          97 FNLYSYDIRQL-NSP-----LNVHKDMTSAVTSVDYSP---TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT  167 (198)
Q Consensus        97 ~~i~~~d~~~~-~~~-----~~~~~~~~~~i~~~~~sp---~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~  167 (198)
                      |.+.+||+... ++.     +.........+.-+.|.|   +.-++..+-.++.+++...++... ..+ .+|..++..+
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~-rsHs~~~~d~  230 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLF-RSHSQRVTDM  230 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHH-HhcCCCcccH
Confidence            56777886531 111     122233334456666766   445667777788888887765433 222 2354443333


Q ss_pred             E-----------EcCCCCEEEEecCCCeEEEEecC
Q psy8758         168 V-----------WSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       168 ~-----------~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +           .||||..+++++.||.++.|.+.
T Consensus       231 a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  231 AFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             HHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            2           68999999999999999988764

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=94.23  E-value=1.8  Score=32.86  Aligned_cols=131  Identities=13%  Similarity=0.062  Sum_probs=76.7

Q ss_pred             CceEEEeeCCCeEEEEEccCCce--eeeeeeeeecCceeeEEeC---C--CCCeEEEEecCCccEEEEeccCCCCc----
Q psy8758          13 NKFVISASDEMNLRVWKAHASEK--LGPIRKVVMSLRSNMVSWN---P--MEAFVFTAANEDFNLYSYDIRQLNSP----   81 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~---~--~~~~~~~~~~~d~~i~~~d~~~~~~~----   81 (198)
                      ...|++|+..|.++||+......  ...+.......+|..+..-   +  +...|++  =.-..+.+|.+......    
T Consensus        37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV--LhP~kl~vY~v~~~~g~~~~g  114 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV--LHPRKLSVYSVSLVDGTVEHG  114 (418)
T ss_pred             ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE--ecCCEEEEEEEEecCCCcccC
Confidence            35899999999999999854331  1223333345666666543   2  2223333  24566777776321110    


Q ss_pred             ------------------------ccccc-CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          82 ------------------------LNVHK-DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        82 ------------------------~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                                              +.+.. ...+.+-+-||.+.+++-+.  .....+-...--...+.|.|.-..++++
T Consensus       115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~--~~f~~~lp~~llPgPl~Y~~~tDsfvt~  192 (418)
T PF14727_consen  115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES--FAFSRFLPDFLLPGPLCYCPRTDSFVTA  192 (418)
T ss_pred             cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc--EEEEEEcCCCCCCcCeEEeecCCEEEEe
Confidence                                    11111 24578889999999999775  2222222222223457788888888888


Q ss_pred             ecCCcEEEEEc
Q psy8758         137 GYDKSLRLYLA  147 (198)
Q Consensus       137 ~~d~~v~v~d~  147 (198)
                      +.+..+.-|..
T Consensus       193 sss~~l~~Yky  203 (418)
T PF14727_consen  193 SSSWTLECYKY  203 (418)
T ss_pred             cCceeEEEecH
Confidence            87777777754

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=94.13  E-value=1.5  Score=31.46  Aligned_cols=140  Identities=16%  Similarity=0.057  Sum_probs=84.9

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV   84 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~   84 (198)
                      .++.++  +++...+..+.-++|.|+.+...+..+......+--.+  |.-.|++..++ ..+.-+.+.|+.....+.-.
T Consensus        90 ~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyayg--v~vsGn~aYVa-dlddgfLivdvsdpssP~la  164 (370)
T COG5276          90 ADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYG--VYVSGNYAYVA-DLDDGFLIVDVSDPSSPQLA  164 (370)
T ss_pred             heeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEE--EEecCCEEEEe-eccCcEEEEECCCCCCceee
Confidence            345554  44666677777899999998877666655432222233  44457777765 45677788888766543211


Q ss_pred             -----c---------cCceEEEecCCCcEEEEEccCCCcceeeecCCCc-ceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          85 -----H---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS-AVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        85 -----~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                           .         .+.....+..|+-+.+-|+.++..|...-....+ .+.++..+++-.+++...  --+.+-|...
T Consensus       165 grya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~  242 (370)
T COG5276         165 GRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSG  242 (370)
T ss_pred             eeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceEEEecCC
Confidence                 1         1123444457888999999887666554433333 677888887655555443  3355555554


Q ss_pred             Cc
Q psy8758         150 GH  151 (198)
Q Consensus       150 ~~  151 (198)
                      .+
T Consensus       243 ~s  244 (370)
T COG5276         243 PS  244 (370)
T ss_pred             CC
Confidence            44

>PHA03098 kelch-like protein; Provisional

Probab=94.12  E-value=2.3  Score=33.51  Aligned_cols=65  Identities=11%  Similarity=0.088  Sum_probs=34.2

Q ss_pred             CCCEEEEeecC------CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC--------CeEEEEecCCCc
Q psy8758         129 TGREFVAGGYD------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE--------MNLRVWKAHASE  194 (198)
Q Consensus       129 ~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------g~v~~w~~~~~~  194 (198)
                      +++..+.|+.+      +.+..||..+.+......... ..-...+...+++.++.|+.+        ..+.+||..+.+
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPI-SHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCc-cccCceEEEECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            56777777732      468899988765533221110 011111222356666666542        237888887643

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=94.04  E-value=0.29  Score=23.06  Aligned_cols=28  Identities=14%  Similarity=0.390  Sum_probs=20.0

Q ss_pred             CceeeEEeCCCCCeEEEEecCC--ccEEEE
Q psy8758          46 LRSNMVSWNPMEAFVFTAANED--FNLYSY   73 (198)
Q Consensus        46 ~~v~~~~~~~~~~~~~~~~~~d--~~i~~~   73 (198)
                      ..-....|+|||+.++.++..+  |.-.||
T Consensus         9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            3456789999999999987666  655554

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>KOG4460|consensus

Probab=94.01  E-value=2.3  Score=33.14  Aligned_cols=95  Identities=11%  Similarity=0.055  Sum_probs=52.7

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCc-EEEEEccCCCcceeeecCCCcceEEEE
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFN-LYSYDIRQLNSPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~i~~~~  125 (198)
                      .|..+..++.|..++.+| .+|.+.++=.+.-...          +--.||+ +........+..+.... ..-.+...+
T Consensus       105 eV~~vl~s~~GS~VaL~G-~~Gi~vMeLp~rwG~~----------s~~eDgk~~v~CRt~~i~~~~ftss-~~ltl~Qa~  172 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIG-IKGLMVMELPKRWGKN----------SEFEDGKSTVNCRTTPVAERFFTSS-TSLTLKQAA  172 (741)
T ss_pred             EEEEEEecCCCceEEEec-CCeeEEEEchhhcCcc----------ceecCCCceEEEEeecccceeeccC-Cceeeeecc
Confidence            456777889999988876 5665544432211000          1112331 11111111112222222 223467889


Q ss_pred             EccCC---CEEEEeecCCcEEEEEcCCCcee
Q psy8758         126 YSPTG---REFVAGGYDKSLRLYLAHQGHSR  153 (198)
Q Consensus       126 ~sp~~---~~l~~~~~d~~v~v~d~~~~~~~  153 (198)
                      |+|+.   ..|..-+.|+.+|+||+.+.+.+
T Consensus       173 WHP~S~~D~hL~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  173 WHPSSILDPHLVLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             ccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence            99985   57778888999999999865444

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=93.92  E-value=0.84  Score=36.04  Aligned_cols=37  Identities=16%  Similarity=0.205  Sum_probs=28.0

Q ss_pred             ceEEEEEcc----CCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758         120 AVTSVDYSP----TGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       120 ~i~~~~~sp----~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      ....++.++    +..++++.+.|+.+|+||+.+++++...
T Consensus       216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred             ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            455666766    6779999999999999999999985543

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PRK13684 Ycf48-like protein; Provisional

Probab=93.79  E-value=2  Score=31.67  Aligned_cols=155  Identities=16%  Similarity=0.151  Sum_probs=81.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEE-EEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRV-WKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.+.++.+.|++.+++++. .|.+.. ++ ..++.-..+.. .....+..+.+.|+++.+++ + ..|.+.+-.....  
T Consensus       173 g~~~~i~~~~~g~~v~~g~-~G~i~~s~~-~gg~tW~~~~~-~~~~~l~~i~~~~~g~~~~v-g-~~G~~~~~s~d~G--  245 (334)
T PRK13684        173 GVVRNLRRSPDGKYVAVSS-RGNFYSTWE-PGQTAWTPHQR-NSSRRLQSMGFQPDGNLWML-A-RGGQIRFNDPDDL--  245 (334)
T ss_pred             ceEEEEEECCCCeEEEEeC-CceEEEEcC-CCCCeEEEeeC-CCcccceeeeEcCCCCEEEE-e-cCCEEEEccCCCC--
Confidence            3578888999887776654 454432 22 12222222222 23456788889998876654 3 4565542211110  


Q ss_pred             ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe--c
Q psy8758          81 PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH--T  158 (198)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~--~  158 (198)
                                       .  -|..     +..........+..+.+.|+++.++++ .+|.+. .....++.-....  .
T Consensus       246 -----------------~--sW~~-----~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~  299 (334)
T PRK13684        246 -----------------E--SWSK-----PIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGE  299 (334)
T ss_pred             -----------------C--cccc-----ccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCC
Confidence                             0  0110     000000012356788999988765554 566554 4444444433221  1


Q ss_pred             cCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         159 KRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       159 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      .-......+.|..+++.+++ +..|.|..|+-
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~-G~~G~il~~~~  330 (334)
T PRK13684        300 EVPSNFYKIVFLDPEKGFVL-GQRGVLLRYVG  330 (334)
T ss_pred             CCCcceEEEEEeCCCceEEE-CCCceEEEecC
Confidence            11235778888877776665 46788877764

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=93.79  E-value=3.1  Score=33.88  Aligned_cols=32  Identities=9%  Similarity=0.183  Sum_probs=24.8

Q ss_pred             CCcceEEEEEccCC-----C-EEEEeecCCcEEEEEcC
Q psy8758         117 MTSAVTSVDYSPTG-----R-EFVAGGYDKSLRLYLAH  148 (198)
Q Consensus       117 ~~~~i~~~~~sp~~-----~-~l~~~~~d~~v~v~d~~  148 (198)
                      +...|.+++|-++.     . ++++++-.|.+.+|++.
T Consensus       209 ~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~  246 (717)
T PF08728_consen  209 HSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK  246 (717)
T ss_pred             cccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence            56678889987653     2 77888889999998883

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=93.71  E-value=2.5  Score=32.56  Aligned_cols=55  Identities=9%  Similarity=0.050  Sum_probs=35.2

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee--eeeeee---eecCceeeEEeCCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL--GPIRKV---VMSLRSNMVSWNPME   57 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~~---~~~~~v~~~~~~~~~   57 (198)
                      .-..|+|.|||+.|++--..|.|++++..++...  ..+...   ........++++|+-
T Consensus        31 ~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        31 KPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            3468999999987776654699999876544321  111111   124567899999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=93.61  E-value=1.3  Score=29.09  Aligned_cols=31  Identities=29%  Similarity=0.319  Sum_probs=25.5

Q ss_pred             cceEEEEEccCC------CEEEEeecCCcEEEEEcCC
Q psy8758         119 SAVTSVDYSPTG------REFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus       119 ~~i~~~~~sp~~------~~l~~~~~d~~v~v~d~~~  149 (198)
                      ..+..++|||.|      -.|++...++.|.+|....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            378899999964      2788889999999998764

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=93.58  E-value=0.8  Score=26.45  Aligned_cols=40  Identities=18%  Similarity=0.101  Sum_probs=28.3

Q ss_pred             cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         138 YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .+|.+.-||..+++.......-  ...+.++.+||+.+++.+
T Consensus        35 ~~GRll~ydp~t~~~~vl~~~L--~fpNGVals~d~~~vlv~   74 (89)
T PF03088_consen   35 PTGRLLRYDPSTKETTVLLDGL--YFPNGVALSPDESFVLVA   74 (89)
T ss_dssp             --EEEEEEETTTTEEEEEEEEE--SSEEEEEE-TTSSEEEEE
T ss_pred             CCcCEEEEECCCCeEEEehhCC--CccCeEEEcCCCCEEEEE
Confidence            4578999999998875554222  467899999999977655

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=93.41  E-value=2.6  Score=31.89  Aligned_cols=150  Identities=14%  Similarity=0.122  Sum_probs=78.2

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      ..+..+++|.+++.+.....++-||  .++.. ..+.. .....+..+.|.+++..++++  .+|.+..-+-...     
T Consensus       242 ~~v~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~-~~~~~l~~v~~~~dg~l~l~g--~~G~l~~S~d~G~-----  311 (398)
T PLN00033        242 STVNRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNR-ASARRIQNMGWRADGGLWLLT--RGGGLYVSKGTGL-----  311 (398)
T ss_pred             eeEEEcCCCCEEEEECCccEEEecC--CCCcceEEecC-CCccceeeeeEcCCCCEEEEe--CCceEEEecCCCC-----
Confidence            3455667777776664433233333  23221 22222 234567888999888877653  5555443221110     


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe--cc
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH--TK  159 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~--~~  159 (198)
                                       -|..    ........  ....+..+.|.+++..+++| ..|.+..- ...++.-....  ..
T Consensus       312 -----------------~~~~----~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s-~D~G~tW~~~~~~~~  368 (398)
T PLN00033        312 -----------------TEED----FDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS-TDGGKSWKRDKGADN  368 (398)
T ss_pred             -----------------cccc----cceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe-CCCCcceeEccccCC
Confidence                             0000    01121111  22358889999887766555 56755544 34444322221  12


Q ss_pred             CcccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         160 RMQHVTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       160 ~~~~v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      -....+.+.|.++++-+++| .+|.|.-|
T Consensus       369 ~~~~ly~v~f~~~~~g~~~G-~~G~il~~  396 (398)
T PLN00033        369 IAANLYSVKFFDDKKGFVLG-NDGVLLRY  396 (398)
T ss_pred             CCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence            23568899998887776655 57877554

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=92.62  E-value=3.3  Score=30.94  Aligned_cols=60  Identities=17%  Similarity=0.174  Sum_probs=32.4

Q ss_pred             cceEEEEEccCCCEEEEeecCCcEEEEEcCCC-----ceeeEE---ecc---CcccEEEEEEcCCCCEEEEec
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG-----HSRDIY---HTK---RMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~-----~~~~~~---~~~---~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      .....|++.++| ++++ ......++.|....     +....+   ...   +......++|.|||.+.++-+
T Consensus        72 ~~p~Gi~~~~~G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        72 SMVTGLAVAVGG-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             CCccceeEecCC-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            345789999988 4444 34433333344321     211111   111   124577899999998766544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=92.20  E-value=0.67  Score=21.99  Aligned_cols=31  Identities=10%  Similarity=0.100  Sum_probs=21.8

Q ss_pred             CCCceEEEee-CCCeEEEEEccCCceeeeeee
Q psy8758          11 LDNKFVISAS-DEMNLRVWKAHASEKLGPIRK   41 (198)
Q Consensus        11 ~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~   41 (198)
                      |++++++++. .++.|.++|..+++....+..
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v   32 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV   32 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence            5777776655 578999999977765555443

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=92.10  E-value=2.7  Score=28.68  Aligned_cols=165  Identities=12%  Similarity=0.155  Sum_probs=81.5

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-----cEEEEe---cc-CCCCcccc
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-----NLYSYD---IR-QLNSPLNV   84 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-----~i~~~d---~~-~~~~~~~~   84 (198)
                      ..|..+.....|.+|++.... ...+..+..-+.|..+.++..|+++++--.+..     .+++|-   .. ....+.. 
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~-~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~-  106 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEE-CPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVR-  106 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCC-CceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEE-
Confidence            444444566789999998332 223333333477899999999999988642221     345442   22 1111111 


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce-e---eEEe--
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS-R---DIYH--  157 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~-~---~~~~--  157 (198)
                          .-++|..-..-.   .+.....+..++ +-..++.+++..|-..-|+.|+ ++.+.+|.+..... .   ..+.  
T Consensus       107 ----vRiaG~~v~~~~---~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~~~~~~~~~lDFe  178 (215)
T PF14761_consen  107 ----VRIAGHRVTPSF---NESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQTIQSEKFSFLDFE  178 (215)
T ss_pred             ----EEEcccccccCC---CCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEEEecccccEEech
Confidence                011110000000   000011222222 2345678898888533344443 46788888765433 1   1110  


Q ss_pred             ----ccC-cccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         158 ----TKR-MQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       158 ----~~~-~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                          ..| +..+..+++.  +.++|..+ +-.+++..+.
T Consensus       179 ~~l~~~~~~~~p~~v~ic--~~yiA~~s-~~ev~Vlkl~  214 (215)
T PF14761_consen  179 RSLIDHIDNFKPTQVAIC--EGYIAVMS-DLEVLVLKLE  214 (215)
T ss_pred             hhhhheecCceEEEEEEE--eeEEEEec-CCEEEEEEEe
Confidence                011 1234555554  55777665 5567777653

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=91.75  E-value=4.9  Score=30.92  Aligned_cols=143  Identities=11%  Similarity=0.087  Sum_probs=82.7

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCC----Ccccc----------------ccCceEEEecCCCcEEEE-Ecc
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN----SPLNV----------------HKDMTSAAANEDFNLYSY-DIR  105 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~----~~~~~----------------~~~~~~~~~~~~~~i~~~-d~~  105 (198)
                      .+..+-..|+++.++.-.  ..++.++++.+..    +....                ..+..+..+..||.+.-| |.+
T Consensus       222 ~v~qllL~Pdg~~LYv~~--g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr  299 (733)
T COG4590         222 DVSQLLLTPDGKTLYVRT--GSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVR  299 (733)
T ss_pred             chHhhEECCCCCEEEEec--CCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeee
Confidence            456677889999888753  3566666654321    11111                112347788888888655 666


Q ss_pred             CCCcceee----ecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC
Q psy8758         106 QLNSPLNV----HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       106 ~~~~~~~~----~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  181 (198)
                      ..+.+...    ++-...++..+.=..+.+-+++-...|++.++.....+.+...  .--..+.-+++||.+.++++- .
T Consensus       300 ~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~--~~~~~~~~~~~Sp~~~~Ll~e-~  376 (733)
T COG4590         300 RDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE--RAYQAPQLVAMSPNQAYLLSE-D  376 (733)
T ss_pred             cCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehh--hhhcCcceeeeCcccchheee-c
Confidence            53433221    1111223333222223446777777888888776555443322  111356678999999988754 4


Q ss_pred             CCeEEEEecCCCc
Q psy8758         182 EMNLRVWKAHASE  194 (198)
Q Consensus       182 dg~v~~w~~~~~~  194 (198)
                      .|.++++.+++..
T Consensus       377 ~gki~~~~l~Nr~  389 (733)
T COG4590         377 QGKIRLAQLENRN  389 (733)
T ss_pred             CCceEEEEecCCC
Confidence            5789999887643

>KOG1983|consensus

Probab=91.15  E-value=9.1  Score=32.91  Aligned_cols=27  Identities=0%  Similarity=0.128  Sum_probs=23.7

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEcc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAH   31 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~   31 (198)
                      ..++|+|...++|.++..|.+++|...
T Consensus        39 ~~~afD~~q~llai~t~tg~i~~yg~~   65 (993)
T KOG1983|consen   39 SALAFDPTQGLLAIGTRTGAIKIYGQP   65 (993)
T ss_pred             cceeeccccceEEEEEecccEEEeccc
Confidence            467899999999999999999998754

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=90.99  E-value=6.4  Score=30.82  Aligned_cols=130  Identities=15%  Similarity=0.139  Sum_probs=78.2

Q ss_pred             CCCceEEE-eeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCC--------CeEEEEecCCccEEEEeccCCCCc
Q psy8758          11 LDNKFVIS-ASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPME--------AFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus        11 ~~~~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+.++|+. |.....++-.|++-|+.+.....+   ..+ -+.|.|..        +.|+  |-.+..|.-.|.+-....
T Consensus       477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~---ddv-vVqy~p~~kf~qmt~eqtlv--GlS~~svFrIDPR~~gNK  550 (776)
T COG5167         477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLK---DDV-VVQYNPYFKFQQMTDEQTLV--GLSDYSVFRIDPRARGNK  550 (776)
T ss_pred             CCcceEEecCCCcccceeeecccceeeeEeecC---Ccc-eeecCCchhHHhcCccceEE--eecccceEEecccccCCc
Confidence            34444433 444455666677777655555432   223 45666643        3343  334556666665422111


Q ss_pred             -----------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          82 -----------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        82 -----------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                                       .......++++++.-|-|++||.-. ......+++....|..+..+.+|+++++.+ ...+.+
T Consensus       551 i~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL  628 (776)
T COG5167         551 IKVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLL  628 (776)
T ss_pred             eeeeeehhccccccccccccccCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEee-cceEEE
Confidence                             1112335799999999999999764 344455667778899999999999776654 355667


Q ss_pred             EEcC
Q psy8758         145 YLAH  148 (198)
Q Consensus       145 ~d~~  148 (198)
                      -|++
T Consensus       629 ~d~~  632 (776)
T COG5167         629 TDVP  632 (776)
T ss_pred             Eecc
Confidence            6665

>smart00564 PQQ beta-propeller repeat

Probab=90.96  E-value=0.55  Score=20.98  Aligned_cols=22  Identities=27%  Similarity=0.206  Sum_probs=18.3

Q ss_pred             EEEEecCCCeEEEEecCCCccc
Q psy8758         175 FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       175 ~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .++.++.+|.+..+|.++|+.+
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~   29 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEIL   29 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEE
Confidence            5666788999999999998865

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=90.78  E-value=2.3  Score=32.54  Aligned_cols=145  Identities=13%  Similarity=0.046  Sum_probs=82.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeeeeeec---Ccee-eEEeCCCCCeEEEEecCCccEEEE-ecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRKVVMS---LRSN-MVSWNPMEAFVFTAANEDFNLYSY-DIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~---~~v~-~~~~~~~~~~~~~~~~~d~~i~~~-d~~   76 (198)
                      .|..+-..|||+.++.-+. ..+.++++.+.... +++......   ..|. .+..-..+..+++ ++.||-+.-| |++
T Consensus       222 ~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv-~~~dG~vsQWFdvr  299 (733)
T COG4590         222 DVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLV-VHEDGLVSQWFDVR  299 (733)
T ss_pred             chHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEE-EcCCCceeeeeeee
Confidence            4566778999998877655 57888888654311 111111001   1111 1111223344444 4678877665 554


Q ss_pred             CCCCccc------------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec
Q psy8758          77 QLNSPLN------------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        77 ~~~~~~~------------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      ....+.-                  ..+...+++-+..|++..+...+ .+++. ++..-..+.-+++||.+.++++-. 
T Consensus       300 ~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~-~~~lL-~~~~~~~~~~~~~Sp~~~~Ll~e~-  376 (733)
T COG4590         300 RDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTS-EKLLL-FERAYQAPQLVAMSPNQAYLLSED-  376 (733)
T ss_pred             cCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeeccc-Cccee-hhhhhcCcceeeeCcccchheeec-
Confidence            3322211                  11223477777888888777654 23322 222233567789999999888764 


Q ss_pred             CCcEEEEEcCCCce
Q psy8758         139 DKSLRLYLAHQGHS  152 (198)
Q Consensus       139 d~~v~v~d~~~~~~  152 (198)
                      .|.++++.+++..+
T Consensus       377 ~gki~~~~l~Nr~P  390 (733)
T COG4590         377 QGKIRLAQLENRNP  390 (733)
T ss_pred             CCceEEEEecCCCC
Confidence            46799998877544

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=90.13  E-value=5.1  Score=28.35  Aligned_cols=182  Identities=10%  Similarity=0.114  Sum_probs=88.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee------------eeeeecCceeeEE--eCCCCCeEEEEecCCc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI------------RKVVMSLRSNMVS--WNPMEAFVFTAANEDF   68 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~------------~~~~~~~~v~~~~--~~~~~~~~~~~~~~d~   68 (198)
                      +|..+...|+-+.+++-+ |+.++++++..-.....-            ........+...+  -.+.+...++++ ...
T Consensus        37 ~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk  114 (275)
T PF00780_consen   37 SITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKK  114 (275)
T ss_pred             eEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEE-ECC
Confidence            477888888777666654 589999998754322210            0111222333333  112333333333 345


Q ss_pred             cEEEEeccCCCCcc-------cccc--------CceEEEecCCCcEEEEEccCCCcceeeecC------------CCcce
Q psy8758          69 NLYSYDIRQLNSPL-------NVHK--------DMTSAAANEDFNLYSYDIRQLNSPLNVHKD------------MTSAV  121 (198)
Q Consensus        69 ~i~~~d~~~~~~~~-------~~~~--------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~~i  121 (198)
                      .|.+|........+       ....        +..++.+. .....+.|+.+ +.....+..            ...++
T Consensus       115 ~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~~~i~v~~-~~~f~~idl~~-~~~~~l~~~~~~~~~~~~~~~~~~~~  192 (275)
T PF00780_consen  115 KILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLGNKICVGT-SKGFYLIDLNT-GSPSELLDPSDSSSSFKSRNSSSKPL  192 (275)
T ss_pred             EEEEEEEECCcccccceeEEEEcCCCcEEEEEeCCEEEEEe-CCceEEEecCC-CCceEEeCccCCcchhhhcccCCCce
Confidence            77777765432111       1111        12233333 44467778775 333222211            11233


Q ss_pred             EEEEEccCCCEEEEeecCCcEEEEEcCCCceee--EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         122 TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD--IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       122 ~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ..+.. +++.+|++-  |..-.+.|. .|+...  .+.-  ...+.++++.  ..+|+.... +.|.||++.+++++.
T Consensus       193 ~~~~~-~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~W--~~~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ  261 (275)
T PF00780_consen  193 GIFQL-SDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQW--SSAPQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQ  261 (275)
T ss_pred             EEEEe-CCceEEEEe--cceEEEEcC-CCCcCcccEEEc--CCchhEEEEE--CCEEEEECC-CEEEEEECcCCcEEE
Confidence            33333 345666543  333333343 333322  2212  2345556663  347776654 569999999998753

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=89.81  E-value=2.6  Score=24.40  Aligned_cols=43  Identities=21%  Similarity=0.217  Sum_probs=27.9

Q ss_pred             eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758          20 SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus        20 ~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      ..+|.+.-||..+++....+..+   ...+.++.+|++..++++-.
T Consensus        34 ~~~GRll~ydp~t~~~~vl~~~L---~fpNGVals~d~~~vlv~Et   76 (89)
T PF03088_consen   34 RPTGRLLRYDPSTKETTVLLDGL---YFPNGVALSPDESFVLVAET   76 (89)
T ss_dssp             ---EEEEEEETTTTEEEEEEEEE---SSEEEEEE-TTSSEEEEEEG
T ss_pred             CCCcCEEEEECCCCeEEEehhCC---CccCeEEEcCCCCEEEEEec
Confidence            34578888998887644444443   23578999999999888643

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function

Probab=89.79  E-value=8.6  Score=30.44  Aligned_cols=59  Identities=14%  Similarity=0.232  Sum_probs=35.0

Q ss_pred             eEEEEEccCCCEEEEeecCCc------------EE-----------EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEE
Q psy8758         121 VTSVDYSPTGREFVAGGYDKS------------LR-----------LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI  177 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d~~------------v~-----------v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  177 (198)
                      .-.|+|+|+|++++.-...+.            +.           ..+...++....+.......++.++|+||++.|.
T Consensus       438 PDNL~~d~~G~LwI~eD~~~~~~~l~g~t~~G~~~~~~~~~G~~~~~~~~~~g~~~rf~~~P~gaE~tG~~fspDg~tlF  517 (524)
T PF05787_consen  438 PDNLAFDPDGNLWIQEDGGGSNNNLPGVTPDGEVYDFARNDGNNVWAYDPDTGELKRFLVGPNGAEITGPCFSPDGRTLF  517 (524)
T ss_pred             CCceEECCCCCEEEEeCCCCCCcccccccccCceeeeeecccceeeeccccccceeeeccCCCCcccccceECCCCCEEE
Confidence            345788999886665433221            11           1122334444444334457899999999999876


Q ss_pred             Ee
Q psy8758         178 SA  179 (198)
Q Consensus       178 ~~  179 (198)
                      ..
T Consensus       518 vn  519 (524)
T PF05787_consen  518 VN  519 (524)
T ss_pred             EE
Confidence            53

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=89.69  E-value=7.2  Score=29.37  Aligned_cols=70  Identities=14%  Similarity=0.159  Sum_probs=44.2

Q ss_pred             ceEEEEE--cc-CCC-EEEEeecCCcEEEEEcC---CCc----eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         120 AVTSVDY--SP-TGR-EFVAGGYDKSLRLYLAH---QGH----SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       120 ~i~~~~~--sp-~~~-~l~~~~~d~~v~v~d~~---~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      .+..+++  +| +|+ +++....+|.+..|-+.   .+.    .+..+..  ...+..+.......+|+.+-++--|+-|
T Consensus       157 e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~--~sQ~EGCVVDDe~g~LYvgEE~~GIW~y  234 (381)
T PF02333_consen  157 EPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV--GSQPEGCVVDDETGRLYVGEEDVGIWRY  234 (381)
T ss_dssp             SEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE---SS-EEEEEEETTTTEEEEEETTTEEEEE
T ss_pred             cceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC--CCcceEEEEecccCCEEEecCccEEEEE
Confidence            3566665  44 455 55567778988888775   232    3344422  2578888888888888888888878777


Q ss_pred             ecC
Q psy8758         189 KAH  191 (198)
Q Consensus       189 ~~~  191 (198)
                      +.+
T Consensus       235 ~Ae  237 (381)
T PF02333_consen  235 DAE  237 (381)
T ss_dssp             ESS
T ss_pred             ecC
Confidence            765

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=89.56  E-value=5  Score=27.43  Aligned_cols=165  Identities=9%  Similarity=0.076  Sum_probs=86.1

Q ss_pred             CCceEEEeeC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc--
Q psy8758          12 DNKFVISASD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH--   85 (198)
Q Consensus        12 ~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~--   85 (198)
                      +|.++.+.+.  ...|++||+.+++......-.  ...+..-....-+..+..-.-.++.-..+|.++.+..  +...  
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~--~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~Ge  132 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLA--PDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGE  132 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecC--CccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCc
Confidence            3444554442  347899999887754333221  0111111111123333333346778888887765432  1111  


Q ss_pred             ------cCceEEEecCCCcEEEEEccCCCcce---eeecC-CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE
Q psy8758          86 ------KDMTSAAANEDFNLYSYDIRQLNSPL---NVHKD-MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI  155 (198)
Q Consensus        86 ------~~~~~~~~~~~~~i~~~d~~~~~~~~---~~~~~-~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~  155 (198)
                            .+..++.+....+++.-|.++....-   ....+ .-..++.+.|- +|...|-.-.+..|...+..+|+.+.-
T Consensus       133 GWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~w  211 (262)
T COG3823         133 GWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVAW  211 (262)
T ss_pred             ceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEEE
Confidence                  12235566666667777766521111   11111 11223444453 566666666677777778888776654


Q ss_pred             Ee-----------ccCcccEEEEEEcCCC-CEEEEe
Q psy8758         156 YH-----------TKRMQHVTHTVWSLDN-KFVISA  179 (198)
Q Consensus       156 ~~-----------~~~~~~v~~~~~s~~~-~~l~~~  179 (198)
                      +.           ..+....+.+++.|++ +++++|
T Consensus       212 idlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         212 IDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             EEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            41           2234567889999987 566666

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=89.47  E-value=5.9  Score=28.10  Aligned_cols=62  Identities=8%  Similarity=-0.022  Sum_probs=40.8

Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.....-.++...+||..+.+.+..+.-.  +.=+.++  .|++.|+.+.....++.+|.++.+..
T Consensus       101 ~l~qLTWk~~~~f~yd~~tl~~~~~~~y~--~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~  162 (264)
T PF05096_consen  101 KLYQLTWKEGTGFVYDPNTLKKIGTFPYP--GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEV  162 (264)
T ss_dssp             EEEEEESSSSEEEEEETTTTEEEEEEE-S--SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEE
T ss_pred             EEEEEEecCCeEEEEccccceEEEEEecC--CcceEEE--cCCCEEEEECCccceEEECCcccceE
Confidence            44455567899999999998887776333  4556666  46676776666788999998876654

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides

Probab=89.33  E-value=2.7  Score=24.10  Aligned_cols=50  Identities=20%  Similarity=0.248  Sum_probs=31.8

Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEEEEcCC
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQ  149 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~  149 (198)
                      -+.+..||.++    .+.....-...+.|.++|++++|..++ ..+.|++|..+.
T Consensus        35 ~~~Vvyyd~~~----~~~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~   85 (86)
T PF01731_consen   35 WGNVVYYDGKE----VKVVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRHK   85 (86)
T ss_pred             CceEEEEeCCE----eEEeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence            34556666443    222222234567899999999877665 468899987653

The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity

>PF01011 PQQ: PQQ enzyme repeat family

Probab=89.32  E-value=0.97  Score=21.20  Aligned_cols=21  Identities=19%  Similarity=0.167  Sum_probs=16.6

Q ss_pred             EEEecCCCeEEEEecCCCccc
Q psy8758         176 VISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +..++.+|.++-.|.+||+.+
T Consensus         3 v~~~~~~g~l~AlD~~TG~~~   23 (38)
T PF01011_consen    3 VYVGTPDGYLYALDAKTGKVL   23 (38)
T ss_dssp             EEEETTTSEEEEEETTTTSEE
T ss_pred             EEEeCCCCEEEEEECCCCCEE
Confidence            445588899999999988865

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=89.23  E-value=8.3  Score=29.50  Aligned_cols=134  Identities=13%  Similarity=0.075  Sum_probs=73.4

Q ss_pred             CCCCeEEEEecCCccEEEEeccCCCCc-----cc----------------cccCceEEEecCCCcEEEEEccCCC-c---
Q psy8758          55 PMEAFVFTAANEDFNLYSYDIRQLNSP-----LN----------------VHKDMTSAAANEDFNLYSYDIRQLN-S---  109 (198)
Q Consensus        55 ~~~~~~~~~~~~d~~i~~~d~~~~~~~-----~~----------------~~~~~~~~~~~~~~~i~~~d~~~~~-~---  109 (198)
                      +++...+..|+..|.+++|+.......     ++                ...+...++.-.-.++.+|.+.... .   
T Consensus        34 ~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~  113 (418)
T PF14727_consen   34 PSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEH  113 (418)
T ss_pred             CCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCccc
Confidence            444455556889999999998543211     00                0011112222333456666663211 1   


Q ss_pred             ----ceeeecCC--CcceEEEEEccC-----CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEE
Q psy8758         110 ----PLNVHKDM--TSAVTSVDYSPT-----GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVIS  178 (198)
Q Consensus       110 ----~~~~~~~~--~~~i~~~~~sp~-----~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  178 (198)
                          .+.....|  +.....+++-|-     ..++.+-+.||.+.+|+-+.-.....+ .. ---..-+.+.|....+++
T Consensus       114 g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~l-p~-~llPgPl~Y~~~tDsfvt  191 (418)
T PF14727_consen  114 GNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFL-PD-FLLPGPLCYCPRTDSFVT  191 (418)
T ss_pred             CcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEc-CC-CCCCcCeEEeecCCEEEE
Confidence                12222223  233445555443     247888899999999997764432222 11 122334678888788888


Q ss_pred             ecCCCeEEEEec
Q psy8758         179 ASDEMNLRVWKA  190 (198)
Q Consensus       179 ~~~dg~v~~w~~  190 (198)
                      ++.+..+.-|..
T Consensus       192 ~sss~~l~~Yky  203 (418)
T PF14727_consen  192 ASSSWTLECYKY  203 (418)
T ss_pred             ecCceeEEEecH
Confidence            887777777765

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=89.08  E-value=6.1  Score=33.10  Aligned_cols=79  Identities=16%  Similarity=0.059  Sum_probs=48.2

Q ss_pred             CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE-eecCC-----cEEEEEcCCCcee-eEEeccCcccEEEE
Q psy8758          95 EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYDK-----SLRLYLAHQGHSR-DIYHTKRMQHVTHT  167 (198)
Q Consensus        95 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~-~~~d~-----~v~v~d~~~~~~~-~~~~~~~~~~v~~~  167 (198)
                      ..+.|.+-|... ..+...-..+..++.+.+|||||+.++- .+.++     .|++-|+.+...- ..+ .-....|..-
T Consensus       327 ~~~~L~~~D~dG-~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl-~ve~aaiprw  404 (912)
T TIGR02171       327 VTGNLAYIDYTK-GASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKL-PVENAAIPRW  404 (912)
T ss_pred             CCCeEEEEecCC-CCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEe-ecccccccce
Confidence            335788888775 2333221446788999999999999987 44444     5888898864321 122 1223445444


Q ss_pred             EEcCCCCE
Q psy8758         168 VWSLDNKF  175 (198)
Q Consensus       168 ~~s~~~~~  175 (198)
                      ...++|..
T Consensus       405 rv~e~gdt  412 (912)
T TIGR02171       405 RVLENGDT  412 (912)
T ss_pred             EecCCCCe
Confidence            55666654

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=88.80  E-value=7.2  Score=28.22  Aligned_cols=171  Identities=14%  Similarity=0.031  Sum_probs=82.7

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc-----c---
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-----V---   84 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~-----~---   84 (198)
                      |++...+..|+-+.+-|+.....+..+........+.++..+++-.+++.   .+--+.+-|......+..     .   
T Consensus       181 Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vv---y~egvlivd~s~~ssp~~~gsyet~~p  257 (370)
T COG5276         181 GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVV---YDEGVLIVDVSGPSSPTVFGSYETSNP  257 (370)
T ss_pred             cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEE---cccceEEEecCCCCCceEeeccccCCc
Confidence            55666666888899999987776655555444446777777766554432   344455666554432211     0   


Q ss_pred             -------ccCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE
Q psy8758          85 -------HKDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI  155 (198)
Q Consensus        85 -------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~  155 (198)
                             -.+.+......+..+.+-|..++..+...-  .........+..  .+.++..+..+ ...+-+....+....
T Consensus       258 ~~~s~v~Vs~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a--y~~y~yiadkn-~g~vV~~s~~s~m~~  334 (370)
T COG5276         258 VSISTVPVSGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYIADKN-TGAVVDASPPSMMDK  334 (370)
T ss_pred             ccccceecccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEE--ecCeeEeccCC-ceEEEeCCChhhccc
Confidence                   011223334444455555555433332111  111111122222  12333333222 333333333222221


Q ss_pred             EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         156 YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      . .+....+.+.+.+-+.+.+.+...++.+.+|+.
T Consensus       335 ~-~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~  368 (370)
T COG5276         335 R-PGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEY  368 (370)
T ss_pred             c-cCcceEeeecceEEEeeEEEEeecCCCEEEEEe
Confidence            1 222233444444555667777788888888875

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=88.75  E-value=8.3  Score=28.84  Aligned_cols=106  Identities=13%  Similarity=0.039  Sum_probs=0.0

Q ss_pred             CceEEEecCCCcEEEEEccCCCcceeeecCCC--cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc-cc
Q psy8758          87 DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT--SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM-QH  163 (198)
Q Consensus        87 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~-~~  163 (198)
                      +..+..+..+|.+...|..+ ...+.......  ..+..-.+..+|+ +..++.++.++.+|.++|+..... .... ..
T Consensus        68 dg~v~~~~~~G~i~A~d~~~-g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~-~~~~~~~  144 (370)
T COG1520          68 DGTVYVGTRDGNIFALNPDT-GLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSR-NVGGSPY  144 (370)
T ss_pred             CCeEEEecCCCcEEEEeCCC-CcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEE-ecCCCeE


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.....-.++..+... .++.+.-.|..+|+.+
T Consensus       145 ~~~~~v~~~~~v~~~s-~~g~~~al~~~tG~~~  176 (370)
T COG1520         145 YASPPVVGDGTVYVGT-DDGHLYALNADTGTLK  176 (370)
T ss_pred             EecCcEEcCcEEEEec-CCCeEEEEEccCCcEE

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=88.68  E-value=4.3  Score=25.48  Aligned_cols=29  Identities=7%  Similarity=0.020  Sum_probs=21.8

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCC
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHAS   33 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~   33 (198)
                      ..-.|......|+.++..|+|.|++....
T Consensus         2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~   30 (136)
T PF14781_consen    2 AIGKFDGVHPCLACATTGGKVFIHNPHER   30 (136)
T ss_pred             eEEEeCCCceeEEEEecCCEEEEECCCcc
Confidence            34456666678888999999999987643

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=88.35  E-value=7.6  Score=27.94  Aligned_cols=91  Identities=15%  Similarity=0.178  Sum_probs=51.9

Q ss_pred             cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee------cCCcEEEEEcCCCceeeEEe---ccCcccEEEEE
Q psy8758          98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG------YDKSLRLYLAHQGHSRDIYH---TKRMQHVTHTV  168 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~------~d~~v~v~d~~~~~~~~~~~---~~~~~~v~~~~  168 (198)
                      .|++||..+ .+-...-.+-.+.|+.|.|..+.+.++.|.      ....+..||..+......-.   ..-.++|..+.
T Consensus        17 ~lC~yd~~~-~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~   95 (281)
T PF12768_consen   17 GLCLYDTDN-SQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALT   95 (281)
T ss_pred             EEEEEECCC-CEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEE
Confidence            356666554 233333334567899999986666777664      34578899998876533321   01236787777


Q ss_pred             EcC-CC-CEEEEec-CCC--eEEEEe
Q psy8758         169 WSL-DN-KFVISAS-DEM--NLRVWK  189 (198)
Q Consensus       169 ~s~-~~-~~l~~~~-~dg--~v~~w~  189 (198)
                      +.. |+ ++.+.|. .+|  .+..||
T Consensus        96 ~~~~d~~~~~~aG~~~~g~~~l~~~d  121 (281)
T PF12768_consen   96 FISNDGSNFWVAGRSANGSTFLMKYD  121 (281)
T ss_pred             eeccCCceEEEeceecCCCceEEEEc
Confidence            743 33 3444432 333  355554

>COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats [General function prediction only]

Probab=88.16  E-value=9.9  Score=29.05  Aligned_cols=167  Identities=11%  Similarity=0.169  Sum_probs=92.2

Q ss_pred             CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc---------------ccccC
Q psy8758          23 MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL---------------NVHKD   87 (198)
Q Consensus        23 ~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~---------------~~~~~   87 (198)
                      +.+.++|- .....-.+..+....+|.++.|..|--++++- -...-+.+.|+.+.+.+-               ....+
T Consensus       406 N~vYilDe-~lnvvGkltGl~~gERIYAvRf~gdv~yiVTf-rqtDPlfviDlsNPenPkvlGeLKIPGfS~YLHpigen  483 (603)
T COG4880         406 NAVYILDE-NLNVVGKLTGLAPGERIYAVRFVGDVLYIVTF-RQTDPLFVIDLSNPENPKVLGELKIPGFSEYLHPIGEN  483 (603)
T ss_pred             ceeEEEcC-CCcEEEEEeccCCCceEEEEEEeCceEEEEEE-eccCceEEEEcCCCCCCceeEEEecCCchhhccccCCC
Confidence            34566663 34455666666677889999998877777664 355678888988765431               11234


Q ss_pred             ceEEEecCCCcE--EEEEccCCCcceeeec--------CCCcceEEEEEccCCCEEE-EeecCCcEEEEEcCCCceeeEE
Q psy8758          88 MTSAAANEDFNL--YSYDIRQLNSPLNVHK--------DMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus        88 ~~~~~~~~~~~i--~~~d~~~~~~~~~~~~--------~~~~~i~~~~~sp~~~~l~-~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      .++-.|..+|.+  .++|+.....+...-.        ..-..-....|.|....+. -+...|.  ++.+..+..+.. 
T Consensus       484 ~~lGvG~~~g~vKiSLFdiSdl~~PkEv~~y~l~~~wspvf~dhHAFl~d~~~~ifFlPay~~gy--if~iedg~kl~k-  560 (603)
T COG4880         484 RLLGVGAYQGGVKISLFDISDLAAPKEVSNYTLSNAWSPVFYDHHAFLYDPEAEIFFLPAYLGGY--IFFIEDGSKLRK-  560 (603)
T ss_pred             cEEEeecccCCceEEEEeccCCCCchhhhheehhhhcchhhhccceeecCCcccEEEecccCccE--EEEEecCceeee-
Confidence            567778888765  5688876443322110        0001123345555555433 3334444  555555533222 


Q ss_pred             eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         157 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       157 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ...|...+...-|..|--+++.+   ..++++|-++.+.++
T Consensus       561 ~~e~k~na~RA~fi~dylY~vg~---~ev~~ldenswe~Vg  598 (603)
T COG4880         561 RAERKLNADRAFFIKDYLYLVGG---NEVWKLDENSWEVVG  598 (603)
T ss_pred             hhhhcccceeeEEecceEEEecc---ceeEEeccchHhhhh
Confidence            13454555555565554344332   357777776666553

>KOG2280|consensus

Probab=88.02  E-value=14  Score=30.44  Aligned_cols=35  Identities=17%  Similarity=0.157  Sum_probs=28.6

Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+..+..||+.++|+--...|.+.+-..+..+++
T Consensus       217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~l  251 (829)
T KOG2280|consen  217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQIL  251 (829)
T ss_pred             ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhh
Confidence            56788999999999998888999988877655543

>KOG1520|consensus

Probab=87.82  E-value=9.6  Score=28.51  Aligned_cols=45  Identities=18%  Similarity=0.180  Sum_probs=30.9

Q ss_pred             EEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          90 SAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                      +..+..+|.+.-||..+  +..+.+-..-.-.+.+++|||+.+++.+
T Consensus       192 ~l~g~~~GRl~~YD~~t--K~~~VLld~L~F~NGlaLS~d~sfvl~~  236 (376)
T KOG1520|consen  192 ALEGDPTGRLFRYDPST--KVTKVLLDGLYFPNGLALSPDGSFVLVA  236 (376)
T ss_pred             eecCCCccceEEecCcc--cchhhhhhcccccccccCCCCCCEEEEE
Confidence            34456788899999886  3334443333445789999999987766

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]

Probab=87.78  E-value=8.9  Score=32.24  Aligned_cols=73  Identities=11%  Similarity=0.109  Sum_probs=47.1

Q ss_pred             cceEEEEEccCCCEEEEeecCCcEEEEEcCC--------Cc-------------eee--EEeccCcccEEEEEEcCCCCE
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ--------GH-------------SRD--IYHTKRMQHVTHTVWSLDNKF  175 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~--------~~-------------~~~--~~~~~~~~~v~~~~~s~~~~~  175 (198)
                      -.|.|+.-+.+|+.+.+|..|  +.+|.+.-        .+             .+.  ....-|+..|..++.......
T Consensus       182 inV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcskiclTkS~l~sllPs~~~~~ipgetI~Ql~vDqsRg~  259 (1263)
T COG5308         182 INVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKICLTKSILSSLLPSFFSFGIPGETIKQLAVDQSRGL  259 (1263)
T ss_pred             ceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhccCCcHHHHHhhcccccccCCcccchhheeecccccc
Confidence            457788877789988888777  55665531        00             001  111234567888888877777


Q ss_pred             EEEecCCCeEEEEecCCC
Q psy8758         176 VISASDEMNLRVWKAHAS  193 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~~  193 (198)
                      |.+-+.-..|+-|.+...
T Consensus       260 ly~Lr~kS~Vray~itkn  277 (1263)
T COG5308         260 LYVLRKKSAVRAYSITKN  277 (1263)
T ss_pred             eeeecccceeeeEeeecc
Confidence            777777777887776543

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=87.70  E-value=9.2  Score=28.14  Aligned_cols=57  Identities=14%  Similarity=0.099  Sum_probs=36.9

Q ss_pred             EEEECCCCceEEEeeCC------CeEEEEEccCCceeeee-------------eeeeecCceeeEEeCCCCCeEEEE
Q psy8758           6 HTVWSLDNKFVISASDE------MNLRVWKAHASEKLGPI-------------RKVVMSLRSNMVSWNPMEAFVFTA   63 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d------~~i~i~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~~~~   63 (198)
                      ++++.++|.++++.-.+      ..|..++.. ++....+             .....+...-+++++|+++.++++
T Consensus        89 gi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~  164 (326)
T PF13449_consen   89 GIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA  164 (326)
T ss_pred             HeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence            57777788877776556      677777765 5443333             112234556789999999976665

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=87.68  E-value=7.7  Score=27.24  Aligned_cols=75  Identities=11%  Similarity=0.165  Sum_probs=41.9

Q ss_pred             cceEEEEEccCCCEEEEeecCC-cEEEEEcCCC--ceeeE-Eec-----cCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDK-SLRLYLAHQG--HSRDI-YHT-----KRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~-~v~v~d~~~~--~~~~~-~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      .+-.+...-|||+.|+.|+... +..+|.-...  ..... +..     .....--.+-..|+|++++.+..+.  .|||
T Consensus       118 RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d  195 (243)
T PF07250_consen  118 RWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYD  195 (243)
T ss_pred             CccccceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEe
Confidence            3444555668999999988764 3455554221  11111 100     0011223455689999998887654  5668


Q ss_pred             cCCCcc
Q psy8758         190 AHASEK  195 (198)
Q Consensus       190 ~~~~~~  195 (198)
                      ..+.+.
T Consensus       196 ~~~n~v  201 (243)
T PF07250_consen  196 YKTNTV  201 (243)
T ss_pred             CCCCeE
Confidence            777654

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=87.65  E-value=15  Score=30.61  Aligned_cols=68  Identities=10%  Similarity=-0.009  Sum_probs=48.5

Q ss_pred             cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE----e--------------ccCcccEEEEEEcCCCCEEEEec
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY----H--------------TKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~----~--------------~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      ..|.++....-+.+++..-.||+|.++|-.+-+.+...    .              ......+..++|||.+.-++.-.
T Consensus       260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~  339 (753)
T PF11635_consen  260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID  339 (753)
T ss_pred             CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence            45777777777788999999999999998875433222    0              01112445688999999888888


Q ss_pred             CCCeEE
Q psy8758         181 DEMNLR  186 (198)
Q Consensus       181 ~dg~v~  186 (198)
                      .+|.+.
T Consensus       340 ~~~~~~  345 (753)
T PF11635_consen  340 EDGKTK  345 (753)
T ss_pred             cCCCce
Confidence            888855

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=87.65  E-value=11  Score=31.73  Aligned_cols=54  Identities=9%  Similarity=0.014  Sum_probs=35.4

Q ss_pred             CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-----cEEEEeccCC
Q psy8758          23 MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-----NLYSYDIRQL   78 (198)
Q Consensus        23 ~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-----~i~~~d~~~~   78 (198)
                      +.|.+-|..... .+.+. .....++.+..|||||+.++.+.+..+     .|++-++++.
T Consensus       329 ~~L~~~D~dG~n-~~~ve-~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~  387 (912)
T TIGR02171       329 GNLAYIDYTKGA-SRAVE-IEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS  387 (912)
T ss_pred             CeEEEEecCCCC-ceEEE-ecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence            477787875443 33331 234677889999999999998333433     3777777653

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=87.46  E-value=8  Score=27.17  Aligned_cols=33  Identities=15%  Similarity=0.170  Sum_probs=23.7

Q ss_pred             EEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758         122 TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       122 ~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      ..+.+.|+|+.++.+..+.  .|||..+.+.+..+
T Consensus       173 P~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~l  205 (243)
T PF07250_consen  173 PFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTL  205 (243)
T ss_pred             ceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeC
Confidence            3577889999999887654  56788877654443

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>COG1770 PtrB Protease II [Amino acid transport and metabolism]

Probab=87.24  E-value=14  Score=29.87  Aligned_cols=185  Identities=14%  Similarity=0.105  Sum_probs=93.8

Q ss_pred             eeEEEECCCCceEEEee-----CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEe--
Q psy8758           4 VTHTVWSLDNKFVISAS-----DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYD--   74 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~-----~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d--   74 (198)
                      +-.++.|||.+++|-+-     ..-++++-|+.+++......    ......++|.+|++.++.+-..++.  =++|-  
T Consensus       131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i----~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~  206 (682)
T COG1770         131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEI----TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHR  206 (682)
T ss_pred             eeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhh----cccccceEEecCCCeEEEEEEcCCCCcceEEEEe
Confidence            45678899999887652     33468888888876432221    2235678999999999887544432  22332  


Q ss_pred             ccCC--CC--ccccccC-------------ceEEEe--cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC--C-CE
Q psy8758          75 IRQL--NS--PLNVHKD-------------MTSAAA--NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT--G-RE  132 (198)
Q Consensus        75 ~~~~--~~--~~~~~~~-------------~~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~--~-~~  132 (198)
                      +.+.  ..  .+.....             .+++..  ...+.+++.+...+...-+.+.....   .+.+..+  + .+
T Consensus       207 ~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~---g~eY~~eh~~d~f  283 (682)
T COG1770         207 LGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPREN---GVEYSVEHGGDRF  283 (682)
T ss_pred             cCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCC---CcEEeeeecCcEE
Confidence            2221  11  1111111             122222  23355777777664432222222111   1222221  3 34


Q ss_pred             EEEeecCC-cEEEEEcCC--CceeeEEeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCCcc
Q psy8758         133 FVAGGYDK-SLRLYLAHQ--GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHASEK  195 (198)
Q Consensus       133 l~~~~~d~-~v~v~d~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~~~  195 (198)
                      ++..+.+| ..+++....  .+.-......|...+.--.|+--..+|+....+   ..|++++.++++.
T Consensus       284 ~i~sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~  352 (682)
T COG1770         284 YILSNADGKNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEE  352 (682)
T ss_pred             EEEecCCCcceEEEEccCCCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCce
Confidence            55555555 556665544  111111123555555555555555566554332   3577888877664

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=87.03  E-value=10  Score=27.92  Aligned_cols=75  Identities=16%  Similarity=0.247  Sum_probs=43.5

Q ss_pred             CCcceEEEEEccCCCEEEEeec-----CC--c-------EEEEEc--CC-Cceee--EEecc------CcccEEEEEEcC
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGY-----DK--S-------LRLYLA--HQ-GHSRD--IYHTK------RMQHVTHTVWSL  171 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~-----d~--~-------v~v~d~--~~-~~~~~--~~~~~------~~~~v~~~~~s~  171 (198)
                      ......+|+++|+|+.|.+..+     |+  .       ++++..  .+ +....  .+...      ....+..+.+-+
T Consensus       145 ~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~  224 (326)
T PF13449_consen  145 NNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALP  224 (326)
T ss_pred             CCCCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEEC
Confidence            4556889999999996665533     22  1       455544  43 22221  22111      346789999999


Q ss_pred             CCCEEEEe-----cCCCeEEEEecC
Q psy8758         172 DNKFVISA-----SDEMNLRVWKAH  191 (198)
Q Consensus       172 ~~~~l~~~-----~~dg~v~~w~~~  191 (198)
                      ++++|+-=     .....++++.+.
T Consensus       225 d~~lLvLER~~~~~~~~~~ri~~v~  249 (326)
T PF13449_consen  225 DGRLLVLERDFSPGTGNYKRIYRVD  249 (326)
T ss_pred             CCcEEEEEccCCCCccceEEEEEEE
Confidence            99976632     123455555543

>KOG1897|consensus

Probab=86.75  E-value=19  Score=30.70  Aligned_cols=115  Identities=9%  Similarity=0.032  Sum_probs=57.5

Q ss_pred             ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCe---EEEEecCCccEEEEeccCCCCccc
Q psy8758           9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAF---VFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~---~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      -+.+...++.++.++.+...++..+. +........+..|.|+.++|-  ++.   +++.|..+..+.+.-.-       
T Consensus       495 ~~~n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~-------  566 (1096)
T KOG1897|consen  495 VSANASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFL-------  566 (1096)
T ss_pred             EeecceEEEEecCccEEEEEEeeccc-eeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEEC-------
Confidence            33344455555555555555555443 333433445667788888864  333   55555444443322211       


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                 .|..+..-.       ....+.-+..|--..+--|..+|.++..||.+..|-+..
T Consensus       567 -----------pd~~~~~~~-------~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~  614 (1096)
T KOG1897|consen  567 -----------PDLILITHE-------QLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDI  614 (1096)
T ss_pred             -----------CCcceeeee-------ccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEc
Confidence                       111110000       000011233344455555678999999999887765543

>PLN02193 nitrile-specifier protein

Probab=86.71  E-value=13  Score=28.94  Aligned_cols=65  Identities=11%  Similarity=0.133  Sum_probs=36.1

Q ss_pred             CCCEEEEeecC----CcEEEEEcCCCceeeEEecc--CcccEEEEEEcCCCCEEEEecCC--------------CeEEEE
Q psy8758         129 TGREFVAGGYD----KSLRLYLAHQGHSRDIYHTK--RMQHVTHTVWSLDNKFVISASDE--------------MNLRVW  188 (198)
Q Consensus       129 ~~~~l~~~~~d----~~v~v~d~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d--------------g~v~~w  188 (198)
                      +++.++.++.+    ..+.+||+.+.+.......+  ........+..-++++++.|+.+              +.+.++
T Consensus       328 ~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~  407 (470)
T PLN02193        328 QGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFAL  407 (470)
T ss_pred             CCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEE
Confidence            56777777655    46899999887664432111  01111111222356677777643              247788


Q ss_pred             ecCCC
Q psy8758         189 KAHAS  193 (198)
Q Consensus       189 ~~~~~  193 (198)
                      |+.+.
T Consensus       408 D~~t~  412 (470)
T PLN02193        408 DTETL  412 (470)
T ss_pred             EcCcC
Confidence            87654

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=86.54  E-value=7.8  Score=28.17  Aligned_cols=71  Identities=15%  Similarity=0.255  Sum_probs=47.8

Q ss_pred             ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCccc--EE--EEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH--VT--HTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~--v~--~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      .++++...++|.+|++.-.-..|.+.|-++++.+..+.....+.  +.  ..+|-.|-+++-.+..++.|.++|=
T Consensus       145 HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN  219 (299)
T PF14269_consen  145 HINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN  219 (299)
T ss_pred             EeeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence            48889999999999999999999999999998888762221110  11  1223233444444456777777775

>KOG1898|consensus

Probab=86.22  E-value=21  Score=30.72  Aligned_cols=60  Identities=17%  Similarity=0.150  Sum_probs=34.2

Q ss_pred             CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE
Q psy8758          95 EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI  155 (198)
Q Consensus        95 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~  155 (198)
                      .+|.++.|++-..++.+..+....-+-.-.+..|-..++.+| ....+++||+...+++..
T Consensus       910 ~~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk  969 (1205)
T KOG1898|consen  910 SSGFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQGRVLAG-VGRFLRLYDLGKKKLLRK  969 (1205)
T ss_pred             CCCceEEEEEEecCceeeeeeccCCCccceEEeccCCEEEEe-cccEEEEeeCChHHHHhh
Confidence            456677777655455444332222222235666766655544 456899999987655443

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=86.05  E-value=1.9  Score=18.63  Aligned_cols=25  Identities=12%  Similarity=0.197  Sum_probs=17.3

Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      ...++.+++|+.+++=+....|+++
T Consensus         4 P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    4 PHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CcEEEEeCCCCEEEEECCCCEEEEC
Confidence            4567777788777766666666654

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>PLN02153 epithiospecifier protein

Probab=85.49  E-value=13  Score=27.53  Aligned_cols=54  Identities=6%  Similarity=0.042  Sum_probs=28.1

Q ss_pred             CcEEEEEcCCCceeeEEecc--CcccEEEEEEcCCCCEEEEecCC--------------CeEEEEecCCC
Q psy8758         140 KSLRLYLAHQGHSRDIYHTK--RMQHVTHTVWSLDNKFVISASDE--------------MNLRVWKAHAS  193 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d--------------g~v~~w~~~~~  193 (198)
                      +.+.+||..+.+.......+  ........+...++++++.|+..              +.+..+|+.+.
T Consensus       217 ~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~  286 (341)
T PLN02153        217 NAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL  286 (341)
T ss_pred             CceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence            46889998887655432111  00111111222356677777641              25778887654

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=85.44  E-value=4.1  Score=29.24  Aligned_cols=54  Identities=17%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec------CCCeEEEEecCCCc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS------DEMNLRVWKAHASE  194 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~v~~w~~~~~~  194 (198)
                      ..|++||....+....- .+-.+.|.++.|..+.+.++.|.      ....+..||+++..
T Consensus        16 ~~lC~yd~~~~qW~~~g-~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~   75 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPG-NGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT   75 (281)
T ss_pred             CEEEEEECCCCEeecCC-CCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe
Confidence            46999999887765543 33457899999997777777663      35568888887643

>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein

Probab=85.26  E-value=5.5  Score=25.05  Aligned_cols=64  Identities=11%  Similarity=0.062  Sum_probs=47.4

Q ss_pred             EEEeecCCcEEEEEcCCCceeeEEeccCcccEEEE-----------EEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT-----------VWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~-----------~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+....||.+.+++..+++.+..+..++.+.+..+           ....+..+-++--.||.+.+-|..||+.+
T Consensus        44 ~f~d~~~G~v~V~~~~~G~~va~~~~g~~GFvrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~i  118 (135)
T TIGR03054        44 VFEDRPDGAVAVVETPDGRLVAILEPGQNGFVRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWSI  118 (135)
T ss_pred             EEecCCCCeEEEEECCCCCEEEEecCCCCchhhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcEE
Confidence            44556789999999999999988866554433321           13456668888889999999999998764

In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=84.85  E-value=13  Score=27.18  Aligned_cols=13  Identities=15%  Similarity=0.401  Sum_probs=9.1

Q ss_pred             cEEEEEcCCCcee
Q psy8758         141 SLRLYLAHQGHSR  153 (198)
Q Consensus       141 ~v~v~d~~~~~~~  153 (198)
                      .+.+||+.+.+..
T Consensus       272 ~v~~yd~~~~~W~  284 (323)
T TIGR03548       272 KILIYNVRTGKWK  284 (323)
T ss_pred             eEEEEECCCCeee
Confidence            5788888776543

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=84.62  E-value=13  Score=27.07  Aligned_cols=154  Identities=10%  Similarity=0.022  Sum_probs=88.9

Q ss_pred             EEEeeCCCeEEEEEccCCce--eeeeeeee--ecCce-eeEEeC--CCCCeEEEEecCCccEEEEeccCCCCccccc---
Q psy8758          16 VISASDEMNLRVWKAHASEK--LGPIRKVV--MSLRS-NMVSWN--PMEAFVFTAANEDFNLYSYDIRQLNSPLNVH---   85 (198)
Q Consensus        16 l~~~~~d~~i~i~~~~~~~~--~~~~~~~~--~~~~v-~~~~~~--~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~---   85 (198)
                      ++.+++||+|.-|...-...  ...+....  ....| ..+++.  ..+.+|+++--..++|-++|-.-....+...   
T Consensus       103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~D  182 (336)
T TIGR03118       103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFID  182 (336)
T ss_pred             EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccC
Confidence            56778999999998543221  01111111  11222 344544  3467777766668999999865332111100   


Q ss_pred             ---------------cCceEE-------------EecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccC------
Q psy8758          86 ---------------KDMTSA-------------AANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPT------  129 (198)
Q Consensus        86 ---------------~~~~~~-------------~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~------  129 (198)
                                     ...+++             .+..-|.|-++|+.  +..++++.  +.-.....|+..|-      
T Consensus       183 P~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~--G~l~~r~as~g~LNaPWG~a~APa~FG~~s  260 (336)
T TIGR03118       183 PALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN--GQLLRRVASSGRLNAPWGLAIAPESFGSLS  260 (336)
T ss_pred             CCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC--CcEEEEeccCCcccCCceeeeChhhhCCCC
Confidence                           011111             22233678888887  46666663  22334566777663      


Q ss_pred             CCEEEEeecCCcEEEEEcCCCceeeEEeccCc-----ccEEEEEEcC
Q psy8758         130 GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM-----QHVTHTVWSL  171 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~-----~~v~~~~~s~  171 (198)
                      |.+|+---.||+|..||..+++.+-.+.....     ..++.+.|-.
T Consensus       261 g~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       261 GALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             CCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence            55666666799999999999887766533222     3578899865

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG3522|consensus

Probab=84.15  E-value=8.2  Score=32.00  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=48.9

Q ss_pred             eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         112 NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       112 ~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ..+.....++.+.++..|   ++.++.+|.|.++...+.......  +..|...|+++.....+=+++..+.| .+++++
T Consensus       620 ~~~~~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~-~~rlfh  695 (925)
T KOG3522|consen  620 ISIPTGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGD-EERLFH  695 (925)
T ss_pred             cccccCCccccchhhhhc---eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCC-EEEEec
Confidence            333445567777777644   556677899999998775433322  34455689999888777777665544 344444


Q ss_pred             cCC
Q psy8758         190 AHA  192 (198)
Q Consensus       190 ~~~  192 (198)
                      ..+
T Consensus       696 tet  698 (925)
T KOG3522|consen  696 TET  698 (925)
T ss_pred             ccc
Confidence            443

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=83.85  E-value=24  Score=29.52  Aligned_cols=74  Identities=12%  Similarity=0.147  Sum_probs=43.5

Q ss_pred             ceeEEEECC-CCceEEEeeCCCeEEEEEccCCce--eeeeeee-----------eecCceeeEEeCCCCCeEEEEecCCc
Q psy8758           3 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASEK--LGPIRKV-----------VMSLRSNMVSWNPMEAFVFTAANEDF   68 (198)
Q Consensus         3 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~-----------~~~~~v~~~~~~~~~~~~~~~~~~d~   68 (198)
                      +..+++|+| +.+.||.....|.-.||++.....  ...+...           .....-..+.|.++...++++  ...
T Consensus       147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~--~r~  224 (765)
T PF10214_consen  147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVC--NRS  224 (765)
T ss_pred             ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEE--cCC
Confidence            456899999 446899999999999999921110  0111100           001112356676666666653  345


Q ss_pred             cEEEEeccCC
Q psy8758          69 NLYSYDIRQL   78 (198)
Q Consensus        69 ~i~~~d~~~~   78 (198)
                      .+.++|+.+.
T Consensus       225 ~l~~~d~~~~  234 (765)
T PF10214_consen  225 KLMLIDFESN  234 (765)
T ss_pred             ceEEEECCCC
Confidence            6666666643

These proteins are found in fungi.

>KOG1520|consensus

Probab=83.76  E-value=16  Score=27.39  Aligned_cols=40  Identities=18%  Similarity=0.125  Sum_probs=27.4

Q ss_pred             cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         138 YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .+|.+.-||..+.......  ..-...+.++.|||+.+++.+
T Consensus       197 ~~GRl~~YD~~tK~~~VLl--d~L~F~NGlaLS~d~sfvl~~  236 (376)
T KOG1520|consen  197 PTGRLFRYDPSTKVTKVLL--DGLYFPNGLALSPDGSFVLVA  236 (376)
T ss_pred             CccceEEecCcccchhhhh--hcccccccccCCCCCCEEEEE
Confidence            4677888887776553333  122456788999999988776

>PHA02790 Kelch-like protein; Provisional

Probab=83.67  E-value=19  Score=28.16  Aligned_cols=101  Identities=8%  Similarity=0.013  Sum_probs=46.4

Q ss_pred             CceEEEecCC--CcEEEEEccCCCcceeeecCCCcce-EEEEEccCCCEEEEeecCC---cEEEEEcCCCceeeEEeccC
Q psy8758          87 DMTSAAANED--FNLYSYDIRQLNSPLNVHKDMTSAV-TSVDYSPTGREFVAGGYDK---SLRLYLAHQGHSRDIYHTKR  160 (198)
Q Consensus        87 ~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~i-~~~~~sp~~~~l~~~~~d~---~v~v~d~~~~~~~~~~~~~~  160 (198)
                      +.+++.|+.+  ..+..||..+ ..- .....-+.+. ......-+|+..+.|+.++   .+..||..+.+....-....
T Consensus       319 ~~iYviGG~~~~~sve~ydp~~-n~W-~~~~~l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~  396 (480)
T PHA02790        319 NKLYVVGGLPNPTSVERWFHGD-AAW-VNMPSLLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY  396 (480)
T ss_pred             CEEEEECCcCCCCceEEEECCC-CeE-EECCCCCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC
Confidence            3456666643  3577788654 211 1111111111 1111223677778877653   47788887765433211111


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                       ..-...+..-+++..+.|+   .+.+||.++.
T Consensus       397 -~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~  425 (480)
T PHA02790        397 -PHYKSCALVFGRRLFLVGR---NAEFYCESSN  425 (480)
T ss_pred             -ccccceEEEECCEEEEECC---ceEEecCCCC
Confidence             0001111223555555553   3566776543

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=83.38  E-value=11  Score=27.39  Aligned_cols=62  Identities=15%  Similarity=0.207  Sum_probs=41.1

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ++++++.|+++|.. +.++....  ..+........|.++...+..+.+++-++....++.+++.
T Consensus        12 ~~~~lL~GTe~Gly-~~~~~~~~--~~~~kl~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~   73 (302)
T smart00036       12 DGKWLLVGTEEGLY-VLNISDQP--GTLEKLIGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS   73 (302)
T ss_pred             CCcEEEEEeCCceE-EEEcccCC--CCeEEecCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence            34689999999854 44554321  1222222356788999998888887776556669999984

Unpublished observations.

>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides

Probab=82.59  E-value=4.7  Score=23.17  Aligned_cols=30  Identities=13%  Similarity=0.302  Sum_probs=25.3

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ..+.+.++|+++.++++......|.+|..+
T Consensus        55 ~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~   84 (86)
T PF01731_consen   55 FANGIAISPDKKYLYVASSLAHSIHVYKRH   84 (86)
T ss_pred             CCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence            347899999999999988788899988764

The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	198
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		3e-06
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		5e-06
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		5e-06
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		6e-06
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		6e-06
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		6e-06
2g99_A	308	Structural Basis For The Specific Recognition Of Me		6e-06
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		6e-06
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		6e-06
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		6e-06
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		6e-06
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		6e-06
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		6e-06
2h9l_A	329	Wdr5delta23 Length = 329		6e-06
2gnq_A	336	Structure Of Wdr5 Length = 336		7e-06
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		7e-06
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		7e-06
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		4e-04

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    A   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 26  TKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 84
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 85  SASDDKTLKIWDVSSGKCLK 104

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 26  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 84
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 85  SASDDKTLKIWDVSSGKCLK 104

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 26  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 84
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 85  SASDDKTLKIWDVSSGKCLK 104

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 29  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 87
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 88  SASDDKTLKIWDVSSGKCLK 107

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 23  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 81
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 82  SASDDKTLKIWDVSSGKCLK 101

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 29  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 87
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 88  SASDDKTLKIWDVSSGKCLK 107

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 19  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 77
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 78  SASDDKTLKIWDVSSGKCLK 97

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 45  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSNLLV 103
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 104 SASDDKTLKIWDVSSGKCLK 123

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 24  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 82
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 83  SASDDKTLKIWDVSSGKCLK 102

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 29  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 87
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 88  SASDDKTLKIWDVSSGKCLK 107

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 28  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 86
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 87  SASDDKTLKIWDVSSGKCLK 106

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 22  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 80
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 81  SASDDKTLKIWDVSSGKCLK 100

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 23  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 81
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 82  SASDDKTLKIWDVSSGKCLK 101

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 40  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 98
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 99  SASDDKTLKIWDVSSGKCLK 118

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 47  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL-GISDVAWSSDSNLLV 105
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 106 SASDDKTLKIWDVSSGKCLK 125

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 26  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 84
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 85  SASDDKTLKIWDVSSGKCLK 104

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 177
           T AV+SV +SP G    +   DK ++++ A+ G         ++  ++   WS D+  ++
Sbjct: 26  TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 84
Query: 178 SASDEMNLRVWKAHASEKLE 197
           SASD+  L++W   + + L+
Sbjct: 85  SASDDKTLKIWDVSSGKCLK 104

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT------VWSL 171
           T  V SV Y+P G  F + G D ++ LY    G    ++    +++V H+       WS 
Sbjct: 190 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP 249
Query: 172 DNKFVISASDEMNLRVWKAHASEKLE 197
           D   + SAS +  +++W   A+ K+E
Sbjct: 250 DGTKIASASADKTIKIWNV-ATLKVE 274

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	198
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.98
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.98
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.98
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.98
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.98
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.98
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.98
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.98
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.98
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.98
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.98
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.98
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.97
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.97
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.97
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.97
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.97
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.97
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.97
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.96
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.96
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.96
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.95
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.95
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.95
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.94
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.94
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.93
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.93
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.93
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.93
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.93
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.92
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.9
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.9
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.9
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.89
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.89
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.89
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.89
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.89
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.88
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.88
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.88
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.88
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.87
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.86
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.86
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.86
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.85
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.84
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.84
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.84
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.84
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.83
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.83
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.82
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.81
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.81
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.81
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.8
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.8
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.79
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.77
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.75
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.74
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.74
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.73
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.73
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.72
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.71
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.69
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.69
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.68
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.68
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.68
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.67
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.67
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.67
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.67
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.65
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.65
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.65
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.64
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.63
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.62
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.61
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.6
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.6
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.59
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.58
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.58
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.58
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.57
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.56
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.55
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.53
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.52
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.52
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.5
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.5
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.49
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.49
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.49
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.49
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.44
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.44
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.42
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.42
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.41
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.4
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.39
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.39
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.33
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.32
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.31
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.3
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.29
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.28
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.24
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.24
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.23
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.22
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.2
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.19
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.16
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.15
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.14
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.13
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.08
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.06
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.01
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.0
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.99
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.96
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.91
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.91
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.89
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.88
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.87
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.86
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.85
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.82
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.81
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.81
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.75
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.73
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.72
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.69
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.69
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.64
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.62
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.61
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.59
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.57
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.56
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.55
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.55
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.53
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.52
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.51
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.51
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.45
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.43
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.43
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.42
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.41
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.4
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.39
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.39
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.37
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.33
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.29
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.28
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.27
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.27
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.26
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.23
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.19
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.19
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	98.17
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.14
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.11
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.09
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.04
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.03
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.02
4a2l_A	795	BT_4663, two-component system sensor histidine kin	97.99
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.98
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.96
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.92
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.91
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.89
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.85
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.85
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.82
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.79
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.76
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.73
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.65
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.58
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.5
3v9f_A	781	Two-component system sensor histidine kinase/RESP	97.47
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.46
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.42
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.42
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.42
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	97.42
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.4
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.34
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.3
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.26
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.22
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.12
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.11
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.06
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.96
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	96.95
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.88
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.8
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.76
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.74
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.47
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.46
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.39
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.36
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.33
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.31
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.27
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.22
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.15
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.03
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	95.93
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	95.85
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	95.74
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	95.72
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	95.61
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	95.48
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	95.32
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.31
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	95.21
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.18
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	94.39
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	94.33
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	93.58
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	92.13
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	90.58
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	90.27
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	89.75
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	89.1
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	88.39
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	88.04
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	86.93
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	83.64
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	80.6

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=235.13  Aligned_cols=188  Identities=15%  Similarity=0.153  Sum_probs=160.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|++++|+|+|++|++|+.|+.|++||+.+++....+..  |...|.+++|+|++..++++++.|+.|++||+++.+..
T Consensus       128 ~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~--h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~  205 (344)
T 4gqb_B          128 DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA--HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA  205 (344)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE
T ss_pred             CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC--cCCceEEEEecCCCCCceeeecccccccccccccccee
Confidence            4699999999999999999999999999999887666654  57889999999999877777889999999999865432


Q ss_pred             c----------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCcEEE
Q psy8758          82 L----------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRL  144 (198)
Q Consensus        82 ~----------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v  144 (198)
                      .                ......++++++.|+.|++||+++ ++++..+.+|...|++++|+|++ ++|++++.|++|++
T Consensus       206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~v  284 (344)
T 4gqb_B          206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV  284 (344)
T ss_dssp             EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred             eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEE
Confidence            1                112345789999999999999998 78889999999999999999998 58999999999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ||+.+++....  .+|...|++++|+|+++ +|++++.|++|++|++.+..
T Consensus       285 wd~~~~~~~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          285 LDSSLSELFRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             ECTTCCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             EECCCCcEEEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            99999886543  68999999999999986 57789999999999998754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=3.4e-38  Score=228.38  Aligned_cols=187  Identities=17%  Similarity=0.159  Sum_probs=160.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|++++|+|++++|++++.|+.|++||+.+++....+..  |...|.+++|+|++..++++++.|+.|++||+++....
T Consensus       140 ~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~  217 (357)
T 4g56_B          140 DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA--HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA  217 (357)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB
T ss_pred             CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC--CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee
Confidence            4699999999999999999999999999998887666654  57789999999998766666789999999999765421


Q ss_pred             c--------------cc--ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCcEEE
Q psy8758          82 L--------------NV--HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRL  144 (198)
Q Consensus        82 ~--------------~~--~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v  144 (198)
                      .              ..  ..+.++++++.|+.|++||+++ .+++..+..|...|++++|+|++ ++|++++.|++|+|
T Consensus       218 ~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i  296 (357)
T 4g56_B          218 TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV  296 (357)
T ss_dssp             CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred             eeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence            1              11  2245788999999999999998 68888999999999999999987 58999999999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCC
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ||+++++.+..  .+|...|++++|+| ++++|++++.||+|++|++.+.
T Consensus       297 wd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          297 LDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             ECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             EECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            99999987765  47999999999999 7999999999999999999754

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.7e-37  Score=219.12  Aligned_cols=192  Identities=12%  Similarity=0.263  Sum_probs=165.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|++++|+|++++|++++.||.|++||+.+++....+..  +..++.+++|+|+++.+++ |+.|+.|++||+.+... 
T Consensus        14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s-~s~d~~i~vwd~~~~~~~   90 (304)
T 2ynn_A           14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV--TETPVRAGKFIARKNWIIV-GSDDFRIRVFNYNTGEKV   90 (304)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTEEEE-EETTSEEEEEETTTCCEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec--cCCcEEEEEEeCCCCEEEE-ECCCCEEEEEECCCCcEE
Confidence            5799999999999999999999999999998876666554  4678999999999998876 56999999999986543 


Q ss_pred             -cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEc
Q psy8758          81 -PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 -~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~  147 (198)
                       .+..|.           +..+++++.|++|++||+++.......+.+|...|.+++|+| ++..|++++.|+.|++||+
T Consensus        91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~  170 (304)
T 2ynn_A           91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL  170 (304)
T ss_dssp             EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred             EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence             233343           346899999999999999974456677889999999999999 5789999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+.....+..+|...+..+.|+|  ++++|++++.|+.|++||+++++++
T Consensus       171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~  221 (304)
T 2ynn_A          171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV  221 (304)
T ss_dssp             TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred             CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence            988877777667778899999987  6789999999999999999998764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=5.3e-37  Score=220.76  Aligned_cols=190  Identities=21%  Similarity=0.338  Sum_probs=166.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|.+++|+|++++|++++.||.|++||+.+++....+..  +...|.+++|+|+++++++ ++.|+.+++|++.+... 
T Consensus        56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s-~~~d~~v~iw~~~~~~~~  132 (340)
T 1got_B           56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGNYVAC-GGLDNICSIYNLKTREGN  132 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--SSSCEEEEEECTTSSEEEE-EETTCEEEEEETTTCSBS
T ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec--CCccEEEEEECCCCCEEEE-EeCCCeEEEEECccCCCc
Confidence            5799999999999999999999999999988876665544  5778999999999998876 46899999999876431 


Q ss_pred             -----cccccc----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          81 -----PLNVHK----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        81 -----~~~~~~----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                           .+..|.          +..+++++.|+.|++||+++ ++++..+.+|...|.+++|+|+++++++++.|+.|++|
T Consensus       133 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w  211 (340)
T 1got_B          133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET-GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW  211 (340)
T ss_dssp             CEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCC-CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence                 122332          34588999999999999998 68888899999999999999999999999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |++++.....+ .+|...|.+++|+|++++|++++.||.|++||+++++.+
T Consensus       212 d~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~  261 (340)
T 1got_B          212 DVREGMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL  261 (340)
T ss_dssp             ETTTCSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             ECCCCeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence            99999888776 688899999999999999999999999999999887653

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.5e-37  Score=219.55  Aligned_cols=190  Identities=14%  Similarity=0.230  Sum_probs=167.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|.+++|+|++.++++++.|+.|++||+.+++....+..  +...+.+++|+|+++.+++ ++.++.+++|+++.....
T Consensus        81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~-g~~dg~v~i~~~~~~~~~  157 (321)
T 3ow8_A           81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA--GPVDAWTLAFSPDSQYLAT-GTHVGKVNIFGVESGKKE  157 (321)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CTTCCCCEEECTTSSEEEE-ECTTSEEEEEETTTCSEE
T ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC--CCccEEEEEECCCCCEEEE-EcCCCcEEEEEcCCCcee
Confidence            4689999999999999999999999999998887666554  4667889999999998876 579999999999865432


Q ss_pred             cc--c-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 LN--V-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 ~~--~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..  .           ..+..+++++.|+.|++||+++ ++.+..+.+|..+|.+++|+|++++|++++.|+.|++||++
T Consensus       158 ~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~  236 (321)
T 3ow8_A          158 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ  236 (321)
T ss_dssp             EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred             EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence            21  1           2345799999999999999998 68888899999999999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++....+ .+|...|.+++|+|++++|++++.|+.|++||+++++++
T Consensus       237 ~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~  283 (321)
T 3ow8_A          237 HANLAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV  283 (321)
T ss_dssp             TCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             CcceeEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence            99887776 689999999999999999999999999999999988765

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.8e-37  Score=237.49  Aligned_cols=194  Identities=18%  Similarity=0.272  Sum_probs=164.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---ccEEEEeccCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---FNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~~~d~~~~   78 (198)
                      ..|++++|+|+|++||+|+.|+.|+|||+.+++.........|...|.+++|+|+++.+++++..+   +.|++||....
T Consensus        60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~  139 (611)
T 1nr0_A           60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS  139 (611)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred             CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC
Confidence            469999999999999999999999999997654332222223678899999999999998876432   58999997665


Q ss_pred             CCccccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          79 NSPLNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        79 ~~~~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      ...+.+|..            ..+++++.|++|++||.++ .+....+.+|...|.+++|+|+|++|++++.|++|++||
T Consensus       140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd  218 (611)
T 1nr0_A          140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN  218 (611)
T ss_dssp             CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence            555555532            3599999999999999887 677788899999999999999999999999999999999


Q ss_pred             cCCCceeeEEec------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYHT------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+++....+..      +|...|.+++|+|++++|++++.|++|++||+++++++
T Consensus       219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~  274 (611)
T 1nr0_A          219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE  274 (611)
T ss_dssp             TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence            999988776533      79999999999999999999999999999999988754

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=4.5e-37  Score=221.34  Aligned_cols=191  Identities=21%  Similarity=0.220  Sum_probs=155.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee--eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR--KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|.+++|+|++ .+++++.||.|+|||+.+++......  ...|...|.+++|+|+++++++ |+.|+.|++||+++..
T Consensus        83 ~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~s-gs~d~~i~iwd~~~~~  160 (344)
T 4gqb_B           83 AGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVS-GSKDICIKVWDLAQQV  160 (344)
T ss_dssp             SCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTE
T ss_pred             CCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEE-EeCCCeEEEEECCCCc
Confidence            358999999986 57789999999999999887654443  2347889999999999999876 5799999999998654


Q ss_pred             C--cccccc------------CceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccC-CCEEEEeecCCcE
Q psy8758          80 S--PLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPT-GREFVAGGYDKSL  142 (198)
Q Consensus        80 ~--~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~-~~~l~~~~~d~~v  142 (198)
                      .  .+..|.            ..++++++.|++|++||+++ .++...+.  .+...+.+++|+|+ +++|++++.|+.|
T Consensus       161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v  239 (344)
T 4gqb_B          161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV  239 (344)
T ss_dssp             EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred             EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence            2  233332            24689999999999999998 56666653  35567899999995 5688999999999


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++||+++++++..+ .+|...|++++|+|++ ++|++++.|++|++||+++++++
T Consensus       240 ~~wd~~~~~~~~~~-~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~  293 (344)
T 4gqb_B          240 SLVDTKSTSCVLSS-AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF  293 (344)
T ss_dssp             EEEESCC--CCEEE-ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred             EEEECCCCcEEEEE-cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence            99999999988877 6899999999999998 57999999999999999998764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=9e-37  Score=216.44  Aligned_cols=191  Identities=16%  Similarity=0.277  Sum_probs=162.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      .+|.+++|+|++++|++|+.|+.|++||+.+++....+..  |...|.+++|+|+++++++ |+.|+.|++||+++... 
T Consensus        56 ~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s-gs~D~~v~lWd~~~~~~~  132 (304)
T 2ynn_A           56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA--HPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWAL  132 (304)
T ss_dssp             SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSEEEE-EETTSCEEEEEGGGTTEE
T ss_pred             CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC--CCCcEEEEEEcCCCCEEEE-ECCCCeEEEEECCCCcch
Confidence            4689999999999999999999999999999887666654  5788999999999998876 57999999999876421 


Q ss_pred             --ccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc--CCCEEEEeecCCcEEE
Q psy8758          81 --PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDKSLRL  144 (198)
Q Consensus        81 --~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~d~~v~v  144 (198)
                        .+..|            ....+++++.|++|++||+++..........+...+..++|+|  ++++|++++.|+.|++
T Consensus       133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~i  212 (304)
T 2ynn_A          133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI  212 (304)
T ss_dssp             EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEE
T ss_pred             hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEE
Confidence              22222            2357999999999999999874333334445668899999987  6789999999999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ||+++++++..+ .+|...|..++|+|++++|++++.||.|++||+++++.+
T Consensus       213 Wd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~  263 (304)
T 2ynn_A          213 WDYQTKSCVATL-EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE  263 (304)
T ss_dssp             EETTTTEEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred             EeCCCCccceee-CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence            999999988877 689999999999999999999999999999999988764

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.3e-36  Score=215.05  Aligned_cols=184  Identities=14%  Similarity=0.217  Sum_probs=161.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .+.+++|+|++++|++++.|+.+++|++.+++....+..  +...+.+++|+|+++++++ ++.|+.|++||+++...  
T Consensus       124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~--~~~~v~~~~~spdg~~las-g~~dg~i~iwd~~~~~~~~  200 (321)
T 3ow8_A          124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT--RGKFILSIAYSPDGKYLAS-GAIDGIINIFDIATGKLLH  200 (321)
T ss_dssp             CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC--SSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEEEE
T ss_pred             cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC--CCceEEEEEECCCCCEEEE-EcCCCeEEEEECCCCcEEE
Confidence            577899999999999999999999999998876555543  4667999999999999876 56999999999976542  


Q ss_pred             ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      .+..|           .+..+++++.|+.|++||++. ......+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus       201 ~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~  279 (321)
T 3ow8_A          201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT  279 (321)
T ss_dssp             EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence            22222           235799999999999999998 677888899999999999999999999999999999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ++++..+ .+|...|.+++|+|++++|++++.||.|++||+.
T Consensus       280 ~~~~~~~-~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          280 RTCVHTF-FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CEEEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9988877 6788999999999999999999999999999974

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=7.8e-36  Score=212.12  Aligned_cols=191  Identities=18%  Similarity=0.318  Sum_probs=166.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|++++|+|++++|++++.||.|++|++.+++....+..  |...|.+++|+|+++.++++ +.|+.|++||+++... 
T Consensus        24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~~  100 (312)
T 4ery_A           24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCL  100 (312)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEE
T ss_pred             CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc--CCCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcEE
Confidence            5799999999999999999999999999988876665543  57789999999999988764 6899999999986542 


Q ss_pred             -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+..|           .+..+++++.|+.|++||+++ .+.+..+..|..++.+++|+|++++|++++.|+.|++||++
T Consensus       101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  179 (312)
T 4ery_A          101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA  179 (312)
T ss_dssp             EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence             22223           235789999999999999998 67888888999999999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++.+..+...+...+..++|+|++++|++++.||.|++||+++++.+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  227 (312)
T 4ery_A          180 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL  227 (312)
T ss_dssp             TCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred             CCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence            998887776667788999999999999999999999999999988754

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=2.9e-36  Score=221.90  Aligned_cols=190  Identities=16%  Similarity=0.310  Sum_probs=166.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|.+++|+|++++|++|+.|+.|++||+.+++....+..  |...|.+++|+|++..+++ ++.|+.|++||+++... 
T Consensus       151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~--h~~~V~~v~~~p~~~~l~s-~s~D~~i~~wd~~~~~~~  227 (410)
T 1vyh_C          151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG--HDHNVSSVSIMPNGDHIVS-ASRDKTIKMWEVQTGYCV  227 (410)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC--CSSCEEEEEECSSSSEEEE-EETTSEEEEEETTTCCEE
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC--CCCCEEEEEEeCCCCEEEE-EeCCCeEEEEECCCCcEE
Confidence            5799999999999999999999999999988876666654  5778999999999998876 56999999999986542 


Q ss_pred             -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-------------------
Q psy8758          81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-------------------  129 (198)
Q Consensus        81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-------------------  129 (198)
                       .+..|           .+..+++++.|+.|++||+++ ......+..|...+.+++|+|+                   
T Consensus       228 ~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (410)
T 1vyh_C          228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK  306 (410)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred             EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCC
Confidence             23333           235699999999999999998 6778888899999999999996                   


Q ss_pred             -CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         130 -GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       130 -~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                       +.+|++++.|+.|++||++++.++..+ .+|...|.+++|+|++++|++++.||.|++||+++++++
T Consensus       307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~  373 (410)
T 1vyh_C          307 PGPFLLSGSRDKTIKMWDVSTGMCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM  373 (410)
T ss_dssp             -CCEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             CCCEEEEEeCCCeEEEEECCCCceEEEE-ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence             678999999999999999999988777 688899999999999999999999999999999988764

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.3e-36  Score=220.45  Aligned_cols=190  Identities=18%  Similarity=0.268  Sum_probs=160.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ++|++++|+|++++|++|+.|++|++||+.+++....+..  |...|.+++|+|+++.+++ |+.|+.+++||+....  
T Consensus        67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~--h~~~v~~~~~s~~g~~las-~~~d~~v~iw~~~~~~~~  143 (380)
T 3iz6_a           67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL--HCPWVMECAFAPNGQSVAC-GGLDSACSIFNLSSQADR  143 (380)
T ss_dssp             SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--CCTTCCCCEECTTSSEEEE-CCSSSCCEEEECCCCSSC
T ss_pred             cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec--CCCCEEEEEECCCCCEEEE-eeCCCcEEEEECCCCccc
Confidence            5799999999999999999999999999998876666654  5778999999999998876 5799999999986421  


Q ss_pred             -------Ccccccc------------CceEEEecCCCcEEEEEccCCCcceeee-----cCCCcceEEEEEcc-CCCEEE
Q psy8758          80 -------SPLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVH-----KDMTSAVTSVDYSP-TGREFV  134 (198)
Q Consensus        80 -------~~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~~i~~~~~sp-~~~~l~  134 (198)
                             ..+.+|.            +..+++++.|++|++||+++ ++.+..+     .+|...+.+++|+| ++++|+
T Consensus       144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  222 (380)
T 3iz6_a          144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT-GQRISIFGSEFPSGHTADVLSLSINSLNANMFI  222 (380)
T ss_dssp             CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT-CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred             cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC-CcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence                   1233332            34699999999999999998 5666555     56888999999987 789999


Q ss_pred             EeecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         135 AGGYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++.|+.|++||++.. +....+ .+|...|.+++|+|++++|++++.||+|++||+++++.+
T Consensus       223 sgs~D~~v~~wd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~  284 (380)
T 3iz6_a          223 SGSCDTTVRLWDLRITSRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL  284 (380)
T ss_dssp             EEETTSCEEEEETTTTCCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred             EEECCCeEEEEECCCCCcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence            9999999999999854 555554 789999999999999999999999999999999988754

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7.1e-36  Score=213.16  Aligned_cols=188  Identities=17%  Similarity=0.259  Sum_probs=155.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~   80 (198)
                      +.|.+++|+|+++++++++.|+.|++||+.+++....+..  |...|.+++|+|++..+++ ++.|+.|++||++... .
T Consensus        66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s-~s~D~~i~vwd~~~~~~~  142 (319)
T 3frx_A           66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIIS-GSRDKTIKVWTIKGQCLA  142 (319)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEE-EETTSCEEEEETTSCEEE
T ss_pred             ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEE-EeCCCeEEEEECCCCeEE
Confidence            4689999999999999999999999999999887666654  5788999999999998876 5799999999986432 1


Q ss_pred             ccccc-----------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          81 PLNVH-----------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        81 ~~~~~-----------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      .+..|                 ....+++++.|+.|++||+++ .+....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus       143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~  221 (319)
T 3frx_A          143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIM  221 (319)
T ss_dssp             EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred             EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence            11122                 123689999999999999998 677788889999999999999999999999999999


Q ss_pred             EEEcCCCceeeEEec-----------------------------------------------cCcccEEEEEEcCCCCEE
Q psy8758         144 LYLAHQGHSRDIYHT-----------------------------------------------KRMQHVTHTVWSLDNKFV  176 (198)
Q Consensus       144 v~d~~~~~~~~~~~~-----------------------------------------------~~~~~v~~~~~s~~~~~l  176 (198)
                      +||+.+++.+..+..                                               .|...+.+++|+|||++|
T Consensus       222 iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l  301 (319)
T 3frx_A          222 LWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTL  301 (319)
T ss_dssp             EEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEE
T ss_pred             EEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEE
Confidence            999987665433210                                               123457788999999999


Q ss_pred             EEecCCCeEEEEecCCC
Q psy8758         177 ISASDEMNLRVWKAHAS  193 (198)
Q Consensus       177 ~~~~~dg~v~~w~~~~~  193 (198)
                      ++++.||.|++||+.++
T Consensus       302 ~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          302 FAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             EEEETTSCEEEEEEEEC
T ss_pred             EEeecCceEEEEEEeec
Confidence            99999999999998775

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=6.8e-36  Score=219.95  Aligned_cols=190  Identities=13%  Similarity=0.283  Sum_probs=167.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|++++|+|+++++++|+.||.|++||+.+++....+..  |...|.+++|+|+++.+++ |+.|+.|++||+.+... 
T Consensus       109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~--h~~~V~~v~~~~~~~~l~s-gs~D~~i~iwd~~~~~~~  185 (410)
T 1vyh_C          109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG--HTDSVQDISFDHSGKLLAS-CSADMTIKLWDFQGFECI  185 (410)
T ss_dssp             SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC--CSSCEEEEEECTTSSEEEE-EETTSCCCEEETTSSCEE
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec--cCCcEEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCcee
Confidence            5799999999999999999999999999999887666654  5788999999999998776 57999999999976442 


Q ss_pred             -cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+..|.           +..+++++.|+.|++||+++ +.++..+.+|...+.+++++|++++|++++.|+.|++||+.
T Consensus       186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~  264 (410)
T 1vyh_C          186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA  264 (410)
T ss_dssp             ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence             233332           35689999999999999998 68888999999999999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCC--------------------CCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLD--------------------NKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~--------------------~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++....+ .+|...|.+++|+|+                    +.+|++++.|+.|++||+++++++
T Consensus       265 ~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~  331 (410)
T 1vyh_C          265 TKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL  331 (410)
T ss_dssp             TCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred             CCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence            99888776 688899999999996                    678999999999999999988764

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.7e-35  Score=214.04  Aligned_cols=189  Identities=19%  Similarity=0.303  Sum_probs=163.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ++|++++|+|++++|++++.||.|++||..+++....+..  +...|.+++|+|++..+++ ++.|+.+++|++....  
T Consensus        65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~--~~~~v~~~~~sp~g~~las-g~~d~~i~v~~~~~~~~~  141 (354)
T 2pbi_B           65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM--PCTWVMACAYAPSGCAIAC-GGLDNKCSVYPLTFDKNE  141 (354)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--SSSCCCEEEECTTSSEEEE-ESTTSEEEEEECCCCTTC
T ss_pred             CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec--CCCCEEEEEECCCCCEEEE-eeCCCCEEEEEEeccccc
Confidence            5799999999999999999999999999988876555543  4667999999999998876 5799999999986432  


Q ss_pred             ------Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc--CCCEEEEeecCC
Q psy8758          80 ------SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDK  140 (198)
Q Consensus        80 ------~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~d~  140 (198)
                            ..+..|.           +..+++++.|++|++||+++ ++.+..+.+|...+.+++|+|  ++++|++++.|+
T Consensus       142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg  220 (354)
T 2pbi_B          142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK  220 (354)
T ss_dssp             CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred             cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence                  1122232           34689999999999999998 788889999999999999988  478999999999


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .|++||+++++++..+ .+|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus       221 ~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~  274 (354)
T 2pbi_B          221 KAMVWDMRSGQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE  274 (354)
T ss_dssp             CEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred             eEEEEECCCCcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence            9999999999988776 68889999999999999999999999999999987754

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1e-36  Score=225.89  Aligned_cols=191  Identities=14%  Similarity=0.179  Sum_probs=157.6

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|++++|+| ++++||+|+.||.|+|||+.+++....+....|...|.+++|+|. +..|+ +++.|++|++||++...
T Consensus       120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~-s~s~D~~v~iwd~~~~~  198 (435)
T 4e54_B          120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY-ASSMEGTTRLQDFKGNI  198 (435)
T ss_dssp             SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE-EECSSSCEEEEETTSCE
T ss_pred             CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE-EEeCCCEEEEeeccCCc
Confidence            3599999999 567999999999999999987765555554557889999999995 55555 56799999999987542


Q ss_pred             Cc--------------ccc-ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEE
Q psy8758          80 SP--------------LNV-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLR  143 (198)
Q Consensus        80 ~~--------------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~  143 (198)
                      ..              +.. ..+.++++++.|+.|++||++.  +.+..+..|...|.+++|+|+++ ++++++.|+.|+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~  276 (435)
T 4e54_B          199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK  276 (435)
T ss_dssp             EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred             eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence            11              111 2345799999999999999974  66778889999999999999986 788999999999


Q ss_pred             EEEcCCCceeeEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         144 LYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       144 v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +||+++.+....+  ..+|...|.+++|+|+|++|++++.||.|++||+.+++.
T Consensus       277 iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~  330 (435)
T 4e54_B          277 IWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC  330 (435)
T ss_dssp             EEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred             EEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence            9999886654332  357889999999999999999999999999999998764

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=213.15  Aligned_cols=188  Identities=15%  Similarity=0.282  Sum_probs=155.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee-eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR-KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      .|.+++|+|+|++|++++.|+.|+|||+.++....... ...|...|.+++|+|+++++++ ++.|+.+++|+.....  
T Consensus        18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s-~s~D~~v~iw~~~~~~~~   96 (345)
T 3fm0_A           18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS-ASFDATTCIWKKNQDDFE   96 (345)
T ss_dssp             CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEE-EETTSCEEEEEECCC-EE
T ss_pred             cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEE-EECCCcEEEEEccCCCeE
Confidence            68999999999999999999999999998765332221 2236788999999999998876 5699999999987542  


Q ss_pred             --Ccccccc-----------CceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          80 --SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        80 --~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                        ..+..|.           +..+++++.|+.|++||++...  ..+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus        97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~  176 (345)
T 3fm0_A           97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL  176 (345)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred             EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence              2233333           3579999999999999998632  235667789999999999999999999999999999


Q ss_pred             EEcCCCceee-EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         145 YLAHQGHSRD-IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       145 ~d~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ||.+++.... ....+|...|.+++|+|+|++|++++.|++|++|+..
T Consensus       177 w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~  224 (345)
T 3fm0_A          177 YREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY  224 (345)
T ss_dssp             EEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             EEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence            9998876432 2236899999999999999999999999999999974

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=2.7e-35  Score=213.79  Aligned_cols=185  Identities=15%  Similarity=0.034  Sum_probs=148.0

Q ss_pred             ceeEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .+.+++|||||++++++  +.|+.|+|||+.+++....+   .+...|.+++|+|++++++++ + ++.+.+|+..+...
T Consensus       135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~---~~~~~V~~v~fspdg~~l~s~-s-~~~~~~~~~~~~~~  209 (365)
T 4h5i_A          135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI---ETRGEVKDLHFSTDGKVVAYI-T-GSSLEVISTVTGSC  209 (365)
T ss_dssp             CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE---ECSSCCCEEEECTTSSEEEEE-C-SSCEEEEETTTCCE
T ss_pred             CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe---CCCCceEEEEEccCCceEEec-c-ceeEEEEEeccCcc
Confidence            37789999999987654  47899999999988765554   356789999999999998764 4 55666666654332


Q ss_pred             c----cccc-----------cCceEEEecCCC----cEEEEEccCCCc---ceeeecCCCcceEEEEEccCCCEEEEeec
Q psy8758          81 P----LNVH-----------KDMTSAAANEDF----NLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        81 ~----~~~~-----------~~~~~~~~~~~~----~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      .    ...|           .+..+++++.++    .++.|++.....   ....+..|...|++++|+|+|++||+|+.
T Consensus       210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~  289 (365)
T 4h5i_A          210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN  289 (365)
T ss_dssp             EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred             eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence            1    1112           234567776665    578898876322   23456788999999999999999999999


Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |++|+|||+++++++..+..+|...|++++|+|||++||+++.|++|+||++..
T Consensus       290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            999999999999998887788999999999999999999999999999999964

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6.1e-35  Score=209.24  Aligned_cols=192  Identities=19%  Similarity=0.233  Sum_probs=150.0

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccCCceee--eeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLG--PIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|++++|+|+ +++|++|+.|++|++||+.+.+...  ..... .|...|.+++|+|++++++++ +.|+.|++|+...
T Consensus        39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~  117 (340)
T 4aow_A           39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTT  117 (340)
T ss_dssp             SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT
T ss_pred             CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE-cccccceEEeecc
Confidence            57999999997 6899999999999999997654322  12222 267889999999999988764 6899999988753


Q ss_pred             CCCc---------------------------------------------cccc-------------cCceEEEecCCCcE
Q psy8758          78 LNSP---------------------------------------------LNVH-------------KDMTSAAANEDFNL   99 (198)
Q Consensus        78 ~~~~---------------------------------------------~~~~-------------~~~~~~~~~~~~~i   99 (198)
                      ....                                             ...|             ...++++++.|+.|
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i  197 (340)
T 4aow_A          118 GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLV  197 (340)
T ss_dssp             TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred             cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEE
Confidence            2210                                             0001             11247788999999


Q ss_pred             EEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe----------------------
Q psy8758         100 YSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH----------------------  157 (198)
Q Consensus       100 ~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~----------------------  157 (198)
                      ++||+++ .+.+..+.+|...|++++|+|++++|++++.|+.|++||+++.+.+..+.                      
T Consensus       198 ~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d  276 (340)
T 4aow_A          198 KVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG  276 (340)
T ss_dssp             EEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred             EEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCC
Confidence            9999998 67888888999999999999999999999999999999988654332220                      


Q ss_pred             --------------------------ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         158 --------------------------TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       158 --------------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                                                .+|...|++++|+|+|++|++++.||.|++||+++|++
T Consensus       277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr  340 (340)
T 4aow_A          277 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR  340 (340)
T ss_dssp             TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred             CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence                                      13566799999999999999999999999999999863

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=4.4e-35  Score=214.53  Aligned_cols=189  Identities=15%  Similarity=0.268  Sum_probs=157.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .|.+++|+|+|++|++++.|+.|++||+.+++....+..  |...|.+++|+|+++.+++ ++.|+.|++||+++.....
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s-~s~d~~v~iwd~~~~~~~~  201 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG--HEQDIYSLDYFPSGDKLVS-GSGDRTVRIWDLRTGQCSL  201 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTTEEEE
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc--CCCCEEEEEEcCCCCEEEE-ecCCCcEEEEECCCCeeEE
Confidence            388999999999999999999999999998876655544  5778999999999998876 5699999999998654211


Q ss_pred             -------------ccccCceEEEecCCCcEEEEEccCCCcceeee-------cCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          83 -------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-------KDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        83 -------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                                   ....+..+++++.|+.|++||+++ +..+..+       .+|...|.+++|+|++++|++++.|+.|
T Consensus       202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v  280 (393)
T 1erj_A          202 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV  280 (393)
T ss_dssp             EEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             EEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence                         112456899999999999999987 5555554       5688999999999999999999999999


Q ss_pred             EEEEcCCCc------------eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGH------------SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++||+++..            +... ..+|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus       281 ~~wd~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~  345 (393)
T 1erj_A          281 KLWNLQNANNKSDSKTPNSGTCEVT-YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL  345 (393)
T ss_dssp             EEEEC---------------CEEEE-EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEEECCCCCCcccccCCCCCcceEE-EecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence            999997643            2222 3578899999999999999999999999999999988764

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.5e-34  Score=204.46  Aligned_cols=188  Identities=13%  Similarity=0.234  Sum_probs=151.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|++++|+|+|++|++|+.|+.|++||+...  +....+..  |...|.+++|+|+  ++.+++ ++.|++|++||+++
T Consensus        10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g--H~~~V~~v~~s~~~~g~~l~s-~s~D~~v~iWd~~~   86 (297)
T 2pm7_B           10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILAS-CSYDGKVMIWKEEN   86 (297)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEE-EETTTEEEEEEBSS
T ss_pred             CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc--ccCCeEEEEecCCCcCCEEEE-EcCCCEEEEEEcCC
Confidence            57999999999999999999999999999753  33334433  6888999999864  666655 67999999999976


Q ss_pred             CC--C--ccccc----------c---CceEEEecCCCcEEEEEccCCCc-ceeeecCCCcceEEEEEccC----------
Q psy8758          78 LN--S--PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNS-PLNVHKDMTSAVTSVDYSPT----------  129 (198)
Q Consensus        78 ~~--~--~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~sp~----------  129 (198)
                      ..  .  .+..|          +   +..+++++.|+.|++||++.... ....+.+|...+.+++|+|+          
T Consensus        87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~  166 (297)
T 2pm7_B           87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG  166 (297)
T ss_dssp             SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred             CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence            42  1  11222          1   45799999999999999987322 24566789999999999997          


Q ss_pred             ---CCEEEEeecCCcEEEEEcCCCc----eeeEEeccCcccEEEEEEcCCC---CEEEEecCCCeEEEEecCCC
Q psy8758         130 ---GREFVAGGYDKSLRLYLAHQGH----SRDIYHTKRMQHVTHTVWSLDN---KFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       130 ---~~~l~~~~~d~~v~v~d~~~~~----~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~v~~w~~~~~  193 (198)
                         +++|++++.|+.|++||+++++    ....+ .+|...|.+++|+|++   ++|++++.|++|++||++++
T Consensus       167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~  239 (297)
T 2pm7_B          167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE  239 (297)
T ss_dssp             ---CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred             CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence               5799999999999999998865    33333 6899999999999985   79999999999999999864

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=2.1e-34  Score=205.57  Aligned_cols=191  Identities=18%  Similarity=0.227  Sum_probs=159.9

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCce--eeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK--LGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|++++|+|++ ++|++++.|++|++|++.....  ...+..+ .|...|.+++|+|+++++++ ++.|+.|++||+++
T Consensus        18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s-~s~D~~v~~wd~~~   96 (319)
T 3frx_A           18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALS-ASWDKTLRLWDVAT   96 (319)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTT
T ss_pred             ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEE-EeCCCEEEEEECCC
Confidence            579999999965 8999999999999999864321  1222222 26788999999999999877 46999999999986


Q ss_pred             CCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC------CCEEEEeec
Q psy8758          78 LNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT------GREFVAGGY  138 (198)
Q Consensus        78 ~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~------~~~l~~~~~  138 (198)
                      ...  .+..|.           +..+++++.|++|++||++.  ..+..+.+|...+.+++|+|.      +..+++++.
T Consensus        97 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~  174 (319)
T 3frx_A           97 GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN  174 (319)
T ss_dssp             TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC------CCEEEEEET
T ss_pred             CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC
Confidence            542  233343           34689999999999999974  677888899999999999995      448999999


Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+.|++||+++.+....+ .+|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus       175 d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~  231 (319)
T 3frx_A          175 DKMVKAWNLNQFQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM  231 (319)
T ss_dssp             TSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred             CCEEEEEECCcchhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            999999999998877766 689999999999999999999999999999999988764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=4.2e-34  Score=205.64  Aligned_cols=192  Identities=15%  Similarity=0.219  Sum_probs=157.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|.+++|+|+++++++++.|+.+++|++.+++.. ..... ..|...+.++.|+|++. +++ ++.|+.|++||+++..
T Consensus        98 ~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s-~s~d~~i~~wd~~~~~  175 (340)
T 1got_B           98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT-SSGDTTCALWDIETGQ  175 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEE-EETTSCEEEEETTTTE
T ss_pred             ccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEE-EECCCcEEEEECCCCc
Confidence            35889999999999999999999999999865421 11111 23678899999998875 444 5789999999997654


Q ss_pred             C--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          80 S--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 ~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                      .  .+..|.           +..+++++.|+.|++||+++ +.....+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus       176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd  254 (340)
T 1got_B          176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD  254 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence            2  223332           34689999999999999998 678888999999999999999999999999999999999


Q ss_pred             cCCCceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++++.+..+. ..+...|.+++|+|+|++|++++.||.|++||+.+++.+
T Consensus       255 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~  305 (340)
T 1got_B          255 LRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA  305 (340)
T ss_dssp             TTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             CCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence            99988776652 223357999999999999999999999999999887654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-35  Score=216.88  Aligned_cols=193  Identities=14%  Similarity=0.168  Sum_probs=161.1

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccC---CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc-
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHA---SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR-   76 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-   76 (198)
                      ++|++++|+| ++++|++|+.||.|++||+.+   +..........|...|.+++|+|++..+++ ++.|+.|++||+. 
T Consensus        64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~s~dg~i~vwd~~~  142 (437)
T 3gre_A           64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAV-SSKDGQIIVLKVNH  142 (437)
T ss_dssp             SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEE-EETTSEEEEEEEEE
T ss_pred             CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEE-EeCCCEEEEEEecc
Confidence            5799999999 999999999999999999976   443333333357889999999999988876 4699999999985 


Q ss_pred             --CCCC----------cccc-----------------ccCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEE
Q psy8758          77 --QLNS----------PLNV-----------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVD  125 (198)
Q Consensus        77 --~~~~----------~~~~-----------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~  125 (198)
                        ....          .+..                 ..+..+++++.|+.|++||+++ .+++..+..  |...|++++
T Consensus       143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~  221 (437)
T 3gre_A          143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT-LERLQIIENSPRHGAVSSIC  221 (437)
T ss_dssp             EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT-CCEEEEEECCGGGCCEEEEE
T ss_pred             ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CeeeEEEccCCCCCceEEEE
Confidence              2110          1111                 2256899999999999999998 677888877  889999999


Q ss_pred             EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEc----CCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS----LDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+|++++|++++.|+.|++||+++++.+..+...|...|.+++|+    |++++|++++.||.|++||+++++++
T Consensus       222 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~  296 (437)
T 3gre_A          222 IDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ  296 (437)
T ss_dssp             ECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE
T ss_pred             ECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE
Confidence            999999999999999999999999998887755777899999665    46789999999999999999988753

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=5.1e-34  Score=201.68  Aligned_cols=189  Identities=15%  Similarity=0.229  Sum_probs=149.9

Q ss_pred             cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|.+++|+|+  +++|++++.|++|++||+.+++.........|...|.+++|+|+  +..+++ ++.|+.|++||++.
T Consensus        54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s-~s~d~~v~~wd~~~  132 (297)
T 2pm7_B           54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV-ASSDGKVSVVEFKE  132 (297)
T ss_dssp             SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEEBCS
T ss_pred             CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE-EECCCcEEEEEecC
Confidence            57999999874  89999999999999999987642222222236778999999997  666665 57999999999976


Q ss_pred             CCC----cccccc------------------------CceEEEecCCCcEEEEEccCCCc---ceeeecCCCcceEEEEE
Q psy8758          78 LNS----PLNVHK------------------------DMTSAAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        78 ~~~----~~~~~~------------------------~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~  126 (198)
                      ...    .+..|.                        ...+++++.|+.|++||++....   ....+.+|...|.+++|
T Consensus       133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~  212 (297)
T 2pm7_B          133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW  212 (297)
T ss_dssp             SSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred             CCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence            421    122221                        24799999999999999987322   45677889999999999


Q ss_pred             ccCC---CEEEEeecCCcEEEEEcCCCce--eeEEe--ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         127 SPTG---REFVAGGYDKSLRLYLAHQGHS--RDIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       127 sp~~---~~l~~~~~d~~v~v~d~~~~~~--~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +|++   ++|++++.|++|++||++....  .....  ..|...|.+++|+|++++|++++.||.|++|+..
T Consensus       213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred             CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence            9995   7999999999999999987532  12221  4567899999999999999999999999999986

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=6.8e-34  Score=205.62  Aligned_cols=183  Identities=19%  Similarity=0.273  Sum_probs=153.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|.+++|+|+++.|++++.|++|++||+.+++....+..  |...|.+++|+|+  +..+++ |+.|+.|++||+++..
T Consensus       155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~g~~l~s-gs~Dg~v~~wd~~~~~  231 (354)
T 2pbi_B          155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFVS-GGCDKKAMVWDMRSGQ  231 (354)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECCCSSCCEEEE-EETTSCEEEEETTTCC
T ss_pred             CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC--CCCCeEEEEEEeCCCCCEEEE-EeCCCeEEEEECCCCc
Confidence            4688999999999999999999999999999887666654  5778999999885  456654 6799999999998654


Q ss_pred             C--ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          80 S--PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        80 ~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                      .  .+..|           .+..+++++.|++|++||++. ...+..+..  +...+.+++|+|++++|++++.|+.|++
T Consensus       232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~v  310 (354)
T 2pbi_B          232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV  310 (354)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEE
Confidence            2  22223           235799999999999999987 455555443  3347899999999999999999999999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ||+.+++.+..+ .+|...|.+++|+|+|++|++++.|+.|++|+
T Consensus       311 wd~~~~~~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          311 WDVLKGSRVSIL-FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EETTTCSEEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EECCCCceEEEE-ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            999999887766 68999999999999999999999999999996

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.8e-34  Score=204.71  Aligned_cols=189  Identities=13%  Similarity=0.162  Sum_probs=149.3

Q ss_pred             cceeEEEECC--CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|.+++|+|  ++++|++++.|++|++||+.+++.........|...|.+++|+|+  +..++ +++.|+.|++||++.
T Consensus        58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~la-sgs~D~~i~lwd~~~  136 (316)
T 3bg1_A           58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILA-CGSSDGAISLLTYTG  136 (316)
T ss_dssp             SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEE-EECSSSCEEEEEECS
T ss_pred             ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEE-EEcCCCCEEEEecCC
Confidence            5799999986  489999999999999999987642222222236788999999998  55555 567999999999875


Q ss_pred             CC-----Ccccccc----------------------------CceEEEecCCCcEEEEEccCCC--cceeeecCCCcceE
Q psy8758          78 LN-----SPLNVHK----------------------------DMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVT  122 (198)
Q Consensus        78 ~~-----~~~~~~~----------------------------~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~  122 (198)
                      ..     ..+..|.                            ...+++++.|+.|++||++...  .++..+.+|...|.
T Consensus       137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~  216 (316)
T 3bg1_A          137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVR  216 (316)
T ss_dssp             SSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEE
T ss_pred             CCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceE
Confidence            42     1112221                            2478999999999999997522  35667889999999


Q ss_pred             EEEEccCC----CEEEEeecCCcEEEEEcCCC---ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         123 SVDYSPTG----REFVAGGYDKSLRLYLAHQG---HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       123 ~~~~sp~~----~~l~~~~~d~~v~v~d~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +++|+|++    ++|++++.|++|++|++.+.   .........|...|.+++|+|++++|++++.|+.|++|+..
T Consensus       217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             EEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             EEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            99999986    78999999999999999863   21112224677899999999999999999999999999986

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.6e-33  Score=201.79  Aligned_cols=193  Identities=17%  Similarity=0.236  Sum_probs=154.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeeee-eecCceeeEEeCC--CCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRKV-VMSLRSNMVSWNP--MEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|++++|+|++++|++++.||.|++||+.++... ...... .|...|.+++|+|  ++..+++ ++.|+.|++||++.
T Consensus        12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s-~~~dg~v~vwd~~~   90 (351)
T 3f3f_A           12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIAS-ASYDKTVKLWEEDP   90 (351)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEE-EETTSCEEEEEECT
T ss_pred             cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEE-EcCCCeEEEEecCC
Confidence            57999999999999999999999999999866422 122222 3678899999999  5777766 56899999999976


Q ss_pred             CCC-----------ccccc----------c---CceEEEecCCCcEEEEEccCCCc------------------------
Q psy8758          78 LNS-----------PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNS------------------------  109 (198)
Q Consensus        78 ~~~-----------~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~------------------------  109 (198)
                      ...           .+..|          +   +..+++++.|+.|++||+++...                        
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (351)
T 3f3f_A           91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD  170 (351)
T ss_dssp             TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred             CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence            421           11111          1   45799999999999999875210                        


Q ss_pred             -----------------------------------ceeeecCCCcceEEEEEccCC----CEEEEeecCCcEEEEEcCCC
Q psy8758         110 -----------------------------------PLNVHKDMTSAVTSVDYSPTG----REFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus       110 -----------------------------------~~~~~~~~~~~i~~~~~sp~~----~~l~~~~~d~~v~v~d~~~~  150 (198)
                                                         .+..+..|...|++++|+|++    ++|++++.|+.|++||++.+
T Consensus       171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~  250 (351)
T 3f3f_A          171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK  250 (351)
T ss_dssp             EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred             eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence                                               134456788899999999998    89999999999999999875


Q ss_pred             ----------------------------------------------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCe
Q psy8758         151 ----------------------------------------------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN  184 (198)
Q Consensus       151 ----------------------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  184 (198)
                                                                    +.+..+ .+|...|++++|+|++++|++++.||.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~dg~  329 (351)
T 3f3f_A          251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-DDHNGEVWSVSWNLTGTILSSAGDDGK  329 (351)
T ss_dssp             C---------------------------------------CCSEEEEEEEEE-CTTSSCEEEEEECSSSCCEEEEETTSC
T ss_pred             cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE-ecccccEEEEEEcCCCCEEEEecCCCc
Confidence                                                          233333 578899999999999999999999999


Q ss_pred             EEEEecCCCccc
Q psy8758         185 LRVWKAHASEKL  196 (198)
Q Consensus       185 v~~w~~~~~~~~  196 (198)
                      |++|++.+++.+
T Consensus       330 v~iw~~~~~~~~  341 (351)
T 3f3f_A          330 VRLWKATYSNEF  341 (351)
T ss_dssp             EEEEEECTTSCE
T ss_pred             EEEEecCcCcch
Confidence            999999988654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=3.5e-34  Score=207.33  Aligned_cols=191  Identities=22%  Similarity=0.272  Sum_probs=149.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeee--eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGP--IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ..|.+++|+|+++++ +++.||.|++||+.+++....  +....|...|.+++|+|+++.+++ ++.|+.|++||+++..
T Consensus        95 ~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s-gs~dg~v~iwd~~~~~  172 (357)
T 4g56_B           95 AGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS-GGKDFSVKVWDLSQKA  172 (357)
T ss_dssp             SCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEE-EETTSCEEEEETTTTE
T ss_pred             CCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEE-EeCCCeEEEEECCCCc
Confidence            358999999998755 577899999999988764432  233347888999999999999876 5699999999998654


Q ss_pred             C--ccccc------------cCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCC-CEEEEeecCCcE
Q psy8758          80 S--PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTG-REFVAGGYDKSL  142 (198)
Q Consensus        80 ~--~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~-~~l~~~~~d~~v  142 (198)
                      .  .+..|            .+.++++++.|+.|++||+++ .++...+  ..+...+.+++|+|++ .+|++++.|+.|
T Consensus       173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i  251 (357)
T 4g56_B          173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK-PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNV  251 (357)
T ss_dssp             EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS-SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCE
T ss_pred             EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC-CceeeeeeeccccccccchhhhhcccceEEEeecccce
Confidence            2  22222            234689999999999999998 4554443  4567789999999984 688999999999


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++||+++++....+ .+|...|++++|+|++ ++|++++.|++|++||+++++.+
T Consensus       252 ~~wd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~  305 (357)
T 4g56_B          252 SLVNIKNPDSAQTS-AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF  305 (357)
T ss_dssp             EEEESSCGGGCEEE-CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred             eEEECCCCcEeEEE-eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence            99999999888776 6888999999999987 57999999999999999998765

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-33  Score=203.27  Aligned_cols=191  Identities=16%  Similarity=0.248  Sum_probs=152.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|.+++|+|++++|++++.|+.+++|++..+..........|...|.+++|+|+++.+++ ++.|+.|++||++.... 
T Consensus        62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s-~s~D~~v~iwd~~~~~~~  140 (345)
T 3fm0_A           62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLAT-CSRDKSVWVWEVDEEDEY  140 (345)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEE-EETTSCEEEEEECTTSCE
T ss_pred             CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEE-EECCCeEEEEECCCCCCe
Confidence            4699999999999999999999999999976642211111236788999999999998876 56999999999975432 


Q ss_pred             ----ccccc-----------cCceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          81 ----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        81 ----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                          .+..|           .+..+++++.|+.|++||++... .....+.+|...|.+++|+|++++|++++.|++|++
T Consensus       141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~i  220 (345)
T 3fm0_A          141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI  220 (345)
T ss_dssp             EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEE
Confidence                22223           23469999999999999998622 245678899999999999999999999999999999


Q ss_pred             EEcCCC---------------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         145 YLAHQG---------------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       145 ~d~~~~---------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ||....               +++..+...|...|.+++|+|++..|++++.|+.|++|+.+++
T Consensus       221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~  284 (345)
T 3fm0_A          221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN  284 (345)
T ss_dssp             EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred             eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence            997432               1222333347889999999999999999999999999998764

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=5.5e-34  Score=207.92  Aligned_cols=194  Identities=17%  Similarity=0.218  Sum_probs=156.1

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeee---eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRK---VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|.++.|+|++ ..|++++.|+.|++||+.+++....+..   ..|...+.++.|+|.+..++++|+.|+.|++||++.
T Consensus       158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~  237 (380)
T 3iz6_a          158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI  237 (380)
T ss_dssp             SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT
T ss_pred             cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC
Confidence            357788999964 5799999999999999998876655522   236778999999884444455578999999999974


Q ss_pred             CC---Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCC-------cceEEEEEccCCCEEEEe
Q psy8758          78 LN---SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-------SAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        78 ~~---~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~~  136 (198)
                      ..   ..+.+|.           +..+++++.|++|++||+++ +..+..+..+.       ..+++++|+|+|++|+++
T Consensus       238 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g  316 (380)
T 3iz6_a          238 TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG  316 (380)
T ss_dssp             TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE
T ss_pred             CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCEEEEE
Confidence            32   2233332           35699999999999999998 56666654432       248999999999999999


Q ss_pred             ecCCcEEEEEcCCCceeeEE---eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         137 GYDKSLRLYLAHQGHSRDIY---HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       137 ~~d~~v~v~d~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.|+.|++||+..++....+   ..+|...|.+++|+|+|++|++|+.|+.|++|++..++.+
T Consensus       317 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~i  379 (380)
T 3iz6_a          317 YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRKI  379 (380)
T ss_dssp             CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSSC
T ss_pred             ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCccc
Confidence            99999999999998876655   2578899999999999999999999999999999887653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.9e-33  Score=204.95  Aligned_cols=190  Identities=13%  Similarity=0.125  Sum_probs=160.0

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|++++|+|++ ++|++++.||.|++||+.+++....+....|...|.+++|+|+ +..++ +++.|+.|++||++...
T Consensus        74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~  152 (383)
T 3ei3_B           74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLF-VSSIRGATTLRDFSGSV  152 (383)
T ss_dssp             SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEE-EEETTTEEEEEETTSCE
T ss_pred             CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEE-EEeCCCEEEEEECCCCc
Confidence            579999999999 8999999999999999998876666654457889999999994 45555 56799999999997532


Q ss_pred             C-cccc--------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEE
Q psy8758          80 S-PLNV--------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLR  143 (198)
Q Consensus        80 ~-~~~~--------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~  143 (198)
                      . .+..              ..+..+++++.|+.|++||++  ++++..+..|...|.+++|+|+++ +|++++.|+.|+
T Consensus       153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~  230 (383)
T 3ei3_B          153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK  230 (383)
T ss_dssp             EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred             eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence            1 1111              123579999999999999995  578888899999999999999999 999999999999


Q ss_pred             EEEcCC----CceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQ----GHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~----~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+++    +.....+  +|...|.+++|+| ++++|++++.|+.|++||+++++.+
T Consensus       231 iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~  286 (383)
T 3ei3_B          231 LWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP  286 (383)
T ss_dssp             EEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred             EEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence            999998    4455544  6889999999999 9999999999999999999987754

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-33  Score=202.75  Aligned_cols=188  Identities=13%  Similarity=0.235  Sum_probs=149.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|.+++|+|+  +|++++.|+.|++||+..+.  ....+....|...|.+++|+|+++.+++ ++.|+.|++||+....
T Consensus        15 ~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las-~s~D~~v~iw~~~~~~   91 (330)
T 2hes_X           15 EKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAA-GSFDSTVSIWAKEESA   91 (330)
T ss_dssp             SCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEE-EETTSCEEEEEC----
T ss_pred             CceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEE-EeCCCcEEEEEcccCc
Confidence            57999999988  99999999999999997653  2222212126788999999999998876 5699999999985321


Q ss_pred             ---------Ccccccc-----------CceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          80 ---------SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        80 ---------~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                               ..+..|.           +.++++++.|++|++||++...   +.+..+..|...|.+++|+|++++|+++
T Consensus        92 ~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~  171 (330)
T 2hes_X           92 DRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASS  171 (330)
T ss_dssp             ---CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred             CccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEE
Confidence                     1122332           3579999999999999995422   4566778899999999999999999999


Q ss_pred             ecCCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCC--CCEEEEecCCCeEEEEecCCC
Q psy8758         137 GYDKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLD--NKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       137 ~~d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +.|++|++||..++  +++..+ .+|...|.+++|+|+  +.+|++++.|++|++||++++
T Consensus       172 s~D~~i~iW~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~  231 (330)
T 2hes_X          172 SYDDTVRIWKDYDDDWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD  231 (330)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred             cCCCeEEEEECCCCCeeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence            99999999999876  444444 689999999999998  678999999999999998754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=5e-33  Score=200.25  Aligned_cols=186  Identities=17%  Similarity=0.217  Sum_probs=151.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|.+++|+|+++++++++.|+.|++||+.+++....+..  |...|.+++|+|+++.++++ +.|+.|++||+..... 
T Consensus        77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~-~~d~~i~~wd~~~~~~~  153 (343)
T 2xzm_R           77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSA-GAEREIKLWNILGECKF  153 (343)
T ss_dssp             SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEE-ETTSCEEEEESSSCEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEE-cCCCEEEEEeccCCcee
Confidence            4689999999999999999999999999998887666554  57889999999999998775 6899999999863211 


Q ss_pred             ---ccccc----------c-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          81 ---PLNVH----------K-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        81 ---~~~~~----------~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                         ....|          +           ...+++++.|+.|++||..  ......+..|...|.+++|+|+|++|+++
T Consensus       154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sg  231 (343)
T 2xzm_R          154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATG  231 (343)
T ss_dssp             ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEE
Confidence               00011          1           1478999999999999954  46677788999999999999999999999


Q ss_pred             ecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         137 GYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       137 ~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +.|+.|++||+... .....+  .+...|.+++|+|++++++++ .|+.|++|++.+++.
T Consensus       232 s~dg~v~iwd~~~~~~~~~~~--~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~  288 (343)
T 2xzm_R          232 GKDKKLLIWDILNLTYPQREF--DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSK  288 (343)
T ss_dssp             ETTCEEEEEESSCCSSCSEEE--ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCS
T ss_pred             cCCCeEEEEECCCCcccceee--cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCC
Confidence            99999999999543 333333  234679999999999988755 578899999987664

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-33  Score=201.62  Aligned_cols=191  Identities=15%  Similarity=0.255  Sum_probs=146.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc----eeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE----KLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      ++|.+++|+|++++|++++.|+.|++|++....    ....+... .|...|.+++|+|+++++++ ++.|+.|++||++
T Consensus        59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las-~s~D~~v~iwd~~  137 (330)
T 2hes_X           59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLAT-CSRDKSVWIWETD  137 (330)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEE-EETTSCEEEEECC
T ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEE-EeCCCEEEEEecc
Confidence            469999999999999999999999999985321    11112222 26788999999999998876 5699999999995


Q ss_pred             CCC------Ccccccc-----------CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEccC--CCEEEEe
Q psy8758          77 QLN------SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPT--GREFVAG  136 (198)
Q Consensus        77 ~~~------~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~--~~~l~~~  136 (198)
                      ...      ..+..|.           +..+++++.|++|++||++... +++..+.+|...|.+++|+|+  +..|+++
T Consensus       138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~  217 (330)
T 2hes_X          138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG  217 (330)
T ss_dssp             TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE
T ss_pred             CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE
Confidence            321      1223332           3579999999999999987621 567788899999999999998  6789999


Q ss_pred             ecCCcEEEEEcCCC--------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         137 GYDKSLRLYLAHQG--------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       137 ~~d~~v~v~d~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +.|++|++||+..+        .....+...|...|.+++|++++ +|++++.||.|++||..+++
T Consensus       218 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~  282 (330)
T 2hes_X          218 SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE  282 (330)
T ss_dssp             ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred             eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence            99999999999764        22233323488899999999765 78999999999999998763

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.2e-34  Score=210.79  Aligned_cols=189  Identities=15%  Similarity=0.158  Sum_probs=149.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|++++|+|++++|++++.|+.|++||+.++  +....+..  |...|.+++|+|++++++++ +.|+.|++||+.+..
T Consensus        12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~-s~d~~v~vwd~~~~~   88 (377)
T 3dwl_C           12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTC-SQDRNAYVYEKRPDG   88 (377)
T ss_dssp             SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEE-ETTSSEEEC------
T ss_pred             CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEE-eCCCeEEEEEcCCCC
Confidence            57999999999999999999999999999877  44444443  67889999999999988764 689999999998654


Q ss_pred             ---C--ccccc-----------cCceEEEecCCCcEEEEEccCCCc--ceeeecC-CCcceEEEEEccCCCEEEEeecCC
Q psy8758          80 ---S--PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNS--PLNVHKD-MTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        80 ---~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                         .  .+..|           .+..+++++.|+.|++||++....  ....+.. |...|.+++|+|++++|++++.|+
T Consensus        89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~  168 (377)
T 3dwl_C           89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR  168 (377)
T ss_dssp             CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred             ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence               1  12222           234689999999999999987322  4667776 999999999999999999999999


Q ss_pred             cEEEEEcCC------------------CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         141 SLRLYLAHQ------------------GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       141 ~v~v~d~~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .|++||+..                  +++...+  +|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus       169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~  239 (377)
T 3dwl_C          169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ  239 (377)
T ss_dssp             CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred             EEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence            999999963                  2233332  7889999999999999999999999999999998876

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7.2e-34  Score=202.57  Aligned_cols=189  Identities=11%  Similarity=0.163  Sum_probs=150.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|++++|+|+|++|++|+.|+.|++||+.+++.........|...|.+++|+|+  ++.+++ ++.|++|++||+++..
T Consensus        14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s-~s~D~~v~iWd~~~~~   92 (316)
T 3bg1_A           14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILAS-CSYDRKVIIWREENGT   92 (316)
T ss_dssp             CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEE-EETTSCEEEECCSSSC
T ss_pred             CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEE-EECCCEEEEEECCCCc
Confidence            5799999999999999999999999999987643211112236889999999863  666665 5799999999997642


Q ss_pred             C----ccccc----------c---CceEEEecCCCcEEEEEccCCCc--ceeeecCCCcceEEEEEccC-----------
Q psy8758          80 S----PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPT-----------  129 (198)
Q Consensus        80 ~----~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~sp~-----------  129 (198)
                      .    .+..|          +   +.++++++.|+.|++||++....  ....+..|...+.+++|+|+           
T Consensus        93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~  172 (316)
T 3bg1_A           93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPS  172 (316)
T ss_dssp             CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred             ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccc
Confidence            1    11222          1   35799999999999999986322  23455678899999999998           


Q ss_pred             ------CCEEEEeecCCcEEEEEcCCCc---eeeEEeccCcccEEEEEEcCCC----CEEEEecCCCeEEEEecCC
Q psy8758         130 ------GREFVAGGYDKSLRLYLAHQGH---SRDIYHTKRMQHVTHTVWSLDN----KFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       130 ------~~~l~~~~~d~~v~v~d~~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~~w~~~~  192 (198)
                            +++|++++.|+.|++||++...   ....+ .+|...|.+++|+|++    ++|++++.|++|++|++++
T Consensus       173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~  247 (316)
T 3bg1_A          173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD  247 (316)
T ss_dssp             SCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred             ccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence                  4789999999999999997652   33333 6888999999999986    7899999999999999976

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1e-32  Score=196.05  Aligned_cols=187  Identities=18%  Similarity=0.254  Sum_probs=145.3

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--   81 (198)
                      +++|+||+++ +|++| .|++|+|||+.+++....+..+.|...|.+++|+|+++++++ |+.|+.|++||+++.+..  
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s-gs~Dg~v~iw~~~~~~~~~~  104 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTSSAEVQLWDVQQQKRLRN  104 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EETTSEEEEEETTTTEEEEE
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE-EECCCcEEEeecCCceeEEE
Confidence            4679999986 66665 589999999999988777776667888999999999998876 579999999998754311  


Q ss_pred             cccc----------------------------------------------------cCceEEEecCCCcEEEEEccCCCc
Q psy8758          82 LNVH----------------------------------------------------KDMTSAAANEDFNLYSYDIRQLNS  109 (198)
Q Consensus        82 ~~~~----------------------------------------------------~~~~~~~~~~~~~i~~~d~~~~~~  109 (198)
                      +..|                                                    .+..+++++.|+.|++||+++...
T Consensus       105 ~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~  184 (318)
T 4ggc_A          105 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG  184 (318)
T ss_dssp             EECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred             ecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence            1111                                                    112478888889999998764210


Q ss_pred             ---ceee--------------------------------------------ecCCCcceEEEEEccCCCEEEEee--cCC
Q psy8758         110 ---PLNV--------------------------------------------HKDMTSAVTSVDYSPTGREFVAGG--YDK  140 (198)
Q Consensus       110 ---~~~~--------------------------------------------~~~~~~~i~~~~~sp~~~~l~~~~--~d~  140 (198)
                         ....                                            ...+...+..+.|+|+++.+++++  .|+
T Consensus       185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~  264 (318)
T 4ggc_A          185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN  264 (318)
T ss_dssp             BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred             cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCC
Confidence               0000                                            111234567788888888776654  799


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .|++||+++++++..+ .+|.+.|++++|+|+|++|++++.||+|++||+.+.+
T Consensus       265 ~i~iwd~~~~~~~~~l-~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          265 QLVIWKYPTMAKVAEL-KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             CEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             EEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            9999999999998887 6899999999999999999999999999999998764

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=5.9e-32  Score=194.65  Aligned_cols=186  Identities=19%  Similarity=0.265  Sum_probs=148.8

Q ss_pred             cceeEEEE-----CC-CCceEEEeeCCCeEEEEEccCCce----eeeeeee-eecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           2 QHVTHTVW-----SL-DNKFVISASDEMNLRVWKAHASEK----LGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         2 ~~v~~~~~-----s~-~~~~l~~~~~d~~i~i~~~~~~~~----~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      +.|++++|     ++ ++++|++|+.|++|++||+...+.    ....... .|...|.+++|+|++..+++ ++.|+.|
T Consensus        22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s-~s~D~~v  100 (343)
T 2xzm_R           22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS-SSWDKTL  100 (343)
T ss_dssp             SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE-EETTSEE
T ss_pred             hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE-EcCCCcE
Confidence            57999999     77 899999999999999999975431    1112222 36788999999999998876 5799999


Q ss_pred             EEEeccCCCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeee---cCCCcceEEEEEccCC----
Q psy8758          71 YSYDIRQLNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPTG----  130 (198)
Q Consensus        71 ~~~d~~~~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~sp~~----  130 (198)
                      ++||+++...  .+..|.           +..+++++.|+.|++||+..  ......   ..|...+.+++|+|++    
T Consensus       101 ~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  178 (343)
T 2xzm_R          101 RLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--ECKFSSAEKENHSDWVSCVRYSPIMKSAN  178 (343)
T ss_dssp             EEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--CEEEECCTTTSCSSCEEEEEECCCCCSCS
T ss_pred             EEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--CceeeeecccCCCceeeeeeecccccccc
Confidence            9999986542  233333           34689999999999999974  222222   3688899999999987    


Q ss_pred             ------CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         131 ------REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       131 ------~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                            .+|++++.|+.|++||. ..+....+ .+|...|.+++|+|+|++|++++.||.|++||+.+
T Consensus       179 ~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~  244 (343)
T 2xzm_R          179 KVQPFAPYFASVGWDGRLKVWNT-NFQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN  244 (343)
T ss_dssp             CCCSSCCEEEEEETTSEEEEEET-TTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred             ccCCCCCEEEEEcCCCEEEEEcC-CCceeEEE-cCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence                  78999999999999994 44444444 68889999999999999999999999999999954

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.6e-32  Score=201.05  Aligned_cols=188  Identities=12%  Similarity=0.161  Sum_probs=153.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.|.+++|+|++++|++++.|+.|++||+.+++....+.   +...+.+++|+| ++..+++ ++.|+.|++||+++...
T Consensus       166 ~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~-~s~d~~v~iwd~~~~~~  241 (393)
T 1erj_A          166 QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS---IEDGVTTVAVSPGDGKYIAA-GSLDRAVRVWDSETGFL  241 (393)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSTTCCEEEE-EETTSCEEEEETTTCCE
T ss_pred             CCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE---cCCCcEEEEEECCCCCEEEE-EcCCCcEEEEECCCCcE
Confidence            468999999999999999999999999998887544443   466789999999 6666655 67999999999875432


Q ss_pred             c--c-------ccc-----------cCceEEEecCCCcEEEEEccCC-----------CcceeeecCCCcceEEEEEccC
Q psy8758          81 P--L-------NVH-----------KDMTSAAANEDFNLYSYDIRQL-----------NSPLNVHKDMTSAVTSVDYSPT  129 (198)
Q Consensus        81 ~--~-------~~~-----------~~~~~~~~~~~~~i~~~d~~~~-----------~~~~~~~~~~~~~i~~~~~sp~  129 (198)
                      .  +       ..|           .+..+++++.|+.|++||++..           ......+.+|...|.+++|+|+
T Consensus       242 ~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~  321 (393)
T 1erj_A          242 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN  321 (393)
T ss_dssp             EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG
T ss_pred             EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC
Confidence            1  1       122           2356899999999999999752           1234566789999999999999


Q ss_pred             CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC------CCCEEEEecCCCeEEEEecCCCc
Q psy8758         130 GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL------DNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +++|++++.|+.|++||+.+++.+..+ .+|...|.+++|++      ++++|++++.||.|++|+++..+
T Consensus       322 ~~~l~sgs~D~~v~iwd~~~~~~~~~l-~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~  391 (393)
T 1erj_A          322 DEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA  391 (393)
T ss_dssp             GCEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred             CCEEEEEeCCCeEEEEECCCCeEEEEE-CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence            999999999999999999999988776 68999999999986      67899999999999999987643

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=7.3e-33  Score=213.03  Aligned_cols=189  Identities=15%  Similarity=0.250  Sum_probs=154.3

Q ss_pred             cceeEEEECCCCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|.+++|+|+|++|++++.+    +.|++||.  ++....+..  |...|.+++|+|+++..+++++.|+.|++||.+.
T Consensus       104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~g--h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~  179 (611)
T 1nr0_A          104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTG--QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP  179 (611)
T ss_dssp             SCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCC--CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT
T ss_pred             CceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecC--CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC
Confidence            579999999999999988765    46777774  444444443  6788999999999986556678999999999865


Q ss_pred             CC--Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeec-------CCCcceEEEEEccCCCEEEEee
Q psy8758          78 LN--SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHK-------DMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        78 ~~--~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                      .+  ..+..|.           +..+++++.|++|++||+.+ ++.+..+.       +|...|.+++|+|++++|++++
T Consensus       180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s  258 (611)
T 1nr0_A          180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS  258 (611)
T ss_dssp             BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred             CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence            32  2233333           34689999999999999987 56666663       7999999999999999999999


Q ss_pred             cCCcEEEEEcCCCceeeEE------------------------------------------eccCcccEEEEEEcCCCCE
Q psy8758         138 YDKSLRLYLAHQGHSRDIY------------------------------------------HTKRMQHVTHTVWSLDNKF  175 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~------------------------------------------~~~~~~~v~~~~~s~~~~~  175 (198)
                      .|++|++||+.+++....+                                          ..+|...|.+++|+|+|++
T Consensus       259 ~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~  338 (611)
T 1nr0_A          259 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT  338 (611)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE
Confidence            9999999999987654322                                          2468889999999999999


Q ss_pred             EEEecCCCeEEEEecCCCcc
Q psy8758         176 VISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |++++.|+.|++||+.+++.
T Consensus       339 l~s~s~D~~v~~Wd~~~~~~  358 (611)
T 1nr0_A          339 LFSADAEGHINSWDISTGIS  358 (611)
T ss_dssp             EEEEETTSCEEEEETTTCCE
T ss_pred             EEEEeCCCcEEEEECCCCce
Confidence            99999999999999998764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.8e-32  Score=200.64  Aligned_cols=193  Identities=13%  Similarity=0.207  Sum_probs=158.4

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeee-----------eecCceeeEEeCC-CCCeEEEEecCCc
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKV-----------VMSLRSNMVSWNP-MEAFVFTAANEDF   68 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~-~~~~~~~~~~~d~   68 (198)
                      ++|++++|+| ++++|++++.||.|++||+.+++....+...           .|...|.+++|+| ++..++ +++.|+
T Consensus        44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~d~  122 (408)
T 4a11_B           44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT-SSSFDK  122 (408)
T ss_dssp             SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE-EEETTS
T ss_pred             CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE-EEeCCC
Confidence            5799999999 9999999999999999999887654444321           2678899999999 455555 467899


Q ss_pred             cEEEEeccCCCCccc---------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-E
Q psy8758          69 NLYSYDIRQLNSPLN---------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-E  132 (198)
Q Consensus        69 ~i~~~d~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~  132 (198)
                      .|++||+.+......               ......+++++.++.|++||+++ .+.+..+..|...+.+++|+|+++ .
T Consensus       123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l  201 (408)
T 4a11_B          123 TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS-GSCSHILQGHRQEILAVSWSPRYDYI  201 (408)
T ss_dssp             EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS-SCCCEEECCCCSCEEEEEECSSCTTE
T ss_pred             eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC-cceeeeecCCCCcEEEEEECCCCCcE
Confidence            999999986542111               11234799999999999999998 678888889999999999999998 5


Q ss_pred             EEEeecCCcEEEEEcCCCceeeEEe---------------ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         133 FVAGGYDKSLRLYLAHQGHSRDIYH---------------TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~~~~~~~~~~---------------~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++++.|+.|++||++.+.......               ..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus       202 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  280 (408)
T 4a11_B          202 LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT  280 (408)
T ss_dssp             EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred             EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence            8899999999999998765322221               467789999999999999999999999999999987753

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2.3e-33  Score=202.73  Aligned_cols=189  Identities=11%  Similarity=0.173  Sum_probs=155.0

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|.+++|+| ++++|++++.||.|++||+.+++....+.. ..+...|.+++|+|+++.++++ +.|+.|++||+++..
T Consensus       116 ~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~  194 (366)
T 3k26_A          116 NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINSKR  194 (366)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCSHH
T ss_pred             CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEe-cCCCCEEEEECCCCc
Confidence            5799999999 999999999999999999998876665532 2367889999999999988775 689999999997542


Q ss_pred             Ccc--c----------------------------ccc---------CceEEEecCCCcEEEEEccCCCc-----------
Q psy8758          80 SPL--N----------------------------VHK---------DMTSAAANEDFNLYSYDIRQLNS-----------  109 (198)
Q Consensus        80 ~~~--~----------------------------~~~---------~~~~~~~~~~~~i~~~d~~~~~~-----------  109 (198)
                      ...  .                            .|.         +..+++++.|+.|++||+++...           
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~  274 (366)
T 3k26_A          195 MMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN  274 (366)
T ss_dssp             HHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred             cccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence            110  0                            021         45799999999999999987322           


Q ss_pred             --ceeeecCCCcceEEEEEccC--CCEEEEeecCCcEEEEEcCCCceee----EEeccC--cccEEEEEEcCCCCEEEEe
Q psy8758         110 --PLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSRD----IYHTKR--MQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       110 --~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~d~~v~v~d~~~~~~~~----~~~~~~--~~~v~~~~~s~~~~~l~~~  179 (198)
                        .+..+..|...+.+++|+|+  +++|++++.||.|++||+.+++...    .+ ..|  ...|.+++|+|++++|+++
T Consensus       275 ~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~  353 (366)
T 3k26_A          275 VTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL-THHKCGAAIRQTSFSRDSSILIAV  353 (366)
T ss_dssp             EEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE-CCTTCCSCEEEEEECTTSSEEEEE
T ss_pred             hheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE-cccccCCceEEEEeCCCCCeEEEE
Confidence              26667788889999999999  9999999999999999999876432    33 455  6899999999999999999


Q ss_pred             cCCCeEEEEecCC
Q psy8758         180 SDEMNLRVWKAHA  192 (198)
Q Consensus       180 ~~dg~v~~w~~~~  192 (198)
                      +.||.|++||+.+
T Consensus       354 ~~dg~i~iwd~~~  366 (366)
T 3k26_A          354 CDDASIWRWDRLR  366 (366)
T ss_dssp             ETTSEEEEEEC--
T ss_pred             eCCCEEEEEEecC
Confidence            9999999999864

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.4e-32  Score=209.81  Aligned_cols=180  Identities=22%  Similarity=0.334  Sum_probs=152.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~   80 (198)
                      .+|.+++|+|++++|++++.|+.|++||. +++....+..  |...|.+++|+|+++.++++ +.|+.|++||..... .
T Consensus       386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~--~~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~~~~  461 (577)
T 2ymu_A          386 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQLLQ  461 (577)
T ss_dssp             SCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC--CCCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCCEEE
Confidence            46899999999999999999999999996 4554444443  57889999999999988775 689999999975321 1


Q ss_pred             ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      .+..|           .+..+++++.|+.|++||..  ++.+..+.+|...|++++|+|++++|++++.|+.|++||. +
T Consensus       462 ~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~  538 (577)
T 2ymu_A          462 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N  538 (577)
T ss_dssp             EEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred             EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C
Confidence            22222           33568999999999999964  5788899999999999999999999999999999999996 5


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ++.+..+ .+|...|++++|+|||++|++++.|++|++||
T Consensus       539 ~~~~~~~-~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          539 GQLLQTL-TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             SCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            6666665 68999999999999999999999999999997

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2.6e-32  Score=200.98  Aligned_cols=187  Identities=10%  Similarity=0.067  Sum_probs=155.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|++++|+|++++|++++.|+.|++||+.+++....+..  |...|.+++|+|+++.+++ ++.|+.|++||+++....
T Consensus       140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~  216 (420)
T 3vl1_A          140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG--HRATVTDIAIIDRGRNVLS-ASLDGTIRLWECGTGTTI  216 (420)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC--CSSCEEEEEEETTTTEEEE-EETTSCEEEEETTTTEEE
T ss_pred             CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC--CCCcEEEEEEcCCCCEEEE-EcCCCcEEEeECCCCcee
Confidence            5799999999999999999999999999998887666653  5788999999999998886 569999999999754321


Q ss_pred             --ccc-----------------------------------ccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEE
Q psy8758          82 --LNV-----------------------------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTS  123 (198)
Q Consensus        82 --~~~-----------------------------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~  123 (198)
                        +..                                   ..+..+++++.|+.|++||+++ ......+ ..|...+.+
T Consensus       217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~  295 (420)
T 3vl1_A          217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS-KEQTIQLPSKFTCSCNS  295 (420)
T ss_dssp             EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT-CCEEEEECCTTSSCEEE
T ss_pred             EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC-CceeEEcccccCCCcee
Confidence              111                                   1335789999999999999998 4444444 558889999


Q ss_pred             EEEccCCC-EEEEeecCCcEEEEEcCCCce-eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         124 VDYSPTGR-EFVAGGYDKSLRLYLAHQGHS-RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       124 ~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      ++|+|+++ +|++++.|+.|++||+++++. +..+...|...+..+.| +++++|++++.|+.|++|++.+.
T Consensus       296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~  366 (420)
T 3vl1_A          296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP  366 (420)
T ss_dssp             EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred             EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence            99999999 999999999999999998754 55554457788888855 57889999999999999998774

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=5.2e-32  Score=196.19  Aligned_cols=191  Identities=15%  Similarity=0.201  Sum_probs=156.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|++++|+|++++|++++.|+.|++||+.+++  ....+.  .|...|.+++|+|+++.++++ +.|+.|++||++...
T Consensus         9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~   85 (372)
T 1k8k_C            9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTC-GTDRNAYVWTLKGRT   85 (372)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEE-ETTSCEEEEEEETTE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEE-cCCCeEEEEECCCCe
Confidence            579999999999999999999999999998875  444443  367889999999999988775 689999999997653


Q ss_pred             C----ccccc-----------cCceEEEecCCCcEEEEEccCCCc---ceeeecCCCcceEEEEEccCCCEEEEeecCCc
Q psy8758          80 S----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        80 ~----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                      .    .+..|           .+..+++++.|+.+++||++....   .......|...+.+++|+|++++|++++.|+.
T Consensus        86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~  165 (372)
T 1k8k_C           86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK  165 (372)
T ss_dssp             EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred             eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence            1    11112           235789999999999999987322   12233568899999999999999999999999


Q ss_pred             EEEEEcC------------------CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         142 LRLYLAH------------------QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       142 v~v~d~~------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |++||++                  .++....+ ..|...|.+++|+|++++|++++.||.|++||+++++.+
T Consensus       166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  237 (372)
T 1k8k_C          166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV  237 (372)
T ss_dssp             EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred             EEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence            9999964                  45555554 578889999999999999999999999999999988764

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.6e-32  Score=202.32  Aligned_cols=189  Identities=12%  Similarity=0.309  Sum_probs=148.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-----------eeeeeeeeeec------------CceeeEEeCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-----------KLGPIRKVVMS------------LRSNMVSWNPME-   57 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-----------~~~~~~~~~~~------------~~v~~~~~~~~~-   57 (198)
                      +.|++++|+|+|++|++|+.||.|++|++.+++           ....+..  |.            ..|.+++|+|++ 
T Consensus        29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--h~~~~~~~~~~~~~~~V~~l~~~~~~~  106 (447)
T 3dw8_B           29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS--HEPEFDYLKSLEIEEKINKIRWLPQKN  106 (447)
T ss_dssp             GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC--CCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred             CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc--ccccccccccccccCceEEEEEcCCCC
Confidence            579999999999999999999999999998765           2333333  44            779999999998 


Q ss_pred             -CeEEEEecCCccEEEEeccCCCC-----------------------------------------c-ccccc--------
Q psy8758          58 -AFVFTAANEDFNLYSYDIRQLNS-----------------------------------------P-LNVHK--------   86 (198)
Q Consensus        58 -~~~~~~~~~d~~i~~~d~~~~~~-----------------------------------------~-~~~~~--------   86 (198)
                       ..+++ ++.|+.|++||+.....                                         . ...|.        
T Consensus       107 ~~~l~s-~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          107 AAQFLL-STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSEEEE-EECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             cceEEE-eCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence             56665 47899999999864211                                         0 12222        


Q ss_pred             ---CceEEEecCCCcEEEEEccCCCccee-------eecCCCcceEEEEEccCC-CEEEEeecCCcEEEEEcCCCce---
Q psy8758          87 ---DMTSAAANEDFNLYSYDIRQLNSPLN-------VHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHS---  152 (198)
Q Consensus        87 ---~~~~~~~~~~~~i~~~d~~~~~~~~~-------~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v~d~~~~~~---  152 (198)
                         +..++++ .|+.|++||++.....+.       .+..|...|.+++|+|++ ++|++++.|+.|++||+++++.   
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  264 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR  264 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence               2457777 899999999985344444       356789999999999998 8999999999999999999876   


Q ss_pred             -eeEEeccCcc------------cEEEEEEcCCCCEEEEecCCCeEEEEecCC-Cccc
Q psy8758         153 -RDIYHTKRMQ------------HVTHTVWSLDNKFVISASDEMNLRVWKAHA-SEKL  196 (198)
Q Consensus       153 -~~~~~~~~~~------------~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~-~~~~  196 (198)
                       ...+ ..|..            .|.+++|+|++++|++++. +.|++||+++ ++.+
T Consensus       265 ~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~  320 (447)
T 3dw8_B          265 HSKLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV  320 (447)
T ss_dssp             TCEEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS
T ss_pred             eeeEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc
Confidence             4554 45554            8999999999999999998 9999999987 6554

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.9e-31  Score=189.57  Aligned_cols=190  Identities=20%  Similarity=0.360  Sum_probs=155.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..|.+++|+|++++|++++.|+.|++||+.+++....+..  |...|.+++|+|+++.+++ ++.|+.|++||+++... 
T Consensus        66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~  142 (312)
T 4ery_A           66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVKTGKCL  142 (312)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSEEEE-EETTSCEEEEETTTCCEE
T ss_pred             CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCEEE
Confidence            4689999999999999999999999999998887666654  5778999999999998876 56999999999986542 


Q ss_pred             -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                       .+..|           .+..+++++.|+.|++||+++ .+.+..+ ..+...+..++|+|++++|++++.|+.|++||+
T Consensus       143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~  221 (312)
T 4ery_A          143 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY  221 (312)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred             EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence             22222           234689999999999999998 4555554 456678999999999999999999999999999


Q ss_pred             CCCceeeEEeccCccc---EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHTKRMQH---VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++++.+..+ .+|...   +......+++++|++++.||.|++||+++++.+
T Consensus       222 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~  272 (312)
T 4ery_A          222 SKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV  272 (312)
T ss_dssp             TTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred             CCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence            999887776 455433   223333467889999999999999999988764

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.1e-33  Score=208.86  Aligned_cols=188  Identities=13%  Similarity=0.090  Sum_probs=150.3

Q ss_pred             cceeEEEECCC------CceEEEeeCCCeEEEEEccCCcee--------eeeee-eeecCceeeEEeCCCCCeEEEEecC
Q psy8758           2 QHVTHTVWSLD------NKFVISASDEMNLRVWKAHASEKL--------GPIRK-VVMSLRSNMVSWNPMEAFVFTAANE   66 (198)
Q Consensus         2 ~~v~~~~~s~~------~~~l~~~~~d~~i~i~~~~~~~~~--------~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~   66 (198)
                      +.|.+++|+|+      +.+||+++.||+|++||+..+...        ..... ..|...|.+++|+|++ .| ++|+.
T Consensus       208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l-asgs~  285 (524)
T 2j04_B          208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV-VCGFK  285 (524)
T ss_dssp             CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE-EEEET
T ss_pred             CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE-EEEeC
Confidence            46899999997      579999999999999999766421        01111 1256789999999864 54 45789


Q ss_pred             CccEEEEeccCCCCc---ccc------------cc-C-ceEEEecCCCcEEEEEccCCCcceeeecCCCc--ceEEEEEc
Q psy8758          67 DFNLYSYDIRQLNSP---LNV------------HK-D-MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS--AVTSVDYS  127 (198)
Q Consensus        67 d~~i~~~d~~~~~~~---~~~------------~~-~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~s  127 (198)
                      ||+|++||+++...+   +..            .. + .++++++.|++|++||+++ .+....+.+|..  .+.+++|+
T Consensus       286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~fs  364 (524)
T 2j04_B          286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVVYC  364 (524)
T ss_dssp             TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEEEE
T ss_pred             CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccceEeC
Confidence            999999999754211   111            12 2 5789999999999999997 555555655543  57899999


Q ss_pred             cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      |+++.+++++.|++|++||++++.+...+ .+|...|++++|+|++++|++|+.||+|++||+..+
T Consensus       365 p~~~~l~s~~~d~tv~lwd~~~~~~~~~l-~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~  429 (524)
T 2j04_B          365 PQIYSYIYSDGASSLRAVPSRAAFAVHPL-VSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR  429 (524)
T ss_dssp             TTTTEEEEECSSSEEEEEETTCTTCCEEE-EECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred             CCcCeEEEeCCCCcEEEEECcccccceee-ecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence            99999999999999999999998887666 579999999999999999999999999999998654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-31  Score=193.19  Aligned_cols=191  Identities=16%  Similarity=0.222  Sum_probs=158.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++|+|++++|++++.||.|++||+.+++....+..  |...|.+++|+|+++.++++ +.|+.|++||+.+....
T Consensus        33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~  109 (369)
T 3zwl_B           33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKYCVTG-SADYSIKLWDVSNGQCV  109 (369)
T ss_dssp             SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTTEEEEEETTTCCEE
T ss_pred             ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEE
Confidence            5799999999999999999999999999998887666654  57789999999999988775 68999999999865432


Q ss_pred             cc------------cccCceEEEecCC-----CcEEEEEccCCC----------cceeeecCCCc--ceEEEEEccCCCE
Q psy8758          82 LN------------VHKDMTSAAANED-----FNLYSYDIRQLN----------SPLNVHKDMTS--AVTSVDYSPTGRE  132 (198)
Q Consensus        82 ~~------------~~~~~~~~~~~~~-----~~i~~~d~~~~~----------~~~~~~~~~~~--~i~~~~~sp~~~~  132 (198)
                      ..            ...+..+++++.+     +.+.+||+....          .+...+..|..  .+.+++|+|++++
T Consensus       110 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (369)
T 3zwl_B          110 ATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY  189 (369)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred             EEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence            11            1133567888888     999999998632          13444455555  8999999999999


Q ss_pred             EEEeecCCcEEEEEcCC-CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         133 FVAGGYDKSLRLYLAHQ-GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |++++.|+.|++||+++ ++....+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus       190 l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~  253 (369)
T 3zwl_B          190 IIAGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL  253 (369)
T ss_dssp             EEEEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEEEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence            99999999999999998 5655555 678899999999999999999999999999999988764

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=8.5e-32  Score=194.72  Aligned_cols=188  Identities=12%  Similarity=0.080  Sum_probs=149.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|++++|+|+|++|++|+.++ +++|++.+++....   . +...+..+++.++++.++.+++.|+.|++||..+....
T Consensus        20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~   94 (355)
T 3vu4_A           20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS---Q-EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV   94 (355)
T ss_dssp             CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE---E-ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee---e-ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence            5789999999999999998775 78999876543222   1 12347788999999988877888899999998654311


Q ss_pred             cc-----------------------------cccC------------------ceEEE--ecCCCcEEEEEccCCC----
Q psy8758          82 LN-----------------------------VHKD------------------MTSAA--ANEDFNLYSYDIRQLN----  108 (198)
Q Consensus        82 ~~-----------------------------~~~~------------------~~~~~--~~~~~~i~~~d~~~~~----  108 (198)
                      ..                             ....                  ..++.  ++.+|.|++||+++..    
T Consensus        95 ~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~  174 (355)
T 3vu4_A           95 SRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATT  174 (355)
T ss_dssp             EEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------
T ss_pred             EEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccc
Confidence            00                             0000                  12233  6889999999998632    


Q ss_pred             ----------cc-eeeecCCCcceEEEEEccCCCEEEEeecCCc-EEEEEcCCCceeeEEecc-CcccEEEEEEcCCCCE
Q psy8758         109 ----------SP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKS-LRLYLAHQGHSRDIYHTK-RMQHVTHTVWSLDNKF  175 (198)
Q Consensus       109 ----------~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~-v~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~  175 (198)
                                .+ +..+.+|...|.+++|+|+|++|++++.|++ |++||+++++.+..+..+ |...|.+++|+|++++
T Consensus       175 ~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~  254 (355)
T 3vu4_A          175 QDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSK  254 (355)
T ss_dssp             ------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCE
T ss_pred             ccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCE
Confidence                      12 6778899999999999999999999999998 999999999998888545 8899999999999999


Q ss_pred             EEEecCCCeEEEEecCCCc
Q psy8758         176 VISASDEMNLRVWKAHASE  194 (198)
Q Consensus       176 l~~~~~dg~v~~w~~~~~~  194 (198)
                      |++++.|+.|++||++++.
T Consensus       255 l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          255 LAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             EEEEETTCEEEEEESSCCS
T ss_pred             EEEEECCCEEEEEEccCCC
Confidence            9999999999999998654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9e-33  Score=202.99  Aligned_cols=193  Identities=15%  Similarity=0.232  Sum_probs=160.4

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccCCc------eeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASE------KLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      ++|.+++|+|+ +++|++++.|+.|++||+.+++      ....+.. ..+...+.+++|+|++..++++++.|+.|++|
T Consensus       114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw  193 (416)
T 2pm9_A          114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW  193 (416)
T ss_dssp             SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred             cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE
Confidence            57899999998 8999999999999999998775      3222211 23677899999999955555567899999999


Q ss_pred             eccCCCCc--c----------------cccc--CceEEEecCCC---cEEEEEccCCCcceeeec-CCCcceEEEEEcc-
Q psy8758          74 DIRQLNSP--L----------------NVHK--DMTSAAANEDF---NLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSP-  128 (198)
Q Consensus        74 d~~~~~~~--~----------------~~~~--~~~~~~~~~~~---~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp-  128 (198)
                      |+++....  +                ..++  ..++++++.++   .|++||+++...++..+. .|...+.+++|+| 
T Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~  273 (416)
T 2pm9_A          194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQ  273 (416)
T ss_dssp             ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSS
T ss_pred             ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCC
Confidence            99764321  1                1112  24789999998   999999998557777887 8999999999999 


Q ss_pred             CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCcc
Q psy8758         129 TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       129 ~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ++++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++ ++|++++.||.|++||+.+++.
T Consensus       274 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~  340 (416)
T 2pm9_A          274 DEHLLLSSGRDNTVLLWNPESAEQLSQF-PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN  340 (416)
T ss_dssp             CSSCEEEEESSSEEEEECSSSCCEEEEE-ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred             CCCeEEEEeCCCCEEEeeCCCCccceee-cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence            8999999999999999999999888877 5788999999999998 8999999999999999987664

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=4.5e-32  Score=211.33  Aligned_cols=188  Identities=18%  Similarity=0.212  Sum_probs=158.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|.+++|+|++++|++|+.|+.|++||+.+++....+..  |...|.+++|+|+++.+++ ++.|+.|++||...... 
T Consensus       431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s-~s~D~~i~iwd~~~~~~~  507 (694)
T 3dm0_A          431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVS-ASRDRTIKLWNTLGECKY  507 (694)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEE-EETTSCEEEECTTSCEEE
T ss_pred             CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEE-EeCCCEEEEEECCCCcce
Confidence            4689999999999999999999999999998876666544  5788999999999999876 46999999999753211 


Q ss_pred             ----ccccc----------c---CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          81 ----PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        81 ----~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                          ....|          .   ...+++++.|+.|++||+++ .+....+.+|...|++++|+|++++|++++.|+.|+
T Consensus       508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~  586 (694)
T 3dm0_A          508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL  586 (694)
T ss_dssp             EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCE
T ss_pred             eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence                01112          1   24689999999999999998 677888899999999999999999999999999999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+++++.+..+  .+...+.+++|+|++.+|++++ ++.|++||+++++.+
T Consensus       587 iwd~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~  636 (694)
T 3dm0_A          587 LWDLAEGKKLYSL--EANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIV  636 (694)
T ss_dssp             EEETTTTEEEECC--BCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred             EEECCCCceEEEe--cCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCCh
Confidence            9999999887665  3447899999999999888765 567999999987754

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=2e-31  Score=190.55  Aligned_cols=189  Identities=14%  Similarity=0.217  Sum_probs=160.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee---eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      ++|.+++|+|+++++++++ ||.|++|++.+++....+..   ..+...+.+++|+|+++.++++ +.|+.|++||++..
T Consensus        52 ~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~  129 (337)
T 1gxr_A           52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG-GEASTLSIWDLAAP  129 (337)
T ss_dssp             SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE-ESSSEEEEEECCCC
T ss_pred             CceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEEECCCC
Confidence            5789999999999999998 99999999987754433332   2367889999999999988774 68999999999865


Q ss_pred             CC----ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          79 NS----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        79 ~~----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      ..    .+..|           .+..+++++.|+.|++||+++ .+.+..+..|...+.+++|+|++++|++++.|+.|+
T Consensus       130 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~  208 (337)
T 1gxr_A          130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR  208 (337)
T ss_dssp             --EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-CceeeeeecccCceEEEEECCCCCEEEEEecCCcEE
Confidence            42    11122           235688999999999999998 678888888999999999999999999999999999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +||+++++....+  .+...+.+++|+|++++|++++.|+.|++||+++++.
T Consensus       209 ~~d~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~  258 (337)
T 1gxr_A          209 SWDLREGRQLQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK  258 (337)
T ss_dssp             EEETTTTEEEEEE--ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred             EEECCCCceEeee--cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence            9999999887765  4567899999999999999999999999999988764

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=7.9e-32  Score=209.94  Aligned_cols=192  Identities=19%  Similarity=0.240  Sum_probs=156.3

Q ss_pred             cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCcee--eee-eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL--GPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|++++|+|++ ++|++|+.|+.|++|++......  ... ....|...|.+++|+|+++.+++ |+.|+.|++||+.+
T Consensus       383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s-gs~Dg~v~vwd~~~  461 (694)
T 3dm0_A          383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALS-GSWDGELRLWDLAA  461 (694)
T ss_dssp             SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTT
T ss_pred             ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEE-EeCCCcEEEEECCC
Confidence            579999999865 79999999999999999754321  111 12236888999999999998876 56999999999976


Q ss_pred             CCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceee---ecCCCcceEEEEEccCC--CEEEEeecC
Q psy8758          78 LNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNV---HKDMTSAVTSVDYSPTG--REFVAGGYD  139 (198)
Q Consensus        78 ~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~i~~~~~sp~~--~~l~~~~~d  139 (198)
                      ...  .+..|.           +..+++++.|++|++||+.. ......   ..+|...|.+++|+|++  ..+++++.|
T Consensus       462 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d  540 (694)
T 3dm0_A          462 GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD  540 (694)
T ss_dssp             TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred             CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence            542  233343           34689999999999999875 222222   24688899999999987  589999999


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.|++||+++++....+ .+|...|.+++|+|++++|++++.||.|++||+.+++++
T Consensus       541 ~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~  596 (694)
T 3dm0_A          541 KTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL  596 (694)
T ss_dssp             SCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred             CeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence            99999999998887776 689999999999999999999999999999999998765

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.5e-32  Score=203.55  Aligned_cols=193  Identities=14%  Similarity=0.126  Sum_probs=142.7

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      ++|++++|+| ++++|++++.||+|++||+.++..........+...+.+++|+|++..+++ |+.|+.|++||++... 
T Consensus       165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-g~~dg~i~~wd~~~~~~  243 (435)
T 4e54_B          165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVT-GDNVGNVILLNMDGKEL  243 (435)
T ss_dssp             CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEE-ECSSSBEEEEESSSCBC
T ss_pred             CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEE-EeCCCcEeeeccCccee
Confidence            5799999998 689999999999999999976543222222224456789999999998876 5799999999987432 


Q ss_pred             Cccccc------------cCceEEEecCCCcEEEEEccCCCc--ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          80 SPLNVH------------KDMTSAAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        80 ~~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                      ..+..|            ...++++++.|+.|++||+++...  .+....+|...|++++|+|+|++|++++.|+.|++|
T Consensus       244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw  323 (435)
T 4e54_B          244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY  323 (435)
T ss_dssp             CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred             EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence            222233            234688999999999999987322  223335789999999999999999999999999999


Q ss_pred             EcCCCceee------------------------------------------------------------EEeccCcccEE
Q psy8758         146 LAHQGHSRD------------------------------------------------------------IYHTKRMQHVT  165 (198)
Q Consensus       146 d~~~~~~~~------------------------------------------------------------~~~~~~~~~v~  165 (198)
                      |+.++....                                                            .+..+|...|.
T Consensus       324 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~  403 (435)
T 4e54_B          324 SASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGIS  403 (435)
T ss_dssp             ESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCC
T ss_pred             ECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEE
Confidence            987532211                                                            11123445566


Q ss_pred             EE-EEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         166 HT-VWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       166 ~~-~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++ +|+|+|++|++|+ |+.|++|++++++..
T Consensus       404 s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r  434 (435)
T 4e54_B          404 SLNEFNPMGDTLASAM-GYHILIWSQQEARTR  434 (435)
T ss_dssp             CEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred             EEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence            66 6999999999876 889999999998864

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=3.8e-32  Score=198.63  Aligned_cols=190  Identities=12%  Similarity=0.151  Sum_probs=156.0

Q ss_pred             cceeEEEEC----CCCce-EEEeeCCCeEEEEEccC------Cceee-----eeee-----eeecCceeeEEeCCCCCeE
Q psy8758           2 QHVTHTVWS----LDNKF-VISASDEMNLRVWKAHA------SEKLG-----PIRK-----VVMSLRSNMVSWNPMEAFV   60 (198)
Q Consensus         2 ~~v~~~~~s----~~~~~-l~~~~~d~~i~i~~~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~~   60 (198)
                      +.|.+++|+    |++++ |++++.||.|++||+.+      ++...     .+..     ..+...+.+++|+|++ .+
T Consensus       122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l  200 (397)
T 1sq9_A          122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI  200 (397)
T ss_dssp             SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred             CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence            579999999    99999 99999999999999987      55444     4432     3357789999999999 55


Q ss_pred             EEEecCCccEEEEeccCCCC--cccc---c--------------cCceEEEecCC---CcEEEEEccCCCcceeeecC--
Q psy8758          61 FTAANEDFNLYSYDIRQLNS--PLNV---H--------------KDMTSAAANED---FNLYSYDIRQLNSPLNVHKD--  116 (198)
Q Consensus        61 ~~~~~~d~~i~~~d~~~~~~--~~~~---~--------------~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~--  116 (198)
                      + +++.|+.|++||+++...  .+..   |              .+..+++++.|   +.|++||+++ .+++..+..  
T Consensus       201 ~-~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~  278 (397)
T 1sq9_A          201 A-TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPT  278 (397)
T ss_dssp             E-EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC-
T ss_pred             E-EEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCc
Confidence            5 567999999999985432  2222   2              23468899999   9999999998 677888887  


Q ss_pred             -----------CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEec-----cC---------------cccEE
Q psy8758         117 -----------MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-----KR---------------MQHVT  165 (198)
Q Consensus       117 -----------~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-----~~---------------~~~v~  165 (198)
                                 |...+.+++|+|++++|++++.|+.|++||+++++.+..+..     .|               ...|.
T Consensus       279 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~  358 (397)
T 1sq9_A          279 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF  358 (397)
T ss_dssp             -------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred             ccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCcee
Confidence                       899999999999999999999999999999999998887741     55               88999


Q ss_pred             EEEEcCCC----------CEEEEecCCCeEEEEecCCCc
Q psy8758         166 HTVWSLDN----------KFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       166 ~~~~s~~~----------~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +++|+|++          ++|++++.||.|++|++++|+
T Consensus       359 ~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          359 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             EEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             EEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            99999998          799999999999999999874

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=5.8e-31  Score=194.23  Aligned_cols=190  Identities=15%  Similarity=0.258  Sum_probs=149.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee---------------------------------------e
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---------------------------------------V   42 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---------------------------------------~   42 (198)
                      +.|++++|+|+|++|++|+.||.|++||+.+++.+..+..                                       .
T Consensus       148 ~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~  227 (420)
T 4gga_A          148 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS  227 (420)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEec
Confidence            3599999999999999999999999999987765433321                                       1


Q ss_pred             eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc------cccc------------cCceEE--EecCCCcEEEE
Q psy8758          43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP------LNVH------------KDMTSA--AANEDFNLYSY  102 (198)
Q Consensus        43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~------~~~~------------~~~~~~--~~~~~~~i~~~  102 (198)
                      .|...+..+.|+|++..+++. +.|+.+++|+.......      ...|            ...+++  +|+.|+.|++|
T Consensus       228 ~h~~~~~~~~~~~~g~~l~s~-~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw  306 (420)
T 4gga_A          228 GHSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW  306 (420)
T ss_dssp             CCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred             ccccceeeeeecCCCCeeeee-eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence            134556777888888877664 57888888887654321      1111            223344  45689999999


Q ss_pred             EccCCCcceeeecCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758         103 DIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       103 d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      |+.+ +.....+.. ...+.++.|+|+++.+++++  .|+.|++||+.+++++..+ .+|...|++++|+|||++|++++
T Consensus       307 d~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l-~gH~~~V~~l~~spdg~~l~S~s  383 (420)
T 4gga_A          307 NVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGHTSRVLSLTMSPDGATVASAA  383 (420)
T ss_dssp             ETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSCEEEEE
T ss_pred             eCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEe
Confidence            9998 667666664 45688999999999888765  6899999999999998887 78999999999999999999999


Q ss_pred             CCCeEEEEecCCCcc
Q psy8758         181 DEMNLRVWKAHASEK  195 (198)
Q Consensus       181 ~dg~v~~w~~~~~~~  195 (198)
                      .|++|++||+.+.++
T Consensus       384 ~D~tvriWdv~~~~~  398 (420)
T 4gga_A          384 ADETLRLWRCFELDP  398 (420)
T ss_dssp             TTTEEEEECCSCSSC
T ss_pred             cCCeEEEEECCCCCc
Confidence            999999999976543

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=5.3e-32  Score=199.28  Aligned_cols=188  Identities=11%  Similarity=0.135  Sum_probs=155.0

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~   81 (198)
                      +....|+|++++|++++.|+.|++||+.+++....+.  .|...|.+++|+|+++.+++ ++.|+.|++||+++...  .
T Consensus       100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s-~s~d~~i~iwd~~~~~~~~~  176 (420)
T 3vl1_A          100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ--AHVSEITKLKFFPSGEALIS-SSQDMQLKIWSVKDGSNPRT  176 (420)
T ss_dssp             EEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT--SSSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTCCCCEE
T ss_pred             eEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc--cccCccEEEEECCCCCEEEE-EeCCCeEEEEeCCCCcCceE
Confidence            3455789999999999999999999998776544433  36788999999999998876 56999999999986543  2


Q ss_pred             ccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecC---CC---------------------cceEEEEE
Q psy8758          82 LNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MT---------------------SAVTSVDY  126 (198)
Q Consensus        82 ~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~---------------------~~i~~~~~  126 (198)
                      +..|.           +..+++++.|+.|++||+++ ++.+..+..   +.                     ..+.+++|
T Consensus       177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~  255 (420)
T 3vl1_A          177 LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT-GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF  255 (420)
T ss_dssp             EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred             EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence            33333           34689999999999999998 566666653   23                     34455566


Q ss_pred             ccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCcc
Q psy8758         127 SPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|++++|++++.|+.|++||+++++....+...|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus       256 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~  325 (420)
T 3vl1_A          256 GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC  325 (420)
T ss_dssp             SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred             cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence            889999999999999999999999888877677889999999999998 999999999999999998754

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-31  Score=193.82  Aligned_cols=191  Identities=14%  Similarity=0.197  Sum_probs=154.3

Q ss_pred             cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|.+++|+|+  +++|++++.||.|++||+.+++.........+...+.+++|+|+  +..+++ ++.|+.|++||++.
T Consensus        56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~  134 (379)
T 3jrp_A           56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKE  134 (379)
T ss_dssp             SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCT
T ss_pred             CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE-ecCCCcEEEEecCC
Confidence            57999999987  89999999999999999988763222222236788999999999  777776 46999999999986


Q ss_pred             CCCc--------------cccc--------------cCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEE
Q psy8758          78 LNSP--------------LNVH--------------KDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        78 ~~~~--------------~~~~--------------~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~  126 (198)
                      ....              +..+              .+..+++++.|+.|++||++...   .....+..|...|.+++|
T Consensus       135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~  214 (379)
T 3jrp_A          135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW  214 (379)
T ss_dssp             TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred             CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence            5311              1112              25689999999999999998633   234566789999999999


Q ss_pred             ccC---CCEEEEeecCCcEEEEEcCCCceee--EE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         127 SPT---GREFVAGGYDKSLRLYLAHQGHSRD--IY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       127 sp~---~~~l~~~~~d~~v~v~d~~~~~~~~--~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +|+   +++|++++.|+.|++||++++....  ..  ...|...|.+++|+|++++|++++.||.|++|++.++
T Consensus       215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence            999   8999999999999999999874221  11  2347789999999999999999999999999999853

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.5e-31  Score=196.23  Aligned_cols=191  Identities=14%  Similarity=0.255  Sum_probs=155.1

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCc-------eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASE-------KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      ++|++++|+| ++++|++++.||.|++||+.++.       ....+.  .|...|.+++|+|+++.++++++.|+.|++|
T Consensus        82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw  159 (402)
T 2aq5_A           82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNVLLSAGCDNVILVW  159 (402)
T ss_dssp             SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred             CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence            5799999999 99999999999999999998773       233333  2678899999999986455556799999999


Q ss_pred             eccCCCCc--c--cccc-----------CceEEEecCCCcEEEEEccCCCcceeee-cCCCcc-eEEEEEccCCCEEEEe
Q psy8758          74 DIRQLNSP--L--NVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSA-VTSVDYSPTGREFVAG  136 (198)
Q Consensus        74 d~~~~~~~--~--~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~-i~~~~~sp~~~~l~~~  136 (198)
                      |+++....  +  ..|.           +..+++++.|+.|++||+++ ++.+..+ ..|... +.+++|+|++++|+++
T Consensus       160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  238 (402)
T 2aq5_A          160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKILTTG  238 (402)
T ss_dssp             ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred             ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence            99865432  2  2232           34689999999999999998 6777777 677765 8999999999999999


Q ss_pred             ---ecCCcEEEEEcCCCce-eeEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecCCCcc
Q psy8758         137 ---GYDKSLRLYLAHQGHS-RDIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEK  195 (198)
Q Consensus       137 ---~~d~~v~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~~~~~  195 (198)
                         +.|+.|++||+++++. .......|...+..++|+|++++|+ +++.||.|++||+.+++.
T Consensus       239 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~  302 (402)
T 2aq5_A          239 FSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP  302 (402)
T ss_dssp             ECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred             ccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence               7899999999998765 3344346678899999999999886 556799999999998873

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=8.3e-31  Score=187.36  Aligned_cols=190  Identities=16%  Similarity=0.238  Sum_probs=157.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ..|.+++|+|+++++++++.|+.|++||+.+++.........+...+.+++|+|+++.++++ +.|+.|++||+++... 
T Consensus        98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~~~d~~~~~~~  176 (337)
T 1gxr_A           98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLV  176 (337)
T ss_dssp             SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEE
T ss_pred             CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCcee
Confidence            46899999999999999999999999999887633333333367789999999999988764 6899999999976532 


Q ss_pred             -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                       .+..|           .+..+++++.|+.|++||+++ .+.+..+. +...+.+++|+|+++++++++.++.|++||++
T Consensus       177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~  254 (337)
T 1gxr_A          177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE-GRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN  254 (337)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC-CceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence             12222           234688999999999999998 55555553 67889999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++....  ..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus       255 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~  300 (337)
T 1gxr_A          255 KPDKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI  300 (337)
T ss_dssp             SSCEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             CCCeEEE--cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence            9876543  578899999999999999999999999999999988764

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.3e-31  Score=191.59  Aligned_cols=190  Identities=12%  Similarity=0.201  Sum_probs=154.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|++++|+|++++|++++.||.|++|++..+  +....+.  .|...|.+++|+|+  +..+++ ++.|+.|++||+..
T Consensus        12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s-~~~dg~v~iwd~~~   88 (379)
T 3jrp_A           12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILAS-CSYDGKVLIWKEEN   88 (379)
T ss_dssp             CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEE-EETTSCEEEEEEET
T ss_pred             ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec--CCCCcEEEEEeCCCCCCCEEEE-eccCCEEEEEEcCC
Confidence            57999999999999999999999999999743  3223332  36788999999987  777766 56899999999986


Q ss_pred             CC----Cccc----------ccc---CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEcc-----------
Q psy8758          78 LN----SPLN----------VHK---DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSP-----------  128 (198)
Q Consensus        78 ~~----~~~~----------~~~---~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp-----------  128 (198)
                      ..    ..+.          .++   +..+++++.|+.|++||++... .....+..|...+.+++|+|           
T Consensus        89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  168 (379)
T 3jrp_A           89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG  168 (379)
T ss_dssp             TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred             CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence            53    1111          111   4679999999999999998732 33445678999999999999           


Q ss_pred             --CCCEEEEeecCCcEEEEEcCCCceee---EEeccCcccEEEEEEcCC---CCEEEEecCCCeEEEEecCCCc
Q psy8758         129 --TGREFVAGGYDKSLRLYLAHQGHSRD---IYHTKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       129 --~~~~l~~~~~d~~v~v~d~~~~~~~~---~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                        +++++++++.|+.|++||++.+....   ....+|...|.+++|+|+   +++|++++.||.|++||+++++
T Consensus       169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~  242 (379)
T 3jrp_A          169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ  242 (379)
T ss_dssp             -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred             CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence              69999999999999999998765321   123678899999999999   8999999999999999999863

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-32  Score=198.30  Aligned_cols=190  Identities=13%  Similarity=0.274  Sum_probs=156.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC----ceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS----EKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~   76 (198)
                      +.|.+++|+|++++|++++.||.|++|++.+.    +....+.  .|...|.+++|+|+ +..+++ ++.|+.|++||++
T Consensus        68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s-~~~dg~v~iwd~~  144 (416)
T 2pm9_A           68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS--NHSSSVKTVKFNAKQDNVLAS-GGNNGEIFIWDMN  144 (416)
T ss_dssp             SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC--CSSSCCCEEEECSSSTTBEEE-ECSSSCEEBCBTT
T ss_pred             CceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc--CCccceEEEEEcCCCCCEEEE-EcCCCeEEEEECC
Confidence            46899999999999999999999999999872    2333333  36788999999998 566554 6799999999998


Q ss_pred             CCC------Ccc-----cccc------------CceEEEecCCCcEEEEEccCCCcceeeecCC------CcceEEEEEc
Q psy8758          77 QLN------SPL-----NVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDM------TSAVTSVDYS  127 (198)
Q Consensus        77 ~~~------~~~-----~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~s  127 (198)
                      ...      ..+     ..|.            ...+++++.|+.|++||+++ .+.+..+..+      ...+.+++|+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~  223 (416)
T 2pm9_A          145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA-KKEVIHLSYTSPNSGIKQQLSVVEWH  223 (416)
T ss_dssp             TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT-TEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred             CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC-CCcceEEeccccccccCCceEEEEEC
Confidence            664      221     1121            35799999999999999998 6777777665      7889999999


Q ss_pred             cCC-CEEEEeecCC---cEEEEEcCCC-ceeeEEec-cCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         128 PTG-REFVAGGYDK---SLRLYLAHQG-HSRDIYHT-KRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       128 p~~-~~l~~~~~d~---~v~v~d~~~~-~~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |++ .++++++.|+   .|++||++++ .....+ . +|...|.+++|+| ++++|++++.||.|++||+++++++
T Consensus       224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~  298 (416)
T 2pm9_A          224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTL-NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL  298 (416)
T ss_dssp             SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC-CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred             CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe-ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence            997 5899999998   9999999987 444444 4 7889999999999 8999999999999999999988765

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.5e-31  Score=192.61  Aligned_cols=188  Identities=13%  Similarity=0.147  Sum_probs=159.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      +.|.+++|+|++++|++++.|+.|++||+.+++.........+...+.+++|+|+++.++++ +.|+.+++||++.... 
T Consensus        53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~d~~~~~~~  131 (372)
T 1k8k_C           53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG-SGSRVISICYFEQENDW  131 (372)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEETTTTE
T ss_pred             CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEE-eCCCEEEEEEecCCCcc
Confidence            46899999999999999999999999999887655454444567889999999999988775 6899999999986542 


Q ss_pred             ----cc-ccc-----------cCceEEEecCCCcEEEEEcc-----------------CCCcceeeecCCCcceEEEEEc
Q psy8758          81 ----PL-NVH-----------KDMTSAAANEDFNLYSYDIR-----------------QLNSPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        81 ----~~-~~~-----------~~~~~~~~~~~~~i~~~d~~-----------------~~~~~~~~~~~~~~~i~~~~~s  127 (198)
                          .. ..|           .+..+++++.|+.+++||++                 .....+..+..|...+.+++|+
T Consensus       132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  211 (372)
T 1k8k_C          132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS  211 (372)
T ss_dssp             EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred             eeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC
Confidence                11 112           23468999999999999964                 1256777788899999999999


Q ss_pred             cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |++++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus       212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          212 ANGSRVAWVSHDSTVCLADADKKMAVATL-ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             SSSSEEEEEETTTEEEEEEGGGTTEEEEE-ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred             CCCCEEEEEeCCCEEEEEECCCCceeEEE-ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence            99999999999999999999999988877 5777899999999999988887 899999999987

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-31  Score=194.50  Aligned_cols=187  Identities=17%  Similarity=0.332  Sum_probs=161.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .|++++|+|++++|++++.||.|++|| .+++....+..  |...|.+++|+|+++.++++ +.|+.+++||+++...  
T Consensus       110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~  185 (425)
T 1r5m_A          110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF--HRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQ  185 (425)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC--CCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEE
T ss_pred             ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC--CCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEE
Confidence            799999999999999999999999999 45555555543  57789999999999988875 6899999999975431  


Q ss_pred             -------------------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE
Q psy8758          81 -------------------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA  135 (198)
Q Consensus        81 -------------------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~  135 (198)
                                               .+...++..+++++.++.|++||++. .+++..+..|...+.+++|+|++++|++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~  264 (425)
T 1r5m_A          186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNKLLLS  264 (425)
T ss_dssp             EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred             EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCCEEEE
Confidence                                     11223345689999999999999998 6788888899999999999999999999


Q ss_pred             eecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         136 GGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       136 ~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.|+.|++||+++++....+ ..|...|.+++|+|++ ++++++.|+.|++||+++++.+
T Consensus       265 ~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~  323 (425)
T 1r5m_A          265 ASDDGTLRIWHGGNGNSQNCF-YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL  323 (425)
T ss_dssp             EETTSCEEEECSSSBSCSEEE-CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE
T ss_pred             EcCCCEEEEEECCCCccceEe-cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe
Confidence            999999999999998887776 5788999999999999 9999999999999999988764

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.2e-31  Score=195.97  Aligned_cols=191  Identities=14%  Similarity=0.192  Sum_probs=158.8

Q ss_pred             cceeEEEECCC----C---ceEEEeeCCCeEEEEEccCCce-----eeeeeeeee---cCceeeEEeC----CCCCe-EE
Q psy8758           2 QHVTHTVWSLD----N---KFVISASDEMNLRVWKAHASEK-----LGPIRKVVM---SLRSNMVSWN----PMEAF-VF   61 (198)
Q Consensus         2 ~~v~~~~~s~~----~---~~l~~~~~d~~i~i~~~~~~~~-----~~~~~~~~~---~~~v~~~~~~----~~~~~-~~   61 (198)
                      ++|.+++|+|+    +   ++|++++.|+.|++|++.+++.     ...+..+..   ...|.+++|+    |+++. ++
T Consensus        63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~  142 (397)
T 1sq9_A           63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV  142 (397)
T ss_dssp             TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred             CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEE
Confidence            57899999999    9   9999999999999999988765     444443311   3789999999    99998 66


Q ss_pred             EEecCCccEEEEeccC------CCC-------ccc-------cc-----------cCceEEEecCCCcEEEEEccCCCcc
Q psy8758          62 TAANEDFNLYSYDIRQ------LNS-------PLN-------VH-----------KDMTSAAANEDFNLYSYDIRQLNSP  110 (198)
Q Consensus        62 ~~~~~d~~i~~~d~~~------~~~-------~~~-------~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~  110 (198)
                      + ++.|+.|++||++.      ...       .+.       .|           .+ .+++++.|+.|++||+++ .++
T Consensus       143 ~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~  219 (397)
T 1sq9_A          143 A-TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST-LRP  219 (397)
T ss_dssp             E-EETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT-TEE
T ss_pred             E-EeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC-Cce
Confidence            5 57899999999987      322       221       11           23 789999999999999998 678


Q ss_pred             eeeecC---C---CcceEEEEEccCCCEEEEeecC---CcEEEEEcCCCceeeEEecc-------------CcccEEEEE
Q psy8758         111 LNVHKD---M---TSAVTSVDYSPTGREFVAGGYD---KSLRLYLAHQGHSRDIYHTK-------------RMQHVTHTV  168 (198)
Q Consensus       111 ~~~~~~---~---~~~i~~~~~sp~~~~l~~~~~d---~~v~v~d~~~~~~~~~~~~~-------------~~~~v~~~~  168 (198)
                      +..+..   |   ...+.+++|+|++++|++++.|   +.|++||+++++.+..+ ..             |...|.+++
T Consensus       220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~  298 (397)
T 1sq9_A          220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL-SVPTHSSQASLGEFAHSSWVMSLS  298 (397)
T ss_dssp             EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE-CBC--------CCBSBSSCEEEEE
T ss_pred             eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee-ccCcccccccccccccCCcEEEEE
Confidence            888888   8   8999999999999999999999   99999999999888777 45             889999999


Q ss_pred             EcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         169 WSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       169 ~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+|++++|++++.||.|++||+++++.+
T Consensus       299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~  326 (397)
T 1sq9_A          299 FNDSGETLCSAGWDGKLRFWDVKTKERI  326 (397)
T ss_dssp             ECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             ECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence            9999999999999999999999988764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=5.7e-31  Score=200.88  Aligned_cols=185  Identities=22%  Similarity=0.340  Sum_probs=154.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~   80 (198)
                      .+|.+++|+|+++++++++.|+.+++|+. +++....+..  |...|.+++|+|++++++++ +.|+.|++||..... .
T Consensus       345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~--~~~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~~~~~  420 (577)
T 2ymu_A          345 SSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQ  420 (577)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSEEEEECTTCCEEE
T ss_pred             CCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC--CCCCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCCEEE
Confidence            46889999999999999999999999996 4555555443  57789999999999998774 689999999964321 1


Q ss_pred             ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      .+..|           .+..+++++.|+.|++||+.  .+.+..+..|...+.+++|+|++++|++++.|+.|++||. +
T Consensus       421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~  497 (577)
T 2ymu_A          421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N  497 (577)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-T
T ss_pred             EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-C
Confidence            12222           33578999999999999975  4778888899999999999999999999999999999995 5


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ++.+..+ .+|...|++++|+|++++|++++.||.|++||. ++++
T Consensus       498 ~~~~~~~-~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~  541 (577)
T 2ymu_A          498 GQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL  541 (577)
T ss_dssp             SCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCE
T ss_pred             CCEEEEE-eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCE
Confidence            6666665 688999999999999999999999999999996 4544

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-31  Score=196.00  Aligned_cols=192  Identities=15%  Similarity=0.150  Sum_probs=156.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc---eeeeeeee------------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE---KLGPIRKV------------------------------------   42 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~------------------------------------   42 (198)
                      .++.+++|+|+|++++++ .++.|++||+.+++   .+..+...                                    
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            468999999999966655 57799999999887   33333211                                    


Q ss_pred             ----------------eecCceeeEEeCCCCCeEEEEecCCccEEEEecc--CCCCc--cc--cc-----------cCce
Q psy8758          43 ----------------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR--QLNSP--LN--VH-----------KDMT   89 (198)
Q Consensus        43 ----------------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~--~~--~~-----------~~~~   89 (198)
                                      .+...|.+++|+|+++.++++++.|+.|++||+.  .....  +.  .+           .+..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  163 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT  163 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence                            1122589999999999986777899999999998  43321  11  11           2346


Q ss_pred             EEEecCCCcEEEEEccCCCcc----eeeecCCCcceEEEEEccC---CCEEEEeecCCcEEEEEcCCCceeeEEeccCcc
Q psy8758          90 SAAANEDFNLYSYDIRQLNSP----LNVHKDMTSAVTSVDYSPT---GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~i~~~~~sp~---~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                      +++++.++.+++|++.+ ...    ...+.+|...|.+++|+|+   +++|++++.|+.|++||+++++.+..+..+|..
T Consensus       164 l~~~~~~g~v~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~  242 (450)
T 2vdu_B          164 VIIADKFGDVYSIDINS-IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH  242 (450)
T ss_dssp             EEEEETTSEEEEEETTS-CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred             EEEEeCCCcEEEEecCC-cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence            88999999999999987 333    3367789999999999999   999999999999999999999888776678999


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .|.+++|+ ++++|++++.|+.|++||+++++++
T Consensus       243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~  275 (450)
T 2vdu_B          243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL  275 (450)
T ss_dssp             CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred             ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence            99999999 9999999999999999999998864

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.8e-30  Score=193.61  Aligned_cols=186  Identities=17%  Similarity=0.230  Sum_probs=159.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC--CCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP--MEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|.+++|+|++ .+++|+.||.|++||+.+++....+..  |...|.+++|++  ++..+++ ++.|+.|++||++...
T Consensus       163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~~l~s-~s~d~~i~vwd~~~~~  238 (464)
T 3v7d_B          163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG--HNSTVRCLDIVEYKNIKYIVT-GSRDNTLHVWKLPKES  238 (464)
T ss_dssp             SCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEEESSSCEEEEE-EETTSCEEEEECCCCC
T ss_pred             cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC--CCCccEEEEEecCCCCCEEEE-EcCCCcEEEeeCCCCc
Confidence            579999999988 899999999999999998876666554  578899999985  5555554 6799999999998654


Q ss_pred             Cc-------------------------cccc---------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEE
Q psy8758          80 SP-------------------------LNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        80 ~~-------------------------~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  125 (198)
                      ..                         +..|         .+..+++++.|+.|++||+++ .+++..+.+|...+.+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~  317 (464)
T 3v7d_B          239 SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTI  317 (464)
T ss_dssp             CC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEE
T ss_pred             ccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEE
Confidence            21                         1122         234689999999999999998 788888999999999999


Q ss_pred             EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |+|+++++++++.|+.|++||+++++.+..+ .+|...|.+++|+  +++|++++.||.|++||+++++.
T Consensus       318 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~  384 (464)
T 3v7d_B          318 YDHERKRCISASMDTTIRIWDLENGELMYTL-QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR  384 (464)
T ss_dssp             EETTTTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred             EcCCCCEEEEEeCCCcEEEEECCCCcEEEEE-eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence            9999999999999999999999999988877 6888999999997  57999999999999999998764

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=5.6e-32  Score=196.68  Aligned_cols=186  Identities=15%  Similarity=0.189  Sum_probs=142.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      +.|.+++|+|++++|++++.|+.|++||+.+++ .........|...|.+++|+|+++.++++ +.|+.|++||++... 
T Consensus        56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~  134 (377)
T 3dwl_C           56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG-SGARVISVCYFEQEND  134 (377)
T ss_dssp             SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEE-ESSSCEEECCC-----
T ss_pred             ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEE-ecCCeEEEEEECCccc
Confidence            579999999999999999999999999998776 11222222367889999999999988764 689999999998653 


Q ss_pred             ----Ccccc-cc-----------CceEEEecCCCcEEEEEccCC-----------------CcceeeecCCCcceEEEEE
Q psy8758          80 ----SPLNV-HK-----------DMTSAAANEDFNLYSYDIRQL-----------------NSPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        80 ----~~~~~-~~-----------~~~~~~~~~~~~i~~~d~~~~-----------------~~~~~~~~~~~~~i~~~~~  126 (198)
                          ..+.. |.           +..+++++.|+.|++||++..                 ++++..+ .|...|.+++|
T Consensus       135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~  213 (377)
T 3dwl_C          135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF  213 (377)
T ss_dssp             CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred             ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence                22222 32           346899999999999998521                 2344555 88999999999


Q ss_pred             ccCCCEEEEeecCCcEEEEEcCCCce----eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         127 SPTGREFVAGGYDKSLRLYLAHQGHS----RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       127 sp~~~~l~~~~~d~~v~v~d~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +|++++|++++.|+.|++||+.+++.    +..+ .+|...|.+++|+|++++|++++.++.+ +|+..
T Consensus       214 sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          214 SPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV-KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             CTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE-ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             CCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee-cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence            99999999999999999999999887    4444 6788899999999999999998876666 66654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.2e-30  Score=193.16  Aligned_cols=190  Identities=18%  Similarity=0.357  Sum_probs=154.3

Q ss_pred             cceeEEEECCCCc-eEEEeeCCCeEEEEEccCCcee----eeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           2 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKL----GPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~----~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      +.|.+++|+|+++ +|++++.||.|++|++..+...    ...... .|...|.+++|+|++..++++++.|+.|++||+
T Consensus       182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~  261 (430)
T 2xyi_A          182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDT  261 (430)
T ss_dssp             SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred             CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEEC
Confidence            4689999999998 9999999999999999874321    111222 367789999999966666666789999999999


Q ss_pred             cCCC---C--ccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEee
Q psy8758          76 RQLN---S--PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGG  137 (198)
Q Consensus        76 ~~~~---~--~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~  137 (198)
                      +...   .  .+..|            ...++++++.|+.|++||+++...++..+..|...|.+++|+|+++ +|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~  341 (430)
T 2xyi_A          262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG  341 (430)
T ss_dssp             TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred             CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence            8652   1  12222            2236899999999999999986678888999999999999999986 689999


Q ss_pred             cCCcEEEEEcCCC--------------ceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCC
Q psy8758         138 YDKSLRLYLAHQG--------------HSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       138 ~d~~v~v~d~~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~  192 (198)
                      .|+.|++||+...              +.+. ...+|...|.+++|+|+++ +|++++.||.|++|++.+
T Consensus       342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLF-IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEE-ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred             CCCcEEEEeCCCCccccCccccccCCcceEE-EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence            9999999999872              3333 3467888999999999999 899999999999999865

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.8e-30  Score=190.48  Aligned_cols=192  Identities=17%  Similarity=0.231  Sum_probs=150.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee--------------------------------------e-e
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR--------------------------------------K-V   42 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--------------------------------------~-~   42 (198)
                      +.|.+++|+|++++|++++.||.|++||+.+++....+.                                      . .
T Consensus       135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  214 (401)
T 4aez_A          135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQ  214 (401)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred             CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEc
Confidence            468899999999999999999999999987665433221                                      1 1


Q ss_pred             eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc------------cCceEEEec--CCCcEEEEEccC
Q psy8758          43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH------------KDMTSAAAN--EDFNLYSYDIRQ  106 (198)
Q Consensus        43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~------------~~~~~~~~~--~~~~i~~~d~~~  106 (198)
                      .|...|.+++|+|+++.+++ ++.|+.|++||+++....  +..|            ...++++++  .|+.|++||+++
T Consensus       215 ~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~  293 (401)
T 4aez_A          215 GHSSEVCGLAWRSDGLQLAS-GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT  293 (401)
T ss_dssp             CCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred             CCCCCeeEEEEcCCCCEEEE-EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence            25667889999998888876 468999999998764422  1112            234566655  799999999998


Q ss_pred             CCcceeeecCCCcceEEEEEccCCCEEEE--eecCCcEEEEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         107 LNSPLNVHKDMTSAVTSVDYSPTGREFVA--GGYDKSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~d~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                       ++++..+. +...+.+++|+|+++++++  |+.|+.|++||+.+++..... ..+|...|.+++|+|++++|++++.||
T Consensus       294 -~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg  371 (401)
T 4aez_A          294 -GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE  371 (401)
T ss_dssp             -CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS
T ss_pred             -CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence             66776665 5678999999999999998  448999999999997665543 357889999999999999999999999


Q ss_pred             eEEEEecCCCccc
Q psy8758         184 NLRVWKAHASEKL  196 (198)
Q Consensus       184 ~v~~w~~~~~~~~  196 (198)
                      .|++|++.+++.+
T Consensus       372 ~i~iw~~~~~~~~  384 (401)
T 4aez_A          372 NLKFWRVYDGDHV  384 (401)
T ss_dssp             EEEEEECCC----
T ss_pred             cEEEEECCCCccc
Confidence            9999999998865

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-30  Score=190.72  Aligned_cols=188  Identities=15%  Similarity=0.126  Sum_probs=157.8

Q ss_pred             ceeEEEECCCCceE-EEeeCCCeEEEEEcc--CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFV-ISASDEMNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .|.+++|+|++++| ++++.||.|++||+.  +++....+..+.+...+.+++|+|+++.++++ +.++.+++|++....
T Consensus       104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~~g~v~~~~~~~~~  182 (450)
T 2vdu_B          104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIA-DKFGDVYSIDINSIP  182 (450)
T ss_dssp             CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCC
T ss_pred             ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEE-eCCCcEEEEecCCcc
Confidence            59999999999996 889999999999998  77777777665677889999999999998875 689999999986543


Q ss_pred             C------ccccc-----------c---CceEEEecCCCcEEEEEccCCCcceee-ecCCCcceEEEEEccCCCEEEEeec
Q psy8758          80 S------PLNVH-----------K---DMTSAAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        80 ~------~~~~~-----------~---~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      .      .+..|           .   +..+++++.|+.|++||+++ +..+.. +.+|...|.+++|+ ++++|++++.
T Consensus       183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~  260 (450)
T 2vdu_B          183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG  260 (450)
T ss_dssp             CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-STTEEEEEES
T ss_pred             cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CCCEEEEEeC
Confidence            2      22222           2   45899999999999999998 566665 56899999999999 9999999999


Q ss_pred             CCcEEEEEcCCCceeeEEec------------------------cCcccEEEEEEcCCCCEEEEec-CCCeEEEEec--C
Q psy8758         139 DKSLRLYLAHQGHSRDIYHT------------------------KRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKA--H  191 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~------------------------~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~--~  191 (198)
                      |+.|++||+.+++.+..+..                        .....|.+++|+|++++|++++ .|+.|++|++  .
T Consensus       261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~  340 (450)
T 2vdu_B          261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK  340 (450)
T ss_dssp             SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred             CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence            99999999999988776632                        2235689999999999999888 8999999999  5


Q ss_pred             CC
Q psy8758         192 AS  193 (198)
Q Consensus       192 ~~  193 (198)
                      ++
T Consensus       341 ~~  342 (450)
T 2vdu_B          341 QK  342 (450)
T ss_dssp             ST
T ss_pred             CC
Confidence            54

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-31  Score=211.73  Aligned_cols=188  Identities=11%  Similarity=0.154  Sum_probs=152.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|++++|+|++++||+|+.||.|++|+....+...   .+.+...|.+++|+| ++++++ ++.|+.|++||+++....
T Consensus        18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~---~~~~~~~V~~l~fsp-g~~L~S-~s~D~~v~lWd~~~~~~~   92 (902)
T 2oaj_A           18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI---KLEDRSAIKEMRFVK-GIYLVV-INAKDTVYVLSLYSQKVL   92 (902)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE---ECSSCCCEEEEEEET-TTEEEE-EETTCEEEEEETTTCSEE
T ss_pred             CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE---EcCCCCCEEEEEEcC-CCEEEE-EECcCeEEEEECCCCcEE
Confidence            579999999999999999999999999987655322   233567899999999 776665 579999999999865421


Q ss_pred             --ccc----------ccCceEEEecCCCcEEEEEccCCCcce-----------eeecCCCcceEEEEEccC-CCEEEEee
Q psy8758          82 --LNV----------HKDMTSAAANEDFNLYSYDIRQLNSPL-----------NVHKDMTSAVTSVDYSPT-GREFVAGG  137 (198)
Q Consensus        82 --~~~----------~~~~~~~~~~~~~~i~~~d~~~~~~~~-----------~~~~~~~~~i~~~~~sp~-~~~l~~~~  137 (198)
                        +..          .....+++++.||.|++||++. ....           ....+|..+|.+++|+|+ +..+++++
T Consensus        93 ~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~-~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~  171 (902)
T 2oaj_A           93 TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR-DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY  171 (902)
T ss_dssp             EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTT-TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred             EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC-CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence              111          1235789999999999999987 3322           233568899999999996 57899999


Q ss_pred             cCCcEEEEEcCCCceeeEEec-----------------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         138 YDKSLRLYLAHQGHSRDIYHT-----------------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~~~-----------------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .|+.| +||+++++....+..                 .|...|.+++|+|+|++|++++.||.|++||+++++++
T Consensus       172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~  246 (902)
T 2oaj_A          172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI  246 (902)
T ss_dssp             SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred             CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence            99999 999999988776621                 13467999999999999999999999999999988764

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.1e-30  Score=187.22  Aligned_cols=190  Identities=18%  Similarity=0.289  Sum_probs=150.8

Q ss_pred             cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCC---eEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEA---FVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|.+++|+| +++++++++.||.|++||+.+++....+.   +...+.++.|+|.+.   .+++ ++.++.|++||+++
T Consensus       100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~~~  175 (408)
T 4a11_B          100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAV-GTRGPKVQLCDLKS  175 (408)
T ss_dssp             SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEE-EESSSSEEEEESSS
T ss_pred             CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEE-EcCCCeEEEEeCCC
Confidence            4699999999 77899999999999999998877554443   467789999998654   5554 67999999999986


Q ss_pred             CCCc--ccccc------------CceEEEecCCCcEEEEEccCCCcceeee---------------cCCCcceEEEEEcc
Q psy8758          78 LNSP--LNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVH---------------KDMTSAVTSVDYSP  128 (198)
Q Consensus        78 ~~~~--~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------------~~~~~~i~~~~~sp  128 (198)
                      ....  +..|.            ..++++++.|+.|++||++....++..+               ..|...|.+++|+|
T Consensus       176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  255 (408)
T 4a11_B          176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS  255 (408)
T ss_dssp             SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred             cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence            5422  22221            2268899999999999998744444444               56888999999999


Q ss_pred             CCCEEEEeecCCcEEEEEcCCCcee-----------------------------------------------eEEeccCc
Q psy8758         129 TGREFVAGGYDKSLRLYLAHQGHSR-----------------------------------------------DIYHTKRM  161 (198)
Q Consensus       129 ~~~~l~~~~~d~~v~v~d~~~~~~~-----------------------------------------------~~~~~~~~  161 (198)
                      ++++|++++.|+.|++||+.+++..                                               ..+ .+|.
T Consensus       256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~  334 (408)
T 4a11_B          256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML-KGHY  334 (408)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-CCCS
T ss_pred             CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-ccCC
Confidence            9999999999999999999865422                                               222 4688


Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..|.+++|+|++++|++++.||.|++||+++++.+
T Consensus       335 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~  369 (408)
T 4a11_B          335 KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV  369 (408)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred             CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence            89999999999999999999999999999998765

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.2e-31  Score=189.96  Aligned_cols=184  Identities=17%  Similarity=0.166  Sum_probs=150.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|.+++|+|++++|++++.||.|++||+.+++...   ...|...|.+++|  +|++..+++ ++.|+.|++||+++..
T Consensus        87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~  162 (368)
T 3mmy_A           87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPNYSCVMT-GSWDKTLKFWDTRSSN  162 (368)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSSCEEEEE-EETTSEEEEECSSCSS
T ss_pred             CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCCCCEEEE-ccCCCcEEEEECCCCc
Confidence            579999999999999999999999999998876443   3346888999999  888887776 5689999999997654


Q ss_pred             Ccc--ccc--------------------------------------------------------cCceEEEecCCCcEEE
Q psy8758          80 SPL--NVH--------------------------------------------------------KDMTSAAANEDFNLYS  101 (198)
Q Consensus        80 ~~~--~~~--------------------------------------------------------~~~~~~~~~~~~~i~~  101 (198)
                      ...  ..+                                                        ....+++++.|+.+++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i  242 (368)
T 3mmy_A          163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI  242 (368)
T ss_dssp             CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred             EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence            211  100                                                        0012889999999999


Q ss_pred             EEccCCC--cceeeecCCCc------------ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEE
Q psy8758         102 YDIRQLN--SPLNVHKDMTS------------AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT  167 (198)
Q Consensus       102 ~d~~~~~--~~~~~~~~~~~------------~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~  167 (198)
                      ||++...  .....+..|..            .+.+++|+|++++|++++.||.|++||+++++.+..+ ..|...|.++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~  321 (368)
T 3mmy_A          243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS-EQLDQPISAC  321 (368)
T ss_dssp             EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC-CCCSSCEEEE
T ss_pred             EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe-cCCCCCceEE
Confidence            9998732  45666677765            7999999999999999999999999999999888776 6788999999


Q ss_pred             EEcCCCCEEEEecCCCeEEEEec
Q psy8758         168 VWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       168 ~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +|+|++++|++++.|+..+.|++
T Consensus       322 ~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          322 CFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             EECTTSSCEEEEECCCSTTCGGG
T ss_pred             EECCCCCeEEEEecccccccccc
Confidence            99999999999998875555544

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-31  Score=201.73  Aligned_cols=192  Identities=12%  Similarity=0.108  Sum_probs=144.8

Q ss_pred             cceeEEEECCCC---------ceEEE-------------------eeCCCeEEEEEccCCceeee-eeee-eecCceeeE
Q psy8758           2 QHVTHTVWSLDN---------KFVIS-------------------ASDEMNLRVWKAHASEKLGP-IRKV-VMSLRSNMV   51 (198)
Q Consensus         2 ~~v~~~~~s~~~---------~~l~~-------------------~~~d~~i~i~~~~~~~~~~~-~~~~-~~~~~v~~~   51 (198)
                      ++|.+++|+|++         ++||+                   ++.|++|+||++.+++.... .... .+...|.++
T Consensus       134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v  213 (524)
T 2j04_B          134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDL  213 (524)
T ss_dssp             C--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEE
T ss_pred             CceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEE
Confidence            467777887765         55555                   55788999999987764221 1112 246789999


Q ss_pred             EeCCC------CCeEEEEecCCccEEEEeccCCCC-------------cccc----------ccCceEEEecCCCcEEEE
Q psy8758          52 SWNPM------EAFVFTAANEDFNLYSYDIRQLNS-------------PLNV----------HKDMTSAAANEDFNLYSY  102 (198)
Q Consensus        52 ~~~~~------~~~~~~~~~~d~~i~~~d~~~~~~-------------~~~~----------~~~~~~~~~~~~~~i~~~  102 (198)
                      +|+|+      +..| ++++.|++|++||+.....             .+..          +.+..+++|+.||+|++|
T Consensus       214 ~wsp~~~~~~~~~~L-As~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lW  292 (524)
T 2j04_B          214 KWHEGCHAPHLVGCL-SFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEF  292 (524)
T ss_dssp             EECSSCCCSSSSCEE-EEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEE
T ss_pred             EECCCCCCCCCCceE-EEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEE
Confidence            99997      3455 4567999999999975421             1122          233579999999999999


Q ss_pred             EccCCCcceeeecCCCcceEEE--EEccCC-CEEEEeecCCcEEEEEcCCCceeeEEeccCc--ccEEEEEEcCCCCEEE
Q psy8758         103 DIRQLNSPLNVHKDMTSAVTSV--DYSPTG-REFVAGGYDKSLRLYLAHQGHSRDIYHTKRM--QHVTHTVWSLDNKFVI  177 (198)
Q Consensus       103 d~~~~~~~~~~~~~~~~~i~~~--~~sp~~-~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~  177 (198)
                      |+++...+...+..|...|.++  +|+|++ ++|++++.|++|++||+++++....+ .+|.  ..|.+++|+|+++.++
T Consensus       293 D~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~-~~~~~~~~v~~v~fsp~~~~l~  371 (524)
T 2j04_B          293 DLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT-VSRFRGSNLVPVVYCPQIYSYI  371 (524)
T ss_dssp             ETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-EEECSCCSCCCEEEETTTTEEE
T ss_pred             ECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-ccccccCcccceEeCCCcCeEE
Confidence            9997445666788999999999  578888 89999999999999999998776655 3443  2578999999999999


Q ss_pred             EecCCCeEEEEecCCCcc
Q psy8758         178 SASDEMNLRVWKAHASEK  195 (198)
Q Consensus       178 ~~~~dg~v~~w~~~~~~~  195 (198)
                      +++.|++|++||++++.+
T Consensus       372 s~~~d~tv~lwd~~~~~~  389 (524)
T 2j04_B          372 YSDGASSLRAVPSRAAFA  389 (524)
T ss_dssp             EECSSSEEEEEETTCTTC
T ss_pred             EeCCCCcEEEEECccccc
Confidence            999999999999998775

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=9.7e-31  Score=206.59  Aligned_cols=192  Identities=12%  Similarity=0.264  Sum_probs=166.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|.+++|+|++++|++++.||.|++||+.+++....+..  |...|.+++|+|+++.++++ +.|+.|++||+.+....
T Consensus        14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~-~~dg~i~vw~~~~~~~~   90 (814)
T 3mkq_A           14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV--TETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKV   90 (814)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEE
T ss_pred             CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEec--CCCcEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEE
Confidence            5799999999999999999999999999998877666654  57889999999999998875 58999999999765432


Q ss_pred             --cccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEc
Q psy8758          82 --LNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        82 --~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~  147 (198)
                        +..|           .+..+++++.|+.|++||+.+.......+..|...+.+++|+| +++.+++++.|+.|++||+
T Consensus        91 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~  170 (814)
T 3mkq_A           91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL  170 (814)
T ss_dssp             EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred             EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence              2223           2346899999999999999984467778888999999999999 8899999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .++.....+...+...+..++|+|  ++.+|++++.||.|++||+.+++.+
T Consensus       171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~  221 (814)
T 3mkq_A          171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV  221 (814)
T ss_dssp             TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred             CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence            998887777666668999999999  9999999999999999999987754

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=2.1e-30  Score=191.83  Aligned_cols=188  Identities=17%  Similarity=0.276  Sum_probs=153.3

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccC----------CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHA----------SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      +.|++++|+|+ ++++++++.||.|++|++..          .+....+.  .|...+.+++|+|++..++++|+.||.|
T Consensus       129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i  206 (430)
T 2xyi_A          129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGYLLSASDDHTI  206 (430)
T ss_dssp             SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred             CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence            57999999997 68999999999999999976          23333333  3677899999999998444557899999


Q ss_pred             EEEeccCCC---------Cccccc------------cCceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEc
Q psy8758          71 YSYDIRQLN---------SPLNVH------------KDMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        71 ~~~d~~~~~---------~~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~s  127 (198)
                      ++||+....         ..+..|            ...++++++.|+.|++||++...  .++..+..|...+++++|+
T Consensus       207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~  286 (430)
T 2xyi_A          207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN  286 (430)
T ss_dssp             EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred             EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence            999998622         112222            34578999999999999999742  5677778899999999999


Q ss_pred             cCCC-EEEEeecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCC
Q psy8758         128 PTGR-EFVAGGYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       128 p~~~-~l~~~~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~  192 (198)
                      |+++ ++++++.|+.|++||++.. ..+..+ ..|...|.+++|+|+++ +|++++.||.|++||+..
T Consensus       287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~  353 (430)
T 2xyi_A          287 PYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK  353 (430)
T ss_dssp             SSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence            9987 6889999999999999984 445554 57889999999999985 688999999999999987

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.8e-30  Score=199.09  Aligned_cols=188  Identities=16%  Similarity=0.237  Sum_probs=159.4

Q ss_pred             eeEEEECC--CCceEEEeeCCCeEEEEEccCC--------ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC----cc
Q psy8758           4 VTHTVWSL--DNKFVISASDEMNLRVWKAHAS--------EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED----FN   69 (198)
Q Consensus         4 v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~   69 (198)
                      |++++|+|  ++++|++++.||.|++||+.++        +....+.  .+...|.+++|+|+++.+++++ .+    +.
T Consensus        67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~-~~~~~~~~  143 (615)
T 1pgu_A           67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ--VLAGPISDISWDFEGRRLCVVG-EGRDNFGV  143 (615)
T ss_dssp             EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE--CCSSCEEEEEECTTSSEEEEEE-CCSSCSEE
T ss_pred             EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh--cccccEEEEEEeCCCCEEEEec-cCCCCccE
Confidence            99999999  9999999999999999999754        2222222  2678899999999999998865 44    78


Q ss_pred             EEEEeccCCCCccccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCc---ceEEEEEccC-CCEE
Q psy8758          70 LYSYDIRQLNSPLNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS---AVTSVDYSPT-GREF  133 (198)
Q Consensus        70 i~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~i~~~~~sp~-~~~l  133 (198)
                      |++||.......+..|..            ..+++++.|+.|++||+++ .+.+..+..|..   .+.+++|+|+ +++|
T Consensus       144 v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  222 (615)
T 1pgu_A          144 FISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGEFV  222 (615)
T ss_dssp             EEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCCEE
T ss_pred             EEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-cceeeeecccCCCCceEEEEEECCCCCCEE
Confidence            999996543333333322            2799999999999999988 678888888988   9999999999 9999


Q ss_pred             EEeecCCcEEEEEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         134 VAGGYDKSLRLYLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       134 ~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++++.|+.|++||+++++.+..+..   .|...|.+++|+ ++++|++++.|+.|++||+++++.+
T Consensus       223 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~  287 (615)
T 1pgu_A          223 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV  287 (615)
T ss_dssp             EEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             EEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence            9999999999999999988877644   788999999999 9999999999999999999988754

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.98  E-value=6.9e-31  Score=194.70  Aligned_cols=190  Identities=13%  Similarity=0.255  Sum_probs=149.7

Q ss_pred             cceeEEEECCCC--ceEEEeeCCCeEEEEEccCCceeee--------------------------------------eee
Q psy8758           2 QHVTHTVWSLDN--KFVISASDEMNLRVWKAHASEKLGP--------------------------------------IRK   41 (198)
Q Consensus         2 ~~v~~~~~s~~~--~~l~~~~~d~~i~i~~~~~~~~~~~--------------------------------------~~~   41 (198)
                      ++|++++|+|++  .++++++.|+.|++||+.+++....                                      ...
T Consensus        94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (447)
T 3dw8_B           94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA  173 (447)
T ss_dssp             CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred             CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence            569999999998  7999999999999999976432100                                      111


Q ss_pred             eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC----------ccccc----------c-C-ceEEEecCCCcE
Q psy8758          42 VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS----------PLNVH----------K-D-MTSAAANEDFNL   99 (198)
Q Consensus        42 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~----------~~~~~----------~-~-~~~~~~~~~~~i   99 (198)
                      ..|...|.+++|+|+++.+++ | .|+.|++||++....          .+..|          + + ..+++++.|+.|
T Consensus       174 ~~h~~~v~~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i  251 (447)
T 3dw8_B          174 NAHTYHINSISINSDYETYLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI  251 (447)
T ss_dssp             SCCSSCCCEEEECTTSSEEEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred             cCCCcceEEEEEcCCCCEEEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence            236788999999999998876 5 699999999983221          11222          2 2 579999999999


Q ss_pred             EEEEccCCCcc----eeeecCCCc------------ceEEEEEccCCCEEEEeecCCcEEEEEcCC-CceeeEEeccCcc
Q psy8758         100 YSYDIRQLNSP----LNVHKDMTS------------AVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-GHSRDIYHTKRMQ  162 (198)
Q Consensus       100 ~~~d~~~~~~~----~~~~~~~~~------------~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~-~~~~~~~~~~~~~  162 (198)
                      ++||+++ ...    ...+..|..            .|.+++|+|++++|++++. +.|++||++. ++++..+ ..|..
T Consensus       252 ~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~-~~~~~  328 (447)
T 3dw8_B          252 RLCDMRA-SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY-QVHEY  328 (447)
T ss_dssp             EEEETTT-CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE-ESCGG
T ss_pred             EEEECcC-CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee-ecccc
Confidence            9999998 444    677777775            8999999999999999998 9999999997 7776666 45532


Q ss_pred             c---------------EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         163 H---------------VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       163 ~---------------v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .               +..++|+|++++|++++.||.|++||+.+++.+
T Consensus       329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~  377 (447)
T 3dw8_B          329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI  377 (447)
T ss_dssp             GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred             ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence            1               334899999999999999999999999988753

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.98  E-value=1.4e-29  Score=182.95  Aligned_cols=189  Identities=12%  Similarity=0.202  Sum_probs=162.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~   76 (198)
                      +.|.+++|+|++++|++++.||.|++||+.+++....+.   +...+.+++|+|+++.++++ +.+     +.|.+||+.
T Consensus        75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~~~~~~~g~i~~~d~~  150 (369)
T 3zwl_B           75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGNYFLAI-LDNVMKNPGSINIYEIE  150 (369)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSSEEEEE-ECCBTTBCCEEEEEEEE
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCCEEEEe-cCCccCCCCEEEEEEec
Confidence            578999999999999999999999999999887655554   57789999999999998875 466     999999987


Q ss_pred             CCCCc-------------ccc-------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC
Q psy8758          77 QLNSP-------------LNV-------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        77 ~~~~~-------------~~~-------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~  130 (198)
                      .....             +..             ..+..+++++.|+.|++||+++....+..+..|...+.+++|+|++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~  230 (369)
T 3zwl_B          151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL  230 (369)
T ss_dssp             ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred             CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC
Confidence            54321             111             1234789999999999999997567788888899999999999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC--------------eEEEEecCCCccc
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--------------NLRVWKAHASEKL  196 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------------~v~~w~~~~~~~~  196 (198)
                      ++|++++.|+.|++||+++++....+.  +...+..++|+|+++++++++.++              .+++||+.+++.+
T Consensus       231 ~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~  308 (369)
T 3zwl_B          231 TYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI  308 (369)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred             CEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence            999999999999999999998888774  568899999999999999998888              8999999888764

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.98  E-value=3.8e-31  Score=193.71  Aligned_cols=186  Identities=13%  Similarity=0.074  Sum_probs=132.4

Q ss_pred             cceeEEEECC--------CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           2 QHVTHTVWSL--------DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~--------~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      +.|++++|+|        ++++||+++.|++|+|||+.++.....+.  .+...+.+++|+|++..++++++.|+.|++|
T Consensus       137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~w  214 (393)
T 4gq1_A          137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY--PLSSPGISVQFRPSNPNQLIVGERNGNIRIF  214 (393)
T ss_dssp             SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE--ECSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred             CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec--CCCCCcEEEEECCCCCceEEecCCCCEEEEE
Confidence            5699999998        88999999999999999998776544443  3577899999999988766778899999999


Q ss_pred             eccCCCCcc---------------------------------------ccccCceEEEecCCCcEEEEEccCCCcceeee
Q psy8758          74 DIRQLNSPL---------------------------------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH  114 (198)
Q Consensus        74 d~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~  114 (198)
                      |+++.....                                       ....+..+++++.|+++++||+.. .+....+
T Consensus       215 d~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l  293 (393)
T 4gq1_A          215 DWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEI  293 (393)
T ss_dssp             ETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred             ECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceE
Confidence            997543211                                       012335689999999999999986 3444444


Q ss_pred             cCCCcceEEE------------------EEcc--CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC
Q psy8758         115 KDMTSAVTSV------------------DYSP--TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK  174 (198)
Q Consensus       115 ~~~~~~i~~~------------------~~sp--~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~  174 (198)
                      ..|...+..+                  .++|  ++.++++++.|+.|++||+.+++..... .+|..+|.+++|+|||+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~-~~~~~~V~svafspdG~  372 (393)
T 4gq1_A          294 SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP-IQLGMPIVDFCWHQDGS  372 (393)
T ss_dssp             ----------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE-EECSSCEEEEEECTTSS
T ss_pred             eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe-cCCCCcEEEEEEcCCCC
Confidence            3333333332                  3333  2336678889999999999999887766 56778999999999999


Q ss_pred             EEEEecCCCeEEEEecCC
Q psy8758         175 FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       175 ~l~~~~~dg~v~~w~~~~  192 (198)
                      +||+++.+| +.+|++..
T Consensus       373 ~LA~as~~G-v~lvrL~g  389 (393)
T 4gq1_A          373 HLAIATEGS-VLLTRLMG  389 (393)
T ss_dssp             EEEEEESSE-EEEEEEGG
T ss_pred             EEEEEeCCC-eEEEEEeC
Confidence            999998665 66666543

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.98  E-value=1.7e-30  Score=187.13  Aligned_cols=188  Identities=14%  Similarity=0.256  Sum_probs=153.2

Q ss_pred             cceeEEEECCC---CceEEEeeCCCeEEEEEccCCc-eeeeeeeeeecCceeeE------EeCCCCCeEEEEecCCccEE
Q psy8758           2 QHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE-KLGPIRKVVMSLRSNMV------SWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         2 ~~v~~~~~s~~---~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~------~~~~~~~~~~~~~~~d~~i~   71 (198)
                      ++|.+++|+|+   ++++++++.||.|++||+.+++ ....+..  |...|.++      +|+|+++.+++ ++.|+.|+
T Consensus        66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~s~~~~~l~~-~~~d~~i~  142 (357)
T 3i2n_A           66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG--HKEIINAIDGIGGLGIGEGAPEIVT-GSRDGTVK  142 (357)
T ss_dssp             SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC--CSSCEEEEEEESGGGCC-CCCEEEE-EETTSCEE
T ss_pred             CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe--cccceEEEeeccccccCCCccEEEE-EeCCCeEE
Confidence            57999999998   6999999999999999998876 4445443  57788888      45788888876 56899999


Q ss_pred             EEeccCCCCc---ccc-------------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-
Q psy8758          72 SYDIRQLNSP---LNV-------------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-  128 (198)
Q Consensus        72 ~~d~~~~~~~---~~~-------------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-  128 (198)
                      +||++.....   +..                   ..+..+++++.|+.|++||+++ .+. .....|...+.+++|+| 
T Consensus       143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~  220 (357)
T 3i2n_A          143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRK  220 (357)
T ss_dssp             EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCS
T ss_pred             EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCC
Confidence            9999865421   111                   2345789999999999999997 444 34456888999999999 


Q ss_pred             --CCCEEEEeecCCcEEEEEcCCCceeeEE----eccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758         129 --TGREFVAGGYDKSLRLYLAHQGHSRDIY----HTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       129 --~~~~l~~~~~d~~v~v~d~~~~~~~~~~----~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~  194 (198)
                        +++++++++.|+.|++||+++++....+    ..+|...|.+++|+|+++ +|++++.||.|++||+++++
T Consensus       221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  293 (357)
T 3i2n_A          221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI  293 (357)
T ss_dssp             SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred             CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence              9999999999999999999987665444    237889999999999998 89999999999999998654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.98  E-value=4.2e-30  Score=210.81  Aligned_cols=191  Identities=20%  Similarity=0.291  Sum_probs=162.6

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|++++|+|+|+++++|+.||.|++||+.+++....+..  |...|.+++|+|++++++++ +.|+.|++||+.+....
T Consensus       616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~-~~d~~v~vwd~~~~~~~  692 (1249)
T 3sfz_A          616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA--HEDEVLCCAFSSDDSYIATC-SADKKVKIWDSATGKLV  692 (1249)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEE
T ss_pred             ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc--CCCCEEEEEEecCCCEEEEE-eCCCeEEEEECCCCceE
Confidence            5799999999999999999999999999999887666654  57889999999999988775 68999999999865422


Q ss_pred             --cccc-------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          82 --LNVH-------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        82 --~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                        +..|             ...++++++.|+.|++||+++ +.....+.+|...|.+++|+|+++++++++.|+.|++||
T Consensus       693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd  771 (1249)
T 3sfz_A          693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD  771 (1249)
T ss_dssp             EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred             EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence              2222             234688999999999999998 678888899999999999999999999999999999999


Q ss_pred             cCCCceeeEE------------------------------------------------------eccCcccEEEEEEcCC
Q psy8758         147 AHQGHSRDIY------------------------------------------------------HTKRMQHVTHTVWSLD  172 (198)
Q Consensus       147 ~~~~~~~~~~------------------------------------------------------~~~~~~~v~~~~~s~~  172 (198)
                      +.+++....+                                                      ..+|...+.+++|+|+
T Consensus       772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~  851 (1249)
T 3sfz_A          772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY  851 (1249)
T ss_dssp             GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred             CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence            9876543222                                                      2256778999999999


Q ss_pred             CCEEEEecCCCeEEEEecCCCccc
Q psy8758         173 NKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       173 ~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++++++++.||.|++||+.+++.+
T Consensus       852 ~~~l~~~~~dg~v~vwd~~~~~~~  875 (1249)
T 3sfz_A          852 DHLAVIALSQYCVELWNIDSRLKV  875 (1249)
T ss_dssp             TTEEEEECSSSCEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCeEEEEEcCCCcee
Confidence            999999999999999999887654

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.98  E-value=5.6e-30  Score=188.20  Aligned_cols=187  Identities=14%  Similarity=0.149  Sum_probs=156.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee----------------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK----------------------------------------   41 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~----------------------------------------   41 (198)
                      ++|.+++|+|++++|++++.|+.|++||+.+++....+..                                        
T Consensus       150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  229 (425)
T 1r5m_A          150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAI  229 (425)
T ss_dssp             SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCE
T ss_pred             ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeE
Confidence            5789999999999999999999999999987654332211                                        


Q ss_pred             -------------e-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc----------cCceEEEecC
Q psy8758          42 -------------V-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH----------KDMTSAAANE   95 (198)
Q Consensus        42 -------------~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~----------~~~~~~~~~~   95 (198)
                                   . .+...+.+++|+|+++.++++ +.|+.|++||++.....  +..|          ++..+++++.
T Consensus       230 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~  308 (425)
T 1r5m_A          230 FVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA-SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSM  308 (425)
T ss_dssp             EEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE-ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEET
T ss_pred             EEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeC
Confidence                         1 245678999999999988764 68999999998765422  1112          2237899999


Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc--------------------eeeE
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH--------------------SRDI  155 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~--------------------~~~~  155 (198)
                      |+.|++||+++ .+.+..+..|...+.+++|+|++++|++++.|+.|++||+++++                    .+..
T Consensus       309 d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (425)
T 1r5m_A          309 DGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS  387 (425)
T ss_dssp             TSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEE
T ss_pred             CCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhh
Confidence            99999999998 67888888899999999999999999999999999999999877                    6665


Q ss_pred             EeccCcc--cEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         156 YHTKRMQ--HVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       156 ~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      + ..|..  .|.+++|+|++++|++++.||.|++|+++
T Consensus       388 ~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          388 Y-QSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             E-CCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             h-cCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            5 56655  99999999999999999999999999986

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.98  E-value=8.9e-30  Score=183.44  Aligned_cols=191  Identities=13%  Similarity=0.117  Sum_probs=152.9

Q ss_pred             cceeEEEECCCCceE-EEeeC---CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC---CCeEEEEecCCccEEEEe
Q psy8758           2 QHVTHTVWSLDNKFV-ISASD---EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM---EAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l-~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~d~~i~~~d   74 (198)
                      +.|.+++|+|+++.+ ++++.   |+.|++||+.+++... .....|...|.+++|+|+   +..+++ ++.|+.|++||
T Consensus        19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~dg~i~iwd   96 (357)
T 3i2n_A           19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL-LREIEKAKPIKCGTFGATSLQQRYLAT-GDFGGNLHIWN   96 (357)
T ss_dssp             SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE-EEEEEESSCEEEEECTTCCTTTCCEEE-EETTSCEEEEC
T ss_pred             CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc-eeeecccCcEEEEEEcCCCCCCceEEE-ecCCCeEEEEe
Confidence            479999999999654 56655   8999999998876433 333357889999999998   577665 57899999999


Q ss_pred             ccCCC---Cccccc-----------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCc----ceEEEE----E
Q psy8758          75 IRQLN---SPLNVH-----------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS----AVTSVD----Y  126 (198)
Q Consensus        75 ~~~~~---~~~~~~-----------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~i~~~~----~  126 (198)
                      +....   ..+..|                 .+..+++++.|+.|++||+++...++..+..+..    .+.+++    |
T Consensus        97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  176 (357)
T 3i2n_A           97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY  176 (357)
T ss_dssp             TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred             CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence            98654   122222                 2347899999999999999984446777765544    788888    7


Q ss_pred             ccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC---CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         127 SPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL---DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +|+++++++++.|+.|++||+++++....  ..|...|.+++|+|   ++++|++++.||.|++||+++++.+
T Consensus       177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  247 (357)
T 3i2n_A          177 NQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT  247 (357)
T ss_dssp             C-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred             CCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence            89999999999999999999999887554  46778999999999   9999999999999999999887654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.98  E-value=1.1e-29  Score=183.51  Aligned_cols=191  Identities=15%  Similarity=0.208  Sum_probs=147.2

Q ss_pred             cceeEEEECCC---CceEEEeeCCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLD---NKFVISASDEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~---~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.|++++|+|+   |++|++++.||.|++||+.+ +... ......|...|.+++|+|+++.+++ ++.|+.|++||+++
T Consensus        40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~v~iwd~~~  117 (368)
T 3mmy_A           40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI-PKAQQMHTGPVLDVCWSDDGSKVFT-ASCDKTAKMWDLSS  117 (368)
T ss_dssp             SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-EEEEEECSSCEEEEEECTTSSEEEE-EETTSEEEEEETTT
T ss_pred             CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-EEEeccccCCEEEEEECcCCCEEEE-EcCCCcEEEEEcCC
Confidence            57999999999   69999999999999999987 4332 1222236888999999999998886 46899999999976


Q ss_pred             CCCc-----------cc---cccCceEEEecCCCcEEEEEccCCCcceeeecCCC-------------------------
Q psy8758          78 LNSP-----------LN---VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-------------------------  118 (198)
Q Consensus        78 ~~~~-----------~~---~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------------------------  118 (198)
                      ....           +.   ...+..+++++.|+.|++||+++ .+++..+..+.                         
T Consensus       118 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  196 (368)
T 3mmy_A          118 NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS-SNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQ  196 (368)
T ss_dssp             TEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC-SSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEE
T ss_pred             CCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC-CcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEE
Confidence            5421           11   12335699999999999999987 45554444322                         


Q ss_pred             ----------------cceEEEEEccCCCE----EEEeecCCcEEEEEcCCC---ceeeEEeccCcc------------c
Q psy8758         119 ----------------SAVTSVDYSPTGRE----FVAGGYDKSLRLYLAHQG---HSRDIYHTKRMQ------------H  163 (198)
Q Consensus       119 ----------------~~i~~~~~sp~~~~----l~~~~~d~~v~v~d~~~~---~~~~~~~~~~~~------------~  163 (198)
                                      ....++++.++...    +++++.|+.|++||++..   .....+ ..|..            .
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  275 (368)
T 3mmy_A          197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF-KCHRSNGTNTSAPQDIYA  275 (368)
T ss_dssp             CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE-ECSEEC----CCCEEECC
T ss_pred             eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee-eeeecccccccccccccc
Confidence                            33455555555544    999999999999999987   334444 44544            7


Q ss_pred             EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |.+++|+|++++|++++.||.|++||+++++++
T Consensus       276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~  308 (368)
T 3mmy_A          276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL  308 (368)
T ss_dssp             EEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred             eEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence            999999999999999999999999999998765

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.98  E-value=9.6e-30  Score=186.66  Aligned_cols=188  Identities=16%  Similarity=0.259  Sum_probs=155.6

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~   81 (198)
                      +.+++|++  ..+++++.|+.|++|++.+++....+.. .+...|.+++|+|+++.+++ ++.|+.|++||+.+...  .
T Consensus        96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~-~~~~~v~~v~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~  171 (401)
T 4aez_A           96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET-DESTYVASVKWSHDGSFLSV-GLGNGLVDIYDVESQTKLRT  171 (401)
T ss_dssp             CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC-CTTCCEEEEEECTTSSEEEE-EETTSCEEEEETTTCCEEEE
T ss_pred             EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec-CCCCCEEEEEECCCCCEEEE-ECCCCeEEEEECcCCeEEEE
Confidence            44577775  4577888999999999998876554443 36778999999999998876 46899999999976542  2


Q ss_pred             ccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          82 LNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        82 ~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                      +..|.         +..+++++.|+.|++||++........+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus       172 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~  251 (401)
T 4aez_A          172 MAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP  251 (401)
T ss_dssp             ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred             ecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence            22332         357899999999999999965677888889999999999999999999999999999999999888


Q ss_pred             eeEEeccCcccEEEEEEcCCCC-EEEEec--CCCeEEEEecCCCccc
Q psy8758         153 RDIYHTKRMQHVTHTVWSLDNK-FVISAS--DEMNLRVWKAHASEKL  196 (198)
Q Consensus       153 ~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~dg~v~~w~~~~~~~~  196 (198)
                      ...+ ..|...|.+++|+|++. ++++++  .|+.|++||+.+++.+
T Consensus       252 ~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~  297 (401)
T 4aez_A          252 KFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV  297 (401)
T ss_dssp             EEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred             cEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence            7776 57889999999999775 566654  7999999999988764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.98  E-value=1.2e-30  Score=187.73  Aligned_cols=178  Identities=8%  Similarity=0.017  Sum_probs=142.7

Q ss_pred             ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC---------C
Q psy8758           9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL---------N   79 (198)
Q Consensus         9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~---------~   79 (198)
                      +.++++++++|+.||.|++||+.+++....+.    ...+.++.|+|+   + ++++.|+.+++|+....         .
T Consensus        44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~-~s~s~D~~i~~w~~~~~~~~~~~~~~~  115 (343)
T 3lrv_A           44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---I-ISRGPCNRLLLLYPGNQITILDSKTNK  115 (343)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---E-EEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred             hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---e-EEecCCCeEEEEEccCceEEeecCCcc
Confidence            34578899999999999999999888766665    345788899998   4 45689999999976521         1


Q ss_pred             -------------Cccccc---cCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          80 -------------SPLNVH---KDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        80 -------------~~~~~~---~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                                   ..+..+   .+..+++++.|+.|++||+++ ++.+... ..+...+.+++|+|++++|++|+.|+.|
T Consensus       116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i  194 (343)
T 3lrv_A          116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED-DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL  194 (343)
T ss_dssp             EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS-SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred             eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC-CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence                         001112   345789999999999999998 5555555 3455679999999999999999999999


Q ss_pred             EEEEcCCCcee-eEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHSR-DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++||+++++.. ..+..+|...|.+++|+|++.+|++++ |+.|++||+++++.+
T Consensus       195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~  248 (343)
T 3lrv_A          195 DVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT  248 (343)
T ss_dssp             EEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred             EEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence            99999999887 555334899999999999999999999 559999999988754

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.98  E-value=4.6e-31  Score=190.65  Aligned_cols=188  Identities=12%  Similarity=0.184  Sum_probs=152.9

Q ss_pred             cceeEEEECCC----CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLD----NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~----~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      +.|.+++|+|+    +++|++++.||.|++||+.+++....+..  |...|.+++|+| ++..+++ ++.|+.|++||++
T Consensus        70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s-~~~dg~i~iwd~~  146 (366)
T 3k26_A           70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLS-VSKDHALRLWNIQ  146 (366)
T ss_dssp             CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEE-EETTSCEEEEETT
T ss_pred             CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEE-EeCCCeEEEEEee
Confidence            46899999998    67999999999999999998876666553  578899999999 6776665 5789999999998


Q ss_pred             CCCCcc-----cccc-----------CceEEEecCCCcEEEEEccCCCcceeee--------------------------
Q psy8758          77 QLNSPL-----NVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVH--------------------------  114 (198)
Q Consensus        77 ~~~~~~-----~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~--------------------------  114 (198)
                      +.....     ..|.           +..+++++.|+.|++||+++ .+....+                          
T Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (366)
T 3k26_A          147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS  225 (366)
T ss_dssp             TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred             cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccc
Confidence            654221     2232           34689999999999999986 3333322                          


Q ss_pred             --cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce--------------eeEEeccCcccEEEEEEcCC--CCEE
Q psy8758         115 --KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS--------------RDIYHTKRMQHVTHTVWSLD--NKFV  176 (198)
Q Consensus       115 --~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~--------------~~~~~~~~~~~v~~~~~s~~--~~~l  176 (198)
                        ..|...|.+++|+  ++++++++.|+.|++||+.++..              +..+ ..|...|.+++|+|+  +++|
T Consensus       226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~l  302 (366)
T 3k26_A          226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYSQCDIWYMRFSMDFWQKML  302 (366)
T ss_dssp             ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECSSCCSSCCCCEECTTSSEE
T ss_pred             cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc-cccCCcEEEEEEcCCCCCcEE
Confidence              2388999999998  77999999999999999988644              3333 577788999999999  9999


Q ss_pred             EEecCCCeEEEEecCCCccc
Q psy8758         177 ISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       177 ~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++++.||.|++||+++++.+
T Consensus       303 ~~~~~dg~i~vwd~~~~~~~  322 (366)
T 3k26_A          303 ALGNQVGKLYVWDLEVEDPH  322 (366)
T ss_dssp             EEECTTSCEEEEECCSSSGG
T ss_pred             EEEecCCcEEEEECCCCCCc
Confidence            99999999999999988643

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.98  E-value=6.3e-30  Score=201.96  Aligned_cols=190  Identities=16%  Similarity=0.270  Sum_probs=161.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      ++|.+++|+|++++|++++.||.|++||+.+++....+..  |...|.+++|+|+++.+++ ++.|+.|++||++.... 
T Consensus        56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~~~  132 (814)
T 3mkq_A           56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA--HPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWAL  132 (814)
T ss_dssp             SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSEEEE-EETTSEEEEEEGGGTSEE
T ss_pred             CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCceE
Confidence            5799999999999999999999999999998887666644  5788999999999999876 56899999999876521 


Q ss_pred             --cccc----------c--cCceEEEecCCCcEEEEEccCCCcceeeecC-CCcceEEEEEcc--CCCEEEEeecCCcEE
Q psy8758          81 --PLNV----------H--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDYSP--TGREFVAGGYDKSLR  143 (198)
Q Consensus        81 --~~~~----------~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~sp--~~~~l~~~~~d~~v~  143 (198)
                        .+..          +  .+..+++++.|+.|++||+.. ..+...+.. +...+.+++|+|  +++++++++.|+.|+
T Consensus       133 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~  211 (814)
T 3mkq_A          133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK  211 (814)
T ss_dssp             EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred             EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence              1111          2  245799999999999999987 455555544 448899999999  999999999999999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+.+++....+ .+|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus       212 ~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~  263 (814)
T 3mkq_A          212 IWDYQTKSCVATL-EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE  263 (814)
T ss_dssp             EEETTTTEEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred             EEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            9999999887776 678899999999999999999999999999999987654

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.97  E-value=6.2e-30  Score=186.41  Aligned_cols=184  Identities=9%  Similarity=0.112  Sum_probs=143.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|.+++|+|++++|++++.|+.|++||+ +++....+..  |...|.+++|+|+++.++++++.|+.|++||+++....
T Consensus       164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~  240 (383)
T 3ei3_B          164 YWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL--HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK  240 (383)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC--SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred             CCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc--CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence            45899999999999999999999999999 4554444443  57889999999999955555679999999999863210


Q ss_pred             ---------------cccc--cCceEEEecCCCcEEEEEccCCCcceeeecCCC-----------------cceEEEEEc
Q psy8758          82 ---------------LNVH--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-----------------SAVTSVDYS  127 (198)
Q Consensus        82 ---------------~~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----------------~~i~~~~~s  127 (198)
                                     +...  .+..+++++.|+.|++||+++ ......+..|.                 ..+..++|+
T Consensus       241 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s  319 (383)
T 3ei3_B          241 NSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRY  319 (383)
T ss_dssp             TCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECB
T ss_pred             cceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEec
Confidence                           1111  456799999999999999987 44444444332                 234456777


Q ss_pred             cCCCEEEEeecCCcEEEEEcCCCceeeEEecc-CcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK-RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |++++  +++.|+.|++||+.+++.+..+... |...+..++|+|++++|++++ ||.|++||+++
T Consensus       320 ~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          320 PDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             CCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             CCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            77776  7789999999999999988877432 456778889999999999997 99999999975

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=6.9e-30  Score=200.57  Aligned_cols=189  Identities=12%  Similarity=0.214  Sum_probs=154.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|++++|+|+++++++|+.||.|++||+..+.  ....+.  .|...|.+++|+|+  ++.+++ ++.||.|++||+.+
T Consensus        10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~~~l~s-~s~Dg~I~vwd~~~   86 (753)
T 3jro_A           10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILAS-CSYDGKVLIWKEEN   86 (753)
T ss_dssp             CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCTTSCSEEEE-EETTSCEEEEEEET
T ss_pred             ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc--CCcCceEEEEecCCCCCCEEEE-EeCCCeEEEEECCC
Confidence            679999999999999999999999999997443  222332  36888999999988  777766 56999999999986


Q ss_pred             CC----Ccc----------cccc---CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEcc-----------
Q psy8758          78 LN----SPL----------NVHK---DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSP-----------  128 (198)
Q Consensus        78 ~~----~~~----------~~~~---~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp-----------  128 (198)
                      ..    ..+          ..++   +..+++++.|+.|++||++... .....+..|...+.+++|+|           
T Consensus        87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~  166 (753)
T 3jro_A           87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG  166 (753)
T ss_dssp             TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred             CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence            53    111          1112   5689999999999999998732 34456678999999999999           


Q ss_pred             --CCCEEEEeecCCcEEEEEcCCCce----eeEEeccCcccEEEEEEcCC---CCEEEEecCCCeEEEEecCCCc
Q psy8758         129 --TGREFVAGGYDKSLRLYLAHQGHS----RDIYHTKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       129 --~~~~l~~~~~d~~v~v~d~~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                        +++++++++.||.|++||++++..    ... ..+|...|.+++|+|+   +++|++++.||.|++||+.+++
T Consensus       167 ~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~  240 (753)
T 3jro_A          167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ  240 (753)
T ss_dssp             CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred             CCCCCEEEEEECCCeEEEEeccCCcccceeeee-ecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence              589999999999999999988742    233 3678899999999999   8999999999999999998864

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.2e-29  Score=177.55  Aligned_cols=185  Identities=16%  Similarity=0.173  Sum_probs=155.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--   79 (198)
                      ++|++++| |++++|++++.||.|++||+.+++....+..  +...+.+++|+|+++.++++ +.|+.+++|++....  
T Consensus        19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~   94 (313)
T 3odt_A           19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT--GQGFLNSVCYDSEKELLLFG-GKDTMINGVPLFATSGE   94 (313)
T ss_dssp             SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE--CSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTCCTTS
T ss_pred             CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec--CCccEEEEEECCCCCEEEEe-cCCCeEEEEEeeecCCC
Confidence            57999999 9999999999999999999987765555544  57889999999999988775 689999999987542  


Q ss_pred             ---Ccccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEE
Q psy8758          80 ---SPLNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 ---~~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d  146 (198)
                         ..+..|.         +..+++++.|+.|++||  . ......+..|...+.+++|+| +++.+++++.|+.|++||
T Consensus        95 ~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d  171 (313)
T 3odt_A           95 DPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--E-GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ  171 (313)
T ss_dssp             CC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--T-TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             CcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--C-CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence               2223333         34689999999999999  2 577788888999999999998 899999999999999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                        ..+....+...|...+.+++|+|++. +++++.||.|++||+++++.+
T Consensus       172 --~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~  218 (313)
T 3odt_A          172 --NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL  218 (313)
T ss_dssp             --TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE
T ss_pred             --cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh
Confidence              44555555445889999999999998 889999999999999988765

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.7e-29  Score=178.99  Aligned_cols=184  Identities=16%  Similarity=0.189  Sum_probs=151.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.|.+++|  +++++++++.|+.|++||  .++....+..  +...+.++.|+| ++..+++ ++.|+.+++||......
T Consensus       105 ~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~  177 (313)
T 3odt_A          105 GNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA--HNASVWDAKVVSFSENKFLT-ASADKTIKLWQNDKVIK  177 (313)
T ss_dssp             SCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC--CSSCEEEEEEEETTTTEEEE-EETTSCEEEEETTEEEE
T ss_pred             cCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc--CCCceeEEEEccCCCCEEEE-EECCCCEEEEecCceEE
Confidence            46888999  678999999999999999  4444444433  577899999998 6777665 57999999999654333


Q ss_pred             cccc-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          81 PLNV-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        81 ~~~~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      .+..           .++..+++++.|+.|++||+++ .+++..+..|...+.+++|+|++ .|++++.|+.|++||+++
T Consensus       178 ~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~  255 (313)
T 3odt_A          178 TFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN  255 (313)
T ss_dssp             EECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred             EEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence            3222           2233489999999999999998 68888899999999999999999 588999999999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++....+ ..|...|.+++|+|+++ +++++.||.|++||+++++.+
T Consensus       256 ~~~~~~~-~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~  300 (313)
T 3odt_A          256 GSLKQVI-TLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA  300 (313)
T ss_dssp             CCEEEEE-ECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred             CceeEEE-eccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence            9988877 57778999999999998 556889999999999987764

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.8e-30  Score=202.06  Aligned_cols=192  Identities=14%  Similarity=0.196  Sum_probs=155.9

Q ss_pred             cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ++|.+++|+|+  ++++++++.||.|++||+.+++.........|...|.+++|+|+  +..+++ ++.|+.|++||++.
T Consensus        54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~~  132 (753)
T 3jro_A           54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKE  132 (753)
T ss_dssp             SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCS
T ss_pred             CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE-EeCCCcEEEEEeec
Confidence            57999999998  99999999999999999988763223333336788999999999  777766 56999999999976


Q ss_pred             CCCc--------------cccc--------------cCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEE
Q psy8758          78 LNSP--------------LNVH--------------KDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        78 ~~~~--------------~~~~--------------~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~  126 (198)
                      ....              +..+              .+..+++++.||.|++||++...   .+...+..|...|.+++|
T Consensus       133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~  212 (753)
T 3jro_A          133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW  212 (753)
T ss_dssp             SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred             CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence            5211              1111              25679999999999999998733   445667889999999999


Q ss_pred             ccC---CCEEEEeecCCcEEEEEcCCCceee----EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         127 SPT---GREFVAGGYDKSLRLYLAHQGHSRD----IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       127 sp~---~~~l~~~~~d~~v~v~d~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +|+   ++++++++.||.|++||++++....    .....|...|.+++|+|+|++|++++.||.|++|++.++.
T Consensus       213 sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          213 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             CCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             ccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence            999   8999999999999999999864211    1124577899999999999999999999999999998643

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.97  E-value=8e-30  Score=182.86  Aligned_cols=190  Identities=8%  Similarity=0.060  Sum_probs=153.0

Q ss_pred             cceeEEEECCCCc-eEEEeeCCCeEEEEEc-cCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC--
Q psy8758           2 QHVTHTVWSLDNK-FVISASDEMNLRVWKA-HASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ--   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~--   77 (198)
                      +.|.+++|+|+++ +|++++.||.|++||+ .+++. ..+....|...|.+++|+| +..+++ ++.|+.|++||+++  
T Consensus        57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s-~~~d~~i~iwd~~~~~  133 (342)
T 1yfq_A           57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIA-ASWDGLIEVIDPRNYG  133 (342)
T ss_dssp             SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEE-EETTSEEEEECHHHHT
T ss_pred             CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEE-EcCCCeEEEEcccccc
Confidence            5789999999999 9999999999999999 77653 3333311578899999999 777776 56999999999876  


Q ss_pred             -------CCC--ccc---------cccCceEEEecCCCcEEEEEccC-CCcc-eeeecCCCcceEEEEEcc-CCCEEEEe
Q psy8758          78 -------LNS--PLN---------VHKDMTSAAANEDFNLYSYDIRQ-LNSP-LNVHKDMTSAVTSVDYSP-TGREFVAG  136 (198)
Q Consensus        78 -------~~~--~~~---------~~~~~~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~i~~~~~sp-~~~~l~~~  136 (198)
                             ...  .+.         .+.+ .+++++.++.|++||++. .... ......+...+.+++|+| ++++++++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~  212 (342)
T 1yfq_A          134 DGVIAVKNLNSNNTKVKNKIFTMDTNSS-RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS  212 (342)
T ss_dssp             TBCEEEEESCSSSSSSCCCEEEEEECSS-EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred             cccccccCCeeeEEeeCCceEEEEecCC-cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence                   331  111         1122 288999999999999987 4332 334456788999999999 99999999


Q ss_pred             ecCCcEEEEEcCCC------ceeeEEeccCc---------ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         137 GYDKSLRLYLAHQG------HSRDIYHTKRM---------QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       137 ~~d~~v~v~d~~~~------~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.|+.+++|+++..      +....+ ..|.         ..|.+++|+|++++|++++.||.|++||+.+++++
T Consensus       213 ~~dg~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~  286 (342)
T 1yfq_A          213 SIDGRVAVEFFDDQGDDYNSSKRFAF-RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI  286 (342)
T ss_dssp             ETTSEEEEEECCTTCCSTTCTTCEEE-ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred             ecCCcEEEEEEcCCCcccccccceee-ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence            99999999999886      555555 4453         39999999999999999999999999999988765

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.97  E-value=1.7e-30  Score=213.07  Aligned_cols=190  Identities=11%  Similarity=0.127  Sum_probs=166.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..+.+++|+|+++++++|+.+|.|++|++.+++....+..  |...|.+++|+|+++.++++ +.|+.|++||+.+....
T Consensus       962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~-~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A          962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG--HKKAVRHIQFTADGKTLISS-SEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC--CSSCCCCEEECSSSSCEEEE-CSSSBEEEEETTTTEEE
T ss_pred             CcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc--CCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCceE
Confidence            3588999999999999999999999999998876555543  57789999999999998874 68999999998764321


Q ss_pred             -----------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          82 -----------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        82 -----------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                                 +....+..+++++.|+.+++||+.+ ++....+..|...+.+++|+|+++++++++.|+.|++||+.++
T Consensus      1039 ~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~ 1117 (1249)
T 3sfz_A         1039 FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVIT-GRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLL 1117 (1249)
T ss_dssp             CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTT-TCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSS
T ss_pred             EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCC-CceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCc
Confidence                       2223445688999999999999998 6888889999999999999999999999999999999999999


Q ss_pred             ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +....+ .+|...|.+++|+|+|++|++++.||.|++||+.+++.+
T Consensus      1118 ~~~~~l-~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A         1118 SPLHEL-KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp             SCSBCC-CCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred             ceeeee-ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence            887766 688899999999999999999999999999999998865

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.97  E-value=7.9e-30  Score=188.80  Aligned_cols=192  Identities=12%  Similarity=0.125  Sum_probs=149.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEcc---CCceeeeeeee-----e-----ecCceeeEE--eCCCCCeEEEEecC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAH---ASEKLGPIRKV-----V-----MSLRSNMVS--WNPMEAFVFTAANE   66 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~---~~~~~~~~~~~-----~-----~~~~v~~~~--~~~~~~~~~~~~~~   66 (198)
                      ++|.+++|+|++++|++++.||.|++||+.   +++.......+     .     +...+.++.  ++|++..+++ ++.
T Consensus       112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~  190 (437)
T 3gre_A          112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA-LTN  190 (437)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE-EET
T ss_pred             CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE-EeC
Confidence            579999999999999999999999999995   44433322211     1     233455555  5567777765 579


Q ss_pred             CccEEEEeccCCCCc--ccc--c-----------cCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEc---
Q psy8758          67 DFNLYSYDIRQLNSP--LNV--H-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYS---  127 (198)
Q Consensus        67 d~~i~~~d~~~~~~~--~~~--~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~s---  127 (198)
                      |+.|++||+++....  +..  |           .+..+++++.|+.|++||+++ .+++..+. .|..+|.+++|+   
T Consensus       191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~  269 (437)
T 3gre_A          191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFY  269 (437)
T ss_dssp             TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTT
T ss_pred             CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEecccc
Confidence            999999999865432  222  2           234689999999999999998 67777775 778899999665   


Q ss_pred             -cCCCEEEEeecCCcEEEEEcCCCceeeEEec-------------------------cCcccEEEEEEcCCCCEEEEecC
Q psy8758         128 -PTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-------------------------KRMQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       128 -p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-------------------------~~~~~v~~~~~s~~~~~l~~~~~  181 (198)
                       |++++|++++.|+.|++||+++++....+..                         .|...|.+++|+ ++++|++++.
T Consensus       270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~  348 (437)
T 3gre_A          270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA  348 (437)
T ss_dssp             CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG
T ss_pred             CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCC
Confidence             4677999999999999999999887766631                         166779999999 7799999999


Q ss_pred             CCeEEEEecCCCccc
Q psy8758         182 EMNLRVWKAHASEKL  196 (198)
Q Consensus       182 dg~v~~w~~~~~~~~  196 (198)
                      |+.|++||+.+++.+
T Consensus       349 d~~i~~wd~~~~~~~  363 (437)
T 3gre_A          349 TSSIVMFSLNELSSS  363 (437)
T ss_dssp             GTEEEEEETTCGGGC
T ss_pred             CCeEEEEECCCcccc
Confidence            999999999998765

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.97  E-value=4.4e-29  Score=184.17  Aligned_cols=190  Identities=14%  Similarity=0.297  Sum_probs=156.3

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~   81 (198)
                      ++.|+||++ +.|++|. |++|+|||..+++....+....|...|++++|+|+++++++ |+.|+.|++||+++...  .
T Consensus       108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las-gs~Dg~v~iWd~~~~~~~~~  184 (420)
T 4gga_A          108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTSSAEVQLWDVQQQKRLRN  184 (420)
T ss_dssp             CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEEEEE
T ss_pred             ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE-EECCCeEEEEEcCCCcEEEE
Confidence            567999975 5777664 89999999999987777766667778999999999998876 57999999999986543  2


Q ss_pred             ccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          82 LNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        82 ~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                      +..|.         +.++++++.|+.+++||.+.....+..+..|...+..+.++|+++++++++.|+.+++|+..+++.
T Consensus       185 ~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~  264 (420)
T 4gga_A          185 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG  264 (420)
T ss_dssp             ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred             EeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence            23333         356899999999999999886677788899999999999999999999999999999999987653


Q ss_pred             e---eEEeccCcccEEEEEEcCCCC-EEEE--ecCCCeEEEEecCCCccc
Q psy8758         153 R---DIYHTKRMQHVTHTVWSLDNK-FVIS--ASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       153 ~---~~~~~~~~~~v~~~~~s~~~~-~l~~--~~~dg~v~~w~~~~~~~~  196 (198)
                      .   ......|...|.+++|+|++. ++++  |+.|++|++||+.+++++
T Consensus       265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~  314 (420)
T 4gga_A          265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL  314 (420)
T ss_dssp             CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred             cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence            2   222367888999999999765 5554  468999999999998764

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=1.6e-29  Score=185.40  Aligned_cols=190  Identities=15%  Similarity=0.180  Sum_probs=152.2

Q ss_pred             eeEEEECCCCceE-EEeeCCCeEEEEEccCCcee-eeeee-eeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCC
Q psy8758           4 VTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKL-GPIRK-VVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         4 v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~-~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ...++++|+...+ ++++.||.|++|++...... ..+.. ..|...|.+++|+| ++..+++ ++.|+.|++||+....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s-~s~dg~v~vw~~~~~~  115 (402)
T 2aq5_A           37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIAS-GSEDCTVMVWEIPDGG  115 (402)
T ss_dssp             SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEE-EETTSEEEEEECCTTC
T ss_pred             CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEE-EeCCCeEEEEEccCCC
Confidence            3457888877644 45788999999999654221 22222 23688999999999 7776665 5799999999998652


Q ss_pred             ---------Ccccccc----------C--ceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEe
Q psy8758          80 ---------SPLNVHK----------D--MTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        80 ---------~~~~~~~----------~--~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                               ..+..|.          .  .++++++.|+.|++||+++ ++.+..+  ..|...|.+++|+|++++|+++
T Consensus       116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  194 (402)
T 2aq5_A          116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GAAVLTLGPDVHPDTIYSVDWSRDGALICTS  194 (402)
T ss_dssp             CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred             CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence                     1222232          2  4799999999999999998 6777788  7899999999999999999999


Q ss_pred             ecCCcEEEEEcCCCceeeEEeccCccc-EEEEEEcCCCCEEEEe---cCCCeEEEEecCCCcc
Q psy8758         137 GYDKSLRLYLAHQGHSRDIYHTKRMQH-VTHTVWSLDNKFVISA---SDEMNLRVWKAHASEK  195 (198)
Q Consensus       137 ~~d~~v~v~d~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~---~~dg~v~~w~~~~~~~  195 (198)
                      +.|+.|++||+++++.+..+...|... +..+.|+|++++|+++   +.|+.|++||+++++.
T Consensus       195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~  257 (402)
T 2aq5_A          195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE  257 (402)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred             ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence            999999999999998887774566654 8999999999999998   7999999999988664

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.97  E-value=6.3e-29  Score=185.25  Aligned_cols=184  Identities=19%  Similarity=0.287  Sum_probs=151.3

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~   81 (198)
                      +.++.+  +++++++|+.||.|++||+.+++....+..  |...|.+++|+|++ .+ ++|+.|+.|++||+++...  .
T Consensus       125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~-~l-~s~s~dg~i~vwd~~~~~~~~~  198 (464)
T 3v7d_B          125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGG-IL-VSGSTDRTVRVWDIKKGCCTHV  198 (464)
T ss_dssp             EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSTT-EE-EEEETTSCEEEEETTTTEEEEE
T ss_pred             EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeC--CCcCEEEEEEcCCC-EE-EEEeCCCCEEEEECCCCcEEEE
Confidence            455555  578999999999999999998887666654  68889999999987 44 4567999999999986532  1


Q ss_pred             cccc-------------cCceEEEecCCCcEEEEEccCCCcc----------------------eeeecCCCcceEEEEE
Q psy8758          82 LNVH-------------KDMTSAAANEDFNLYSYDIRQLNSP----------------------LNVHKDMTSAVTSVDY  126 (198)
Q Consensus        82 ~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~----------------------~~~~~~~~~~i~~~~~  126 (198)
                      +..|             ....+++++.|+.|++||+++....                      ...+.+|...+.++  
T Consensus       199 ~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--  276 (464)
T 3v7d_B          199 FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--  276 (464)
T ss_dssp             ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--
T ss_pred             ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--
Confidence            2222             3357999999999999999863221                      44566788878776  


Q ss_pred             ccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         127 SPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +|+++++++++.|+.|++||+++++.+..+ .+|...|.+++|+|+++++++++.||.|++||+++++++
T Consensus       277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~  345 (464)
T 3v7d_B          277 SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM  345 (464)
T ss_dssp             EEETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence            678999999999999999999999988877 678899999999999999999999999999999998765

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=3.3e-29  Score=176.81  Aligned_cols=183  Identities=9%  Similarity=0.137  Sum_probs=128.7

Q ss_pred             cceeEEEECCC----CceEEEeeC--------------------CCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCC-
Q psy8758           2 QHVTHTVWSLD----NKFVISASD--------------------EMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNP-   55 (198)
Q Consensus         2 ~~v~~~~~s~~----~~~l~~~~~--------------------d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~-   55 (198)
                      +.|+.++|+|+    ++++++++.                    |+.|++|++. +++....+..  |...+..++|+| 
T Consensus       112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~--~~~~v~~l~fs~~  189 (356)
T 2w18_A          112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL--MPPEETILTFAEV  189 (356)
T ss_dssp             EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE--CCCSSCEEEEEEE
T ss_pred             cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeecc--CCCceeeEEeecc
Confidence            36888999999    777777653                    7888888884 4554444443  456677888888 


Q ss_pred             --CCCeEEEEecCCccEEEEeccCCC--Ccccccc--------------Cce------------EEEecCCCcEEEEEcc
Q psy8758          56 --MEAFVFTAANEDFNLYSYDIRQLN--SPLNVHK--------------DMT------------SAAANEDFNLYSYDIR  105 (198)
Q Consensus        56 --~~~~~~~~~~~d~~i~~~d~~~~~--~~~~~~~--------------~~~------------~~~~~~~~~i~~~d~~  105 (198)
                        +++.+++ ++.|++|++||+++.+  ..+..|.              +.+            +++|+.|+++++||..
T Consensus       190 ~g~~~~LaS-gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~  268 (356)
T 2w18_A          190 QGMQEALLG-TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK  268 (356)
T ss_dssp             ETSTTEEEE-EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred             CCCCceEEE-ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence              5566665 5799999999998765  2232221              111            3678899999999998


Q ss_pred             CCCcceeee-----cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccE-EEEEEcCCCCEEEEe
Q psy8758         106 QLNSPLNVH-----KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV-THTVWSLDNKFVISA  179 (198)
Q Consensus       106 ~~~~~~~~~-----~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~  179 (198)
                      + ++.+..+     .+|...+.+..+  ++.++++++.|++|+|||+.+++++..+ .+|...+ ..++|+|||++|++|
T Consensus       269 t-gk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL-~gH~~~vvs~vafSPDG~~LaSG  344 (356)
T 2w18_A          269 T-TLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALL-PPVSDQHWSFVKWSGTDSHLLAG  344 (356)
T ss_dssp             T-TEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEE-CCC--CCCCEEEECSSSSEEEEE
T ss_pred             C-CEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEe-cCCCCCeEEEEEECCCCCEEEEE
Confidence            7 5655443     355555444444  4789999999999999999999999887 5666554 468999999999999


Q ss_pred             cCCCeEEEEecC
Q psy8758         180 SDEMNLRVWKAH  191 (198)
Q Consensus       180 ~~dg~v~~w~~~  191 (198)
                      +.|++|+|||+.
T Consensus       345 S~D~TIklWd~~  356 (356)
T 2w18_A          345 QKDGNIFVYHYS  356 (356)
T ss_dssp             CTTSCEEEEEEC
T ss_pred             ECCCcEEEecCC
Confidence            999999999963

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.97  E-value=4.5e-29  Score=191.40  Aligned_cols=187  Identities=13%  Similarity=0.143  Sum_probs=155.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCC----ceeeeeeeeeecCc-eeeEEeCC--CCCeEEEEecCCccEEEEe
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS----EKLGPIRKVVMSLR-SNMVSWNP--MEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~d~~i~~~d   74 (198)
                      +.|.+++|+|+|++|++++ ++.+++|++.++    +....+..  |... |.+++|+|  +++++++ ++.|+.|++||
T Consensus        19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s-~~~dg~v~vw~   94 (615)
T 1pgu_A           19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG--HGSSVVTTVKFSPIKGSQYLCS-GDESGKVIVWG   94 (615)
T ss_dssp             TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT--TTTSCEEEEEECSSTTCCEEEE-EETTSEEEEEE
T ss_pred             CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec--CCCceEEEEEECcCCCCCEEEE-ecCCCEEEEEe
Confidence            5689999999999999998 789999999877    55555443  5778 99999999  9998876 46899999999


Q ss_pred             ccCC--------C--Cccccc-----------cCceEEEecCC----CcEEEEEccCCCcceeeecCCCcceEEEEEccC
Q psy8758          75 IRQL--------N--SPLNVH-----------KDMTSAAANED----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT  129 (198)
Q Consensus        75 ~~~~--------~--~~~~~~-----------~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~  129 (198)
                      +.+.        .  ..+..|           .+..+++++.+    +.|++||.   ++.+..+..|...|.+++|+|+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~v~~~~~~~~  171 (615)
T 1pgu_A           95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS---GNSLGEVSGHSQRINACHLKQS  171 (615)
T ss_dssp             EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT---CCEEEECCSCSSCEEEEEECSS
T ss_pred             CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC---CCcceeeecCCccEEEEEECCC
Confidence            9633        1  122222           23457777766    68888983   4677888899999999999999


Q ss_pred             CC-EEEEeecCCcEEEEEcCCCceeeEEeccCcc---cEEEEEEcCC-CCEEEEecCCCeEEEEecCCCccc
Q psy8758         130 GR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ---HVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       130 ~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~---~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++ .+++++.|+.|++||+.+++....+ .+|..   .|.+++|+|+ +++|++++.||.|++||+++++.+
T Consensus       172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~  242 (615)
T 1pgu_A          172 RPMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL  242 (615)
T ss_dssp             SSCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred             CCcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence            98 8999999999999999999888776 57877   8999999999 999999999999999999988764

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=6.5e-29  Score=180.25  Aligned_cols=148  Identities=11%  Similarity=0.093  Sum_probs=112.1

Q ss_pred             eeeEEeCCCCCeEEEE-ecCCccEEEEeccCCCCccc-----------cc-cCceEEEecCCCcEEEEEccCCCcce-ee
Q psy8758          48 SNMVSWNPMEAFVFTA-ANEDFNLYSYDIRQLNSPLN-----------VH-KDMTSAAANEDFNLYSYDIRQLNSPL-NV  113 (198)
Q Consensus        48 v~~~~~~~~~~~~~~~-~~~d~~i~~~d~~~~~~~~~-----------~~-~~~~~~~~~~~~~i~~~d~~~~~~~~-~~  113 (198)
                      +..++|+||+++++++ ++.|+.|++||+++......           .. .+..+++++ ++.+.+|+..+..... ..
T Consensus       136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~  214 (365)
T 4h5i_A          136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKT  214 (365)
T ss_dssp             EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEEC
T ss_pred             EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeee
Confidence            5678999999998654 45789999999986543221           11 234566666 4556666666522222 23


Q ss_pred             ecCCCcceEEEEEccCCCEEEEeecCC----cEEEEEcCCCceeeE---EeccCcccEEEEEEcCCCCEEEEecCCCeEE
Q psy8758         114 HKDMTSAVTSVDYSPTGREFVAGGYDK----SLRLYLAHQGHSRDI---YHTKRMQHVTHTVWSLDNKFVISASDEMNLR  186 (198)
Q Consensus       114 ~~~~~~~i~~~~~sp~~~~l~~~~~d~----~v~v~d~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~  186 (198)
                      ...|...+.+++|+|+++++++++.|+    .+++|++........   ...+|...|++++|+|||++||+|+.|+.|+
T Consensus       215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~  294 (365)
T 4h5i_A          215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA  294 (365)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred             cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence            456888999999999999999999887    688899887654321   2357888999999999999999999999999


Q ss_pred             EEecCCCccc
Q psy8758         187 VWKAHASEKL  196 (198)
Q Consensus       187 ~w~~~~~~~~  196 (198)
                      |||+++++++
T Consensus       295 iwd~~~~~~~  304 (365)
T 4h5i_A          295 LVKLKDLSMS  304 (365)
T ss_dssp             EEETTTTEEE
T ss_pred             EEECCCCcEE
Confidence            9999998865

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.97  E-value=1e-28  Score=177.08  Aligned_cols=188  Identities=11%  Similarity=0.039  Sum_probs=151.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceee-eeeeeeecCceeeEEeCCCCC-eEEEEecCCccEEEEec-cCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG-PIRKVVMSLRSNMVSWNPMEA-FVFTAANEDFNLYSYDI-RQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~d~~i~~~d~-~~~   78 (198)
                      +.|++++|+|++++|++++.|+.|++|++.+++... ......+...|.+++|+|+++ .+++ ++.|+.|++||+ ...
T Consensus        12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~   90 (342)
T 1yfq_A           12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV-GTVQGEILKVDLIGSP   90 (342)
T ss_dssp             SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEE-EETTSCEEEECSSSSS
T ss_pred             CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEE-EcCCCeEEEEEeccCC
Confidence            579999999999999999999999999998776211 122224678899999999999 7766 568999999999 644


Q ss_pred             CC-cccc--c----------cCceEEEecCCCcEEEEEccCC--------CcceeeecCCCcceEEEEEccCCCEEEEee
Q psy8758          79 NS-PLNV--H----------KDMTSAAANEDFNLYSYDIRQL--------NSPLNVHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        79 ~~-~~~~--~----------~~~~~~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                      .. .+..  |          ++..+++++.|+.|++||+++.        .+++..+. |...+.+++|+|++  +++++
T Consensus        91 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~  167 (342)
T 1yfq_A           91 SFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGM  167 (342)
T ss_dssp             SEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEE
T ss_pred             ceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEe
Confidence            31 1222  2          2567899999999999998751        23444454 88899999999987  99999


Q ss_pred             cCCcEEEEEcCC-Cce-eeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCC
Q psy8758         138 YDKSLRLYLAHQ-GHS-RDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       138 ~d~~v~v~d~~~-~~~-~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .|+.|++||+++ +.. .......|...+.+++|+| +++++++++.||.|++|+++.+
T Consensus       168 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~  226 (342)
T 1yfq_A          168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ  226 (342)
T ss_dssp             STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred             CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence            999999999998 554 3333457778999999999 9999999999999999999876

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.97  E-value=3.3e-28  Score=180.21  Aligned_cols=180  Identities=18%  Similarity=0.315  Sum_probs=152.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|.+++|  +++++++|+.||.|++||+.+++....+..  |...|.+++|++  ..++ +++.|+.|++||+++....
T Consensus       174 ~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~--~~l~-s~s~dg~i~vwd~~~~~~~  246 (435)
T 1p22_A          174 GSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH--HCEAVLHLRFNN--GMMV-TCSKDRSIAVWDMASPTDI  246 (435)
T ss_dssp             SCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC--CCSCEEEEECCT--TEEE-EEETTSCEEEEECSSSSCC
T ss_pred             CcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC--CCCcEEEEEEcC--CEEE-EeeCCCcEEEEeCCCCCCc
Confidence            46888888  788999999999999999998887666654  577899999975  3554 4679999999999865432


Q ss_pred             -----ccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          82 -----LNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        82 -----~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                           +..|.         +..+++++.|+.|++||+++ .+.+..+..|...+.++++  +++++++++.|+.|++||+
T Consensus       247 ~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~  323 (435)
T 1p22_A          247 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI  323 (435)
T ss_dssp             EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred             eeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence                 22332         34689999999999999998 6888889999999999999  4689999999999999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ++++.+..+ .+|...|.+++|  ++++|++++.||.|++||+.+++
T Consensus       324 ~~~~~~~~~-~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~  367 (435)
T 1p22_A          324 ECGACLRVL-EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL  367 (435)
T ss_dssp             TTCCEEEEE-CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred             CCCCEEEEE-eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence            999988877 678899999999  78899999999999999997654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2e-28  Score=176.25  Aligned_cols=186  Identities=12%  Similarity=0.032  Sum_probs=139.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccC---------CceeeeeeeeeecCceeeEEeCC--CCCeEEEEecCCccE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA---------SEKLGPIRKVVMSLRSNMVSWNP--MEAFVFTAANEDFNL   70 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~d~~i   70 (198)
                      +.|.++.|+|+   +++++.|+.+++|+...         ++...... ..+...|.+++|+|  +++++++ ++.|+.|
T Consensus        77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s-~s~dg~i  151 (343)
T 3lrv_A           77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE-VDSANEIIYMYGHNEVNTEYFIW-ADNRGTI  151 (343)
T ss_dssp             ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE-CCCSSCEEEEECCC---CCEEEE-EETTCCE
T ss_pred             CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee-cCCCCCEEEEEcCCCCCCCEEEE-EeCCCcE
Confidence            35677788888   99999999999997652         22222222 12457799999999  8888876 4699999


Q ss_pred             EEEeccCCCCcc-------------ccc-cCceEEEecCCCcEEEEEccCCCcce-eeecC-CCcceEEEEEccCCCEEE
Q psy8758          71 YSYDIRQLNSPL-------------NVH-KDMTSAAANEDFNLYSYDIRQLNSPL-NVHKD-MTSAVTSVDYSPTGREFV  134 (198)
Q Consensus        71 ~~~d~~~~~~~~-------------~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~-~~~~i~~~~~sp~~~~l~  134 (198)
                      ++||+++.....             ..+ .+.++++|+.|+.|++||+++ .+.+ ..+.. |..+|++++|+|++++|+
T Consensus       152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~l~  230 (343)
T 3lrv_A          152 GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYWMV  230 (343)
T ss_dssp             EEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred             EEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence            999998654311             111 235788999999999999998 4554 67777 999999999999999999


Q ss_pred             EeecCCcEEEEEcCCCceeeEEe--ccCcccE--EEEEEcCCCCEEEEecC-CCeEEEEecCCCc
Q psy8758         135 AGGYDKSLRLYLAHQGHSRDIYH--TKRMQHV--THTVWSLDNKFVISASD-EMNLRVWKAHASE  194 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~~~~~~~~--~~~~~~v--~~~~~s~~~~~l~~~~~-dg~v~~w~~~~~~  194 (198)
                      +++ |+.|++||+++++....+.  ..|...+  .+++|+|+|++|++++. |+.+++|++.++.
T Consensus       231 s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~  294 (343)
T 3lrv_A          231 VEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT  294 (343)
T ss_dssp             EEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             EEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence            999 5599999999987654331  1232333  36999999999999888 9999999986553

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.7e-29  Score=185.76  Aligned_cols=184  Identities=11%  Similarity=0.129  Sum_probs=141.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-----------------------------eeeeeeeecCceeeEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-----------------------------GPIRKVVMSLRSNMVS   52 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-----------------------------~~~~~~~~~~~v~~~~   52 (198)
                      ..|.+++|||||+++|+++.|++|+  |...++.+                             ..+ ...+...|.+++
T Consensus        16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~-~~~~~~~V~~va   92 (588)
T 2j04_A           16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLL-NSQPVCYPRVCK   92 (588)
T ss_dssp             SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSS-TTSCSCCEEEEE
T ss_pred             ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEe-ecCCCCcEEEEE
Confidence            3588999999999999999999996  43332211                             111 112356799999


Q ss_pred             eCCCCCeEEEEecCCccEEEEeccCCCCccc---------------cccCceEEEecCCCcEEEEEccCCCc-------c
Q psy8758          53 WNPMEAFVFTAANEDFNLYSYDIRQLNSPLN---------------VHKDMTSAAANEDFNLYSYDIRQLNS-------P  110 (198)
Q Consensus        53 ~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~-------~  110 (198)
                      |+|+|..++++ +.||.+++||.......+.               ...+..+++++.||+|++||+.. +.       .
T Consensus        93 wSPdG~~LAs~-s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~-~~l~~~~~i~  170 (588)
T 2j04_A           93 PSPIDDWMAVL-SNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK-NSENTPEFYF  170 (588)
T ss_dssp             ECSSSSCEEEE-ETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC-CTTTCCCCEE
T ss_pred             ECCCCCEEEEE-eCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC-Ccccccccee
Confidence            99999999875 6999999999432111111               12345799999999999999987 33       2


Q ss_pred             eeee----cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCcee---eEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         111 LNVH----KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR---DIYHTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       111 ~~~~----~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                      +..+    .+|...|.+++|+|+|  +++++.|++|++||+..+...   ..+..+|...|.+++|+  |+.||+++ ++
T Consensus       171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~  245 (588)
T 2j04_A          171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG  245 (588)
T ss_dssp             EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred             eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence            4555    5677899999999999  888899999999999887743   33434787899999999  68899887 69


Q ss_pred             eEEEEecCCCcc
Q psy8758         184 NLRVWKAHASEK  195 (198)
Q Consensus       184 ~v~~w~~~~~~~  195 (198)
                      .|++||+.+++.
T Consensus       246 tIkLWd~~~~~~  257 (588)
T 2j04_A          246 YVHKIDLKNYSI  257 (588)
T ss_dssp             EEEEEETTTTEE
T ss_pred             eEEEEECCCCeE
Confidence            999999998775

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.97  E-value=1.7e-27  Score=176.47  Aligned_cols=181  Identities=14%  Similarity=0.264  Sum_probs=150.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--   80 (198)
                      .|.+++|  +++++++|+.||.|++||+.+++....+..  |...|.+++|  +++.+++ |+.||.|++||+.+...  
T Consensus       135 ~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~--~~~~l~s-g~~dg~i~vwd~~~~~~~~  207 (435)
T 1p22_A          135 GVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG--HTGSVLCLQY--DERVIIT-GSSDSTVRVWDVNTGEMLN  207 (435)
T ss_dssp             CEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECC--CSSCEEEEEC--CSSEEEE-EETTSCEEEEESSSCCEEE
T ss_pred             cEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcC--CCCcEEEEEE--CCCEEEE-EcCCCeEEEEECCCCcEEE
Confidence            4667666  799999999999999999998887666654  5778999998  5666655 67999999999986542  


Q ss_pred             cccccc---------CceEEEecCCCcEEEEEccCCCcce---eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          81 PLNVHK---------DMTSAAANEDFNLYSYDIRQLNSPL---NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        81 ~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      .+..|.         +..+++++.|+.|++||+++ ....   ..+.+|...+.+++|  +++++++++.|+.|++||++
T Consensus       208 ~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~  284 (435)
T 1p22_A          208 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS-PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS  284 (435)
T ss_dssp             EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSS-SSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred             EEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCC-CCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence            222222         34789999999999999987 3333   567789999999999  78899999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++.+..+ .+|...|.++.|  +++++++++.||.|++||+++++++
T Consensus       285 ~~~~~~~~-~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~  329 (435)
T 1p22_A          285 TCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACL  329 (435)
T ss_dssp             TCCEEEEE-ECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred             cCcEEEEE-cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence            99988877 578899999998  4679999999999999999988765

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.96  E-value=6e-28  Score=180.27  Aligned_cols=180  Identities=14%  Similarity=0.128  Sum_probs=143.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee---cCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM---SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      ..|.+++|||+|++||+++.||.+++||.+.  ....+. +..   ...+.+++|+|+|+.|+++ +.||+|++||+...
T Consensus        86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg-s~DGtVkIWd~~~~  161 (588)
T 2j04_A           86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG-NEDGELQFFSIRKN  161 (588)
T ss_dssp             CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE-ETTSEEEEEECCCC
T ss_pred             CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEE-cCCCEEEEEECCCC
Confidence            4699999999999999999999999999543  333332 210   2258999999999999875 69999999998865


Q ss_pred             CC---------cc----ccc----------cCceEEEecCCCcEEEEEccCCCc--ceeee-cCCCcceEEEEEccCCCE
Q psy8758          79 NS---------PL----NVH----------KDMTSAAANEDFNLYSYDIRQLNS--PLNVH-KDMTSAVTSVDYSPTGRE  132 (198)
Q Consensus        79 ~~---------~~----~~~----------~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~-~~~~~~i~~~~~sp~~~~  132 (198)
                      ..         .+    .+|          ++. +++++.|+.+++||+.....  ....+ ..|...|.+++|+  |+.
T Consensus       162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~  238 (588)
T 2j04_A          162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYK  238 (588)
T ss_dssp             TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTE
T ss_pred             ccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCE
Confidence            31         11    222          234 88999999999999987321  22445 4788899999999  688


Q ss_pred             EEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEE--cCCCCEEEEecCCCeEEEEecC
Q psy8758         133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW--SLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ||+++ +++|++||+..++..... .+|...+..++|  +|+++.++++++||+ ++|..+
T Consensus       239 LASa~-~~tIkLWd~~~~~~~~~~-~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          239 VVLTC-PGYVHKIDLKNYSISSLK-TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             EEEEC-SSEEEEEETTTTEEEEEE-CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             EEEEe-CCeEEEEECCCCeEEEEE-cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence            98887 699999999988775443 379999999999  999999999999999 999875

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=1e-26  Score=169.72  Aligned_cols=188  Identities=10%  Similarity=0.029  Sum_probs=150.8

Q ss_pred             cceeEEEECCCCceE-EEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..+.+++|+|+++++ ++++.|+.|++||+.+++....+..   ...+.+++|+|+++.++++++.++.|++||+.+...
T Consensus        32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~---~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~  108 (391)
T 1l0q_A           32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA---GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV  108 (391)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC---CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence            357899999999976 5667899999999988876555443   447899999999999988887889999999986542


Q ss_pred             cc-----------c--cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEE-EEeecCCcEEEEE
Q psy8758          81 PL-----------N--VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYL  146 (198)
Q Consensus        81 ~~-----------~--~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~d~~v~v~d  146 (198)
                      ..           .  .....++++++.++.|++||+.+ ++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||
T Consensus       109 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d  186 (391)
T 1l0q_A          109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVID  186 (391)
T ss_dssp             EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence            11           1  11223457888999999999987 5666666654 456999999999977 5777899999999


Q ss_pred             cCCCceeeEEeccCcccEEEEEEcCCCCEEEEec---CCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS---DEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~v~~w~~~~~~~~  196 (198)
                      +++++....+  .+...+.+++|+|++++|++++   .++.|++||+++++.+
T Consensus       187 ~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~  237 (391)
T 1l0q_A          187 TVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT  237 (391)
T ss_dssp             TTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred             CCCCeEEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence            9999887766  3446889999999999988877   6899999999988754

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.96  E-value=3.9e-27  Score=174.91  Aligned_cols=177  Identities=20%  Similarity=0.318  Sum_probs=149.8

Q ss_pred             ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--cccccc
Q psy8758           9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--PLNVHK   86 (198)
Q Consensus         9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~~~~~   86 (198)
                      ++++|+++++|+.||.|++||+.+++....+..  |...|.+++|+  +..+++ ++.|+.|++||+.+...  .+..|.
T Consensus       125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s-~~~dg~i~vwd~~~~~~~~~~~~h~  199 (445)
T 2ovr_B          125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--HTGGVWSSQMR--DNIIIS-GSTDRTLKVWNAETGECIHTLYGHT  199 (445)
T ss_dssp             EEEETTEEEEEETTSCEEEEETTTCCEEEECCC--CSSCEEEEEEE--TTEEEE-EETTSCEEEEETTTTEEEEEECCCS
T ss_pred             EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC--CCCCEEEEEec--CCEEEE-EeCCCeEEEEECCcCcEEEEECCCC
Confidence            455789999999999999999998887666654  57889999997  345554 67999999999976542  222333


Q ss_pred             ---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758          87 ---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        87 ---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~  157 (198)
                               +..+++++.|+.|++||+++ ++.+..+..|...+.+++|  +++++++++.|+.|++||+++++.+..+ 
T Consensus       200 ~~v~~~~~~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~-  275 (445)
T 2ovr_B          200 STVRCMHLHEKRVVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-  275 (445)
T ss_dssp             SCEEEEEEETTEEEEEETTSEEEEEESSS-CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEE-
T ss_pred             CcEEEEEecCCEEEEEeCCCEEEEEECCC-CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEe-
Confidence                     34689999999999999998 6788888899999999999  7889999999999999999999888877 


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+|...|.+++|  +++++++++.||.|++||+++++.+
T Consensus       276 ~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~  312 (445)
T 2ovr_B          276 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI  312 (445)
T ss_dssp             CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred             cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence            678899999999  7889999999999999999988764

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.3e-26  Score=184.88  Aligned_cols=182  Identities=13%  Similarity=0.136  Sum_probs=144.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-   80 (198)
                      .+|.+++|+| |++|++++.|+.|++||+.+++....+.   +...|.+++|+|+++++++ |+.|+.|++||+++... 
T Consensus        59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~---~~~~V~~v~~sp~g~~l~s-gs~dg~V~lwd~~~~~~~  133 (902)
T 2oaj_A           59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF---VPGKITSIDTDASLDWMLI-GLQNGSMIVYDIDRDQLS  133 (902)
T ss_dssp             CCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE---CSSCEEEEECCTTCSEEEE-EETTSCEEEEETTTTEEE
T ss_pred             CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEE-EcCCCcEEEEECCCCccc
Confidence            4699999999 8899999999999999999887665553   5678999999999999876 57999999999976431 


Q ss_pred             ------------ccccc----------c--CceEEEecCCCcEEEEEccCCCcceeeecCC------------------C
Q psy8758          81 ------------PLNVH----------K--DMTSAAANEDFNLYSYDIRQLNSPLNVHKDM------------------T  118 (198)
Q Consensus        81 ------------~~~~~----------~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------------------~  118 (198)
                                  ....|          +  ...+++++.|+.+ +||+++ .+++..+..|                  .
T Consensus       134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~  211 (902)
T 2oaj_A          134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRT  211 (902)
T ss_dssp             EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred             cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccC
Confidence                        11122          1  2578899999999 999998 5666666544                  4


Q ss_pred             cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe----c-------------cCcccEEEEEEc----CCC-CEE
Q psy8758         119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH----T-------------KRMQHVTHTVWS----LDN-KFV  176 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~----~-------------~~~~~v~~~~~s----~~~-~~l  176 (198)
                      ..|.+++|+|+|++|++++.|+.|++||+++++++....    .             .|...|.+++|+    |++ .+|
T Consensus       212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll  291 (902)
T 2oaj_A          212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLL  291 (902)
T ss_dssp             CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEE
T ss_pred             CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEE
Confidence            679999999999999999999999999999988765311    0             134579999995    443 567


Q ss_pred             EEecCC-----CeEEEEec
Q psy8758         177 ISASDE-----MNLRVWKA  190 (198)
Q Consensus       177 ~~~~~d-----g~v~~w~~  190 (198)
                      ++++.|     ..+.+|++
T Consensus       292 ~sg~~~~~~~~~~v~~~~~  310 (902)
T 2oaj_A          292 ISHKSISRGDNQSLTMIDL  310 (902)
T ss_dssp             EEEECSTTSSCCCEEEEEE
T ss_pred             EeCCCCCCCCCceEEEEec
Confidence            777665     37888885

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=6e-26  Score=165.65  Aligned_cols=187  Identities=13%  Similarity=0.089  Sum_probs=148.5

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+.+++|+|++++++++ +.++.|++||+.+++....+.   +...+.+++|+|+++.++++++.++.|++||+.+....
T Consensus        75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  151 (391)
T 1l0q_A           75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI  151 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence            57899999999987654 467999999999887654443   34568999999999999777888999999998764321


Q ss_pred             --c-----------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee---cCCcEEEE
Q psy8758          82 --L-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG---YDKSLRLY  145 (198)
Q Consensus        82 --~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~d~~v~v~  145 (198)
                        +           ......+++++..++.|++||+++ .+....+. +...+.+++|+|+++++++++   .++.|++|
T Consensus       152 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~  229 (391)
T 1l0q_A          152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI  229 (391)
T ss_dssp             EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred             EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence              1           111223457888999999999987 55555554 456789999999999998887   68999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEE-EEecCCCeEEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |+.+++.+..+.. + ..+.+++|+|++++| ++++.|+.|++||+.+++.+
T Consensus       230 d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~  279 (391)
T 1l0q_A          230 DTGTNKITARIPV-G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT  279 (391)
T ss_dssp             ETTTTEEEEEEEC-C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             ECCCCeEEEEEec-C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence            9999988777633 3 468899999999977 56788999999999988764

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.96  E-value=3.3e-26  Score=169.89  Aligned_cols=182  Identities=18%  Similarity=0.192  Sum_probs=150.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+|.+++|  +++++++++.||.|++||+.+++....+..  |...+.++.|  ++..+++ ++.|+.|++||+++....
T Consensus       240 ~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~-~~~d~~i~i~d~~~~~~~  312 (445)
T 2ovr_B          240 AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG--HTNRVYSLQF--DGIHVVS-GSLDTSIRVWDVETGNCI  312 (445)
T ss_dssp             SCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC--CSSCEEEEEE--CSSEEEE-EETTSCEEEEETTTCCEE
T ss_pred             ccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC--CCCceEEEEE--CCCEEEE-EeCCCeEEEEECCCCCEE
Confidence            46788888  788999999999999999988876666553  5678899998  6677765 568999999999865432


Q ss_pred             --cccc---------cCceEEEecCCCcEEEEEccCCCcceeeecC---CCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758          82 --LNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLA  147 (198)
Q Consensus        82 --~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~  147 (198)
                        +..|         .+..+++++.|+.|++||+++ ++++..+..   |...|.+++|+  ++++++++.||.|++||+
T Consensus       313 ~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~  389 (445)
T 2ovr_B          313 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL  389 (445)
T ss_dssp             EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred             EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence              2222         234789999999999999988 677777765   78899999996  579999999999999999


Q ss_pred             CCCceeeEEe----ccCcccEEEEEEcCCCCEEEEecCCCe----EEEEecCCC
Q psy8758         148 HQGHSRDIYH----TKRMQHVTHTVWSLDNKFVISASDEMN----LRVWKAHAS  193 (198)
Q Consensus       148 ~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~----v~~w~~~~~  193 (198)
                      .+++.+..+.    .+|...|++++|+|++.++++++.||.    +.+||++..
T Consensus       390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          390 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            9998877662    366789999999999999999999997    999999753

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=2.3e-26  Score=166.31  Aligned_cols=189  Identities=7%  Similarity=0.139  Sum_probs=142.7

Q ss_pred             ceeEEEECCCCceE-EEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCC------------------------
Q psy8758           3 HVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPME------------------------   57 (198)
Q Consensus         3 ~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------   57 (198)
                      .+..+++.++++.+ ++++.|+.|++||+.+++....+.   +...|.++.|+++.                        
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~  136 (355)
T 3vu4_A           60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK---VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDD  136 (355)
T ss_dssp             CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE---CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCC
T ss_pred             CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE---CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEe
Confidence            46678899988877 567788999999998887655443   35567777777642                        


Q ss_pred             -----------CeEEEE-ecCCccEEEEeccCCC------------------CccccccC-----------ceEEEecCC
Q psy8758          58 -----------AFVFTA-ANEDFNLYSYDIRQLN------------------SPLNVHKD-----------MTSAAANED   96 (198)
Q Consensus        58 -----------~~~~~~-~~~d~~i~~~d~~~~~------------------~~~~~~~~-----------~~~~~~~~~   96 (198)
                                 ..++++ |+.+|.|++||++...                  ..+..|..           ..+++++.|
T Consensus       137 ~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d  216 (355)
T 3vu4_A          137 IRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD  216 (355)
T ss_dssp             EEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC
Confidence                       234443 6788999999988632                  23444433           469999999


Q ss_pred             Cc-EEEEEccCCCcceeeec-C-CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE------------------
Q psy8758          97 FN-LYSYDIRQLNSPLNVHK-D-MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI------------------  155 (198)
Q Consensus        97 ~~-i~~~d~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~------------------  155 (198)
                      ++ |++||+++ ++.+..+. + |...|.+++|+|++++|++++.|++|++||++.+.....                  
T Consensus       217 ~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (355)
T 3vu4_A          217 GTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSL  295 (355)
T ss_dssp             CSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCS
T ss_pred             CCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccce
Confidence            98 99999998 67788887 5 999999999999999999999999999999986532111                  


Q ss_pred             ----EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         156 ----YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       156 ----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                          +..........++|+|++++|++++.||.+++|++..++.
T Consensus       296 ~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~  339 (355)
T 3vu4_A          296 CNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE  339 (355)
T ss_dssp             EEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred             eEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence                0011112346689999999999999999999999876543

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.95  E-value=3.3e-27  Score=172.89  Aligned_cols=186  Identities=8%  Similarity=0.046  Sum_probs=123.5

Q ss_pred             EECCCCceEEEeeCCCeEEEEEccCCceeee--eeee-eecCceeeEEeCC--------CCCeEEEEecCCccEEEEecc
Q psy8758           8 VWSLDNKFVISASDEMNLRVWKAHASEKLGP--IRKV-VMSLRSNMVSWNP--------MEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~-~~~~~v~~~~~~~--------~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .++++++++++++.|++|+|||..+++....  +... .|...|.+++|+|        +++.|++ ++.|++|++||++
T Consensus        96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las-~s~D~tv~~Wd~~  174 (393)
T 4gq1_A           96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIAS-VGDDCTLIIWRLT  174 (393)
T ss_dssp             -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEE-EETTSEEEEEEEE
T ss_pred             ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEE-EECCCeEEEEECC
Confidence            3445667899999999999999988764322  2222 2788999999998        5566655 6799999999997


Q ss_pred             CCCCc------------cccc--cCceEEEecCCCcEEEEEccCCCccee-------------------------eecCC
Q psy8758          77 QLNSP------------LNVH--KDMTSAAANEDFNLYSYDIRQLNSPLN-------------------------VHKDM  117 (198)
Q Consensus        77 ~~~~~------------~~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~-------------------------~~~~~  117 (198)
                      +....            +..+  ....+++++.|++|++||+++. +...                         ...+|
T Consensus       175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  253 (393)
T 4gq1_A          175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN-LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI  253 (393)
T ss_dssp             TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC-C----------CSCCCSEEEESGGGC------CC
T ss_pred             CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC-cccccccccCCcccceEEecccccceeeeecccc
Confidence            54321            1222  2247999999999999999863 2211                         12356


Q ss_pred             CcceEEEEEc-cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEE------------------EEEcC--CCCEE
Q psy8758         118 TSAVTSVDYS-PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH------------------TVWSL--DNKFV  176 (198)
Q Consensus       118 ~~~i~~~~~s-p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~------------------~~~s~--~~~~l  176 (198)
                      ...+.++.|+ |+++.+++++.|+.+++||+..++....+ ..|...+..                  ..|+|  ++.++
T Consensus       254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (393)
T 4gq1_A          254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI-SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA  332 (393)
T ss_dssp             SSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred             cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE-eeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence            6778889986 79999999999999999999877654443 222222222                  23333  34467


Q ss_pred             EEecCCCeEEEEecCCCccc
Q psy8758         177 ISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       177 ~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++++.||.|++||+.+++.+
T Consensus       333 ~sgs~Dg~V~lwd~~~~~~~  352 (393)
T 4gq1_A          333 TAHSQHGLIQLINTYEKDSN  352 (393)
T ss_dssp             EEETTTTEEEEEETTCTTCC
T ss_pred             EEECCCCEEEEEECCCCcEE
Confidence            78899999999999988764

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.95  E-value=5.5e-27  Score=165.52  Aligned_cols=144  Identities=13%  Similarity=0.110  Sum_probs=110.8

Q ss_pred             ceeEEEECC---CCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEE-----------EEecCC
Q psy8758           3 HVTHTVWSL---DNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVF-----------TAANED   67 (198)
Q Consensus         3 ~v~~~~~s~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-----------~~~~~d   67 (198)
                      .++.++|+|   ++++|++++.|++|+|||+.+++.+..+..+. +...+.+++|+|++..++           ++|+.|
T Consensus       180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D  259 (356)
T 2w18_A          180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV  259 (356)
T ss_dssp             SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred             ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence            356677777   66789999999999999999999888876432 234567789999998774           457789


Q ss_pred             ccEEEEeccCCCCc--c-----ccccC---------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceE-EEEEccCC
Q psy8758          68 FNLYSYDIRQLNSP--L-----NVHKD---------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVT-SVDYSPTG  130 (198)
Q Consensus        68 ~~i~~~d~~~~~~~--~-----~~~~~---------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~-~~~~sp~~  130 (198)
                      +++++||..+.+..  +     .+|..         ..+++++.|++|++||+.+ ++.+.++++|...+. +++|+|||
T Consensus       260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG  338 (356)
T 2w18_A          260 FQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTD  338 (356)
T ss_dssp             EEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSS
T ss_pred             cEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCC
Confidence            99999998866421  1     23322         2578899999999999998 788999988877655 68999999


Q ss_pred             CEEEEeecCCcEEEEEc
Q psy8758         131 REFVAGGYDKSLRLYLA  147 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~  147 (198)
                      ++|++|+.|++|+|||+
T Consensus       339 ~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          339 SHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             SEEEEECTTSCEEEEEE
T ss_pred             CEEEEEECCCcEEEecC
Confidence            99999999999999996

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.95  E-value=2.2e-25  Score=164.67  Aligned_cols=189  Identities=10%  Similarity=0.064  Sum_probs=150.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|.+++|+|+++++++++.|+.|++||+.+++....+..  +...+.+++|+|+++.++++++.++.|++||+++....
T Consensus       170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~  247 (433)
T 3bws_A          170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL--TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI  247 (433)
T ss_dssp             CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC--SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC--CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence            3688999999999999999999999999988876655543  46678999999999999888778999999998754321


Q ss_pred             c-----------ccc-cCceEEEec--------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEE-EEeecCC
Q psy8758          82 L-----------NVH-KDMTSAAAN--------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDK  140 (198)
Q Consensus        82 ~-----------~~~-~~~~~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~d~  140 (198)
                      .           ... .+..+++++        .|+.|++||+++ ++.+..+ .+...+.+++|+|+++.+ ++++.|+
T Consensus       248 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~  325 (433)
T 3bws_A          248 RKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCS  325 (433)
T ss_dssp             EECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTT
T ss_pred             EEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCC
Confidence            1           111 223455555        588999999987 4554444 456688999999999755 6668899


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC---------------CCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD---------------EMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------dg~v~~w~~~~~~~~  196 (198)
                      .|++||+.+++....+  .+...+.+++|+|+++++++++.               ||.|++||+.+++.+
T Consensus       326 ~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~  394 (433)
T 3bws_A          326 KIEVYDLKEKKVQKSI--PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK  394 (433)
T ss_dssp             EEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred             EEEEEECCCCcEEEEe--cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence            9999999998887766  35578999999999998887765               579999999988764

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.94  E-value=2.9e-24  Score=158.71  Aligned_cols=184  Identities=9%  Similarity=0.063  Sum_probs=145.3

Q ss_pred             cceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec-------CCccEEEE
Q psy8758           2 QHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN-------EDFNLYSY   73 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~d~~i~~~   73 (198)
                      ..+.+++|+|++++++++ +.|+.|++||+.+++....+..   ...+.+++|+|+++.+++++.       .|+.|++|
T Consensus       212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~  288 (433)
T 3bws_A          212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY  288 (433)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred             CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence            357899999999988544 4799999999988776544433   455899999999999888653       58899999


Q ss_pred             eccCCCCc-------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec--
Q psy8758          74 DIRQLNSP-------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY--  138 (198)
Q Consensus        74 d~~~~~~~-------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--  138 (198)
                      |+++....             +......++++++.++.+++||+.+ ++.+..+. +...+.+++|+|+++++++++.  
T Consensus       289 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~  366 (433)
T 3bws_A          289 SMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGP  366 (433)
T ss_dssp             ETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCC
T ss_pred             ECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCC
Confidence            98764321             1111224677889999999999997 56666665 6677999999999998888776  


Q ss_pred             -------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCC
Q psy8758         139 -------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHA  192 (198)
Q Consensus       139 -------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~  192 (198)
                                   ||.|++||+.+++....+..  ...+.+++|+|+|++|++++ .|+.|++|+++.
T Consensus       367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             CccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence                         57999999999988877633  36799999999999988776 499999999864

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.94  E-value=1.4e-24  Score=154.05  Aligned_cols=148  Identities=15%  Similarity=0.240  Sum_probs=116.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee---------------------------------------e
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---------------------------------------V   42 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---------------------------------------~   42 (198)
                      ..|++++|+|+++++++|+.||.|++|++.+++....+..                                       .
T Consensus        68 ~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~  147 (318)
T 4ggc_A           68 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS  147 (318)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred             CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence            3589999999999999999999999999988765433221                                       1


Q ss_pred             eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc------ccc-----------------------c-------
Q psy8758          43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL------NVH-----------------------K-------   86 (198)
Q Consensus        43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~------~~~-----------------------~-------   86 (198)
                      .|...+..+.|+++++.+++ ++.|+.|++||+++.....      ..+                       .       
T Consensus       148 ~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw  226 (318)
T 4ggc_A          148 GHSQEVCGLRWAPDGRHLAS-GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW  226 (318)
T ss_dssp             CCSSCEEEEEECTTSSEEEE-EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred             CccCceEEEEEcCCCCEEEE-EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence            14556788889999998876 5699999999987543110      000                       0       


Q ss_pred             -------------------------Cc--eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC
Q psy8758          87 -------------------------DM--TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD  139 (198)
Q Consensus        87 -------------------------~~--~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d  139 (198)
                                               ..  ++++++.|+.|++||+++ ++++..+.+|...|++++|+|++++|++++.|
T Consensus       227 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D  305 (318)
T 4ggc_A          227 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAAD  305 (318)
T ss_dssp             ETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             ecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence                                     00  133456899999999998 78899999999999999999999999999999


Q ss_pred             CcEEEEEcCCCc
Q psy8758         140 KSLRLYLAHQGH  151 (198)
Q Consensus       140 ~~v~v~d~~~~~  151 (198)
                      ++|++||+.+..
T Consensus       306 ~~v~iWd~~~~d  317 (318)
T 4ggc_A          306 ETLRLWRCFELD  317 (318)
T ss_dssp             TEEEEECCSCCC
T ss_pred             CeEEEEECCCCC
Confidence            999999997653

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.93  E-value=7.1e-24  Score=151.70  Aligned_cols=152  Identities=13%  Similarity=0.163  Sum_probs=121.0

Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-------ccccccC-----------------------------
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-------PLNVHKD-----------------------------   87 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-------~~~~~~~-----------------------------   87 (198)
                      |.+.|++++|+|++..++++|+.|++|++||+.....       .+.+|..                             
T Consensus        37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~  116 (340)
T 4aow_A           37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT  116 (340)
T ss_dssp             CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence            7889999999998654455567999999999875432       1222221                             


Q ss_pred             ------------------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC--CEEEEeecCCc
Q psy8758          88 ------------------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG--REFVAGGYDKS  141 (198)
Q Consensus        88 ------------------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~d~~  141 (198)
                                              ..+++++.|+.+++||+............|...+..++|++++  .++++++.|+.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~  196 (340)
T 4aow_A          117 TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL  196 (340)
T ss_dssp             TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred             ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCE
Confidence                                    1266777777777887765334444556788899999999875  47889999999


Q ss_pred             EEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         142 LRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |++||+++++....+ .+|...|.+++|+|++++|++++.||.|++||+++++.+
T Consensus       197 i~i~d~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~  250 (340)
T 4aow_A          197 VKVWNLANCKLKTNH-IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL  250 (340)
T ss_dssp             EEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred             EEEEECCCCceeeEe-cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence            999999999888776 688999999999999999999999999999999988764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.93  E-value=1.7e-23  Score=154.21  Aligned_cols=185  Identities=13%  Similarity=0.077  Sum_probs=138.7

Q ss_pred             cceeEEEECCCCceEEEeeCCC---eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEM---NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~   76 (198)
                      +.|.+++|+|+|++|++++.++   .|++||+.+++.. .+.  .+...+.+++|+|+++.++.+++.++.  |++||+.
T Consensus       179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~--~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~  255 (415)
T 2hqs_A          179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA  255 (415)
T ss_dssp             SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred             CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee--cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence            4688999999999999998875   9999999887653 232  245678999999999999876666554  9999987


Q ss_pred             CCCC-ccccc-----------cCceEEEecC-CC--cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC--
Q psy8758          77 QLNS-PLNVH-----------KDMTSAAANE-DF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD--  139 (198)
Q Consensus        77 ~~~~-~~~~~-----------~~~~~~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--  139 (198)
                      +... .+..+           .+..++.++. ++  .|++||+.. ++ ...+..+...+.+++|+|+|++|++++.+  
T Consensus       256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g  333 (415)
T 2hqs_A          256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGG  333 (415)
T ss_dssp             TCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred             CCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCC
Confidence            5432 11111           1233554444 44  677788876 33 44555567788999999999999988764  


Q ss_pred             -CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC---eEEEEecCCCc
Q psy8758         140 -KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM---NLRVWKAHASE  194 (198)
Q Consensus       140 -~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~v~~w~~~~~~  194 (198)
                       ..|++||+.+++....  ..+ ..+.+++|+|+|++|++++.++   .|++||+..++
T Consensus       334 ~~~i~~~d~~~~~~~~l--~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~  389 (415)
T 2hqs_A          334 QQHIAKQDLATGGVQVL--SST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  389 (415)
T ss_dssp             CEEEEEEETTTCCEEEC--CCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             ceEEEEEECCCCCEEEe--cCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence             5899999999877443  334 3899999999999998887776   79999997554

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.93  E-value=1.4e-24  Score=160.78  Aligned_cols=160  Identities=16%  Similarity=0.173  Sum_probs=120.1

Q ss_pred             ceeEEEECCCCceEE----EeeCCCeEEEEEccCC--------ceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758           3 HVTHTVWSLDNKFVI----SASDEMNLRVWKAHAS--------EKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFN   69 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~----~~~~d~~i~i~~~~~~--------~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~   69 (198)
                      .|.+++|+|+|++|+    +++.|+.|++||+.++        +....+... .|...|.+++|+|+...++++++.|+.
T Consensus        94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~  173 (434)
T 2oit_A           94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS  173 (434)
T ss_dssp             CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred             cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence            599999999999999    7889999999998754        111122222 257789999999985444455678999


Q ss_pred             EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          70 LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        70 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      |++||+++.                              ........|...+.+++|+|+|++|++++.|+.|++||++ 
T Consensus       174 v~iwD~~~~------------------------------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-  222 (434)
T 2oit_A          174 IAVLQVTET------------------------------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-  222 (434)
T ss_dssp             EEEEEESSS------------------------------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred             EEEEEcCCC------------------------------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-
Confidence            988888753                              3334445678899999999999999999999999999998 


Q ss_pred             CceeeEEec------cCcccEEEEEEcCCCCEEEEe-cCCC------eEEEEecCCC
Q psy8758         150 GHSRDIYHT------KRMQHVTHTVWSLDNKFVISA-SDEM------NLRVWKAHAS  193 (198)
Q Consensus       150 ~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~-~~dg------~v~~w~~~~~  193 (198)
                      ++....+..      .|...+.+++|++++.++++. ..||      .+++|++...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          223 LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            444443311      233489999999998887543 3443      3899999765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.93  E-value=1.4e-24  Score=160.71  Aligned_cols=168  Identities=12%  Similarity=0.071  Sum_probs=126.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCc----------eee---eeeeeeecCceeeEEeCCCCCeEEE---EecC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE----------KLG---PIRKVVMSLRSNMVSWNPMEAFVFT---AANE   66 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----------~~~---~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~   66 (198)
                      .++.+++++++.++++++.++ +++|+.....          ...   ......+...|.+++|+|+++++++   +++.
T Consensus        38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~  116 (434)
T 2oit_A           38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY  116 (434)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred             CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence            478899999999999999887 8898764210          000   0111224567999999999999985   5678


Q ss_pred             CccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEE
Q psy8758          67 DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLY  145 (198)
Q Consensus        67 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~  145 (198)
                      |+.|++||+++......                   ........+..+.+|...|.+++|+|+ +.+|++++.|++|++|
T Consensus       117 d~~v~iwd~~~~~~~~~-------------------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw  177 (434)
T 2oit_A          117 GSIIAFFDVRTFSNEAK-------------------QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL  177 (434)
T ss_dssp             EEEEEEEEHHHHHCTTC-------------------SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred             CceEEEEEccccccCCc-------------------CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence            99999999864210000                   000000123455678999999999998 7899999999999999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      |++++...... .+|...|.+++|+|+|++|++++.||.|++||++
T Consensus       178 D~~~~~~~~~~-~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~  222 (434)
T 2oit_A          178 QVTETVKVCAT-LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT  222 (434)
T ss_dssp             EESSSEEEEEE-ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred             EcCCCcceeec-cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence            99998665443 4678899999999999999999999999999998

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.93  E-value=7.7e-24  Score=151.46  Aligned_cols=150  Identities=16%  Similarity=0.197  Sum_probs=122.6

Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc----------------ccccc---CceEEEecCCCcEEEEEc
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP----------------LNVHK---DMTSAAANEDFNLYSYDI  104 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~----------------~~~~~---~~~~~~~~~~~~i~~~d~  104 (198)
                      |...|.+++|+|++++++++ +.|+.|++||+......                +..++   +..+++++.|+.|++||+
T Consensus        10 H~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~   88 (351)
T 3f3f_A           10 HDDLVHDVVYDFYGRHVATC-SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE   88 (351)
T ss_dssp             CSSCEEEEEECSSSSEEEEE-ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred             cccceeEEEEcCCCCEEEEe-eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence            68889999999999988764 68999999999854311                11122   568999999999999999


Q ss_pred             cCCC--------cceeeecCCCcceEEEEEccC--CCEEEEeecCCcEEEEEcCCCcee---------------------
Q psy8758         105 RQLN--------SPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSR---------------------  153 (198)
Q Consensus       105 ~~~~--------~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~d~~v~v~d~~~~~~~---------------------  153 (198)
                      +...        +++..+..|...+.+++|+|+  +++|++++.|+.|++||+++++..                     
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (351)
T 3f3f_A           89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ  168 (351)
T ss_dssp             CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred             CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccc
Confidence            8732        446777889999999999999  999999999999999998765421                     


Q ss_pred             --------------------------------------eEEeccCcccEEEEEEcCCC----CEEEEecCCCeEEEEecC
Q psy8758         154 --------------------------------------DIYHTKRMQHVTHTVWSLDN----KFVISASDEMNLRVWKAH  191 (198)
Q Consensus       154 --------------------------------------~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~~w~~~  191 (198)
                                                            .....+|...|.+++|+|++    ++|++++.||.|++||++
T Consensus       169 ~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~  248 (351)
T 3f3f_A          169 SDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT  248 (351)
T ss_dssp             CCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred             ceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence                                                  11123578899999999998    899999999999999998


Q ss_pred             CCc
Q psy8758         192 ASE  194 (198)
Q Consensus       192 ~~~  194 (198)
                      ++.
T Consensus       249 ~~~  251 (351)
T 3f3f_A          249 EKL  251 (351)
T ss_dssp             ECC
T ss_pred             CCc
Confidence            754

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=1.2e-22  Score=142.40  Aligned_cols=191  Identities=14%  Similarity=0.069  Sum_probs=138.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCCCCCeEEEEec-CC--ccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN-ED--FNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~d--~~i~~~d~~~   77 (198)
                      +.|.+++|+|+|++|++++ ++.|++||+.+ ++....... .....+.+++|+|+++.+++++. .+  ..|+.++...
T Consensus        42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~  119 (297)
T 2ojh_A           42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG-FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG  119 (297)
T ss_dssp             SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred             cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence            4688999999999999886 78999999988 654333322 12356789999999999988652 22  4455555543


Q ss_pred             CCCc-c-----------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEE
Q psy8758          78 LNSP-L-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRL  144 (198)
Q Consensus        78 ~~~~-~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v  144 (198)
                      .... +           ......+++++..++.+.+|++.........+..+...+.+++|+|++++|+.++ .++.+++
T Consensus       120 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i  199 (297)
T 2ojh_A          120 GTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI  199 (297)
T ss_dssp             CCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred             CceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence            3211 1           1112234457788898999997543455566777888899999999999887766 5889999


Q ss_pred             EEcC-CCceeeEEeccCcccEEEEEEcCCCCEEEEecCC-----------CeEEEEecCCCcc
Q psy8758         145 YLAH-QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-----------MNLRVWKAHASEK  195 (198)
Q Consensus       145 ~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------g~v~~w~~~~~~~  195 (198)
                      |++. .+.....+ ..+...+..++|+|+|++|++++.+           +.|++||+++++.
T Consensus       200 ~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~  261 (297)
T 2ojh_A          200 WRVRVDGSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV  261 (297)
T ss_dssp             EEEETTSSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred             EEECCCCCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence            9986 34444433 5566789999999999998887655           5699999988764

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=9.6e-22  Score=141.40  Aligned_cols=190  Identities=8%  Similarity=0.012  Sum_probs=146.5

Q ss_pred             ceeEEEECCCCceEEEeeC-------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           3 HVTHTVWSLDNKFVISASD-------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      .+..++|+|+++++++++.       ++.|.+||..+++....+..   ...+..++|+|+++.++++...++.|.+||.
T Consensus        42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~  118 (353)
T 3vgz_A           42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVNSAVTAIDA  118 (353)
T ss_dssp             SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence            4678999999998888763       56899999988876555543   4457889999999988888777899999998


Q ss_pred             cCCCCc--ccc-------------------c-cCc-eEEEe-cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC
Q psy8758          76 RQLNSP--LNV-------------------H-KDM-TSAAA-NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR  131 (198)
Q Consensus        76 ~~~~~~--~~~-------------------~-~~~-~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~  131 (198)
                      .+....  +..                   . .+. ++++. ..++.|.+||+.+ .+....+..+...+..++|+|+++
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~s~dg~  197 (353)
T 3vgz_A          119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN-IKLKTAIQNTGKMSTGLALDSEGK  197 (353)
T ss_dssp             TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT-TEEEEEECCCCTTCCCCEEETTTT
T ss_pred             CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC-CceEEEecCCCCccceEEECCCCC
Confidence            754421  111                   1 112 33343 4578899999987 566666664556688999999999


Q ss_pred             EEEEeecCCcEEEEEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCccc
Q psy8758         132 EFVAGGYDKSLRLYLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKL  196 (198)
Q Consensus       132 ~l~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~~  196 (198)
                      ++++++.++.+.+||+.+++....+..   ++...+..++|+|++++++.++ .++.|.+||+.+++.+
T Consensus       198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  266 (353)
T 3vgz_A          198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL  266 (353)
T ss_dssp             EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred             EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence            999999999999999999988776643   2445688999999999776655 4599999999988764

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.90  E-value=8.8e-22  Score=140.59  Aligned_cols=183  Identities=12%  Similarity=0.050  Sum_probs=136.0

Q ss_pred             ceeEEEECCCCceEEEee------------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           3 HVTHTVWSLDNKFVISAS------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      .+.+++|+|+|++++++.            .++.|.+||+.+++....+..   ...+..++|+|+++.++++   ++.+
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~---~~~i  156 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQITMLAWARDGSKLYGL---GRDL  156 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSSCEEEE---SSSE
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC---CCCcceeEECCCCCEEEEe---CCeE
Confidence            467899999999888886            579999999988765444432   4557889999999988875   5789


Q ss_pred             EEEeccCCCCc--cccc-----------cCceEEEecCCC-----------------------cEEEEEccCCCcc-eee
Q psy8758          71 YSYDIRQLNSP--LNVH-----------KDMTSAAANEDF-----------------------NLYSYDIRQLNSP-LNV  113 (198)
Q Consensus        71 ~~~d~~~~~~~--~~~~-----------~~~~~~~~~~~~-----------------------~i~~~d~~~~~~~-~~~  113 (198)
                      .+||+.+....  +..+           ...+++++..++                       .|.+||+.+ ++. ...
T Consensus       157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~  235 (337)
T 1pby_B          157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-GEMAMRE  235 (337)
T ss_dssp             EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT-CCEEEEE
T ss_pred             EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC-CCceEee
Confidence            99998754321  1100           011222222222                       478999987 333 233


Q ss_pred             ecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         114 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       114 ~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +..+...+.+++|+|++++++++  ++.|.+||+.+++....+..+  ..+.+++|+|+|++|++++.++.|.+||+.++
T Consensus       236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~  311 (337)
T 1pby_B          236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL  311 (337)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred             cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC--CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence            34556678899999999999888  799999999999887766433  46789999999999888888999999999998


Q ss_pred             ccc
Q psy8758         194 EKL  196 (198)
Q Consensus       194 ~~~  196 (198)
                      +.+
T Consensus       312 ~~~  314 (337)
T 1pby_B          312 EKK  314 (337)
T ss_dssp             CEE
T ss_pred             cEE
Confidence            765

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.90  E-value=2.1e-21  Score=147.38  Aligned_cols=183  Identities=7%  Similarity=0.097  Sum_probs=137.5

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEc--cCCceeeeeeeeeecCceeeEEeCC----CCCeEEEEecCCccEEEEeccC
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKA--HASEKLGPIRKVVMSLRSNMVSWNP----MEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~--~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +..++|+|+|+++++++.|+.|++||+  .+++....+.   ....+..++|+|    ++++++++...+++|.+||..+
T Consensus       181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t  257 (543)
T 1nir_A          181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET  257 (543)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE---CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred             cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe---cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence            678999999999999999999999999  6766555444   355678999999    9999988765689999999875


Q ss_pred             CCCc--ccc----------c-------------cCceEEEecCCCcEEEEEccCCCccee--eecCCCcceEEEEEccCC
Q psy8758          78 LNSP--LNV----------H-------------KDMTSAAANEDFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        78 ~~~~--~~~----------~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~  130 (198)
                      .+..  +..          |             ....+++...+++|.+||..+. +.+.  .+ .+...+..++|+|+|
T Consensus       258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~-~~l~~~~i-~~~~~~~~~~~spdg  335 (543)
T 1nir_A          258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI-DNLTVTSI-GAAPFLHDGGWDSSH  335 (543)
T ss_dssp             CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS-SSCEEEEE-ECCSSCCCEEECTTS
T ss_pred             cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC-CcceeEEe-ccCcCccCceECCCC
Confidence            4321  110          1             2345677788999999999873 3333  33 345667889999999


Q ss_pred             CEEEEe-ecCCcEEEEEcCCCceeeEEecc---CcccEEEEEEcCC-CCEEEEec-CCCeEEEEecCC
Q psy8758         131 REFVAG-GYDKSLRLYLAHQGHSRDIYHTK---RMQHVTHTVWSLD-NKFVISAS-DEMNLRVWKAHA  192 (198)
Q Consensus       131 ~~l~~~-~~d~~v~v~d~~~~~~~~~~~~~---~~~~v~~~~~s~~-~~~l~~~~-~dg~v~~w~~~~  192 (198)
                      ++++++ ..+++|.+||+.++++...+..+   |.+....+ ++|+ +..++++. .|++|.+||+.+
T Consensus       336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~  402 (543)
T 1nir_A          336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP  402 (543)
T ss_dssp             CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence            977655 46899999999999988877432   54433333 4777 66677765 689999999988

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.90  E-value=3.4e-22  Score=156.77  Aligned_cols=189  Identities=13%  Similarity=0.143  Sum_probs=137.3

Q ss_pred             cceeEEEECCCCceEEEeeC-CC-----eEEEEEccCCceeeeeeeeeec----------------------CceeeEEe
Q psy8758           2 QHVTHTVWSLDNKFVISASD-EM-----NLRVWKAHASEKLGPIRKVVMS----------------------LRSNMVSW   53 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~-d~-----~i~i~~~~~~~~~~~~~~~~~~----------------------~~v~~~~~   53 (198)
                      +.+.+++|||||++|++++. |+     .|++||+.+++....+......                      ..+.+++|
T Consensus        37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  116 (741)
T 2ecf_A           37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW  116 (741)
T ss_dssp             CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred             CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence            35889999999999999988 88     8999999888754444322111                      23789999


Q ss_pred             CCCCCeEEEEecCCccEEEEeccCC---C-Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCC
Q psy8758          54 NPMEAFVFTAANEDFNLYSYDIRQL---N-SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT  118 (198)
Q Consensus        54 ~~~~~~~~~~~~~d~~i~~~d~~~~---~-~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~  118 (198)
                      +||++.+++++.  +.|++||+.+.   . ..+..+.           +..++.++ ++.|++||+.+ ++.......+.
T Consensus       117 SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~-g~~~~~~~~~~  192 (741)
T 2ecf_A          117 SPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS-GRQMQLTADGS  192 (741)
T ss_dssp             CTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT-TEEEECCCCCC
T ss_pred             CCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCC-CCEEEeccCCc
Confidence            999999988653  89999999865   2 2222221           12344444 46899999987 44443333332


Q ss_pred             cc----------------eEEEEEccCCCEEEEeecCC---------------------------------cEEEEEcCC
Q psy8758         119 SA----------------VTSVDYSPTGREFVAGGYDK---------------------------------SLRLYLAHQ  149 (198)
Q Consensus       119 ~~----------------i~~~~~sp~~~~l~~~~~d~---------------------------------~v~v~d~~~  149 (198)
                      ..                +..++|||||++|++++.|+                                 .|++||+.+
T Consensus       193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~  272 (741)
T 2ecf_A          193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE  272 (741)
T ss_dssp             SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred             cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence            22                47799999999999987765                                 789999988


Q ss_pred             -CceeeEEec-cCcccEEEEEEcCCCCEEEEecC-----CCeEEEEecCCCcc
Q psy8758         150 -GHSRDIYHT-KRMQHVTHTVWSLDNKFVISASD-----EMNLRVWKAHASEK  195 (198)
Q Consensus       150 -~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-----dg~v~~w~~~~~~~  195 (198)
                       ++....... .|...+..++| |||++|+.++.     +..|++||+.+++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~  324 (741)
T 2ecf_A          273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ  324 (741)
T ss_dssp             TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred             CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence             776544322 46778999999 99999886643     57899999998764

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=8.6e-21  Score=135.77  Aligned_cols=190  Identities=11%  Similarity=0.151  Sum_probs=130.4

Q ss_pred             ceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC-CCC
Q psy8758           3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ-LNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~   80 (198)
                      .+..++|+|+|+++++++. ++.|.+||+.++..............+.+++|+|+++.+++++..++.|.+||+.. ...
T Consensus        85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  164 (343)
T 1ri6_A           85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL  164 (343)
T ss_dssp             CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred             CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence            4678999999998877664 88999999964433333333334456889999999999988765789999999976 321


Q ss_pred             ------ccc-----------cc-cC-ceEEEecCCCcEEEEEccCC-Ccc--eeeec---CC---CcceEEEEEccCCCE
Q psy8758          81 ------PLN-----------VH-KD-MTSAAANEDFNLYSYDIRQL-NSP--LNVHK---DM---TSAVTSVDYSPTGRE  132 (198)
Q Consensus        81 ------~~~-----------~~-~~-~~~~~~~~~~~i~~~d~~~~-~~~--~~~~~---~~---~~~i~~~~~sp~~~~  132 (198)
                            ...           .+ .+ .+++++..++.+.+|++... +..  .....   ..   ...+..++|+|+|++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~  244 (343)
T 1ri6_A          165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH  244 (343)
T ss_dssp             EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred             eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence                  111           11 11 24556668899999999641 221  22222   11   235678999999997


Q ss_pred             EEE-eecCCcEEEEEcC--CCc--eeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecC--CCc
Q psy8758         133 FVA-GGYDKSLRLYLAH--QGH--SRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAH--ASE  194 (198)
Q Consensus       133 l~~-~~~d~~v~v~d~~--~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~--~~~  194 (198)
                      |++ ...++.|.+||+.  ++.  .+..+ ..+ ..+..++|+|+|++|++++ .++.|.+|+++  +++
T Consensus       245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~  312 (343)
T 1ri6_A          245 LYACDRTASLITVFSVSEDGSVLSKEGFQ-PTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL  312 (343)
T ss_dssp             EEEEETTTTEEEEEEECTTSCCEEEEEEE-ECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred             EEEEecCCCEEEEEEEcCCCCceEEeeee-cCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence            774 4578999999998  333  33333 222 3488999999999888776 68999999554  553

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.89  E-value=1.8e-20  Score=134.82  Aligned_cols=191  Identities=12%  Similarity=0.091  Sum_probs=129.9

Q ss_pred             ceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeec----------CceeeEEeCCCCCeEEEEecCCccEE
Q psy8758           3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMS----------LRSNMVSWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~d~~i~   71 (198)
                      .+..++|+|+|++|++++ .++.+.+|++........+......          ..+.+++|+|+++ ++++...++.|.
T Consensus        87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~  165 (347)
T 3hfq_A           87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY  165 (347)
T ss_dssp             CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred             CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence            467899999999888887 6799999999643333333332221          2367899999999 777767788999


Q ss_pred             EEeccC-CCCc---------------cccc-cC-ceEEEecCCCcEEEEEccCC-Cc--ceeeecCCC------cceEEE
Q psy8758          72 SYDIRQ-LNSP---------------LNVH-KD-MTSAAANEDFNLYSYDIRQL-NS--PLNVHKDMT------SAVTSV  124 (198)
Q Consensus        72 ~~d~~~-~~~~---------------~~~~-~~-~~~~~~~~~~~i~~~d~~~~-~~--~~~~~~~~~------~~i~~~  124 (198)
                      +|++.. ....               +... .+ .++++...++.+.+|++... ++  .+..+....      ..+..+
T Consensus       166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  245 (347)
T 3hfq_A          166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI  245 (347)
T ss_dssp             EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred             EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence            999872 2110               0111 12 24566678889999998741 22  122222222      348889


Q ss_pred             EEccCCCEEE-EeecCCcEEEEEcCCC---ceeeEEeccCcccEEEEEEcCCCCEEEEecC-CCeEEEE--ecCCCcc
Q psy8758         125 DYSPTGREFV-AGGYDKSLRLYLAHQG---HSRDIYHTKRMQHVTHTVWSLDNKFVISASD-EMNLRVW--KAHASEK  195 (198)
Q Consensus       125 ~~sp~~~~l~-~~~~d~~v~v~d~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~v~~w--~~~~~~~  195 (198)
                      +|+|||++|+ +...++.|.+|++...   +.+..+ ..+...+..++|+|||++|++++. ++.|.+|  |.++|+.
T Consensus       246 ~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l  322 (347)
T 3hfq_A          246 RLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL  322 (347)
T ss_dssp             EECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             EECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence            9999999774 5556899999999732   223333 334456889999999998887765 5899999  5556664

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.89  E-value=3.1e-20  Score=132.85  Aligned_cols=189  Identities=9%  Similarity=0.107  Sum_probs=130.4

Q ss_pred             cceeEEEECCCCceEEEeeCC-CeEEEEEcc--CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc--
Q psy8758           2 QHVTHTVWSLDNKFVISASDE-MNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR--   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d-~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--   76 (198)
                      +.+.+++|+|+|+++++++.+ +.|.+|++.  +++ ...+........+..++|+|+++.+++++..++.|.+||+.  
T Consensus        38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~  116 (343)
T 1ri6_A           38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG  116 (343)
T ss_dssp             SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred             CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence            357789999999988888876 999999997  444 23333333344788999999999998877678999999993  


Q ss_pred             -CCCC-----------ccccc-cC-ceEEEecCCCcEEEEEccCCCccee----eecC-CCcceEEEEEccCCCEEEEee
Q psy8758          77 -QLNS-----------PLNVH-KD-MTSAAANEDFNLYSYDIRQLNSPLN----VHKD-MTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        77 -~~~~-----------~~~~~-~~-~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~-~~~~i~~~~~sp~~~~l~~~~  137 (198)
                       ....           .+... .+ .++++...++.|.+||+...++...    .... ....+..++|+|+++++++++
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~  196 (343)
T 1ri6_A          117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN  196 (343)
T ss_dssp             EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred             ccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence             1110           01111 12 2344444899999999986333221    2222 334688999999999776554


Q ss_pred             -cCCcEEEEEcCC--Ccee--eEEe---ccC--cccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758         138 -YDKSLRLYLAHQ--GHSR--DIYH---TKR--MQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH  191 (198)
Q Consensus       138 -~d~~v~v~d~~~--~~~~--~~~~---~~~--~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~  191 (198)
                       .++.+.+|++..  ++..  ....   .++  ...+..++|+|+|++|+ +...++.|.+|++.
T Consensus       197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~  261 (343)
T 1ri6_A          197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS  261 (343)
T ss_dssp             TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence             789999999954  4332  2221   111  23577899999998776 45578999999998

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.89  E-value=7.3e-21  Score=144.41  Aligned_cols=191  Identities=8%  Similarity=0.004  Sum_probs=145.7

Q ss_pred             ceeEEEECC----CCceEEEee-CCCeEEEEEccCCceeeeeeeee--------e-cCceeeEEeCCCCCeEEEEecCCc
Q psy8758           3 HVTHTVWSL----DNKFVISAS-DEMNLRVWKAHASEKLGPIRKVV--------M-SLRSNMVSWNPMEAFVFTAANEDF   68 (198)
Q Consensus         3 ~v~~~~~s~----~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~--------~-~~~v~~~~~~~~~~~~~~~~~~d~   68 (198)
                      .+..++|+|    +|+++++++ .+++|.+||..+++.+..+....        | ...+..+.++|+++.++++...++
T Consensus       223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g  302 (543)
T 1nir_A          223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG  302 (543)
T ss_dssp             EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence            467899999    999999988 48999999999888777665422        1 236789999999998888888899


Q ss_pred             cEEEEeccCCCCcc---------------ccccCceEEEecCCCcEEEEEccCCCcceeeecC----CCcceEEEEEccC
Q psy8758          69 NLYSYDIRQLNSPL---------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD----MTSAVTSVDYSPT  129 (198)
Q Consensus        69 ~i~~~d~~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~sp~  129 (198)
                      .|.+||........               ......+++++..+++|.+||+.+ ++.+..+..    |......+ ++|+
T Consensus       303 ~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~-~~p~  380 (543)
T 1nir_A          303 KVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF-VHPK  380 (543)
T ss_dssp             EEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE-EETT
T ss_pred             eEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc-CCCC
Confidence            99999987643211               111123456667789999999998 677776653    44333333 4777


Q ss_pred             -CCEEEEee-cCCcEEEEEcCC-------CceeeEEeccCcccEEEEEEcCCCCEEEEec-------CCCeEEEEecCCC
Q psy8758         130 -GREFVAGG-YDKSLRLYLAHQ-------GHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-------DEMNLRVWKAHAS  193 (198)
Q Consensus       130 -~~~l~~~~-~d~~v~v~d~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~v~~w~~~~~  193 (198)
                       ++.++++. .|++|.+||+.+       .+.+..+ ..|...+..++++|+|++|++++       .+++|.+||++++
T Consensus       381 ~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l-~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~  459 (543)
T 1nir_A          381 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL  459 (543)
T ss_dssp             TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred             CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence             66677765 589999999998       7777777 56767888999999999999886       2679999999988


Q ss_pred             ccc
Q psy8758         194 EKL  196 (198)
Q Consensus       194 ~~~  196 (198)
                      +.+
T Consensus       460 ~~~  462 (543)
T 1nir_A          460 DAK  462 (543)
T ss_dssp             TSC
T ss_pred             CCC
Confidence            764

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.89  E-value=3.1e-21  Score=147.67  Aligned_cols=183  Identities=8%  Similarity=-0.052  Sum_probs=129.0

Q ss_pred             ceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC---CccEEEE--ec-
Q psy8758           3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE---DFNLYSY--DI-   75 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---d~~i~~~--d~-   75 (198)
                      +|++++|+|||++||.++. ||+++||++.+++ ...+..+ +...+..+.|+|+ +.++++ +.   +....+|  +. 
T Consensus        23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~-~~~~~~~~~~spd-~~l~~~-~~~~g~~~~~l~~~~~~   98 (582)
T 3o4h_A           23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNRE-PINSVLDPHYGVG-RVILVR-DVSKGAEQHALFKVNTS   98 (582)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSS-CCSEECEECTTCS-EEEEEE-ECSTTSCCEEEEEEETT
T ss_pred             chheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecc-cccccccccCCCC-eEEEEe-ccCCCCcceEEEEEecc
Confidence            6899999999999999886 9999999996554 3333322 2246889999999 555544 33   3444554  44 


Q ss_pred             -cCCCCcc-----------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC----
Q psy8758          76 -RQLNSPL-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD----  139 (198)
Q Consensus        76 -~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d----  139 (198)
                       ......+           ....+.++++...++.+.+||+.+ ++... +..+..  .+++|||||++|++++.+    
T Consensus        99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~  174 (582)
T 3o4h_A           99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDG-GGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGR  174 (582)
T ss_dssp             STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEET-TEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred             CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccC-CcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence             2221111           112223344444455556999987 44333 333333  789999999999988776    


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC--eEEEEecCCCcc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--NLRVWKAHASEK  195 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~v~~w~~~~~~~  195 (198)
                      ..|++||+.+++....  ..|...+..++|||||++|+++..++  .|++||+++++.
T Consensus       175 ~~i~~~d~~~g~~~~l--~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~  230 (582)
T 3o4h_A          175 VSLFTSNLSSGGLRVF--DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV  230 (582)
T ss_dssp             EEEEEEETTTCCCEEE--CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred             eEEEEEcCCCCCceEe--ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence            7899999998887643  56778899999999999999888888  899999998764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.89  E-value=1.9e-20  Score=138.04  Aligned_cols=175  Identities=13%  Similarity=0.074  Sum_probs=127.9

Q ss_pred             CceEEEeeCC------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---ccEEEEeccCCCCc-c
Q psy8758          13 NKFVISASDE------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---FNLYSYDIRQLNSP-L   82 (198)
Q Consensus        13 ~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~~~d~~~~~~~-~   82 (198)
                      +..++.++.+      +.|++||+..+ ....+..  +...+.+++|+|+++.+++++ .+   ..|++||+.+.... +
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~--~~~~v~~~~~Spdg~~la~~s-~~~~~~~i~~~d~~tg~~~~l  218 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHR--SPQPLMSPAWSPDGSKLAYVT-FESGRSALVIQTLANGAVRQV  218 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEE--ESSCEEEEEECTTSSEEEEEE-CTTSSCEEEEEETTTCCEEEE
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeC--CCCcceeeEEcCCCCEEEEEE-ecCCCcEEEEEECCCCcEEEe
Confidence            5566666544      79999999743 3444443  467899999999999998865 44   48999999765421 1


Q ss_pred             ccc-----------cCc-eEEEecCCC--cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CC--cEEEE
Q psy8758          83 NVH-----------KDM-TSAAANEDF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DK--SLRLY  145 (198)
Q Consensus        83 ~~~-----------~~~-~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~--~v~v~  145 (198)
                      ..+           .+. ++++++.++  .|++||+.+ ++ ...+..|...+.+++|+|||++|++++. ++  .|++|
T Consensus       219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~  296 (415)
T 2hqs_A          219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV  296 (415)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-CC-EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence            111           122 343666555  499999986 33 4667778888999999999999988876 44  67788


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCCcc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHASEK  195 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~~~  195 (198)
                      |+.+++....  ..+...+..++|+|+|++|++++.+   ..|++||+.+++.
T Consensus       297 d~~~~~~~~l--~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~  347 (415)
T 2hqs_A          297 NINGGAPQRI--TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV  347 (415)
T ss_dssp             ETTSSCCEEC--CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred             ECCCCCEEEE--ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence            9888765432  3455788999999999999887654   5899999998764

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.88  E-value=3.4e-20  Score=132.35  Aligned_cols=184  Identities=8%  Similarity=0.050  Sum_probs=131.3

Q ss_pred             EEEECCCCceEEEeeCCC---eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc-EEEEeccCCCCc
Q psy8758           6 HTVWSLDNKFVISASDEM---NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN-LYSYDIRQLNSP   81 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-i~~~d~~~~~~~   81 (198)
                      +++|+|+|++++++..++   .|.+||+.+++....+.   .......++|+|+++++++++..++. +.+|++......
T Consensus        88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~  164 (331)
T 3u4y_A           88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP---IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL  164 (331)
T ss_dssp             CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE---CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred             ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE---CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence            499999999998655553   89999998887655443   34556899999999988887767788 999997642211


Q ss_pred             ----------------cccc-cC-ceEEEecCCCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCCCEEEEee-cC
Q psy8758          82 ----------------LNVH-KD-MTSAAANEDFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTGREFVAGG-YD  139 (198)
Q Consensus        82 ----------------~~~~-~~-~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d  139 (198)
                                      +... .+ .+++++..++.|.+||+.+ ++.   +..+.. ...+..++|+|+|+++++++ .+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~  242 (331)
T 3u4y_A          165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTEST  242 (331)
T ss_dssp             EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSE
T ss_pred             eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCC
Confidence                            0111 12 3566677889999999987 555   555553 35678899999999776554 57


Q ss_pred             CcEEEEEcCCCce--eeEEecc---Cc---ccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCc
Q psy8758         140 KSLRLYLAHQGHS--RDIYHTK---RM---QHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASE  194 (198)
Q Consensus       140 ~~v~v~d~~~~~~--~~~~~~~---~~---~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~  194 (198)
                      +.|.+||+.+++.  +..+...   +.   .....++|+|||++|+++ ..++.|.+||+.+..
T Consensus       243 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          243 VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred             CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence            8899999999877  3222111   11   123568999999987654 556799999998654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.88  E-value=2e-21  Score=151.98  Aligned_cols=188  Identities=15%  Similarity=0.149  Sum_probs=134.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecC--------CccEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANE--------DFNLY   71 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~--------d~~i~   71 (198)
                      .+.+++|+|||+++++ +.||.|++||+.+++....+..  +..   .+.+++|+||+++++++...        ++.++
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~--~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~   94 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEG--KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV   94 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECT--TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecc--ccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence            3678899999998776 6899999999998876544432  222   48899999999999886532        37899


Q ss_pred             EEeccCCCC-ccc-------------cc-cCceEEEecCCCcEEEEEccCCCcceeeecCCCcc----------------
Q psy8758          72 SYDIRQLNS-PLN-------------VH-KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA----------------  120 (198)
Q Consensus        72 ~~d~~~~~~-~~~-------------~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~----------------  120 (198)
                      +||+.+... .+.             .. .+..++.++. +.|++||+.+ ++.......+...                
T Consensus        95 ~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~-g~~~~~~~~~~~~~~~~g~~~~v~~ee~~  172 (723)
T 1xfd_A           95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG-KQAIRVVSTGKEGVIYNGLSDWLYEEEIL  172 (723)
T ss_dssp             EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-SCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred             EEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-CceEEEecCCCCCceECcccceeEEEEec
Confidence            999876542 111             11 2234555554 7899999987 4555444433332                


Q ss_pred             --eEEEEEccCCCEEEEeecCC----------------------------------cEEEEEcCCCceeeEEecc-----
Q psy8758         121 --VTSVDYSPTGREFVAGGYDK----------------------------------SLRLYLAHQGHSRDIYHTK-----  159 (198)
Q Consensus       121 --i~~~~~sp~~~~l~~~~~d~----------------------------------~v~v~d~~~~~~~~~~~~~-----  159 (198)
                        +.+++|||||+.|++++.|+                                  .|++||+.+++....+...     
T Consensus       173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~  252 (723)
T 1xfd_A          173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM  252 (723)
T ss_dssp             SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred             cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence              37899999999999887543                                  7999999988754443221     


Q ss_pred             CcccEEEEEEcCCCCEEEEec----CCCeEEEEecCCCcc
Q psy8758         160 RMQHVTHTVWSLDNKFVISAS----DEMNLRVWKAHASEK  195 (198)
Q Consensus       160 ~~~~v~~~~~s~~~~~l~~~~----~dg~v~~w~~~~~~~  195 (198)
                      +...+..++|||||++|++.+    .+..|++||+.+++.
T Consensus       253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~  292 (723)
T 1xfd_A          253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC  292 (723)
T ss_dssp             SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred             ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence            256789999999999887654    236799999998874

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.88  E-value=5.9e-20  Score=132.03  Aligned_cols=190  Identities=8%  Similarity=0.022  Sum_probs=140.1

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeec-------CceeeEEeCCCCCeEEEEe-cCCccEEEE
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMS-------LRSNMVSWNPMEAFVFTAA-NEDFNLYSY   73 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~-~~d~~i~~~   73 (198)
                      .+..++|+|+|++++++ ..++.|.+||..+++....+......       ..+..++|+|+++.+++++ ..++.|.+|
T Consensus        90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~  169 (353)
T 3vgz_A           90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV  169 (353)
T ss_dssp             CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred             CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence            35788999999966554 55799999999988765555432111       1257899999999888876 357889999


Q ss_pred             eccCCCCcc--c----------c-ccCceEEEecCCCcEEEEEccCCCcceeeecC----CCcceEEEEEccCCCEEEEe
Q psy8758          74 DIRQLNSPL--N----------V-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD----MTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        74 d~~~~~~~~--~----------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~  136 (198)
                      |..+.....  .          . ..+..++++..++.+.+||+.+ .+....+..    +...+..++|+|++++++++
T Consensus       170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~  248 (353)
T 3vgz_A          170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFIT  248 (353)
T ss_dssp             ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred             cCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence            987543211  1          1 1234577777899999999987 566655543    45567889999999977766


Q ss_pred             ec-CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEE-ecCCCeEEEEecCCCccc
Q psy8758         137 GY-DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVIS-ASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       137 ~~-d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~v~~w~~~~~~~~  196 (198)
                      +. ++.|.+||..+++....+..+.   ...++|+|+|++++. ...++.|.+||+.+++.+
T Consensus       249 ~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~  307 (353)
T 3vgz_A          249 DSKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV  307 (353)
T ss_dssp             ESSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             eCCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence            55 5899999999998877764432   256899999996554 457899999999988765

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.88  E-value=5.3e-20  Score=131.37  Aligned_cols=187  Identities=13%  Similarity=0.074  Sum_probs=131.7

Q ss_pred             ceeEEEECCCCceEEEeeC-CCeEEEEEccCCce-eeeeeeeeecCceeeEEeCCCCCeEEEEecCC-c--cEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEK-LGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-F--NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~--~i~~~d~~~   77 (198)
                      .+ .++|+|+|+++++++. ++.|.+||+.+++. ...+..  +..+..+++|+|+++++++ +..+ +  .|.+||+.+
T Consensus        42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~-~~~~~~~~~i~v~d~~~  117 (331)
T 3u4y_A           42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE--GQSSMADVDITPDDQFAVT-VTGLNHPFNMQSYSFLK  117 (331)
T ss_dssp             EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE--CSSCCCCEEECTTSSEEEE-CCCSSSSCEEEEEETTT
T ss_pred             cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc--CCCCccceEECCCCCEEEE-ecCCCCcccEEEEECCC
Confidence            45 8999999997776665 88999999988875 333322  2333333999999999984 4444 3  899999875


Q ss_pred             CCCc--c-----------ccccCceEEEecCCCc-EEEEEccCCCcce---eeecCCCcceEEEEEccCCCEEEE-eecC
Q psy8758          78 LNSP--L-----------NVHKDMTSAAANEDFN-LYSYDIRQLNSPL---NVHKDMTSAVTSVDYSPTGREFVA-GGYD  139 (198)
Q Consensus        78 ~~~~--~-----------~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~-~~~d  139 (198)
                      ....  +           ......++++...++. +.+|++...+...   .........+..++|+|+|+++++ +..+
T Consensus       118 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~  197 (331)
T 3u4y_A          118 NKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG  197 (331)
T ss_dssp             TEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred             CCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC
Confidence            4321  1           1111235666667688 9999987533221   111233455789999999996655 4568


Q ss_pred             CcEEEEEcCCCce---eeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCcc
Q psy8758         140 KSLRLYLAHQGHS---RDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEK  195 (198)
Q Consensus       140 ~~v~v~d~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~  195 (198)
                      +.|++||+.+++.   +..+.  ....+..++|+|||++++.+ ..++.|.+||+.+++.
T Consensus       198 ~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~  255 (331)
T 3u4y_A          198 NSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL  255 (331)
T ss_dssp             TEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred             CeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence            9999999999887   55553  23677889999999976654 4578899999998876

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.87  E-value=9.2e-20  Score=130.76  Aligned_cols=187  Identities=10%  Similarity=0.002  Sum_probs=132.3

Q ss_pred             ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeee----cCceeeEEeCCCCCeEEEEecC-----------
Q psy8758           3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVM----SLRSNMVSWNPMEAFVFTAANE-----------   66 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~-----------   66 (198)
                      .+..++|+|+|++++ +...++.|.+||+.+++....+.....    ...+..++|+|++++++++...           
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~  123 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK  123 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence            467899999998665 445689999999988875544432110    2236789999999999887533           


Q ss_pred             CccEEEEeccCCC---C--ccc---------cccCceEEEecCCCcEEEEEccCCCcceeeecCCC--------------
Q psy8758          67 DFNLYSYDIRQLN---S--PLN---------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT--------------  118 (198)
Q Consensus        67 d~~i~~~d~~~~~---~--~~~---------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------  118 (198)
                      ++.|.+||+.+..   .  ...         ..++..+++++  +.|.+||+.+ ++....+..+.              
T Consensus       124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  200 (349)
T 1jmx_B          124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYF  200 (349)
T ss_dssp             CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES--SSEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCC
T ss_pred             CCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEcc--CcEEEEeCCC-CceeccccccccCCccccCccceee
Confidence            4899999987521   1  011         11111133333  3489999876 44444433221              


Q ss_pred             ------------------------------------------------------cceEEEEEcc-CCCEEEEeecCCcEE
Q psy8758         119 ------------------------------------------------------SAVTSVDYSP-TGREFVAGGYDKSLR  143 (198)
Q Consensus       119 ------------------------------------------------------~~i~~~~~sp-~~~~l~~~~~d~~v~  143 (198)
                                                                            ..+..++|+| ++++++++  ++.|.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~  278 (349)
T 1jmx_B          201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLA  278 (349)
T ss_dssp             CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEE
T ss_pred             ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEE
Confidence                                                                  1345678889 99998888  88999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+.+++....+..+  ..+.+++|+|+|++|++++.++.|++||+++++.+
T Consensus       279 ~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~  329 (349)
T 1jmx_B          279 KYDLKQRKLIKAANLD--HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV  329 (349)
T ss_dssp             EEETTTTEEEEEEECS--SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred             EEECccCeEEEEEcCC--CCccceEECCCCCEEEEecCCCeEEEEecccccee
Confidence            9999999887776433  45778999999998888888899999999998865

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.86  E-value=1.9e-20  Score=131.08  Aligned_cols=178  Identities=13%  Similarity=0.061  Sum_probs=127.1

Q ss_pred             cceeEEEECCCCceEEEee--CCCeEEEEEc--cCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISAS--DEMNLRVWKA--HASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ..+.+++|+|+|+++++++  .++...||.+  .+++ ...+.   ....+..++|+|+++.++.++..++.+.+|++..
T Consensus        85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~  160 (297)
T 2ojh_A           85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT---KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI  160 (297)
T ss_dssp             CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC---SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred             ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee---cCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence            3578899999999999988  3345555555  4433 22222   2345788999999999987777889888888642


Q ss_pred             C--C-Cccc----------cc-cCc-eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC---
Q psy8758          78 L--N-SPLN----------VH-KDM-TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---  139 (198)
Q Consensus        78 ~--~-~~~~----------~~-~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---  139 (198)
                      .  . ..+.          .. .+. +++++..++.+.+|++.........+..+...+..++|+|+|++|++++.+   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  240 (297)
T 2ojh_A          161 DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV  240 (297)
T ss_dssp             TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred             CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence            2  1 1111          11 122 344455688999999874356677777788889999999999999888765   


Q ss_pred             --------CcEEEEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         140 --------KSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       140 --------~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                              +.|++||+.+++..... ..+|...+..++|+|++++|++++.+.
T Consensus       241 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          241 FDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             CSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence                    56999999988764443 236677899999999999988776543

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.86  E-value=1.8e-18  Score=125.05  Aligned_cols=187  Identities=13%  Similarity=0.098  Sum_probs=129.1

Q ss_pred             ceeEEEECCCCceEEEeeCC----CeEEEEEccCC-ceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDE----MNLRVWKAHAS-EKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .+..++|+|+|++|++++.+    +.+.+|++... .....+.... +......+++  +++.++++...++.+.+|++.
T Consensus        51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~  128 (361)
T 3scy_A           51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIG  128 (361)
T ss_dssp             CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBC
T ss_pred             CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeC
Confidence            45678999999999998875    79999998753 2333343332 3445667777  788888877678999999986


Q ss_pred             CCCCc--------------------------cccc-cC-ceEEEecCCCcEEEEEccCCCc----c-e-------eeecC
Q psy8758          77 QLNSP--------------------------LNVH-KD-MTSAAANEDFNLYSYDIRQLNS----P-L-------NVHKD  116 (198)
Q Consensus        77 ~~~~~--------------------------~~~~-~~-~~~~~~~~~~~i~~~d~~~~~~----~-~-------~~~~~  116 (198)
                      .....                          +... .+ .++++...++.+.+|++.....    . +       .....
T Consensus       129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~  208 (361)
T 3scy_A          129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA  208 (361)
T ss_dssp             TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC
T ss_pred             CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC
Confidence            42211                          1111 12 2455666788999999875332    1 1       11223


Q ss_pred             CCcceEEEEEccCCCEEEEee-cCCcEEEEEcCCCceeeE--Ee--ccCcccEEEEEEcCCCCEEEEecC--CCeEEEEe
Q psy8758         117 MTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRDI--YH--TKRMQHVTHTVWSLDNKFVISASD--EMNLRVWK  189 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~~~~~--~~--~~~~~~v~~~~~s~~~~~l~~~~~--dg~v~~w~  189 (198)
                      ....+..++|+|+|+++++++ .++.|.+|++.+++....  ..  ..+......++|+|||++|+++..  ++.|.+|+
T Consensus       209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~  288 (361)
T 3scy_A          209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK  288 (361)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred             CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence            445678999999999887776 689999999997755322  21  223345789999999998876654  58999999


Q ss_pred             cC
Q psy8758         190 AH  191 (198)
Q Consensus       190 ~~  191 (198)
                      ++
T Consensus       289 ~~  290 (361)
T 3scy_A          289 VD  290 (361)
T ss_dssp             EC
T ss_pred             Ec
Confidence            95

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.86  E-value=7.5e-19  Score=126.34  Aligned_cols=187  Identities=14%  Similarity=0.138  Sum_probs=127.7

Q ss_pred             ceeEEEECCCCceEEEeeC---CCeEEEEEccCCceeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           3 HVTHTVWSLDNKFVISASD---EMNLRVWKAHASEKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      .+..++|+|+|+ +++++.   ++.|++|++.+++. ..+.. ..+...+..++|+|+++.+++++..++.+.+|++...
T Consensus        41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~  118 (347)
T 3hfq_A           41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD  118 (347)
T ss_dssp             CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred             CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence            456799999999 555544   68999999976653 23332 2245678899999999999887667899999998521


Q ss_pred             CC-----c-------------------ccc-ccCceEEEecCCCcEEEEEccCCCccee--eecC-CCcceEEEEEccCC
Q psy8758          79 NS-----P-------------------LNV-HKDMTSAAANEDFNLYSYDIRQLNSPLN--VHKD-MTSAVTSVDYSPTG  130 (198)
Q Consensus        79 ~~-----~-------------------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~-~~~~i~~~~~sp~~  130 (198)
                      ..     .                   +.. ..+.++++...++.|.+|++...+....  .+.. ....+..++|+|||
T Consensus       119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg  198 (347)
T 3hfq_A          119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG  198 (347)
T ss_dssp             SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred             CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC
Confidence            10     0                   111 1223566677788999999984233221  1222 23357889999999


Q ss_pred             CEEEE-eecCCcEEEEEcCC--Cceee--EEeccC-----cccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758         131 REFVA-GGYDKSLRLYLAHQ--GHSRD--IYHTKR-----MQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH  191 (198)
Q Consensus       131 ~~l~~-~~~d~~v~v~d~~~--~~~~~--~~~~~~-----~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~  191 (198)
                      +++++ ...++.+.+|++..  ++...  ......     ...+..++|+|||++|+ +...++.|.+|++.
T Consensus       199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~  270 (347)
T 3hfq_A          199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT  270 (347)
T ss_dssp             SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred             CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence            96665 55688999999884  44322  221111     14588999999999774 55668999999986

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.86  E-value=4.1e-20  Score=149.88  Aligned_cols=185  Identities=9%  Similarity=0.065  Sum_probs=140.1

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee---------eecCceeeEEeC-CCCCeEEEEecCCccEEEE
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV---------VMSLRSNMVSWN-PMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~---------~~~~~v~~~~~~-~~~~~~~~~~~~d~~i~~~   73 (198)
                      +...+|+|+|++++.+ .++.|.+|++...+ +..+...         .+...+..++|+ |+++.++++.  ++.+++|
T Consensus       247 ~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~  322 (1045)
T 1k32_A          247 YYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQ  322 (1045)
T ss_dssp             SCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEE
T ss_pred             cceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEE
Confidence            4577999999999887 48899999984333 2222221         123468899999 9999988764  7899999


Q ss_pred             eccCCCC-ccccc-----------cCceEEEecCCCcEE-EEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          74 DIRQLNS-PLNVH-----------KDMTSAAANEDFNLY-SYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        74 d~~~~~~-~~~~~-----------~~~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                      +...... .+..+           .+..++.++.+..++ +||+.. +. ...+..+...+..++|+|||++|++++.++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~  400 (1045)
T 1k32_A          323 DVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKFAVVANDRF  400 (1045)
T ss_dssp             CTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSEEEEEETTS
T ss_pred             cCCCCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCCEEEEECCCC
Confidence            9865431 11112           223456666677888 889876 33 344447778899999999999999999999


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC----------eEEEEecCCCcc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM----------NLRVWKAHASEK  195 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------~v~~w~~~~~~~  195 (198)
                      .|++||+.+++..... .+|...+.+++|||||++|++++.++          .|++||+.+++.
T Consensus       401 ~v~~~d~~tg~~~~~~-~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~  464 (1045)
T 1k32_A          401 EIMTVDLETGKPTVIE-RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI  464 (1045)
T ss_dssp             EEEEEETTTCCEEEEE-ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred             eEEEEECCCCceEEec-cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence            9999999999877665 46778899999999999998876544          899999988763

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=2.6e-19  Score=139.83  Aligned_cols=187  Identities=13%  Similarity=0.122  Sum_probs=134.7

Q ss_pred             eeEEEECCCCceEEEee---------------------------------CCCeEEEEEccCCceeeeeeeeeecCceee
Q psy8758           4 VTHTVWSLDNKFVISAS---------------------------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNM   50 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~---------------------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~   50 (198)
                      +.+++|||||++|++++                                 .+..|++||+.+++.........+...+..
T Consensus       183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~  262 (706)
T 2z3z_A          183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN  262 (706)
T ss_dssp             CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred             CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence            58999999999999887                                 446799999987764332222124456889


Q ss_pred             EEeCCCCCeEEEEecCC-----ccEEEEeccCC-CC----------------ccccc---cCceEEEecCCCcEEEEEcc
Q psy8758          51 VSWNPMEAFVFTAANED-----FNLYSYDIRQL-NS----------------PLNVH---KDMTSAAANEDFNLYSYDIR  105 (198)
Q Consensus        51 ~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~-~~----------------~~~~~---~~~~~~~~~~~~~i~~~d~~  105 (198)
                      ++|+|+++.++++. .+     ..|++||+.+. ..                .+...   .+.+++++..++.+++|++.
T Consensus       263 ~~~spdg~~l~~~~-~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~  341 (706)
T 2z3z_A          263 LSWSPDENILYVAE-VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD  341 (706)
T ss_dssp             EEECTTSSEEEEEE-ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred             EEEECCCCEEEEEE-eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence            99999999888754 33     38999998765 10                01112   34567778888888999887


Q ss_pred             CCCcceeeecCCCcceEE-EEEccCCCEEEEeec-CC----cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         106 QLNSPLNVHKDMTSAVTS-VDYSPTGREFVAGGY-DK----SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       106 ~~~~~~~~~~~~~~~i~~-~~~sp~~~~l~~~~~-d~----~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      ..+..+..+..+...+.. ++|+|+++.|+.++. ++    .|..||+.+++... +  .+...+.+++|+|||++++..
T Consensus       342 ~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-l--~~~~~~~~~~~spdg~~l~~~  418 (706)
T 2z3z_A          342 TTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD-L--TPESGMHRTQLSPDGSAIIDI  418 (706)
T ss_dssp             TTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE-S--CCSSSEEEEEECTTSSEEEEE
T ss_pred             CCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee-c--cCCCceEEEEECCCCCEEEEE
Confidence            435667777777777876 799999998766554 44    66777777765322 2  355678999999999988765


Q ss_pred             cCC----CeEEEEecCCCc
Q psy8758         180 SDE----MNLRVWKAHASE  194 (198)
Q Consensus       180 ~~d----g~v~~w~~~~~~  194 (198)
                      +.+    +.+++||+.+++
T Consensus       419 ~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          419 FQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             EECSSCSCEEEEEESSSCE
T ss_pred             ecCCCCCcEEEEEECCCCe
Confidence            433    569999998875

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.85  E-value=1e-19  Score=142.37  Aligned_cols=188  Identities=12%  Similarity=0.031  Sum_probs=129.7

Q ss_pred             ceeEEEECCCCceEEEeeCC---------CeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDE---------MNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      .|.+++|||||++|++++.+         +.+.+||+.+++. ..+.... +...+..++|+|||+.++++.  ++.|++
T Consensus        62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~--~~~i~~  138 (723)
T 1xfd_A           62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIF--ENNIYY  138 (723)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEE--TTEEEE
T ss_pred             ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEE--CCeEEE
Confidence            38899999999999998764         7888999988764 3333221 333478899999999998864  379999


Q ss_pred             EeccCCCCcc--c----------------------------c-ccCceEEEecCC-------------------------
Q psy8758          73 YDIRQLNSPL--N----------------------------V-HKDMTSAAANED-------------------------   96 (198)
Q Consensus        73 ~d~~~~~~~~--~----------------------------~-~~~~~~~~~~~~-------------------------   96 (198)
                      ||+.+.....  .                            . ..+..++.++.+                         
T Consensus       139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (723)
T 1xfd_A          139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY  218 (723)
T ss_dssp             ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred             EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence            9987543210  0                            1 112334444432                         


Q ss_pred             ---------CcEEEEEccCCCcceeeecCC------CcceEEEEEccCCCEEEEeec----CCcEEEEEcCCCceeeEEe
Q psy8758          97 ---------FNLYSYDIRQLNSPLNVHKDM------TSAVTSVDYSPTGREFVAGGY----DKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        97 ---------~~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~----d~~v~v~d~~~~~~~~~~~  157 (198)
                               ..|++||+.+ ++....+..+      ...+..++|||||+++++...    +..|++||+.+++......
T Consensus       219 ~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~  297 (723)
T 1xfd_A          219 PKAGSENPSISLHVIGLNG-PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE  297 (723)
T ss_dssp             CBTTSCCCEEEEEEEESSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred             CCCCCCCCeeEEEEEECCC-CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE
Confidence                     2789999987 4444455443      567899999999998876643    3579999999998776653


Q ss_pred             ccCcccEE----EEEEcCCCCEEEE--ecCCC------eEEEEe-cCCCc
Q psy8758         158 TKRMQHVT----HTVWSLDNKFVIS--ASDEM------NLRVWK-AHASE  194 (198)
Q Consensus       158 ~~~~~~v~----~~~~s~~~~~l~~--~~~dg------~v~~w~-~~~~~  194 (198)
                      ..+...+.    .++|+|||+.|+.  +..++      .|++|| ..+++
T Consensus       298 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~  347 (723)
T 1xfd_A          298 DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS  347 (723)
T ss_dssp             EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred             eccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence            33434443    7899999997764  44666      577777 34443

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.84  E-value=8.8e-18  Score=121.43  Aligned_cols=189  Identities=10%  Similarity=0.125  Sum_probs=123.7

Q ss_pred             eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeee-ee-----------cCceeeEEeCCCCCeEEEEecCCccE
Q psy8758           4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKV-VM-----------SLRSNMVSWNPMEAFVFTAANEDFNL   70 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~-~~-----------~~~v~~~~~~~~~~~~~~~~~~d~~i   70 (198)
                      ...+++  +++++++++ .++.+.+|++.....+..+... .+           ...+.+++|+|+++++++++..++.+
T Consensus       102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v  179 (361)
T 3scy_A          102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI  179 (361)
T ss_dssp             EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred             cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence            345566  788777766 5789999999754433222111 11           12246799999999988877678999


Q ss_pred             EEEeccCCCC----c-c--------------------ccc-cCc-eEEEecCCCcEEEEEccCCCcc--eeee---cCCC
Q psy8758          71 YSYDIRQLNS----P-L--------------------NVH-KDM-TSAAANEDFNLYSYDIRQLNSP--LNVH---KDMT  118 (198)
Q Consensus        71 ~~~d~~~~~~----~-~--------------------~~~-~~~-~~~~~~~~~~i~~~d~~~~~~~--~~~~---~~~~  118 (198)
                      .+|++.....    . +                    ..+ .+. ++++...++.|.+|++.+ +..  +..+   ..+.
T Consensus       180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~  258 (361)
T 3scy_A          180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNA  258 (361)
T ss_dssp             EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCC
T ss_pred             EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCC
Confidence            9998864331    0 0                    011 122 344455789999999985 332  2222   2233


Q ss_pred             cceEEEEEccCCCEEEEeec--CCcEEEEEcC--CCceeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEec--C
Q psy8758         119 SAVTSVDYSPTGREFVAGGY--DKSLRLYLAH--QGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKA--H  191 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~--~  191 (198)
                      .....++|+|||++|+++..  ++.|.+|++.  +++............+..++|+|||++|++++ .++.|.+|++  .
T Consensus       259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~  338 (361)
T 3scy_A          259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA  338 (361)
T ss_dssp             CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred             CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence            45689999999998877665  4899999996  44432222111145788999999999888776 6789999654  4


Q ss_pred             CCcc
Q psy8758         192 ASEK  195 (198)
Q Consensus       192 ~~~~  195 (198)
                      +++.
T Consensus       339 ~g~~  342 (361)
T 3scy_A          339 TGLL  342 (361)
T ss_dssp             TCCE
T ss_pred             CCcE
Confidence            6654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.84  E-value=2.7e-18  Score=122.49  Aligned_cols=174  Identities=11%  Similarity=0.078  Sum_probs=128.0

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--ccc----
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNV----   84 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~----   84 (198)
                      +++++++.++.|.+||+.+++....+..   ..   .+..++|+|+++.+++++..++.|.+||+.+....  +..    
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~   78 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITI---ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE   78 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEEC---TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEc---CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence            5788999999999999988876554432   33   47899999999998887778899999998764421  111    


Q ss_pred             -----------c-cCceEEEec------------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          85 -----------H-KDMTSAAAN------------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        85 -----------~-~~~~~~~~~------------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                                 . .+..++++.            .++.|.+||+.+ .+.+..+.. ...+..++|+|++++|+++  ++
T Consensus        79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~  154 (337)
T 1pby_B           79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRKAFEA-PRQITMLAWARDGSKLYGL--GR  154 (337)
T ss_dssp             EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SS
T ss_pred             cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-CcEEEEEeC-CCCcceeEECCCCCEEEEe--CC
Confidence                       1 122455553            579999999987 555555553 4457889999999988887  68


Q ss_pred             cEEEEEcCCCceeeEEecc-------------------------------------------------------------
Q psy8758         141 SLRLYLAHQGHSRDIYHTK-------------------------------------------------------------  159 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~-------------------------------------------------------------  159 (198)
                      .|.+||+.+++....+..+                                                             
T Consensus       155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~  234 (337)
T 1pby_B          155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR  234 (337)
T ss_dssp             SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred             eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence            8999999887665433111                                                             


Q ss_pred             ----CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         160 ----RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       160 ----~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                          +...+.+++|+|+|++++++  ++.|++||+.+++.+
T Consensus       235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~  273 (337)
T 1pby_B          235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI  273 (337)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred             ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence                11234568999999998887  799999999988754

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.84  E-value=2.4e-19  Score=140.65  Aligned_cols=182  Identities=12%  Similarity=0.050  Sum_probs=130.4

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .|.+++|||||++|++++. +.|++||+.++.  ....+..  +...+..++|+||++.++++.  ++.|++||+.+...
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~--~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~  184 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH--GEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQ  184 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC--SSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEE
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc--CCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCE
Confidence            3789999999999999886 899999998772  2333332  356789999999999998764  56899999875321


Q ss_pred             c----------------------------cccc-cCceEEEecCCC---------------------------------c
Q psy8758          81 P----------------------------LNVH-KDMTSAAANEDF---------------------------------N   98 (198)
Q Consensus        81 ~----------------------------~~~~-~~~~~~~~~~~~---------------------------------~   98 (198)
                      .                            +... .+..++.++.|+                                 .
T Consensus       185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~  264 (741)
T 2ecf_A          185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK  264 (741)
T ss_dssp             EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred             EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence            1                            0111 123355554443                                 7


Q ss_pred             EEEEEccC-CCcceeeec--CCCcceEEEEEccCCCEEEEeec-----CCcEEEEEcCCCceeeEEeccCcc---cEEEE
Q psy8758          99 LYSYDIRQ-LNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGY-----DKSLRLYLAHQGHSRDIYHTKRMQ---HVTHT  167 (198)
Q Consensus        99 i~~~d~~~-~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~-----d~~v~v~d~~~~~~~~~~~~~~~~---~v~~~  167 (198)
                      |++||+.+ .. ......  .+...+..++| |||++|++++.     +..|++||+.+++...........   .+..+
T Consensus       265 l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~  342 (741)
T 2ecf_A          265 LGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL  342 (741)
T ss_dssp             EEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred             EEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence            88888875 32 222221  46778999999 99999987654     568999999999877665322222   34688


Q ss_pred             EEcCCCCEEEEecCCCeEEEEecC
Q psy8758         168 VWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       168 ~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +|+|||+++++++.||.+++|.++
T Consensus       343 ~~spdg~~~~~~~~~g~~~l~~~~  366 (741)
T 2ecf_A          343 RFLDDGSILWSSERTGFQHLYRID  366 (741)
T ss_dssp             EECTTSCEEEEECTTSSCEEEEEC
T ss_pred             EECCCCeEEEEecCCCccEEEEEc
Confidence            999999988888889987777665

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.84  E-value=5.1e-19  Score=138.18  Aligned_cols=181  Identities=12%  Similarity=0.104  Sum_probs=129.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC-----
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ-----   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-----   77 (198)
                      .|.+++|||| +.++.+ .++.+++||+.+++.. .+.  .+...+..++|+|+++.++++  .++.|++||+.+     
T Consensus        83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~-~l~--~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~  155 (706)
T 2z3z_A           83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVT-YLF--DTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGM  155 (706)
T ss_dssp             CCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEE-EEE--CCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCC
T ss_pred             CceeEEECCC-CeEEEE-ECCEEEEEECCCCceE-Ecc--CCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccC
Confidence            5899999999 655555 3589999999877532 222  235668899999999999874  579999999876     


Q ss_pred             CCCc--cc-c------------------------ccCceEEEec---------------------------------CCC
Q psy8758          78 LNSP--LN-V------------------------HKDMTSAAAN---------------------------------EDF   97 (198)
Q Consensus        78 ~~~~--~~-~------------------------~~~~~~~~~~---------------------------------~~~   97 (198)
                      ....  .. .                        ..+..+++++                                 .+.
T Consensus       156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~  235 (706)
T 2z3z_A          156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV  235 (706)
T ss_dssp             CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred             CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence            4321  00 0                        1123455554                                 446


Q ss_pred             cEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCC-----cEEEEEcCCC-ceeeEEeccCcc---cEEE
Q psy8758          98 NLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDK-----SLRLYLAHQG-HSRDIYHTKRMQ---HVTH  166 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~-----~v~v~d~~~~-~~~~~~~~~~~~---~v~~  166 (198)
                      .|++||+.+ ++.....  ..+...+..++|+|||+.|++++.++     .|++||+.++ .........+..   .+..
T Consensus       236 ~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~  314 (706)
T 2z3z_A          236 TVGIYHLAT-GKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP  314 (706)
T ss_dssp             EEEEEETTT-TEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred             EEEEEECCC-CceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence            799999987 4433322  24567789999999999999887765     8999999998 443333222222   2467


Q ss_pred             EEEcC--CCCEEEEecCCCeEEEEecC
Q psy8758         167 TVWSL--DNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       167 ~~~s~--~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ++|+|  ||+++++++.|+.+++|+++
T Consensus       315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~  341 (706)
T 2z3z_A          315 LTFLPGSNNQFIWQSRRDGWNHLYLYD  341 (706)
T ss_dssp             CEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred             ceeecCCCCEEEEEEccCCccEEEEEE
Confidence            89999  99999999999999999876

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.83  E-value=1.7e-18  Score=124.14  Aligned_cols=183  Identities=10%  Similarity=0.086  Sum_probs=130.5

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cc
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LN   83 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~   83 (198)
                      .++++++++++++++.++.|++||+.+++....+... ....+..++|+|+++.+++++..++.|.+||+.+....  +.
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~   82 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN   82 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS-SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC-CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence            5678899999999999999999999888765554432 11156789999999988877778899999998754321  11


Q ss_pred             ----------------cc-cCceEEEecC------------CCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCCC
Q psy8758          84 ----------------VH-KDMTSAAANE------------DFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTGR  131 (198)
Q Consensus        84 ----------------~~-~~~~~~~~~~------------~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~~  131 (198)
                                      .. .+..++++..            ++.|.+||+.+ ++.   +..+. +...+.+++|+|+|+
T Consensus        83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~s~dg~  160 (349)
T 1jmx_B           83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD-GLEAKPVRTFP-MPRQVYLMRAADDGS  160 (349)
T ss_dssp             SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG-GGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred             cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC-ccccceeeecc-CCCcccceeECCCCc
Confidence                            11 1234555554            48999999986 222   22333 344688999999999


Q ss_pred             EEEEeecCCcEEEEEcCCCceeeEEeccC---------------------------------------------------
Q psy8758         132 EFVAGGYDKSLRLYLAHQGHSRDIYHTKR---------------------------------------------------  160 (198)
Q Consensus       132 ~l~~~~~d~~v~v~d~~~~~~~~~~~~~~---------------------------------------------------  160 (198)
                       +++++  +.|.+||+.+++....+..+.                                                   
T Consensus       161 -l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  237 (349)
T 1jmx_B          161 -LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS  237 (349)
T ss_dssp             -EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred             -EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence             55554  349999999887665542221                                                   


Q ss_pred             ----------------cccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         161 ----------------MQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       161 ----------------~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                                      ...+..++|+| ++++++++  ++.|.+||+.+++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~  288 (349)
T 1jmx_B          238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLI  288 (349)
T ss_dssp             EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEE
T ss_pred             EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEE
Confidence                            01355778889 99998887  889999999988754

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.83  E-value=3.7e-18  Score=123.64  Aligned_cols=187  Identities=9%  Similarity=-0.002  Sum_probs=129.4

Q ss_pred             EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee----ecCceeeEEeCCCCCeEEEEecC-CccE
Q psy8758           6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV----MSLRSNMVSWNPMEAFVFTAANE-DFNL   70 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~-d~~i   70 (198)
                      .++|+|||++++++.          .++.|.+||..+.+....+....    +......++|+|++++++++... ++.|
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v  133 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI  133 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence            789999999999886          36689999998877666654321    12346789999999999987543 6899


Q ss_pred             EEEeccCCCCccc-------------cccCceEEEecCCCcEEEEEccCCCcce--------------------------
Q psy8758          71 YSYDIRQLNSPLN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPL--------------------------  111 (198)
Q Consensus        71 ~~~d~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~--------------------------  111 (198)
                      .+||+.+.+....             ......+++.+.||.+.+++....++..                          
T Consensus       134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  213 (361)
T 2oiz_A          134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK  213 (361)
T ss_dssp             EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred             EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence            9999976543211             1112345566667776666654312111                          


Q ss_pred             ----------eeecCC-----------------------CcceEEEEEccCCCEEEEeec-----------CCcEEEEEc
Q psy8758         112 ----------NVHKDM-----------------------TSAVTSVDYSPTGREFVAGGY-----------DKSLRLYLA  147 (198)
Q Consensus       112 ----------~~~~~~-----------------------~~~i~~~~~sp~~~~l~~~~~-----------d~~v~v~d~  147 (198)
                                ..+...                       ......++|+|+++.++++..           .+.|.+||+
T Consensus       214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~  293 (361)
T 2oiz_A          214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT  293 (361)
T ss_dssp             EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred             EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence                      000000                       000112788999887766543           348999999


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC--ccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~--~~~  196 (198)
                      .+++.+..+..+ .  +.+++|+|||++|++++. +.|.+||..++  +.+
T Consensus       294 ~t~~~v~~i~~~-~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~  340 (361)
T 2oiz_A          294 KTKQRVARIPGR-D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL  340 (361)
T ss_dssp             TTTEEEEEEECT-T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred             CCCcEEEEEecC-C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence            999998887444 3  999999999999998876 99999999999  654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.82  E-value=2.7e-19  Score=136.96  Aligned_cols=183  Identities=11%  Similarity=0.075  Sum_probs=129.2

Q ss_pred             ceeEEEECCCCceEEEeeC---CCeEEEEEccC--CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASD---EMNLRVWKAHA--SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .+..++|||| +.+++++.   +...++|.+..  ......+..   .......+|+|+++.++.+...++.+.+||+.+
T Consensus        66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~---~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~  141 (582)
T 3o4h_A           66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA---VKPMRILSGVDTGEAVVFTGATEDRVALYALDG  141 (582)
T ss_dssp             EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTT---SCSBEEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred             ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccC---CCCceeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence            5788999999 77777664   45566766543  222222222   223446789999876554444556666999876


Q ss_pred             CCCc-ccc---------ccCceEEEecCC----CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC--c
Q psy8758          78 LNSP-LNV---------HKDMTSAAANED----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--S  141 (198)
Q Consensus        78 ~~~~-~~~---------~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--~  141 (198)
                      .... +..         ..+..++.++.+    ..|++||+.+ ++ ...+..+...+..++|||||+.|+++..++  .
T Consensus       142 g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~  219 (582)
T 3o4h_A          142 GGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREAR  219 (582)
T ss_dssp             TEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred             CcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeE
Confidence            5321 111         223445655555    6799999886 33 446777888899999999999999888888  8


Q ss_pred             EEEEEcCCCceeeEEeccCcccEEEEE--------EcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         142 LRLYLAHQGHSRDIYHTKRMQHVTHTV--------WSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |++||+.+++.. .. .+|...+..++        |+|||.++++++.|+.+++|++  |+.
T Consensus       220 i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~  277 (582)
T 3o4h_A          220 LVTVDPRDGSVE-DL-ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GER  277 (582)
T ss_dssp             EEEECTTTCCEE-EC-CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEE
T ss_pred             EEEEcCCCCcEE-Ec-cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCe
Confidence            999999998877 33 56656666666        9999988899999999999998  554

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.81  E-value=2.6e-19  Score=140.14  Aligned_cols=188  Identities=11%  Similarity=0.187  Sum_probs=126.6

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee-cCceeeEEeCCCCCeEEEEec--------CCccEEEEec
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM-SLRSNMVSWNPMEAFVFTAAN--------EDFNLYSYDI   75 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~--------~d~~i~~~d~   75 (198)
                      .+++|+|+|++++++ .|+.|++||+.+++....+..... ...+.+++|+||++.++++..        .++.|++||+
T Consensus        19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~   97 (719)
T 1z68_A           19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL   97 (719)
T ss_dssp             CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence            367999999766554 699999999988875443332111 113789999999999987643        2689999998


Q ss_pred             cCCCC----ccc-------cc-cCceEEEecCCCcEEEEEccCCCcceeee-cCCCcce-----------------EEEE
Q psy8758          76 RQLNS----PLN-------VH-KDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAV-----------------TSVD  125 (198)
Q Consensus        76 ~~~~~----~~~-------~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i-----------------~~~~  125 (198)
                      .+...    .+.       .. .+..++.+ .++.|++||+.+ ++..... .++...+                 .+++
T Consensus        98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~-g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~  175 (719)
T 1z68_A           98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPG-DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW  175 (719)
T ss_dssp             TTTEECCSSCCCSSBCCEEECSSTTCEEEE-ETTEEEEESSTT-SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred             CCCccccceecCcccccceECCCCCEEEEE-ECCeEEEEeCCC-CCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence            75532    111       11 12234444 478999999986 3433322 2222212                 4899


Q ss_pred             EccCCCEEEEeecCC----------------------------------cEEEEEcCCCcee---eEE----eccCcccE
Q psy8758         126 YSPTGREFVAGGYDK----------------------------------SLRLYLAHQGHSR---DIY----HTKRMQHV  164 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~----------------------------------~v~v~d~~~~~~~---~~~----~~~~~~~v  164 (198)
                      |||||++|++++.|.                                  .|++||+.+++..   ...    ..+|...+
T Consensus       176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  255 (719)
T 1z68_A          176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF  255 (719)
T ss_dssp             ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred             ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence            999999999887652                                  7889999887653   111    12467789


Q ss_pred             EEEEEcCCCCEEEEecCC----CeEEEEe----cCCCcc
Q psy8758         165 THTVWSLDNKFVISASDE----MNLRVWK----AHASEK  195 (198)
Q Consensus       165 ~~~~~s~~~~~l~~~~~d----g~v~~w~----~~~~~~  195 (198)
                      ..++||||++++++....    ..|++||    +.+++.
T Consensus       256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~  294 (719)
T 1z68_A          256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC  294 (719)
T ss_dssp             EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred             EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence            999999998877764322    3488899    777664

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.81  E-value=2.4e-18  Score=139.68  Aligned_cols=181  Identities=14%  Similarity=0.086  Sum_probs=140.5

Q ss_pred             ceeEEEEC-CCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecC-ceeeEEeCCCCCeEEEEecCCccEE-EEeccCCC
Q psy8758           3 HVTHTVWS-LDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL-RSNMVSWNPMEAFVFTAANEDFNLY-SYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s-~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~~i~-~~d~~~~~   79 (198)
                      .+.+++|| |+|+++++++ ++.+.+|++.+++.. .+..  +.. .+..++|+ +++.+++++ .+..++ +|++....
T Consensus       297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~--~~~~~~~~~~~s-dg~~l~~~s-~~~~l~~~~d~~~~~  370 (1045)
T 1k32_A          297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPE--PLRIRYVRRGGD-TKVAFIHGT-REGDFLGIYDYRTGK  370 (1045)
T ss_dssp             GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSC--CSCEEEEEECSS-SEEEEEEEE-TTEEEEEEEETTTCC
T ss_pred             ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccC--CCcceEEeeeEc-CCCeEEEEE-CCCceEEEEECCCCC
Confidence            58899999 9999999887 789999999776532 2222  344 68899999 999888765 578888 89976543


Q ss_pred             C-ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC-------
Q psy8758          80 S-PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK-------  140 (198)
Q Consensus        80 ~-~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~-------  140 (198)
                      . .+..+           .+..+++++.++.+++||+.+ ++.......|...+.+++|||||++|++++.++       
T Consensus       371 ~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~  449 (1045)
T 1k32_A          371 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY  449 (1045)
T ss_dssp             EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred             ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence            1 11111           234678888999999999987 566666667888899999999999998887654       


Q ss_pred             ---cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         141 ---SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       141 ---~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                         .|++||+.+++. ..+ ..|...+..++|+|||++|++++.++...+|+...
T Consensus       450 ~~~~i~l~d~~~g~~-~~l-~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~  502 (1045)
T 1k32_A          450 VMQAIHVYDMEGRKI-FAA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV  502 (1045)
T ss_dssp             CEEEEEEEETTTTEE-EEC-SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred             CCCeEEEEECCCCcE-EEe-eCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence               899999998873 333 56677889999999999999998888888887653

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.81  E-value=2e-17  Score=119.85  Aligned_cols=170  Identities=7%  Similarity=0.033  Sum_probs=110.2

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeE-EEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFV-FTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .+..++|+|+|++|++++.+ .+.+|++. +++..... .....+.+..++|+|+++.+ +.+++ .+....        
T Consensus        41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-~~~~~g~~~~~~~spdg~~l~~~~~~-~~~~~~--------  109 (365)
T 1jof_A           41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-SHPIGGHPRANDADTNTRAIFLLAAK-QPPYAV--------  109 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-EEECCSSGGGGCTTSCCEEEEEEECS-STTCCE--------
T ss_pred             CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-EeecCCCCccEEECCCCCEEEEEEec-CCccee--------
Confidence            56789999999999998887 99999997 66543222 22212346679999999963 33332 110000        


Q ss_pred             ccccccCceEEEec----CCCcEEEEEccCCCcceeeec----CCCcceEEEEEccCCCEEEEeec-CCcEEEEEcC-CC
Q psy8758          81 PLNVHKDMTSAAAN----EDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAH-QG  150 (198)
Q Consensus        81 ~~~~~~~~~~~~~~----~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~-~~  150 (198)
                                 .+.    .++.+.+|++...++....+.    .+...+.+++|+|||+++++++. ++.|++|++. ++
T Consensus       110 -----------~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g  178 (365)
T 1jof_A          110 -----------YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG  178 (365)
T ss_dssp             -----------EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred             -----------ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC
Confidence                       000    234445555442133222222    24567899999999998887654 6799999998 67


Q ss_pred             ceeeE--Eec-cCcccEEEEEEcCCCCEEEEecC-CCeEEEEecC--CCc
Q psy8758         151 HSRDI--YHT-KRMQHVTHTVWSLDNKFVISASD-EMNLRVWKAH--ASE  194 (198)
Q Consensus       151 ~~~~~--~~~-~~~~~v~~~~~s~~~~~l~~~~~-dg~v~~w~~~--~~~  194 (198)
                      +....  +.. .|...+..++|+|||+++++++. ++.|.+|+++  +++
T Consensus       179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~  228 (365)
T 1jof_A          179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHM  228 (365)
T ss_dssp             CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred             CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence            65332  211 23567999999999998877664 7899999765  454

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.80  E-value=7.1e-19  Score=137.64  Aligned_cols=186  Identities=12%  Similarity=0.057  Sum_probs=126.3

Q ss_pred             ceeEEEECCCCceEEEeeC---------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASD---------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      .+.+++|||||++|+.++.         ++.|++||+.+++.... ...  ...+..++|+|||+.++++  .++.|++|
T Consensus        61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l--~~~~~~~~~SPDG~~la~~--~~~~i~~~  135 (719)
T 1z68_A           61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NEL--PRPIQYLCWSPVGSKLAYV--YQNNIYLK  135 (719)
T ss_dssp             TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCC--CSSBCCEEECSSTTCEEEE--ETTEEEEE
T ss_pred             ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eec--CcccccceECCCCCEEEEE--ECCeEEEE
Confidence            3789999999999998876         68999999988764210 111  2457889999999999876  37899999


Q ss_pred             eccCCCCc------------------------------cccc-cCceEEEecCCC-------------------------
Q psy8758          74 DIRQLNSP------------------------------LNVH-KDMTSAAANEDF-------------------------   97 (198)
Q Consensus        74 d~~~~~~~------------------------------~~~~-~~~~~~~~~~~~-------------------------   97 (198)
                      ++.+....                              +... .+..++.++.|.                         
T Consensus       136 ~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp  215 (719)
T 1z68_A          136 QRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP  215 (719)
T ss_dssp             SSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred             eCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence            98653311                              1111 123455544331                         


Q ss_pred             ---------cEEEEEccCCCcce--------eeecCCCcceEEEEEccCCCEEEEeecC----CcEEEEE----cCCCce
Q psy8758          98 ---------NLYSYDIRQLNSPL--------NVHKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYL----AHQGHS  152 (198)
Q Consensus        98 ---------~i~~~d~~~~~~~~--------~~~~~~~~~i~~~~~sp~~~~l~~~~~d----~~v~v~d----~~~~~~  152 (198)
                               .|++||+.+ ++..        ..+..|...+..++|+||++++++....    ..|.+||    +.+++.
T Consensus       216 ~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~  294 (719)
T 1z68_A          216 KAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC  294 (719)
T ss_dssp             BTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred             CCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence                     788999886 3321        1233577789999999998877764432    2488899    777765


Q ss_pred             eeEEe---ccCcccEE-----EEEEcCCCCEEEE--ecCCC--eEEEEecCCCc
Q psy8758         153 RDIYH---TKRMQHVT-----HTVWSLDNKFVIS--ASDEM--NLRVWKAHASE  194 (198)
Q Consensus       153 ~~~~~---~~~~~~v~-----~~~~s~~~~~l~~--~~~dg--~v~~w~~~~~~  194 (198)
                      .....   .+|...+.     .+.|+|||+.|+.  +..+|  .|++||+.+++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~  348 (719)
T 1z68_A          295 PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN  348 (719)
T ss_dssp             CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred             EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence            54432   35556665     7899999996543  44455  57777877654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.80  E-value=3.7e-18  Score=124.35  Aligned_cols=183  Identities=13%  Similarity=0.093  Sum_probs=123.4

Q ss_pred             EEECCCCceEEEeeC-CC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc-
Q psy8758           7 TVWSLDNKFVISASD-EM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL-   82 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~-d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~-   82 (198)
                      .+|||||++|+.++. ++  .|.+||+.+++.......  +...+..+.|+|+++.|+++. .++.+++||+.+..... 
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~--~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~g~~~~~  117 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG--RGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATLEENVV  117 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS--SCBCSSSCEECTTSSEEEEEE-TTTEEEEEETTTCCEEEE
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC--CCCCccceEEcCCCCEEEEEe-CCCeEEEEECCCCcceee
Confidence            789999999998887 66  488888877764332221  233344678999999998864 67899999998654321 


Q ss_pred             -ccc-------------cCceEEE----------------------ecCCCcEEEEEccCCCcceeeecCCCcceEEEEE
Q psy8758          83 -NVH-------------KDMTSAA----------------------ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY  126 (198)
Q Consensus        83 -~~~-------------~~~~~~~----------------------~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~  126 (198)
                       ..+             .+..++.                      ...+..|++||+.+ ++ ...+..+...+..++|
T Consensus       118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-g~-~~~l~~~~~~~~~~~~  195 (388)
T 3pe7_A          118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT-GE-STVILQENQWLGHPIY  195 (388)
T ss_dssp             EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT-CC-EEEEEEESSCEEEEEE
T ss_pred             eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC-Cc-eEEeecCCccccccEE
Confidence             111             1111221                      22446788999887 33 4445456667899999


Q ss_pred             cc-CCCEEEEeecC------CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecC-C----CeEEEEecCCC
Q psy8758         127 SP-TGREFVAGGYD------KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASD-E----MNLRVWKAHAS  193 (198)
Q Consensus       127 sp-~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~-d----g~v~~w~~~~~  193 (198)
                      +| ||+.|+....+      ..|.++|...+...... .... ..+..++|+|||+.|+..+. +    ..|++||+.++
T Consensus       196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g  274 (388)
T 3pe7_A          196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK-THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL  274 (388)
T ss_dssp             ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC-CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred             CCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee-eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence            99 99988877653      37888887766554433 2221 35788999999997765432 2    23999999988


Q ss_pred             cc
Q psy8758         194 EK  195 (198)
Q Consensus       194 ~~  195 (198)
                      +.
T Consensus       275 ~~  276 (388)
T 3pe7_A          275 EN  276 (388)
T ss_dssp             CE
T ss_pred             ce
Confidence            73

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.79  E-value=3.4e-17  Score=118.69  Aligned_cols=190  Identities=11%  Similarity=0.084  Sum_probs=124.9

Q ss_pred             eeEEEECCCCce--EEEee-------------CCCeEEEEEcc-CCceeeeeeee--eecCceeeEEeCCCCCeEEEEec
Q psy8758           4 VTHTVWSLDNKF--VISAS-------------DEMNLRVWKAH-ASEKLGPIRKV--VMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         4 v~~~~~s~~~~~--l~~~~-------------~d~~i~i~~~~-~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      +.+++|+|+|++  ++++.             .++.+.+|++. +++....+...  .+...+.+++|+|++++++++..
T Consensus        85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~  164 (365)
T 1jof_A           85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL  164 (365)
T ss_dssp             GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred             CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence            455789999994  55553             68999999997 45543333322  13456889999999999887655


Q ss_pred             CCccEEEEecc-CCCCc----cc--c----------c-cCceEEE-ecCCCcEEEEEccCC-Ccce---eeec---C---
Q psy8758          66 EDFNLYSYDIR-QLNSP----LN--V----------H-KDMTSAA-ANEDFNLYSYDIRQL-NSPL---NVHK---D---  116 (198)
Q Consensus        66 ~d~~i~~~d~~-~~~~~----~~--~----------~-~~~~~~~-~~~~~~i~~~d~~~~-~~~~---~~~~---~---  116 (198)
                      .++.|++|++. +....    +.  .          + .+..+++ ...++.+.+|++... ++..   ..+.   .   
T Consensus       165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~  244 (365)
T 1jof_A          165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP  244 (365)
T ss_dssp             TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred             CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence            57899999987 33211    11  0          1 1123444 445788999987531 2221   1121   1   


Q ss_pred             -CCc------ceEEEE-EccCCCEEEEeecC-C-----cEEEEEcC-CCceeeEE--eccCcccEEEEEEcC---CCCEE
Q psy8758         117 -MTS------AVTSVD-YSPTGREFVAGGYD-K-----SLRLYLAH-QGHSRDIY--HTKRMQHVTHTVWSL---DNKFV  176 (198)
Q Consensus       117 -~~~------~i~~~~-~sp~~~~l~~~~~d-~-----~v~v~d~~-~~~~~~~~--~~~~~~~v~~~~~s~---~~~~l  176 (198)
                       +..      .+..++ |+|||++|++++.+ +     .|.+|++. +++.....  ...+...+..++|+|   ||++|
T Consensus       245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l  324 (365)
T 1jof_A          245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM  324 (365)
T ss_dssp             CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred             CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence             121      478999 99999988876643 2     89999996 56554321  122334566789999   89999


Q ss_pred             EEecC-CCeEEEEecCCC
Q psy8758         177 ISASD-EMNLRVWKAHAS  193 (198)
Q Consensus       177 ~~~~~-dg~v~~w~~~~~  193 (198)
                      ++++. ++.|.+|+++..
T Consensus       325 ~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          325 AITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EEECSSSCEEEEEEEETT
T ss_pred             EEEEcCCCeEEEEEEchh
Confidence            98876 489999998765

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.77  E-value=2e-17  Score=129.96  Aligned_cols=152  Identities=16%  Similarity=0.220  Sum_probs=103.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeec---CceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMS---LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ....++|+|+|++++++  |+.|++||+.+++....+..+...   .....+.||||++.++++. .+..+  |..    
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~-~~~~~--~r~----   88 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY-NYVKQ--WRH----   88 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEE-EEEEC--SSS----
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEE-CCeee--EEE----
Confidence            35689999999998886  899999999988765444332211   1123478999999998764 33221  110    


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK  159 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~  159 (198)
                                    +..+.+++||+.+ ++ ...+..+...+...+|||||+.||.+. ++.|++|++.+++.......+
T Consensus        89 --------------~~~~~~~~~d~~~-~~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g  151 (740)
T 4a5s_A           89 --------------SYTASYDIYDLNK-RQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG  151 (740)
T ss_dssp             --------------CEEEEEEEEETTT-TE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC
T ss_pred             --------------ccceEEEEEECCC-Cc-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC
Confidence                          0123355566554 33 344566777899999999999999884 789999999988765543233


Q ss_pred             CcccE-----------------EEEEEcCCCCEEEEec
Q psy8758         160 RMQHV-----------------THTVWSLDNKFVISAS  180 (198)
Q Consensus       160 ~~~~v-----------------~~~~~s~~~~~l~~~~  180 (198)
                      +...+                 ..+.|||||+.||..+
T Consensus       152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~  189 (740)
T 4a5s_A          152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ  189 (740)
T ss_dssp             BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred             CccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence            32222                 3489999999998764

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.75  E-value=7.6e-16  Score=110.14  Aligned_cols=192  Identities=11%  Similarity=0.051  Sum_probs=134.2

Q ss_pred             CcceeEEEECCCCceEEEeeCC------------------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDE------------------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM   56 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d------------------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   56 (198)
                      ++.+.+++++|+|+++++...+                        +.|.+||..+++....... ..-..+..++++|+
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~p~gia~d~~  101 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK-NLFYLPHGLSIDTD  101 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT-TTCSSEEEEEECTT
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC-CccCCceEEEECCC
Confidence            3578999999999988887766                        4799999988875443321 12235789999999


Q ss_pred             CCeEEEEecCCccEEEEeccCCC---Ccc-------------------ccc--cCceEEEec-CCCcEEEEEccCCCcce
Q psy8758          57 EAFVFTAANEDFNLYSYDIRQLN---SPL-------------------NVH--KDMTSAAAN-EDFNLYSYDIRQLNSPL  111 (198)
Q Consensus        57 ~~~~~~~~~~d~~i~~~d~~~~~---~~~-------------------~~~--~~~~~~~~~-~~~~i~~~d~~~~~~~~  111 (198)
                      ++.+ ++...++.|+.||.....   ..+                   ...  .+.++++.+ .++.|++||..  +..+
T Consensus       102 g~l~-v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~--g~~~  178 (329)
T 3fvz_A          102 GNYW-VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS--GKFV  178 (329)
T ss_dssp             SCEE-EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT--SCEE
T ss_pred             CCEE-EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC--CCEE
Confidence            9954 555678999999976431   111                   111  234556654 68889999944  4555


Q ss_pred             eeecC----------CCcceEEEEEccC-CCEEEEeecCCcEEEEEcCCCceeeEEe-ccCcccEEEEEEcC------CC
Q psy8758         112 NVHKD----------MTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWSL------DN  173 (198)
Q Consensus       112 ~~~~~----------~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~~~~~~~~~-~~~~~~v~~~~~s~------~~  173 (198)
                      ..+..          +-.....++++|+ ++++++...++.|++||..+++.+..+. ..+...+..++|+|      +|
T Consensus       179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g  258 (329)
T 3fvz_A          179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG  258 (329)
T ss_dssp             EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred             EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence            55532          1234789999999 7777777889999999999888877663 23456788999999      33


Q ss_pred             CEEEEecCCCeEEEEecCCCccc
Q psy8758         174 KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       174 ~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+++...+..|++|++.+++.+
T Consensus       259 ~~~v~~~~~~~v~~~~~~~g~~~  281 (329)
T 3fvz_A          259 KPYFGDQEPVQGFVMNFSSGEII  281 (329)
T ss_dssp             CCCTTCSCCCCEEEEETTTCCEE
T ss_pred             CEEeccCCCcEEEEEEcCCCeEE
Confidence            33333344568999999888764

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.74  E-value=2.4e-16  Score=123.92  Aligned_cols=186  Identities=11%  Similarity=0.101  Sum_probs=122.6

Q ss_pred             eEEEECCCCceEEEeeCC---------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           5 THTVWSLDNKFVISASDE---------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      ..++|||||++|+.++.+         +.+.+||+.+++.. .+..  +...+..++|||||+.|+.+  .++.|++|++
T Consensus        65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~--~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~  139 (740)
T 4a5s_A           65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEER--IPNNTQWVTWSPVGHKLAYV--WNNDIYVKIE  139 (740)
T ss_dssp             CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSC--CCTTEEEEEECSSTTCEEEE--ETTEEEEESS
T ss_pred             cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-Eccc--CCCcceeeEECCCCCEEEEE--ECCeEEEEEC
Confidence            348899999999998876         56679999887643 3332  35668899999999999876  4689999998


Q ss_pred             cCCCCc-----------ccc-------------------c-cCceEEEecCC----------------------------
Q psy8758          76 RQLNSP-----------LNV-------------------H-KDMTSAAANED----------------------------   96 (198)
Q Consensus        76 ~~~~~~-----------~~~-------------------~-~~~~~~~~~~~----------------------------   96 (198)
                      ......           +.+                   . .+..++....|                            
T Consensus       140 ~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp  219 (740)
T 4a5s_A          140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYP  219 (740)
T ss_dssp             TTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECC
T ss_pred             CCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCC
Confidence            653311           100                   1 11223332111                            


Q ss_pred             --------CcEEEEEccC---CCc-ceeeec------CCCcceEEEEEccCCCEEEEeec----CCcEEEEEcCCCc---
Q psy8758          97 --------FNLYSYDIRQ---LNS-PLNVHK------DMTSAVTSVDYSPTGREFVAGGY----DKSLRLYLAHQGH---  151 (198)
Q Consensus        97 --------~~i~~~d~~~---~~~-~~~~~~------~~~~~i~~~~~sp~~~~l~~~~~----d~~v~v~d~~~~~---  151 (198)
                              .+|++||+.+   ... ....+.      .+...+..++|+|||+.++....    +..|++||+.+++   
T Consensus       220 ~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~  299 (740)
T 4a5s_A          220 KAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW  299 (740)
T ss_dssp             BTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEE
T ss_pred             CCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccc
Confidence                    1477788875   321 222333      26777999999999996665432    3479999999887   


Q ss_pred             ----eeeEEeccCcccEE-----EEEEcCCCCEEE-Eec-CC--CeEEEEecCCCcc
Q psy8758         152 ----SRDIYHTKRMQHVT-----HTVWSLDNKFVI-SAS-DE--MNLRVWKAHASEK  195 (198)
Q Consensus       152 ----~~~~~~~~~~~~v~-----~~~~s~~~~~l~-~~~-~d--g~v~~w~~~~~~~  195 (198)
                          ....+...|...+.     .+.|+|||+.|+ ..+ .+  ..|++||+.+++.
T Consensus       300 ~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~  356 (740)
T 4a5s_A          300 NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC  356 (740)
T ss_dssp             EECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred             ceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence                22232344555544     789999999776 554 33  4688888877654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.74  E-value=6.2e-16  Score=120.02  Aligned_cols=190  Identities=14%  Similarity=0.131  Sum_probs=128.7

Q ss_pred             cceeEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCcee---------eEEeC--CCCCe-EEEEecCC
Q psy8758           2 QHVTHTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSN---------MVSWN--PMEAF-VFTAANED   67 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~~~~d   67 (198)
                      ..+..++|++++.+++..  +.++...||....+.....+...  ...+.         ...|+  ||++. ++.+...+
T Consensus        24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~  101 (662)
T 3azo_A           24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPA--PWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD  101 (662)
T ss_dssp             SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCT--TCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred             CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCC--CccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence            357889999887677766  56888999996444433444322  22333         45565  99998 87765557


Q ss_pred             ccEEEEecc----CCCCcccc-----c-----------cCceEEEecCC----------CcEEEEEccCCC----cceee
Q psy8758          68 FNLYSYDIR----QLNSPLNV-----H-----------KDMTSAAANED----------FNLYSYDIRQLN----SPLNV  113 (198)
Q Consensus        68 ~~i~~~d~~----~~~~~~~~-----~-----------~~~~~~~~~~~----------~~i~~~d~~~~~----~~~~~  113 (198)
                      ..|+++++.    .....+..     +           .+..++..+.+          ..|++||+....    .....
T Consensus       102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  181 (662)
T 3azo_A          102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE  181 (662)
T ss_dssp             CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred             CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence            788888876    22222222     1           12345555544          578999987521    34455


Q ss_pred             ec-CCCcceEEEEEccCCCEEEEeecC--------CcEEEEEcC-CC---ceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758         114 HK-DMTSAVTSVDYSPTGREFVAGGYD--------KSLRLYLAH-QG---HSRDIYHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       114 ~~-~~~~~i~~~~~sp~~~~l~~~~~d--------~~v~v~d~~-~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      +. .+...+..++|||||++|+.++.+        ..|++||+. ++   +... +..++...+..+.|+|||++++++.
T Consensus       182 l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~-l~~~~~~~~~~~~~spdg~l~~~~~  260 (662)
T 3azo_A          182 LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT-LLGGPEEAIAQAEWAPDGSLIVATD  260 (662)
T ss_dssp             SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE-EEEETTBCEEEEEECTTSCEEEEEC
T ss_pred             EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE-eCCCCCceEcceEECCCCeEEEEEC
Confidence            55 566778889999999999987755        379999999 56   3333 3345567899999999999877887


Q ss_pred             CCC--eEEEEecCCCc
Q psy8758         181 DEM--NLRVWKAHASE  194 (198)
Q Consensus       181 ~dg--~v~~w~~~~~~  194 (198)
                      .++  .|++||+.+++
T Consensus       261 ~~~~~~l~~~~~~~~~  276 (662)
T 3azo_A          261 RTGWWNLHRVDPATGA  276 (662)
T ss_dssp             TTSSCEEEEECTTTCC
T ss_pred             CCCCeEEEEEECCCCc
Confidence            788  67777776664

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.73  E-value=2.4e-16  Score=114.87  Aligned_cols=185  Identities=16%  Similarity=0.104  Sum_probs=121.2

Q ss_pred             eeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCc-eeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           4 VTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLR-SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.+++|||||++|+.....   ..|.+||+.+++. ..+..  .... ...+.|+|+++.|+.+. .++.+++||+....
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~-~~l~~--~~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~~~  113 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA-VQLTE--GKGDNTFGGFISTDERAFFYVK-NELNLMKVDLETLE  113 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE-EECCC--SSCBCTTTCEECTTSSEEEEEE-TTTEEEEEETTTCC
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE-EEeec--CCCCccccceECCCCCEEEEEE-cCCcEEEEECCCCC
Confidence            5778999999998776543   4688889877653 22222  1222 23478999999998764 66789999987654


Q ss_pred             Cc--cccccC-----ceEEEe------------------------------cCCCcEEEEEccCCCcceeeecCCCcceE
Q psy8758          80 SP--LNVHKD-----MTSAAA------------------------------NEDFNLYSYDIRQLNSPLNVHKDMTSAVT  122 (198)
Q Consensus        80 ~~--~~~~~~-----~~~~~~------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~i~  122 (198)
                      ..  ...+..     ..++..                              ..+..|++||+.+ ++.. .+..+...+.
T Consensus       114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~-g~~~-~~~~~~~~~~  191 (396)
T 3c5m_A          114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET-GELE-VIHQDTAWLG  191 (396)
T ss_dssp             EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT-CCEE-EEEEESSCEE
T ss_pred             cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC-CcEE-eeccCCcccc
Confidence            21  111111     111110                              3456789999986 3433 3334566789


Q ss_pred             EEEEcc-CCCEEEEeecC------CcEEEEEcCCCceeeEEeccC-cccEEEEEEcCCCCEEEEecCC-----CeEEEEe
Q psy8758         123 SVDYSP-TGREFVAGGYD------KSLRLYLAHQGHSRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWK  189 (198)
Q Consensus       123 ~~~~sp-~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~  189 (198)
                      .+.|+| +++.|+..+.+      ..|.+||+..++..... ... ...+..++|+|||++|+..+.+     +.|++||
T Consensus       192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d  270 (396)
T 3c5m_A          192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-EHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN  270 (396)
T ss_dssp             EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS-CCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred             cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee-ccCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence            999999 78877665543      46888998776544332 221 2468889999999987766433     4599999


Q ss_pred             cCCCcc
Q psy8758         190 AHASEK  195 (198)
Q Consensus       190 ~~~~~~  195 (198)
                      +.+++.
T Consensus       271 ~~~g~~  276 (396)
T 3c5m_A          271 PETLEN  276 (396)
T ss_dssp             TTTCCE
T ss_pred             CCCCCe
Confidence            988764

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.73  E-value=4.8e-15  Score=103.77  Aligned_cols=160  Identities=12%  Similarity=0.150  Sum_probs=112.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++++|+|+++++...++.|.+|+.. ++....+........+..++++|+++.+ ++...++.|.+||...     
T Consensus       122 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~-v~~~~~~~i~~~~~~g-----  194 (286)
T 1q7f_A          122 HPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIF-ISDNRAHCVKVFNYEG-----  194 (286)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEE-EEEGGGTEEEEEETTC-----
T ss_pred             CceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEE-EEECCCCEEEEEcCCC-----
Confidence            46889999999988777778899999964 4443333221123457899999988744 4445677888887532     


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCC-cEEEEEcCCCceeeEEecc
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDK-SLRLYLAHQGHSRDIYHTK  159 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~-~v~v~d~~~~~~~~~~~~~  159 (198)
                                                ..+..+..  +...+..++++|+|+++++...++ .|.+||.. ++.+..+...
T Consensus       195 --------------------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~  247 (286)
T 1q7f_A          195 --------------------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESK  247 (286)
T ss_dssp             --------------------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEES
T ss_pred             --------------------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEccc
Confidence                                      23333322  235678999999999888887776 99999964 5554444222


Q ss_pred             -CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         160 -RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       160 -~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                       ....+.+++++|+|+++++ +.|+.|++|++....+++
T Consensus       248 ~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pvg  285 (286)
T 1q7f_A          248 VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPVG  285 (286)
T ss_dssp             SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCTT
T ss_pred             CCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccccC
Confidence             2234789999999987777 568999999998776654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.72  E-value=5.1e-15  Score=105.83  Aligned_cols=189  Identities=13%  Similarity=0.115  Sum_probs=132.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCc-eeeeeee-------eeecCceeeEEeCC-CCCeEEEEec-CCccEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KLGPIRK-------VVMSLRSNMVSWNP-MEAFVFTAAN-EDFNLYS   72 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~~~~~~~-~d~~i~~   72 (198)
                      ....++++|+|+++++...++.|++|+..... .+..+..       ..+-..+..++++| ++..+ ++.+ .++.|++
T Consensus        92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly-v~d~~~~~~I~~  170 (329)
T 3fvz_A           92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF-VSDGYCNSRIVQ  170 (329)
T ss_dssp             SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE-EEECSSCCEEEE
T ss_pred             CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE-EEeCCCCCeEEE
Confidence            46789999999988888888999999975432 2333321       01122468999999 55544 4444 5889999


Q ss_pred             EeccCCCC-c--------------------cc--cccCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEc
Q psy8758          73 YDIRQLNS-P--------------------LN--VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYS  127 (198)
Q Consensus        73 ~d~~~~~~-~--------------------~~--~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~s  127 (198)
                      |+...... .                    +.  ...+.++++...++.|++||..+ ++.+..+.  .+...+..++++
T Consensus       171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~  249 (329)
T 3fvz_A          171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYI  249 (329)
T ss_dssp             ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEE
T ss_pred             EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCcceeeec
Confidence            98532110 0                    00  11245677777888999999985 56666663  355678899999


Q ss_pred             c------CCCEEEEeecCCcEEEEEcCCCceeeEEe--ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         128 P------TGREFVAGGYDKSLRLYLAHQGHSRDIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       128 p------~~~~l~~~~~d~~v~v~d~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      |      +|+.+++...+..|++||..+++.+..+.  ..+...+..++++|+|.++++...++.|++|++...
T Consensus       250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred             CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence            9      33333333345689999999998887763  345567899999999988888888999999998654

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.71  E-value=4.6e-16  Score=120.74  Aligned_cols=166  Identities=10%  Similarity=0.039  Sum_probs=109.0

Q ss_pred             ceeEEEECCCCceEEEeeCC----------CeEEEEEccC------CceeeeeeeeeecCceeeEEeCCCCCeEEEEecC
Q psy8758           3 HVTHTVWSLDNKFVISASDE----------MNLRVWKAHA------SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE   66 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d----------~~i~i~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~   66 (198)
                      .+.+++|||||+.|+.++.+          ..|++||+.+      ++ ...+.. .+...+..++|+|||+.|+.+...
T Consensus       131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~  208 (662)
T 3azo_A          131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSD-DAHRFVTGPRLSPDGRQAVWLAWD  208 (662)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSC-SCSSEECCCEECTTSSEEEEEEEC
T ss_pred             cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEe-cCCCcccCceECCCCCEEEEEECC
Confidence            46789999999999988876          5899999987      43 333330 123567789999999999876532


Q ss_pred             CccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEEccCCCEEEEeecCC--c
Q psy8758          67 DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--S  141 (198)
Q Consensus        67 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--~  141 (198)
                      . ...-|                     ....|++||+...+   ........+...+..++|+|||+++++++.++  .
T Consensus       209 ~-~~~~~---------------------~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~  266 (662)
T 3azo_A          209 H-PRMPW---------------------EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWN  266 (662)
T ss_dssp             T-TCCTT---------------------TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCE
T ss_pred             C-CCCCC---------------------CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeE
Confidence            2 00000                     01234444444112   23333334567889999999999888888888  5


Q ss_pred             EEEEEcCCCceeeEEeccCccc--------EEEEEEcCCCCEEEEecCCCeEEEE--ecCCCc
Q psy8758         142 LRLYLAHQGHSRDIYHTKRMQH--------VTHTVWSLDNKFVISASDEMNLRVW--KAHASE  194 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~~dg~v~~w--~~~~~~  194 (198)
                      |.+||+.+++..... ..+...        +..++|+|++++++++.. +.+++|  |+.+++
T Consensus       267 l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~  327 (662)
T 3azo_A          267 LHRVDPATGAATQLC-RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE  327 (662)
T ss_dssp             EEEECTTTCCEEESS-CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred             EEEEECCCCceeecc-cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence            666676666654433 222221        567899999999999888 999999  555444

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.69  E-value=2.5e-14  Score=100.12  Aligned_cols=185  Identities=8%  Similarity=0.076  Sum_probs=126.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee----ecCceeeEEeC-CCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV----MSLRSNMVSWN-PMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~-~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      ...+++++++++++++...++.|.+||.. ++....+....    +...+..+++. +++..+++....++.|.+||...
T Consensus        31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g  109 (286)
T 1q7f_A           31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG  109 (286)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred             CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC
Confidence            57889999999988887888999999986 44444332211    12356789994 55554443222378899998432


Q ss_pred             CCC-cc-----------c-cccCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          78 LNS-PL-----------N-VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        78 ~~~-~~-----------~-~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                      ... .+           . ...+.++++...++.|.+||..  ++.+..+.  .+...+..++++|+|+++++...++.|
T Consensus       110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i  187 (286)
T 1q7f_A          110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV  187 (286)
T ss_dssp             CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred             cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence            110 01           0 1123456666678889999965  34444443  344568999999999988888889999


Q ss_pred             EEEEcCCCceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCC-eEEEEecC
Q psy8758         143 RLYLAHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEM-NLRVWKAH  191 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg-~v~~w~~~  191 (198)
                      ++||.. ++.+..+. .++...+..++++|+|+++++...++ .|.+|+..
T Consensus       188 ~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~  237 (286)
T 1q7f_A          188 KVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD  237 (286)
T ss_dssp             EEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred             EEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence            999974 44444442 12235789999999999888887776 99999964

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.69  E-value=2.8e-15  Score=108.61  Aligned_cols=162  Identities=16%  Similarity=0.115  Sum_probs=120.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCce--------eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK--------LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      +++.+++++...++++|+.+ .+.+|++.+.+.        ........... |..++|  ++..++++  .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~--~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS--TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE--ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE--cCCcEEEEE
Confidence            58899999999999999988 577798764330        11112223455 999999  88888775  779999999


Q ss_pred             ccCCCCcc------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          75 IRQLNSPL------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        75 ~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                      +++....-            ....+ .+++++.||.+.+||+.+ .....    +...|++++|||+|  ++.+..||.+
T Consensus       113 v~sl~~~~~~~~~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i  184 (388)
T 1xip_A          113 LEELSEFRTVTSFEKPVFQLKNVNN-TLVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF  184 (388)
T ss_dssp             SSSTTCEEEEEECSSCEEEEEECSS-EEEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred             chhhhccCccceeecceeeEEecCC-CEEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence            87654321            11111 388889999999999986 33332    45689999999999  7788999999


Q ss_pred             EEEEcCCCce--eeEEe-----c---cCcccEEEEEEcCCCCEEEE
Q psy8758         143 RLYLAHQGHS--RDIYH-----T---KRMQHVTHTVWSLDNKFVIS  178 (198)
Q Consensus       143 ~v~d~~~~~~--~~~~~-----~---~~~~~v~~~~~s~~~~~l~~  178 (198)
                      ++|+...++.  ...+.     .   +|...|.++.|.++++++++
T Consensus       185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            9998887775  33341     1   36788999999999998876

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.68  E-value=4.2e-14  Score=98.00  Aligned_cols=190  Identities=7%  Similarity=-0.009  Sum_probs=131.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++++++|+++++.. ++.|.+||...... ..+.. .....+..++++|++..++ +...++.|..|+..+.....
T Consensus        68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~-~~~~~p~~i~~~~~g~l~v-~~~~~~~i~~~~~~~~~~~~  143 (270)
T 1rwi_B           68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPF-DGLNYPEGLAVDTQGAVYV-ADRGNNRVVKLAAGSKTQTV  143 (270)
T ss_dssp             SCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCC-CSCSSEEEEEECTTCCEEE-EEGGGTEEEEECTTCCSCEE
T ss_pred             CcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeec-CCcCCCcceEECCCCCEEE-EECCCCEEEEEECCCceeEe
Confidence            467899999999666555 88999999865432 22211 1224578999999987544 44567889999765433211


Q ss_pred             ------------cc-ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          83 ------------NV-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        83 ------------~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                  .. ..+.++++...++.|..||... .............+..++++|+|.++++...++.|.+|+...
T Consensus       144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~  222 (270)
T 1rwi_B          144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS  222 (270)
T ss_dssp             CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred             eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence                        01 1233555556678899999875 222222222336688999999998878777788999999876


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccccC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH  198 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~~  198 (198)
                      ..... ....+...+.+++++|+|+++++...++.|+++++...+...|
T Consensus       223 ~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~~  270 (270)
T 1rwi_B          223 TTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHHH  270 (270)
T ss_dssp             SCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCCC
T ss_pred             Cccee-eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccccCC
Confidence            54332 2123335789999999999888888899999999998887765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.68  E-value=9.9e-15  Score=104.73  Aligned_cols=177  Identities=12%  Similarity=0.112  Sum_probs=112.9

Q ss_pred             ceeEEEECCCCceEEEeeCC---C--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC-----------
Q psy8758           3 HVTHTVWSLDNKFVISASDE---M--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE-----------   66 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----------   66 (198)
                      .+..++|||||++|+..+.+   +  .|.+|++.+++.. .+...  .. +..+.|+|+++.++++...           
T Consensus        60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~  135 (347)
T 2gop_A           60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-KILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED  135 (347)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEEEE--SE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred             cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-EEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence            46789999999999887653   3  3777788766532 33222  23 8899999999998887532           


Q ss_pred             ---------------CccEEEEeccCCCC--ccc--------cccCceEEEecCC------C-cEEEEEccCCCcceeee
Q psy8758          67 ---------------DFNLYSYDIRQLNS--PLN--------VHKDMTSAAANED------F-NLYSYDIRQLNSPLNVH  114 (198)
Q Consensus        67 ---------------d~~i~~~d~~~~~~--~~~--------~~~~~~~~~~~~~------~-~i~~~d~~~~~~~~~~~  114 (198)
                                     ...|++||+.+...  .+.        ..++.+++++..+      . ...+|.+.+ ++ ...+
T Consensus       136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l  213 (347)
T 2gop_A          136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWED-GK-EEKM  213 (347)
T ss_dssp             -CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEET-TE-EEEE
T ss_pred             ccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCeEEEEEecccccccccccccEEEeCC-Cc-eEEe
Confidence                           35688999875432  111        1122244545433      1 334444333 33 3333


Q ss_pred             cCCCcceEEEEEccCCCEEEEeecC--------CcEEEEEcCCCceeeEEeccCcccEEE-EEEcCCCCEEEEecCCCeE
Q psy8758         115 KDMTSAVTSVDYSPTGREFVAGGYD--------KSLRLYLAHQGHSRDIYHTKRMQHVTH-TVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       115 ~~~~~~i~~~~~sp~~~~l~~~~~d--------~~v~v~d~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~dg~v  185 (198)
                      ..+ ..+..+  +|+|+.|+..+.+        ..|.+||  +++.... ...+...+.. +.|+ |+ ++++++.++.+
T Consensus       214 ~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l-~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~  285 (347)
T 2gop_A          214 FEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI-LDEVDRGVGQAKIKD-GK-VYFTLFEEGSV  285 (347)
T ss_dssp             EEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES-STTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred             ccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec-cccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence            333 444444  9999988877644        3677888  5544333 2455667886 9999 88 88888999999


Q ss_pred             EEEecCCCc
Q psy8758         186 RVWKAHASE  194 (198)
Q Consensus       186 ~~w~~~~~~  194 (198)
                      ++| +.+++
T Consensus       286 ~l~-~~~g~  293 (347)
T 2gop_A          286 NLY-IWDGE  293 (347)
T ss_dssp             EEE-EESSS
T ss_pred             EEE-EcCCc
Confidence            999 87554

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.68  E-value=2.8e-14  Score=111.73  Aligned_cols=188  Identities=11%  Similarity=0.055  Sum_probs=124.0

Q ss_pred             ceeEEEECCCCceEEEeeCCC-----eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--------
Q psy8758           3 HVTHTVWSLDNKFVISASDEM-----NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--------   69 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--------   69 (198)
                      .+..++|||||++|+.+..++     .|++||+.+++.......   ...+..++|+||++.++.+. .++.        
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~---~~~~~~~~wspDg~~l~~~~-~~~~~~~~~~~~  201 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE---RVKFSCMAWTHDGKGMFYNA-YPQQDGKSDGTE  201 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE---EECSCCEEECTTSSEEEEEE-CCCCSSCCSSSC
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc---CcccceEEEEeCCCEEEEEE-ECCccccccccc
Confidence            367899999999998775433     899999998875442221   22367899999999998875 4433        


Q ss_pred             --------EEEEeccCCCCc--c--cc--c-----------cCceEEEecC-----CCcEEEEEccC------CCcceee
Q psy8758          70 --------LYSYDIRQLNSP--L--NV--H-----------KDMTSAAANE-----DFNLYSYDIRQ------LNSPLNV  113 (198)
Q Consensus        70 --------i~~~d~~~~~~~--~--~~--~-----------~~~~~~~~~~-----~~~i~~~d~~~------~~~~~~~  113 (198)
                              |++|++.+....  +  ..  +           .+..++....     +..|++||+.+      .......
T Consensus       202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~  281 (710)
T 2xdw_A          202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK  281 (710)
T ss_dssp             CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred             cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence                    999998765411  1  11  1           1122333322     56899999875      2224555


Q ss_pred             ecCCCcceEEEEEccCCCEEEEeecC----CcEEEEEcCCCce--eeEEeccCc-ccEEEEEEcCCCCEEEEecCCCe--
Q psy8758         114 HKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQGHS--RDIYHTKRM-QHVTHTVWSLDNKFVISASDEMN--  184 (198)
Q Consensus       114 ~~~~~~~i~~~~~sp~~~~l~~~~~d----~~v~v~d~~~~~~--~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~--  184 (198)
                      +..+...+.. .|+|+|+.|+..+..    ..|.+||+.++..  ...+...+. ..+..++|++++.++++...|+.  
T Consensus       282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~  360 (710)
T 2xdw_A          282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT  360 (710)
T ss_dssp             EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred             eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence            6556555554 588999977766543    3699999988642  223322322 36888999988888888888875  


Q ss_pred             EEEEecCCCcc
Q psy8758         185 LRVWKAHASEK  195 (198)
Q Consensus       185 v~~w~~~~~~~  195 (198)
                      |++|++.+|+.
T Consensus       361 l~~~~~~~g~~  371 (710)
T 2xdw_A          361 LQLHDLATGAL  371 (710)
T ss_dssp             EEEEETTTCCE
T ss_pred             EEEEECCCCCE
Confidence            56677756653

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.67  E-value=1.7e-13  Score=99.53  Aligned_cols=187  Identities=12%  Similarity=-0.033  Sum_probs=125.8

Q ss_pred             EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeee-e----ecCceeeEEeCCCCCeEEEEecC-Ccc
Q psy8758           6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKV-V----MSLRSNMVSWNPMEAFVFTAANE-DFN   69 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~~~~~~~~-d~~   69 (198)
                      .++++|||++++++.          .++.|.+||..+.+....+... .    .......+.|+|++++++++... ++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            789999999998885          3678999999877665554321 0    01234589999999999987533 578


Q ss_pred             EEEEeccCCCCccc-c----------ccCceEEEecCCCcEEEEEccCCCcce---------------------------
Q psy8758          70 LYSYDIRQLNSPLN-V----------HKDMTSAAANEDFNLYSYDIRQLNSPL---------------------------  111 (198)
Q Consensus        70 i~~~d~~~~~~~~~-~----------~~~~~~~~~~~~~~i~~~d~~~~~~~~---------------------------  111 (198)
                      |.++| .+.+.... .          .....+++...||.+..+|. + ++..                           
T Consensus       150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  226 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-A-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGR  226 (373)
T ss_pred             EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-C-CcEEEEEeccccccCCcceeecceeEecCCE
Confidence            99999 76543222 1          11123344556666666655 2 1111                           


Q ss_pred             -----------------------eeecC----------CCcceEEEEEccCCCEEEEeec----------CCcEEEEEcC
Q psy8758         112 -----------------------NVHKD----------MTSAVTSVDYSPTGREFVAGGY----------DKSLRLYLAH  148 (198)
Q Consensus       112 -----------------------~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------d~~v~v~d~~  148 (198)
                                             ..+..          .+.....++++|+++.+.+...          .+.|.++|+.
T Consensus       227 ~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~  306 (373)
T 2mad_H          227 IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL  306 (373)
T ss_pred             EEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence                                   00000          0111233778999887776543          3579999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~  197 (198)
                      +++.+..+..+  ....+++|+|||+ +++++. .++.|.++|+.+++.++
T Consensus       307 t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~  355 (373)
T 2mad_H          307 VGQTSSQISLG--HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ  355 (373)
T ss_pred             CCEEEEEEECC--CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence            99998887544  4688999999999 677766 58999999999988763

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.67  E-value=6.5e-14  Score=100.10  Aligned_cols=183  Identities=8%  Similarity=-0.006  Sum_probs=130.3

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--   81 (198)
                      ...+.+. +++.+++...++.|.++|..+++....+..   ......+++++++ .++++...++.|.++|..+....  
T Consensus        46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~---~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~  120 (328)
T 3dsm_A           46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG---FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGY  120 (328)
T ss_dssp             EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC---CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred             ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC---CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEE
Confidence            3456663 344555555678999999999887666632   3557889999988 56665447899999998764321  


Q ss_pred             cc---------------cccCceEEEec-CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC------
Q psy8758          82 LN---------------VHKDMTSAAAN-EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD------  139 (198)
Q Consensus        82 ~~---------------~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d------  139 (198)
                      +.               ...+.++++.. .++.|.++|+.+ .+.+..+... .....++++|+|++++++..+      
T Consensus       121 i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t-~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~  198 (328)
T 3dsm_A          121 IECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTET-DKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPY  198 (328)
T ss_dssp             EECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTT-TEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred             EEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCC-CeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCcc
Confidence            11               11123344443 488999999987 5666666542 345789999999987777654      


Q ss_pred             ----CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         140 ----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       140 ----~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                          +.|.++|..+++....+..........++|+|++++|+++..  .|.+||..+++.
T Consensus       199 ~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~  256 (328)
T 3dsm_A          199 GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV  256 (328)
T ss_dssp             CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred             ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence                789999999988776664332347899999999998887654  899999988775

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.67  E-value=1.6e-13  Score=104.46  Aligned_cols=185  Identities=9%  Similarity=0.033  Sum_probs=128.4

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEcc--CCceeeeeeeeeecCceeeEEeC----CCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWN----PMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .+..+.|+|||+++++++.|+.|.+||+.  +.+....+..   ......++|+    |++++++++...++.+.++|..
T Consensus       198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~---G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~  274 (567)
T 1qks_A          198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI---GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE  274 (567)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC---CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred             CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec---CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence            35689999999999999999999999995  6655544433   3446789999    6999999987778999999977


Q ss_pred             CCCCccc------------cc-------------cCceEEEecCCCcEEEEEccCCCcc-eeeecCCCcceEEEEEccCC
Q psy8758          77 QLNSPLN------------VH-------------KDMTSAAANEDFNLYSYDIRQLNSP-LNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        77 ~~~~~~~------------~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~sp~~  130 (198)
                      +.+....            .|             ....++....+|+|.++|....... +..+ ........+.|+|+|
T Consensus       275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdg  353 (567)
T 1qks_A          275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSH  353 (567)
T ss_dssp             TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTS
T ss_pred             CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCC
Confidence            6442110            01             1223445566788888988753211 1122 233456788999999


Q ss_pred             CEEEEee-cCCcEEEEEcCCCceeeEEec----cCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCC
Q psy8758         131 REFVAGG-YDKSLRLYLAHQGHSRDIYHT----KRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHA  192 (198)
Q Consensus       131 ~~l~~~~-~d~~v~v~d~~~~~~~~~~~~----~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~  192 (198)
                      +++++++ .++.|.++|+.+++....+..    .|.+.-..+ ++|++. .++++. .++.|.++|..+
T Consensus       354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~  421 (567)
T 1qks_A          354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP  421 (567)
T ss_dssp             CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence            9876655 578999999999988776644    232212122 588744 445543 568999999987

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.67  E-value=9.8e-14  Score=97.62  Aligned_cols=181  Identities=11%  Similarity=0.057  Sum_probs=122.5

Q ss_pred             ceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+++|+|+|+ +++++..++.|..|+..++  ...+..  ....+.+++++|+++.+++ ...++.|.+||..+....
T Consensus        29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~l~~~~dg~l~v~-~~~~~~i~~~d~~~g~~~  103 (296)
T 3e5z_A           29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH--PSHHQNGHCLNKQGHLIAC-SHGLRRLERQREPGGEWE  103 (296)
T ss_dssp             SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES--SCSSEEEEEECTTCCEEEE-ETTTTEEEEECSTTCCEE
T ss_pred             cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC--CCCCcceeeECCCCcEEEE-ecCCCeEEEEcCCCCcEE
Confidence            356899999998 7778888899999998766  344432  3456789999999986654 455688999998543311


Q ss_pred             -c---------------cc-ccCceEEE----ec-------------CCCcEEEEEccCCCcceeeecCCCcceEEEEEc
Q psy8758          82 -L---------------NV-HKDMTSAA----AN-------------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        82 -~---------------~~-~~~~~~~~----~~-------------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~s  127 (198)
                       +               .. ..+.++++    ++             ..+.|..++..   ..+..+..+......++|+
T Consensus       104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~~~~~~~~~~~gi~~s  180 (296)
T 3e5z_A          104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLSAPIRDRVKPNGLAFL  180 (296)
T ss_dssp             EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEEEEECCCSSEEEEEEC
T ss_pred             EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---CCEEEeecCCCCCccEEEC
Confidence             1               00 11223343    22             12344444443   2233444455667899999


Q ss_pred             cCCCEEEEeecCCcEEEEEcC-CCce---eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         128 PTGREFVAGGYDKSLRLYLAH-QGHS---RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~-~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |+++.+++.+.++.|.+|++. .++.   ...+ ..+...+..++++++|+++++.  ++.|.+|+.+ ++.
T Consensus       181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~  248 (296)
T 3e5z_A          181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE  248 (296)
T ss_dssp             TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred             CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence            999988777778999999997 4544   2333 3344567789999999977666  7889999986 444

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.65  E-value=1.8e-13  Score=107.27  Aligned_cols=190  Identities=12%  Similarity=0.017  Sum_probs=127.9

Q ss_pred             eeEEEECCCCceEEEeeCCCe----------------EEEEEccCCceeeee--eeeeecCceeeEEeCCCCCeEEEEec
Q psy8758           4 VTHTVWSLDNKFVISASDEMN----------------LRVWKAHASEKLGPI--RKVVMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~----------------i~i~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      +..++|+|||+.|+.++.++.                |++|++.+++....+  ....+...+..+.|+|++++++.+..
T Consensus       173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~  252 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR  252 (710)
T ss_dssp             SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred             cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence            467999999999998887765                999999876532122  11112344678999999999988653


Q ss_pred             C----CccEEEEeccC------C---CCccccc----------c-CceEEEecC---CCcEEEEEccCCCc-ceeeecCC
Q psy8758          66 E----DFNLYSYDIRQ------L---NSPLNVH----------K-DMTSAAANE---DFNLYSYDIRQLNS-PLNVHKDM  117 (198)
Q Consensus        66 ~----d~~i~~~d~~~------~---~~~~~~~----------~-~~~~~~~~~---~~~i~~~d~~~~~~-~~~~~~~~  117 (198)
                      .    +..+++||+..      .   ...+..+          . ..+++....   .+.|.+||+.+... ....+..+
T Consensus       253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~  332 (710)
T 2xdw_A          253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE  332 (710)
T ss_dssp             CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred             ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence            2    56899999875      3   1122211          1 123333332   34699999886321 23444444


Q ss_pred             Cc--ceEEEEEccCCCEEEEeecCCc--EEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe----cCCCeEEEEe
Q psy8758         118 TS--AVTSVDYSPTGREFVAGGYDKS--LRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA----SDEMNLRVWK  189 (198)
Q Consensus       118 ~~--~i~~~~~sp~~~~l~~~~~d~~--v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~v~~w~  189 (198)
                      ..  .+..++|++++.++++...++.  |.+|++.+++....+ ..+...+..+.++|+++.++..    ...+.++.||
T Consensus       333 ~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d  411 (710)
T 2xdw_A          333 HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF-PLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD  411 (710)
T ss_dssp             CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE-CCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred             CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec-CCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence            33  6888999987788888888874  666777677765555 3446788999999998765532    2457899999


Q ss_pred             cCCCc
Q psy8758         190 AHASE  194 (198)
Q Consensus       190 ~~~~~  194 (198)
                      +.+++
T Consensus       412 ~~tg~  416 (710)
T 2xdw_A          412 LTKEE  416 (710)
T ss_dssp             TTSSS
T ss_pred             CCCCc
Confidence            98876

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.65  E-value=2.5e-14  Score=104.11  Aligned_cols=187  Identities=13%  Similarity=0.032  Sum_probs=116.5

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeE--EeCCCCCeEEEEe------------------
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMV--SWNPMEAFVFTAA------------------   64 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~------------------   64 (198)
                      ..++|+|||+.|+.++.++.+++||+.+++.......  +...+...  .++|+++.++...                  
T Consensus        84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~  161 (388)
T 3pe7_A           84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV--PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF  161 (388)
T ss_dssp             SSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred             cceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec--hhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence            3678999999999999999999999998875433322  22223223  3489998886431                  


Q ss_pred             ---cCCccEEEEeccCCCCc-c----------cccc--CceEEEecC------CCcEEEEEccCCCcceeeecCCC--cc
Q psy8758          65 ---NEDFNLYSYDIRQLNSP-L----------NVHK--DMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMT--SA  120 (198)
Q Consensus        65 ---~~d~~i~~~d~~~~~~~-~----------~~~~--~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~--~~  120 (198)
                         ..+..|++||+.+.... +          ...+  +..++....      ...|+++|+..  .....+..+.  ..
T Consensus       162 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~  239 (388)
T 3pe7_A          162 YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGES  239 (388)
T ss_dssp             GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEE
T ss_pred             hccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcc
Confidence               23467999998765321 1          1112  233333333      33678888764  3334444444  35


Q ss_pred             eEEEEEccCCCEEEEeec-CC----cEEEEEcCCCceeeEEe-ccCccc---EEEEEEcCCCCEEEEe---------cCC
Q psy8758         121 VTSVDYSPTGREFVAGGY-DK----SLRLYLAHQGHSRDIYH-TKRMQH---VTHTVWSLDNKFVISA---------SDE  182 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~-d~----~v~v~d~~~~~~~~~~~-~~~~~~---v~~~~~s~~~~~l~~~---------~~d  182 (198)
                      +..++|+|||+.|+..+. ++    .|++||+.+++...... .++...   ...+.|+|||+.|+..         ..+
T Consensus       240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~  319 (388)
T 3pe7_A          240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND  319 (388)
T ss_dssp             EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred             cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence            778999999997766443 22    39999999987644321 111000   1123799999987753         446


Q ss_pred             CeEEEEecCCCcc
Q psy8758         183 MNLRVWKAHASEK  195 (198)
Q Consensus       183 g~v~~w~~~~~~~  195 (198)
                      ..|++||+.+++.
T Consensus       320 ~~i~~~d~~~~~~  332 (388)
T 3pe7_A          320 PFLYVFNMKNGTQ  332 (388)
T ss_dssp             CEEEEEETTTTEE
T ss_pred             CEEEEEeccCCce
Confidence            7899999988764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.65  E-value=7.6e-15  Score=106.94  Aligned_cols=182  Identities=14%  Similarity=0.123  Sum_probs=116.7

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceee-------------------EEeCCCCCeEEEEe--
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNM-------------------VSWNPMEAFVFTAA--   64 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~~~--   64 (198)
                      .+.|+|||++|+..+.++.|++|++.+++........  ......                   +.|+|+++.++...  
T Consensus        85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~  162 (396)
T 3c5m_A           85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD--EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY  162 (396)
T ss_dssp             TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred             cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc--cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence            3789999999999999989999999877643222211  111111                   45788887765432  


Q ss_pred             --cCCccEEEEeccCCCCc-----------ccccc--CceEEEecCC------CcEEEEEccCCCcceeeecCC--Ccce
Q psy8758          65 --NEDFNLYSYDIRQLNSP-----------LNVHK--DMTSAAANED------FNLYSYDIRQLNSPLNVHKDM--TSAV  121 (198)
Q Consensus        65 --~~d~~i~~~d~~~~~~~-----------~~~~~--~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~~~--~~~i  121 (198)
                        ..+..|++||+.+....           ....+  +..++..+.+      ..|++||+.. .. ...+..+  ...+
T Consensus       163 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~  240 (396)
T 3c5m_A          163 HTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESC  240 (396)
T ss_dssp             HTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEE
T ss_pred             cCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccc
Confidence              35678999998754321           01111  2223333222      4688888865 22 3333332  2357


Q ss_pred             EEEEEccCCCEEEEeecC-----CcEEEEEcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEec---------------
Q psy8758         122 TSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISAS---------------  180 (198)
Q Consensus       122 ~~~~~sp~~~~l~~~~~d-----~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~---------------  180 (198)
                      ..++|+|+|+.|+..+.+     +.|++||+.+++........   ... +.|+| ||+++++++               
T Consensus       241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~  316 (396)
T 3c5m_A          241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI  316 (396)
T ss_dssp             EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred             cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence            889999999988776543     44999999988765543211   233 89999 999888654               


Q ss_pred             -CCCeEEEEecCCCcc
Q psy8758         181 -DEMNLRVWKAHASEK  195 (198)
Q Consensus       181 -~dg~v~~w~~~~~~~  195 (198)
                       .++.|++||+.+++.
T Consensus       317 ~~~~~i~~~d~~~~~~  332 (396)
T 3c5m_A          317 ENDPFLYVLNTKAKSA  332 (396)
T ss_dssp             CCCCEEEEEETTTTBC
T ss_pred             CCCCcEEEEecccCce
Confidence             347899999987764

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.64  E-value=2.3e-13  Score=97.22  Aligned_cols=188  Identities=9%  Similarity=-0.008  Sum_probs=125.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee---cCceeeEEeCCCCCeEEEEec-CCccEEEEeccCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM---SLRSNMVSWNPMEAFVFTAAN-EDFNLYSYDIRQL   78 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~-~d~~i~~~d~~~~   78 (198)
                      ....++++++++.+++...++.|.+||..+++....+.....   ......+++  ++..++++.. .++.|.++|..+.
T Consensus        85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~  162 (328)
T 3dsm_A           85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD  162 (328)
T ss_dssp             SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT
T ss_pred             CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC
Confidence            457889989985444444789999999988875554443110   014567777  4566666654 4889999998754


Q ss_pred             CCc-----------ccc-ccCceEEEecCC----------CcEEEEEccCCCcceeeecCC-CcceEEEEEccCCCEEEE
Q psy8758          79 NSP-----------LNV-HKDMTSAAANED----------FNLYSYDIRQLNSPLNVHKDM-TSAVTSVDYSPTGREFVA  135 (198)
Q Consensus        79 ~~~-----------~~~-~~~~~~~~~~~~----------~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~  135 (198)
                      ...           +.. ..+.+++++..+          +.|.++|..+ .+....+... ......++++|+++.|.+
T Consensus       163 ~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv  241 (328)
T 3dsm_A          163 KVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYW  241 (328)
T ss_dssp             EEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred             eEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence            321           111 123345555443          7899999987 4555555422 236789999999998887


Q ss_pred             eecCCcEEEEEcCCCceeeE-EeccCcccEEEEEEcC-CCCEEEEe----cCCCeEEEEecCCCccc
Q psy8758         136 GGYDKSLRLYLAHQGHSRDI-YHTKRMQHVTHTVWSL-DNKFVISA----SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       136 ~~~d~~v~v~d~~~~~~~~~-~~~~~~~~v~~~~~s~-~~~~l~~~----~~dg~v~~w~~~~~~~~  196 (198)
                      +..  .|.+||..+++.... +..........++++| +++++++.    ..++.|.+||.+ ++.+
T Consensus       242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~  305 (328)
T 3dsm_A          242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI  305 (328)
T ss_dssp             ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred             Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence            765  899999988775321 1121235788999999 55666665    578999999998 7754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.63  E-value=9.3e-14  Score=96.94  Aligned_cols=175  Identities=7%  Similarity=0.026  Sum_probs=126.3

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc--------
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN--------   83 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~--------   83 (198)
                      .+++|++++.++.|++||.++++.+..+.... ...+.++.+.|+++.++ +  .++.+..||. +.+....        
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~W~~~~~~~~~   78 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILF-S--YSKGAKMITR-DGRELWNIAAPAGCE   78 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence            46889999999999999998998766665421 13578899999998777 3  3566777776 3322111        


Q ss_pred             ------cccCceEEEecC-CCcEEEEEccCCCcceeeec------CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          84 ------VHKDMTSAAANE-DFNLYSYDIRQLNSPLNVHK------DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        84 ------~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                            ...+.++++... ++.+..+|..  ++.+..+.      .+......+++.++|+++++...++.|..||.. +
T Consensus        79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G  155 (276)
T 3no2_A           79 MQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G  155 (276)
T ss_dssp             EEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             ccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence                  112344555555 6667777653  55555543      122345567889999999999999999999998 8


Q ss_pred             ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+..+...  ..+.++...++|+++++++.++.|..+|.++|+.+
T Consensus       156 ~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~  199 (276)
T 3no2_A          156 QLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV  199 (276)
T ss_dssp             CEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred             CEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence            888877432  45566788999999998888889999999988875

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.62  E-value=1.4e-12  Score=93.07  Aligned_cols=183  Identities=8%  Similarity=-0.007  Sum_probs=119.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC----ccEEEEeccCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED----FNLYSYDIRQL   78 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~   78 (198)
                      .+.+++|+|+|++++++..++.|.+||..+++......  .....+.+++++|+++.+++. ..+    +.|.+||....
T Consensus        46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~-~~~~~~~~~i~~~d~~~~  122 (333)
T 2dg1_A           46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV--SHKANPAAIKIHKDGRLFVCY-LGDFKSTGGIFAATENGD  122 (333)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE--CSSSSEEEEEECTTSCEEEEE-CTTSSSCCEEEEECTTSC
T ss_pred             cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee--CCCCCcceEEECCCCcEEEEe-CCCCCCCceEEEEeCCCC
Confidence            35789999999988788888999999998776432221  234668999999999866654 344    58999997654


Q ss_pred             CCc--cc--cc-----------cCceEEEecC------CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-Ee
Q psy8758          79 NSP--LN--VH-----------KDMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AG  136 (198)
Q Consensus        79 ~~~--~~--~~-----------~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~  136 (198)
                      ...  +.  ..           .+.++++...      .+.|..+|...  ..+..+......+..++|+|+++.|+ +.
T Consensus       123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~  200 (333)
T 2dg1_A          123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVLWVTE  200 (333)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred             EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC--CEEEEeecCCCcccceEECCCCCEEEEEe
Confidence            322  11  00           1123333322      24455555543  22333322334578899999998654 44


Q ss_pred             ecCCcEEEEEcCC-CceeeE-----E--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         137 GYDKSLRLYLAHQ-GHSRDI-----Y--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       137 ~~d~~v~v~d~~~-~~~~~~-----~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ..++.|.+||+.+ +.....     .  ..++ ..+..++++++|+++++...++.|.+||.+
T Consensus       201 ~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~  262 (333)
T 2dg1_A          201 TTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR  262 (333)
T ss_dssp             GGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             CCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence            5678999999964 332211     1  0112 467889999999988877778999999984

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.61  E-value=9.6e-13  Score=92.55  Aligned_cols=189  Identities=6%  Similarity=-0.012  Sum_probs=124.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEE---ec------------
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTA---AN------------   65 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~---~~------------   65 (198)
                      .+.+++++|+|+++++...++.|.+||..+++.........  ....+..++++|+++.+++.   |.            
T Consensus        70 ~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~  149 (296)
T 3e5z_A           70 HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEME  149 (296)
T ss_dssp             SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCC
T ss_pred             CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccccc
Confidence            47889999999988777677899999997776432222111  12346789999999877642   11            


Q ss_pred             -CCccEEEEeccCCCCccc----------c-ccCceEEEecCCCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCC
Q psy8758          66 -EDFNLYSYDIRQLNSPLN----------V-HKDMTSAAANEDFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        66 -~d~~i~~~d~~~~~~~~~----------~-~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~  130 (198)
                       ..+.|+.++.......+.          . ..+..+++.+.++.|++|++...+..   ...+..+...+..++++++|
T Consensus       150 ~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G  229 (296)
T 3e5z_A          150 LPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG  229 (296)
T ss_dssp             SSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS
T ss_pred             CCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC
Confidence             134566666542111111          1 12234477777889999998732333   22333344556789999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEE-cCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW-SLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +++++.  ++.|.+||.. ++.+..+. .+.. +.+++| +|+++.|+.++.+ .+.-++.++++.-.
T Consensus       230 ~l~v~~--~~~v~~~~~~-g~~~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~  291 (296)
T 3e5z_A          230 LIWASA--GDGVHVLTPD-GDELGRVL-TPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEH  291 (296)
T ss_dssp             CEEEEE--TTEEEEECTT-SCEEEEEE-CSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred             CEEEEc--CCeEEEECCC-CCEEEEEE-CCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccc
Confidence            977666  7889999986 66655553 3434 889999 6899888877765 56667777766543

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.60  E-value=7.2e-14  Score=109.20  Aligned_cols=170  Identities=11%  Similarity=0.027  Sum_probs=105.1

Q ss_pred             ceeEEEECCCCceEE-----EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVI-----SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~-----~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .+..++|||||++||     .|+.+..|++||+.+++.... ... .......++|+||++.++.+. .+..      ..
T Consensus       122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~-~~~~~~~~~wspDg~~l~~~~-~d~~------~~  192 (695)
T 2bkl_A          122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVI-EGGKYATPKWTPDSKGFYYEW-LPTD------PS  192 (695)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCB-SCCTTCCCEECTTSSEEEEEE-CCCC------TT
T ss_pred             EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-ccc-CcccccceEEecCCCEEEEEE-ecCC------CC
Confidence            478899999999998     445567899999998874311 111 111226899999999998864 4332      00


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCc---ceeeecCCCcceEEEEEccCCCEEEEeecCC----cEEEEEcCCC
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGYDK----SLRLYLAHQG  150 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~----~v~v~d~~~~  150 (198)
                      .  ...        .......|++|++.+...   .+.....+...+..+.|||||++|+..+.++    .|++++..++
T Consensus       193 ~--~~~--------~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~  262 (695)
T 2bkl_A          193 I--KVD--------ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK  262 (695)
T ss_dssp             S--CGG--------GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS
T ss_pred             C--ccc--------cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC
Confidence            0  000        001123456666554221   2222233456788999999999998877665    6777776665


Q ss_pred             ceeeEEeccCcccEEEEEEcCCCCEEEEec---CCCeEEEEecCCCc
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNKFVISAS---DEMNLRVWKAHASE  194 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~v~~w~~~~~~  194 (198)
                      +.....  .+...+....| ++|++++...   .++.|.+||+.+++
T Consensus       263 ~~~~l~--~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~  306 (695)
T 2bkl_A          263 DFRLLV--KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA  306 (695)
T ss_dssp             SCEEEE--ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred             ceEEee--cCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence            544433  33345556666 5666444443   35889999998764

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.60  E-value=5.8e-13  Score=96.42  Aligned_cols=74  Identities=5%  Similarity=-0.015  Sum_probs=62.6

Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCCC
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLDN  173 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~  173 (198)
                      +..|.+||+.+ .+.+..+..+.  +..++|+|||++|++++. +.|.+||..++  +.+..+ .........++++|+|
T Consensus       285 ~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i-~~~G~~P~~~~~~p~G  359 (361)
T 2oiz_A          285 AAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI-EGAAEASLQVQFHPVG  359 (361)
T ss_dssp             CSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE-TTSCSSEEEEEECCCS
T ss_pred             CceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe-ccCCCCcEEEEecCCC
Confidence            34799999998 67888887766  899999999999998887 99999999999  777765 3455778899999998


Q ss_pred             C
Q psy8758         174 K  174 (198)
Q Consensus       174 ~  174 (198)
                      +
T Consensus       360 ~  360 (361)
T 2oiz_A          360 G  360 (361)
T ss_dssp             C
T ss_pred             C
Confidence            6

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.59  E-value=1.5e-12  Score=90.20  Aligned_cols=186  Identities=4%  Similarity=-0.065  Sum_probs=122.3

Q ss_pred             ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+++++++|++++ +...++.|.+|+..+... ..+. ......+.++++++++..+ ++.. ++.|..||.......
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~-~~~~~~p~~i~~~~~g~l~-v~~~-~~~i~~~d~~~~~~~  100 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLP-FNGLYQPQGLAVDGAGTVY-VTDF-NNRVVTLAAGSNNQT  100 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC------EECC-CCSCCSCCCEEECTTCCEE-EEET-TTEEEEECTTCSCCE
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCccc-ceEe-eCCcCCcceeEECCCCCEE-EEcC-CCEEEEEeCCCceEe
Confidence            567899999999776 446788999998755432 1111 1122456889999998844 4444 788999997654321


Q ss_pred             cc-------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 LN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 ~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..             ...+.++++...++.|..|+..+ .............+..++++|+|+++++...++.|.+||..
T Consensus       101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~  179 (270)
T 1rwi_B          101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS-KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE  179 (270)
T ss_dssp             ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC-CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred             eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC-ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence            10             01223455555667788887554 22222122233457889999999977777778899999988


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ........ ..+...+..++++++|.++++...++.|.+|+..+..
T Consensus       180 ~~~~~~~~-~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~  224 (270)
T 1rwi_B          180 SNNQVVLP-FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT  224 (270)
T ss_dssp             TCCEEECC-CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred             CCceEeec-ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence            76554332 2333578899999999888777778899999987643

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.58  E-value=8.1e-13  Score=94.74  Aligned_cols=171  Identities=12%  Similarity=0.183  Sum_probs=111.0

Q ss_pred             eeEEEECCCCceEEEeeCC---------------------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCC
Q psy8758           4 VTHTVWSLDNKFVISASDE---------------------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM   56 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d---------------------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~   56 (198)
                      +..++|+|+|+.|+.++.+                           ..|.+||+.+++....+..   . .+..+.|+|+
T Consensus       106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~spd  181 (347)
T 2gop_A          106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHRD  181 (347)
T ss_dssp             EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEETT
T ss_pred             ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCCC
Confidence            6789999999988887632                           5788999987764344433   2 6789999999


Q ss_pred             CCeEEEEecCC---------ccEEEEeccCCCCccc--------cccCceEEEecC--------CCcEEEEEccCCCcce
Q psy8758          57 EAFVFTAANED---------FNLYSYDIRQLNSPLN--------VHKDMTSAAANE--------DFNLYSYDIRQLNSPL  111 (198)
Q Consensus        57 ~~~~~~~~~~d---------~~i~~~d~~~~~~~~~--------~~~~~~~~~~~~--------~~~i~~~d~~~~~~~~  111 (198)
                      + .++++ ..+         ..|+++| ......+.        ...+..++..+.        ...|++||  + ++..
T Consensus       182 g-~~~~~-~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~  255 (347)
T 2gop_A          182 K-IVVNV-PHREIIPQYFKFWDIYIWE-DGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVM  255 (347)
T ss_dssp             E-EEEEE-ECCCSSCCSSCCEEEEEEE-TTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEE
T ss_pred             e-EEEEE-ecccccccccccccEEEeC-CCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--C-CceE
Confidence            9 55554 333         2455555 21111111        112233433332        24677888  3 4444


Q ss_pred             eeecCCCcceEE-EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE-EEEe
Q psy8758         112 NVHKDMTSAVTS-VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL-RVWK  189 (198)
Q Consensus       112 ~~~~~~~~~i~~-~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v-~~w~  189 (198)
                      .....+...+.. +.|+ ++ ++++++.++.+++| +.+++.....  .+...|.+++|+|  .++++++.++.. .+|.
T Consensus       256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~--~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~  328 (347)
T 2gop_A          256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA--KGRHWIMGFDVDE--IVVYLKETATRLRELFT  328 (347)
T ss_dssp             ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE--CSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred             eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe--cCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence            444455677886 9999 88 88899999999999 8866554433  3467899999999  666666666554 6666


Q ss_pred             cC
Q psy8758         190 AH  191 (198)
Q Consensus       190 ~~  191 (198)
                      ++
T Consensus       329 ~~  330 (347)
T 2gop_A          329 WD  330 (347)
T ss_dssp             ES
T ss_pred             eC
Confidence            54

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.58  E-value=5.1e-13  Score=98.05  Aligned_cols=189  Identities=14%  Similarity=0.075  Sum_probs=127.3

Q ss_pred             EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeee--e---ecCceeeEEeCCCCCeEEEEecC-Ccc
Q psy8758           6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKV--V---MSLRSNMVSWNPMEAFVFTAANE-DFN   69 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~~~~~~~~~~-d~~   69 (198)
                      .++++|||++++++.          .++.|.++|..+.+....+...  .   .......+.|+|++++++++... ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            789999999888875          3678999999988876665431  0   01235689999999999987533 678


Q ss_pred             EEEEeccCCCCc--ccc--------ccCceEEEecCCCcEEEEEccCCCcce----------------------------
Q psy8758          70 LYSYDIRQLNSP--LNV--------HKDMTSAAANEDFNLYSYDIRQLNSPL----------------------------  111 (198)
Q Consensus        70 i~~~d~~~~~~~--~~~--------~~~~~~~~~~~~~~i~~~d~~~~~~~~----------------------------  111 (198)
                      |.+.|+.+.+..  +..        .....+++.+.||++.+.+... ++..                            
T Consensus       202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~  280 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLV  280 (426)
T ss_dssp             EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEE
T ss_pred             EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEE
Confidence            999999875422  111        1123334445555555555421 1111                            


Q ss_pred             ---------------------eeecC----------CCcceEEEEEccCCCEEEEeec----------CCcEEEEEcCCC
Q psy8758         112 ---------------------NVHKD----------MTSAVTSVDYSPTGREFVAGGY----------DKSLRLYLAHQG  150 (198)
Q Consensus       112 ---------------------~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------d~~v~v~d~~~~  150 (198)
                                           ..+..          .......++++|+++.+++...          ++.|.++|+.+.
T Consensus       281 ~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~  360 (426)
T 3c75_H          281 WPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG  360 (426)
T ss_dssp             EEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred             EEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC
Confidence                                 00000          0011123788999887666542          357999999999


Q ss_pred             ceeeEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758         151 HSRDIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       151 ~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~  197 (198)
                      +.+..+..+  ....++.|+|||+ ++++.. .++.|.++|+.+++.++
T Consensus       361 kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~  407 (426)
T 3c75_H          361 ERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR  407 (426)
T ss_dssp             CEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             eEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence            998887544  3688999999999 787776 58999999999998753

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.58  E-value=1.9e-13  Score=106.91  Aligned_cols=190  Identities=9%  Similarity=0.002  Sum_probs=123.6

Q ss_pred             eEEEECCCCceEEEeeCCCe-------------EEEEEccCCceee-ee-eeeeecCceeeEEeCCCCCeEEEEecCC--
Q psy8758           5 THTVWSLDNKFVISASDEMN-------------LRVWKAHASEKLG-PI-RKVVMSLRSNMVSWNPMEAFVFTAANED--   67 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~-------------i~i~~~~~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d--   67 (198)
                      ..++|+|||+.|+.++.|..             |++|++.++.... .+ ....+...+..+.|+|++++++++...+  
T Consensus       171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~  250 (695)
T 2bkl_A          171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS  250 (695)
T ss_dssp             CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred             cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence            57899999999999887765             9999998775321 22 2212334678999999999998765333  


Q ss_pred             -ccEEEEeccCCC-Ccccc----------ccCceEEEec---CCCcEEEEEccCCCc--ceeeecCC-CcceEEEEEccC
Q psy8758          68 -FNLYSYDIRQLN-SPLNV----------HKDMTSAAAN---EDFNLYSYDIRQLNS--PLNVHKDM-TSAVTSVDYSPT  129 (198)
Q Consensus        68 -~~i~~~d~~~~~-~~~~~----------~~~~~~~~~~---~~~~i~~~d~~~~~~--~~~~~~~~-~~~i~~~~~sp~  129 (198)
                       ..|++++..... ..+..          +.+.+++...   .++.|..||+.+...  ....+..+ ...+..++|+ +
T Consensus       251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~  329 (695)
T 2bkl_A          251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G  329 (695)
T ss_dssp             EEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred             ceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C
Confidence             267777654322 11111          2223334433   357899999976321  12333333 4457888888 6


Q ss_pred             CCEEEEeecCCcEEEEEcC-CCceeeEEeccCcccEEEEEEcCCCCEEEEe----cCCCeEEEEecCCCcc
Q psy8758         130 GREFVAGGYDKSLRLYLAH-QGHSRDIYHTKRMQHVTHTVWSLDNKFVISA----SDEMNLRVWKAHASEK  195 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~v~~w~~~~~~~  195 (198)
                      +.++++...|+..++|.+. .+.....+.......+..++++|+++.++..    ...+.|++||+.+++.
T Consensus       330 ~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          330 GHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             TEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             CEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence            7788888889988888665 3444443322335678888999999876632    3457899999988763

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.57  E-value=3e-12  Score=97.60  Aligned_cols=180  Identities=12%  Similarity=0.099  Sum_probs=127.1

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc--CCCCc--------
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR--QLNSP--------   81 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~--------   81 (198)
                      .+.++++...++.|.++|..+++....+..   ...+..+.|+|++++++++ +.++.|.+||+.  +....        
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~---g~~p~~v~~SpDGr~lyv~-~~dg~V~viD~~~~t~~~v~~i~~G~~  241 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIKIGSE  241 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEEEEEeC---CCCccceEECCCCCEEEEE-cCCCeEEEEECCCCCCcEeEEEecCCC
Confidence            344666667889999999998887666543   3456789999999999876 589999999995  33211        


Q ss_pred             ---cccc-----cC-ceEEEecCCCcEEEEEccCCCcceeeecCC-----------CcceEEEEEccCCCEE-EEeecCC
Q psy8758          82 ---LNVH-----KD-MTSAAANEDFNLYSYDIRQLNSPLNVHKDM-----------TSAVTSVDYSPTGREF-VAGGYDK  140 (198)
Q Consensus        82 ---~~~~-----~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~i~~~~~sp~~~~l-~~~~~d~  140 (198)
                         +..+     .+ .++++...++++.++|..+ .+++..+...           ...+..+..++++..+ +....+|
T Consensus       242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t-~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CceeEEccccCCCCCEEEEEEccCCeEEEEECCC-CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence               1112     23 3455556678999999887 5666655421           1257788889987654 4455679


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~~  196 (198)
                      .|.++|....+...............+.|+|+|++++++ ..++.|.++|+.+++.+
T Consensus       321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~  377 (567)
T 1qks_A          321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV  377 (567)
T ss_dssp             EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence            999999987654333322333567788999999987655 46789999999998764

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.56  E-value=1.2e-11  Score=86.62  Aligned_cols=185  Identities=5%  Similarity=-0.074  Sum_probs=126.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++++++|+.+++...++.|.+||.. ++ ...+........+..+++++++...++ ...++.|..||.......+
T Consensus        16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~~~~g~~~~~   92 (299)
T 2z2n_A           16 GPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFT-ENAANKIGRITKKGIIKEY   92 (299)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred             CccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEe-CCCCCeEEEECCCCcEEEE
Confidence            57899999999977776667899999987 44 222221112456789999999886655 3457788888865221111


Q ss_pred             c------------c-ccCceEEEecCCCcEEEEEccCCCccee-eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          83 N------------V-HKDMTSAAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        83 ~------------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      .            . ..+.+.++...++.|..||. + +.... ........+..++++|+|+.+++...++.|..||. 
T Consensus        93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-  169 (299)
T 2z2n_A           93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D-GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-  169 (299)
T ss_dssp             ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred             eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C-CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence            1            0 12234555556778888887 3 23222 22234456899999999988887777889999999 


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +++............+..++++++|+++++...++.|.+||. +++
T Consensus       170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~  214 (299)
T 2z2n_A          170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE  214 (299)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred             CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence            666544322333456889999999998777767889999998 654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.55  E-value=8e-12  Score=89.15  Aligned_cols=177  Identities=10%  Similarity=0.054  Sum_probs=113.9

Q ss_pred             ceeEEEECCCCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC------CccEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE------DFNLYS   72 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------d~~i~~   72 (198)
                      .+.+++++|+|+++++...+    +.|.+||..++.....+........+..++++|++..+++. ..      .+.|+.
T Consensus        88 ~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~-~~~~~~~~~~~l~~  166 (333)
T 2dg1_A           88 NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD-FRGYSTNPLGGVYY  166 (333)
T ss_dssp             SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEE-CCCBTTBCCEEEEE
T ss_pred             CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEe-ccccccCCCceEEE
Confidence            57899999999987776665    68999998776543222211233467899999999876654 22      356777


Q ss_pred             EeccCCCC-cc----------ccc-cC-ceEEEecCCCcEEEEEccCCCcceee--------ecCCCcceEEEEEccCCC
Q psy8758          73 YDIRQLNS-PL----------NVH-KD-MTSAAANEDFNLYSYDIRQLNSPLNV--------HKDMTSAVTSVDYSPTGR  131 (198)
Q Consensus        73 ~d~~~~~~-~~----------~~~-~~-~~~~~~~~~~~i~~~d~~~~~~~~~~--------~~~~~~~i~~~~~sp~~~  131 (198)
                      +|...... .+          ... .+ .++++...++.|.+||+...+..+..        +..+ ..+..++++++|+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~  245 (333)
T 2dg1_A          167 VSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN  245 (333)
T ss_dssp             ECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC
T ss_pred             EeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC
Confidence            76553221 11          011 12 24455566789999998642332221        1111 3578899999999


Q ss_pred             EEEEeecCCcEEEEEcCCCceeeEEeccC-----cccEEEEEEcCCCCEEEEecCC
Q psy8758         132 EFVAGGYDKSLRLYLAHQGHSRDIYHTKR-----MQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       132 ~l~~~~~d~~v~v~d~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      ++++...++.|.+||.. ++....+....     ...+.+++|+||++.|+.++.+
T Consensus       246 l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          246 LYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             EEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             EEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            88888778999999984 55555442221     1268899999998766654443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.53  E-value=2.6e-12  Score=92.81  Aligned_cols=189  Identities=9%  Similarity=-0.044  Sum_probs=122.3

Q ss_pred             EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEecC-Ccc
Q psy8758           6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAANE-DFN   69 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~-d~~   69 (198)
                      .+.++||+++++++.          .++.|.+||+.+++....+....     .......+.++||+++++++... +..
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~  148 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence            689999999988886          36789999999998777765320     01235689999999999987433 456


Q ss_pred             EEE--EeccCCCCcc--------ccccCceEEEecCCCcEEEEEccC----CCc--------------------------
Q psy8758          70 LYS--YDIRQLNSPL--------NVHKDMTSAAANEDFNLYSYDIRQ----LNS--------------------------  109 (198)
Q Consensus        70 i~~--~d~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~d~~~----~~~--------------------------  109 (198)
                      +.+  +|..+ ...+        .......+++.+.|+++...|+..    .++                          
T Consensus       149 v~V~~iD~~t-v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~  227 (368)
T 1mda_H          149 AGLSVPGASD-DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVW  227 (368)
T ss_dssp             EEEEETTTEE-EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred             EEEEEEchhh-ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEE
Confidence            888  88854 1111        111112333444455544444432    000                          


Q ss_pred             -----------------ceeeecC----------CCcceEEEEEccCCCEEEEeec---------CCcEEEEEcCCCcee
Q psy8758         110 -----------------PLNVHKD----------MTSAVTSVDYSPTGREFVAGGY---------DKSLRLYLAHQGHSR  153 (198)
Q Consensus       110 -----------------~~~~~~~----------~~~~i~~~~~sp~~~~l~~~~~---------d~~v~v~d~~~~~~~  153 (198)
                                       .+..+.-          .+.....++++|+++.+..+..         ++.+.++|+.+.+.+
T Consensus       228 vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv  307 (368)
T 1mda_H          228 AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS  307 (368)
T ss_dssp             CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE
T ss_pred             EcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE
Confidence                             0000100          0011122789999987776533         235669999999887


Q ss_pred             eEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758         154 DIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE  197 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~  197 (198)
                      ..+..+  .....++|+|||+ .+++.. .++.|.++|+.+++.++
T Consensus       308 ~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~  351 (368)
T 1mda_H          308 GPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS  351 (368)
T ss_dssp             ECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred             EEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence            776444  3688999999998 455666 59999999999988753

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.52  E-value=5.2e-11  Score=83.37  Aligned_cols=182  Identities=5%  Similarity=-0.074  Sum_probs=123.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++++++|+++++...++.|..|+.. ++ ...+........+..+++.|++...++ ...++.|..+|.......+
T Consensus        58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~d~~g~~~~~  134 (299)
T 2z2n_A           58 KVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFT-EMNGNRIGRITDDGKIREY  134 (299)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTTCCEEEE
T ss_pred             ceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEE-ecCCceEEEECCCCCEEEe
Confidence            47789999999988777668889999975 33 222221112346788999998876654 4467889889873211111


Q ss_pred             c------------c-ccCceEEEecCCCcEEEEEccCCCcceee-ecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          83 N------------V-HKDMTSAAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        83 ~------------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      .            . ..+.+.++...++.|..+|. + ++.... .......+..++++|+|+++++...++.|.+||. 
T Consensus       135 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-  211 (299)
T 2z2n_A          135 ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-  211 (299)
T ss_dssp             ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred             cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-
Confidence            0            0 12234555556678888888 4 333322 2334456889999999998777777889999999 


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +++........+...+.+++++++|+++++...++.|..||.
T Consensus       212 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~  253 (299)
T 2z2n_A          212 SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS  253 (299)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred             CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence            666443322334467899999999997777667788999997

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.52  E-value=4.3e-11  Score=83.44  Aligned_cols=170  Identities=9%  Similarity=0.000  Sum_probs=123.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC---
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN---   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~---   79 (198)
                      .+.+++++|+|++++  +.++.|..||. +++.+..+... ....+.++.+.|+++.+++.+..++.+..+|.....   
T Consensus        38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~-~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~  113 (276)
T 3no2_A           38 ECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP-AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSK  113 (276)
T ss_dssp             CCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC-TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEE
T ss_pred             CCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC-CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEE
Confidence            478899999999888  34678999998 78766666542 123577889999999988754326666666642110   


Q ss_pred             --------Ccc-------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          80 --------SPL-------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        80 --------~~~-------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                              ...       ....+.++++...++.|..||..  ++.+..+... ..+.++...|+|+.++++..++.|..
T Consensus       114 ~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~  190 (276)
T 3no2_A          114 TEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQ  190 (276)
T ss_dssp             EEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEE
T ss_pred             EeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEE
Confidence                    000       11234578888899999999987  5777777653 34567788899999999988889999


Q ss_pred             EEcCCCceeeEEecc-----CcccEEEEEEcCCCCEEEEe
Q psy8758         145 YLAHQGHSRDIYHTK-----RMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~  179 (198)
                      +|..+++.+..+...     ....+..+...++|.++++.
T Consensus       191 ~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          191 LNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             ECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             EeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence            999999998887422     11347888899999988876

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.50  E-value=7.6e-14  Score=101.30  Aligned_cols=172  Identities=9%  Similarity=0.015  Sum_probs=100.0

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc--cc----
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN--VH----   85 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~--~~----   85 (198)
                      ++..+++++.|+.|+.||..+++....+..    ..+.+..+.+++..+++ ++.|+.++.||..+.+....  .+    
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~-~s~dg~l~a~d~~tG~~~w~~~~~~~~~   82 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLP-DPNDGSLYTLGSKNNEGLTKLPFTIPEL   82 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEE-CTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEE-eCCCCEEEEEECCCCceeeeeeccCccc
Confidence            577899999999999999999987655543    34444455566655554 56899999999865443211  00    


Q ss_pred             --------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758          86 --------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        86 --------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~  157 (198)
                              .+..+++++.++.++.||.++ ++.+..+..+.    ...++|++..+++++.|+.|+.||.++++.+..+.
T Consensus        83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~  157 (369)
T 2hz6_A           83 VQASPCRSSDGILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT  157 (369)
T ss_dssp             HTTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred             cccCceEecCCEEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence                    233566778899999999998 66666665433    24567788899999999999999999998776652


Q ss_pred             ccCcccEEEEEEcCCC---CEEEEecCCCeEEEEecCCCccc
Q psy8758         158 TKRMQHVTHTVWSLDN---KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~---~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..   ......++++.   ..+++++.||.++.||.++|+.+
T Consensus       158 ~~---~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~  196 (369)
T 2hz6_A          158 YF---DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL  196 (369)
T ss_dssp             EE---EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred             cc---cccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence            21   12233344432   45667888999999999999865

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.50  E-value=5.4e-11  Score=87.46  Aligned_cols=185  Identities=8%  Similarity=-0.017  Sum_probs=121.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~~~~   80 (198)
                      ....++|+++++++++...++.|++||..++........   ..... ++|+|+++.++++. .++  .|..++......
T Consensus       132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~~~~g~~l~~~d-~~~~~~I~~~d~~~~~~  206 (409)
T 3hrp_A          132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG---FKGGK-PAVTKDKQRVYSIG-WEGTHTVYVYMKASGWA  206 (409)
T ss_dssp             CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET---CCBCB-CEECTTSSEEEEEB-SSTTCEEEEEEGGGTTC
T ss_pred             CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc---CCCCc-eeEecCCCcEEEEe-cCCCceEEEEEcCCCce
Confidence            467899999999777777778999999977654333222   22234 99999999888764 433  788888654322


Q ss_pred             --cc--------------cccc-CceEEEecCCCcEEEEEccCCCcceeee-----cCCCcce-E-EEEEccC-CCEEEE
Q psy8758          81 --PL--------------NVHK-DMTSAAANEDFNLYSYDIRQLNSPLNVH-----KDMTSAV-T-SVDYSPT-GREFVA  135 (198)
Q Consensus        81 --~~--------------~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~~i-~-~~~~sp~-~~~l~~  135 (198)
                        .+              ..+. +..++.+..++.|+.||.... . ...+     .+....- . .++|+|+ +.++++
T Consensus       207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~-~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~  284 (409)
T 3hrp_A          207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ-E-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS  284 (409)
T ss_dssp             EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC-C-EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred             eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC-C-EEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence              11              1112 233444666788999998762 2 2222     1111112 3 8999995 556666


Q ss_pred             eecCCcEEEEEcCCCceeeEEecc-------------CcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCcc
Q psy8758         136 GGYDKSLRLYLAHQGHSRDIYHTK-------------RMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEK  195 (198)
Q Consensus       136 ~~~d~~v~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~  195 (198)
                      -..++.|+.|+.... .....-..             .-.....++++|+|+++++-. .++.|+.|++.+++.
T Consensus       285 d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v  357 (409)
T 3hrp_A          285 DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV  357 (409)
T ss_dssp             ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred             eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence            667889999997654 22221110             013478999999999877777 889999999777653

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.49  E-value=1.1e-11  Score=97.70  Aligned_cols=182  Identities=6%  Similarity=-0.035  Sum_probs=116.1

Q ss_pred             ceeEEEECCCCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc---------
Q psy8758           3 HVTHTVWSLDNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF---------   68 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~---------   68 (198)
                      .+..++|||||++|+.+..+     ..|++||+.+++.....   .....+..++|+|| +.++.+.....         
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~  239 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL  239 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE---EEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc---CCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence            46789999999999877543     46999999988754321   11222357899999 98888753222         


Q ss_pred             ----cEEEEeccCCCC----cccc-------------ccCceEEEecC-----CCcEEEEEccCCCcc-eeeecCCCcce
Q psy8758          69 ----NLYSYDIRQLNS----PLNV-------------HKDMTSAAANE-----DFNLYSYDIRQLNSP-LNVHKDMTSAV  121 (198)
Q Consensus        69 ----~i~~~d~~~~~~----~~~~-------------~~~~~~~~~~~-----~~~i~~~d~~~~~~~-~~~~~~~~~~i  121 (198)
                          .|++|++.+...    .+..             ..+..++....     ...|++||+.+.... ...+..+....
T Consensus       240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~  319 (741)
T 1yr2_A          240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ  319 (741)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred             CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence                388999865431    1111             11123333332     347999999863113 45555555445


Q ss_pred             EEEEEccCCCEEEEeec----CCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         122 TSVDYSPTGREFVAGGY----DKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       122 ~~~~~sp~~~~l~~~~~----d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ... ++|+|+.|+..+.    ++.|.+||+.++  .....+ ..+...+..++|+ ++.++++...|+..++|.++
T Consensus       320 ~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~  392 (741)
T 1yr2_A          320 WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD  392 (741)
T ss_dssp             EEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred             EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence            444 3589998877765    345999999875  333333 4555567778887 56677888888887777554

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.49  E-value=7.9e-12  Score=98.43  Aligned_cols=188  Identities=7%  Similarity=-0.001  Sum_probs=119.7

Q ss_pred             eEEEECCCCceEEEeeCCCe--------------EEEEEccCCceeee-eeee-eecCceeeEEeCCCCCeEEEEecC--
Q psy8758           5 THTVWSLDNKFVISASDEMN--------------LRVWKAHASEKLGP-IRKV-VMSLRSNMVSWNPMEAFVFTAANE--   66 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~--------------i~i~~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~~~~~--   66 (198)
                      ..++|+|| +.|+.++.++.              |++|++.++..... +... .+...+..+.|+|+|++++.+...  
T Consensus       212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~  290 (741)
T 1yr2_A          212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT  290 (741)
T ss_dssp             CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred             ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence            57899999 98888776543              88899876653211 2111 122247889999999998887532  


Q ss_pred             --CccEEEEeccCC--C--Cccccc----------cCceEEEecC----CCcEEEEEccCCC-cceeeecCCCcceEEEE
Q psy8758          67 --DFNLYSYDIRQL--N--SPLNVH----------KDMTSAAANE----DFNLYSYDIRQLN-SPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        67 --d~~i~~~d~~~~--~--~~~~~~----------~~~~~~~~~~----~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~  125 (198)
                        ...|++||+.+.  .  ..+..+          .+..++..+.    ++.|..||+.... .....+..+...+..++
T Consensus       291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~  370 (741)
T 1yr2_A          291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG  370 (741)
T ss_dssp             CSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE
T ss_pred             CCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE
Confidence              347999998654  2  222211          2223333333    4569999987631 23334444455566777


Q ss_pred             EccCCCEEEEeecCCcEEEEEcC-CCceeeEEeccCcccEEEEEEcCCCCEEEE----ecCCCeEEEEecCCCc
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAH-QGHSRDIYHTKRMQHVTHTVWSLDNKFVIS----ASDEMNLRVWKAHASE  194 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~~dg~v~~w~~~~~~  194 (198)
                      ++ ++.++++...|+..++|.+. .+.....+...+...+..+.++|+++.|+.    ....+.|++||+.+++
T Consensus       371 ~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          371 IA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             EE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             EE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            77 55677788888887777554 344444442234567899999999886552    2345789999998876

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.49  E-value=1.1e-11  Score=89.74  Aligned_cols=190  Identities=11%  Similarity=-0.038  Sum_probs=117.5

Q ss_pred             eeEEEECCCCceEEEeeC--CCeEEEEEccCCceeeeeeeeee-----cCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           4 VTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGPIRKVVM-----SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      -..++|+|||++++++..  ++.|.++|+.+++....+.....     .+.-.-+..++||+.+++.....+.+..  .+
T Consensus       139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~--~~  216 (386)
T 3sjl_D          139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI--TH  216 (386)
T ss_dssp             GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE--EE
T ss_pred             CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEE--ee
Confidence            346899999999888863  68999999999887666643110     0000112445555554443222233311  11


Q ss_pred             CCC-----Ccccc-----ccCceEEEecCCCcEEEEEccCCC-cceeeec----------CCCcceEEEEEccCCCEEEE
Q psy8758          77 QLN-----SPLNV-----HKDMTSAAANEDFNLYSYDIRQLN-SPLNVHK----------DMTSAVTSVDYSPTGREFVA  135 (198)
Q Consensus        77 ~~~-----~~~~~-----~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~----------~~~~~i~~~~~sp~~~~l~~  135 (198)
                      +..     ..+..     .....++..+.++.+++.|+.... +....+.          -.......++++|+++.++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV  296 (386)
T 3sjl_D          217 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL  296 (386)
T ss_dssp             CCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred             cceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEE
Confidence            100     00000     012223345557899999987521 1222221          01233456888999887777


Q ss_pred             eec----------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEE-ecCCCeEEEEecCCCcccc
Q psy8758         136 GGY----------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVIS-ASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       136 ~~~----------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~-~~~dg~v~~w~~~~~~~~~  197 (198)
                      ...          .+.|.++|+.+++.+..+..+  ..+++++++||++ +|++ ...++.|.++|..+++.++
T Consensus       297 ~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~  368 (386)
T 3sjl_D          297 LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR  368 (386)
T ss_dssp             EEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             EeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence            543          257999999999998888655  4788999999997 6655 4568999999999998763

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.49  E-value=2e-11  Score=86.23  Aligned_cols=162  Identities=9%  Similarity=0.111  Sum_probs=108.8

Q ss_pred             ceeEEEECCCCceEEEeeCC---------------CeEEEEEccCCceeeeeeeeeecCceeeEEeC----CCCCeEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDE---------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWN----PMEAFVFTA   63 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~   63 (198)
                      .+.+++++++|+++++...+               +.|..++.. ++. ..+..  .......++|+    |+++.++++
T Consensus       118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~--~~~~~~~i~~~~~~d~dg~~l~v~  193 (314)
T 1pjx_A          118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-IQVDT--AFQFPNGIAVRHMNDGRPYQLIVA  193 (314)
T ss_dssp             CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-EEEEE--EESSEEEEEEEECTTSCEEEEEEE
T ss_pred             CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-EEecc--CCCCcceEEEecccCCCCCEEEEE
Confidence            47899999999877766554               456666654 432 22211  22345788999    998877776


Q ss_pred             ecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCC-cceEEEEEccCCCEEEEeecCCcE
Q psy8758          64 ANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        64 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                      ...++.|.+||....                  +.+.-      ......+..+. ..+..++++++|+++++...++.|
T Consensus       194 ~~~~~~i~~~~~~~~------------------g~~~~------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i  249 (314)
T 1pjx_A          194 ETPTKKLWSYDIKGP------------------AKIEN------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI  249 (314)
T ss_dssp             ETTTTEEEEEEEEET------------------TEEEE------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred             ECCCCeEEEEECCCC------------------Ccccc------ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence            556788888886521                  00000      01112222232 456789999999988888788899


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcCCCCE-EEEecCCCeEEEEecCCC
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF-VISASDEMNLRVWKAHAS  193 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~v~~w~~~~~  193 (198)
                      .+||..+++....+ ..+...+.+++|+|+++. +++...++.|..|++...
T Consensus       250 ~~~d~~~g~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          250 EVFGPDGGQPKMRI-RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEECTTCBSCSEEE-ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEcCCCCcEeEEE-eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            99999877665555 334467899999999994 455566789999998753

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.44  E-value=4e-10  Score=78.90  Aligned_cols=185  Identities=6%  Similarity=-0.077  Sum_probs=123.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++++++|+..++...++.|.+|+.. ++. ..+........+..+++.+++...++ ...++.|..+|.......+
T Consensus        21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~v~~~d~~g~~~~~   97 (300)
T 2qc5_A           21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-KEFEVPTPDAKVMCLIVSSLGDIWFT-ENGANKIGKLSKKGGFTEY   97 (300)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred             CcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-EEEECCCCCCcceeEEECCCCCEEEE-ecCCCeEEEECCCCCeEEe
Confidence            56789999999987777678899999986 442 22221112346788999998876654 4457789888876221111


Q ss_pred             cc-------------ccCceEEEecCCCcEEEEEccCCCcce-eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          83 NV-------------HKDMTSAAANEDFNLYSYDIRQLNSPL-NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        83 ~~-------------~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      ..             ..+.+.++...++.|..+|...  +.. ..+......+..++++|+|+++++...++.|..+|. 
T Consensus        98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-  174 (300)
T 2qc5_A           98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG--TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-  174 (300)
T ss_dssp             ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS--CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred             cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC--CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence            10             1223444445567787887752  222 222323456889999999997777766788999998 


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +++........+...+..++++++|+++++....+.|.+|+. +++
T Consensus       175 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~  219 (300)
T 2qc5_A          175 TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE  219 (300)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred             CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence            555544322234457899999999988777767788999998 443

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.44  E-value=1.5e-10  Score=81.56  Aligned_cols=184  Identities=11%  Similarity=0.120  Sum_probs=113.5

Q ss_pred             eEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-c
Q psy8758           5 THTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-L   82 (198)
Q Consensus         5 ~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~   82 (198)
                      .+..|+|++ .++++...++.|+.||..+++. ..   ......+.+++++|+++.++. .  +..|..||..+.... +
T Consensus        16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~---~~~~~~~~~i~~~~dG~l~v~-~--~~~l~~~d~~~g~~~~~   88 (297)
T 3g4e_A           16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QR---VTMDAPVSSVALRQSGGYVAT-I--GTKFCALNWKEQSAVVL   88 (297)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EE---EECSSCEEEEEEBTTSSEEEE-E--TTEEEEEETTTTEEEEE
T ss_pred             cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EE---EeCCCceEEEEECCCCCEEEE-E--CCeEEEEECCCCcEEEE
Confidence            467899955 4556666788999999987653 22   223567889999999995543 2  567888987643211 1


Q ss_pred             ccc------cCceEEEecCCCcE-------------------EEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-Ee
Q psy8758          83 NVH------KDMTSAAANEDFNL-------------------YSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AG  136 (198)
Q Consensus        83 ~~~------~~~~~~~~~~~~~i-------------------~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~  136 (198)
                      ...      ....-+..+.+|.+                   .+|.+...+.. ..+.......+.++|+|+++.|+ +.
T Consensus        89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv~~  167 (297)
T 3g4e_A           89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYYID  167 (297)
T ss_dssp             EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred             EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEEec
Confidence            000      00011112223332                   33333321222 22222234467899999998765 45


Q ss_pred             ecCCcEEEEEc--CCCcee--eEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         137 GYDKSLRLYLA--HQGHSR--DIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       137 ~~d~~v~v~d~--~~~~~~--~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.++.|.+|++  .++...  ..+  ...+......++++++|++.++...++.|..||.++|+.+
T Consensus       168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~  233 (297)
T 3g4e_A          168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL  233 (297)
T ss_dssp             GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred             CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence            56789999997  455432  112  1223356789999999998887777889999999988764

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.42  E-value=8.5e-10  Score=77.20  Aligned_cols=182  Identities=4%  Similarity=-0.105  Sum_probs=121.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.++++.++|++.++...++.|..+|.. ++. ..+........+..+++.+++...++ ...++.|..+|.......+
T Consensus        63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~~~~g~~~~~  139 (300)
T 2qc5_A           63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFT-QLNGDRIGKLTADGTIYEY  139 (300)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred             cceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEE-ccCCCeEEEECCCCCEEEc
Confidence            57789999999877776667889999986 543 22222112355789999998876654 4457788888865221111


Q ss_pred             c-------------cccCceEEEecCCCcEEEEEccCCCccee-eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          83 N-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        83 ~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                      .             ...+.+.++...++.|..+|..  ++... ........+..++++++|++.++....+.|.+||. 
T Consensus       140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-  216 (300)
T 2qc5_A          140 DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-  216 (300)
T ss_dssp             ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred             cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence            0             0122344455556778888873  33322 12233456889999999987777777788999998 


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +++........+...+.+++++++|+++++...++.|..++.
T Consensus       217 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~  258 (300)
T 2qc5_A          217 TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN  258 (300)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred             CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence            555444322334467899999999997777666789999987

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.42  E-value=3.2e-10  Score=80.01  Aligned_cols=187  Identities=8%  Similarity=0.031  Sum_probs=116.8

Q ss_pred             ceeEEEECCCCceEEE-------eeCCCeEEEEEccCCceeeeeeee---eecCceeeEEeCCC-CCeEEEEecCCccEE
Q psy8758           3 HVTHTVWSLDNKFVIS-------ASDEMNLRVWKAHASEKLGPIRKV---VMSLRSNMVSWNPM-EAFVFTAANEDFNLY   71 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~-------~~~d~~i~i~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~   71 (198)
                      ...+++|+++|+++++       ...++.|.+||..+++.. .+...   .+...+..++++++ +..+++ . ....|.
T Consensus        19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~-~~~~l~   95 (314)
T 1pjx_A           19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVA-D-MRLGLL   95 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEE-E-TTTEEE
T ss_pred             CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEE-E-CCCCEE
Confidence            3568999999988877       577889999998777642 22210   02345789999999 654443 3 344788


Q ss_pred             EEeccCCCC-cc-c----c------------ccCceEEEecCC---------------CcEEEEEccCCCcceeeecCCC
Q psy8758          72 SYDIRQLNS-PL-N----V------------HKDMTSAAANED---------------FNLYSYDIRQLNSPLNVHKDMT  118 (198)
Q Consensus        72 ~~d~~~~~~-~~-~----~------------~~~~~~~~~~~~---------------~~i~~~d~~~~~~~~~~~~~~~  118 (198)
                      .||.. ... .+ .    .            ..+.+.++...+               +.|..+|..  ++. ..+..+.
T Consensus        96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~-~~~~~~~  171 (314)
T 1pjx_A           96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQM-IQVDTAF  171 (314)
T ss_dssp             EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCE-EEEEEEE
T ss_pred             EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCE-EEeccCC
Confidence            88876 221 11 0    0            011233333332               455555543  222 2222233


Q ss_pred             cceEEEEEc----cCCCEEEEe-ecCCcEEEEEcC-CCceee--EE--eccCc-ccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         119 SAVTSVDYS----PTGREFVAG-GYDKSLRLYLAH-QGHSRD--IY--HTKRM-QHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       119 ~~i~~~~~s----p~~~~l~~~-~~d~~v~v~d~~-~~~~~~--~~--~~~~~-~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      .....++++    |+++.+..+ ..++.|.+||.. .++...  .+  ...+. ..+..++++++|+++++...++.|.+
T Consensus       172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~  251 (314)
T 1pjx_A          172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence            456789999    999765544 567899999986 443211  11  12222 56788999999998888777889999


Q ss_pred             EecCCCccc
Q psy8758         188 WKAHASEKL  196 (198)
Q Consensus       188 w~~~~~~~~  196 (198)
                      ||.++++.+
T Consensus       252 ~d~~~g~~~  260 (314)
T 1pjx_A          252 FGPDGGQPK  260 (314)
T ss_dssp             ECTTCBSCS
T ss_pred             EcCCCCcEe
Confidence            999877653

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.41  E-value=1.6e-10  Score=81.34  Aligned_cols=173  Identities=10%  Similarity=0.032  Sum_probs=110.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee---ecCceeeEEeCCCCCeEEEEecC----------Cc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV---MSLRSNMVSWNPMEAFVFTAANE----------DF   68 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~----------d~   68 (198)
                      +.+.+++++++|+++++ . +..|.+||..+++. ..+....   ....++.++++|+++..+.+...          .+
T Consensus        54 ~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~  130 (297)
T 3g4e_A           54 APVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG  130 (297)
T ss_dssp             SCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred             CceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence            35789999999995554 3 56799999877653 2222211   12346789999999976654321          23


Q ss_pred             cEEEEeccCCCCc------------cccccCceEEEecCCCcEEEEEcc-CCCcc-----eeeecCCCcceEEEEEccCC
Q psy8758          69 NLYSYDIRQLNSP------------LNVHKDMTSAAANEDFNLYSYDIR-QLNSP-----LNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        69 ~i~~~d~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~-----~~~~~~~~~~i~~~~~sp~~  130 (198)
                      .++.++.......            +......++++.+.++.|..|++. ..+..     +..+......+..++++++|
T Consensus       131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G  210 (297)
T 3g4e_A          131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG  210 (297)
T ss_dssp             EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred             EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence            4444443321111            111112345666677889999874 21221     12222334567899999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEc-CCCCEEEE
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS-LDNKFVIS  178 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~  178 (198)
                      ++.++....+.|..||..+++.+..+. .+...+++++|. |+++.|+.
T Consensus       211 ~lwva~~~~~~v~~~d~~tG~~~~~i~-~p~~~~t~~~f~g~d~~~L~v  258 (297)
T 3g4e_A          211 KLWVACYNGGRVIRLDPVTGKRLQTVK-LPVDKTTSCCFGGKNYSEMYV  258 (297)
T ss_dssp             CEEEEEETTTEEEEECTTTCCEEEEEE-CSSSBEEEEEEESGGGCEEEE
T ss_pred             CEEEEEcCCCEEEEEcCCCceEEEEEE-CCCCCceEEEEeCCCCCEEEE
Confidence            988887778899999999888877763 344679999998 88875543

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.40  E-value=5.2e-10  Score=77.02  Aligned_cols=185  Identities=11%  Similarity=0.060  Sum_probs=125.4

Q ss_pred             eeEEEECCCCceEEEeeC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           4 VTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...++|+|++.++++.+.  ++.|+++|+.+++....+...   .......+.+++..++.+...++.+.++|..+.+..
T Consensus        23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~   99 (266)
T 2iwa_A           23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNI   99 (266)
T ss_dssp             EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred             cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC---CCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence            368999998765554443  579999999999876665431   222223344446778777778899999998765321


Q ss_pred             --cccc---------cCceEEEecCCCcEEEEEccCCCcceeeecCC--C---cceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758          82 --LNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM--T---SAVTSVDYSPTGREFVAGGYDKSLRLY  145 (198)
Q Consensus        82 --~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~---~~i~~~~~sp~~~~l~~~~~d~~v~v~  145 (198)
                        +...         .+..++.+..++.|.++|..+ .+.+..+.-.  .   ..++.+.|. +|+..+....++.|.+.
T Consensus       100 ~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI  177 (266)
T 2iwa_A          100 KNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI  177 (266)
T ss_dssp             EEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred             EEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence              1111         122344445688999999987 4555555421  1   136788888 77666666668899999


Q ss_pred             EcCCCceeeEEeccC------------cccEEEEEEcCCCC-EEEEecCCCeEEEEecCCC
Q psy8758         146 LAHQGHSRDIYHTKR------------MQHVTHTVWSLDNK-FVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       146 d~~~~~~~~~~~~~~------------~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~  193 (198)
                      |..+++.+..+..+.            ......++|+|+++ +++++...+.+...++...
T Consensus       178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            999999888874321            13568999999986 5566777888988887654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.39  E-value=7.6e-10  Score=81.38  Aligned_cols=181  Identities=10%  Similarity=0.084  Sum_probs=121.4

Q ss_pred             EEECCCCceEEEeeCCC--eEEEEEccCCceeeeeeee-e-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           7 TVWSLDNKFVISASDEM--NLRVWKAHASEKLGPIRKV-V-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ++|+|+++.|+++..++  .|.+++...+.....+... . ....+.+++++|++..++++ ..++.|+.||........
T Consensus       176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~~~~I~~~d~~~~~~~~  254 (409)
T 3hrp_A          176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-DSNKNFGRFNVKTQEVTL  254 (409)
T ss_dssp             CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-CTTCEEEEEETTTCCEEE
T ss_pred             eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-ECCCcEEEEECCCCCEEE
Confidence            88999999888887765  7888888765443333111 1 23456889999966666664 568889999976432111


Q ss_pred             ------------------ccc--cCceEEEecCCCcEEEEEccCCCcceeeecCC---------------CcceEEEEEc
Q psy8758          83 ------------------NVH--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM---------------TSAVTSVDYS  127 (198)
Q Consensus        83 ------------------~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------~~~i~~~~~s  127 (198)
                                        ..+  .+.++++-..++.|+.|+...  . ...+.++               -.....++++
T Consensus       255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d  331 (409)
T 3hrp_A          255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVD  331 (409)
T ss_dssp             EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC
T ss_pred             EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe
Confidence                              111  233455555667777777653  2 2222222               1347899999


Q ss_pred             cCCCEEEEee-cCCcEEEEEcCCCceeeEEecc-------------CcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         128 PTGREFVAGG-YDKSLRLYLAHQGHSRDIYHTK-------------RMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       128 p~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      |+|+++++-. .++.|+.|++.++......-.+             .-.....++++|+|.++++-..++.|+.++++
T Consensus       332 ~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e  409 (409)
T 3hrp_A          332 EDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE  409 (409)
T ss_dssp             TTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred             CCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence            9999888877 8899999998887754433110             02458899999998888888888899888753

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.39  E-value=1.4e-10  Score=90.74  Aligned_cols=186  Identities=10%  Similarity=0.032  Sum_probs=120.4

Q ss_pred             eEEEECCCCceEEEeeCCC-------------eEEEEEccCCceee-eeeeee--ecCceeeEEeCCCCCeEEEEecC--
Q psy8758           5 THTVWSLDNKFVISASDEM-------------NLRVWKAHASEKLG-PIRKVV--MSLRSNMVSWNPMEAFVFTAANE--   66 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~-------------~i~i~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~--   66 (198)
                      ..++|+ ||+.|+.++.+.             .|++|++.++.... .+....  +......+.|+|++++++.+...  
T Consensus       178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~  256 (693)
T 3iuj_A          178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST  256 (693)
T ss_dssp             CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred             ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence            578999 999888887763             48999987764321 222111  12346788999999998776532  


Q ss_pred             -CccEEEEeccCCCC---ccc-----------cccCceEEEecC---CCcEEEEEccCCCc-ceeeecCCCcceEEEEEc
Q psy8758          67 -DFNLYSYDIRQLNS---PLN-----------VHKDMTSAAANE---DFNLYSYDIRQLNS-PLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        67 -d~~i~~~d~~~~~~---~~~-----------~~~~~~~~~~~~---~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~s  127 (198)
                       +..++++|+.....   .+.           ...+.+++....   .+.|..+|+.+... ..+.+..+...+.  .|+
T Consensus       257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s  334 (693)
T 3iuj_A          257 SGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH  334 (693)
T ss_dssp             SCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE
T ss_pred             CCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE
Confidence             35899999865421   111           112234444443   36799999887321 1345555555554  899


Q ss_pred             cCCCEEEEeecCC---cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC----CeEEEEecCCCc
Q psy8758         128 PTGREFVAGGYDK---SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE----MNLRVWKAHASE  194 (198)
Q Consensus       128 p~~~~l~~~~~d~---~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~v~~w~~~~~~  194 (198)
                      |+++.|+....++   .|++|++..+.. ..+.......+..+.++|+++.++....+    +.++.||+.+++
T Consensus       335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          335 SGSGYLFAEYMVDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             EETTEEEEEEEETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             EECCEEEEEEEECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            9999887766543   689999885543 33323344567888889988866544333    789999998775

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.33  E-value=7.5e-11  Score=85.57  Aligned_cols=134  Identities=11%  Similarity=0.086  Sum_probs=99.6

Q ss_pred             ceeeEEeCCCCCeEEEEecCCccEEEEeccCCC----------Cc-----------cccccCceEEEecCCCcEEEEEcc
Q psy8758          47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN----------SP-----------LNVHKDMTSAAANEDFNLYSYDIR  105 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~----------~~-----------~~~~~~~~~~~~~~~~~i~~~d~~  105 (198)
                      .++.+++++....+++++ .+ .+.+|++....          .+           +.. .+..++++ .++.|++||++
T Consensus        39 ~~nlLais~~~gll~a~~-~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f-d~~~L~v~-~~~~l~v~dv~  114 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAAS-GS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF-HGDQVLVS-TRNALYSLDLE  114 (388)
T ss_dssp             CCBCEEEETTTTEEEEEE-TT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE-ETTEEEEE-ESSEEEEEESS
T ss_pred             cccEEEEcCCCCEEEEeC-CC-EEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE-CCCEEEEE-cCCcEEEEEch
Confidence            578999999999888754 45 56668864222          00           111 33456666 88999999998


Q ss_pred             CCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758         106 QLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       106 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v  185 (198)
                      +. ........+..++.++.+.+.  .+++++.||.+.+||+.++....     +...|.+++|||+|  ++.+..||.+
T Consensus       115 sl-~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i  184 (388)
T 1xip_A          115 EL-SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSF  184 (388)
T ss_dssp             ST-TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred             hh-hccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence            74 344555667777888777654  38888999999999999887654     23589999999999  5678889999


Q ss_pred             EEEecCCCc
Q psy8758         186 RVWKAHASE  194 (198)
Q Consensus       186 ~~w~~~~~~  194 (198)
                      ++|+...++
T Consensus       185 ~~~~~~~~~  193 (388)
T 1xip_A          185 QSFAWRNGE  193 (388)
T ss_dssp             EEEEEETTE
T ss_pred             EEEcCCCcc
Confidence            999888766

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.32  E-value=2.8e-10  Score=89.05  Aligned_cols=170  Identities=11%  Similarity=0.054  Sum_probs=101.0

Q ss_pred             ceeEEEECCCCceEEEe-----eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISA-----SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .+..++|||||+++|.+     +....|+++|+.+++.....  . .......++|+ |++.++.+. .+..    +-. 
T Consensus       130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~--~-~~~k~~~~~Ws-Dg~~l~y~~-~~~~----~~~-  199 (693)
T 3iuj_A          130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP--L-KDVKFSGISWL-GNEGFFYSS-YDKP----DGS-  199 (693)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE--E-EEEESCCCEEE-TTTEEEEEE-SSCC----C---
T ss_pred             EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc--c-CCceeccEEEe-CCCEEEEEE-ecCc----ccc-
Confidence            46788999999988843     33357999999998753321  1 11123578999 999998865 3321    000 


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcc-eeee--cC-CCcceEEEEEccCCCEEEEeec----CCcEEEEEcCC
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSP-LNVH--KD-MTSAVTSVDYSPTGREFVAGGY----DKSLRLYLAHQ  149 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~--~~-~~~~i~~~~~sp~~~~l~~~~~----d~~v~v~d~~~  149 (198)
                                 ..........|++|++.+.... ...+  .. +......+.|+|||++|+....    .+.|+++|+.+
T Consensus       200 -----------~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~  268 (693)
T 3iuj_A          200 -----------ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ  268 (693)
T ss_dssp             ----------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred             -----------cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence                       0000112345666776653221 2222  22 3445778999999998865432    35899999987


Q ss_pred             Cce-eeEEeccCcccEEEEEEcCCCCEEE-EecC---CCeEEEEecCCCcc
Q psy8758         150 GHS-RDIYHTKRMQHVTHTVWSLDNKFVI-SASD---EMNLRVWKAHASEK  195 (198)
Q Consensus       150 ~~~-~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~---dg~v~~w~~~~~~~  195 (198)
                      +.. ...+ ..+....... |+++|..|+ ....   .+.|..+++.+++.
T Consensus       269 ~~~~~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~  317 (693)
T 3iuj_A          269 ENAPLLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP  317 (693)
T ss_dssp             TTCCCEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred             CCCceEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence            642 2233 3344444444 667666554 4333   36799999987643

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.31  E-value=2e-09  Score=76.02  Aligned_cols=181  Identities=8%  Similarity=0.044  Sum_probs=109.5

Q ss_pred             eeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .....|+|+|+ ++++...++.|..|+. +++ ...+..  ....+..++++++++.+++ ...++.|..|+.......+
T Consensus        47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~--~~~~~~gl~~d~dG~l~v~-~~~~~~v~~~~~~g~~~~~  121 (305)
T 3dr2_A           47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLD--ATAFTNGNAVDAQQRLVHC-EHGRRAITRSDADGQAHLL  121 (305)
T ss_dssp             EEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEE--SCSCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred             ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeC--CCCccceeeECCCCCEEEE-ECCCCEEEEECCCCCEEEE
Confidence            45788999998 5666667889999987 444 233332  3456789999999985544 3455778888864221111


Q ss_pred             ---------------ccc-cCceEEE----ecC-------------CCcEEEEEccCCCcceeeecCCCcceEEEEEccC
Q psy8758          83 ---------------NVH-KDMTSAA----ANE-------------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT  129 (198)
Q Consensus        83 ---------------~~~-~~~~~~~----~~~-------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~  129 (198)
                                     ... .+.+.++    +..             .+.|..+|..+ ++... +. .......++|+||
T Consensus       122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~~~~-~~-~~~~p~gl~~spd  198 (305)
T 3dr2_A          122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SPLQR-MA-DLDHPNGLAFSPD  198 (305)
T ss_dssp             ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CCCEE-EE-EESSEEEEEECTT
T ss_pred             EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC-CcEEE-Ee-cCCCCcceEEcCC
Confidence                           011 1223332    221             24566666644 23222 22 3345678999999


Q ss_pred             CCEEEEeecC------CcEEEEEcCCCcee--eEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         130 GREFVAGGYD------KSLRLYLAHQGHSR--DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       130 ~~~l~~~~~d------~~v~v~d~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ++.|+.+...      +.|.+|++..+...  ..+..........++++++|++.++. .+ .|.+|+.+ ++.
T Consensus       199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g~~  269 (305)
T 3dr2_A          199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-GQL  269 (305)
T ss_dssp             SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTT-SCE
T ss_pred             CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCC-CCE
Confidence            9987776654      78999998765421  11111122345678999999955544 44 59999884 443

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.30  E-value=3.2e-10  Score=81.42  Aligned_cols=178  Identities=8%  Similarity=-0.001  Sum_probs=108.6

Q ss_pred             cceeEEEECCCCceEEEeeC-----CCeEEEEEccCCceeeeeeee----eecCceeeEEeCCCCCeEEEEec---CCcc
Q psy8758           2 QHVTHTVWSLDNKFVISASD-----EMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPMEAFVFTAAN---EDFN   69 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~---~d~~   69 (198)
                      ..+.+++++++|+++++-..     ++.|.+||+.+++....+...    .....+..++++|++..++++..   .++.
T Consensus        67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~  146 (343)
T 2qe8_A           67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA  146 (343)
T ss_dssp             SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred             eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence            35789999999986665433     578999999888755544321    11234578999987667766654   5778


Q ss_pred             EEEEeccCCCCc--cccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE
Q psy8758          70 LYSYDIRQLNSP--LNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA  135 (198)
Q Consensus        70 i~~~d~~~~~~~--~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~  135 (198)
                      |.+||..+....  +..|..            ..+.+...++.+..|               ...+..|+|+|+|+.|+.
T Consensus       147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~---------------~~~~~gia~s~dg~~ly~  211 (343)
T 2qe8_A          147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRP---------------HLGVNGIVLDAENEWLYL  211 (343)
T ss_dssp             EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECC---------------CCCEEEEEECTTSCEEEE
T ss_pred             EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceece---------------ecccceeEeccCCCEEEE
Confidence            999998754311  111100            011111122221111               124678999999998888


Q ss_pred             eecCC-cEEEEEcC---CCc-----eeeE-EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         136 GGYDK-SLRLYLAH---QGH-----SRDI-YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       136 ~~~d~-~v~v~d~~---~~~-----~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +..++ .+..++..   .+.     .... ...++......++++++|+++++...++.|.+||..+++
T Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~  280 (343)
T 2qe8_A          212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA  280 (343)
T ss_dssp             EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred             EeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence            77665 45555432   111     0000 001222356678999999999888889999999985554

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.29  E-value=4.9e-10  Score=81.15  Aligned_cols=148  Identities=9%  Similarity=-0.009  Sum_probs=98.5

Q ss_pred             EEECCCCceEEEeeC-----CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEE
Q psy8758           7 TVWSLDNKFVISASD-----EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYS   72 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~   72 (198)
                      ....|+++.+++...     ++.|.++|..+++....+..-  .. . .+.++|++++++++..         .++.|.+
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG--~~-P-~va~spDG~~lyVan~~~~r~~~G~~~~~Vsv  113 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FL-P-NPVVADDGSFIAHASTVFSRIARGERTDYVEV  113 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC--CC-C-cEEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence            345789998888765     679999999988877666542  22 2 4999999999988642         2345666


Q ss_pred             EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec--CCcEE
Q psy8758          73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLR  143 (198)
Q Consensus        73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~--d~~v~  143 (198)
                      ||..+                              .+.+..+.-.       ......++|+|||+++++++.  ++.|.
T Consensus       114 iD~~t------------------------------~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~Vs  163 (386)
T 3sjl_D          114 FDPVT------------------------------LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVG  163 (386)
T ss_dssp             ECTTT------------------------------CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEE
T ss_pred             EECCC------------------------------CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEE
Confidence            66554                              3445544321       123557999999999888764  68999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ++|+.+++.+..+.....    ...+....+.+++.+.||.+.+.++.+
T Consensus       164 VID~~t~~vv~tI~v~g~----~~~~P~g~~~~~~~~~DG~~~~v~~~~  208 (386)
T 3sjl_D          164 VVDLEGKAFKRMLDVPDC----YHIFPTAPDTFFMHCRDGSLAKVAFGT  208 (386)
T ss_dssp             EEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred             EEECCCCcEEEEEECCCc----ceeecCCCceeEEECCCCCEEEEECCC
Confidence            999999998888743321    112222334455555666666666654

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.28  E-value=4.1e-09  Score=75.19  Aligned_cols=179  Identities=10%  Similarity=0.012  Sum_probs=110.4

Q ss_pred             eEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-c
Q psy8758           5 THTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-L   82 (198)
Q Consensus         5 ~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~   82 (198)
                      .+..|+|++ .++++...++.|..||..+++. ..+   .....+.++.|+|+++.++++  .+ .|.+||..+.... +
T Consensus        52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~---~~~~~v~~i~~~~dg~l~v~~--~~-gl~~~d~~~g~~~~~  124 (326)
T 2ghs_A           52 EGPTFDPASGTAWWFNILERELHELHLASGRK-TVH---ALPFMGSALAKISDSKQLIAS--DD-GLFLRDTATGVLTLH  124 (326)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE---ECSSCEEEEEEEETTEEEEEE--TT-EEEEEETTTCCEEEE
T ss_pred             cCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEE---ECCCcceEEEEeCCCeEEEEE--CC-CEEEEECCCCcEEEE
Confidence            578899975 4556666788999999877642 222   224568899999998877653  33 4888887543311 1


Q ss_pred             cc---------------c-cCceEEEecC------CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe-ecC
Q psy8758          83 NV---------------H-KDMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYD  139 (198)
Q Consensus        83 ~~---------------~-~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~d  139 (198)
                      ..               . .+.+.++...      .+.|..++  + ++. ..+.........++|+|+++.++.+ +.+
T Consensus       125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~  200 (326)
T 2ghs_A          125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GKV-TKLFADISIPNSICFSPDGTTGYFVDTKV  200 (326)
T ss_dssp             ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TEE-EEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred             eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-CcE-EEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence            00               0 1122222211      23444454  2 332 2222223456789999999876554 457


Q ss_pred             CcEEEEEcC--CC-cee--eEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         140 KSLRLYLAH--QG-HSR--DIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       140 ~~v~v~d~~--~~-~~~--~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +.|.+||+.  ++ ...  ..+  .......+..++++++|+++++...++.|..|+. +++.
T Consensus       201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~  262 (326)
T 2ghs_A          201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNH  262 (326)
T ss_dssp             CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCE
T ss_pred             CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCE
Confidence            899999986  55 321  112  1223356788999999998777666788999998 4543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.24  E-value=2.4e-09  Score=77.81  Aligned_cols=146  Identities=10%  Similarity=-0.025  Sum_probs=96.1

Q ss_pred             ECCCCceEEEeeC--CC---eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEEEe
Q psy8758           9 WSLDNKFVISASD--EM---NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYSYD   74 (198)
Q Consensus         9 ~s~~~~~l~~~~~--d~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~~d   74 (198)
                      ..|+++++++...  ..   .|.++|..+++....+..   .... .++++||+++++++..         .++.|.++|
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~---g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD  103 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG---GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD  103 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC---CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence            4578887777653  22   789999988876544433   2233 8999999999998742         234566666


Q ss_pred             ccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec--CCcEEEE
Q psy8758          75 IRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLRLY  145 (198)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~--d~~v~v~  145 (198)
                      ..+.                              +.+..+...       ......++|+|||++|++++.  ++.|.++
T Consensus       104 ~~t~------------------------------~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~vi  153 (373)
T 2mad_H          104 PVTF------------------------------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLV  153 (373)
T ss_pred             CCCC------------------------------cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEE
Confidence            5432                              333333211       123457999999999998874  5789999


Q ss_pred             EcCCCceeeE-EeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCcc
Q psy8758         146 LAHQGHSRDI-YHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       146 d~~~~~~~~~-~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      | .+++.... +..+  ..   +.+.|++ +.+++.+.||.+.+++. +++.
T Consensus       154 D-~t~~~~~~~i~~~--~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~  198 (373)
T 2mad_H          154 V-QGGSSDDQLLSSP--TC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGA  198 (373)
T ss_pred             E-CCCCEEeEEcCCC--ce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence            9 99888766 5222  12   3445554 34556677888888888 6654

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.24  E-value=2e-09  Score=73.43  Aligned_cols=156  Identities=8%  Similarity=0.016  Sum_probs=106.4

Q ss_pred             eeEEEECCCCceEEEeeCCC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           4 VTHTVWSLDNKFVISASDEM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+.|+ ++.++.+.+.+|  .|+.+|+.+++....+..   ..........+++..++...-.++.+.++|..+    
T Consensus        45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t----  116 (262)
T 3nol_A           45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN----  116 (262)
T ss_dssp             EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSSSEEEEEETTT----
T ss_pred             cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEeeCCEEEEEECcc----
Confidence            3567888 677666767665  899999999987666543   233334334445666666555566777777665    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC-
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR-  160 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~-  160 (198)
                                                .+.+.++....   ....+++|++.|+.+..++.|.++|..+.+....+.... 
T Consensus       117 --------------------------~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~  167 (262)
T 3nol_A          117 --------------------------LRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAH  167 (262)
T ss_dssp             --------------------------CCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEET
T ss_pred             --------------------------CcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccC
Confidence                                      35666665422   223455678888877778899999999988877764321 


Q ss_pred             c---ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         161 M---QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       161 ~---~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .   ..++.+.|. +|+.++..-.++.|.+.|.++|+.++
T Consensus       168 g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~  206 (262)
T 3nol_A          168 GEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTG  206 (262)
T ss_dssp             TEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred             CccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEE
Confidence            1   345668887 77766666678899999999998753

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.23  E-value=6.9e-10  Score=83.89  Aligned_cols=178  Identities=8%  Similarity=0.015  Sum_probs=120.0

Q ss_pred             ceeEEEE-C-CCCceEEEee------------------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEE
Q psy8758           3 HVTHTVW-S-LDNKFVISAS------------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFT   62 (198)
Q Consensus         3 ~v~~~~~-s-~~~~~l~~~~------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~   62 (198)
                      ....+++ + |+++++++++                  .++.+.+.|.++.+....+..   .+....++++|+++++++
T Consensus       135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V---gg~pd~~~~spdGk~~~v  211 (595)
T 1fwx_A          135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV---SGNLDNCDADYEGKWAFS  211 (595)
T ss_dssp             SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE---SSCCCCEEECSSSSEEEE
T ss_pred             CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe---CCCccceEECCCCCEEEE
Confidence            3567787 5 8999888874                  345788999988766555543   234567889999999999


Q ss_pred             EecCC--------------ccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCC-Ccc-eeeecCCCcceEEEEE
Q psy8758          63 AANED--------------FNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQL-NSP-LNVHKDMTSAVTSVDY  126 (198)
Q Consensus        63 ~~~~d--------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~i~~~~~  126 (198)
                      ++..+              ..+.+.|............ ...+     +.+.+.|.++. +.. +..+.. .....++.+
T Consensus       212 t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk-~~~i-----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~  284 (595)
T 1fwx_A          212 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD-YQEL-----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNM  284 (595)
T ss_dssp             EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC-SEEE-----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEE
T ss_pred             EecCcccCcchhhccccccceEEEeeccceeEeccCCC-eeEE-----CcEEEEeCcccCCceeEEEEec-CCCceEEEE
Confidence            87444              3466666554332221111 1111     55999999861 123 444432 234678999


Q ss_pred             ccCCCEEEEee-cCCcEEEEEcCCCc------------eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         127 SPTGREFVAGG-YDKSLRLYLAHQGH------------SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       127 sp~~~~l~~~~-~d~~v~v~d~~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      +|||+++++++ .+.+|.++|+.+.+            .....  .-....+.++|+|+|....+.-.|+.|.+||+++
T Consensus       285 sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v--~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          285 APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP--ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             cCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence            99999877665 57899999999653            22222  2235789999999995445667899999999876

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.22  E-value=9.8e-10  Score=80.50  Aligned_cols=158  Identities=11%  Similarity=0.057  Sum_probs=100.0

Q ss_pred             EEEECCCCceEEEee-------------------CCCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEe
Q psy8758           6 HTVWSLDNKFVISAS-------------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAA   64 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~-------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~   64 (198)
                      .+-|+|+++.+++..                   .+.+|.+||+.+++....+...........+.|  +|++++.++++
T Consensus       192 d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~  271 (462)
T 2ece_A          192 DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINM  271 (462)
T ss_dssp             CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred             eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence            477899999888874                   367999999988765555443111123345545  99999999887


Q ss_pred             c-----CCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-------CCCcceEEEEEccCCCE
Q psy8758          65 N-----EDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-------DMTSAVTSVDYSPTGRE  132 (198)
Q Consensus        65 ~-----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~sp~~~~  132 (198)
                      .     .+++|.+|.....  .+              ..+.+.|+.. .+....+.       +.......|.+||||++
T Consensus       272 e~~~~~Lss~V~v~~~d~g--~~--------------~~~~vIdi~~-~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf  334 (462)
T 2ece_A          272 VVSLKDLSSSIWLWFYEDG--KW--------------NAEKVIEIPA-EPLEGNLPEILKPFKAVPPLVTDIDISLDDKF  334 (462)
T ss_dssp             EEETTTCCEEEEEEEEETT--EE--------------EEEEEEEECC-EECCSSCCGGGGGGTEECCCCCCEEECTTSCE
T ss_pred             eeeccCCCceEEEEEecCC--ce--------------eEEEEEeCCC-ccccccccccccccccCCCceeEEEECCCCCE
Confidence            6     7788888775421  00              1122333322 11111110       00234678999999998


Q ss_pred             EEEeec-CCcEEEEEcCC---CceeeEEeccCc-------------ccEEEEEEcCCCCEEEEec
Q psy8758         133 FVAGGY-DKSLRLYLAHQ---GHSRDIYHTKRM-------------QHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       133 l~~~~~-d~~v~v~d~~~---~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~~~  180 (198)
                      |.++.. .+.|.+||+..   .+.+..+..+..             .....++++|||++|+++.
T Consensus       335 LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          335 LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            877765 78999999863   244444433310             1357899999999988776

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.20  E-value=4.6e-09  Score=71.76  Aligned_cols=154  Identities=6%  Similarity=-0.073  Sum_probs=104.9

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV   84 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~   84 (198)
                      ..+.|+ ++.++.+.+.+|.|+++|+.+++....+  .  ..........+++..++...-.++.+.++|..+       
T Consensus        58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l--~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T-------  125 (268)
T 3nok_A           58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--R--LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMP-------  125 (268)
T ss_dssp             EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--E--CTTCCEEEEEECSSCEEEEESSSCEEEEEETTT-------
T ss_pred             ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--C--CCCcceeEEEEeCCEEEEEEccCCEEEEEECCc-------
Confidence            466776 3566677778889999999999877666  2  223333223334555655555667777777665       


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC-c--
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR-M--  161 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~-~--  161 (198)
                                             .+.+.++.....   ...+.+|++.|+.+..++.|.++|..+.+.+..+.... .  
T Consensus       126 -----------------------l~~~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~  179 (268)
T 3nok_A          126 -----------------------PQRERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP  179 (268)
T ss_dssp             -----------------------TEEEEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred             -----------------------CcEEEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence                                   456666654222   23344678888887789999999999988877763321 1  


Q ss_pred             -ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         162 -QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       162 -~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                       ..++.+.|. +|+.++..-.++.|.+-|.++|+.++
T Consensus       180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~  215 (268)
T 3nok_A          180 VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVG  215 (268)
T ss_dssp             CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred             cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEE
Confidence             245778887 77766666678899999999998753

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.19  E-value=1.9e-08  Score=71.71  Aligned_cols=148  Identities=7%  Similarity=0.021  Sum_probs=92.4

Q ss_pred             ceeEEEECCCCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc--
Q psy8758           3 HVTHTVWSLDNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR--   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--   76 (198)
                      .+++++++|+|+++++...+    +...||.+.+++ ...+..  .......++|+|+++.++++.+.++.|++|+..  
T Consensus       135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~  211 (326)
T 2ghs_A          135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-VTKLFA--DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR  211 (326)
T ss_dssp             EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-EEEEEE--EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred             CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-EEEeeC--CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccc
Confidence            47889999999976654321    223444443443 222221  223467899999999887776667888888875  


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      +... +                      .. ...+..+......+..++++++|++.++...++.|.+||. +++....+
T Consensus       212 ~Gl~-~----------------------~~-~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i  266 (326)
T 2ghs_A          212 TGLP-T----------------------GK-AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY  266 (326)
T ss_dssp             TCCB-S----------------------SC-CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred             cCCc-c----------------------cC-ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence            2100 0                      00 0111112222344678999999998777766788999998 56655555


Q ss_pred             eccCcccEEEEEEc-CCCCEEEEe
Q psy8758         157 HTKRMQHVTHTVWS-LDNKFVISA  179 (198)
Q Consensus       157 ~~~~~~~v~~~~~s-~~~~~l~~~  179 (198)
                       ..+...+.+++|+ |+++.|+.+
T Consensus       267 -~~~~~~~~~~af~g~d~~~L~vt  289 (326)
T 2ghs_A          267 -EVPGKQTTCPAFIGPDASRLLVT  289 (326)
T ss_dssp             -ECSCSBEEEEEEESTTSCEEEEE
T ss_pred             -ECCCCCcEEEEEecCCCCEEEEE
Confidence             3344579999998 888765443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.16  E-value=6.2e-09  Score=81.23  Aligned_cols=171  Identities=8%  Similarity=0.025  Sum_probs=117.0

Q ss_pred             CCeEEEEEccCCceeeeeeeeeec------------------------------CceeeEEeCCCCCeEEEEecCCc---
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMS------------------------------LRSNMVSWNPMEAFVFTAANEDF---   68 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~~~~~~~~d~---   68 (198)
                      ++.|+.+|..+++..-.+......                              .....++++|++..+++. ..++   
T Consensus       189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~-~~~~~~w  267 (677)
T 1kb0_A          189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVG-TGNGSPW  267 (677)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESS
T ss_pred             CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEE-CCCCccc
Confidence            689999999999876555432111                              011356788888877764 3332   


Q ss_pred             ----------------cEEEEeccCCCCccccc----------------------cC---ceEEEecCCCcEEEEEccCC
Q psy8758          69 ----------------NLYSYDIRQLNSPLNVH----------------------KD---MTSAAANEDFNLYSYDIRQL  107 (198)
Q Consensus        69 ----------------~i~~~d~~~~~~~~~~~----------------------~~---~~~~~~~~~~~i~~~d~~~~  107 (198)
                                      .|..+|..+.+......                      .+   ..++.++.+|.++++|.++ 
T Consensus       268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-  346 (677)
T 1kb0_A          268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-  346 (677)
T ss_dssp             CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-
T ss_pred             cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-
Confidence                            48888887665432211                      01   4577888999999999988 


Q ss_pred             CcceeeecCCCc-----------ce------------------------EEEEEccCCCEEEEeec--------------
Q psy8758         108 NSPLNVHKDMTS-----------AV------------------------TSVDYSPTGREFVAGGY--------------  138 (198)
Q Consensus       108 ~~~~~~~~~~~~-----------~i------------------------~~~~~sp~~~~l~~~~~--------------  138 (198)
                      ++++..+.....           ++                        ..++++|++.++++...              
T Consensus       347 G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~  426 (677)
T 1kb0_A          347 GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEF  426 (677)
T ss_dssp             CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCT
T ss_pred             CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccc
Confidence            666654432110           01                        25789999887776533              


Q ss_pred             -----------------------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         139 -----------------------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       139 -----------------------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                                                   .+.|..||+.+++.+.....+  .++....+..++..++.++.||.+++||
T Consensus       427 g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D  504 (677)
T 1kb0_A          427 NQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYH  504 (677)
T ss_dssp             TCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             ccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC--CCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence                                         277999999999988776332  4455556777888888899999999999


Q ss_pred             cCCCccc
Q psy8758         190 AHASEKL  196 (198)
Q Consensus       190 ~~~~~~~  196 (198)
                      .++|+.+
T Consensus       505 ~~tG~~l  511 (677)
T 1kb0_A          505 AATGEKL  511 (677)
T ss_dssp             TTTCCEE
T ss_pred             CCCCcee
Confidence            9999976

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.15  E-value=3.1e-08  Score=67.08  Aligned_cols=156  Identities=5%  Similarity=0.003  Sum_probs=103.6

Q ss_pred             eeEEEECCCCceEEEeeCC--CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           4 VTHTVWSLDNKFVISASDE--MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+.|++ +.++.+.+.+  ..|+.+|+.+++....+..   ..........+.+..++...-.++.+.++|..+    
T Consensus        23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t----   94 (243)
T 3mbr_X           23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT----   94 (243)
T ss_dssp             EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSSSEEEEEETTT----
T ss_pred             cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEeeCCEEEEEECCc----
Confidence            45678876 5555555554  4899999999987665543   223333333444566666555566777777665    


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC-
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR-  160 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~-  160 (198)
                                                .+.+.++.....   ...+.++++.|+.+..++.|.++|..+.+.+..+.... 
T Consensus        95 --------------------------l~~~~ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~  145 (243)
T 3mbr_X           95 --------------------------LTPRARFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG  145 (243)
T ss_dssp             --------------------------TEEEEEEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred             --------------------------CcEEEEEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccC
Confidence                                      356666654322   23444677777777778999999999988877764321 


Q ss_pred             c---ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         161 M---QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       161 ~---~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .   ..++.+.|. +|+.++..-.++.|.+.|.++|+.++
T Consensus       146 g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~  184 (243)
T 3mbr_X          146 GRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVA  184 (243)
T ss_dssp             TEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred             CcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEE
Confidence            1   345677776 67766666678899999999998753

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.14  E-value=1.1e-08  Score=79.95  Aligned_cols=171  Identities=10%  Similarity=0.048  Sum_probs=114.3

Q ss_pred             CCeEEEEEccCCceeeeeeeeee-----------------------------cCceeeEEeCCCCCeEEEEecCCc----
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVM-----------------------------SLRSNMVSWNPMEAFVFTAANEDF----   68 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~~~~~~~~d~----   68 (198)
                      ++.|+.||..+++..-.+.....                             ......++++|+...+++. ..++    
T Consensus       182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~-~~~g~~w~  260 (689)
T 1yiq_A          182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIG-VGNGSLWD  260 (689)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEe-CCCCCccc
Confidence            68999999999987655542110                             0011256788887777664 4554    


Q ss_pred             ---------------cEEEEeccCCCCcccccc-------------------------CceEEEecCCCcEEEEEccCCC
Q psy8758          69 ---------------NLYSYDIRQLNSPLNVHK-------------------------DMTSAAANEDFNLYSYDIRQLN  108 (198)
Q Consensus        69 ---------------~i~~~d~~~~~~~~~~~~-------------------------~~~~~~~~~~~~i~~~d~~~~~  108 (198)
                                     .|..+|..+.+.......                         ...++.++.+|.++++|.++ +
T Consensus       261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G  339 (689)
T 1yiq_A          261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-G  339 (689)
T ss_dssp             HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-C
T ss_pred             cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-C
Confidence                           388889887654332110                         11567788999999999988 5


Q ss_pred             cceeeecCCC---------------------------------------cceEEEEEccCCCEEEEeec-----------
Q psy8758         109 SPLNVHKDMT---------------------------------------SAVTSVDYSPTGREFVAGGY-----------  138 (198)
Q Consensus       109 ~~~~~~~~~~---------------------------------------~~i~~~~~sp~~~~l~~~~~-----------  138 (198)
                      +++...+...                                       ..-..++|+|+..++++...           
T Consensus       340 ~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~  419 (689)
T 1yiq_A          340 ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPE  419 (689)
T ss_dssp             CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSS
T ss_pred             CEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccc
Confidence            6553221100                                       00123789998877776522           


Q ss_pred             ----------------------------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCe
Q psy8758         139 ----------------------------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN  184 (198)
Q Consensus       139 ----------------------------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~  184 (198)
                                                        +|.|+.||+.+++.+.....+  .++....++..+.+++.++.||.
T Consensus       420 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~  497 (689)
T 1yiq_A          420 APKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGR  497 (689)
T ss_dssp             CCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSE
T ss_pred             cccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC--CCccCccceECCCEEEEECCCCc
Confidence                                              377999999999988776332  33344456667888888999999


Q ss_pred             EEEEecCCCccc
Q psy8758         185 LRVWKAHASEKL  196 (198)
Q Consensus       185 v~~w~~~~~~~~  196 (198)
                      ++.||.++|+++
T Consensus       498 l~a~D~~tG~~l  509 (689)
T 1yiq_A          498 VIAYAADTGEKL  509 (689)
T ss_dssp             EEEEETTTCCEE
T ss_pred             EEEEECCCCccc
Confidence            999999999986

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.13  E-value=3.3e-07  Score=63.35  Aligned_cols=186  Identities=7%  Similarity=-0.004  Sum_probs=113.0

Q ss_pred             eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-
Q psy8758           4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-   81 (198)
                      ..+++|++++..|+.+. ..+.|..+++..... ..+.. ........++++|++..++.+....+.|.+++....... 
T Consensus        38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~  115 (267)
T 1npe_A           38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV  115 (267)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             EEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEE-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence            46889999766555544 568999999875542 22211 111356889999988888877666788999887643211 


Q ss_pred             c-----------ccc--cCceEEEecC--CCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758          82 L-----------NVH--KDMTSAAANE--DFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL  144 (198)
Q Consensus        82 ~-----------~~~--~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v  144 (198)
                      +           ...  .+.++++...  .+.|..+++..  .....+ .........++++|+++.|..+ ...+.|.+
T Consensus       116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~  193 (267)
T 1npe_A          116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC  193 (267)
T ss_dssp             EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence            1           011  1222333322  35677777653  222222 1223457899999987766544 45689999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +|+.......... . ......++.. ++..+++...++.|..+|..+++.+
T Consensus       194 ~~~~g~~~~~~~~-~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~  242 (267)
T 1npe_A          194 LNPAQPGRRKVLE-G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEM  242 (267)
T ss_dssp             EETTEEEEEEEEE-C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             EecCCCceEEEec-C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCce
Confidence            9997654433332 2 2344566654 3444445556789999999888754

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.08  E-value=1.5e-08  Score=74.55  Aligned_cols=114  Identities=9%  Similarity=-0.026  Sum_probs=80.6

Q ss_pred             CCCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEEEecc
Q psy8758          11 LDNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYSYDIR   76 (198)
Q Consensus        11 ~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~~d~~   76 (198)
                      ++++++++....     +.|.++|..+.+....+...   ... .+.++|++++++++..         .++.|.++|..
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG---~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~  157 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG---FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV  157 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC---SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC---CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence            467767666542     69999999998877666542   233 8999999999988642         24456666665


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec--CCcEEEEEc
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLRLYLA  147 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~  147 (198)
                      +                              .+.+..+.-.       ......+.|+|||+++++++.  ++.|.++|+
T Consensus       158 t------------------------------~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~  207 (426)
T 3c75_H          158 T------------------------------FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL  207 (426)
T ss_dssp             T------------------------------CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred             C------------------------------CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence            4                              3444444211       123457899999999998874  578999999


Q ss_pred             CCCceeeEEec
Q psy8758         148 HQGHSRDIYHT  158 (198)
Q Consensus       148 ~~~~~~~~~~~  158 (198)
                      .+++.+..+..
T Consensus       208 ~t~kvv~~I~v  218 (426)
T 3c75_H          208 EGKTFDRMLDV  218 (426)
T ss_dssp             TTTEEEEEEEC
T ss_pred             CCCeEEEEEEc
Confidence            99998877744

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.06  E-value=4.7e-08  Score=67.32  Aligned_cols=145  Identities=8%  Similarity=-0.027  Sum_probs=102.9

Q ss_pred             eeeEEeCCCCCeEEEEec--CCccEEEEeccCCCCccc-------------cccCceEEEecCCCcEEEEEccCCCccee
Q psy8758          48 SNMVSWNPMEAFVFTAAN--EDFNLYSYDIRQLNSPLN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLN  112 (198)
Q Consensus        48 v~~~~~~~~~~~~~~~~~--~d~~i~~~d~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~  112 (198)
                      ...+.|+|++ .++.+.+  .++.|.++|+.+.+....             ...+.++++...++.+.++|..+ .+.+.
T Consensus        23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t-~~v~~  100 (266)
T 2iwa_A           23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT-LSNIK  100 (266)
T ss_dssp             EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTT-TEEEE
T ss_pred             cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCC-CcEEE
Confidence            4789999986 4555433  257899999987652211             11334566777889999999987 56777


Q ss_pred             eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc----ccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758         113 VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM----QHVTHTVWSLDNKFVISASDEMNLRVW  188 (198)
Q Consensus       113 ~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~dg~v~~w  188 (198)
                      .+.....  ....+++||+.++++..++.|.++|..+.+....+..+..    ..++.+.|. +|+.++....++.|.+-
T Consensus       101 ~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI  177 (266)
T 2iwa_A          101 NFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI  177 (266)
T ss_dssp             EEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred             EEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence            7753311  2345777888777777789999999999888777643321    247788888 77666666678999999


Q ss_pred             ecCCCcccc
Q psy8758         189 KAHASEKLE  197 (198)
Q Consensus       189 ~~~~~~~~~  197 (198)
                      |..+++.++
T Consensus       178 D~~tg~V~~  186 (266)
T 2iwa_A          178 SAKDGTLLG  186 (266)
T ss_dssp             ETTTCCEEE
T ss_pred             ECCCCcEEE
Confidence            999998653

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.01  E-value=1.2e-07  Score=69.62  Aligned_cols=137  Identities=9%  Similarity=0.049  Sum_probs=95.8

Q ss_pred             CCCCeEEEEecCCccEEEEeccCCCC------cc------------ccc-----cCceEEEecCC------CcEEEEEcc
Q psy8758          55 PMEAFVFTAANEDFNLYSYDIRQLNS------PL------------NVH-----KDMTSAAANED------FNLYSYDIR  105 (198)
Q Consensus        55 ~~~~~~~~~~~~d~~i~~~d~~~~~~------~~------------~~~-----~~~~~~~~~~~------~~i~~~d~~  105 (198)
                      ++.+++++.+..+..|.++|+.+...      .+            ..|     .+.+++++..+      +.+.++|..
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence            88999999988899999999864411      11            111     22355555444      789999998


Q ss_pred             CCCcceeeecCCCc---ceEEEEEccCCCEEEEee-------------------cCCcEEEEEcCCCceeeEEecc-Ccc
Q psy8758         106 QLNSPLNVHKDMTS---AVTSVDYSPTGREFVAGG-------------------YDKSLRLYLAHQGHSRDIYHTK-RMQ  162 (198)
Q Consensus       106 ~~~~~~~~~~~~~~---~i~~~~~sp~~~~l~~~~-------------------~d~~v~v~d~~~~~~~~~~~~~-~~~  162 (198)
                      + .+.+..++....   -...+.|+|+++.++++.                   ...+|.+||+.+++....+..+ ...
T Consensus       173 T-~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          173 S-FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             T-CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             C-CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence            7 567777653222   234588899999998884                   3689999999998887777554 223


Q ss_pred             cEEEEEE--cCCCCEEEEec------CCCeEEEEecCC
Q psy8758         163 HVTHTVW--SLDNKFVISAS------DEMNLRVWKAHA  192 (198)
Q Consensus       163 ~v~~~~~--s~~~~~l~~~~------~dg~v~~w~~~~  192 (198)
                      ....+.|  +|++++++.++      .+++|.+|..+.
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~  289 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED  289 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence            4566666  99999877665      567887766543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.00  E-value=1.4e-08  Score=72.97  Aligned_cols=157  Identities=10%  Similarity=0.106  Sum_probs=91.1

Q ss_pred             eeEEEECCCCceE-EEee---CCCeEEEEEccCCceeeeeeeee---------------------------ecCceeeEE
Q psy8758           4 VTHTVWSLDNKFV-ISAS---DEMNLRVWKAHASEKLGPIRKVV---------------------------MSLRSNMVS   52 (198)
Q Consensus         4 v~~~~~s~~~~~l-~~~~---~d~~i~i~~~~~~~~~~~~~~~~---------------------------~~~~v~~~~   52 (198)
                      +..++++|++..+ ++-.   .++.|.+||+.+++..+.+..+.                           ....+..++
T Consensus       122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia  201 (343)
T 2qe8_A          122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV  201 (343)
T ss_dssp             CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE
T ss_pred             cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE
Confidence            5788999865444 4444   57899999998776443331100                           001245667


Q ss_pred             eCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCccee--eecCCCcceEEEEEccCC
Q psy8758          53 WNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        53 ~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~  130 (198)
                      |+|+++.++++......++.++......                +.+     .. .+...  ...++......++++++|
T Consensus       202 ~s~dg~~ly~~~~~~~~l~~~~~~~~~~----------------~~~-----~~-~~~~~~~~~~g~~g~pdgia~d~~G  259 (343)
T 2qe8_A          202 LDAENEWLYLSPMHSTSMYRIKSADLSN----------------LQL-----TD-AELGSKIERYSEKPICDGISIDKDH  259 (343)
T ss_dssp             ECTTSCEEEEEESSCSEEEEEEHHHHTC----------------TTC-----CH-HHHHTTCEEEEECCSCSCEEECTTC
T ss_pred             eccCCCEEEEEeCCCCeEEEEEHHHhcC----------------CCC-----Ch-hhhhcceEecccCCCCceEEECCCC
Confidence            7777766665433333444444321000                000     00 00000  111222345679999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      +++++...++.|.+||..+++........+...+.+++|.++++++++.+..
T Consensus       260 ~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~  311 (343)
T 2qe8_A          260 NIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL  311 (343)
T ss_dssp             CEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred             CEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence            9999988899999999856665443322234578999999999887776543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.99  E-value=6.1e-08  Score=68.37  Aligned_cols=145  Identities=7%  Similarity=0.051  Sum_probs=89.6

Q ss_pred             ceeEEEECCCCceEEE----eeC-------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758           3 HVTHTVWSLDNKFVIS----ASD-------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~----~~~-------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      .+++++++|+|++.++    |..             .+.|..+|..+++..... .   ......++|+|+++.++++..
T Consensus       132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~---~~~p~gl~~spdg~~lyv~~~  207 (305)
T 3dr2_A          132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D---LDHPNGLAFSPDEQTLYVSQT  207 (305)
T ss_dssp             CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E---ESSEEEEEECTTSSEEEEEEC
T ss_pred             CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c---CCCCcceEEcCCCCEEEEEec
Confidence            3578999999998875    331             245667776556533222 1   234578999999998877643


Q ss_pred             C-----CccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          66 E-----DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        66 ~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                      .     .+.|+.|++....                   +     .. .....  .........++++++|++.++. .+ 
T Consensus       208 ~~~~~~~~~i~~~~~~~~~-------------------l-----~~-~~~~~--~~~~~~pdgi~~d~~G~lwv~~-~~-  258 (305)
T 3dr2_A          208 PEQGHGSVEITAFAWRDGA-------------------L-----HD-RRHFA--SVPDGLPDGFCVDRGGWLWSSS-GT-  258 (305)
T ss_dssp             CC---CCCEEEEEEEETTE-------------------E-----EE-EEEEE--CCSSSCCCSEEECTTSCEEECC-SS-
T ss_pred             CCcCCCCCEEEEEEecCCC-------------------c-----cC-CeEEE--ECCCCCCCeEEECCCCCEEEec-CC-
Confidence            3     2567777765320                   0     00 00000  1112334568899999955544 44 


Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                      .|.+|+. .++....+...  ..+.+++|+|+++.|..++.++
T Consensus       259 gv~~~~~-~g~~~~~~~~~--~~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          259 GVCVFDS-DGQLLGHIPTP--GTASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             EEEEECT-TSCEEEEEECS--SCCCEEEECTTSCEEEEEETTE
T ss_pred             cEEEECC-CCCEEEEEECC--CceeEEEEeCCCCEEEEEcCCe
Confidence            4999998 45555555333  2588999999998777766554

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.96  E-value=1.4e-08  Score=76.87  Aligned_cols=168  Identities=11%  Similarity=0.117  Sum_probs=102.9

Q ss_pred             eEEEECCCCceEEEeeCCC--------------------------------------eEEEEEccC--Cce-eeeeeeee
Q psy8758           5 THTVWSLDNKFVISASDEM--------------------------------------NLRVWKAHA--SEK-LGPIRKVV   43 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~--------------------------------------~i~i~~~~~--~~~-~~~~~~~~   43 (198)
                      ..++++|+|+++++.+.+.                                      .|.+.|..+  ++. ...+   .
T Consensus       198 d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~I---p  274 (595)
T 1fwx_A          198 DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYI---P  274 (595)
T ss_dssp             CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEE---E
T ss_pred             cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEE---e
Confidence            4578899999888877442                                      356666655  322 1222   2


Q ss_pred             ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE
Q psy8758          44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS  123 (198)
Q Consensus        44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~  123 (198)
                      ......++.++|||+++++++..+..+.++|+.+....+.             +++   +.+  .......+ -......
T Consensus       275 vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~-------------~~l---~~~--~~v~~~v~-vG~gP~h  335 (595)
T 1fwx_A          275 IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY-------------ENA---DPR--SAVVAEPE-LGLGPLH  335 (595)
T ss_dssp             EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH-------------SCC---CGG--GGEEECCB-CCSCEEE
T ss_pred             cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccc-------------ccc---Ccc--cceEEEcC-CCCCcce
Confidence            2345678999999999999988889999999885421110             000   111  12223332 2345678


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCC----------CceeeEEec----cCcccEEEEEEcCCCCEEEEec---CCCe--
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQ----------GHSRDIYHT----KRMQHVTHTVWSLDNKFVISAS---DEMN--  184 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~----------~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~---~dg~--  184 (198)
                      ++|+|+|...++.-.|++|.+||+..          .+.+..+..    +|...-..+.++|||++|+++.   .|+.  
T Consensus       336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~  415 (595)
T 1fwx_A          336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN  415 (595)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred             EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence            99999994444556799999999987          344444422    1111112235589999998864   3432  


Q ss_pred             --------EEEEecCCCc
Q psy8758         185 --------LRVWKAHASE  194 (198)
Q Consensus       185 --------v~~w~~~~~~  194 (198)
                              -.++|+..++
T Consensus       416 ~gp~~~~~~ql~dis~~~  433 (595)
T 1fwx_A          416 VGPLKPENDQLIDISGDK  433 (595)
T ss_dssp             CCSSCCEEEEEEECSSSS
T ss_pred             CCCCCCCcceEEEcCCCc
Confidence                    2889985544

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.91  E-value=2.5e-07  Score=73.18  Aligned_cols=161  Identities=12%  Similarity=0.136  Sum_probs=91.5

Q ss_pred             ceeEEEEC-CCCceEEEeeC-C----CeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           3 HVTHTVWS-LDNKFVISASD-E----MNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         3 ~v~~~~~s-~~~~~l~~~~~-d----~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      .+...+|| |||++||.+.. +    ..|+++|+.++ +.+..  ..  ......+.|+||++.++.+. .+..      
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~--~~~~~~~~WspDg~~l~y~~-~d~~------  243 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV--SGTNGEIVWGPDHTSLFYVT-KDET------  243 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE--EEECSCCEECSSTTEEEEEE-ECTT------
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc--cCceeeEEEecCCCEEEEEE-ECCC------
Confidence            35678999 99998885532 2    35999999887 53211  11  11235789999999888864 2210      


Q ss_pred             cCCCCccccccCceEEEecCCCcEEEEEccCCCc-ceeeec-CCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCC
Q psy8758          76 RQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNS-PLNVHK-DMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQG  150 (198)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~  150 (198)
                                        ....+|+.+++.+... ....+. ........+.|||||++|+..+.   ...|+++|+.++
T Consensus       244 ------------------~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~  305 (751)
T 2xe4_A          244 ------------------LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG  305 (751)
T ss_dssp             ------------------CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred             ------------------CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence                              0001234444433111 112222 22234567899999998876653   447888999876


Q ss_pred             c-ee--eEEeccCcccEEEEEEcCCCCEEEEecCC----CeEEEEecCC
Q psy8758         151 H-SR--DIYHTKRMQHVTHTVWSLDNKFVISASDE----MNLRVWKAHA  192 (198)
Q Consensus       151 ~-~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~v~~w~~~~  192 (198)
                      . ..  ..+.........++.|+.++.+++....+    ..|..+++.+
T Consensus       306 ~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          306 NAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             TTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             CCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence            3 12  22222333455666665544444444333    3677777764

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.91  E-value=6.8e-07  Score=66.18  Aligned_cols=156  Identities=6%  Similarity=0.063  Sum_probs=97.7

Q ss_pred             ceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc----cEEEEeccC
Q psy8758           3 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF----NLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~----~i~~~d~~~   77 (198)
                      ....++++| ++..|+.+...+.|+.+|+..+.. ..+..  .......++|+++++.++++...++    .+...+...
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g  214 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES  214 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence            346889998 455666665557888999876543 23222  2345789999999997777643222    122222211


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      .                             ......+.. ......++++| ++.++++-..++.|..++...+......
T Consensus       215 ~-----------------------------~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~  264 (430)
T 3tc9_A          215 G-----------------------------FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF  264 (430)
T ss_dssp             T-----------------------------SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             c-----------------------------eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence            0                             010111111 22356788999 6776666667889999999877653333


Q ss_pred             eccCcccEEEEEEcCCCCEE-EEecCCCeEEEEecC
Q psy8758         157 HTKRMQHVTHTVWSLDNKFV-ISASDEMNLRVWKAH  191 (198)
Q Consensus       157 ~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~  191 (198)
                      ..+.......++|+|+|++| ++-...+.|..++.+
T Consensus       265 ~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          265 TIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             EcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            23333457899999999954 455567889998765

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.89  E-value=1.9e-06  Score=60.76  Aligned_cols=182  Identities=8%  Similarity=0.032  Sum_probs=107.8

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-cEEEEeccCCCCc-
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-NLYSYDIRQLNSP-   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~~d~~~~~~~-   81 (198)
                      ...++|+++|+++++-...+.|..||.... ....+   .....+..+++.++++.+++....++ .+..+|..+.... 
T Consensus        34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           34 LENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA---TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             EEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE---ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             cceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE---eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            467899999986666667889999987543 22222   22345788999999986554322222 4666665443211 


Q ss_pred             cc-------------cccCceEEEecCCCcEEEEEccCCCcceeee---------cCCCcceEEEEEccCCCEEEEe-ec
Q psy8758          82 LN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH---------KDMTSAVTSVDYSPTGREFVAG-GY  138 (198)
Q Consensus        82 ~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~sp~~~~l~~~-~~  138 (198)
                      +.             ......+++-..++.|+.+|.......+...         ...-...+.+  +|+++.|..+ ..
T Consensus       110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~  187 (306)
T 2p4o_A          110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE  187 (306)
T ss_dssp             EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred             EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence            00             0111234444467888888876411111100         0111234555  8888766554 45


Q ss_pred             CCcEEEEEcCC-Cce--eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         139 DKSLRLYLAHQ-GHS--RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       139 d~~v~v~d~~~-~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .+.|..|++.. ++.  ...+...  .....++++++|+++++....+.|.+++.. |+
T Consensus       188 ~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~  243 (306)
T 2p4o_A          188 KMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS  243 (306)
T ss_dssp             TTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred             CCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence            78999999875 332  1222111  345678999999987777777889999875 44

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.88  E-value=1.7e-07  Score=73.21  Aligned_cols=79  Identities=15%  Similarity=0.077  Sum_probs=59.1

Q ss_pred             CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEE
Q psy8758          97 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV  176 (198)
Q Consensus        97 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  176 (198)
                      +.|..||+.+ ++.+..+. +..+.....+..++..++.++.|+.+++||..+++.+..+..++.....-+.|.++|+.+
T Consensus       457 g~l~A~D~~t-G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~  534 (677)
T 1kb0_A          457 GRLLAWDPVA-QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY  534 (677)
T ss_dssp             EEEEEEETTT-TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cEEEEEeCCC-CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence            7799999988 66666654 233445566777888888899999999999999999988866654444556777888744


Q ss_pred             E
Q psy8758         177 I  177 (198)
Q Consensus       177 ~  177 (198)
                      +
T Consensus       535 v  535 (677)
T 1kb0_A          535 V  535 (677)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.87  E-value=7.8e-07  Score=64.47  Aligned_cols=180  Identities=10%  Similarity=0.030  Sum_probs=106.2

Q ss_pred             CCceEEEeeCCCeEEEEEccCCceeeeeeeeee-------cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVM-------SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV   84 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~   84 (198)
                      .+..+++++.++.|..+|..+++..........       ...+.. ....++..+++ ++.++.+..+|..+.+.....
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v-~~~~g~l~a~d~~tG~~~W~~  129 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYI-GSEKAQVYALNTSDGTVAWQT  129 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEE-EETTSEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEE-EcCCCEEEEEECCCCCEEEEE
Confidence            345677788889999999998886544433110       111211 11223455555 457889999998765533221


Q ss_pred             -----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcce-----EEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          85 -----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAV-----TSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        85 -----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i-----~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                                 ..+..++.++.++.+..+|.++ ++.+..........     ......  +..++.+..++.+..+|..
T Consensus       130 ~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~t-G~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~  206 (376)
T 3q7m_A          130 KVAGEALSRPVVSDGLVLIHTSNGQLQALNEAD-GAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME  206 (376)
T ss_dssp             ECSSCCCSCCEEETTEEEEECTTSEEEEEETTT-CCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred             eCCCceEcCCEEECCEEEEEcCCCeEEEEECCC-CcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence                       1123577788899999999987 66665554322111     112222  4567778889999999999


Q ss_pred             CCceeeEEeccCccc------EEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQH------VTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~------v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++.+..........      +..+.-.|  .+..++.++.++.+..+|.++|+.+
T Consensus       207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~  262 (376)
T 3q7m_A          207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM  262 (376)
T ss_dssp             TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE
T ss_pred             CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE
Confidence            998876653221100      00011111  2345566667788888888887754

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.86  E-value=1.6e-06  Score=62.79  Aligned_cols=172  Identities=10%  Similarity=-0.014  Sum_probs=104.6

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc------
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH------   85 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~------   85 (198)
                      .++.++.++.+..+|..+++............   ........  +..+++ +..++.+..+|..+........      
T Consensus       145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~  221 (376)
T 3q7m_A          145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATG  221 (376)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEE-CCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCC
Confidence            55666677778888877776544433211000   00111121  334444 4578888888886554322110      


Q ss_pred             ----------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          86 ----------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        86 ----------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                      .+..+..++.++.+..+|.++ ++.+.....  .....+..  ++..+..++.++.+..+|..+
T Consensus       222 ~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t-G~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~t  296 (376)
T 3q7m_A          222 STEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS-GQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDG  296 (376)
T ss_dssp             --------CCCCCCEEETTEEEEECTTSCEEEEETTT-CCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTT
T ss_pred             CcccccccccCCCcEEECCEEEEEecCcEEEEEECCC-CcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCC
Confidence                            123467777899999999987 565554432  22334443  366777888899999999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.+..........+..+..  .+..|+.++.+|.++.+|.++|+.+
T Consensus       297 G~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~  341 (376)
T 3q7m_A          297 GVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV  341 (376)
T ss_dssp             CCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence            98876653122222222222  2456777888999999999998865

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.85  E-value=4.2e-07  Score=71.20  Aligned_cols=180  Identities=16%  Similarity=0.068  Sum_probs=114.5

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecC--------ce-eeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL--------RS-NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      +..+++++.++.|..+|..+++..-.+.......        .+ ..+..  .+..+++ ++.|+.+..+|.++.+....
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v-~~~dg~l~AlDa~TG~~~W~  146 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYV-GVLDGRLEAIDAKTGQRAWS  146 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEE-ECTTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEE-EccCCEEEEEECCCCCEeee
Confidence            4467777788899999999998765554321100        00 11222  3455655 46789999999876654322


Q ss_pred             ccc-----------------CceEEEec------CCCcEEEEEccCCCcceeeecCCC----------------------
Q psy8758          84 VHK-----------------DMTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMT----------------------  118 (198)
Q Consensus        84 ~~~-----------------~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~----------------------  118 (198)
                      ...                 +..++.+.      .++.|+.||.++ ++.+..+....                      
T Consensus       147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  225 (689)
T 1yiq_A          147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAET-GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD  225 (689)
T ss_dssp             EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT-CCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred             ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCC-CcEEEEecccCCCcccccccccccccccccCCc
Confidence            110                 12233332      368999999998 66665543110                      


Q ss_pred             ---------cceEEEEEccCCCEEEEeecCC-------------------cEEEEEcCCCceeeEEecc-Cc-------c
Q psy8758         119 ---------SAVTSVDYSPTGREFVAGGYDK-------------------SLRLYLAHQGHSRDIYHTK-RM-------Q  162 (198)
Q Consensus       119 ---------~~i~~~~~sp~~~~l~~~~~d~-------------------~v~v~d~~~~~~~~~~~~~-~~-------~  162 (198)
                               .....++++|++..++.+..++                   .|..+|..+|+.+..+... |.       .
T Consensus       226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~  305 (689)
T 1yiq_A          226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ  305 (689)
T ss_dssp             THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence                     0112578899888888887775                   3999999999998776432 21       1


Q ss_pred             cEEEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         163 HVTHTVWSLDNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       163 ~v~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+.-.....+|+   .++.++.+|.++++|.++|+.+
T Consensus       306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  342 (689)
T 1yiq_A          306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL  342 (689)
T ss_dssp             CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred             CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence            222222233565   7888999999999999999976

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.82  E-value=8.8e-10  Score=79.99  Aligned_cols=133  Identities=14%  Similarity=0.088  Sum_probs=69.3

Q ss_pred             CCCeEEEEecCCccEEEEeccCCCCcccc-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCc-ceE-
Q psy8758          56 MEAFVFTAANEDFNLYSYDIRQLNSPLNV-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS-AVT-  122 (198)
Q Consensus        56 ~~~~~~~~~~~d~~i~~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~-  122 (198)
                      ++..+++ ++.|+.+..||..+.+.....           ..+.++++++.|+.++.||..+ ++.+..+..+.. .+. 
T Consensus         8 ~~~~v~~-gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t-G~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFV-STLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN-NEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEE-EETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCCHHHHHTT
T ss_pred             eCCEEEE-EcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCC-CceeeeeeccCcccccc
Confidence            3556655 467889999998765533221           1223577778999999999987 555544433211 110 


Q ss_pred             EEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         123 SVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       123 ~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +..+. ++..+++++.++.++.||..+|+.+..+...  .   ...++|++..+++++.|+.|+.||.++|+.+
T Consensus        86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~--~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~  153 (369)
T 2hz6_A           86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA--F---ADSLSPSTSLLYLGRTEYTITMYDTKTRELR  153 (369)
T ss_dssp             CSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred             CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC--C---cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence            11111 3456778888999999999999987766322  1   2356778888888999999999999999875

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.81  E-value=7.1e-07  Score=69.67  Aligned_cols=171  Identities=9%  Similarity=0.038  Sum_probs=109.7

Q ss_pred             CCeEEEEEccCCceeeeeeeeee-----------------------------cCceeeEEeCCCCCeEEEEecCCc----
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVM-----------------------------SLRSNMVSWNPMEAFVFTAANEDF----   68 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~~~~~~~~d~----   68 (198)
                      +|.|..+|..+++..-.+.....                             ......+++.|+...+++. ..++    
T Consensus       177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~-~~~g~~w~  255 (668)
T 1kv9_A          177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVG-TGNGSPWN  255 (668)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEe-CCCCCccc
Confidence            58999999999987655543110                             0011246777777777654 4444    


Q ss_pred             ---------------cEEEEeccCCCCcccccc-------------------------CceEEEecCCCcEEEEEccCCC
Q psy8758          69 ---------------NLYSYDIRQLNSPLNVHK-------------------------DMTSAAANEDFNLYSYDIRQLN  108 (198)
Q Consensus        69 ---------------~i~~~d~~~~~~~~~~~~-------------------------~~~~~~~~~~~~i~~~d~~~~~  108 (198)
                                     .|..+|.++.+.......                         ...++.++.+|.++++|.++ +
T Consensus       256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G  334 (668)
T 1kv9_A          256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-G  334 (668)
T ss_dssp             HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-C
T ss_pred             cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-C
Confidence                           388888776654322110                         01477888999999999988 5


Q ss_pred             cceeeecCCC------------cc------------------------eEEEEEccCCCEEEEe----------------
Q psy8758         109 SPLNVHKDMT------------SA------------------------VTSVDYSPTGREFVAG----------------  136 (198)
Q Consensus       109 ~~~~~~~~~~------------~~------------------------i~~~~~sp~~~~l~~~----------------  136 (198)
                      +.+...+...            .+                        -..++++|+...++..                
T Consensus       335 ~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~  414 (668)
T 1kv9_A          335 KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV  414 (668)
T ss_dssp             CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred             CEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence            6553221111            00                        1126788876655431                


Q ss_pred             --------------------ecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         137 --------------------GYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       137 --------------------~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                                          ..++.|.-||+.+++.+.....+  .......+...+.+++.++.|+.++.||.++|+.+
T Consensus       415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l  492 (668)
T 1kv9_A          415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL  492 (668)
T ss_dssp             CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC--CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence                                12378999999999987766332  23333445556778888999999999999999876

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.81  E-value=7.7e-06  Score=56.40  Aligned_cols=177  Identities=2%  Similarity=-0.059  Sum_probs=106.5

Q ss_pred             CceEEEeeCCCeEEEEEccCCcee----eeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--ccc--
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKL----GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNV--   84 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~--   84 (198)
                      |.+|+.+.. +.|+.+++......    ..+... ....+..++|+|++..++.+....+.|..++.......  ...  
T Consensus         1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~   78 (267)
T 1npe_A            1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL   78 (267)
T ss_dssp             CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred             CcEEEEEcC-CeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence            345555554 47888888654321    111111 12346789999988888887667789999998654321  100  


Q ss_pred             ----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCCc
Q psy8758          85 ----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQGH  151 (198)
Q Consensus        85 ----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~~  151 (198)
                                ..+.++++-...+.|..+++.. ................++++|++..|..+..   .+.|..+++....
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~  157 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG-TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN  157 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred             CCccEEEEEecCCeEEEEECCCCEEEEEEcCC-CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence                      1123444555566777777764 2221222222245789999997665555443   3688888876533


Q ss_pred             eeeEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecCCC
Q psy8758         152 SRDIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHAS  193 (198)
Q Consensus       152 ~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~~~  193 (198)
                      . ..+..........++++|++..|+ +-...+.|.++++...
T Consensus       158 ~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~  199 (267)
T 1npe_A          158 R-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP  199 (267)
T ss_dssp             C-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred             c-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence            2 222222235678999999876554 4456789999998754

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.75  E-value=2e-06  Score=65.94  Aligned_cols=56  Identities=13%  Similarity=0.043  Sum_probs=40.4

Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.|..||+.+++.+.....+  ..+........+..++.++.||.++.+|.++|+++
T Consensus       443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l  498 (571)
T 2ad6_A          443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence            478999999999887776332  22222223334566777889999999999999976

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.73  E-value=8e-06  Score=57.93  Aligned_cols=156  Identities=9%  Similarity=0.018  Sum_probs=95.9

Q ss_pred             eeEEEECC-CCceEEEeeC-----------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758           4 VTHTVWSL-DNKFVISASD-----------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         4 v~~~~~s~-~~~~l~~~~~-----------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      .+.+++.+ +|++.++-..                 ++.|..+|..+++.......   ......++|+|+++.++++-.
T Consensus       128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~  204 (322)
T 2fp8_A          128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFVLVAEF  204 (322)
T ss_dssp             EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEEEEEEG
T ss_pred             cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEEEEEeC
Confidence            57789999 8886665322                 36688888765543222221   233568999999998877655


Q ss_pred             CCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-------
Q psy8758          66 EDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-------  138 (198)
Q Consensus        66 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-------  138 (198)
                      ..+.|..+++....                .+..         +....   ... ...+++.++|++.++...       
T Consensus       205 ~~~~I~~~~~~~~~----------------~~~~---------~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~  255 (322)
T 2fp8_A          205 LSHQIVKYWLEGPK----------------KGTA---------EVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMH  255 (322)
T ss_dssp             GGTEEEEEESSSTT----------------TTCE---------EEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTT
T ss_pred             CCCeEEEEECCCCc----------------CCcc---------ceEEe---CCC-CCCeEECCCCCEEEEecCccccccc
Confidence            56788888876421                0001         11111   122 677899999987766544       


Q ss_pred             ---CCcEEEEEcCCCceeeEEeccC---cccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         139 ---DKSLRLYLAHQGHSRDIYHTKR---MQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       139 ---d~~v~v~d~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                         .+.|..+|.. ++.+..+....   ...+..+++ .+++++++...++.|..+++...
T Consensus       256 ~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~  314 (322)
T 2fp8_A          256 GRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK  314 (322)
T ss_dssp             SCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred             CCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence               4668888864 66555553322   234666666 46777777667889999998644

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.72  E-value=2.5e-05  Score=57.01  Aligned_cols=187  Identities=4%  Similarity=-0.052  Sum_probs=112.0

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ....++|++.+..|+.. ...+.|+.+++........+..  .......+++.+.+..|+.+-...+.|.+.++......
T Consensus       117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~  194 (386)
T 3v65_B          117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST--GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK  194 (386)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS--SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred             ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC--CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence            45678999765555544 4667888888865542222211  12235678999877888777666778888887643321


Q ss_pred             cc--------------cccCceEEEecCC-CcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758          82 LN--------------VHKDMTSAAANED-FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL  144 (198)
Q Consensus        82 ~~--------------~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v  144 (198)
                      ..              ...+.++++-... +.|..+++..  .....+ ...-...+.|+++|++..|..+ ...+.|..
T Consensus       195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~  272 (386)
T 3v65_B          195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER  272 (386)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred             EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence            11              0112233333333 5666666653  222222 2333457899999876666554 45678999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|+......... .........+++ .++.++.+-...+.|..++..+|+.
T Consensus       273 ~d~dG~~~~~~~-~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~  321 (386)
T 3v65_B          273 ANLDGSHRKAVI-SQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN  321 (386)
T ss_dssp             ECTTSCSCEEEE-CSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred             EeCCCCeeEEEE-ECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcc
Confidence            998754433333 233345677888 4455556666778898888666654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.69  E-value=6.6e-06  Score=58.38  Aligned_cols=158  Identities=11%  Similarity=0.021  Sum_probs=94.2

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------------------eecCceeeEEeCCCCCeEEEEec
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------------------VMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      ..+++|+++|++++++..++.|..|+..+++. ..+...                  .....+..+++.+++..++++. 
T Consensus        21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d-   98 (322)
T 2fp8_A           21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD-   98 (322)
T ss_dssp             CCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE-
T ss_pred             ceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE-
Confidence            46789999999788888889999998765442 222110                  0012457788887333444432 


Q ss_pred             CCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecC-CCcceEEEEEcc-CCCEEEEeec-----
Q psy8758          66 EDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDYSP-TGREFVAGGY-----  138 (198)
Q Consensus        66 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~sp-~~~~l~~~~~-----  138 (198)
                      ....+..+|.....                   +..+-        ....+ .......+++.| +|++.++...     
T Consensus        99 ~~~~i~~~d~~~g~-------------------~~~~~--------~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~  151 (322)
T 2fp8_A           99 CYYHLSVVGSEGGH-------------------ATQLA--------TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD  151 (322)
T ss_dssp             TTTEEEEECTTCEE-------------------CEEEE--------SEETTEECSCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred             CCCCEEEEeCCCCE-------------------EEEec--------ccCCCCcccccceEEEecCCCEEEEECCcccccc
Confidence            33446666644210                   00000        00000 112367799999 8886666432     


Q ss_pred             ------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         139 ------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       139 ------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                                  ++.|..+|..+++.......  ......++|+|++++|+.+ ..++.|.++++..
T Consensus       152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~  216 (322)
T 2fp8_A          152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG  216 (322)
T ss_dssp             TCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred             cccceehcccCCCceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence                        36788888877765433211  1345678999999865544 5668999999875

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.69  E-value=2.9e-06  Score=66.26  Aligned_cols=180  Identities=13%  Similarity=0.080  Sum_probs=113.8

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecC--------ce-eeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL--------RS-NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      +..+++++.++.|..+|..+++.+-.+.......        .+ ..+.+  .+..+++ ++.|+.+..+|..+.+....
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v-~~~dg~l~alD~~tG~~~W~  142 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYV-GTLDGRLIALDAKTGKAIWS  142 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEE-ECTTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEE-EcCCCEEEEEECCCCCEeee
Confidence            4466777788899999999998765553321100        00 11222  2445555 45789999999876653322


Q ss_pred             ccc----------------CceEEEecC------CCcEEEEEccCCCcceeeecCC---C--------------------
Q psy8758          84 VHK----------------DMTSAAANE------DFNLYSYDIRQLNSPLNVHKDM---T--------------------  118 (198)
Q Consensus        84 ~~~----------------~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~---~--------------------  118 (198)
                      ...                +..++.+..      ++.|..+|.++ ++.+..+...   .                    
T Consensus       143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~  221 (668)
T 1kv9_A          143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADT-GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ  221 (668)
T ss_dssp             EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT-CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred             eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCC-CcEEEEecccCCCCCccccccccccccccCCccc
Confidence            110                122333332      58999999988 6666555321   0                    


Q ss_pred             --------cceEEEEEccCCCEEEEeecCC-------------------cEEEEEcCCCceeeEEecc-Cc-------cc
Q psy8758         119 --------SAVTSVDYSPTGREFVAGGYDK-------------------SLRLYLAHQGHSRDIYHTK-RM-------QH  163 (198)
Q Consensus       119 --------~~i~~~~~sp~~~~l~~~~~d~-------------------~v~v~d~~~~~~~~~~~~~-~~-------~~  163 (198)
                              .....++++|+...++.+..++                   .|.-+|..+++.+..+... |.       .+
T Consensus       222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~  301 (668)
T 1kv9_A          222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ  301 (668)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred             eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence                    0112468888888888877665                   4999999999998877443 21       22


Q ss_pred             EEEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         164 VTHTVWSLDNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       164 v~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..-..+..+|+   .++.++.+|.++++|..+|+.+
T Consensus       302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  337 (668)
T 1kv9_A          302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI  337 (668)
T ss_dssp             EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred             cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence            22233334665   6888999999999999999876

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.64  E-value=2.5e-06  Score=66.48  Aligned_cols=187  Identities=8%  Similarity=0.009  Sum_probs=105.9

Q ss_pred             EEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCC
Q psy8758           6 HTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLN   79 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~   79 (198)
                      ++++.++++.++.|+ .+..+.+||..+.+-. .+........-.+++..++++.++..|..+     ..+.+||..+..
T Consensus       247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~-~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~  325 (656)
T 1k3i_A          247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI-PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  325 (656)
T ss_dssp             EEEECTTSCEEEECSSSTTCEEEEEGGGTEEE-ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             cccCCCCCCEEEeCCCCCCceEEecCcCCcee-ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence            467778999998888 4568999999876432 222111111123455667887776654233     568899986543


Q ss_pred             Ccc---------cc--------ccCceEEEecCC---------CcEEEEEccCCCcceeeecCCC---------cceEEE
Q psy8758          80 SPL---------NV--------HKDMTSAAANED---------FNLYSYDIRQLNSPLNVHKDMT---------SAVTSV  124 (198)
Q Consensus        80 ~~~---------~~--------~~~~~~~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~---------~~i~~~  124 (198)
                      -..         ..        ..+.+++.++.+         ..+..||.... ........+.         ..-.++
T Consensus       326 W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~-~w~~~~~~~~~~~~~~~~~~~~~av  404 (656)
T 1k3i_A          326 WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS-GDVKSAGKRQSNRGVAPDAMCGNAV  404 (656)
T ss_dssp             EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT-CEEEEEEECEETTEECCCCBTCEEE
T ss_pred             ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc-ceeecCCccccccccCCCCCCCceE
Confidence            111         00        222334445443         35677887762 2222221111         123444


Q ss_pred             EEcc-CCCEEEEeecCC-----------cEEEEEcCCCceeeEE--eccCcccEEEEEEcCCCCEEEEecCC--------
Q psy8758         125 DYSP-TGREFVAGGYDK-----------SLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDE--------  182 (198)
Q Consensus       125 ~~sp-~~~~l~~~~~d~-----------~v~v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d--------  182 (198)
                      .|.. +++.++.|+.++           .+.+||..+.......  .......-.++...|++++++.|+.+        
T Consensus       405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~  484 (656)
T 1k3i_A          405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS  484 (656)
T ss_dssp             EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCC
T ss_pred             eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCC
Confidence            4543 677888887542           6778888776654432  11111122345667899999888754        


Q ss_pred             ---CeEEEEecCCCc
Q psy8758         183 ---MNLRVWKAHASE  194 (198)
Q Consensus       183 ---g~v~~w~~~~~~  194 (198)
                         ..+.+||..+.+
T Consensus       485 ~~~~~v~~ydp~t~~  499 (656)
T 1k3i_A          485 TPVFTPEIYVPEQDT  499 (656)
T ss_dssp             SBCCCCEEEEGGGTE
T ss_pred             CcccceEEEcCCCCc
Confidence               468999987654

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.62  E-value=9.3e-06  Score=57.45  Aligned_cols=175  Identities=13%  Similarity=0.070  Sum_probs=106.9

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---   81 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---   81 (198)
                      .++...++++ +..++.++.+..+|.. ++....+..  ....+.++...+++...+.  +  +.+..+| .+....   
T Consensus       140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~d~~g~l~v~--t--~~l~~~d-~~g~~~~~~  210 (330)
T 3hxj_A          140 ATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT--NDAITSAASIGKDGTIYFG--S--DKVYAIN-PDGTEKWNF  210 (330)
T ss_dssp             SCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC--SSCCCSCCEECTTCCEEEE--S--SSEEEEC-TTSCEEEEE
T ss_pred             eeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec--CCCceeeeEEcCCCEEEEE--e--CEEEEEC-CCCcEEEEE
Confidence            4455566666 5557777899999987 654433332  2344667777777765543  3  7788888 432211   


Q ss_pred             ---------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          82 ---------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        82 ---------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                               +....+..+..++.++.+..+|..  +..+..+......+..+.+.+++. |..++.++.+..+|. +++.
T Consensus       211 ~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~  286 (330)
T 3hxj_A          211 YAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD--GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTE  286 (330)
T ss_dssp             CCSSCCCSCCEECTTSCEEEEETTTEEEEECTT--SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCE
T ss_pred             ccCCcceeceEECCCCeEEEEcCCCeEEEECCC--CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcE
Confidence                     111223356677778888888753  455555544444445566666664 556677888999996 6666


Q ss_pred             eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ...+.. ....+.++...++|++++ ++.+|.+++...+..+
T Consensus       287 ~~~~~~-~~~~~~~~~~d~~g~l~~-gt~~G~~~~~~~~~~~  326 (330)
T 3hxj_A          287 KWNFET-GSWIIATPVIDENGTIYF-GTRNGKFYALFNLEHH  326 (330)
T ss_dssp             EEEEEC-SSCCCSCCEECTTCCEEE-ECTTSCEEEEEC----
T ss_pred             EEEEEc-CCccccceEEcCCCEEEE-EcCCCeEEEEeccccc
Confidence            555432 335566777778887554 7789999988776543

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.61  E-value=2.5e-07  Score=66.94  Aligned_cols=92  Identities=5%  Similarity=-0.147  Sum_probs=69.0

Q ss_pred             cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee----------cCCcEEEEEcCCCceeeEEeccC------c
Q psy8758          98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQGHSRDIYHTKR------M  161 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~d~~v~v~d~~~~~~~~~~~~~~------~  161 (198)
                      .+.++|..+ .+.+..+.....+  .+.++||+++++++.          .++.|.+||+.+++....+..+.      .
T Consensus        47 ~vsvID~~t-~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g  123 (368)
T 1mda_H           47 ENWVSCAGC-GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG  123 (368)
T ss_dssp             EEEEEETTT-TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred             eEEEEECCC-CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence            555666655 5777777655555  799999999888876          36889999999999988874331      1


Q ss_pred             ccEEEEEEcCCCCEEEEecC--CCeEEE--EecCC
Q psy8758         162 QHVTHTVWSLDNKFVISASD--EMNLRV--WKAHA  192 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~--dg~v~~--w~~~~  192 (198)
                      .....++++|||++++.+..  ++.+.+  +|+.+
T Consensus       124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t  158 (368)
T 1mda_H          124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD  158 (368)
T ss_dssp             CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred             CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence            23567899999998887754  467888  88865

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.59  E-value=9.4e-06  Score=55.53  Aligned_cols=134  Identities=9%  Similarity=0.099  Sum_probs=87.2

Q ss_pred             CCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCc
Q psy8758          10 SLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDM   88 (198)
Q Consensus        10 s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~   88 (198)
                      .++++.|+... .++.+.+||..+.+....+...   .  ....+++++..++.+ +.++.|.++|..+.          
T Consensus        93 t~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~---~--eG~glt~dg~~L~~S-dGs~~i~~iDp~T~----------  156 (262)
T 3nol_A           93 SDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD---G--EGWGLTHNDQYLIMS-DGTPVLRFLDPESL----------  156 (262)
T ss_dssp             EEETTEEEEEESSSSEEEEEETTTCCEEEEEECS---S--CCCCEEECSSCEEEC-CSSSEEEEECTTTC----------
T ss_pred             EEeCCEEEEEEeeCCEEEEEECccCcEEEEEECC---C--CceEEecCCCEEEEE-CCCCeEEEEcCCCC----------
Confidence            33455555544 5789999999988877666542   2  223344567777765 34677888887653          


Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecC--CC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc----
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKD--MT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK----  159 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~----  159 (198)
                                          +.+..+.-  ..   ..++.+.|. +|+..+..-.++.|.+.|..+++.+..+...    
T Consensus       157 --------------------~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~  215 (262)
T 3nol_A          157 --------------------TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILA  215 (262)
T ss_dssp             --------------------SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGG
T ss_pred             --------------------eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcc
Confidence                                33333321  11   334567776 7776666667889999999999998877332    


Q ss_pred             -------CcccEEEEEEcCCCCEEEEec
Q psy8758         160 -------RMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       160 -------~~~~v~~~~~s~~~~~l~~~~  180 (198)
                             .....+.++|+|+++.|+..+
T Consensus       216 ~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          216 EAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             GSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             ccccccCcCCceEEEEEcCCCCEEEEEC
Confidence                   123568999999877655544

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.57  E-value=6.6e-05  Score=54.01  Aligned_cols=187  Identities=4%  Similarity=-0.046  Sum_probs=111.9

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ....++|++.+..|+.. ...+.|+.+++........+..  .......+++.+.+..++.+-...+.|.+.++......
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~  151 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST--GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK  151 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC--CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence            35788999766555544 4567888888875542222211  12335688998877777777666788988887643321


Q ss_pred             ccc--------------ccCceEEEecCC-CcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758          82 LNV--------------HKDMTSAAANED-FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL  144 (198)
Q Consensus        82 ~~~--------------~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v  144 (198)
                      ...              ..+.++.+-... +.|...++..  .....+ ...-...+.++++|++..|..+ ...+.|..
T Consensus       152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~  229 (349)
T 3v64_C          152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER  229 (349)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence            110              112233343333 5666666653  222222 2233457899999877666554 45678999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|+......... .........+++ .++..+.+-...+.|..++..+|+.
T Consensus       230 ~~~dG~~~~~~~-~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~  278 (349)
T 3v64_C          230 ANLDGSHRKAVI-SQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN  278 (349)
T ss_dssp             EETTSCSCEEEE-CSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred             EeCCCCceEEEE-eCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCc
Confidence            998754433333 233345677888 3455555666678888888656553

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.56  E-value=9.8e-06  Score=62.28  Aligned_cols=56  Identities=14%  Similarity=0.121  Sum_probs=39.9

Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.|.-||+.+++.+.....+  .++..-.....+.+++.++.||.++.||.++|+++
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l  520 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence            578999999999887765332  22222112224567777899999999999999986

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.55  E-value=8.2e-06  Score=62.84  Aligned_cols=56  Identities=13%  Similarity=0.062  Sum_probs=39.0

Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++.+.-||+.+++.+.....+  .+...-.....+.+++.++.|+.++.||.++|+++
T Consensus       452 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l  507 (599)
T 1w6s_A          452 LGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL  507 (599)
T ss_dssp             CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence            467888999998887765322  12221112234567777899999999999999986

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.55  E-value=2.2e-05  Score=53.81  Aligned_cols=132  Identities=6%  Similarity=-0.023  Sum_probs=86.5

Q ss_pred             CCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCce
Q psy8758          11 LDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT   89 (198)
Q Consensus        11 ~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~   89 (198)
                      ++++.|+.. -.++.+.+||..+.+....+...   ..-..++  ++++.++.+ ..++.|.++|..+.           
T Consensus       103 ~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~---~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~-----------  165 (268)
T 3nok_A          103 SDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS---GEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGF-----------  165 (268)
T ss_dssp             ECSSCEEEEESSSCEEEEEETTTTEEEEEEECS---SCCCCEE--EETTEEEEE-CSSSEEEEECTTTC-----------
T ss_pred             EeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC---CceeEEe--cCCCEEEEE-CCCCEEEEEcCCCC-----------
Confidence            344444444 36789999999988877766542   2223443  567888776 45778888887763           


Q ss_pred             EEEecCCCcEEEEEccCCCcceeeecC--CC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc-----
Q psy8758          90 SAAANEDFNLYSYDIRQLNSPLNVHKD--MT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK-----  159 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~-----  159 (198)
                                         +.+..+.-  +.   ..++.+.|. +|+..+..-.++.|.+.|..+++.+..+...     
T Consensus       166 -------------------~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~  225 (268)
T 3nok_A          166 -------------------ALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRA  225 (268)
T ss_dssp             -------------------CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHH
T ss_pred             -------------------eEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCccc
Confidence                               33333321  11   234667776 7776666667889999999999988777322     


Q ss_pred             -------CcccEEEEEEcCCCC-EEEEe
Q psy8758         160 -------RMQHVTHTVWSLDNK-FVISA  179 (198)
Q Consensus       160 -------~~~~v~~~~~s~~~~-~l~~~  179 (198)
                             .....+.++|+|+++ +++||
T Consensus       226 ~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          226 VAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             HTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             ccccccCcCCceEEEEEcCCCCEEEEeC
Confidence                   123678999999765 55555

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.53  E-value=1.7e-05  Score=56.15  Aligned_cols=168  Identities=12%  Similarity=0.022  Sum_probs=102.2

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-----------
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-----------   81 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-----------   81 (198)
                      +..+..++.++.+..+|.. ++.......  ....+.++...+++...+  ++.++.+..+|.. ....           
T Consensus       107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~~~~g~l~v--gt~~~~l~~~d~~-g~~~~~~~~~~~~~~  180 (330)
T 3hxj_A          107 EDILYVTSMDGHLYAINTD-GTEKWRFKT--KKAIYATPIVSEDGTIYV--GSNDNYLYAINPD-GTEKWRFKTNDAITS  180 (330)
T ss_dssp             TTEEEEECTTSEEEEECTT-SCEEEEEEC--SSCCCSCCEECTTSCEEE--ECTTSEEEEECTT-SCEEEEEECSSCCCS
T ss_pred             CCEEEEEecCCEEEEEcCC-CCEEEEEcC--CCceeeeeEEcCCCEEEE--EcCCCEEEEECCC-CCEeEEEecCCCcee
Confidence            3456667778889999987 554333322  233456667777776544  4567888888876 3211           


Q ss_pred             -cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC
Q psy8758          82 -LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR  160 (198)
Q Consensus        82 -~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~  160 (198)
                       .....+..+..++  +.+..+| .+ ++.+.........+.++...++|.. ..++.++.+..+|. +++....+.. .
T Consensus       181 ~~~~d~~g~l~v~t--~~l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~-~  253 (330)
T 3hxj_A          181 AASIGKDGTIYFGS--DKVYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKT-G  253 (330)
T ss_dssp             CCEECTTCCEEEES--SSEEEEC-TT-SCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEEC-S
T ss_pred             eeEEcCCCEEEEEe--CEEEEEC-CC-CcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeC-C
Confidence             1111223344555  8899999 44 5555555555566888888888764 44556778888874 4555444422 2


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      ...+..+...+++. |..++.+|.+..+|. +++.
T Consensus       254 ~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~  286 (330)
T 3hxj_A          254 KRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTE  286 (330)
T ss_dssp             SCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCE
T ss_pred             CCccccceEcCCCe-EEEecCCCCEEEECC-CCcE
Confidence            23334455666665 445667888999986 5554

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.52  E-value=5.2e-05  Score=58.47  Aligned_cols=180  Identities=10%  Similarity=0.003  Sum_probs=110.8

Q ss_pred             ceEEEeeC-CCeEEEEEc-cCCceeeeeeeeeec---------CceeeEEeCCCCCe----EEEEecCCccEEEEeccCC
Q psy8758          14 KFVISASD-EMNLRVWKA-HASEKLGPIRKVVMS---------LRSNMVSWNPMEAF----VFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus        14 ~~l~~~~~-d~~i~i~~~-~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~----~~~~~~~d~~i~~~d~~~~   78 (198)
                      ..+++++. ++.|.-+|. .+++.+-........         .....+++.|.+..    +++ ++.|+.+..+|.++.
T Consensus        63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v-~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK-TQLDGNVAALNAETG  141 (599)
T ss_dssp             TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE-ECTTSEEEEEETTTC
T ss_pred             CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEE-EcCCCEEEEEECCCC
Confidence            45666666 788999999 888866554332110         00123455333333    554 467888988888765


Q ss_pred             CCccccc----------------cCceEEEec------CCCcEEEEEccCCCcceeeecCCCcc----------------
Q psy8758          79 NSPLNVH----------------KDMTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTSA----------------  120 (198)
Q Consensus        79 ~~~~~~~----------------~~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~----------------  120 (198)
                      +......                .+..++.+.      .++.|+.+|.++ ++.+..+......                
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~T-G~~~W~~~~~~~~~~~~~~p~~~~~~~~~  220 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKT-GEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTT-CCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCC-CcEEEEEcCCCCccccccccccccccccc
Confidence            5332210                012344443      379999999998 6666554322110                


Q ss_pred             ----------------------eEEEEEccCCCEEEEeecC----------------CcEEEEEcCCCceeeEEeccCc-
Q psy8758         121 ----------------------VTSVDYSPTGREFVAGGYD----------------KSLRLYLAHQGHSRDIYHTKRM-  161 (198)
Q Consensus       121 ----------------------i~~~~~sp~~~~l~~~~~d----------------~~v~v~d~~~~~~~~~~~~~~~-  161 (198)
                                            -..+++.++...++.+..+                +.|.-+|.++++.+..+...+. 
T Consensus       221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d  300 (599)
T 1w6s_A          221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (599)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence                                  0135667777777766554                3799999999999877744332 


Q ss_pred             --------ccEEEEEEc-CCC---CEEEEecCCCeEEEEecCCCccc
Q psy8758         162 --------QHVTHTVWS-LDN---KFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 --------~~v~~~~~s-~~~---~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                              .++. +... .+|   ..++.++.+|.++++|.++|+.+
T Consensus       301 ~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  346 (599)
T 1w6s_A          301 EWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV  346 (599)
T ss_dssp             SSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             cccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence                    1222 2222 567   46777889999999999999875

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.51  E-value=5.1e-05  Score=51.44  Aligned_cols=132  Identities=6%  Similarity=0.005  Sum_probs=85.0

Q ss_pred             CCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceE
Q psy8758          12 DNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS   90 (198)
Q Consensus        12 ~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~   90 (198)
                      .++.|+.. -.++.+.+||..+.+....+...   ..-..+  .+++..++.+ ..++.|.++|..+.            
T Consensus        73 ~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~---~~Gwgl--t~dg~~L~vS-dgs~~l~~iDp~t~------------  134 (243)
T 3mbr_X           73 WRDRLIQLTWRNHEGFVYDLATLTPRARFRYP---GEGWAL--TSDDSHLYMS-DGTAVIRKLDPDTL------------  134 (243)
T ss_dssp             ETTEEEEEESSSSEEEEEETTTTEEEEEEECS---SCCCEE--EECSSCEEEE-CSSSEEEEECTTTC------------
T ss_pred             eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC---CCceEE--eeCCCEEEEE-CCCCeEEEEeCCCC------------
Confidence            34444444 46789999999888876666542   222344  4567777765 45777888887763            


Q ss_pred             EEecCCCcEEEEEccCCCcceeeecC--CC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc------
Q psy8758          91 AAANEDFNLYSYDIRQLNSPLNVHKD--MT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK------  159 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~~~~~~~~~~--~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~------  159 (198)
                                        +.+..+.-  +.   ..++.+.|. +|+.++..-.+..|.+.|..+++.+..+...      
T Consensus       135 ------------------~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~  195 (243)
T 3mbr_X          135 ------------------QQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDA  195 (243)
T ss_dssp             ------------------CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTT
T ss_pred             ------------------eEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccc
Confidence                              33333321  11   234566665 6776666667889999999999998877322      


Q ss_pred             ------CcccEEEEEEcCCCCEEEEec
Q psy8758         160 ------RMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       160 ------~~~~v~~~~~s~~~~~l~~~~  180 (198)
                            .....+.++++|+++.|...+
T Consensus       196 ~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          196 DALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             TSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             ccccCCcCCceEEEEEcCCCCEEEEEC
Confidence                  123679999999876554433

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.51  E-value=5.5e-05  Score=56.05  Aligned_cols=155  Identities=7%  Similarity=-0.000  Sum_probs=91.2

Q ss_pred             ceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---c-cEEEEecc
Q psy8758           3 HVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---F-NLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~-~i~~~d~~   76 (198)
                      ....++|+|+  +..|+.+...+.|+.++..++.......   .......++|++++. ++++....   . .+...+..
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~---~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~  215 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT---NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA  215 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC---CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec---CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence            3468999985  3445444443789999987765433222   234468999999999 55543211   1 11112111


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEcCCCce-ee
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHS-RD  154 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~~~~~~-~~  154 (198)
                      ..                             ......+. .......++++| +|.++++-..++.|+.+|..++.. ..
T Consensus       216 ~~-----------------------------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~  265 (433)
T 4hw6_A          216 SG-----------------------------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE  265 (433)
T ss_dssp             GT-----------------------------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE
T ss_pred             CC-----------------------------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE
Confidence            00                             00001111 123346789999 676666666778999999987766 22


Q ss_pred             EEeccCcccEEEEEEcCCCCEE-EEecCCCeEEEEecC
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFV-ISASDEMNLRVWKAH  191 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~  191 (198)
                      ....+....-..++|+|++++| ++-...+.|+.++++
T Consensus       266 ~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          266 EVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             EEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             EeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            2222222334579999999854 444567889998765

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.45  E-value=0.00017  Score=52.67  Aligned_cols=166  Identities=7%  Similarity=-0.036  Sum_probs=101.9

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-c-------------ccccC
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-L-------------NVHKD   87 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~-------------~~~~~   87 (198)
                      ...|+..++........+.   ....+..++|++.+..|+.+-...+.|..++....... +             ....+
T Consensus        95 ~~~I~~i~~~~~~~~~~~~---~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g  171 (386)
T 3v65_B           95 RIDIRQVLPHRSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD  171 (386)
T ss_dssp             BSCEEEECTTSCCCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred             CccceeeccCCCcEEEEec---CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence            3568888876554322222   23456889999988888877666788988887644211 1             01122


Q ss_pred             ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cC-CcEEEEEcCCCceeeEEeccCcccEE
Q psy8758          88 MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YD-KSLRLYLAHQGHSRDIYHTKRMQHVT  165 (198)
Q Consensus        88 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d-~~v~v~d~~~~~~~~~~~~~~~~~v~  165 (198)
                      .++++-...+.|.+.++.. ......+.........++++|.+..|..+. .. +.|..+++......... ........
T Consensus       172 ~lY~~d~~~~~I~~~~~dg-~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~~~~Pn  249 (386)
T 3v65_B          172 KLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTHLFWPN  249 (386)
T ss_dssp             EEEEEETTTTEEEECBTTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSCEE
T ss_pred             eEEEEcCCCCeEEEEeCCC-CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECCCCCee
Confidence            3444445556666666654 222222333335678999999777665554 34 67888888754443333 23335678


Q ss_pred             EEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         166 HTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       166 ~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      .++|+|++..|+.+ +..+.|..++++.
T Consensus       250 Glavd~~~~~lY~aD~~~~~I~~~d~dG  277 (386)
T 3v65_B          250 GLTIDYAGRRMYWVDAKHHVIERANLDG  277 (386)
T ss_dssp             EEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred             eEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence            99999876655544 5667899998864

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.43  E-value=6e-05  Score=55.84  Aligned_cols=174  Identities=9%  Similarity=0.069  Sum_probs=100.6

Q ss_pred             eeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ...++++| +|.+.++-..++.|+.++..++.....+...........++|+|+++.|+++-...+.|+.++.......+
T Consensus       230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~  309 (433)
T 4hw6_A          230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL  309 (433)
T ss_dssp             BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred             CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence            35688898 66665555567789999987665423332221122234699999999787776667888888765321111


Q ss_pred             ccccCceEEEec--CCCcEEEEEccCCCcceeeecCCCcceEEEEE---------ccCCCEEEEeecCCcEEEEEcCCCc
Q psy8758          83 NVHKDMTSAAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY---------SPTGREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus        83 ~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~---------sp~~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                      .   ....+.+.  ..+..   |    +..   ....-.....+++         .++|.++++-...+.|+.++. ++.
T Consensus       310 ~---~~~~~ag~~g~~g~~---d----g~~---~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~  375 (433)
T 4hw6_A          310 A---VPYIVCGQHSSPGWV---D----GMG---TGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR  375 (433)
T ss_dssp             C---CCEEEEECTTCCCCB---C----EEG---GGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred             C---cEEEEEecCCCCccC---C----Ccc---cceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence            0   01111221  11100   0    000   0011223567888         677777777777788999985 454


Q ss_pred             eeeEEecc----------------CcccEEEEEEc-CCCCEEEEecCCCeEEEEecC
Q psy8758         152 SRDIYHTK----------------RMQHVTHTVWS-LDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       152 ~~~~~~~~----------------~~~~v~~~~~s-~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .....-.+                .-.....++++ ++|.++++=..++.|+..+++
T Consensus       376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            43332111                01247889999 677776666677888888764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.43  E-value=0.00017  Score=51.84  Aligned_cols=181  Identities=7%  Similarity=-0.033  Sum_probs=107.5

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc--
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL--   82 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~--   82 (198)
                      +|.+..+++ +|+.+ ....|+..++........+.   ....+..++|++.+..|+.+-...+.|..++........  
T Consensus        37 ~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~---~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~  111 (349)
T 3v64_C           37 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV  111 (349)
T ss_dssp             CEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred             cccccccCc-eeEee-cccceEEEeCCCCeeEEeec---CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence            344444533 33333 33457777776544322222   233468899999888888876667889888876543211  


Q ss_pred             c------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cC-CcEEEEEcC
Q psy8758          83 N------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YD-KSLRLYLAH  148 (198)
Q Consensus        83 ~------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d-~~v~v~d~~  148 (198)
                      .            ...+.++++-...+.|.+.++.. ......+...-.....++++|.+..|.... .. +.|..+++.
T Consensus       112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d  190 (349)
T 3v64_C          112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  190 (349)
T ss_dssp             CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC-CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence            0            01223445555566777777764 222222333335578999999766555443 44 788888887


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      ........ .........++++|++..|+.+ ...+.|..++++.
T Consensus       191 G~~~~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG  234 (349)
T 3v64_C          191 GSGRRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  234 (349)
T ss_dssp             SCSCEESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCCcEEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence            54333222 2223567899999876655544 5567899998864

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.42  E-value=0.00015  Score=50.97  Aligned_cols=174  Identities=10%  Similarity=0.081  Sum_probs=99.2

Q ss_pred             ceeEEEECCCCceEEEeeC-C-CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758           3 HVTHTVWSLDNKFVISASD-E-MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~-d-~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-   79 (198)
                      ....+++.++|+++++... + ..|..++..+++.. .+...........++..+++ .++++...++.|+.+|..... 
T Consensus        73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~-~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~  150 (306)
T 2p4o_A           73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE-TLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSG  150 (306)
T ss_dssp             EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE-EEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEE
T ss_pred             CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE-EEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcE
Confidence            4678999999996555433 2 24666676666532 22221111222344444444 444444457888888875321 


Q ss_pred             ------------C---c------cccccCceEEEecCCCcEEEEEccCCCcc--eeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          80 ------------S---P------LNVHKDMTSAAANEDFNLYSYDIRQLNSP--LNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        80 ------------~---~------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                                  .   .      +......++++-...+.|..+++...+..  ...+.. ......++++++|+++++.
T Consensus       151 ~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~  229 (306)
T 2p4o_A          151 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGAT  229 (306)
T ss_dssp             EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEEC
T ss_pred             eEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEe
Confidence                        0   0      00011235566667788889988641111  112211 1235678999999987777


Q ss_pred             ecCCcEEEEEcCCCceeeEEe-ccCcccEEEEEEc---CCCCEEEEec
Q psy8758         137 GYDKSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWS---LDNKFVISAS  180 (198)
Q Consensus       137 ~~d~~v~v~d~~~~~~~~~~~-~~~~~~v~~~~~s---~~~~~l~~~~  180 (198)
                      ...+.|.++|.. ++...... ........+++|.   |+++.|+..+
T Consensus       230 ~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~  276 (306)
T 2p4o_A          230 HIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT  276 (306)
T ss_dssp             BTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred             CCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence            778899999975 55433211 1222568999998   8877665443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.41  E-value=5.1e-05  Score=56.89  Aligned_cols=161  Identities=6%  Similarity=0.039  Sum_probs=91.6

Q ss_pred             eeEEEECCC-CceEEEe-eCCCeEEEEEccCCceeeeeeeee-ecCceeeEEe-------CCCCCeEEEEecCCcc----
Q psy8758           4 VTHTVWSLD-NKFVISA-SDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSW-------NPMEAFVFTAANEDFN----   69 (198)
Q Consensus         4 v~~~~~s~~-~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~~~~~~~~~d~~----   69 (198)
                      ...|+|+|. ...|+.+ ...+.|++.|+.++.....+.... .......++|       ++++..++++...++.    
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~  220 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES  220 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence            467899983 4444444 344678888887665332222110 1224688999       9999977776433322    


Q ss_pred             --EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCc-c-eeeecCCCcceEEEEEccCC-CEEEEeecCCcEEE
Q psy8758          70 --LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNS-P-LNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRL  144 (198)
Q Consensus        70 --i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~-~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v  144 (198)
                        +.+++...                  ++.+        .. . ...+... .....++++|++ .++++-..++.|..
T Consensus       221 ~~V~~i~r~~------------------~G~~--------~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r  273 (496)
T 3kya_A          221 PSVYIIKRNA------------------DGTF--------DDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFR  273 (496)
T ss_dssp             EEEEEEECCT------------------TSCC--------STTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred             ceEEEEecCC------------------CCce--------eecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEE
Confidence              44444221                  0000        00 0 0111111 234578899954 45556667788999


Q ss_pred             EEcC-------CCce-----------e-eEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758         145 YLAH-------QGHS-----------R-DIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH  191 (198)
Q Consensus       145 ~d~~-------~~~~-----------~-~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~  191 (198)
                      +|+.       ++..           . ..+..+.......++|+|+|++|+ +-+....|+.++..
T Consensus       274 ~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d  340 (496)
T 3kya_A          274 LDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD  340 (496)
T ss_dssp             ECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             EecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence            9997       5543           1 122223334568999999999544 44567788886653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.40  E-value=0.00019  Score=50.88  Aligned_cols=171  Identities=7%  Similarity=-0.043  Sum_probs=103.2

Q ss_pred             EEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC----CC-Cc-ccc-----
Q psy8758          16 VISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ----LN-SP-LNV-----   84 (198)
Q Consensus        16 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~----~~-~~-~~~-----   84 (198)
                      |+.+. ...|+..|+...+....+..   ...+..++|++.+..++.+-...+.|..+++..    .. .. +..     
T Consensus         4 ll~~~-~~~I~~i~~~~~~~~~~~~~---~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p   79 (316)
T 1ijq_A            4 LFFTN-RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP   79 (316)
T ss_dssp             EEEEC-BSSEEEEETTSCCCEEEECS---CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             EEEEC-CCeEEEEECCCcceEehhcC---CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence            34333 34688899987654333322   345678999998888888766678899998764    11 11 110     


Q ss_pred             -------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-C-CcEEEEEcCCCceeeE
Q psy8758          85 -------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-D-KSLRLYLAHQGHSRDI  155 (198)
Q Consensus        85 -------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d-~~v~v~d~~~~~~~~~  155 (198)
                             ..+.++++-...+.|.+.++.. ......+.........++++|.+..|..+.. . +.|..+++........
T Consensus        80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~  158 (316)
T 1ijq_A           80 DGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL  158 (316)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred             CEEEEeecCCeEEEEECCCCEEEEEeCCC-CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE
Confidence                   1122344445566677777664 2222222323356789999997776655543 2 6888888864433222


Q ss_pred             EeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         156 YHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       156 ~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      . ...-.....++++|++..|+.+ +..+.|..+|++.
T Consensus       159 ~-~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg  195 (316)
T 1ijq_A          159 V-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  195 (316)
T ss_dssp             E-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             E-ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence            2 2233568899999987666544 5567899999864

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.39  E-value=0.0002  Score=51.12  Aligned_cols=178  Identities=11%  Similarity=0.164  Sum_probs=108.1

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC----CC---eEEEEecC--CccEEEEecc--CCC--
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM----EA---FVFTAANE--DFNLYSYDIR--QLN--   79 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~~~~~~~~--d~~i~~~d~~--~~~--   79 (198)
                      ..+++.....+.+.+||+ +++.+..+.    .+.++.+..-|.    ++   .++++...  ++++.+|++.  +..  
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~----~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~  114 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSYN----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEEC----CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEcc----CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence            345666667889999999 677655543    244556655552    22   23444333  5789999663  110  


Q ss_pred             ---C---ccc--------------cccC-ceEEEecCCCcEEEEEccCC------CcceeeecCCCcceEEEEEccCCCE
Q psy8758          80 ---S---PLN--------------VHKD-MTSAAANEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGRE  132 (198)
Q Consensus        80 ---~---~~~--------------~~~~-~~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~sp~~~~  132 (198)
                         .   ++.              ...+ .++++...++.+..|++...      .+.++.+.- ...+..+...+....
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~  193 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR  193 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred             eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence               0   100              0011 24666677788888888431      234455543 456888999998889


Q ss_pred             EEEeecCCcEEEEEcC-----CCceeeEEeccC-cccEEEEEE--cCCCC-EEEEec-CCCeEEEEecC-CCccc
Q psy8758         133 FVAGGYDKSLRLYLAH-----QGHSRDIYHTKR-MQHVTHTVW--SLDNK-FVISAS-DEMNLRVWKAH-ASEKL  196 (198)
Q Consensus       133 l~~~~~d~~v~v~d~~-----~~~~~~~~~~~~-~~~v~~~~~--s~~~~-~l~~~~-~dg~v~~w~~~-~~~~~  196 (198)
                      |..+-++.-|..|+.+     +++.+..+..++ ...+..|++  .++++ +|++++ .++.+.+||.+ +.+.+
T Consensus       194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v  268 (355)
T 3amr_A          194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV  268 (355)
T ss_dssp             EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred             EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence            9999988777777755     233443321222 246888888  45555 555554 67899999996 44443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.39  E-value=0.00019  Score=50.81  Aligned_cols=189  Identities=5%  Similarity=-0.054  Sum_probs=109.9

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCC---ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS---EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      ...+++|++.+..|+.. ...+.|..+++...   .....+.. ..-.....+++.+.+..++.+-...+.|.+.+....
T Consensus        31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~  109 (316)
T 1ijq_A           31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (316)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe-CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence            45688999876555544 45688999988651   21122211 111345788998877777776566788998887643


Q ss_pred             CCc--cc----------c--ccCceEEEecCC-CcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee-cCCc
Q psy8758          79 NSP--LN----------V--HKDMTSAAANED-FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-YDKS  141 (198)
Q Consensus        79 ~~~--~~----------~--~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~-~d~~  141 (198)
                      ...  ..          .  ..+.++++.... +.|...++..  .....+ ...-...+.++++|++..|..+. ..+.
T Consensus       110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~  187 (316)
T 1ijq_A          110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS  187 (316)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence            211  11          0  112233333222 5666666653  333333 22334578999999877665554 5678


Q ss_pred             EEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         142 LRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |..+|+........... ........+++. .+.++.+-...+.|..++..+|+.
T Consensus       188 I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~  241 (316)
T 1ijq_A          188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD  241 (316)
T ss_dssp             EEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred             EEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence            99999975433332221 122346677875 355555666778899998877664

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.37  E-value=8.3e-05  Score=58.96  Aligned_cols=156  Identities=10%  Similarity=0.017  Sum_probs=80.9

Q ss_pred             eEEEECCCCceEEEeeCC-----CeEEEEEccCCceee-eeeeeeecCceeeEEeCCCCCeEEEEecC--CccEEEEecc
Q psy8758           5 THTVWSLDNKFVISASDE-----MNLRVWKAHASEKLG-PIRKVVMSLRSNMVSWNPMEAFVFTAANE--DFNLYSYDIR   76 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~   76 (198)
                      ..++|+|||+.|+....+     ..|.++++.++.... .+...........+.|+||+++|+.+...  ...|+++|+.
T Consensus       224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~  303 (751)
T 2xe4_A          224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR  303 (751)
T ss_dssp             SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred             eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence            468899999877776654     257778887654221 12111122345678899999998876532  2234444443


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcce--eee-cCCCcceEEEEEccCCCEEEEeecC----CcEEEEEcCC
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPL--NVH-KDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQ  149 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~-~~~~~~i~~~~~sp~~~~l~~~~~d----~~v~v~d~~~  149 (198)
                                                   +.....  ..+ ........++.|+..+.+++....+    ..|..+++.+
T Consensus       304 -----------------------------~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          304 -----------------------------KGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             -----------------------------SCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred             -----------------------------CCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence                                         311112  222 2233444555554444444444443    3566777765


Q ss_pred             C-ceee-EEeccCcccEEEEEEcCCCCEEEEecCCCe--EEEEec
Q psy8758         150 G-HSRD-IYHTKRMQHVTHTVWSLDNKFVISASDEMN--LRVWKA  190 (198)
Q Consensus       150 ~-~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--v~~w~~  190 (198)
                      + .... .+.......+..+.+. .+.++++...++.  ++++++
T Consensus       355 ~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          355 PSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             TTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred             cccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence            2 3233 3312212245555554 2334555666775  455554

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.33  E-value=0.00028  Score=49.98  Aligned_cols=168  Identities=8%  Similarity=0.100  Sum_probs=97.5

Q ss_pred             eEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeee-------cCceeeEEe---CCCCCeEEEEecCCccEEEE
Q psy8758           5 THTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVM-------SLRSNMVSW---NPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~~~~~~~~d~~i~~~   73 (198)
                      .+++|.+....++.++ ..+.|..|+...+.....  ....       ...+..+.|   .|+++.++++ ....   -|
T Consensus        16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~--~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~-~~~~---af   89 (334)
T 2p9w_A           16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV--VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM-KNAK---SF   89 (334)
T ss_dssp             SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE--CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE-EETT---TT
T ss_pred             cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE--ecCCccccCCCcceeeEEEEeccCCCCcEEEEE-cccc---cc
Confidence            4678987555565555 789999999875543222  1111       113478889   6875555432 2100   00


Q ss_pred             eccCCCCccccccCceEEEecCCCcEEEEEcc---CCCcceeeec--C-----------CCcceEEEEEccCCCEEEEee
Q psy8758          74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIR---QLNSPLNVHK--D-----------MTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~~~~~--~-----------~~~~i~~~~~sp~~~~l~~~~  137 (198)
                      +....         .    -+.+..+..+|+.   + ++.+....  .           .......|+..++|+..++++
T Consensus        90 ~~~g~---------~----~~g~~~v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s  155 (334)
T 2p9w_A           90 NFADQ---------S----SHGASSFHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA  155 (334)
T ss_dssp             CTTSC---------C----SSSCCEEEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred             ccccc---------c----cCCCCEEEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence            00000         0    0123344455554   3 23332221  1           123488999999999999888


Q ss_pred             cC-CcEEEEEcCCCceeeEEecc----CcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         138 YD-KSLRLYLAHQGHSRDIYHTK----RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       138 ~d-~~v~v~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      .- +.|...+.............    .....+.++++|+|+.|++....|.+..+|+.+
T Consensus       156 ~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          156 LGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             ESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             CCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            87 88877777654332222111    112367899999999888776699999999874

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.29  E-value=0.00044  Score=50.72  Aligned_cols=191  Identities=5%  Similarity=-0.063  Sum_probs=110.5

Q ss_pred             cceeEEEECCCCceEEEee-CCCeEEEEEccCCc---eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASE---KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.+.+++|++.+..|+... ..+.|+.+++....   ....+.. ........+++.+.+..|+.+-...+.|.+.++..
T Consensus       112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g  190 (400)
T 3p5b_L          112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  190 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred             CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence            4567899998666555543 56788888876421   1111211 11234578889887777777766678888888764


Q ss_pred             CCCccc--------------cccCceEEEec-CCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee-cCC
Q psy8758          78 LNSPLN--------------VHKDMTSAAAN-EDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-YDK  140 (198)
Q Consensus        78 ~~~~~~--------------~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~-~d~  140 (198)
                      ......              ...+.++.+-. ..+.|...++..  .....+ ...-...+.|+++|++..|..+. ..+
T Consensus       191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~  268 (400)
T 3p5b_L          191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH  268 (400)
T ss_dssp             CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence            332111              11122333322 235666666653  222222 33335678999999877666654 467


Q ss_pred             cEEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .|..+|+........... .......++++. .+.++.+-...+.|..+|..+|+.+
T Consensus       269 ~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~  324 (400)
T 3p5b_L          269 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV  324 (400)
T ss_dssp             EEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred             EEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCce
Confidence            899999876544333321 122345677773 3445555566788998887777543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.28  E-value=0.00067  Score=52.26  Aligned_cols=177  Identities=11%  Similarity=0.029  Sum_probs=104.0

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeeecCc-------eeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc---
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSLR-------SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV---   84 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~---   84 (198)
                      .+++++.++.|.-+|..+++.+-.+........       ...+..  .+..+++ ++.++.+..+|.++.+.....   
T Consensus        70 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~-~t~dg~l~AlD~~TG~~~W~~~~~  146 (582)
T 1flg_A           70 VIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFF-GTLDASVVALNKNTGKVVWKKKFA  146 (582)
T ss_dssp             EEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEE-EETTTEEEEEESSSCCEEEEEECS
T ss_pred             EEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEE-EeCCCEEEEEECCCCCEEeeecCC
Confidence            455555544588899999987655543211100       011222  2445554 457888888887665432110   


Q ss_pred             --------------ccC-----ceEEEec------CCCcEEEEEccCCCcceeeecCCCc--------------------
Q psy8758          85 --------------HKD-----MTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTS--------------------  119 (198)
Q Consensus        85 --------------~~~-----~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~--------------------  119 (198)
                                    ..+     ..++.+.      .++.|..+|.++ ++.+........                    
T Consensus       147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t-G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~  225 (582)
T 1flg_A          147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT-GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS  225 (582)
T ss_dssp             CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT-CCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred             CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC-CCEEeecCCCccccccccCccccccccccccc
Confidence                          011     0344443      378899999887 555544322100                    


Q ss_pred             ---------------------ceEEEEEccCCCEEEEeec--------------------C----CcEEEEEcCCCceee
Q psy8758         120 ---------------------AVTSVDYSPTGREFVAGGY--------------------D----KSLRLYLAHQGHSRD  154 (198)
Q Consensus       120 ---------------------~i~~~~~sp~~~~l~~~~~--------------------d----~~v~v~d~~~~~~~~  154 (198)
                                           .-..++++|+...++.+..                    |    +.|.-+|..+++.+.
T Consensus       226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W  305 (582)
T 1flg_A          226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW  305 (582)
T ss_dssp             SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred             CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence                                 0123567777666665542                    2    579999999999988


Q ss_pred             EEecc-Cc--------ccEEEEEEc-CCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         155 IYHTK-RM--------QHVTHTVWS-LDNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       155 ~~~~~-~~--------~~v~~~~~s-~~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+... |.        .++. +... .+|+   .++.++.+|.++++|.++|+.+
T Consensus       306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  359 (582)
T 1flg_A          306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ  359 (582)
T ss_dssp             EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence            77433 21        1221 1222 4674   6788899999999999999876

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.27  E-value=6.2e-05  Score=58.76  Aligned_cols=185  Identities=10%  Similarity=0.020  Sum_probs=100.3

Q ss_pred             EEEECC-CCceEEEeeCCC-----------eEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEEecCCccEE
Q psy8758           6 HTVWSL-DNKFVISASDEM-----------NLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTAANEDFNLY   71 (198)
Q Consensus         6 ~~~~s~-~~~~l~~~~~d~-----------~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~   71 (198)
                      .+++.+ +++.++.|+.+.           .+.+||..+++... +....  ......++++.++++.+++.|..+..+.
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~-~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~  268 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD-RTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS  268 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC-CEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe-CcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence            556677 888888886542           57889988765322 22111  1222234677888887777554567899


Q ss_pred             EEeccCCCC-------------ccccc-cCceEEEec-CC-----CcEEEEEccCCCcceeeecC-----CCcceEEEEE
Q psy8758          72 SYDIRQLNS-------------PLNVH-KDMTSAAAN-ED-----FNLYSYDIRQLNSPLNVHKD-----MTSAVTSVDY  126 (198)
Q Consensus        72 ~~d~~~~~~-------------~~~~~-~~~~~~~~~-~~-----~~i~~~d~~~~~~~~~~~~~-----~~~~i~~~~~  126 (198)
                      +||..+..-             ..... .+.+++.|+ .+     ..+.+||..+ ..-. .+..     ....-....+
T Consensus       269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t-~~W~-~~~~~~~~p~~~~~~~~~~  346 (656)
T 1k3i_A          269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS-KTWT-SLPNAKVNPMLTADKQGLY  346 (656)
T ss_dssp             EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT-TEEE-EETTSCSGGGCCCCTTGGG
T ss_pred             EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC-Ccce-eCCCcccccccccccccee
Confidence            999864320             01112 445667776 34     5688999876 2221 1110     0000001123


Q ss_pred             ccCCCEEEEeecC---------CcEEEEEcCCCceeeEEeccC--------cccEEEEEEcC-CCCEEEEecCCC-----
Q psy8758         127 SPTGREFVAGGYD---------KSLRLYLAHQGHSRDIYHTKR--------MQHVTHTVWSL-DNKFVISASDEM-----  183 (198)
Q Consensus       127 sp~~~~l~~~~~d---------~~v~v~d~~~~~~~~~~~~~~--------~~~v~~~~~s~-~~~~l~~~~~dg-----  183 (198)
                      ..+++.++.++.+         ..+..||..+...........        ...-.++.|.. ++++++.|+.++     
T Consensus       347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~  426 (656)
T 1k3i_A          347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD  426 (656)
T ss_dssp             TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred             ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence            3455555555544         356788888765433221110        01223444543 677777777432     


Q ss_pred             ------eEEEEecCCC
Q psy8758         184 ------NLRVWKAHAS  193 (198)
Q Consensus       184 ------~v~~w~~~~~  193 (198)
                            .+.+||..+.
T Consensus       427 ~~~~~~~v~~yd~~~~  442 (656)
T 1k3i_A          427 ATTNAHIITLGEPGTS  442 (656)
T ss_dssp             CCCCEEEEECCSTTSC
T ss_pred             cCCcceEEEcCCCCCC
Confidence                  6778887654

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.27  E-value=0.0004  Score=49.27  Aligned_cols=188  Identities=5%  Similarity=-0.048  Sum_probs=111.6

Q ss_pred             ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+++|.+.+..|+ +-...+.|+.+++..+.....+... .-.....+++.+.+..++.+-...+.|.++++......
T Consensus        36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~  114 (318)
T 3sov_A           36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK  114 (318)
T ss_dssp             EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence            356788888555444 4446678888888655322222211 12345688998877777776666788999987643321


Q ss_pred             cc--------------cccCceEEEe-cCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758          82 LN--------------VHKDMTSAAA-NEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL  144 (198)
Q Consensus        82 ~~--------------~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v  144 (198)
                      ..              ...+.++.+- +..+.|...++..  .....+ ...-...+.++++|++..|..+ +..+.|..
T Consensus       115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~  192 (318)
T 3sov_A          115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK  192 (318)
T ss_dssp             EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC--CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence            11              0112223332 2346677777653  222222 2233456899999977766555 45678999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|+......... .+.......+++.. +.++.+-...+.|..++..+|+.
T Consensus       193 ~d~dG~~~~~~~-~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~  241 (318)
T 3sov_A          193 SNLDGTNRQAVV-KGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG  241 (318)
T ss_dssp             EETTSCSCEEEE-CSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred             EcCCCCceEEEe-cCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence            998754433333 33335567777753 34455556678899999877764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.26  E-value=3e-05  Score=60.89  Aligned_cols=189  Identities=7%  Similarity=-0.052  Sum_probs=102.9

Q ss_pred             ceeEEEECCCCceEEEee-CCCeEEEEEccC----CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHA----SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .+.+++|++.+..|+... ..+.|+.+++..    ......+..  .......+++.+.+..|+.+-...+.|.++++..
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~--~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg  484 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  484 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS--CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC--CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence            456788988766665553 557888888864    121111111  1123457888876666766545567888888764


Q ss_pred             CCCccc------------c--ccCceEEEecC-CCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEE-EeecCC
Q psy8758          78 LNSPLN------------V--HKDMTSAAANE-DFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFV-AGGYDK  140 (198)
Q Consensus        78 ~~~~~~------------~--~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~-~~~~d~  140 (198)
                      ......            .  ..+.++++-.. .+.|..+++..  .....+ ...-...+.|+|+|++..|+ +-...+
T Consensus       485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~  562 (699)
T 1n7d_A          485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH  562 (699)
T ss_dssp             CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred             CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCC
Confidence            321110            0  11122333222 25666666543  222222 22233467899999866554 445567


Q ss_pred             cEEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .|..+++........+.. ........|++..+ .++++....+.|..++..+|+.+
T Consensus       563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~  618 (699)
T 1n7d_A          563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV  618 (699)
T ss_dssp             EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred             eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCce
Confidence            899999875433322211 11123345566544 44445566788999988776643

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.23  E-value=0.00039  Score=47.62  Aligned_cols=186  Identities=11%  Similarity=0.168  Sum_probs=106.7

Q ss_pred             cceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.+..++|+|++..|+ +...++.|...|.. ++..+.+.. ......-.+++.+++.++++ ...++.+.++++.....
T Consensus        27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs-~E~~~~l~~~~v~~~~~  103 (255)
T 3qqz_A           27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-DFVKDLETIEYIGDNQFVIS-DERDYAIYVISLTPNSE  103 (255)
T ss_dssp             SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-SSCSSEEEEEECSTTEEEEE-ETTTTEEEEEEECTTCC
T ss_pred             cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-CCCCChHHeEEeCCCEEEEE-ECCCCcEEEEEcCCCCe
Confidence            4578999999776554 56677888888886 665554432 11235678888888765544 34567788777653321


Q ss_pred             ---------cc---cccc----------CceEEEecCCCcEEEEEccC--CCcceeeec-------CCCcceEEEEEccC
Q psy8758          81 ---------PL---NVHK----------DMTSAAANEDFNLYSYDIRQ--LNSPLNVHK-------DMTSAVTSVDYSPT  129 (198)
Q Consensus        81 ---------~~---~~~~----------~~~~~~~~~~~~i~~~d~~~--~~~~~~~~~-------~~~~~i~~~~~sp~  129 (198)
                               .+   ....          ...+.++.+.....+|....  ....+....       .+...+..++++|.
T Consensus       104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~  183 (255)
T 3qqz_A          104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ  183 (255)
T ss_dssp             EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred             eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence                     01   0000          01233333333333333321  011122211       12335789999996


Q ss_pred             -CCEEEEeecCCcEEEEEcCCCceeeEEecc--C------cccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         130 -GREFVAGGYDKSLRLYLAHQGHSRDIYHTK--R------MQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       130 -~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~--~------~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                       +++++.+.....+.++|... +.+..+.-.  .      -.....++|.++|+++++ ++-+.++.+.-..
T Consensus       184 tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~~  253 (255)
T 3qqz_A          184 KNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQS  253 (255)
T ss_dssp             TTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC--
T ss_pred             CCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEecC
Confidence             45666777788899999764 444444211  1      136789999999985554 6777777776543

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.19  E-value=0.00095  Score=51.29  Aligned_cols=178  Identities=11%  Similarity=0.014  Sum_probs=106.6

Q ss_pred             ceEEEeeC-CCeEEEEEc-cCCceeeeeeeeeecCc---------eeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758          14 KFVISASD-EMNLRVWKA-HASEKLGPIRKVVMSLR---------SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus        14 ~~l~~~~~-d~~i~i~~~-~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ..++.++. ++.|.-+|. .+++.+-..........         ...+..  .+..+++ ++.|+.+..+|.++.+...
T Consensus        63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v-~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVK-KQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEE-ECTTSEEEEEETTTCCEEE
T ss_pred             CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEE-EeCCCEEEEEECCCCCEEE
Confidence            35666666 788999999 88886655432211000         011222  2455555 4578889888887654322


Q ss_pred             cc-----------c-----cCceEEEecC------CCcEEEEEccCCCcceeeecCCCcc--------------------
Q psy8758          83 NV-----------H-----KDMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMTSA--------------------  120 (198)
Q Consensus        83 ~~-----------~-----~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~--------------------  120 (198)
                      ..           .     .+..++.+..      ++.|..+|.++ ++.+..+......                    
T Consensus       140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~  218 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT-GELKWRAFATGSDDSVRLAKDFNSANPHYGQFG  218 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT-CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSS
T ss_pred             EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCC-CcEEEEEccCCCccccccCcccccccccccccc
Confidence            11           0     0123444443      78999999988 6666554322110                    


Q ss_pred             ------------------eEEEEEccCCCEEEEeecC----------------CcEEEEEcCCCceeeEEeccC------
Q psy8758         121 ------------------VTSVDYSPTGREFVAGGYD----------------KSLRLYLAHQGHSRDIYHTKR------  160 (198)
Q Consensus       121 ------------------i~~~~~sp~~~~l~~~~~d----------------~~v~v~d~~~~~~~~~~~~~~------  160 (198)
                                        ...+++.|+...+..+..+                +.|..+|..+++.+..+...+      
T Consensus       219 ~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~  298 (571)
T 2ad6_A          219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDF  298 (571)
T ss_dssp             HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCC
T ss_pred             cccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccc
Confidence                              0235677766666655432                359999999999887764322      


Q ss_pred             ---cccEEEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         161 ---MQHVTHTVWSLDNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       161 ---~~~v~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                         ..++. +...++|+   .++.++.+|.++++|..+|+.+
T Consensus       299 ~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~  339 (571)
T 2ad6_A          299 AGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI  339 (571)
T ss_dssp             CCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence               12221 22234774   5677888999999999999875

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.19  E-value=0.00078  Score=49.38  Aligned_cols=173  Identities=7%  Similarity=-0.038  Sum_probs=105.2

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-----Ccc-c-----
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-----SPL-N-----   83 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-----~~~-~-----   83 (198)
                      +|+.+ ....|+..++........+.   ....+..++|++.+..|+.+-...+.|+.+++....     ..+ .     
T Consensus        85 ~ll~~-~~~~I~~i~l~~~~~~~~~~---~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~  160 (400)
T 3p5b_L           85 YLFFT-NRHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA  160 (400)
T ss_dssp             EEEEE-ETTEEEEECTTSCSCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred             eeEEe-ccceeEEEccCCcceeEecc---ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence            34433 34678888887654333222   234578999999888888876667888888876411     111 1     


Q ss_pred             -------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec--CCcEEEEEcCCCceee
Q psy8758          84 -------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY--DKSLRLYLAHQGHSRD  154 (198)
Q Consensus        84 -------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~~~~~~~  154 (198)
                             ...+.++++-...+.|.+.++.. ......+.........++++|.+..|+....  .+.|...++.......
T Consensus       161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g-~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~  239 (400)
T 3p5b_L          161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS  239 (400)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEECTTT-CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred             cccEEEEecCCceEEEECCCCeEEEEeCCC-CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence                   01223444445556677777664 2222223333445789999997666665542  4788888887654433


Q ss_pred             EEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCC
Q psy8758         155 IYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS  193 (198)
Q Consensus       155 ~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~  193 (198)
                      .. ...-.....++++|++..|+.+ ...+.|..+|++..
T Consensus       240 ~~-~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~  278 (400)
T 3p5b_L          240 LV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  278 (400)
T ss_dssp             EE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             EE-ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence            33 2333578899999887766655 45678999988643

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=98.17  E-value=0.00077  Score=49.39  Aligned_cols=163  Identities=10%  Similarity=0.154  Sum_probs=97.5

Q ss_pred             CCCceEEEeeCCCeEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCc
Q psy8758          11 LDNKFVISASDEMNLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDM   88 (198)
Q Consensus        11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~   88 (198)
                      .+|+.++.+ .++.||.-++......+.+....  .-..+..+..+|+|.+++..|  +..|.+..+..........   
T Consensus        30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~~~~~~---  103 (452)
T 3pbp_A           30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYSNVEDV---  103 (452)
T ss_dssp             TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--SSEEEEEECCTTCSCCCCH---
T ss_pred             cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--CCeEEEEEecCccccCccc---
Confidence            344444444 34678877876444333333321  122578899999999998875  5688888877321111000   


Q ss_pred             eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC---CCEEEEeecCCcEEEEEcCCCceee-EEe-------
Q psy8758          89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT---GREFVAGGYDKSLRLYLAHQGHSRD-IYH-------  157 (198)
Q Consensus        89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~---~~~l~~~~~d~~v~v~d~~~~~~~~-~~~-------  157 (198)
                         ....--+++.|.+...    .  .....+|..+.|+|-   +..|++-..|+.|++||+....... .+.       
T Consensus       104 ---~~~~~~q~~ty~l~~~----~--~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg  174 (452)
T 3pbp_A          104 ---SIQDAFQIFHYSIDEE----E--VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFG  174 (452)
T ss_dssp             ---HHHHTTEEEEEEGGGC----C----CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEE
T ss_pred             ---ccccccceeEEEcCCc----c--cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccC
Confidence               0001122445555431    1  113678999999996   4589999999999999998632211 121       


Q ss_pred             -ccCcccEEEEEEcCCCCEEEE--ecCCCeEEEE
Q psy8758         158 -TKRMQHVTHTVWSLDNKFVIS--ASDEMNLRVW  188 (198)
Q Consensus       158 -~~~~~~v~~~~~s~~~~~l~~--~~~dg~v~~w  188 (198)
                       ......|.+++|.+++-.|..  .+..|.|+-.
T Consensus       175 ~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          175 LDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             SCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             CCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence             112257889999998876665  4477877644

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.14  E-value=0.0018  Score=51.64  Aligned_cols=189  Identities=5%  Similarity=-0.079  Sum_probs=107.1

Q ss_pred             ceeEEEECCCCceEE-EeeCCCeEEEEEccCCce---eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEK---LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      .+.+++|.+....|+ +-...+.|+.+++.....   ...+.. ........+++.+.+..|+.+-...+.|.+.++...
T Consensus       425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~  503 (791)
T 3m0c_C          425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  503 (791)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence            456788888555444 444567788888764211   111111 012345789999888888887777888999988644


Q ss_pred             CCccc--------------cccCceEEEecC-CCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCc
Q psy8758          79 NSPLN--------------VHKDMTSAAANE-DFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKS  141 (198)
Q Consensus        79 ~~~~~--------------~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~  141 (198)
                      .....              ...+.++++-.. .+.|...++..  .....+ ...-.....|+++|.+..|+.+ ...+.
T Consensus       504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG--~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~  581 (791)
T 3m0c_C          504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS  581 (791)
T ss_dssp             SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC--CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence            32111              111223333222 25566666653  333333 3333568899999877766655 44678


Q ss_pred             EEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         142 LRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |..+++........... ..-....+|++.. +.++++-...+.|...+..+|+.
T Consensus       582 I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~  635 (791)
T 3m0c_C          582 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSD  635 (791)
T ss_dssp             EEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCC
T ss_pred             EEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcc
Confidence            99999876554444322 1123445666643 34444445667888888766654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.11  E-value=0.0014  Score=49.32  Aligned_cols=177  Identities=7%  Similarity=0.019  Sum_probs=99.0

Q ss_pred             eeEEEECCCCc-eEEEeeCCCeEEEEEcc-------CCce-----------eeeeeeeeecCceeeEEeCCCCCeEEEEe
Q psy8758           4 VTHTVWSLDNK-FVISASDEMNLRVWKAH-------ASEK-----------LGPIRKVVMSLRSNMVSWNPMEAFVFTAA   64 (198)
Q Consensus         4 v~~~~~s~~~~-~l~~~~~d~~i~i~~~~-------~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   64 (198)
                      ...++++|++. ++++-..++.|..+|+.       ++..           ...+...........++|+|+++.++++-
T Consensus       249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD  328 (496)
T 3kya_A          249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV  328 (496)
T ss_dssp             CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred             ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence            46788899554 44455577889999987       5543           11222222234457899999999777765


Q ss_pred             cCCccEEEEeccCCCCccccccCceEEEec--CCCcEEEEEccCCCc-ceeeecCCCcceE-EEEEc-------cCCCEE
Q psy8758          65 NEDFNLYSYDIRQLNSPLNVHKDMTSAAAN--EDFNLYSYDIRQLNS-PLNVHKDMTSAVT-SVDYS-------PTGREF  133 (198)
Q Consensus        65 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~-~~~~~~~~~~~i~-~~~~s-------p~~~~l  133 (198)
                      .....|+.++.......+.   ....+++.  ..|..   |    +. ....+    .... .++..       +++.++
T Consensus       329 ~~~h~I~kid~dg~~~~~~---~~~~~aG~~g~~G~~---D----G~~~~a~f----~~P~~gv~vd~~~~~~~~~g~ly  394 (496)
T 3kya_A          329 INNHYFMRSDYDEIKKEFI---TPYNFVGGYKQSGYR---D----DVGTEARM----NNPCQGVFVKNPDYTGEEEYDFY  394 (496)
T ss_dssp             TTTTEEEEEEEETTTTEEC---CCEEEEEBTTBCCCB---C----CBGGGCBC----SSEEEEEEEECTTCCSSCCEEEE
T ss_pred             CCCCEEEEEecCCCcceec---ccEEecCCCCCCccc---C----Cccccccc----CCCeEEEEEccccccccCCCeEE
Confidence            6677888876543211110   01122221  11100   1    10 01111    1223 34443       456666


Q ss_pred             EEeecCCcEEEEEcCCCceeeEEec------------c----------CcccEEEEEEcCC-CCEEEEecCCCeEEEEec
Q psy8758         134 VAGGYDKSLRLYLAHQGHSRDIYHT------------K----------RMQHVTHTVWSLD-NKFVISASDEMNLRVWKA  190 (198)
Q Consensus       134 ~~~~~d~~v~v~d~~~~~~~~~~~~------------~----------~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~  190 (198)
                      ++-...+.|+.++ .++......-.            +          .-.....++++++ |.++++=..+..|+.+++
T Consensus       395 VaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~  473 (496)
T 3kya_A          395 FVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM  473 (496)
T ss_dssp             EEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             EEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence            6666778888888 45543332211            1          0124778999997 776666677889999998


Q ss_pred             CCCcc
Q psy8758         191 HASEK  195 (198)
Q Consensus       191 ~~~~~  195 (198)
                      +....
T Consensus       474 ~~~~~  478 (496)
T 3kya_A          474 EQEEN  478 (496)
T ss_dssp             CCCC-
T ss_pred             CCCcc
Confidence            76443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.09  E-value=0.0014  Score=48.59  Aligned_cols=173  Identities=10%  Similarity=0.093  Sum_probs=96.2

Q ss_pred             eeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ...++++| +|.++++-...+.|..++...+... .+...........++|+|++++++++-...+.|..++.......+
T Consensus       228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~  306 (430)
T 3tc9_A          228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRL  306 (430)
T ss_dssp             CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred             ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccc
Confidence            46788999 6666665556788999998765432 222221223467899999999777776677889888765321111


Q ss_pred             ccccCceEEEec--CCCcEEEEEccCCCcceeeecCCCcceE-EEEEc--------cCCCEEEEeecCCcEEEEEcCCCc
Q psy8758          83 NVHKDMTSAAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVT-SVDYS--------PTGREFVAGGYDKSLRLYLAHQGH  151 (198)
Q Consensus        83 ~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~-~~~~s--------p~~~~l~~~~~d~~v~v~d~~~~~  151 (198)
                      .   ....+.+.  ..+..   |    +..   ....-.... .++..        ++|.++++-...+.|+.++ ..+.
T Consensus       307 ~---~~~~~ag~~g~~g~~---d----g~~---~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~  372 (430)
T 3tc9_A          307 T---TPYIVCGQQGAKDWV---D----GVG---KKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR  372 (430)
T ss_dssp             C---CCEEEEECTTCBCCB---C----EEG---GGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred             c---ceEEEeccCCCCCCC---C----CCC---cceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence            0   01111111  00100   0    000   000011122 45553        3455666656677888888 3454


Q ss_pred             eeeEEecc----------------CcccEEEEEEcCC-CCEEEEecCCCeEEEEecC
Q psy8758         152 SRDIYHTK----------------RMQHVTHTVWSLD-NKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       152 ~~~~~~~~----------------~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~  191 (198)
                      .....-.+                .-.....++++|+ +.++++-..++.|+.++++
T Consensus       373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            43333110                0125789999994 6666666667888888764

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.04  E-value=0.0029  Score=50.54  Aligned_cols=184  Identities=9%  Similarity=0.040  Sum_probs=111.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .|.++...+++.+.+ ++.++.+..||..+++. ..+...      .....|.++...+++...+.+  .+ -+.++|..
T Consensus       216 ~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt--~~-Gl~~~~~~  290 (795)
T 4a2l_A          216 QIQAILQQSPTRIWV-ATEGAGLFLINPKTKEI-KNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT--FN-DLNIYHEG  290 (795)
T ss_dssp             CEEEEEEEETTEEEE-EEBSSCEEEEETTTTEE-EEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE--SS-CEEEEETT
T ss_pred             eeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeE-EEeecCCCCccccCCCeEEEEEEcCCCCEEEEe--CC-hhheEcCC
Confidence            366677767776554 44444488888766542 222111      013458888888888876643  34 57888865


Q ss_pred             CCCCc-c------------------ccccCceEEEecCCCcEEEEEccCCCcceeeecC-------CCcceEEEEEccCC
Q psy8758          77 QLNSP-L------------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-------MTSAVTSVDYSPTG  130 (198)
Q Consensus        77 ~~~~~-~------------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~i~~~~~sp~~  130 (198)
                      +.... +                  ....+..+..|+.++.|..++...  .....+..       ....|.++...++|
T Consensus       291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~--~~~~~~~~~~~~~~l~~~~V~~i~~d~~g  368 (795)
T 4a2l_A          291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIR--NRFKNIRNIPYKNSLSDNVVSCIVEDKDK  368 (795)
T ss_dssp             TTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGG--GSSEEECCCTTSSSCSCSSEEEEEECTTS
T ss_pred             CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCc--ccceEEcCCCCCCCCCCCeeEEEEECCCC
Confidence            33210 0                  011123466677777888888764  22222211       23458999998888


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEec-------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHT-------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      .+.+ |+.++-|..||..+++.......       -....|.++...++|+.|..|+.++-+..+|.++++
T Consensus       369 ~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~  438 (795)
T 4a2l_A          369 NLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ  438 (795)
T ss_dssp             CEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred             CEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence            7554 56666699999887655433211       113578999998899844456666778999987764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.03  E-value=0.0014  Score=46.46  Aligned_cols=166  Identities=5%  Similarity=-0.056  Sum_probs=102.4

Q ss_pred             CCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--cc-cc------------
Q psy8758          22 EMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--PL-NV------------   84 (198)
Q Consensus        22 d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~-~~------------   84 (198)
                      ...|+..++....  ....+..   ......++|++.+..|+.+-...+.|..++......  .+ ..            
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~~---~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~   88 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVGG---LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW   88 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEEE---EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred             cCeEEEEECCCCceEEEEEecC---CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence            4578899987653  1122222   224568999998888887766678898888765421  11 10            


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEeccCcc
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                      ..+.++++-...+.|.++++.. ................+++.|.+..|..+.  ..+.|...++......... ...-.
T Consensus        89 ~~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~l~  166 (318)
T 3sov_A           89 LGEKLYWTDSETNRIEVSNLDG-SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSEIY  166 (318)
T ss_dssp             TTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCS
T ss_pred             CCCeEEEEECCCCEEEEEECCC-CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE-ECCCC
Confidence            1223344445566777777764 222222223445678999999766666554  3578888888654333322 22235


Q ss_pred             cEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         163 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      ....++++|++..|+.+ +..+.|..+|++.
T Consensus       167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG  197 (318)
T 3sov_A          167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG  197 (318)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence            67899999976665544 5678899998864

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.02  E-value=0.00011  Score=57.78  Aligned_cols=165  Identities=7%  Similarity=-0.069  Sum_probs=98.2

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC-----CCCc-cc------------
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ-----LNSP-LN------------   83 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-----~~~~-~~------------   83 (198)
                      ...|+..++...+....+..   ...+..++|++.+..|+.+-...+.|+.+++..     .... +.            
T Consensus       385 ~~~I~~id~~~~~~~~~~~~---~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD  461 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  461 (699)
T ss_dssp             TTC-CEECTTSCCEECCSCC---CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred             ccceEEEeCCCCcceeeecc---CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence            45677788766553333322   234678999998888887655678899988764     1111 10            


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeec--CCcEEEEEcCCCceeeEEeccC
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGY--DKSLRLYLAHQGHSRDIYHTKR  160 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~~~  160 (198)
                      ...+.++++-...+.|.++++..  .....+ .........++++|.+.+|+.+..  .+.|.++++..... ..+....
T Consensus       462 ~~~g~LY~tD~~~~~I~v~d~dg--~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~  538 (699)
T 1n7d_A          462 WIHSNIYWTDSVLGTVSVADTKG--VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTEN  538 (699)
T ss_dssp             CSSSBCEECCTTTSCEEEEBSSS--CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSS
T ss_pred             eeCCcEEEEeccCCeEEEEecCC--CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCC
Confidence            01223445555667788888764  222322 222345678899997665555443  26788877764332 2221222


Q ss_pred             cccEEEEEEcCCCCEE-EEecCCCeEEEEecCC
Q psy8758         161 MQHVTHTVWSLDNKFV-ISASDEMNLRVWKAHA  192 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~~  192 (198)
                      ......|+|+|++..| ++-+..+.|..+++..
T Consensus       539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG  571 (699)
T 1n7d_A          539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  571 (699)
T ss_dssp             CSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred             CCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence            3456789999976544 4445678899999864

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=97.99  E-value=0.0038  Score=49.86  Aligned_cols=183  Identities=9%  Similarity=0.030  Sum_probs=114.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .|.++...++|++.+ |+.+ -|.+|+..+++. ..+...      .....|.++...+++...+.  +.++-+..++..
T Consensus       264 ~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWig--t~~~Gl~~~~~~  338 (795)
T 4a2l_A          264 YIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGGMWLG--TYFGGLNYYHPI  338 (795)
T ss_dssp             BEEEEEECTTSCEEE-EESS-CEEEEETTTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSCEEEE--ESSSCEEEECGG
T ss_pred             eEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcCEEEE--ECCCCeEEeCCC
Confidence            478888888887554 4445 488888766542 222110      12346888988888876653  466678888764


Q ss_pred             CCCCc-c-----------------ccccCceEEEecCCCcEEEEEccCCCcceeeecC---------CCcceEEEEEccC
Q psy8758          77 QLNSP-L-----------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---------MTSAVTSVDYSPT  129 (198)
Q Consensus        77 ~~~~~-~-----------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---------~~~~i~~~~~sp~  129 (198)
                      ..... +                 ....+..+..|+.++.|..|+..+ . ....+..         ....|.++...++
T Consensus       339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~  416 (795)
T 4a2l_A          339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPIT-Q-RFTSYTLQEDESARGIGSNNIKAVYVDEK  416 (795)
T ss_dssp             GGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTT-C-CEEEECCC------CCSCSCEEEEEEETT
T ss_pred             cccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCC-C-cEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence            32210 0                 011123466677777888888775 2 2222211         2356889999888


Q ss_pred             CCEEEEeecCCcEEEEEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         130 GREFVAGGYDKSLRLYLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      |+.|-.|+.++-+..||..+++.......   .....|.++...++|++.+... + -+.+||.++++
T Consensus       417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~  482 (795)
T 4a2l_A          417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRS  482 (795)
T ss_dssp             TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTE
T ss_pred             CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCe
Confidence            88455666667799999988765433210   1235799999998888666543 4 48888887654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.98  E-value=0.001  Score=45.55  Aligned_cols=116  Identities=8%  Similarity=0.142  Sum_probs=78.2

Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEE
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTS  123 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~  123 (198)
                      ...+..++|+|++..++++...++.|...|..                               ++.++.+. ........
T Consensus        26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-------------------------------g~v~~~i~l~g~~D~EG   74 (255)
T 3qqz_A           26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-------------------------------GDLIRTIPLDFVKDLET   74 (255)
T ss_dssp             CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-------------------------------CCEEEEEECSSCSSEEE
T ss_pred             ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-------------------------------CCEEEEEecCCCCChHH
Confidence            34688999999988888877778888888765                               23333332 12245778


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCCCce---eeEEe-----ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQGHS---RDIYH-----TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~---~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +++.+++.++++.-.++.+.++++.....   .....     ...+.....++|+|.++.|.++.+.....+|.++
T Consensus        75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~  150 (255)
T 3qqz_A           75 IEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN  150 (255)
T ss_dssp             EEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             eEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence            89999888777765678899998876442   12221     1224457899999998777766655555555554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.96  E-value=0.0022  Score=46.17  Aligned_cols=70  Identities=16%  Similarity=0.149  Sum_probs=47.0

Q ss_pred             cceEEEEEccCCCEEEEeec-----------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-c
Q psy8758         119 SAVTSVDYSPTGREFVAGGY-----------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-S  180 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~-----------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~  180 (198)
                      ...+.+++.++|++.++...                 .+.|..+|.  ++.....  ..-...+.++|+||+++|+.+ +
T Consensus       165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~--~~l~~pNGia~spDg~~lYvadt  240 (355)
T 3sre_A          165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVA--EGFDFANGINISPDGKYVYIAEL  240 (355)
T ss_dssp             SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEE--EEESSEEEEEECTTSSEEEEEEG
T ss_pred             CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEee--cCCcccCcceECCCCCEEEEEeC
Confidence            35789999999998877541                 234444444  4332222  222467899999999877655 5


Q ss_pred             CCCeEEEEecCC
Q psy8758         181 DEMNLRVWKAHA  192 (198)
Q Consensus       181 ~dg~v~~w~~~~  192 (198)
                      ..+.|+.|+++.
T Consensus       241 ~~~~I~~~~~~~  252 (355)
T 3sre_A          241 LAHKIHVYEKHA  252 (355)
T ss_dssp             GGTEEEEEEECT
T ss_pred             CCCeEEEEEECC
Confidence            678999999863

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.92  E-value=0.0051  Score=49.11  Aligned_cols=166  Identities=7%  Similarity=-0.058  Sum_probs=101.8

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-----C-ccc------------
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-----S-PLN------------   83 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-----~-~~~------------   83 (198)
                      ...|+..++...+....+.   ....+..++|++....|+.+-...+.|+.+++....     . .+.            
T Consensus       403 ~~~Ir~i~l~~~~~~~l~~---~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD  479 (791)
T 3m0c_C          403 RHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  479 (791)
T ss_dssp             BSSEEEECTTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred             ccceeEeeccCCcceeeec---CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence            3457777776554322222   234567899999878888776667788888876421     1 111            


Q ss_pred             cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec--CCcEEEEEcCCCceeeEEeccCc
Q psy8758          84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY--DKSLRLYLAHQGHSRDIYHTKRM  161 (198)
Q Consensus        84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~~~~  161 (198)
                      ...+.++++-...+.|.+.++.. ......+.........|+++|.+.+|+....  .+.|...++........+ ...-
T Consensus       480 ~~~~~LY~tD~~~~~I~v~~ldG-~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv-~~~l  557 (791)
T 3m0c_C          480 WIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENI  557 (791)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSSC
T ss_pred             ecCCcEEEEecCCCeEEEEeCCC-CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-eCCC
Confidence            11224555666677788888764 2222222333445789999998666665542  367989888765544443 3333


Q ss_pred             ccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         162 QHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      .....|++++.+..|+.+ ...+.|...+++.
T Consensus       558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG  589 (791)
T 3m0c_C          558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG  589 (791)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence            578899999876666555 4567888888754

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.91  E-value=0.0045  Score=48.09  Aligned_cols=188  Identities=5%  Similarity=-0.045  Sum_probs=105.0

Q ss_pred             ceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ...+++|++.+..|+.+. ..+.|..++++.......+... .-.....+++.+.+..++.+-...+.|.+.++......
T Consensus        41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~  119 (619)
T 3s94_A           41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK  119 (619)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred             ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC-CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence            467889998666666554 4577888887644211222111 11356789999988888887667888999988654321


Q ss_pred             -cc-------------cccCceEEEe-cCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758          82 -LN-------------VHKDMTSAAA-NEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL  144 (198)
Q Consensus        82 -~~-------------~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v  144 (198)
                       +.             ...+.++++- +..+.|...++..  .....+ ...-...+.++++|+++.|..+ ...+.|..
T Consensus       120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG--~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~  197 (619)
T 3s94_A          120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK  197 (619)
T ss_dssp             EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC--CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence             11             0111222222 1234444444442  222222 2234457899999976655555 45678999


Q ss_pred             EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +|+......... .+......++++..+ ..+.+-...+.|...|..+|+.
T Consensus       198 ~~~dG~~~~~~~-~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~  246 (619)
T 3s94_A          198 SNLDGTNRQAVV-KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG  246 (619)
T ss_dssp             ESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred             ecCCCCccEEEE-eCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence            998764443332 211223346677655 4444555678899999887764

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.89  E-value=0.0049  Score=47.93  Aligned_cols=186  Identities=3%  Similarity=-0.111  Sum_probs=111.0

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+.+++|++.+..|+.+ ..++.|+.++++.... ..+... .......+++.+.+..|+.+-...+.|.+.++......
T Consensus        38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~  115 (628)
T 4a0p_A           38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ  115 (628)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred             ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence            46689999866655544 4678888888865432 222221 12346788998888888877666788999987643321


Q ss_pred             cc---cc-----------cCceEEEe-cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe-ecCCcEEEE
Q psy8758          82 LN---VH-----------KDMTSAAA-NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYDKSLRLY  145 (198)
Q Consensus        82 ~~---~~-----------~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v~  145 (198)
                      ..   .-           .+.++.+- +..+.|...++..  .....+...-.....++++++++.|..+ ...+.|..+
T Consensus       116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~  193 (628)
T 4a0p_A          116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESS  193 (628)
T ss_dssp             EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence            11   11           11122222 1234455555543  2233332344567899999987766555 456789999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      |+..... ..+ ........++++.. +..+.+-...+.|...|..+|+.
T Consensus       194 d~dG~~~-~v~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~  240 (628)
T 4a0p_A          194 NMLGLNR-EVI-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN  240 (628)
T ss_dssp             ETTSCSC-EEE-EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred             cCCCCce-EEe-eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence            9876544 233 22234456777765 44555555678899888777653

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.85  E-value=0.0022  Score=42.78  Aligned_cols=150  Identities=8%  Similarity=-0.001  Sum_probs=80.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCce------eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK------LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      .+.+++|+|+|.+.++  .+|.+.-.+..+...      ...+....-. ....+.|.|++...++   .||.|+-++..
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav---~dG~iyr~~pP  115 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV---SKDKLYKASPP  115 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE---ETTEEEEESCC
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe---CCCEEEEeCCC
Confidence            4678999999986666  667665555433211      1111111111 1367889999887765   35877766643


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc-----
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH-----  151 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~-----  151 (198)
                      +....                   -|-    ..-...-...=..+..+.+.|+|.+.+..  |+.++-.....+.     
T Consensus       116 ~~~~~-------------------~Wl----~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl  170 (236)
T 1tl2_A          116 QSDTD-------------------NWI----ARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWL  170 (236)
T ss_dssp             CSTTC-------------------CHH----HHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHH
T ss_pred             cCCCC-------------------cee----ccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccc
Confidence            21000                   000    00011111122457899999999977777  7765443333221     


Q ss_pred             -eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758         152 -SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       152 -~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v  185 (198)
                       ....+-...-..-..+.|.|++.+.+..  ++.+
T Consensus       171 ~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~  203 (236)
T 1tl2_A          171 ARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF  203 (236)
T ss_dssp             HHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred             cccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence             1111211222345667899999877765  6744

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.85  E-value=0.0067  Score=48.34  Aligned_cols=184  Identities=11%  Similarity=0.034  Sum_probs=107.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee--eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK--VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .|.++...++|++. .|+.++-+..|+..++.. ..+..  ......|.++...+++...+  |..++-+..++..+...
T Consensus       364 ~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~~  439 (781)
T 3v9f_A          364 VVSSVCDDGQGKLW-IGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGNLWF--GTYLGNISYYNTRLKKF  439 (781)
T ss_dssp             CEEEEEECTTSCEE-EEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSCEEE--EETTEEEEEECSSSCEE
T ss_pred             ceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCCEEE--EeccCCEEEEcCCCCcE
Confidence            47788888777644 456556688888754322 11111  11235678888887777655  34556678887653221


Q ss_pred             c-c-------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCC-----CcceEEEEEccCCCEEEEeecCCc
Q psy8758          81 P-L-------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-----TSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        81 ~-~-------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                      . +             ....+..+..++. +.+..+|..+ .+........     ...+.++...++|++.+.....| 
T Consensus       440 ~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-  516 (781)
T 3v9f_A          440 QIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-  516 (781)
T ss_dssp             EECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-
T ss_pred             EEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-
Confidence            0 0             0111223444555 5688888775 2222211111     35689999999888665543344 


Q ss_pred             EEEEEcCCCceeeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         142 LRLYLAHQGHSRDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       142 v~v~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +..||..+++.......  -....|.++...++|.+.++.. +|.+..||.++++
T Consensus       517 l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~  570 (781)
T 3v9f_A          517 VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD  570 (781)
T ss_dssp             EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred             EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence            77788877654332111  1135689999999998766544 6655888877654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.82  E-value=0.0021  Score=46.32  Aligned_cols=60  Identities=18%  Similarity=0.118  Sum_probs=36.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-----eecCceeeEEeCCC---CCeEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-----VMSLRSNMVSWNPM---EAFVFTA   63 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~~~~   63 (198)
                      .-..++|.|+|+.++++...|.|++++.. +.....+...     ........++|+|+   +..++++
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~   86 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS   86 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence            35689999999944455677999988853 3321111111     11234578999996   5556554

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.79  E-value=0.0046  Score=44.50  Aligned_cols=58  Identities=14%  Similarity=0.181  Sum_probs=37.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee----ecCceeeEEeCCC---CCeEEEEe
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV----MSLRSNMVSWNPM---EAFVFTAA   64 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~---~~~~~~~~   64 (198)
                      .-..++|.|+|++++ +..+|.|++++  +++ ...+....    .......++|+|+   +..++++-
T Consensus        32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~   96 (352)
T 2ism_A           32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR   96 (352)
T ss_dssp             CEEEEEECTTSCEEE-EETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred             CceEEEEcCCCeEEE-EeCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence            346899999998554 45678999888  443 22222111    1345688999998   56666543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.76  E-value=0.0048  Score=43.81  Aligned_cols=161  Identities=6%  Similarity=0.018  Sum_probs=91.4

Q ss_pred             ceeEEEE---CCCCceEEEee-------------CCCeEEEEEcc---CCceeeeeee--eee---------cCceeeEE
Q psy8758           3 HVTHTVW---SLDNKFVISAS-------------DEMNLRVWKAH---ASEKLGPIRK--VVM---------SLRSNMVS   52 (198)
Q Consensus         3 ~v~~~~~---s~~~~~l~~~~-------------~d~~i~i~~~~---~~~~~~~~~~--~~~---------~~~v~~~~   52 (198)
                      .+..+.|   .|+++++++..             .+..+..||+.   +++....+.-  ...         ......++
T Consensus        64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva  143 (334)
T 2p9w_A           64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA  143 (334)
T ss_dssp             EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred             eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence            3578999   68888777543             26779999998   6664433321  100         12367888


Q ss_pred             eCCCCCeEEEEecCC-ccEEEEeccCCCCccccccCceEEEecCCCc-EEEEEccCCCcceeeecCCCcceEEEEEccCC
Q psy8758          53 WNPMEAFVFTAANED-FNLYSYDIRQLNSPLNVHKDMTSAAANEDFN-LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG  130 (198)
Q Consensus        53 ~~~~~~~~~~~~~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~  130 (198)
                      ..++|+..++ ++.. +.|...+.                    ||+ +..|.+..+ .     .......+.|+++|+|
T Consensus       144 vD~~GnaYVt-~s~~~~~I~rV~p--------------------dG~~~~~~~~~~~-~-----~~~~~G~nGIv~~pdg  196 (334)
T 2p9w_A          144 QDRDGNSYVA-FALGMPAIARVSA--------------------DGKTVSTFAWESG-N-----GGQRPGYSGITFDPHS  196 (334)
T ss_dssp             ECTTSCEEEE-EEESSCEEEEECT--------------------TSCCEEEEEECCC-C-----SSSCCSCSEEEEETTT
T ss_pred             ECCCCCEEEe-CCCCCCeEEEEeC--------------------CCCEEeeeeecCC-C-----cccccCcceEEEeCCC
Confidence            8888887664 3344 44444443                    332 455554431 1     1112346789999999


Q ss_pred             CEEEEeecCCcEEEEEcCCCceeeEEec--cC---cccEEEE-EEcCCCCE-EEEecCCCeEEEEec
Q psy8758         131 REFVAGGYDKSLRLYLAHQGHSRDIYHT--KR---MQHVTHT-VWSLDNKF-VISASDEMNLRVWKA  190 (198)
Q Consensus       131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~--~~---~~~v~~~-~~s~~~~~-l~~~~~dg~v~~w~~  190 (198)
                      +.|++....+.+..+|+........-..  +.   ......+ .--.+|+. |++....+.+.+.+.
T Consensus       197 ~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~  263 (334)
T 2p9w_A          197 NKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW  263 (334)
T ss_dssp             TEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred             CEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence            9888876699999999985332111111  21   1223343 23346776 444445555555443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.73  E-value=0.0072  Score=45.10  Aligned_cols=60  Identities=8%  Similarity=0.164  Sum_probs=37.2

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-------ecCceeeEEeCCC---CCeEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-------MSLRSNMVSWNPM---EAFVFTA   63 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~---~~~~~~~   63 (198)
                      .-..++|.|+|+++++-...+.|++++..+++. ..+....       .......++|+|+   +..++++
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~   97 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence            456899999999776654445788887654542 2222111       1344568999996   5566554

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.65  E-value=0.0063  Score=43.83  Aligned_cols=57  Identities=7%  Similarity=0.018  Sum_probs=36.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee----eecCceeeEEeCCC---CCeEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPM---EAFVFTA   63 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~~~~~   63 (198)
                      .-..++|.|+|++++ +..+|.|++++ .+++  ..+...    ........++++|+   +..++++
T Consensus        30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~   93 (354)
T 3a9g_A           30 VPWSIAPLGGGRYLV-TERPGRLVLIS-PSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY   93 (354)
T ss_dssp             CEEEEEEEETTEEEE-EETTTEEEEEC-SSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred             CCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence            356899999998554 45668998887 3443  223211    11245688999997   5566554

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.58  E-value=0.011  Score=43.45  Aligned_cols=121  Identities=12%  Similarity=0.109  Sum_probs=74.4

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-e--------eeeeee-------ecCceeeEEeCCCC---CeEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-G--------PIRKVV-------MSLRSNMVSWNPME---AFVFTA   63 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~--------~~~~~~-------~~~~v~~~~~~~~~---~~~~~~   63 (198)
                      .|..+..||+|++||..+.. .|.|-.+..+... .        ..+...       ...+|..+.|+|-+   ..+++-
T Consensus        67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL  145 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL  145 (452)
T ss_dssp             TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence            46789999999999988654 7999888733210 0        011111       24578999999954   456654


Q ss_pred             ecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE--eecCCc
Q psy8758          64 ANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA--GGYDKS  141 (198)
Q Consensus        64 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~d~~  141 (198)
                       ..|+.|++||+....                +.-.   +++. .....-.......+.+++|.+++-.|..  ....|.
T Consensus       146 -tsD~~Ir~yDl~~s~----------------~~P~---~L~k-~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GD  204 (452)
T 3pbp_A          146 -KEDDTITMFDILNSQ----------------EKPI---VLNK-PNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGD  204 (452)
T ss_dssp             -ETTSCEEEEETTCTT----------------SCCE---EESC-CCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCE
T ss_pred             -ecCCEEEEEEcccCC----------------CCCc---chhc-cccccCCCcccceEEEEEEcCCCcEEEEEecCCCCC
Confidence             578999999987521                0001   1111 1111222333467889999998776655  447777


Q ss_pred             EEEE
Q psy8758         142 LRLY  145 (198)
Q Consensus       142 v~v~  145 (198)
                      |+-.
T Consensus       205 IYAl  208 (452)
T 3pbp_A          205 IFAF  208 (452)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7544

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.50  E-value=0.0024  Score=45.62  Aligned_cols=178  Identities=11%  Similarity=0.019  Sum_probs=95.2

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEe-cCCccEEEEeccCCCCc---------
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAA-NEDFNLYSYDIRQLNSP---------   81 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~-~~d~~i~~~d~~~~~~~---------   81 (198)
                      ..++.++.||.|.-+|..+|+..-.+... ...++....-  .+.+..+++.. ..||.+..++..+....         
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            46888999999999999998866555432 1111111100  01122333332 46788877776543221         


Q ss_pred             ----cccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCc-c------eEEEEEc-----cCCCEE
Q psy8758          82 ----LNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS-A------VTSVDYS-----PTGREF  133 (198)
Q Consensus        82 ----~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~------i~~~~~s-----p~~~~l  133 (198)
                          +...            .+..+++++.++.+...|+++ ++.+..+..... .      ..|....     -.+..+
T Consensus        90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v  168 (339)
T 2be1_A           90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN-GEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI  168 (339)
T ss_dssp             TTCSEEEECC----------CCEEEEECEEEEEEEEEETTT-CCEEEEESTTCBCC--------------------CCEE
T ss_pred             eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCC-CcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence                1111            355678999999999999999 788777753211 0      0111111     123567


Q ss_pred             EEeecCCcEEEEEcCCCceeeEEe----ccCc--ccE-EEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         134 VAGGYDKSLRLYLAHQGHSRDIYH----TKRM--QHV-THTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       134 ~~~~~d~~v~v~d~~~~~~~~~~~----~~~~--~~v-~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.+..+..+.+.+ ++++ +....    ....  ..+ .+-..+.|+.+++ ++.||.|.-+|..+|+.+
T Consensus       169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~~dg~v~A~d~~~G~~~  235 (339)
T 2be1_A          169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PFRDKSLLASDLDFRIAR  235 (339)
T ss_dssp             EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EETTTEEEEECSTTCCEE
T ss_pred             EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-ECCCCEEEEEECCCCcEE
Confidence            7777777777766 4443 22110    0000  000 0000123456544 677888888888877654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=97.47  E-value=0.027  Score=44.90  Aligned_cols=183  Identities=6%  Similarity=-0.062  Sum_probs=107.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee--------eeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK--------VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      .|.++...++|. |-.|+.++-|..++...+.. ..+..        ......|.++...+++...+.  ..++-+..++
T Consensus       314 ~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig--t~~~Gl~~~~  389 (781)
T 3v9f_A          314 SARYIFQDSFNN-IWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG--TDGGGINVFE  389 (781)
T ss_dssp             CEEEEEECSSCC-EEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEEEEEECTTSCEEEE--EBSSCEEEEE
T ss_pred             eEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceEEEEEcCCCCEEEE--eCCCcEEEEE
Confidence            477888888776 44466666688888765432 22211        012345788888887776543  3455677777


Q ss_pred             ccCCCCc-c--------------ccccCceEEEecCCCcEEEEEccCCCcceeeec---CCCcceEEEEEccCCCEEEEe
Q psy8758          75 IRQLNSP-L--------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK---DMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        75 ~~~~~~~-~--------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~  136 (198)
                      ..+.... +              ....+..+..|+.++.+..+|..+ + ....+.   .....|.++...++|++.+..
T Consensus       390 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~v~~i~~d~~g~lwigt  467 (781)
T 3v9f_A          390 NGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL-K-KFQIIELEKNELLDVRVFYEDKNKKIWIGT  467 (781)
T ss_dssp             TTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS-C-EEEECCSTTTCCCCEEEEEECTTSEEEEEE
T ss_pred             CCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC-C-cEEEeccCCCCCCeEEEEEECCCCCEEEEE
Confidence            6532110 0              001122345556556677777764 2 233332   134578899888888755544


Q ss_pred             ecCCcEEEEEcCCCceeeEEecc----CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         137 GYDKSLRLYLAHQGHSRDIYHTK----RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       137 ~~d~~v~v~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                       . +-+..||..+++........    ....|.++...++|++.+.....| +..+|.++++
T Consensus       468 -~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~  526 (781)
T 3v9f_A          468 -H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL  526 (781)
T ss_dssp             -T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE
T ss_pred             -C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe
Confidence             3 45889998876654433111    135789999999998766443344 6778776543

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.46  E-value=0.015  Score=41.72  Aligned_cols=100  Identities=14%  Similarity=0.177  Sum_probs=67.3

Q ss_pred             EEEecC--CCcEEEEEccCCCcceeeecC------CC-cceEEEEE--ccC-CC-EEEEeecCCcEEEEEcC-------C
Q psy8758          90 SAAANE--DFNLYSYDIRQLNSPLNVHKD------MT-SAVTSVDY--SPT-GR-EFVAGGYDKSLRLYLAH-------Q  149 (198)
Q Consensus        90 ~~~~~~--~~~i~~~d~~~~~~~~~~~~~------~~-~~i~~~~~--sp~-~~-~l~~~~~d~~v~v~d~~-------~  149 (198)
                      +++...  +.+|.+|++.....++..+..      .. ..+..+++  +|. ++ ++++...+|.+..|++.       +
T Consensus        90 ~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~  169 (355)
T 3amr_A           90 AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS  169 (355)
T ss_dssp             EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE
T ss_pred             EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc
Confidence            444445  689999977422334555522      11 45666777  775 44 67788889999999883       2


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      .+.+..+..+  +.+..+...+....|+.+-++..|+.++.+
T Consensus       170 ~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~  209 (355)
T 3amr_A          170 GKKVRAFKMN--SQTEGMAADDEYGRLYIAEEDEAIWKFSAE  209 (355)
T ss_dssp             EEEEEEEECS--SCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred             ceEEEEecCC--CCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence            3444444333  678899999988889989888777777754

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.42  E-value=0.014  Score=40.67  Aligned_cols=176  Identities=14%  Similarity=0.129  Sum_probs=86.4

Q ss_pred             CCceEEEeeCC-----CeEEEEEccCCce--eeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCC
Q psy8758          12 DNKFVISASDE-----MNLRVWKAHASEK--LGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLN   79 (198)
Q Consensus        12 ~~~~l~~~~~d-----~~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~   79 (198)
                      +++.++.|+.+     ..+.+||+.+.+.  -..+........-.+++. .++ .+++.|+.+     ..+.+||..+..
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~d~~~~~  139 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGD-MIYVSGGFDGSRRHTSMERYDPNIDQ  139 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECC-EEEEEcccCCCcccceEEEEcCCCCe
Confidence            45666666644     4688889876551  122221111111111222 233 455555432     357888876533


Q ss_pred             Cc-------------cccccCceEEEecCC-----CcEEEEEccCCCcceee--ecCCCcceEEEEEccCCCEEEEeecC
Q psy8758          80 SP-------------LNVHKDMTSAAANED-----FNLYSYDIRQLNSPLNV--HKDMTSAVTSVDYSPTGREFVAGGYD  139 (198)
Q Consensus        80 ~~-------------~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~~d  139 (198)
                      -.             .....+.+++.|+.+     ..+..||+.+ ..-...  +.........+.+  +++.++.|+.+
T Consensus       140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~  216 (301)
T 2vpj_A          140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT-GHWTNVTPMATKRSGAGVALL--NDHIYVVGGFD  216 (301)
T ss_dssp             EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred             EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCC-CcEEeCCCCCcccccceEEEE--CCEEEEEeCCC
Confidence            11             011123455665543     4578888875 222111  1111111122222  56777787764


Q ss_pred             -----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         140 -----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       140 -----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                           ..+.+||+.+.+....-..... .....+.  -++++++.|+.+     ..+.+||+++.+
T Consensus       217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             CCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence                 4689999988765443211111 1112222  267777777654     467888887643

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.42  E-value=0.014  Score=40.68  Aligned_cols=176  Identities=9%  Similarity=0.063  Sum_probs=84.3

Q ss_pred             CCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCCCc
Q psy8758          12 DNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLNSP   81 (198)
Q Consensus        12 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~   81 (198)
                      +++.++.|+.+     ..+.+||..+.+- ..+........-.+++. -++. +++.|+.+     ..+..||..+..-.
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~  137 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW-TSVANMRDRRSTLGAAV-LNGL-LYAVGGFDGSTGLSSVEAYNIKSNEWF  137 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTE-EEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCce-eeCCCCCccccceEEEE-ECCE-EEEEcCCCCCccCceEEEEeCCCCeEe
Confidence            55666666643     3577888876542 22221111111111222 2344 44444433     34677887643210


Q ss_pred             --------c-----ccccCceEEEecC-------CCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecC
Q psy8758          82 --------L-----NVHKDMTSAAANE-------DFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYD  139 (198)
Q Consensus        82 --------~-----~~~~~~~~~~~~~-------~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d  139 (198)
                              .     ....+.+++.|+.       ...+..||+.+ ..-..  .+.........+.+  +++.++.|+.+
T Consensus       138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~  214 (302)
T 2xn4_A          138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT-NEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD  214 (302)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred             ecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC-CcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence                    0     1112344555543       24578888875 22111  11111111222222  57777888764


Q ss_pred             -----CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         140 -----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       140 -----~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                           ..+.+||+.+.+....-.......-..+ ...++++++.|+.+     ..+.+||+.+.+
T Consensus       215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV-CAVNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCcccceEEEEeCCCCCEeeCCCCCCccccCeE-EEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence                 4689999988765443211111010111 12266777777654     348999987643

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.42  E-value=0.027  Score=43.78  Aligned_cols=156  Identities=4%  Similarity=-0.053  Sum_probs=90.8

Q ss_pred             ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+.+++|.+.+..|+.+ ...+.|+.++++.... ..+... .-..+..+++.+.+..|+.+-...+.|.+.++...   
T Consensus       350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~---  424 (619)
T 3s94_A          350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT---  424 (619)
T ss_dssp             SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---
T ss_pred             ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC---
Confidence            45678888855555444 3567788888765332 222211 12345678888777777776555667777766532   


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEec
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHT  158 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~  158 (198)
                                                  ....+ ...-.....+++.|....|..+.  ....|...++......... .
T Consensus       425 ----------------------------~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~-~  475 (619)
T 3s94_A          425 ----------------------------MRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLV-N  475 (619)
T ss_dssp             ----------------------------SCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-C
T ss_pred             ----------------------------eEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEE-e
Confidence                                        11111 22234567899998744454443  2356766666543333222 3


Q ss_pred             cCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758         159 KRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA  192 (198)
Q Consensus       159 ~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~  192 (198)
                      ..-.....+++++++..|+.+ +..+.|...+++.
T Consensus       476 ~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG  510 (619)
T 3s94_A          476 TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG  510 (619)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred             CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence            334567889999876666555 4456788887753

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=97.42  E-value=0.015  Score=40.90  Aligned_cols=157  Identities=9%  Similarity=0.075  Sum_probs=73.6

Q ss_pred             EEECCCCceEEEeeCC--------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe---cCCcc
Q psy8758           7 TVWSLDNKFVISASDE--------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA---NEDFN   69 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d--------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~d~~   69 (198)
                      --++++|.+|+-....              ..|+..+++..+. ..+..    .  ....|+++++.|+.+.   .....
T Consensus        58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~----~--~~~~~s~~g~~Iy~~~~~~~~~~~  130 (302)
T 3s25_A           58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP----D--PCIYASLIGNYIYYLHYDTQTATS  130 (302)
T ss_dssp             EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC----S--CEEEEEEETTEEEEEEESSSSCEE
T ss_pred             eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec----C--CccEEEEeCCEEEEEeecCCCCce
Confidence            3467888887766542              3566666655442 22221    1  1336788899988764   23445


Q ss_pred             EEEEeccCCCC-c--------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758          70 LYSYDIRQLNS-P--------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK  140 (198)
Q Consensus        70 i~~~d~~~~~~-~--------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~  140 (198)
                      |...++..... .        +......++.+.....+|...++.. .. .+.+..  ... ...++|++++|+-....+
T Consensus       131 Iy~~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~-~~~l~~--~~~-~~~~~P~g~~iy~t~~~~  205 (302)
T 3s25_A          131 LYRIRIDGEEKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTAS-QS-EALFYD--CNC-YKPVVLDDTNVYYMDVNR  205 (302)
T ss_dssp             EEEEETTSCCCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTT-TE-EEEEEC--SCE-EEEEEEETTEEEEEEGGG
T ss_pred             EEEEECCCCCeEEEeCCCceEeeEECCEEEEEeCCCceEEEEECCC-CC-EEEEeC--CCc-cceeeecCCEEEEEEcCC
Confidence            55555542211 1        1111122233333345555555543 22 222221  222 234556766666655432


Q ss_pred             --cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC
Q psy8758         141 --SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       141 --~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~  181 (198)
                        .|..-++..+... .+    ... ....|+|++++|..+..
T Consensus       206 ~~~I~~~~ldG~~~~-~L----t~~-~~~~~~~~g~~Iy~~~~  242 (302)
T 3s25_A          206 DNAIVHVNINNPNPV-VL----TEA-NIEHYNVYGSLIFYQRG  242 (302)
T ss_dssp             TTEEEEECSSSCCCE-EC----SCS-CEEEEEEETTEEEEEEC
T ss_pred             CcEEEEEECCCCCeE-EE----eCC-CcceEEECCCEEEEEEC
Confidence              2333333333221 11    022 23456777776665543

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.34  E-value=0.021  Score=40.96  Aligned_cols=155  Identities=10%  Similarity=0.060  Sum_probs=80.3

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-----eecCceeeEEeCCC---CCeEEEEe--cCCccEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-----VMSLRSNMVSWNPM---EAFVFTAA--NEDFNLYS   72 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~~~~~--~~d~~i~~   72 (198)
                      .-..++|.|+|+++++--..|.|++++..+++. ..+...     ........++++|+   +..++++-  ..+..|.-
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            457899999999777665589999888655542 222211     12345688999995   44554431  12333433


Q ss_pred             EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeec-------------
Q psy8758          73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGY-------------  138 (198)
Q Consensus        73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~-------------  138 (198)
                      +...........          ....-.++         ..+. ........|+|.|||.+.++.+.             
T Consensus       112 ~~~~~~~~~~~~----------~~~~~~i~---------~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~  172 (347)
T 3das_A          112 MLYDEKKPSGEQ----------LGAPDTVF---------RGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSL  172 (347)
T ss_dssp             EEBCTTSCTTCC----------BCCCEEEE---------EEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCS
T ss_pred             EEeCCCCccccc----------CCCcEEEE---------EcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCC
Confidence            433221000000          00000011         1111 11123467999999987776542             


Q ss_pred             CCcEEEEEcCCCc-------eeeEEeccCcccEEEEEEcCCCCEEEE
Q psy8758         139 DKSLRLYLAHQGH-------SRDIYHTKRMQHVTHTVWSLDNKFVIS  178 (198)
Q Consensus       139 d~~v~v~d~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~~  178 (198)
                      .|.|.-++....-       ....+..+|. ....++|+|+|+++++
T Consensus       173 ~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~  218 (347)
T 3das_A          173 GGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS  218 (347)
T ss_dssp             TTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred             CCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence            2455555544220       1123334553 4568899999886654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.30  E-value=0.021  Score=39.95  Aligned_cols=175  Identities=10%  Similarity=0.033  Sum_probs=86.1

Q ss_pred             CCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC------ccEEEEeccCCCCc
Q psy8758          12 DNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED------FNLYSYDIRQLNSP   81 (198)
Q Consensus        12 ~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d------~~i~~~d~~~~~~~   81 (198)
                      +++.++.|+.+    ..+.+||..+.+- ..+........-.+++ .-++ .+++.|+.+      ..+..||..+..-.
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~  131 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSW-YSKLGPPTPRDSLAAC-AAEG-KIYTSGGSEVGNSALYLFECYDTRTESWH  131 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEE-EEEECCSSCCBSCEEE-EETT-EEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeE-EECCCCCccccceeEE-EECC-EEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence            55666667644    5688888876642 2222111111111111 1234 444445443      45888887654310


Q ss_pred             --------c-----ccccCceEEEecC---------CCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEee
Q psy8758          82 --------L-----NVHKDMTSAAANE---------DFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        82 --------~-----~~~~~~~~~~~~~---------~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                              .     ....+.+++.|+.         ...+..||+.+ ..-..  .+.........+.+  +++.++.|+
T Consensus       132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG  208 (306)
T 3ii7_A          132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-ETWTELCPMIEARKNHGLVFV--KDKIFAVGG  208 (306)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred             eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC-CeEEECCCccchhhcceEEEE--CCEEEEEeC
Confidence                    0     1112334555543         34578888876 22111  11111111122222  567777776


Q ss_pred             cC-----CcEEEEEcCCCceeeEEeccC-cccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         138 YD-----KSLRLYLAHQGHSRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       138 ~d-----~~v~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                      .+     ..+.+||+.+.+....-.... ......+.+  ++++++.|+.+     +.+.+||+.+.+
T Consensus       209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence            53     468999998876543321111 111222222  66777777643     568899987643

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.26  E-value=0.043  Score=42.75  Aligned_cols=190  Identities=6%  Similarity=-0.029  Sum_probs=108.1

Q ss_pred             cceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeee----eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      +.+.+++|.+....|+.+. ..+.|+.++++.......+...    .....+..+++.+.+..|+.+.+..+.|.+.++.
T Consensus       340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~  419 (628)
T 4a0p_A          340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD  419 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence            3467889988666555554 4577888877543322222210    0123567899999888888776667788888775


Q ss_pred             CCCCc-c-c------------cccCceEEEecCCC--cEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee-c
Q psy8758          77 QLNSP-L-N------------VHKDMTSAAANEDF--NLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-Y  138 (198)
Q Consensus        77 ~~~~~-~-~------------~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~-~  138 (198)
                      ..... + .            +..+.++.+-....  .|...++.  +.....+ ...-...+.++++++++.|..+. .
T Consensus       420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d--G~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~  497 (628)
T 4a0p_A          420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD--GTEREVLFFSGLSKPIALALDSRLGKLFWADSD  497 (628)
T ss_dssp             SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT--SCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred             CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC--CCCcEEEEeccCCCccEEEEeCCCCEEEEEeCC
Confidence            33211 1 0            11122222222121  34444443  2322222 22334578999999877776654 4


Q ss_pred             CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .+.|..+++.... ...+.........+++... +..+.+=...+.|...|..+|+.
T Consensus       498 ~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~  552 (628)
T 4a0p_A          498 LRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREG  552 (628)
T ss_dssp             TTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSC
T ss_pred             CCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCC
Confidence            6789999986543 3333223334567777755 44455555667888888877664

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.22  E-value=0.014  Score=38.93  Aligned_cols=145  Identities=4%  Similarity=-0.072  Sum_probs=77.6

Q ss_pred             CCceEEEeeCCCeEEEEEccCCce--e-eeeeeeee--cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-ccccc
Q psy8758          12 DNKFVISASDEMNLRVWKAHASEK--L-GPIRKVVM--SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-PLNVH   85 (198)
Q Consensus        12 ~~~~l~~~~~d~~i~i~~~~~~~~--~-~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-~~~~~   85 (198)
                      ....|+...+| +++.=....+..  . ........  =..+..++|+|++...++   .++.++-.+..+... .+.  
T Consensus         3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~~W~--   76 (236)
T 1tl2_A            3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV---LNDKIYKGTPPTHDNDNWM--   76 (236)
T ss_dssp             CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE---ETTEEEEESCCCSTTCCHH--
T ss_pred             cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE---eCCeEEEECCCCCCccccc--
Confidence            34567777777 665544443331  0 11122111  135779999998875543   456665555432100 000  


Q ss_pred             cCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCcee------eEEec
Q psy8758          86 KDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR------DIYHT  158 (198)
Q Consensus        86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~------~~~~~  158 (198)
                                             .....+- ..-..-.++.|.|+|.+.++  .||.|+-++-.+...-      ..+-.
T Consensus        77 -----------------------~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~  131 (236)
T 1tl2_A           77 -----------------------GRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGS  131 (236)
T ss_dssp             -----------------------HHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEEC
T ss_pred             -----------------------ccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEecc
Confidence                                   0011110 00111467899999998877  5698887776442111      11111


Q ss_pred             cCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         159 KRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       159 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      .-=..+..+.|.|+|.+.+..  |+.++-+.
T Consensus       132 ~gw~~~~~lff~p~G~Lyav~--dg~lyr~~  160 (236)
T 1tl2_A          132 GGWSGFKFLFFHPNGYLYAVH--GQQFYKAL  160 (236)
T ss_dssp             SSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred             CCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence            111467899999999987766  77764433

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.12  E-value=0.046  Score=40.46  Aligned_cols=181  Identities=9%  Similarity=0.133  Sum_probs=111.8

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---cc
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---LN   83 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~~   83 (198)
                      .-.+|..+.+|.-. ..++++||+++...   ++.+.....|.--.|-.+.. |..+  .+..|+-|++.....+   +.
T Consensus        71 AIMnP~~~iiALra-g~~lQiFnle~K~k---lks~~~~e~VvfWkWis~~~-l~lV--T~taVyHWsi~~~s~P~kvFd  143 (494)
T 1bpo_A           71 AIMNPASKVIALKA-GKTLQIFNIEMKSK---MKAHTMTDDVTFWKWISLNT-VALV--TDNAVYHWSMEGESQPVKMFD  143 (494)
T ss_dssp             EEECSSSSCEEEEE-TTEEEEEETTTTEE---EEEEECSSCCCEEEEEETTE-EEEE--CSSEEEEEESSSSCCCEEEEE
T ss_pred             eeeCCCCcEEEEec-CCeEEEEchHHhhh---hcceecCCCceEEEecCCCe-EEEE--cCCeeEEecccCCCCchhhee
Confidence            44678888777765 67999999988765   44444456677777765544 4443  3678999998653322   22


Q ss_pred             cccC----------------ceEEEec------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC---CEEEEeec
Q psy8758          84 VHKD----------------MTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG---REFVAGGY  138 (198)
Q Consensus        84 ~~~~----------------~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~---~~l~~~~~  138 (198)
                      .|..                ..++.|-      -.|.+.+|..+.  +.-+.+++|......+.+.-+.   ..++.+..
T Consensus       144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r  221 (494)
T 1bpo_A          144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVR  221 (494)
T ss_dssp             CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred             cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence            2211                1222221      236678898885  5667778886655444443221   23444433


Q ss_pred             ---CCcEEEEEcCCC---ce------eeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 ---DKSLRLYLAHQG---HS------RDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 ---d~~v~v~d~~~~---~~------~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                         .+.++|-++...   ..      ...+..  .......++..|+.-..+..-+.-|.+++||+.|+.++
T Consensus       222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i  293 (494)
T 1bpo_A          222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI  293 (494)
T ss_dssp             STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred             cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence               268888888542   11      111111  12345667888887777877888999999999999876

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.11  E-value=0.037  Score=39.25  Aligned_cols=178  Identities=9%  Similarity=0.033  Sum_probs=90.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE-Eecc-CCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS-YDIR-QLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~-~d~~-~~~   79 (198)
                      .+..+.+.++++.++.+ .++.|  |... .++.-..+.. .....+..+.+.|++..+++ + .++.++. .|-. ..-
T Consensus       123 ~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~~~~-~~~~~~~~~~~~~~~~~~~~-g-~~G~~~~S~d~gG~tW  196 (327)
T 2xbg_A          123 SPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQALVQ-EAIGVMRNLNRSPSGEYVAV-S-SRGSFYSTWEPGQTAW  196 (327)
T ss_dssp             CEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEEEEC-SCCCCEEEEEECTTSCEEEE-E-TTSSEEEEECTTCSSC
T ss_pred             CeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEEeec-CCCcceEEEEEcCCCcEEEE-E-CCCcEEEEeCCCCCce
Confidence            35667777677766655 45543  3332 3433333322 22346788999998776654 4 4444443 3321 100


Q ss_pred             Ccc-----------ccccCceEEEecCCCcEEEEEccCCCcceeeec----CCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758          80 SPL-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGREFVAGGYDKSLRL  144 (198)
Q Consensus        80 ~~~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~sp~~~~l~~~~~d~~v~v  144 (198)
                      ..+           ....+..+...+.+|.++..+... ++.-..+.    .....+..+++.|+++.++++. ++.+ +
T Consensus       197 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~  273 (327)
T 2xbg_A          197 EPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-L  273 (327)
T ss_dssp             EEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-E
T ss_pred             eECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-E
Confidence            000           011122233444566665553111 11111111    1223578899998887776654 5656 4


Q ss_pred             EEcCCCceeeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758         145 YLAHQGHSRDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKA  190 (198)
Q Consensus       145 ~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~  190 (198)
                      +..+.++.-.....  .....+..+.|.++++ ++.++.+|.|.-++-
T Consensus       274 ~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          274 CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT  320 (327)
T ss_dssp             EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred             EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence            45555544333321  1235678888876665 445567898877654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.06  E-value=0.045  Score=39.37  Aligned_cols=62  Identities=16%  Similarity=0.123  Sum_probs=41.1

Q ss_pred             cceEEEEEc-------cCCCEEEEeecCCcEEEEEcCCC-cee--eEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758         119 SAVTSVDYS-------PTGREFVAGGYDKSLRLYLAHQG-HSR--DIYHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       119 ~~i~~~~~s-------p~~~~l~~~~~d~~v~v~d~~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      .....++|.       .+|+++++.-..+.|...++... +..  ..+..+....+..+++.|||.++++..
T Consensus       259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            346778883       56777777666778888888753 222  223222245789999999998766553

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.96  E-value=0.034  Score=40.06  Aligned_cols=115  Identities=17%  Similarity=0.184  Sum_probs=66.7

Q ss_pred             ceeEEEECCCCceEEEee---CC------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC
Q psy8758           3 HVTHTVWSLDNKFVISAS---DE------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED   67 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~---~d------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d   67 (198)
                      ..+++.+.++|++.++..   .|            ..-++|.+..++ ...+..  .-...+.++|+||++.++++-+..
T Consensus       166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~~~~~~--~l~~pNGia~spDg~~lYvadt~~  242 (355)
T 3sre_A          166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-VRVVAE--GFDFANGINISPDGKYVYIAELLA  242 (355)
T ss_dssp             SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-CEEEEE--EESSEEEEEECTTSSEEEEEEGGG
T ss_pred             CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-EEEeec--CCcccCcceECCCCCEEEEEeCCC
Confidence            467888889998776643   11            123444443333 222221  123458999999999998877677


Q ss_pred             ccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecC-CcEEEE
Q psy8758          68 FNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYD-KSLRLY  145 (198)
Q Consensus        68 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d-~~v~v~  145 (198)
                      +.|+.|++...                  +.+         ...+.+ ........+++.+ +|++.+++..+ +.|..|
T Consensus       243 ~~I~~~~~~~~------------------g~l---------~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~  294 (355)
T 3sre_A          243 HKIHVYEKHAN------------------WTL---------TPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFY  294 (355)
T ss_dssp             TEEEEEEECTT------------------SCE---------EEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSC
T ss_pred             CeEEEEEECCC------------------CcE---------ecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEE
Confidence            88888887532                  111         001112 1134567788988 58877766533 344444


Q ss_pred             EcC
Q psy8758         146 LAH  148 (198)
Q Consensus       146 d~~  148 (198)
                      +..
T Consensus       295 ~P~  297 (355)
T 3sre_A          295 DAE  297 (355)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            443

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=96.95  E-value=0.059  Score=38.72  Aligned_cols=58  Identities=10%  Similarity=0.125  Sum_probs=36.9

Q ss_pred             ceEEEEEccCCCEEEEeecCCcEEEEEcCCCce------eeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS------RDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      ....++| .+|..+++.-..+.|...++.....      ...+. .....+..+++.|||.++++.
T Consensus       269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~~  332 (352)
T 2ism_A          269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVTT  332 (352)
T ss_dssp             CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEEE
T ss_pred             CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCcEEEEE
Confidence            3456777 4676666666667788887764331      11221 223578999999999876654

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.88  E-value=0.06  Score=37.78  Aligned_cols=101  Identities=11%  Similarity=0.074  Sum_probs=52.2

Q ss_pred             ceEEEecC-C-----CcEEEEEccCCCcce--eeecCCCcceEEEEEccCCCEEEEeecCC-----cEEEEEcCCCceee
Q psy8758          88 MTSAAANE-D-----FNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAGGYDK-----SLRLYLAHQGHSRD  154 (198)
Q Consensus        88 ~~~~~~~~-~-----~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~d~-----~v~v~d~~~~~~~~  154 (198)
                      .+++.|+. +     ..+..||+.+ ..-.  ..+.........+.+  +++.++.|+.++     .+.+||+.+.+...
T Consensus       150 ~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  226 (315)
T 4asc_A          150 LVYVIGGKGSDRKCLNKMCVYDPKK-FEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP  226 (315)
T ss_dssp             EEEEECCBCTTSCBCCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred             EEEEEeCCCCCCcccceEEEEeCCC-CeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence            45666654 2     4588888875 2211  111111111222222  667778887654     58899998876544


Q ss_pred             EEeccCc-ccEEEEEEcCCCCEEEEecCC--------------CeEEEEecCCC
Q psy8758         155 IYHTKRM-QHVTHTVWSLDNKFVISASDE--------------MNLRVWKAHAS  193 (198)
Q Consensus       155 ~~~~~~~-~~v~~~~~s~~~~~l~~~~~d--------------g~v~~w~~~~~  193 (198)
                      .-..... .....+.  -++++++.|+.+              +.+.+||+++.
T Consensus       227 ~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  278 (315)
T 4asc_A          227 FEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK  278 (315)
T ss_dssp             ECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred             CCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence            3211111 1111222  256766666643              24778888765

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.80  E-value=0.069  Score=37.37  Aligned_cols=174  Identities=12%  Similarity=0.137  Sum_probs=84.3

Q ss_pred             CCceEEEeeC----C-----CeEEEEEccCCceeeeeeeeeec-CceeeEEeCCCCCeEEEEecCC-----ccEEEEecc
Q psy8758          12 DNKFVISASD----E-----MNLRVWKAHASEKLGPIRKVVMS-LRSNMVSWNPMEAFVFTAANED-----FNLYSYDIR   76 (198)
Q Consensus        12 ~~~~l~~~~~----d-----~~i~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~   76 (198)
                      +++.++.|+.    +     ..+.+||+.+.+- ..+...... ..-..+.+  ++ .+++.|+.+     ..+..||..
T Consensus        70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~  145 (308)
T 1zgk_A           70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW-SPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPE  145 (308)
T ss_dssp             TTEEEEECCEEEETTEEEECCCEEEEETTTTEE-EECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETT
T ss_pred             CCEEEEECCCcCCCCCCeecceEEEECCCCCeE-eECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCC
Confidence            4566666654    2     3577888876542 222111111 11112222  34 444444332     357888876


Q ss_pred             CCCC----cc---------ccccCceEEEecCC-----CcEEEEEccCCCcce--eeecCCCcceEEEEEccCCCEEEEe
Q psy8758          77 QLNS----PL---------NVHKDMTSAAANED-----FNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        77 ~~~~----~~---------~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                      +..-    .+         ....+.+++.|+.+     ..+..||+.+ .+-.  ..+.........+.+  +++.++.|
T Consensus       146 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G  222 (308)
T 1zgk_A          146 RDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPER-NEWRMITAMNTIRSGAGVCVL--HNCIYAAG  222 (308)
T ss_dssp             TTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred             CCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCC-CeEeeCCCCCCccccceEEEE--CCEEEEEe
Confidence            4321    00         11123455555543     4578888875 2211  111111111222233  67777888


Q ss_pred             ecC-----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         137 GYD-----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       137 ~~d-----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                      +.+     ..+.+||+.+.+.......... .....+.  -++++++.|+.+     ..+.+||+.+.+
T Consensus       223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence            764     5699999988765433211110 1111222  266777777643     468889987653

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.76  E-value=0.2  Score=42.04  Aligned_cols=144  Identities=13%  Similarity=0.128  Sum_probs=86.6

Q ss_pred             CceEEEee----------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758          13 NKFVISAS----------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus        13 ~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      ..++++|+          ..|.|.+|++..+ .++.+......+++.+++-- +| +++++  -...+++|++...    
T Consensus       844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~-~g-~Lla~--ig~~l~vy~l~~~----  914 (1158)
T 3ei3_A          844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEF-NG-KLLAS--INSTVRLYEWTTE----  914 (1158)
T ss_dssp             CCEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEE-TT-EEEEE--ETTEEEEEEECTT----
T ss_pred             CEEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeee-CC-EEEEE--cCCEEEEEECCCC----
Confidence            35787775          3478999998743 45555555567778877633 24 45443  3467888887642    


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE--cCCCceeeEEeccC
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL--AHQGHSRDIYHTKR  160 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d--~~~~~~~~~~~~~~  160 (198)
                                                +.+..-..+-..+..+.....+.+++.|..-..+.++.  ...++.........
T Consensus       915 --------------------------~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~  968 (1158)
T 3ei3_A          915 --------------------------KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFN  968 (1158)
T ss_dssp             --------------------------SCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCS
T ss_pred             --------------------------ceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecc
Confidence                                      11110000011122233333577888888766666654  44455544444455


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ...++++.+-.++ .++.+..+|.+.+...+.
T Consensus       969 ~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~  999 (1158)
T 3ei3_A          969 PNWMSAVEILDDD-NFLGAENAFNLFVCQKDS  999 (1158)
T ss_dssp             CBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred             cccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence            6788888887654 666788899999987754

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.74  E-value=0.074  Score=36.95  Aligned_cols=175  Identities=13%  Similarity=0.168  Sum_probs=86.5

Q ss_pred             CCceEEEee-CC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCC-
Q psy8758          12 DNKFVISAS-DE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLN-   79 (198)
Q Consensus        12 ~~~~l~~~~-~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~-   79 (198)
                      ++..++.|+ .+     ..+.+||+.+.+- ..+...... .........++ .+++.|+.+     ..+..||..+.. 
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~-r~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~d~~~~~~   90 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-SFLPSITRK-RRYVASVSLHD-RIYVIGGYDGRSRLSSVECLDYTADED   90 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEE-EECCCCSSC-CBSCEEEEETT-EEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeE-EeCCCCChh-hccccEEEECC-EEEEEcCCCCCccCceEEEEECCCCCC
Confidence            455666666 33     3678889876642 222211111 11111122233 444545433     458889987654 


Q ss_pred             --Cccc-------------cccCceEEEecCC-----CcEEEEEccCCCcc--eeeecCCCcceEEEEEccCCCEEEEee
Q psy8758          80 --SPLN-------------VHKDMTSAAANED-----FNLYSYDIRQLNSP--LNVHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        80 --~~~~-------------~~~~~~~~~~~~~-----~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                        -...             ...+.+++.|+.+     ..+..||+.+ .+-  +............+.+  +++.++.|+
T Consensus        91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG  167 (301)
T 2vpj_A           91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNI-DQWSMLGDMQTAREGAGLVVA--SGVIYCLGG  167 (301)
T ss_dssp             CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT-TEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred             CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCC-CeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence              1100             1123345555533     3577888775 222  1112111111222222  677777877


Q ss_pred             cC-----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         138 YD-----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       138 ~d-----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                      .+     ..+.+||+.+.+....-..... .....+.  -++++++.|+.+     +.+.+||+.+.+
T Consensus       168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  233 (301)
T 2vpj_A          168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDS  233 (301)
T ss_dssp             BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence            54     4689999988765443211111 1111222  256777777653     468899987653

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.46  E-value=0.12  Score=35.96  Aligned_cols=173  Identities=12%  Similarity=0.109  Sum_probs=84.0

Q ss_pred             CceEEEeeC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC----ccEEEEeccCCCC------
Q psy8758          13 NKFVISASD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED----FNLYSYDIRQLNS------   80 (198)
Q Consensus        13 ~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~~~------   80 (198)
                      +..++.|+.  ...+.+||..+.+-. .+........-.++.. -+ ..+++.|+.+    ..+..||..+..-      
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~   88 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWT-DIRCPFEKRRDAACVF-WD-NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP   88 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEE-ECCCCSCCCBSCEEEE-ET-TEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEe-cCCCCCcccceeEEEE-EC-CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence            345556654  357888998776422 2221111110111211 23 3455555443    5678888765431      


Q ss_pred             --c-----cccccCceEEEecCC------CcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeec-------
Q psy8758          81 --P-----LNVHKDMTSAAANED------FNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGY-------  138 (198)
Q Consensus        81 --~-----~~~~~~~~~~~~~~~------~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~-------  138 (198)
                        .     .....+.+++.|+.+      ..+..||+.+ ..-..  .+.........+.  -+++.++.|+.       
T Consensus        89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~  165 (306)
T 3ii7_A           89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRT-ESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSG  165 (306)
T ss_dssp             SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTT-TEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTC
T ss_pred             CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCC-CceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcc
Confidence              0     111233456666544      4588888876 22211  1111111112222  25677777764       


Q ss_pred             --CCcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCC
Q psy8758         139 --DKSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHAS  193 (198)
Q Consensus       139 --d~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~  193 (198)
                        -..+.+||+.+.+....-..... ..-..+.+  ++++++.|+.+     ..+.+||+.+.
T Consensus       166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~  226 (306)
T 3ii7_A          166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN  226 (306)
T ss_dssp             EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred             cccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence              34588999988765443211111 11111222  66676666543     45888988764

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.39  E-value=0.29  Score=41.90  Aligned_cols=180  Identities=8%  Similarity=0.147  Sum_probs=104.8

Q ss_pred             EECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---ccc
Q psy8758           8 VWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---LNV   84 (198)
Q Consensus         8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~~~   84 (198)
                      -.+|..+.+|.-. ..+++|||+++...+   +.+....+|.--.|-.+...-++   .+..|+.|++.....+   +..
T Consensus        72 IMnP~~~iiALra-g~~lQiFnl~~k~kl---ks~~~~e~VvfWkWis~~~l~lV---T~~aVyHW~~~~~s~P~k~fdR  144 (1630)
T 1xi4_A           72 IMNPASKVIALKA-GKTLQIFNIEMKSKM---KAHTMTDDVTFWKWISLNTVALV---TDNAVYHWSMEGESQPVKMFDR  144 (1630)
T ss_pred             ccCCCcceEEEec-CCeEEEeehHHhhhh---cccccCCCceEEEecCCCeeEEE---cCCeEEEeccCCCCccHHHHhc
Confidence            3567777776654 678999999877644   44444566777777655444443   3578999999643222   222


Q ss_pred             cc----------------CceEEEe------cCCCcEEEEEccCCCcceeeecCCCcceEEEEEc--cC-CCEEEEeec-
Q psy8758          85 HK----------------DMTSAAA------NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS--PT-GREFVAGGY-  138 (198)
Q Consensus        85 ~~----------------~~~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~s--p~-~~~l~~~~~-  138 (198)
                      |.                ...+++|      .-.|.+.+|..+.  +.-+.+++|......+...  +. ...++.+.. 
T Consensus       145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~  222 (1630)
T 1xi4_A          145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG  222 (1630)
T ss_pred             chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEec
Confidence            21                1222222      2347788888875  4445556665544333332  11 223332222 


Q ss_pred             --CCcEEEEEcCCC---cee------eEEecc--CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         139 --DKSLRLYLAHQG---HSR------DIYHTK--RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       139 --d~~v~v~d~~~~---~~~------~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                        .+.++|-++...   ...      ..+.++  ......++..|+.-..+..-+.-|.++++|+.||.++
T Consensus       223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i  293 (1630)
T 1xi4_A          223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI  293 (1630)
T ss_pred             CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence              267888887542   111      111111  1234556777877777777788999999999999876

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.36  E-value=0.23  Score=38.08  Aligned_cols=87  Identities=8%  Similarity=0.023  Sum_probs=55.9

Q ss_pred             cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEE
Q psy8758          45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSV  124 (198)
Q Consensus        45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~  124 (198)
                      ......+..+|||++++++|..+.++.++|.+.....+...               +.+.+  .......+ ......-.
T Consensus       322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k---------------~~~~~--~~~~ae~e-~GlGPlHt  383 (638)
T 3sbq_A          322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK---------------LADPR--DVIVGEPE-LGLGPLHT  383 (638)
T ss_dssp             SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC---------------CSCGG--GGEEECCB-CCSCEEEE
T ss_pred             CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc---------------ccCcc--cceEeecc-CCCcccEE
Confidence            34456789999999999998889999999987532211100               00111  01112222 23345668


Q ss_pred             EEccCCCEEEEeecCCcEEEEEcCC
Q psy8758         125 DYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus       125 ~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      +|.++|.-..+--.|..|.-|++..
T Consensus       384 ~Fd~~G~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          384 TFDGRGNAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             EECSSSEEEEEETTTTEEEEEEHHH
T ss_pred             EECCCCceEeeeeecceEEEEeccH
Confidence            8999995555556799999999975

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.33  E-value=0.15  Score=35.61  Aligned_cols=175  Identities=10%  Similarity=0.067  Sum_probs=84.5

Q ss_pred             CCceEEEeeC----CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC----C-----ccEEEEeccCC
Q psy8758          12 DNKFVISASD----EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE----D-----FNLYSYDIRQL   78 (198)
Q Consensus        12 ~~~~l~~~~~----d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----d-----~~i~~~d~~~~   78 (198)
                      ++..++.|+.    -..+.+||..+.+- ..+........-.+++. .+ ..+++.|+.    +     ..+..||..+.
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~  100 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-LRLADLQVPRSGLAGCV-VG-GLLYAVGGRNNSPDGNTDSSALDCYNPMTN  100 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEE-ET-TEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeE-eECCCCCcccccceEEE-EC-CEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence            5566666663    23688889876642 22221111111112222 13 444444543    2     35788887643


Q ss_pred             CC----cc---------ccccCceEEEecCC-----CcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeec
Q psy8758          79 NS----PL---------NVHKDMTSAAANED-----FNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        79 ~~----~~---------~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                      .-    .+         ....+.+++.|+.+     ..+..||+.+ .+-..  .+.........+.+  +++.++.|+.
T Consensus       101 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~  177 (308)
T 1zgk_A          101 QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPER-DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF  177 (308)
T ss_dssp             EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred             eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCC-CeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence            21    00         11123445555533     3577888775 22111  11111111222223  5677777776


Q ss_pred             C-----CcEEEEEcCCCceeeEEeccC-cccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         139 D-----KSLRLYLAHQGHSRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       139 d-----~~v~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                      +     ..+.+||+.+.+....-.... ......+.+  ++++++.|+.+     ..+.+||+.+.+
T Consensus       178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~  242 (308)
T 1zgk_A          178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET  242 (308)
T ss_dssp             CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence            4     468999998765543221111 111122222  66777777654     568899987643

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.31  E-value=0.16  Score=35.66  Aligned_cols=101  Identities=11%  Similarity=0.113  Sum_probs=50.9

Q ss_pred             ceEEEecC------CCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecC-----CcEEEEEcCCCceee
Q psy8758          88 MTSAAANE------DFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSRD  154 (198)
Q Consensus        88 ~~~~~~~~------~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d-----~~v~v~d~~~~~~~~  154 (198)
                      .+++.|+.      ...+..||+.+ .+-..  ...........+.+  +++.++.|+.+     ..+.+||+.+.+...
T Consensus       160 ~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  236 (318)
T 2woz_A          160 MIYCLGGKTDDKKCTNRVFIYNPKK-GDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEV  236 (318)
T ss_dssp             EEEEECCEESSSCBCCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred             EEEEEcCCCCCCCccceEEEEcCCC-CEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence            45555543      24588889876 22211  11111111122222  56777777653     357789988776543


Q ss_pred             EEeccC-cccEEEEEEcCCCCEEEEecCC--------------CeEEEEecCCC
Q psy8758         155 IYHTKR-MQHVTHTVWSLDNKFVISASDE--------------MNLRVWKAHAS  193 (198)
Q Consensus       155 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~d--------------g~v~~w~~~~~  193 (198)
                      .-.... ......+  ..++++++.|+.+              ..+.+||+.+.
T Consensus       237 ~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  288 (318)
T 2woz_A          237 MTEFPQERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK  288 (318)
T ss_dssp             CCCCSSCCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred             CCCCCCcccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence            321111 0111112  2356766666543              45888888764

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.27  E-value=0.013  Score=41.96  Aligned_cols=66  Identities=14%  Similarity=0.122  Sum_probs=40.1

Q ss_pred             CEEEEe-ecCCcEEEEEcCCCceeeEEeccC---cccEEE---EEE-c----CCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         131 REFVAG-GYDKSLRLYLAHQGHSRDIYHTKR---MQHVTH---TVW-S----LDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       131 ~~l~~~-~~d~~v~v~d~~~~~~~~~~~~~~---~~~v~~---~~~-s----~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..++.. ..||.+..++..+|.....+....   ..++..   ... .    ..+..+++++.+|.+...|+++|+.+
T Consensus        57 ~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~  134 (339)
T 2be1_A           57 ETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII  134 (339)
T ss_dssp             EEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred             cEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence            334343 579999999988886554432211   112211   000 0    13457788899999999999998875

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.22  E-value=0.19  Score=35.82  Aligned_cols=55  Identities=11%  Similarity=0.090  Sum_probs=27.7

Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC------CeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE------MNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~v~~w~~~~~~~~  196 (198)
                      .+.+||+.+.+....-.... ......+...++++++.|+.+      ..|.++++++++.+
T Consensus       286 ~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~  346 (357)
T 2uvk_A          286 STDIHLWHNGKWDKSGELSQ-GRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVT  346 (357)
T ss_dssp             CCEEEECC---CEEEEECSS-CCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred             eEEEEecCCCceeeCCCCCC-CcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence            57899998766544321111 111112233467777777654      24667788887653

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.15  E-value=0.19  Score=34.94  Aligned_cols=175  Identities=15%  Similarity=0.161  Sum_probs=83.7

Q ss_pred             CCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCCC--
Q psy8758          12 DNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLNS--   80 (198)
Q Consensus        12 ~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~--   80 (198)
                      ++..++.|+.+    ..+..||+.+.+- ..+........-.+++. - +..+++.|+.+     ..+..||..+..-  
T Consensus        15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~   91 (302)
T 2xn4_A           15 PKLMVVVGGQAPKAIRSVECYDFKEERW-HQVAELPSRRCRAGMVY-M-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS   91 (302)
T ss_dssp             CEEEEEECCBSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-E-TTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEECCCCCCCCCcEEEEcCcCCcE-eEcccCCcccccceEEE-E-CCEEEEEeCcCCCccccceEEECCCCCceee
Confidence            34566666643    3578888876542 22221111100111221 1 34455555433     3578888764331  


Q ss_pred             ------c-----cccccCceEEEecCCC-----cEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecC---
Q psy8758          81 ------P-----LNVHKDMTSAAANEDF-----NLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYD---  139 (198)
Q Consensus        81 ------~-----~~~~~~~~~~~~~~~~-----~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d---  139 (198)
                            .     .....+.+++.|+.++     .+..||+.+ .+-..  .+.........+.  -+++.++.|+.+   
T Consensus        92 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~  168 (302)
T 2xn4_A           92 VANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKS-NEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVAS  168 (302)
T ss_dssp             ECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTT-TEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTT
T ss_pred             CCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCC-CeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCC
Confidence                  0     0111234556665443     467788765 22111  1111111112222  256777777643   


Q ss_pred             ----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         140 ----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       140 ----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                          ..+.+||+.+.+....-..... .....+.  -++++++.|+.+     +.+.+||+.+.+
T Consensus       169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred             CccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence                4588999988765443211111 1111222  256777777654     468899987643

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.03  E-value=0.23  Score=34.82  Aligned_cols=170  Identities=10%  Similarity=0.078  Sum_probs=82.1

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeee-cCceeeEEeCCCCCeEEEEec-----C-C----ccEEEEeccCCCC---
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVM-SLRSNMVSWNPMEAFVFTAAN-----E-D----FNLYSYDIRQLNS---   80 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-----~-d----~~i~~~d~~~~~~---   80 (198)
                      +++.|+  ..+..||..+++-..  ..... ..+........++..++..|.     . .    ..+..||..+..-   
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~   82 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC--ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM   82 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE--EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred             EEEEcC--CceEEECCCCCeEec--CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence            344555  478999998776322  11111 112222233345555555441     1 1    1267788765331   


Q ss_pred             -cc---------ccccCceEEEecCC--------CcEEEEEccCCCcce--eeecCCCcceEEEEEccCCCEEEEeec-C
Q psy8758          81 -PL---------NVHKDMTSAAANED--------FNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAGGY-D  139 (198)
Q Consensus        81 -~~---------~~~~~~~~~~~~~~--------~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~-d  139 (198)
                       .+         ....+.+++.|+.+        ..+..||+.+ .+-.  ..+....... +++. -+++.++.|+. +
T Consensus        83 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~  159 (315)
T 4asc_A           83 PPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS-FKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGS  159 (315)
T ss_dssp             CCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTT-TEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCT
T ss_pred             CCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCC-CcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCC
Confidence             00         11123455555532        4588888875 2211  1111111111 2222 35677777776 2


Q ss_pred             -----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCCC-----eEEEEecCCC
Q psy8758         140 -----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDEM-----NLRVWKAHAS  193 (198)
Q Consensus       140 -----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg-----~v~~w~~~~~  193 (198)
                           ..+.+||..+.+....-..... .....+.  -++++++.|+.++     .+.+||+.+.
T Consensus       160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             CCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCC
Confidence                 4689999988754432211110 1111222  2667777776543     5888888764

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=95.93  E-value=0.35  Score=36.13  Aligned_cols=109  Identities=11%  Similarity=0.227  Sum_probs=56.8

Q ss_pred             ceeeEEeCCCCCeEEEEecCC-ccEEEEeccCCCCccccccCceEEEecCCCcEE-EEEccCCCcceeeecCCCcceEEE
Q psy8758          47 RSNMVSWNPMEAFVFTAANED-FNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLY-SYDIRQLNSPLNVHKDMTSAVTSV  124 (198)
Q Consensus        47 ~v~~~~~~~~~~~~~~~~~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~i~~~  124 (198)
                      ....++|.|+++.+++  ... +.|+.++....                   ... +-++..   .. ........+..|
T Consensus        28 ~P~~~a~~pdG~l~V~--e~~gg~I~~~~~~~g-------------------~~~~~~~~~~---~~-~~~~g~~Gllgi   82 (454)
T 1cru_A           28 KPHALLWGPDNQIWLT--ERATGKILRVNPESG-------------------SVKTVFQVPE---IV-NDADGQNGLLGF   82 (454)
T ss_dssp             SEEEEEECTTSCEEEE--ETTTCEEEEECTTTC-------------------CEEEEEECTT---CC-CCTTSSCSEEEE
T ss_pred             CceEEEEcCCCcEEEE--EcCCCEEEEEECCCC-------------------cEeEEecCCc---cc-cccCCCCceeEE
Confidence            4578999999986654  344 45777664321                   111 111110   00 001134567899


Q ss_pred             EEccC---CCEEEEee-c------------CCcEEEEEcCCC--ce---eeE---EeccCcccEEEEEEcCCCCEEEEec
Q psy8758         125 DYSPT---GREFVAGG-Y------------DKSLRLYLAHQG--HS---RDI---YHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       125 ~~sp~---~~~l~~~~-~------------d~~v~v~d~~~~--~~---~~~---~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      +|+|+   +..|..+. .            ...|.-++....  ..   ...   +..........|+|.|||.++++.+
T Consensus        83 a~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A           83 AFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             EECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             EECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence            99995   44444332 2            235666655432  11   111   1111223578999999999766644

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=95.85  E-value=0.37  Score=35.85  Aligned_cols=189  Identities=10%  Similarity=0.013  Sum_probs=110.5

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-eeee--ecCceeeEEeCCCCCeEEEEec------CCccEEEE
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-RKVV--MSLRSNMVSWNPMEAFVFTAAN------EDFNLYSY   73 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~~~~~~~------~d~~i~~~   73 (198)
                      +|.--.|-.+. .|+..+ +..|+-|++.....+..+ ..+.  ....|..-..+++.++++.+|-      -.|.+.+|
T Consensus       107 ~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY  184 (494)
T 1bpo_A          107 DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY  184 (494)
T ss_dssp             CCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred             CceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence            34444454333 344343 457999999754333332 2221  2345666677899999887762      23678889


Q ss_pred             eccCCC-CccccccC--------------ceEEEecC---CCcEEEEEccCC--Ccc-e-----eeec---CCCcceEEE
Q psy8758          74 DIRQLN-SPLNVHKD--------------MTSAAANE---DFNLYSYDIRQL--NSP-L-----NVHK---DMTSAVTSV  124 (198)
Q Consensus        74 d~~~~~-~~~~~~~~--------------~~~~~~~~---~~~i~~~d~~~~--~~~-~-----~~~~---~~~~~i~~~  124 (198)
                      ..+... +.+++|..              .+++.+..   .+++++.++..+  +.+ .     ..+.   ...+-.-+|
T Consensus       185 S~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam  264 (494)
T 1bpo_A          185 SVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM  264 (494)
T ss_dssp             ESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE
T ss_pred             eccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE
Confidence            887654 33444422              22333322   378999998643  111 1     1111   112335678


Q ss_pred             EEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         125 DYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       125 ~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      ..|+.-..+..-..-|.+++||+.++.++..-+.. ...|...+-+....=++.....|.|.--.++...
T Consensus       265 qvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs-~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~  333 (494)
T 1bpo_A          265 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN  333 (494)
T ss_dssp             EEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred             EecccCCEEEEEecCceEEEEecccceeeeeeccc-CCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence            88888778888888999999999999998775322 3455554444444444445577777665555443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=95.74  E-value=0.33  Score=34.37  Aligned_cols=178  Identities=8%  Similarity=0.061  Sum_probs=87.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee--eecCceeeEEeCCCCCeEEEEecCCccEEEEe-----
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV--VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD-----   74 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d-----   74 (198)
                      ..+.++.|.+++..++++ ..|.| +...+.++.-..+...  .....+..+.|.|  ..+++++ ..+.|+.-.     
T Consensus        36 ~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g-~~g~i~~S~DgG~t  110 (327)
T 2xbg_A           36 ATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVG-EPPIMLHTTDGGQS  110 (327)
T ss_dssp             SCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEE-ETTEEEEESSTTSS
T ss_pred             CcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEE-CCCeEEEECCCCCC
Confidence            357889998877777754 56654 2233334322222211  1133577888876  3444544 445443321     


Q ss_pred             --ccCCCCc-------ccc-ccCceEEEecCCCcEEEEEccCCCcc-eeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          75 --IRQLNSP-------LNV-HKDMTSAAANEDFNLYSYDIRQLNSP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        75 --~~~~~~~-------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                        .......       +.. ..+.+++. +.++.+  |.....++. ..........+..+++.|++++++.+...+..+
T Consensus       111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~  187 (327)
T 2xbg_A          111 WSQIPLDPKLPGSPRLIKALGNGSAEMI-TNVGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS  187 (327)
T ss_dssp             CEECCCCTTCSSCEEEEEEEETTEEEEE-ETTCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred             ceECccccCCCCCeEEEEEECCCCEEEE-eCCccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence              1100000       000 11122232 334433  222221221 122233455788999999988887765433333


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      -.|- .+..-..........+..+.++++++.++. +.+|.+++.+
T Consensus       188 S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~  231 (327)
T 2xbg_A          188 TWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSD  231 (327)
T ss_dssp             EECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred             EeCC-CCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEec
Confidence            3332 122222222344567889999999886654 4567776663

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=95.72  E-value=0.32  Score=34.10  Aligned_cols=65  Identities=15%  Similarity=0.280  Sum_probs=36.2

Q ss_pred             cCCCEEEEeec------CCcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758         128 PTGREFVAGGY------DKSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE  194 (198)
Q Consensus       128 p~~~~l~~~~~------d~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~  194 (198)
                      .+++.++.|+.      -..+.+||+.+.+....-..... .....+.  -++++++.|+.+     ..+.+||+.+.+
T Consensus       157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            46777777764      24689999988765443211111 1111222  256766666543     357788887643

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=95.61  E-value=0.87  Score=38.34  Aligned_cols=93  Identities=13%  Similarity=0.095  Sum_probs=58.1

Q ss_pred             EEEEEccCCCcceeeecCC-CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC-----
Q psy8758          99 LYSYDIRQLNSPLNVHKDM-TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD-----  172 (198)
Q Consensus        99 i~~~d~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~-----  172 (198)
                      |++.+... ...+..+... ...|...+.+.  ..++.++ .+.+.++.+..++........-...|.++++.|.     
T Consensus       494 Irli~~~~-~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~  569 (1158)
T 3ei3_A          494 VRLVSQEP-KALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG  569 (1158)
T ss_dssp             EEEEESSS-CCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred             EEEEECCC-CeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence            55566543 2334444332 33566666543  4555554 6788888887665433222223468999999863     


Q ss_pred             -CCEEEEecC-CCeEEEEecCCCcc
Q psy8758         173 -NKFVISASD-EMNLRVWKAHASEK  195 (198)
Q Consensus       173 -~~~l~~~~~-dg~v~~w~~~~~~~  195 (198)
                       +++++.|.. |++++++++.+.+.
T Consensus       570 ~s~~~aVg~~~d~tv~I~sL~~l~~  594 (1158)
T 3ei3_A          570 LSPLCAIGLWTDISARILKLPSFEL  594 (1158)
T ss_dssp             CCSEEEEEETTTTEEEEEETTTCCE
T ss_pred             cccEEEEEECCCCEEEEEECCCCCe
Confidence             368898986 99999999987554

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=95.48  E-value=0.4  Score=33.64  Aligned_cols=52  Identities=12%  Similarity=0.174  Sum_probs=28.5

Q ss_pred             ECCCCceEEEee--CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC
Q psy8758           9 WSLDNKFVISAS--DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED   67 (198)
Q Consensus         9 ~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d   67 (198)
                      |++++.+++...  .++.|...+.+ +.....+...      .+--+++++..|+.+...+
T Consensus        21 ~~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~------~~~~i~~~g~~Iyy~~~~~   74 (302)
T 3s25_A           21 FCESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND------TAMYINADKNYVYYVRNNN   74 (302)
T ss_dssp             EEEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE------EEEEEEECSSEEEEEEECC
T ss_pred             EEEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC------ceeeEEEcCCEEEEEECCC
Confidence            345666666553  34556555553 3333444321      1235678899998875443

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=95.32  E-value=0.19  Score=38.53  Aligned_cols=94  Identities=11%  Similarity=0.036  Sum_probs=61.6

Q ss_pred             cEEEEEccC----CCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCCC------ce-----eeEEeccCc
Q psy8758          98 NLYSYDIRQ----LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQG------HS-----RDIYHTKRM  161 (198)
Q Consensus        98 ~i~~~d~~~----~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~------~~-----~~~~~~~~~  161 (198)
                      .+.+.|.+.    .......+ .-......+..+|||++++.++. +.++.++|+..-      +.     .......-.
T Consensus       299 gv~ViD~~~~~~~~~~~~~~i-P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G  377 (638)
T 3sbq_A          299 KTPVLDGRKKDGKDSKFTRYV-PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG  377 (638)
T ss_dssp             CCCEEECSCBTTBCCSSEEEE-EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred             CeeEEccccccccCCceEEEE-eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence            366677654    11222222 23344567899999998887764 789999999842      11     001111223


Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      -.....+|.++|....+.--|..|.-|++..
T Consensus       378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             SCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred             CcccEEEECCCCceEeeeeecceEEEEeccH
Confidence            5678899999996556667899999999864

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.31  E-value=0.63  Score=34.86  Aligned_cols=54  Identities=11%  Similarity=0.067  Sum_probs=33.3

Q ss_pred             ceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeee---e-------ecCceeeEEeCCC
Q psy8758           3 HVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKV---V-------MSLRSNMVSWNPM   56 (198)
Q Consensus         3 ~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~---~-------~~~~v~~~~~~~~   56 (198)
                      .-..|+|.|+|+ .++++...|.|++++.........+...   .       .......++|+|+
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~   79 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN   79 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence            346899999996 5666678899999975322111111111   0       1345678999986

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=95.21  E-value=0.56  Score=33.66  Aligned_cols=66  Identities=15%  Similarity=0.152  Sum_probs=42.0

Q ss_pred             ceEEEEEcc-------CCCEEEEeecCCcEEEEEcCCCceeeE--EeccCcccEEEEEEcCCCCEEEEec-CCCeE
Q psy8758         120 AVTSVDYSP-------TGREFVAGGYDKSLRLYLAHQGHSRDI--YHTKRMQHVTHTVWSLDNKFVISAS-DEMNL  185 (198)
Q Consensus       120 ~i~~~~~sp-------~~~~l~~~~~d~~v~v~d~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v  185 (198)
                      .+..++|.+       +|+++++.-..+.|...++..++....  +.......+..+++.|||.++++.. .+|.|
T Consensus       272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I  347 (353)
T 2g8s_A          272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL  347 (353)
T ss_dssp             CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred             CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence            456677753       466777666678888888876543322  2122235799999999999666432 34544

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.18  E-value=0.9  Score=35.92  Aligned_cols=181  Identities=7%  Similarity=0.068  Sum_probs=89.8

Q ss_pred             CCCceEEEeeCC----CeEEEEEccCCceeeeee-e-----eeecCceeeEEeCC-CCCeEEEEecCC------ccEEEE
Q psy8758          11 LDNKFVISASDE----MNLRVWKAHASEKLGPIR-K-----VVMSLRSNMVSWNP-MEAFVFTAANED------FNLYSY   73 (198)
Q Consensus        11 ~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~~~~~~~~d------~~i~~~   73 (198)
                      .++..++.|+.+    ..+.+||..+++-.. +. .     ......-.+++..+ ++. +++.|+.+      ..+.+|
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~-~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~y  473 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDM-KNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIF  473 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEE-EECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEE
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEE-eccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEE
Confidence            355666666643    457788887664322 22 1     01111112223332 444 44444432      347888


Q ss_pred             eccCCCC--------c-----ccc-ccCceEEEecCCC--cEEEEEccCCCcceee-----ecCCCcceEEEEEccC-CC
Q psy8758          74 DIRQLNS--------P-----LNV-HKDMTSAAANEDF--NLYSYDIRQLNSPLNV-----HKDMTSAVTSVDYSPT-GR  131 (198)
Q Consensus        74 d~~~~~~--------~-----~~~-~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~-----~~~~~~~i~~~~~sp~-~~  131 (198)
                      |..+..-        .     ... ..+.+++.|+.++  .+.+||+.+ ..-...     ..........+.+..+ ++
T Consensus       474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t-~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~  552 (695)
T 2zwa_A          474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE-EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ  552 (695)
T ss_dssp             ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT-TEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred             eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC-CceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence            8765321        0     111 2445666666544  688898876 221111     1111122233556655 66


Q ss_pred             EEEEeec--C-----CcEEEEEcCCCc------eeeEEeccCccc-EEEEEEcCCCCEEEEecC--------CCeEEEEe
Q psy8758         132 EFVAGGY--D-----KSLRLYLAHQGH------SRDIYHTKRMQH-VTHTVWSLDNKFVISASD--------EMNLRVWK  189 (198)
Q Consensus       132 ~l~~~~~--d-----~~v~v~d~~~~~------~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~--------dg~v~~w~  189 (198)
                      .++.|+.  +     +.+.+||+.+..      ............ -.++....++++++.|+.        ...+.+||
T Consensus       553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd  632 (695)
T 2zwa_A          553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD  632 (695)
T ss_dssp             EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred             EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence            7777776  2     468899998877      222211000111 112223333677777763        35689999


Q ss_pred             cCCCc
Q psy8758         190 AHASE  194 (198)
Q Consensus       190 ~~~~~  194 (198)
                      +.+.+
T Consensus       633 ~~t~~  637 (695)
T 2zwa_A          633 PLSET  637 (695)
T ss_dssp             TTTTE
T ss_pred             CCCCe
Confidence            87653

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=94.39  E-value=0.31  Score=37.70  Aligned_cols=59  Identities=17%  Similarity=0.155  Sum_probs=44.1

Q ss_pred             eEEEEEccCCCEEEEeecC------------CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         121 VTSVDYSPTGREFVAGGYD------------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d------------~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .-.|+|+|.|++++.-..+            +.+.+.+..+++....+.......++.++|+||++.|+..
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence            4678999999977765432            3466677777887766655556789999999999987655

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=94.33  E-value=2.4  Score=36.74  Aligned_cols=153  Identities=10%  Similarity=0.027  Sum_probs=88.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-eeee--ecCceeeEEeCCCCCeEEEEec------CCccEEE
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-RKVV--MSLRSNMVSWNPMEAFVFTAAN------EDFNLYS   72 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~~~~~~~------~d~~i~~   72 (198)
                      ++|.--.|-.+.. |+..+ +..|.-|++.....+..+ ..+.  ....|..-.-+++.++++.+|-      -.|.+.+
T Consensus       106 e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL  183 (1630)
T 1xi4_A          106 DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL  183 (1630)
T ss_pred             CCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence            3455556654443 33333 347999999643322222 1111  2345666777889999887762      3477889


Q ss_pred             EeccCCC-CccccccC--------------ceEEEec---CCCcEEEEEccCC--Cccee------eecC---CCcceEE
Q psy8758          73 YDIRQLN-SPLNVHKD--------------MTSAAAN---EDFNLYSYDIRQL--NSPLN------VHKD---MTSAVTS  123 (198)
Q Consensus        73 ~d~~~~~-~~~~~~~~--------------~~~~~~~---~~~~i~~~d~~~~--~~~~~------~~~~---~~~~i~~  123 (198)
                      |..+... +.+.+|..              .+++.+.   ..+++++.++..+  +.+..      .+..   ..+-..+
T Consensus       184 yS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~  263 (1630)
T 1xi4_A          184 YSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA  263 (1630)
T ss_pred             eecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceE
Confidence            9887554 23333321              2222221   2378999988642  11111      1111   1223456


Q ss_pred             EEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758         124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      |..|+.-..+..-+.-|.+.+||+.++.++..-
T Consensus       264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~  296 (1630)
T 1xi4_A          264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMN  296 (1630)
T ss_pred             EEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence            777777777777788899999999999887654

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=93.58  E-value=0.83  Score=35.18  Aligned_cols=61  Identities=15%  Similarity=0.147  Sum_probs=43.0

Q ss_pred             cceEEEEEccCCCEEEEeec------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758         119 SAVTSVDYSPTGREFVAGGY------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       119 ~~i~~~~~sp~~~~l~~~~~------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .....|.|+++|.+.+....            .+.+..++..+++....+.......++.++|+||++.|+.+
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence            34678999999997774321            22567777777877665533334679999999999987765

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=92.13  E-value=2.9  Score=31.36  Aligned_cols=28  Identities=4%  Similarity=-0.148  Sum_probs=20.8

Q ss_pred             ceeeEEeCCCCC-eEEEEecCCccEEEEec
Q psy8758          47 RSNMVSWNPMEA-FVFTAANEDFNLYSYDI   75 (198)
Q Consensus        47 ~v~~~~~~~~~~-~~~~~~~~d~~i~~~d~   75 (198)
                      ....++|.|++. .++++ ...|.|++++.
T Consensus        15 ~P~~~a~~pdG~~rl~V~-er~G~i~~~~~   43 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFIL-EKEGYVKILTP   43 (463)
T ss_dssp             SEEEEECCSSSSCCEEEE-ETTTEEEEECT
T ss_pred             CceEEEECCCCCeEEEEE-eCCceEEEEeC
Confidence            357899999996 45554 57888988864

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=90.58  E-value=1.9  Score=35.58  Aligned_cols=37  Identities=14%  Similarity=0.101  Sum_probs=32.2

Q ss_pred             ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758         120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      .+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            4677788888889999999999999999999887665

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=90.27  E-value=1.6  Score=33.79  Aligned_cols=59  Identities=8%  Similarity=0.072  Sum_probs=38.7

Q ss_pred             eEEEECCCCceEEEeeCC------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe
Q psy8758           5 THTVWSLDNKFVISASDE------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA   64 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   64 (198)
                      =.|+|+|.|++++.-..+            ..+.+.+..+++. ..+........++.++|+||++.+|+.-
T Consensus       479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvni  549 (592)
T 3zwu_A          479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGI  549 (592)
T ss_dssp             EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred             cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence            357899999966654322            2344455555554 3333334567889999999999998763

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=89.75  E-value=4.3  Score=29.16  Aligned_cols=176  Identities=9%  Similarity=0.080  Sum_probs=88.6

Q ss_pred             ceeEEEECCC----CceEEEee--CCCeEEEEEccCCc-------eeee-eeeee--ecCceeeEEeCCCCCeEEEEecC
Q psy8758           3 HVTHTVWSLD----NKFVISAS--DEMNLRVWKAHASE-------KLGP-IRKVV--MSLRSNMVSWNPMEAFVFTAANE   66 (198)
Q Consensus         3 ~v~~~~~s~~----~~~l~~~~--~d~~i~i~~~~~~~-------~~~~-~~~~~--~~~~v~~~~~~~~~~~~~~~~~~   66 (198)
                      ....++++|+    +.+.++-+  .++.|.-|.+..+.       .... +....  .......+.|.|++...++.|+.
T Consensus        81 GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~  160 (347)
T 3das_A           81 GLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES  160 (347)
T ss_dssp             SEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred             CceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence            3568999995    44333322  34556556655421       1111 11111  11234679999999877776531


Q ss_pred             ------------CccEEEEeccCCC---------Ccc-ccccCceEEEecCCCcEEEEEccCCC-ccee-----------
Q psy8758          67 ------------DFNLYSYDIRQLN---------SPL-NVHKDMTSAAANEDFNLYSYDIRQLN-SPLN-----------  112 (198)
Q Consensus        67 ------------d~~i~~~d~~~~~---------~~~-~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~-----------  112 (198)
                                  .+.|.-++.....         ..+ .++.+..-++...+|.+++-|..... ..+.           
T Consensus       161 ~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP  240 (347)
T 3das_A          161 GDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWP  240 (347)
T ss_dssp             TCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTT
T ss_pred             CCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCC
Confidence                        2445444543221         011 13344444444556777665543210 1111           


Q ss_pred             ----------------eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce---eeEEeccCcccEEEEEEcCCC
Q psy8758         113 ----------------VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS---RDIYHTKRMQHVTHTVWSLDN  173 (198)
Q Consensus       113 ----------------~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~---~~~~~~~~~~~v~~~~~s~~~  173 (198)
                                      .+..+......|+|. +|..++..-..+.|....+.....   ...+..+....+..++..|||
T Consensus       241 ~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG  319 (347)
T 3das_A          241 EAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD  319 (347)
T ss_dssp             TCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT
T ss_pred             cccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC
Confidence                            111111234556665 355555554556676666655432   122323444689999999999


Q ss_pred             CEEEEe
Q psy8758         174 KFVISA  179 (198)
Q Consensus       174 ~~l~~~  179 (198)
                      .++++-
T Consensus       320 ~lyv~t  325 (347)
T 3das_A          320 KLWLVT  325 (347)
T ss_dssp             EEEEEE
T ss_pred             cEEEEE
Confidence            866553

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=89.10  E-value=4.6  Score=28.62  Aligned_cols=50  Identities=8%  Similarity=-0.120  Sum_probs=26.5

Q ss_pred             CcEEEEEcCCCceeeEEeccCcccE-EEEEEcCCCCEEEEecC------CCeEEEEec
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHV-THTVWSLDNKFVISASD------EMNLRVWKA  190 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~------dg~v~~w~~  190 (198)
                      ..+.+||..+.+....-.......- .+++. -++++++.|+.      ...+..||+
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~  224 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF  224 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence            5789999988765544321111111 12222 25666666653      345777776

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=88.39  E-value=0.67  Score=38.12  Aligned_cols=35  Identities=11%  Similarity=0.207  Sum_probs=30.6

Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .+.+++..++..++++-+.|+++++|++.+++++.
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~  271 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE  271 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence            56777888888899999999999999999998764

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=88.04  E-value=8.6  Score=30.46  Aligned_cols=28  Identities=14%  Similarity=0.170  Sum_probs=19.5

Q ss_pred             EccCCCEEEEeec--------CCcEEEEEcCCCcee
Q psy8758         126 YSPTGREFVAGGY--------DKSLRLYLAHQGHSR  153 (198)
Q Consensus       126 ~sp~~~~l~~~~~--------d~~v~v~d~~~~~~~  153 (198)
                      ...+++.++.|+.        ...+.+||+.+.+..
T Consensus       604 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          604 YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT  639 (695)
T ss_dssp             EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred             EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence            3334777788774        346999999887654

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=86.93  E-value=5.5  Score=30.81  Aligned_cols=62  Identities=8%  Similarity=0.052  Sum_probs=39.4

Q ss_pred             ceeEEEECCCCceEEEeeC------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758           3 HVTHTVWSLDNKFVISASD------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      ....|.|.++|.+.+....            ...+..++..+++. ..+........++.++|+||++.|+++-.
T Consensus       477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~vQ  550 (592)
T 4a9v_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQ  550 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred             CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence            3467899999987763321            11455556556653 33322222356799999999999988753

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=83.64  E-value=0.66  Score=38.96  Aligned_cols=35  Identities=11%  Similarity=0.207  Sum_probs=28.8

Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      .+.+++..++..++++-+.|+++++|++.+++++.
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~  273 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE  273 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence            34455666788899999999999999999998764

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=80.60  E-value=2  Score=36.19  Aligned_cols=36  Identities=14%  Similarity=0.098  Sum_probs=30.1

Q ss_pred             eEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758         121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY  156 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~  156 (198)
                      +.+++..++..++++-+.|+++|+|++.+++++...
T Consensus       240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~  275 (1139)
T 4fhn_B          240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  275 (1139)
T ss_dssp             BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred             eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence            455666778889999999999999999999887664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	198
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-09
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-04
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	0.003
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	0.004
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	4e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.001
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.003

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 2/113 (1%)

Query: 85  HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 144
                  +   D +   +D+R+            S + ++ + P G  F  G  D + RL
Sbjct: 194 PDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252

Query: 145 YLAHQGHSRDIYHTKRMQH-VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
           +          Y    +   +T   +S   + +++  D+ N  VW A  +++ 
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.7 bits (109), Expect = 6e-07
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 114 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSL 171
           H ++   +TSV +S +GR  +AG  D +  ++ A +     +   H  R   V+    + 
Sbjct: 266 HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR---VSCLGVTD 322

Query: 172 DNKFVISASDEMNLRVW 188
           D   V + S +  L++W
Sbjct: 323 DGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.6 bits (96), Expect = 2e-05
 Identities = 18/142 (12%), Positives = 42/142 (29%), Gaps = 31/142 (21%)

Query: 4   VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTA 63
           +    +  +     + SD+   R++   A ++L       +      VS++     +   
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL--- 285

Query: 64  ANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS 123
                                       A  +DFN   +D  +      V     + V+ 
Sbjct: 286 ---------------------------LAGYDDFNCNVWDALK-ADRAGVLAGHDNRVSC 317

Query: 124 VDYSPTGREFVAGGYDKSLRLY 145
           +  +  G     G +D  L+++
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (128), Expect = 2e-09
 Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 18/190 (9%)

Query: 2   QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVF 61
           + V     + D   + S S++  +RVW     E    +R+    +     +     + + 
Sbjct: 144 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS 203

Query: 62  TAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAV 121
            A   +          L S             + D  +  +D+      L       + V
Sbjct: 204 EATGSETKKSGKPGPFLLS------------GSRDKTIKMWDVST-GMCLMTLVGHDNWV 250

Query: 122 TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISA 179
             V +   G+  ++   DK+LR++             H      VT   +     +V++ 
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF---VTSLDFHKTAPYVVTG 307

Query: 180 SDEMNLRVWK 189
           S +  ++VW+
Sbjct: 308 SVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (87), Expect = 4e-04
 Identities = 24/221 (10%), Positives = 64/221 (28%), Gaps = 28/221 (12%)

Query: 4   VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR---KVVMSLRSNMVSWNPMEAFV 60
           VT  ++      ++SAS++  ++VW     +    ++     V  +  +           
Sbjct: 20  VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 79

Query: 61  FTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM--- 117
                         IR ++   +    ++     +     S D       +     +   
Sbjct: 80  DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139

Query: 118 ---TSAVTSVDYSPTGREFVAGGYDKSLRLYLAH--------QGHSRDIYHTKRMQHVTH 166
                 V  V  +  G    +   D+++R+++          + H   +         ++
Sbjct: 140 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSY 199

Query: 167 TVWSL-----------DNKFVISASDEMNLRVWKAHASEKL 196
           +  S               F++S S +  +++W       L
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 240

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (80), Expect = 0.003
 Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 16/197 (8%)

Query: 1   MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFV 60
             +V+      +   ++SAS +  +++W+      +             MV  N     +
Sbjct: 101 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG--HREWVRMVRPNQDGTLI 158

Query: 61  FTAANE-DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS 119
            + +N+    ++    ++  + L  H+ +    +    + YS                 +
Sbjct: 159 ASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA------------T 206

Query: 120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA 179
              +      G   ++G  DK+++++    G             V   ++    KF++S 
Sbjct: 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSC 265

Query: 180 SDEMNLRVWKAHASEKL 196
           +D+  LRVW       +
Sbjct: 266 ADDKTLRVWDYKNKRCM 282

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.1 bits (110), Expect = 4e-07
 Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 27/222 (12%)

Query: 2   QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFV- 60
            ++    +S D KF+ + +++  +R+W     + +  ++     + S     +  +    
Sbjct: 122 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG 181

Query: 61  ---------FTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIR------ 105
                         +     S +       ++       AA + D  +  +D        
Sbjct: 182 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 241

Query: 106 QLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM---- 161
           +L+S          +V SV ++  G+  V+G  D+S++L+     +++    T       
Sbjct: 242 RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCE 301

Query: 162 -------QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196
                    V     + ++++++S S +  +  W   +   L
Sbjct: 302 VTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 343

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.0 bits (102), Expect = 4e-06
 Identities = 25/202 (12%), Positives = 60/202 (29%), Gaps = 35/202 (17%)

Query: 1   MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRS-----NMVSWNP 55
               T  V   D K++ + S +  +RVW +     +  +     S          V +  
Sbjct: 205 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 264

Query: 56  MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK 115
               V + +  D ++  ++++  N+  +     +                   +    + 
Sbjct: 265 DGQSVVSGS-LDRSVKLWNLQNANNKSDSKTPNS------------------GTCEVTYI 305

Query: 116 DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH--------QGHSRDIYHTKRMQHVTHT 167
                V SV  +      ++G  D+ +  +           QGH   +     +     +
Sbjct: 306 GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS---VAVANGS 362

Query: 168 VWSLDNKFVISASDEMNLRVWK 189
               +     + S +   R+WK
Sbjct: 363 SLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.2 bits (79), Expect = 0.004
 Identities = 12/82 (14%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 1   MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR---KVVMSLR-SNMVSWNPM 56
              V     + ++++++S S +  +  W   +   L  ++     V+S+  +N  S  P 
Sbjct: 308 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 367

Query: 57  EAFVFTAANEDFNLYSYDIRQL 78
                T +  D     +  +++
Sbjct: 368 YNVFATGS-GDCKARIWKYKKI 388

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (109), Expect = 5e-07
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 123 SVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE 182
           S+ ++  G+ FV+ G D  L  +    G S  I+ +K    V     S+D+K++++ S +
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGAS--IFQSKESSSVLSCDISVDDKYIVTGSGD 327

Query: 183 MNLRVWK 189
               V++
Sbjct: 328 KKATVYE 334

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.2 bits (105), Expect = 2e-06
 Identities = 10/83 (12%), Positives = 28/83 (33%), Gaps = 7/83 (8%)

Query: 113 VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY----HTKRMQHVTHTV 168
            H  +   ++   ++    +      +  + +Y         ++    H  +   VT   
Sbjct: 2   YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ---VTGVD 58

Query: 169 WSLDNKFVISASDEMNLRVWKAH 191
           W+ D+  +++   + N  VW   
Sbjct: 59  WAPDSNRIVTCGTDRNAYVWTLK 81

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 21/188 (11%), Positives = 55/188 (29%), Gaps = 6/188 (3%)

Query: 9   WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF 68
            + +   V + S   +L  ++    ++   +    + L  + +  +   A  + A+N+  
Sbjct: 75  DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL 134

Query: 69  NLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP 128
             +      +     + K    A  +    L      +L   +      +   TSVD S 
Sbjct: 135 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE 194

Query: 129 TGREFVAGGYDKSLRLYLAHQGHSRDIYH-----TKRMQHVTHTVWSLDNKFVISASDEM 183
            G     G  + ++++           +            +    +S     +  A D  
Sbjct: 195 RGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN 253

Query: 184 NLRVWKAH 191
           +      +
Sbjct: 254 SFGCITLY 261

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 41.0 bits (94), Expect = 4e-05
 Identities = 18/190 (9%), Positives = 43/190 (22%), Gaps = 24/190 (12%)

Query: 1   MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFV 60
             H     +  D+K +   S                  +      +     S NP +   
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK--- 234

Query: 61  FTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA 120
                              +      DM   ++  + +   Y +          +     
Sbjct: 235 ----------LVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMII------PLESSILI 278

Query: 121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS 180
            +   +      +        L  Y        ++ +     ++T    S D K V+   
Sbjct: 279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN-----NLTDLRLSADRKTVMVRK 333

Query: 181 DEMNLRVWKA 190
           D+  +  +  
Sbjct: 334 DDGKIYTFPL 343

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (85), Expect = 5e-04
 Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 6/188 (3%)

Query: 7   TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR---KVVMSLRSNMVSWNPMEAFVFTA 63
           T        ++S SD+  L+VW A   + L  +      V S +                
Sbjct: 21  TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLK 80

Query: 64  ANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS 123
                          ++       +            +  +  + +   +H  M      
Sbjct: 81  VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 140

Query: 124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM 183
                 GR  V+G YD  +++       +    HT +           D   V+S S + 
Sbjct: 141 RCVQYDGRRVVSGAYDFMVKV---WDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 197

Query: 184 NLRVWKAH 191
           ++RVW   
Sbjct: 198 SIRVWDVE 205

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (82), Expect = 0.001
 Identities = 12/85 (14%), Positives = 27/85 (31%), Gaps = 5/85 (5%)

Query: 111 LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY-LAHQGHSRDIYHTKRMQH-VTHTV 168
               KD    ++ +   P+    +   +D SL +Y    Q  + D+  + R +H +    
Sbjct: 7   EQAPKD---YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 169 WSLDNKFVISASDEMNLRVWKAHAS 193
           +  +    I         +      
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIG 88

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.9 bits (78), Expect = 0.003
 Identities = 10/97 (10%), Positives = 33/97 (34%), Gaps = 1/97 (1%)

Query: 49  NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLN 108
             +    ++   +       N  S+   +  +     ++   A  + D N++ Y +++  
Sbjct: 189 YDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM 248

Query: 109 SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145
             +         V ++ +       V+ G D  ++ +
Sbjct: 249 KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRW 284

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	198
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.98
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.97
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.97
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.96
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.95
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.94
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.94
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.93
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.93
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.92
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.92
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.92
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.91
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.91
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.9
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.89
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.85
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.81
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.81
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.79
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.79
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.78
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.76
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.74
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.69
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.61
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.6
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.52
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.51
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.46
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.45
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.44
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.34
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.3
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.25
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.24
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.17
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.17
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.16
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.14
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.13
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.08
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.07
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.04
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.03
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.98
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.95
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.87
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.78
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.66
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.46
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.38
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.3
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	98.02
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.95
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.92
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.63
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.6
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.55
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.42
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.24
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.24
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.21
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.21
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.13
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.05
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.97
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.94
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.89
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.84
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.28
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	96.21
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.03
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	95.79
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	95.54
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.26
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.95
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	92.88
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	92.79
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	92.04
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	89.78
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	89.49
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	87.56

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.8e-37  Score=217.36  Aligned_cols=194  Identities=17%  Similarity=0.233  Sum_probs=162.5

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec-CCccEEEEeccCCC-
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN-EDFNLYSYDIRQLN-   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~d~~i~~~d~~~~~-   79 (198)
                      +.|++++|+|+|++|++|+.||.|++||+.+++.........|..+|.+++|+|+++.+++++. .+..+++|+.++.. 
T Consensus        59 ~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~  138 (311)
T d1nr0a1          59 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS  138 (311)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred             CCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccccccc
Confidence            5799999999999999999999999999988765433333346788999999999999888753 35668888876543 


Q ss_pred             -Ccccccc------------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758          80 -SPLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL  146 (198)
Q Consensus        80 -~~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d  146 (198)
                       ..+..|.            +..+++++.|+.|++||+++ .+....+..|..+|+++.|+|+++++++++.|+.+++||
T Consensus       139 ~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~-~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d  217 (311)
T d1nr0a1         139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN  217 (311)
T ss_dssp             CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cccccccccccccccccccceeeecccccccccccccccc-cccccccccccccccccccCccccccccccccccccccc
Confidence             2223322            23588899999999999998 678888889999999999999999999999999999999


Q ss_pred             cCCCceeeEEe------ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         147 AHQGHSRDIYH------TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       147 ~~~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +.++.....+.      .+|...|.+++|+|++++|++++.||.|++||+++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~  273 (311)
T d1nr0a1         218 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE  273 (311)
T ss_dssp             TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             cccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            99887765542      357889999999999999999999999999999998875

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.2e-35  Score=206.80  Aligned_cols=191  Identities=19%  Similarity=0.337  Sum_probs=163.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++|+|++++|++|+.||.|++||+.+++....+..  |...|.+++|+|++.+++++ +.|+.+.+|+.......
T Consensus        56 ~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~--~~~~v~~v~~~~~~~~l~~~-~~d~~i~~~~~~~~~~~  132 (340)
T d1tbga_          56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGNYVACG-GLDNICSIYNLKTREGN  132 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEEC--SCSCEEEEEECTTSSEEEEE-ETTCCEEEEESSSSCSC
T ss_pred             CCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEec--ccccEEeeEeeccceeeeee-cccceeecccccccccc
Confidence            5799999999999999999999999999998887666654  57789999999999988774 68999999997543211


Q ss_pred             ------cccc----------------------------------------------------cCceEEEecCCCcEEEEE
Q psy8758          82 ------LNVH----------------------------------------------------KDMTSAAANEDFNLYSYD  103 (198)
Q Consensus        82 ------~~~~----------------------------------------------------~~~~~~~~~~~~~i~~~d  103 (198)
                            +..|                                                    ....++++..|+.+++||
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d  212 (340)
T d1tbga_         133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD  212 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             cccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEEE
Confidence                  0111                                                    112478899999999999


Q ss_pred             ccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecCC
Q psy8758         104 IRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       104 ~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                      +++ .+++..+..|...|++++|+|++++|++++.|+.|++||++.......+ ...+...+.+++|+|++++|++++.|
T Consensus       213 ~~~-~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d  291 (340)
T d1tbga_         213 VRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD  291 (340)
T ss_dssp             TTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETT
T ss_pred             CCC-CcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECC
Confidence            998 7888899999999999999999999999999999999999998877665 34556789999999999999999999


Q ss_pred             CeEEEEecCCCccc
Q psy8758         183 MNLRVWKAHASEKL  196 (198)
Q Consensus       183 g~v~~w~~~~~~~~  196 (198)
                      |.|++||+.+++++
T Consensus       292 g~i~iwd~~~~~~~  305 (340)
T d1tbga_         292 FNCNVWDALKADRA  305 (340)
T ss_dssp             SCEEEEETTTCCEE
T ss_pred             CEEEEEECCCCcEE
Confidence            99999999998865

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.3e-34  Score=206.04  Aligned_cols=195  Identities=14%  Similarity=0.164  Sum_probs=154.4

Q ss_pred             CcceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           1 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         1 ~~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      .++|+|++|+|+|++||+++.|+.|++||+.+++......-..|..+|.+++|+|++++++++ +.|+.|++||+.....
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~-s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC-GTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEE-ETTSCEEEEEEETTEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEE-ECCCeEEEEeeccccc
Confidence            368999999999999999999999999999876532222222368899999999999988764 6899999999875321


Q ss_pred             ----ccccc-----------cCceEEEecCCCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758          81 ----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL  142 (198)
Q Consensus        81 ----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v  142 (198)
                          .+..|           .+..+++++.|+.+++|++......   ......|...|.+++|+|++++|++++.|+.+
T Consensus        86 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v  165 (371)
T d1k8kc_          86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKC  165 (371)
T ss_dssp             EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEE
Confidence                11112           3356899999999999998763321   23345688899999999999999999999999


Q ss_pred             EEEEcCCCce-----------------eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         143 RLYLAHQGHS-----------------RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       143 ~v~d~~~~~~-----------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++||......                 .......|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus       166 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~  236 (371)
T d1k8kc_         166 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV  236 (371)
T ss_dssp             EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred             EEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccce
Confidence            9999865321                 11122567788999999999999999999999999999887764

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.8e-33  Score=196.82  Aligned_cols=190  Identities=18%  Similarity=0.147  Sum_probs=152.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++|+|++++|++|+.||.|++||+++++....+.. .|...|.+++|+|++..+ ++ +.|+.+++|+.......
T Consensus        13 ~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~h~~~v~~v~~~~~g~~~-~~-~~d~~v~~~~~~~~~~~   89 (299)
T d1nr0a2          13 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD-VHATMITGIKTTSKGDLF-TV-SWDDHLKVVPAGGSGVD   89 (299)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSC-SCSSCEEEEEECTTSCEE-EE-ETTTEEEEECSSSSSSC
T ss_pred             CCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCCcEEEEEeeccceee-cc-cceeeEEEeccCCcccc
Confidence            5799999999999999999999999999998876655543 367789999999998754 43 47899999997532110


Q ss_pred             -----ccc------------------------------------------------ccCceEEEecCCCcEEEEEccCCC
Q psy8758          82 -----LNV------------------------------------------------HKDMTSAAANEDFNLYSYDIRQLN  108 (198)
Q Consensus        82 -----~~~------------------------------------------------~~~~~~~~~~~~~~i~~~d~~~~~  108 (198)
                           ...                                                ..+..+++++.|+.+++||+++ .
T Consensus        90 ~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~-~  168 (299)
T d1nr0a2          90 SSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG-A  168 (299)
T ss_dssp             TTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEET-T
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence                 000                                                0113578999999999999987 3


Q ss_pred             cce-eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE--eccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758         109 SPL-NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNL  185 (198)
Q Consensus       109 ~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v  185 (198)
                      ... .....|...|++++|+|++++|++++.|+.|++||+.++......  ..+|...|.+++|+|++++|++++.||.|
T Consensus       169 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i  248 (299)
T d1nr0a2         169 SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV  248 (299)
T ss_dssp             EEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEE
Confidence            332 234568899999999999999999999999999999887654432  35688899999999999999999999999


Q ss_pred             EEEecCCCcc
Q psy8758         186 RVWKAHASEK  195 (198)
Q Consensus       186 ~~w~~~~~~~  195 (198)
                      ++||+++++.
T Consensus       249 ~iwd~~~~~~  258 (299)
T d1nr0a2         249 IVWNMNKPSD  258 (299)
T ss_dssp             EEEETTCTTS
T ss_pred             EEEECCCCCc
Confidence            9999987653

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-33  Score=198.13  Aligned_cols=190  Identities=14%  Similarity=0.207  Sum_probs=159.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee---eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR---KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      ..|.+++|+|+|++|++|+ ||.|+|||+.++.....+.   ...|...|.+++|+|+++.+++ ++.|+.|++||+...
T Consensus        52 ~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s-~~~dg~i~iwd~~~~  129 (337)
T d1gxra_          52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIV-GGEASTLSIWDLAAP  129 (337)
T ss_dssp             SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEE-EESSSEEEEEECCCC
T ss_pred             CcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEE-eeccccccccccccc
Confidence            5799999999999999987 7899999998765433332   2336778999999999999876 468999999998754


Q ss_pred             CCc----cccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          79 NSP----LNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        79 ~~~----~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      ...    +..|           ....+++++.++.+++|++++ .++......|...+.+++|+|+++.+++++.|+.++
T Consensus       130 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~-~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~  208 (337)
T d1gxra_         130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR  208 (337)
T ss_dssp             --EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence            321    1112           235688999999999999998 677788888999999999999999999999999999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +||+++++.+...  .|...|.+++|+|++++|++++.|+.+++||+++++..
T Consensus       209 i~d~~~~~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  259 (337)
T d1gxra_         209 SWDLREGRQLQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY  259 (337)
T ss_dssp             EEETTTTEEEEEE--ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred             ccccccceeeccc--ccccceEEEEEcccccccceeccccccccccccccccc
Confidence            9999999887765  56789999999999999999999999999999987653

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.8e-33  Score=200.81  Aligned_cols=192  Identities=17%  Similarity=0.262  Sum_probs=149.0

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee----------------eecCceeeEEeCCCCCeEEEEec
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV----------------VMSLRSNMVSWNPMEAFVFTAAN   65 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~~~~~~~   65 (198)
                      +.|++++|+|+|++|++|+ |+.|+|||+.+++....+...                .+...|.+++|+|+++++++ |+
T Consensus        63 ~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s-~~  140 (388)
T d1erja_          63 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT-GA  140 (388)
T ss_dssp             SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE-EE
T ss_pred             CcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCccee-cc
Confidence            5799999999999999986 889999999888765554321                24556899999999998876 56


Q ss_pred             CCccEEEEeccCCCCc--ccc-----------------------------------------------------ccCceE
Q psy8758          66 EDFNLYSYDIRQLNSP--LNV-----------------------------------------------------HKDMTS   90 (198)
Q Consensus        66 ~d~~i~~~d~~~~~~~--~~~-----------------------------------------------------~~~~~~   90 (198)
                      .|+.|++||.......  ...                                                     ..+..+
T Consensus       141 ~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  220 (388)
T d1erja_         141 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI  220 (388)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCCCCeE
Confidence            9999999998643211  000                                                     011358


Q ss_pred             EEecCCCcEEEEEccCCCcceeee-------cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee---------
Q psy8758          91 AAANEDFNLYSYDIRQLNSPLNVH-------KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD---------  154 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~---------  154 (198)
                      ++++.|+.|++||+++ ......+       ..|...|.+++|+|++++|++++.|+.|++||++.+....         
T Consensus       221 ~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~  299 (388)
T d1erja_         221 AAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT  299 (388)
T ss_dssp             EEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred             EEEcCCCeEEEeeccc-CccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccc
Confidence            8889999999999987 3443332       4578899999999999999999999999999998654321         


Q ss_pred             --EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         155 --IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       155 --~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                        .....|...|.+++|+|++++|++++.||.|++||+++++++
T Consensus       300 ~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~  343 (388)
T d1erja_         300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL  343 (388)
T ss_dssp             EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred             eeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence              123467789999999999999999999999999999998875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-32  Score=191.14  Aligned_cols=183  Identities=15%  Similarity=0.220  Sum_probs=158.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..+.++.|+|+++.+++++.|+.+++||+.+++....+..  +...+.+++|+|++..+++ ++.|+.+++|+.......
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~-~~~d~~v~~~~~~~~~~~  178 (317)
T d1vyhc1         102 HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG--HREWVRMVRPNQDGTLIAS-CSNDQTVRVWVVATKECK  178 (317)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTCCEE
T ss_pred             ccceeeeccCCCceEEeeccCcceeEeecccceeeeEEcc--CCCcceeeecccCCCEEEE-EeCCCeEEEEeeccceee
Confidence            3578899999999999999999999999998876666654  4677899999999998876 569999999998754321


Q ss_pred             --cccc-------------------------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc
Q psy8758          82 --LNVH-------------------------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP  128 (198)
Q Consensus        82 --~~~~-------------------------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp  128 (198)
                        +..+                               ....+++++.|+.+++||+++ ++++..+.+|...+.+++|+|
T Consensus       179 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~  257 (317)
T d1vyhc1         179 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHS  257 (317)
T ss_dssp             EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECS
T ss_pred             EEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCC-CcEEEEEeCCCCCEEEEEECC
Confidence              1111                               123588999999999999998 788899999999999999999


Q ss_pred             CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         129 TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       129 ~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      ++++|++++.||.|++||+++++++..+ .+|...|++++|+|++++|++++.||+|++||
T Consensus       258 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         258 GGKFILSCADDKTLRVWDYKNKRCMKTL-NAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SSSCEEEEETTTEEEEECCTTSCCCEEE-ECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCCEEEEEECCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            9999999999999999999999988877 68889999999999999999999999999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-32  Score=192.11  Aligned_cols=190  Identities=16%  Similarity=0.234  Sum_probs=156.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      +.|.+++|+|++++|++++.||.|++||+.............+...+..+.|+|++..++++ +.++.+++|++++....
T Consensus        98 ~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~~~~~~~~~  176 (337)
T d1gxra_          98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLV  176 (337)
T ss_dssp             SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEE
T ss_pred             CcEEEEEEcCCCCEEEEeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            46999999999999999999999999998755432222223356788999999999888764 68999999998764321


Q ss_pred             --ccc-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758          82 --LNV-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH  148 (198)
Q Consensus        82 --~~~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~  148 (198)
                        ...           ..+..+++++.|+.+++||+++ .+.+..+ .+...|.+++|+|++++|++++.|+.+++||++
T Consensus       177 ~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~-~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~  254 (337)
T d1gxra_         177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE-GRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN  254 (337)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccc-ceeeccc-ccccceEEEEEcccccccceecccccccccccc
Confidence              111           2335688899999999999998 5666555 478899999999999999999999999999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++....  ..|...|.+++|+|++++|++++.||.|++||+.+++++
T Consensus       255 ~~~~~~~--~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~  300 (337)
T d1gxra_         255 KPDKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI  300 (337)
T ss_dssp             SSCEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred             ccccccc--cccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEE
Confidence            9887544  578899999999999999999999999999999998865

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.1e-32  Score=190.51  Aligned_cols=185  Identities=14%  Similarity=0.215  Sum_probs=147.7

Q ss_pred             cceeEEEECCCCceEEEeeC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|.+++|+|+++++++++.  +..+++|++++++....+..  |...|.+++|+|++++++++|+.|+.|++||+++..
T Consensus       103 ~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~--h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~  180 (311)
T d1nr0a1         103 GPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG--QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK  180 (311)
T ss_dssp             SCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCC--CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred             Cccccccccccccccccccccccccccccccccccccccccc--cccccccccccccceeeecccccccccccccccccc
Confidence            57999999999999998875  45699999998876666544  567899999999999877778899999999998644


Q ss_pred             Cc--cccc-----------cCceEEEecCCCcEEEEEccCCCcceeee-------cCCCcceEEEEEccCCCEEEEeecC
Q psy8758          80 SP--LNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVH-------KDMTSAVTSVDYSPTGREFVAGGYD  139 (198)
Q Consensus        80 ~~--~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~d  139 (198)
                      ..  ...|           .+..+++++.|+.+++||+++ ......+       .+|...|++++|+|++++|++++.|
T Consensus       181 ~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~D  259 (311)
T d1nr0a1         181 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD  259 (311)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccCcccccccccccccccccccccc-ccccccccccccccccccccccccccCCCCCEEEEEeCC
Confidence            21  1111           345788999999999999987 4444433       3578899999999999999999999


Q ss_pred             CcEEEEEcCCCceeeEEeccCc--ccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRM--QHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      +.|++||+++++++..+...+.  ..+.++.|  +++.|++++.||.|++||++
T Consensus       260 g~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         260 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             SEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred             CeEEEEECCCCcEEEEEECCCCccceEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence            9999999999998887743332  33444544  56678999999999999974

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-31  Score=186.33  Aligned_cols=190  Identities=16%  Similarity=0.286  Sum_probs=153.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCcee--------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSN--------------------------------   49 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~--------------------------------   49 (198)
                      ++|++++|+|++++|++|+.||.|+|||+.+++....+..  |...|.                                
T Consensus        18 ~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (317)
T d1vyhc1          18 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR   95 (317)
T ss_dssp             SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC--CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeC--CCCcEEEEeeeccccccccccccccccccccccccccc
Confidence            5799999999999999999999999999988776555432  233344                                


Q ss_pred             ----------eEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc-----------cCceEEEecCCCcEEEEEccC
Q psy8758          50 ----------MVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH-----------KDMTSAAANEDFNLYSYDIRQ  106 (198)
Q Consensus        50 ----------~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~-----------~~~~~~~~~~~~~i~~~d~~~  106 (198)
                                ++.|+|+++.+++ ++.|+.+++||+++....  +..|           .+..+++++.|+.+++|++.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~  174 (317)
T d1vyhc1          96 TMHGHDHNVSSVSIMPNGDHIVS-ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT  174 (317)
T ss_dssp             CCCCCSSCEEEEEECSSSSEEEE-EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             ccccccccceeeeccCCCceEEe-eccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeecc
Confidence                      4555555555554 357788888887654321  1112           235688999999999999998


Q ss_pred             CCcceeeecCCCcceEEEEEccCC--------------------CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEE
Q psy8758         107 LNSPLNVHKDMTSAVTSVDYSPTG--------------------REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH  166 (198)
Q Consensus       107 ~~~~~~~~~~~~~~i~~~~~sp~~--------------------~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~  166 (198)
                       ......+..|...+.+++|+|++                    .++++++.|+.|++||+++++++..+ .+|...|.+
T Consensus       175 -~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~  252 (317)
T d1vyhc1         175 -KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL-VGHDNWVRG  252 (317)
T ss_dssp             -CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEE
T ss_pred             -ceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEE-eCCCCCEEE
Confidence             67788888899999999998864                    46889999999999999999988877 578899999


Q ss_pred             EEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         167 TVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       167 ~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++|+|++++|++++.||.|++||+++++++
T Consensus       253 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  282 (317)
T d1vyhc1         253 VLFHSGGKFILSCADDKTLRVWDYKNKRCM  282 (317)
T ss_dssp             EEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             EEECCCCCEEEEEECCCeEEEEECCCCcEE
Confidence            999999999999999999999999998875

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.9e-31  Score=191.11  Aligned_cols=188  Identities=14%  Similarity=0.146  Sum_probs=151.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++|+|++++|++++.|+.|++||+.++.....+....+...+.+++|+|+++.+++ ++.|+.+++|+.......
T Consensus        52 ~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~-~s~d~~i~i~~~~~~~~~  130 (371)
T d1k8kc_          52 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAV-GSGSRVISICYFEQENDW  130 (371)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEE-EETTSSEEEEEEETTTTE
T ss_pred             CCEEEEEECCCCCEEEEEECCCeEEEEeeccccccccccccccccccccccccccccccee-ecccCcceeeeeeccccc
Confidence            5799999999999999999999999999987765444444446778999999999998876 468999999987643321


Q ss_pred             ----------------cccc-cCceEEEecCCCcEEEEEccCC-----------------CcceeeecCCCcceEEEEEc
Q psy8758          82 ----------------LNVH-KDMTSAAANEDFNLYSYDIRQL-----------------NSPLNVHKDMTSAVTSVDYS  127 (198)
Q Consensus        82 ----------------~~~~-~~~~~~~~~~~~~i~~~d~~~~-----------------~~~~~~~~~~~~~i~~~~~s  127 (198)
                                      +..+ .+..+++++.|+.+++|++...                 ...+.....|...+.+++|+
T Consensus       131 ~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  210 (371)
T d1k8kc_         131 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS  210 (371)
T ss_dssp             EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred             ccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEee
Confidence                            1112 2457899999999999997642                 12344556788899999999


Q ss_pred             cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      |++++|++++.|+.|++||+.+++.+..+ ..|..+|.+++|+|++++|++|. |+.+++|..+.
T Consensus       211 ~~g~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~  273 (371)
T d1k8kc_         211 ANGSRVAWVSHDSTVCLADADKKMAVATL-ASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDS  273 (371)
T ss_dssp             SSSSEEEEEETTTEEEEEEGGGTTEEEEE-ECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEET
T ss_pred             cccccccccccCCcceEEeeecccceeee-ecccccceeeeecCCCCEEEEEc-CCceEEEEeeC
Confidence            99999999999999999999999888877 57888999999999999888765 67666665543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8e-31  Score=185.78  Aligned_cols=193  Identities=17%  Similarity=0.234  Sum_probs=148.7

Q ss_pred             cceeEEEECC--CCceEEEeeCCCeEEEEEccCCceeeeeee------eeecCceeeEEeCCCCCeEEEEec-CCccEEE
Q psy8758           2 QHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKLGPIRK------VVMSLRSNMVSWNPMEAFVFTAAN-EDFNLYS   72 (198)
Q Consensus         2 ~~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~-~d~~i~~   72 (198)
                      ..|++++|+|  ++++|++|+.||+|++||+..++....+..      ..+..+|.+++|+|+++.+++++. .++.+.+
T Consensus        64 ~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~  143 (325)
T d1pgua1          64 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF  143 (325)
T ss_dssp             SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred             CCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEE
Confidence            3699999998  568999999999999999976543333221      125678999999999999887653 4667888


Q ss_pred             EeccCCC--Cccccc------------cCceEEEecCCCcEEEEEccCCCcceee---ecCCCcceEEEEEccC-CCEEE
Q psy8758          73 YDIRQLN--SPLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNV---HKDMTSAVTSVDYSPT-GREFV  134 (198)
Q Consensus        73 ~d~~~~~--~~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~i~~~~~sp~-~~~l~  134 (198)
                      |+..+..  ..+..|            .+..+++++.|+.+++||++. .+....   ...|...|.+++|+|+ +++++
T Consensus       144 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~  222 (325)
T d1pgua1         144 ISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGEFVI  222 (325)
T ss_dssp             EETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCCEEE
T ss_pred             EeecccccceeeeecccccccccccccccceEEEeecccccccccccc-cccceecccccCCCCccEEeeeccccceecc
Confidence            8876433  122222            223578899999999999876 333333   3456778999999997 67899


Q ss_pred             EeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEc---CCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         135 AGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS---LDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       135 ~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +++.|+.|++||+++++.+..+ .+|...+..+.|+   |+|++|++++.|+.|++||+++++++
T Consensus       223 s~~~d~~i~iwd~~~~~~~~~l-~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~  286 (325)
T d1pgua1         223 TVGSDRKISCFDGKSGEFLKYI-EDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCV  286 (325)
T ss_dssp             EEETTCCEEEEETTTCCEEEEC-CBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             ccccccceeeeeeccccccccc-cccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEE
Confidence            9999999999999999988776 4666666555555   68999999999999999999998875

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=1.8e-30  Score=187.20  Aligned_cols=186  Identities=13%  Similarity=0.179  Sum_probs=137.9

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEE--------------------
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFT--------------------   62 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--------------------   62 (198)
                      .|++++|+|++++|++|+.||.|++|+...++.......  |...|.++.|++++..++.                    
T Consensus       123 ~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~  200 (388)
T d1erja_         123 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG--HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT  200 (388)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             CEEEEEECCCCCcceeccccccccccccccccccccccc--ccccccccccccccccccccccceeeeeeeccccccccc
Confidence            589999999999999999999999999987765444432  3445555555555544433                    


Q ss_pred             ---------------------EecCCccEEEEeccCCCCc---------cccc-----------cCceEEEecCCCcEEE
Q psy8758          63 ---------------------AANEDFNLYSYDIRQLNSP---------LNVH-----------KDMTSAAANEDFNLYS  101 (198)
Q Consensus        63 ---------------------~~~~d~~i~~~d~~~~~~~---------~~~~-----------~~~~~~~~~~~~~i~~  101 (198)
                                           +++.|+.|++||.++....         ...|           .+..+++++.|+.+++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~i  280 (388)
T d1erja_         201 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL  280 (388)
T ss_dssp             EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             cccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEE
Confidence                                 2334444444444322110         0111           2346899999999999


Q ss_pred             EEccCCC-----------cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEE-
Q psy8758         102 YDIRQLN-----------SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW-  169 (198)
Q Consensus       102 ~d~~~~~-----------~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~-  169 (198)
                      ||+++..           ........|...+.+++|+|++++|++++.||.|++||+++++++..+ .+|.+.|.++++ 
T Consensus       281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l-~~H~~~V~~~~~~  359 (388)
T d1erja_         281 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNSVISVAVA  359 (388)
T ss_dssp             EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEEC
T ss_pred             EeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE-eCCCCCEEEEEEe
Confidence            9987522           223344568889999999999999999999999999999999998877 689999999875 


Q ss_pred             -----cCCCCEEEEecCCCeEEEEecC
Q psy8758         170 -----SLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       170 -----s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                           +|++++|++++.||+|++|+++
T Consensus       360 ~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         360 NGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             SSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             cCcccCCCCCEEEEEeCCCEEEEEeee
Confidence                 6789999999999999999985

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.2e-30  Score=182.60  Aligned_cols=195  Identities=11%  Similarity=0.054  Sum_probs=143.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ..|++++|+|++++|++++.||+|+|||++.+.....+ ....|..+|.+++|+|++..++++|+.|+.+++|+......
T Consensus        12 d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~   91 (342)
T d1yfqa_          12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS   91 (342)
T ss_dssp             SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred             CCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccc
Confidence            46999999999999999999999999999876544333 33357889999999998877777788999999999875543


Q ss_pred             cc--------------ccccCceEEEecCCCcEEEEEccCCCccee---eecC--CCcceEEEEEccCCCEEEEeecCCc
Q psy8758          81 PL--------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLN---VHKD--MTSAVTSVDYSPTGREFVAGGYDKS  141 (198)
Q Consensus        81 ~~--------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~~~--~~~~i~~~~~sp~~~~l~~~~~d~~  141 (198)
                      ..              .......+++++.++.+++||++.......   ....  .......+.+.+++..+++++.|+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  171 (342)
T d1yfqa_          92 FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQ  171 (342)
T ss_dssp             EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTE
T ss_pred             cccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCc
Confidence            21              122345788999999999999875222111   1111  1223445667777788888888888


Q ss_pred             EEEEEcCCCceeeEE------------------------------------------------------------eccCc
Q psy8758         142 LRLYLAHQGHSRDIY------------------------------------------------------------HTKRM  161 (198)
Q Consensus       142 v~v~d~~~~~~~~~~------------------------------------------------------------~~~~~  161 (198)
                      |++||++........                                                            ...|.
T Consensus       172 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (342)
T d1yfqa_         172 VQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLA  251 (342)
T ss_dssp             EEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSC
T ss_pred             EEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCccc
Confidence            888887643211000                                                            01234


Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ..+++++|+|++++|++|+.||.|++||+++++++
T Consensus       252 ~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l  286 (342)
T d1yfqa_         252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI  286 (342)
T ss_dssp             CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred             ccceeEEecCCccEEEEECCCCEEEEEECCCCcEE
Confidence            46889999999999999999999999999998875

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=6.4e-30  Score=185.37  Aligned_cols=135  Identities=16%  Similarity=0.232  Sum_probs=108.6

Q ss_pred             EEEecCCccEEEEeccCCCC------------------------------ccccccCceEEEecCCCcEEEEEccCCCcc
Q psy8758          61 FTAANEDFNLYSYDIRQLNS------------------------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSP  110 (198)
Q Consensus        61 ~~~~~~d~~i~~~d~~~~~~------------------------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~  110 (198)
                      +.+++.|+.+.+|++.....                              .+...++.++++|+.|++|++||+++ .++
T Consensus       139 ~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~-~~~  217 (393)
T d1sq9a_         139 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELST-LRP  217 (393)
T ss_dssp             EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTT-TEE
T ss_pred             EEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecc-ccc
Confidence            34456899999999753211                              01122334789999999999999987 455


Q ss_pred             eee------ecCCCcceEEEEEccCCCEEEEeecCCc---EEEEEcCCCceeeEEe------------ccCcccEEEEEE
Q psy8758         111 LNV------HKDMTSAVTSVDYSPTGREFVAGGYDKS---LRLYLAHQGHSRDIYH------------TKRMQHVTHTVW  169 (198)
Q Consensus       111 ~~~------~~~~~~~i~~~~~sp~~~~l~~~~~d~~---v~v~d~~~~~~~~~~~------------~~~~~~v~~~~~  169 (198)
                      +..      +.+|..+|++++|+|+|++|++++.|++   |++||+.+++.+..+.            .+|...|++++|
T Consensus       218 ~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~f  297 (393)
T d1sq9a_         218 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF  297 (393)
T ss_dssp             EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred             ccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeecc
Confidence            443      3568899999999999999999999874   9999999988776652            378899999999


Q ss_pred             cCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         170 SLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       170 s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +|++++|++++.|++|++||+++|+++
T Consensus       298 spd~~~l~S~s~D~~v~vWd~~~g~~~  324 (393)
T d1sq9a_         298 NDSGETLCSAGWDGKLRFWDVKTKERI  324 (393)
T ss_dssp             CSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             CCCCCeeEEECCCCEEEEEECCCCCEE
Confidence            999999999999999999999999875

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=1.1e-28  Score=174.30  Aligned_cols=185  Identities=16%  Similarity=0.197  Sum_probs=146.7

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee----eee--------------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL----GPI--------------------------------------   39 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~----~~~--------------------------------------   39 (198)
                      .+|.+++|+|+++++++++.|+.+++|+.......    ..+                                      
T Consensus        98 ~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (340)
T d1tbga_          98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT  177 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEE
T ss_pred             ccEEeeEeeccceeeeeecccceeecccccccccccccceeccccccccccccccccccccccccccccccccccccccc
Confidence            46999999999999999999999999997543210    000                                      


Q ss_pred             -eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--ccccc-----------cCceEEEecCCCcEEEEEcc
Q psy8758          40 -RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--PLNVH-----------KDMTSAAANEDFNLYSYDIR  105 (198)
Q Consensus        40 -~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~  105 (198)
                       ........+....+.+....+++ +..|+.+++||+++...  .+..|           .+..+++++.|+.+++||++
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~  256 (340)
T d1tbga_         178 TTFTGHTGDVMSLSLAPDTRLFVS-GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR  256 (340)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEE-EETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             ccccccceeEeeeccccccceeEE-eecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeec
Confidence             00112334566677777777665 57899999999876542  12222           23578999999999999999


Q ss_pred             CCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758         106 QLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM  183 (198)
Q Consensus       106 ~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  183 (198)
                      . ......+  ..+...+.+++|+|++++|++++.||.|++||+.+++.+..+ .+|...|++++|+|++++|++|+.||
T Consensus       257 ~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~H~~~V~~l~~s~d~~~l~s~s~Dg  334 (340)
T d1tbga_         257 A-DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL-AGHDNRVSCLGVTDDGMAVATGSWDS  334 (340)
T ss_dssp             T-TEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred             c-cccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCEEEEEccCC
Confidence            7 4444444  456677999999999999999999999999999999998887 68999999999999999999999999


Q ss_pred             eEEEEe
Q psy8758         184 NLRVWK  189 (198)
Q Consensus       184 ~v~~w~  189 (198)
                      .|++||
T Consensus       335 ~v~iWd  340 (340)
T d1tbga_         335 FLKIWN  340 (340)
T ss_dssp             CEEEEC
T ss_pred             EEEEeC
Confidence            999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-29  Score=175.43  Aligned_cols=184  Identities=16%  Similarity=0.280  Sum_probs=143.4

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|.+ +++++|++|++|+.||.|+|||+.+++.+..+..  |...|.+++|+|+  .+ ++++.|+.+++|+.......
T Consensus        17 ~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~--h~~~V~~v~~~~~--~l-~s~s~D~~~~~~~~~~~~~~   90 (342)
T d2ovrb2          17 DHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--HTGGVWSSQMRDN--II-ISGSTDRTLKVWNAETGECI   90 (342)
T ss_dssp             TSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCC--CSSCEEEEEEETT--EE-EEEETTSCEEEEETTTTEEE
T ss_pred             CceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeC--CCCCEEEEEeCCC--cc-ccceecccccccccccccce
Confidence            35544 3666899999999999999999999987777654  5788999999874  44 45679999999987532100


Q ss_pred             c-------------------------------------------------------------------------------
Q psy8758          82 L-------------------------------------------------------------------------------   82 (198)
Q Consensus        82 ~-------------------------------------------------------------------------------   82 (198)
                      .                                                                               
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~  170 (342)
T d2ovrb2          91 HTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL  170 (342)
T ss_dssp             EEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred             ecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceee
Confidence            0                                                                               


Q ss_pred             ---ccc---------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758          83 ---NVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG  150 (198)
Q Consensus        83 ---~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~  150 (198)
                         ..|         .+..+++++.|+.|++||++. .+++..+..|...+.++++++  ++|++++.|+.|++||+...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~  247 (342)
T d2ovrb2         171 HTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTG  247 (342)
T ss_dssp             EEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTC
T ss_pred             EEEcCcccccccccCCCCEEEEEeCCCeEEEeeccc-ceeeeEecccccceeEEecCC--CEEEEEcCCCEEEEEecccc
Confidence               000         012478999999999999998 678888889999998877764  69999999999999999998


Q ss_pred             ceeeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         151 HSRDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       151 ~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      +....+..  .|...+.++.++  ++++++++.||.|++||+++++.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i  293 (342)
T d2ovrb2         248 QCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI  293 (342)
T ss_dssp             CEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred             cccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEE
Confidence            87776632  345566666664  569999999999999999999875

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=7.7e-29  Score=175.49  Aligned_cols=186  Identities=12%  Similarity=0.134  Sum_probs=145.3

Q ss_pred             cceeEEEECCCCceEEEee--CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISAS--DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      ++|.+++|+++++++++++  .++.+++|+.++++....+..  |...+.+++|+|+++.++++++.|+.+++||.+..+
T Consensus       116 ~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~  193 (325)
T d1pgua1         116 GPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSG--HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK  193 (325)
T ss_dssp             SCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCS--CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred             CcEEEEEECCCCCccceeeccccceEEEEeecccccceeeee--cccccccccccccccceEEEeecccccccccccccc
Confidence            4689999999999988775  467899999988877666654  578899999999998877777899999999986432


Q ss_pred             Cc---------------cccc--cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEc---cCCCEEEEeecC
Q psy8758          80 SP---------------LNVH--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS---PTGREFVAGGYD  139 (198)
Q Consensus        80 ~~---------------~~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~s---p~~~~l~~~~~d  139 (198)
                      ..               +..+  ....+++++.|+.|++||+++ .+.+..+..|..++..+.|+   |++++|++++.|
T Consensus       194 ~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~-~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D  272 (325)
T d1pgua1         194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD  272 (325)
T ss_dssp             EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTT-CCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT
T ss_pred             cceecccccCCCCccEEeeeccccceeccccccccceeeeeecc-ccccccccccccccccceeeeeccCCCEEEEEeCC
Confidence            10               1122  346789999999999999998 68888888888877666665   789999999999


Q ss_pred             CcEEEEEcCCCceeeEEe-ccCcccEEEEEEcCC-CCEEEEecCCCeEEEEec
Q psy8758         140 KSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKA  190 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~-~~~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~  190 (198)
                      +.|+|||+++++++..+. ..+...+..+++.+. +.+|++++.||.|++||+
T Consensus       273 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         273 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            999999999999887763 222223334444332 347889999999999996

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.2e-27  Score=169.61  Aligned_cols=182  Identities=16%  Similarity=0.225  Sum_probs=139.8

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      ++|++|  ++++|++|+.||.|++||+.+++....+..  |..+|.+++|+|+ ..+++ ++.|+.|++|+.........
T Consensus        16 itc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~--H~~~V~~l~~s~~-~~l~s-~s~D~~i~iw~~~~~~~~~~   89 (355)
T d1nexb2          16 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHG-GILVS-GSTDRTVRVWDIKKGCCTHV   89 (355)
T ss_dssp             EEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEEC--CSSCEEEEEEETT-TEEEE-EETTCCEEEEETTTTEEEEE
T ss_pred             EEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEEC--CCCCEEEEEEcCC-CEEEE-Eecccccccccccccccccc
Confidence            456555  688999999999999999999887777654  5788999999986 45554 57999999999865431100


Q ss_pred             ---------------cccCce-----------------------------------------------------------
Q psy8758          84 ---------------VHKDMT-----------------------------------------------------------   89 (198)
Q Consensus        84 ---------------~~~~~~-----------------------------------------------------------   89 (198)
                                     ......                                                           
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  169 (355)
T d1nexb2          90 FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG  169 (355)
T ss_dssp             ECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEE
T ss_pred             cccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccccccc
Confidence                           011122                                                           


Q ss_pred             ----EEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEE
Q psy8758          90 ----SAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT  165 (198)
Q Consensus        90 ----~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~  165 (198)
                          ++.+..|+.+++||+++ .+.+.....+...+.++.++|+++.+++++.|+.|++||++++..+..+ .+|...|.
T Consensus       170 ~~~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~v~  247 (355)
T d1nexb2         170 HGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL-QGHTALVG  247 (355)
T ss_dssp             ETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCCC
T ss_pred             ccceeeeecccceeeeeeccc-ccceeeeeccccccccccccccceeeecccccceEEeeecccccccccc-cccccccc
Confidence                34444555555555554 3445555667778889999999999999999999999999999988877 68889999


Q ss_pred             EEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         166 HTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       166 ~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      +++|++  ++|++++.||.|++||++++++
T Consensus       248 ~~~~~~--~~l~~~~~dg~i~iwd~~~~~~  275 (355)
T d1nexb2         248 LLRLSD--KFLVSAAADGSIRGWDANDYSR  275 (355)
T ss_dssp             EEEECS--SEEEEECTTSEEEEEETTTCCE
T ss_pred             cccccc--ceeeeeecccccccccccccce
Confidence            999864  6899999999999999988764

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=2.1e-27  Score=165.72  Aligned_cols=159  Identities=18%  Similarity=0.358  Sum_probs=126.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .+.+++|+|+++++++++.|+.+++||+.+++. ..+....|...|.+++|+|+++.+++ ++.|+.|++||+.+...  
T Consensus       138 ~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~i~~~~~~~~~~--  213 (299)
T d1nr0a2         138 NSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV-SEVKTIVHPAEITSVAFSNNGAFLVA-TDQSRKVIPYSVANNFE--  213 (299)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEEEETTEE-EEEEEEECSSCEEEEEECTTSSEEEE-EETTSCEEEEEGGGTTE--
T ss_pred             ccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc-ccccccccccccccccc--
Confidence            567899999999999999999999999987653 33444457888999999999998876 46889999998875311  


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE-ecc-C
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY-HTK-R  160 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~-~~~-~  160 (198)
                                               ......+..|..+|++++|+|++++|++++.|+.|++||++++...... ... +
T Consensus       214 -------------------------~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~  268 (299)
T d1nr0a2         214 -------------------------LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA  268 (299)
T ss_dssp             -------------------------ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSST
T ss_pred             -------------------------ccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCC
Confidence                                     1223445678899999999999999999999999999999987654433 223 3


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ...+..+.| +++++|++++.|+.|++||+.
T Consensus       269 ~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         269 MSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             TSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             CCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            456766655 567789999999999999984

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=6.9e-28  Score=167.38  Aligned_cols=180  Identities=13%  Similarity=0.134  Sum_probs=135.1

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++|+|    |++|+.||.|++||+.++.       ..|...|.++.++++.. +++ ++.|+++++|++......
T Consensus        14 ~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-------~~h~~~V~~~~~~~~~~-~~s-~s~D~~v~~w~~~~~~~~   80 (287)
T d1pgua2          14 KGITALTVNP----LISGSYDGRIMEWSSSSMH-------QDHSNLIVSLDNSKAQE-YSS-ISWDDTLKVNGITKHEFG   80 (287)
T ss_dssp             SCEEEEETTT----TEEEETTSCEEETTTTEEE-------CCCCSCEEEEECCSTTC-CEE-EETTTEEEETTEEEEECS
T ss_pred             CceEEEEECc----EEEEeCCCeEEEEECCCCC-------CCCCCCEEEEEecCCCe-EEE-Eeeccccccccccccccc
Confidence            6899999997    8999999999999986432       13567788999887654 444 568889999986532100


Q ss_pred             -----c-------------------------------cc--------ccCceEEEecC-CCcEEEEEccCCCcceeeecC
Q psy8758          82 -----L-------------------------------NV--------HKDMTSAAANE-DFNLYSYDIRQLNSPLNVHKD  116 (198)
Q Consensus        82 -----~-------------------------------~~--------~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~~  116 (198)
                           +                               ..        ..+..+++++. ++.+++|++............
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~  160 (287)
T d1pgua2          81 SQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP  160 (287)
T ss_dssp             SCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC
T ss_pred             cceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeeeeeccccceeeeeeec
Confidence                 0                               00        01123444444 457999998763222333345


Q ss_pred             CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC----------CCEEEEecCCCeEE
Q psy8758         117 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD----------NKFVISASDEMNLR  186 (198)
Q Consensus       117 ~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~----------~~~l~~~~~dg~v~  186 (198)
                      +...+++++|+|++++|++++.|+.|++||+.+++.......+|...|.+++|+|+          +.+|++++.|+.|+
T Consensus       161 ~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~  240 (287)
T d1pgua2         161 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF  240 (287)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred             cCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEE
Confidence            77889999999999999999999999999999988766555788899999999875          46899999999999


Q ss_pred             EEecCCCc
Q psy8758         187 VWKAHASE  194 (198)
Q Consensus       187 ~w~~~~~~  194 (198)
                      +||++++.
T Consensus       241 iw~~~~~~  248 (287)
T d1pgua2         241 IYSVKRPM  248 (287)
T ss_dssp             EEESSCTT
T ss_pred             EEECCCCC
Confidence            99997643

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.3e-26  Score=158.87  Aligned_cols=179  Identities=16%  Similarity=0.264  Sum_probs=140.8

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..|+|++  ++|++|++|+.||.|+|||+.+++....+..  |...|.+++|+  ++++++ |+.|+.+++|++......
T Consensus        16 ~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~--H~~~V~~v~~~--~~~l~s-~s~D~~i~~~~~~~~~~~   88 (293)
T d1p22a2          16 KGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTG--HTGSVLCLQYD--ERVIIT-GSSDSTVRVWDVNTGEML   88 (293)
T ss_dssp             CCEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEEECC--CSSCEEEEECC--SSEEEE-EETTSCEEEEESSSCCEE
T ss_pred             CCEEEEE--EcCCEEEEEeCCCeEEEEECCCCcEEEEEec--CCCCEeeeecc--cceeec-cccccccccccccccccc
Confidence            3577765  5799999999999999999999887777764  57789988874  566655 679999999998654311


Q ss_pred             cc---------------------------------------------ccc---------CceEEEecCCCcEEEEEccCC
Q psy8758          82 LN---------------------------------------------VHK---------DMTSAAANEDFNLYSYDIRQL  107 (198)
Q Consensus        82 ~~---------------------------------------------~~~---------~~~~~~~~~~~~i~~~d~~~~  107 (198)
                      ..                                             .+.         ...+++++.|+.+++||+++ 
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~-  167 (293)
T d1p22a2          89 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTST-  167 (293)
T ss_dssp             EEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTT-
T ss_pred             ccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeeecCCC-
Confidence            00                                             000         12367888999999999998 


Q ss_pred             CcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      .+++..+.++...+..+.++  +..+++++.|+.|++||+++...+... .++...+..  +++++.+|++++.||.|++
T Consensus       168 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~--~~~~~~~l~sg~~dg~i~i  242 (293)
T d1p22a2         168 CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRC--IRFDNKRIVSGAYDGKIKV  242 (293)
T ss_dssp             CCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEE--EECCSSEEEEEETTSCEEE
T ss_pred             CcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccceeeeee-cccceeeee--ccccceEEEEEcCCCEEEE
Confidence            67788888888888877765  568999999999999999999888776 566667754  5678889999999999999


Q ss_pred             EecCCC
Q psy8758         188 WKAHAS  193 (198)
Q Consensus       188 w~~~~~  193 (198)
                      ||+.++
T Consensus       243 wd~~~~  248 (293)
T d1p22a2         243 WDLVAA  248 (293)
T ss_dssp             EEHHHH
T ss_pred             EECCCC
Confidence            998653

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=4e-27  Score=170.57  Aligned_cols=140  Identities=12%  Similarity=0.124  Sum_probs=105.8

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee----eecCceeeEEeCCCCCeEEEEecCCc---cEEEEec
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPMEAFVFTAANEDF---NLYSYDI   75 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~d~---~i~~~d~   75 (198)
                      .+.+++|+|++ +|++|+.|+.|++||+.+++....+...    .|..+|.+++|+|++++|+++ +.|+   .|++||+
T Consensus       186 ~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sg-s~D~t~~~i~lwd~  263 (393)
T d1sq9a_         186 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCITLYET  263 (393)
T ss_dssp             CCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEEEEEET
T ss_pred             cEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeee-cCCCCcceeeeccc
Confidence            47899999998 8899999999999999988766554332    267889999999999998775 4665   4889998


Q ss_pred             cCCCCccccccCceEEEecCCCcEEEEEcc-CCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758          76 RQLNSPLNVHKDMTSAAANEDFNLYSYDIR-QLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                      ++...                  +..+... ........+.+|...|++++|+|++++|++++.|++|++||+.+++++.
T Consensus       264 ~~g~~------------------~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~  325 (393)
T d1sq9a_         264 EFGER------------------IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT  325 (393)
T ss_dssp             TTCCE------------------EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred             cccee------------------eeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEE
Confidence            76421                  1111111 0123344556899999999999999999999999999999999999988


Q ss_pred             EEeccCccc
Q psy8758         155 IYHTKRMQH  163 (198)
Q Consensus       155 ~~~~~~~~~  163 (198)
                      .+ .+|...
T Consensus       326 ~l-~gH~~~  333 (393)
T d1sq9a_         326 TL-NMHCDD  333 (393)
T ss_dssp             EE-ECCGGG
T ss_pred             EE-CCcCCc
Confidence            87 566543

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.6e-25  Score=158.50  Aligned_cols=186  Identities=16%  Similarity=0.207  Sum_probs=137.9

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ++|++++|+|+ .+|++++.|+.|++|+....+..................+.+++..+++ ++.|+.|++||++.....
T Consensus        54 ~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~iw~~~~~~~~  131 (355)
T d1nexb2          54 GGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVT-GSRDNTLHVWKLPKESSV  131 (355)
T ss_dssp             SCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEE-EETTSEEEEEECCC----
T ss_pred             CCEEEEEEcCC-CEEEEEecccccccccccccccccccccccccccccccccccccceeee-ecCCCcEEEEEccCCcee
Confidence            57999999985 5799999999999999987765544443333333455566777666655 468888888887532100


Q ss_pred             -----------------------------------------------------------------cc-----------cc
Q psy8758          82 -----------------------------------------------------------------LN-----------VH   85 (198)
Q Consensus        82 -----------------------------------------------------------------~~-----------~~   85 (198)
                                                                                       ..           ..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  211 (355)
T d1nexb2         132 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH  211 (355)
T ss_dssp             -------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred             ccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccc
Confidence                                                                             00           00


Q ss_pred             cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEE
Q psy8758          86 KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT  165 (198)
Q Consensus        86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~  165 (198)
                      ....+++++.|+.|++||+++ +..+..+.+|...|.+++++|  ++|++++.||.|++||+++.......   |...+.
T Consensus       212 ~~~~~~~~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~  285 (355)
T d1nexb2         212 ERKRCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKFSY---HHTNLS  285 (355)
T ss_dssp             TTTEEEEEETTSCEEEEETTT-CCEEEEECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEEEE---ECTTCC
T ss_pred             cceeeecccccceEEeeeccc-ccccccccccccccccccccc--ceeeeeecccccccccccccceeccc---ccCCce
Confidence            123588899999999999998 788888999999999999874  69999999999999999988765543   333444


Q ss_pred             E-EEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         166 H-TVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       166 ~-~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      . ..++++++++++++ ||.|++||+++++++
T Consensus       286 ~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~  316 (355)
T d1nexb2         286 AITTFYVSDNILVSGS-ENQFNIYNLRSGKLV  316 (355)
T ss_dssp             CCCEEEECSSEEEEEE-TTEEEEEETTTCCBC
T ss_pred             EEEEEcCCCCEEEEEe-CCEEEEEECCCCCEE
Confidence            4 45677888777665 899999999999876

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=1.8e-25  Score=163.44  Aligned_cols=194  Identities=9%  Similarity=-0.001  Sum_probs=139.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeee--eeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGP--IRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .+..++|||||+++++++.|+.+++||+.+++....  +... .+...+.+++|+|||+++++++..++.+.+||.....
T Consensus        63 ~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~  142 (426)
T d1hzua2          63 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE  142 (426)
T ss_dssp             SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred             CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccc
Confidence            578999999999999999999999999998864332  2221 2344567888999999998887789999999976432


Q ss_pred             Cc--------------ccccc----------C---------------------------------------------c--
Q psy8758          80 SP--------------LNVHK----------D---------------------------------------------M--   88 (198)
Q Consensus        80 ~~--------------~~~~~----------~---------------------------------------------~--   88 (198)
                      ..              +....          .                                             .  
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  222 (426)
T d1hzua2         143 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFM  222 (426)
T ss_dssp             EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEE
T ss_pred             eeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEE
Confidence            10              00000          0                                             0  


Q ss_pred             ---------------------------------------------eEEEecCCCcEEEEEccCC------CcceeeecCC
Q psy8758          89 ---------------------------------------------TSAAANEDFNLYSYDIRQL------NSPLNVHKDM  117 (198)
Q Consensus        89 ---------------------------------------------~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~  117 (198)
                                                                   ..+....++.+.+|+....      .+....+++|
T Consensus       223 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~  302 (426)
T d1hzua2         223 TAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ  302 (426)
T ss_dssp             EEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred             eeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecC
Confidence                                                         0122334556666665431      2445667788


Q ss_pred             CcceEEEEEccCCCEEEE-------eecCCcEEEEEcCCCceeeEEe--------ccCcccEEEEEEcCCCCEEEEe---
Q psy8758         118 TSAVTSVDYSPTGREFVA-------GGYDKSLRLYLAHQGHSRDIYH--------TKRMQHVTHTVWSLDNKFVISA---  179 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~~-------~~~d~~v~v~d~~~~~~~~~~~--------~~~~~~v~~~~~s~~~~~l~~~---  179 (198)
                      ...+..++|+|++++|++       ++.+++|++||+.+++....+.        ..+...+.+++|||||++++.+   
T Consensus       303 ~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~  382 (426)
T d1hzua2         303 GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWN  382 (426)
T ss_dssp             SSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECC
T ss_pred             CCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEec
Confidence            888999999999999995       4567899999999988765541        2445679999999999976432   


Q ss_pred             --cCCCeEEEEecCCCccc
Q psy8758         180 --SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       180 --~~dg~v~~w~~~~~~~~  196 (198)
                        +.+|.|+|||.+|+++.
T Consensus       383 ~~~~~~~i~v~D~~T~k~~  401 (426)
T d1hzua2         383 GKNDSSALVVVDDKTLKLK  401 (426)
T ss_dssp             CTTSCCEEEEEETTTTEEE
T ss_pred             CCCCCCeEEEEECCCCeEE
Confidence              46889999999998753

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.6e-24  Score=150.22  Aligned_cols=185  Identities=14%  Similarity=0.165  Sum_probs=132.2

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCce---ee----------------------------eeeeeeecCceee
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK---LG----------------------------PIRKVVMSLRSNM   50 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~---~~----------------------------~~~~~~~~~~v~~   50 (198)
                      ..|.++++++++ .+++++.|+++++|++...+.   +.                            .+......  ...
T Consensus        47 ~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  123 (287)
T d1pgua2          47 NLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN--SPG  123 (287)
T ss_dssp             SCEEEEECCSTT-CCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCE
T ss_pred             CCEEEEEecCCC-eEEEEeeccccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeecccc--cee
Confidence            357788887654 467777888888887643210   00                            01111111  234


Q ss_pred             EEeCCCCCeEEEEecCCccEEEEeccCCCCc-------------ccc-ccCceEEEecCCCcEEEEEccCCCcceeeecC
Q psy8758          51 VSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-------------LNV-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD  116 (198)
Q Consensus        51 ~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-------------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~  116 (198)
                      .+++|++..+++++..++.+++|++......             +.. +.+..+++++.|+.|++||+.+.......+..
T Consensus       124 ~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~  203 (287)
T d1pgua2         124 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF  203 (287)
T ss_dssp             EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC
T ss_pred             eeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccc
Confidence            5667788888877666678999997632211             111 23457999999999999999873333445678


Q ss_pred             CCcceEEEEEccC----------CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEE
Q psy8758         117 MTSAVTSVDYSPT----------GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLR  186 (198)
Q Consensus       117 ~~~~i~~~~~sp~----------~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~  186 (198)
                      |...|.+++|+|+          +.++++++.|+.|++||++++........+|...|++++|+|++ .|++++.|+.|+
T Consensus       204 h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~  282 (287)
T d1pgua2         204 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIK  282 (287)
T ss_dssp             CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEE
T ss_pred             cccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEE
Confidence            8999999999875          45899999999999999988655555557899999999999986 578889999999


Q ss_pred             EEec
Q psy8758         187 VWKA  190 (198)
Q Consensus       187 ~w~~  190 (198)
                      +|++
T Consensus       283 iW~i  286 (287)
T d1pgua2         283 RWNV  286 (287)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-24  Score=149.88  Aligned_cols=176  Identities=19%  Similarity=0.181  Sum_probs=133.2

Q ss_pred             ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc-
Q psy8758           9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH-   85 (198)
Q Consensus         9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~-   85 (198)
                      +.+....+++++.|+.+++||....+....+..  +...  ...+.+++..+++ ++.|+.|++||++.....  +..| 
T Consensus       143 ~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~--~~~~~~~~~~l~s-~~~dg~i~~~d~~~~~~~~~~~~~~  217 (342)
T d2ovrb2         143 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG--HTNR--VYSLQFDGIHVVS-GSLDTSIRVWDVETGNCIHTLTGHQ  217 (342)
T ss_dssp             EEECSSCEEEEETTSCEEEEEGGGTEEEEEECC--CSSC--EEEEEECSSEEEE-EETTSCEEEEETTTCCEEEEECCCC
T ss_pred             eccccceeeeecCCCeEEEeecccceeeEEEcC--cccc--cccccCCCCEEEE-EeCCCeEEEeecccceeeeEecccc
Confidence            445566788899999999999987765555443  2333  4445556777765 579999999999865432  2222 


Q ss_pred             --------cCceEEEecCCCcEEEEEccCCCcceeeecC---CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceee
Q psy8758          86 --------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD  154 (198)
Q Consensus        86 --------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~  154 (198)
                              .+.++++++.|+.|++||+.. .+....+..   |...+.+++++  ++++++++.||.|++||+++++.+.
T Consensus       218 ~~v~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~  294 (342)
T d2ovrb2         218 SLTSGMELKDNILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIR  294 (342)
T ss_dssp             SCEEEEEEETTEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             cceeEEecCCCEEEEEcCCCEEEEEeccc-ccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEE
Confidence                    235789999999999999987 455555543   45566666664  5799999999999999999999877


Q ss_pred             EEe----ccCcccEEEEEEcCCCCEEEEecCCCe----EEEEecCC
Q psy8758         155 IYH----TKRMQHVTHTVWSLDNKFVISASDEMN----LRVWKAHA  192 (198)
Q Consensus       155 ~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~----v~~w~~~~  192 (198)
                      .+.    .+|...|++++|+|++.+|++|+.||+    |++||++.
T Consensus       295 ~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         295 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             EEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            663    356778999999999999999998885    99999864

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.93  E-value=9.6e-25  Score=155.27  Aligned_cols=183  Identities=15%  Similarity=0.091  Sum_probs=146.5

Q ss_pred             eeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-cEEEEeccCCCCc
Q psy8758           4 VTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-NLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~~d~~~~~~~   81 (198)
                      ...-.||| ||+++|+++ +|.|++||+.++...+    ..|...|.+++|+||++.|++++..++ .+++||.+.....
T Consensus         5 ~~~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~----~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~   79 (360)
T d1k32a3           5 KFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK----VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE   79 (360)
T ss_dssp             GGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE----CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             hhcccccCCCCCEEEEEE-CCeEEEEECCCCcEEE----ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE
Confidence            45678999 999999886 4799999998776432    246788999999999999988775554 6899999865421


Q ss_pred             -cccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee----------cC
Q psy8758          82 -LNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YD  139 (198)
Q Consensus        82 -~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~d  139 (198)
                       +..|           .+..+++++.++.+++|++.. .+....+..+...+.+++|+|+|++|+.+.          .+
T Consensus        80 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~  158 (360)
T d1k32a3          80 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM  158 (360)
T ss_dssp             ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCE
T ss_pred             EeeCCCceEEeeeecccccccceeccccccccccccc-cceeeeeecccccccchhhccceeeeeeeccccccceeeccc
Confidence             1122           335788999999999999988 677777888888999999999999998654          34


Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE  194 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~  194 (198)
                      +.+++||+.+++.....  .+...+..++|+|||++|++++.++.+.+|+.....
T Consensus       159 ~~~~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~  211 (360)
T d1k32a3         159 QAIHVYDMEGRKIFAAT--TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN  211 (360)
T ss_dssp             EEEEEEETTTTEEEECS--CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSC
T ss_pred             cceeeeccccCceeeec--ccccccccccccCCCCEEEEEeCCCceEcccccccc
Confidence            56999999988765543  556788899999999999999999999999976543

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.92  E-value=5.3e-23  Score=146.17  Aligned_cols=141  Identities=9%  Similarity=0.006  Sum_probs=104.8

Q ss_pred             cceeEEEECCCCceEEEeeCCC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.|.+++|+|||++|++++.+.  .|++||+.+++.. .+.  .+...+.+++|+|++++++++ +.++.+++|++....
T Consensus        43 ~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~--~~~~~v~~~~~spdg~~l~~~-~~~~~~~~~~~~~~~  118 (360)
T d1k32a3          43 LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFE--ENLGNVFAMGVDRNGKFAVVA-NDRFEIMTVDLETGK  118 (360)
T ss_dssp             SCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECC--CCCCSEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC
T ss_pred             CCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-Eee--CCCceEEeeeeccccccccee-ccccccccccccccc
Confidence            4689999999999998776553  7899999877643 332  357789999999999999875 589999999997654


Q ss_pred             Cc--cccc-----------cCceEEE----------ecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758          80 SP--LNVH-----------KDMTSAA----------ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG  136 (198)
Q Consensus        80 ~~--~~~~-----------~~~~~~~----------~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  136 (198)
                      ..  +..+           .+..++.          +..++.+++||+..  .....+..+...+..++|+|+|+.|+++
T Consensus       119 ~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~  196 (360)
T d1k32a3         119 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG--RKIFAATTENSHDYAPAFDADSKNLYYL  196 (360)
T ss_dssp             EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT--TEEEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred             eeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeecccc--CceeeecccccccccccccCCCCEEEEE
Confidence            21  1111           1123332          33455688999986  3344555677788899999999999999


Q ss_pred             ecCCcEEEEEcC
Q psy8758         137 GYDKSLRLYLAH  148 (198)
Q Consensus       137 ~~d~~v~v~d~~  148 (198)
                      +.++.+.+|+..
T Consensus       197 s~~~~~~~~d~~  208 (360)
T d1k32a3         197 SYRSLDPSPDRV  208 (360)
T ss_dssp             ESCCCCCEECSS
T ss_pred             eCCCceEccccc
Confidence            999988888753

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=2.6e-24  Score=151.21  Aligned_cols=186  Identities=8%  Similarity=-0.008  Sum_probs=118.8

Q ss_pred             cceeEEEECCC-CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      ++|.+++|+|+ +.+|++|+.|+.+++|++............ +........+.++...+++ ++.++.+++||++....
T Consensus        57 ~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~wd~~~~~~  134 (342)
T d1yfqa_          57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNN-EANLGICRICKYGDDKLIA-ASWDGLIEVIDPRNYGD  134 (342)
T ss_dssp             SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSC-CCCSCEEEEEEETTTEEEE-EETTSEEEEECHHHHTT
T ss_pred             CCEEEEEEeCCCCCEEEEcccccceeeeeccccccccccccc-ccccccccccccccccccc-cccccccceeecccccc
Confidence            57999999986 468999999999999999876544333322 1222223333444444443 34666677776542111


Q ss_pred             cc-------------------ccccC----------------------------------------------ceEEEecC
Q psy8758          81 PL-------------------NVHKD----------------------------------------------MTSAAANE   95 (198)
Q Consensus        81 ~~-------------------~~~~~----------------------------------------------~~~~~~~~   95 (198)
                      ..                   .....                                              ..+++++.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  214 (342)
T d1yfqa_         135 GVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI  214 (342)
T ss_dssp             BCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred             ceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecC
Confidence            00                   00111                                              23444555


Q ss_pred             CCcEEEEEccCCCcce--------------eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc
Q psy8758          96 DFNLYSYDIRQLNSPL--------------NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM  161 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~--------------~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~  161 (198)
                      ||.+.+|+........              .....|...+++++|+|++++|++|+.||.|++||+++++.+..+...| 
T Consensus       215 dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~-  293 (342)
T d1yfqa_         215 DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-  293 (342)
T ss_dssp             TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-
T ss_pred             CCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC-
Confidence            5555555543211000              0112345568899999999999999999999999999998887764333 


Q ss_pred             ccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         162 QHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                       .+..++|+|+++++++++.|+.+++|...
T Consensus       294 -~~~~~~~s~~~~~l~~a~sdd~~~~~~~~  322 (342)
T d1yfqa_         294 -EDSVVKIACSDNILCLATSDDTFKTNAAI  322 (342)
T ss_dssp             -SSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred             -CCEEEEEEeCCCEEEEEEcCCcEEEeeee
Confidence             45567888999999998888887777653

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.5e-23  Score=140.48  Aligned_cols=177  Identities=18%  Similarity=0.324  Sum_probs=128.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee----------------------------------------
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK----------------------------------------   41 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~----------------------------------------   41 (198)
                      ++|.+++|  ++++|++|+.|+.+++|++..+........                                        
T Consensus        56 ~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (293)
T d1p22a2          56 GSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRV  133 (293)
T ss_dssp             SCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEE
T ss_pred             CCEeeeec--ccceeecccccccccccccccccccccccccccccccccccccceeecccccceeEeecccccccccccc
Confidence            46888877  578999999999999999876542211100                                        


Q ss_pred             -eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc---------cCceEEEecCCCcEEEEEccCCCc
Q psy8758          42 -VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH---------KDMTSAAANEDFNLYSYDIRQLNS  109 (198)
Q Consensus        42 -~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~  109 (198)
                       ..+...+..+.+.  ...+++ ++.|+.+++||.++....  +..+         .+..+++++.|+.|++||+++ ..
T Consensus       134 ~~~~~~~v~~~~~~--~~~~~~-~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~  209 (293)
T d1p22a2         134 LVGHRAAVNVVDFD--DKYIVS-ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC-GA  209 (293)
T ss_dssp             ECCCSSCEEEEEEE--TTEEEE-EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTT-CC
T ss_pred             ccccccccccceec--cccccc-ccCCCceeeecCCCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEeccc-ce
Confidence             0012223333332  334444 568999999999865432  2222         235689999999999999998 67


Q ss_pred             ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC---------ceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758         110 PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG---------HSRDIYHTKRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       110 ~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      .+.....+...+..  +++++.+|++++.||.|++||+...         ..+..+ .+|.+.|++++|+  +++|++++
T Consensus       210 ~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~H~~~V~~v~~d--~~~l~s~s  284 (293)
T d1p22a2         210 CLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-VEHSGRVFRLQFD--EFQIVSSS  284 (293)
T ss_dssp             EEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-CCCSSCCCCEEEC--SSCEEECC
T ss_pred             eeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEe-cCCCCCEEEEEEc--CCEEEEEe
Confidence            77888888877765  5667889999999999999998642         233333 6899999999984  57899999


Q ss_pred             CCCeEEEEe
Q psy8758         181 DEMNLRVWK  189 (198)
Q Consensus       181 ~dg~v~~w~  189 (198)
                      .||+|++||
T Consensus       285 ~Dg~i~iWD  293 (293)
T d1p22a2         285 HDDTILIWD  293 (293)
T ss_dssp             SSSEEEEEC
T ss_pred             cCCEEEEeC
Confidence            999999998

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=1.7e-23  Score=147.90  Aligned_cols=187  Identities=13%  Similarity=0.127  Sum_probs=132.0

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc----
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL----   82 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~----   82 (198)
                      ++|+++++++++++.++.|.+||+.+++....+.. .+...+.+++|+||++++++++..++.|.+||+.+.+...    
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~-~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~   80 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   80 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEc-CCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecc
Confidence            57899999999999999999999999887666543 2344578999999999998888889999999986542100    


Q ss_pred             --------------cccc-C----------------------------------------------ceEEEecCCCc---
Q psy8758          83 --------------NVHK-D----------------------------------------------MTSAAANEDFN---   98 (198)
Q Consensus        83 --------------~~~~-~----------------------------------------------~~~~~~~~~~~---   98 (198)
                                    .... +                                              ..++..+.++.   
T Consensus        81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (346)
T d1jmxb_          81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV  160 (346)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred             cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE
Confidence                          0000 0                                              00111111211   


Q ss_pred             ----EEEEE-------------------------------------------------------------------ccCC
Q psy8758          99 ----LYSYD-------------------------------------------------------------------IRQL  107 (198)
Q Consensus        99 ----i~~~d-------------------------------------------------------------------~~~~  107 (198)
                          +.+|+                                                                   +...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
T d1jmxb_         161 AGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTG  240 (346)
T ss_dssp             ESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTC
T ss_pred             eCCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCC
Confidence                22233                                                                   2221


Q ss_pred             CcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      .........+...+..+.++|++.+++.... +.+.+||..+++.+..+..+  ..+.+++|+|||++|++++.|+.|++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~~--~~~~~va~s~DG~~l~v~~~d~~v~v  317 (346)
T d1jmxb_         241 KTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANLD--HTYYCVAFDKKGDKLYLGGTFNDLAV  317 (346)
T ss_dssp             CEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEECS--SCCCEEEECSSSSCEEEESBSSEEEE
T ss_pred             ceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEcCC--CCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence            1111222334455677788888887776654 57999999999988877444  57889999999999999999999999


Q ss_pred             EecCCCcccc
Q psy8758         188 WKAHASEKLE  197 (198)
Q Consensus       188 w~~~~~~~~~  197 (198)
                      ||+++++.++
T Consensus       318 ~D~~t~~~i~  327 (346)
T d1jmxb_         318 FNPDTLEKVK  327 (346)
T ss_dssp             EETTTTEEEE
T ss_pred             EECccCCEEE
Confidence            9999998764

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.91  E-value=9.6e-22  Score=136.48  Aligned_cols=189  Identities=12%  Similarity=0.051  Sum_probs=130.6

Q ss_pred             ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      .+..++|+|||++++ +++.++.|++||+.+++....+..   ...+..+.|++++..+++++..++.+.+|+.......
T Consensus        33 ~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (301)
T d1l0qa2          33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA---GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA  109 (301)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeec---cccccccccccccccccccccccceeeecccccceee
Confidence            467899999999875 566789999999998876655543   3456788899998888887777888888887654311


Q ss_pred             c--c-----------cccCceEEEecCCCcEEEEEccCC-----------------------------------------
Q psy8758          82 L--N-----------VHKDMTSAAANEDFNLYSYDIRQL-----------------------------------------  107 (198)
Q Consensus        82 ~--~-----------~~~~~~~~~~~~~~~i~~~d~~~~-----------------------------------------  107 (198)
                      .  .           .....+++++..+..+.+|+..+.                                         
T Consensus       110 ~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (301)
T d1l0qa2         110 GTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT  189 (301)
T ss_dssp             EEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             eeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccceeeecccccccccccccc
Confidence            0  0           111122333344444444443321                                         


Q ss_pred             CcceeeecCCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEE-EEecCCC
Q psy8758         108 NSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV-ISASDEM  183 (198)
Q Consensus       108 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg  183 (198)
                      ........ ....+..++++++++.++.+..   ++.|++||+.+++....+..  ...+.+++|+|||++| ++++.|+
T Consensus       190 ~~~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~--~~~~~~va~spdg~~l~va~~~~~  266 (301)
T d1l0qa2         190 NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV--GPDPAGIAVTPDGKKVYVALSFCN  266 (301)
T ss_dssp             TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTT
T ss_pred             eeeeeccc-ccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcC--CCCEEEEEEeCCCCEEEEEECCCC
Confidence            12222222 2234667889999987765543   46899999999998877633  3578999999999976 5778899


Q ss_pred             eEEEEecCCCcccc
Q psy8758         184 NLRVWKAHASEKLE  197 (198)
Q Consensus       184 ~v~~w~~~~~~~~~  197 (198)
                      .|++||+++++.+.
T Consensus       267 ~i~v~D~~t~~~~~  280 (301)
T d1l0qa2         267 TVSVIDTATNTITA  280 (301)
T ss_dssp             EEEEEETTTTEEEE
T ss_pred             eEEEEECCCCeEEE
Confidence            99999999998753

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.90  E-value=3.1e-22  Score=140.91  Aligned_cols=178  Identities=12%  Similarity=0.011  Sum_probs=126.9

Q ss_pred             ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc---------
Q psy8758          14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV---------   84 (198)
Q Consensus        14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~---------   84 (198)
                      +++++++.|++|++||+++++....+....+...+.+++|+||+++++++++.++.|.+||+.+.+.....         
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            58999999999999999999877777654445567899999999999888888999999998764321000         


Q ss_pred             --------cc--C----------------------------------------------------ceEEEecCCCcEEEE
Q psy8758          85 --------HK--D----------------------------------------------------MTSAAANEDFNLYSY  102 (198)
Q Consensus        85 --------~~--~----------------------------------------------------~~~~~~~~~~~i~~~  102 (198)
                              ..  .                                                    ..+++++  +.+.+|
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~~  159 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG--RDLHVM  159 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES--SSEEEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEc--CCccee
Confidence                    00  0                                                    0122222  223445


Q ss_pred             EccCC----------------------------------------------------------------Cc-ceeeecCC
Q psy8758         103 DIRQL----------------------------------------------------------------NS-PLNVHKDM  117 (198)
Q Consensus       103 d~~~~----------------------------------------------------------------~~-~~~~~~~~  117 (198)
                      |....                                                                +. ....+..+
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T d1pbyb_         160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             eeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCC
Confidence            54321                                                                00 01111223


Q ss_pred             CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         118 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ...+..++++|++.+++..  ++.+++||+.+++.+..+.  +...+.+++|+|||++|++++.|+.|++||.++++.++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~  315 (337)
T d1pbyb_         240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP--LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG  315 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred             CcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence            3445667788888877665  5889999999999988774  34678899999999999999999999999999988763

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.89  E-value=4.3e-21  Score=140.30  Aligned_cols=145  Identities=10%  Similarity=0.015  Sum_probs=102.6

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee--eeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL--GPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .+..++|||||+++++++.|+.+++||+.+++..  ..+... .+...+.+..|+|||++++++++.++.+.+||..+..
T Consensus        63 ~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~  142 (432)
T d1qksa2          63 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE  142 (432)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred             CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCcccc
Confidence            4789999999999999999999999999876532  233321 2344556778899999998888889999999987654


Q ss_pred             Ccc--------------c----------ccc-CceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEE
Q psy8758          80 SPL--------------N----------VHK-DMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREF  133 (198)
Q Consensus        80 ~~~--------------~----------~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l  133 (198)
                      ...              .          .+. ...+++...++.+.+||..+ .+...... .+...+..++|+|+|+++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~-~~~~~~~~i~~g~~~~~~~~spdg~~~  221 (432)
T d1qksa2         143 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD-LNNLKTTEISAERFLHDGGLDGSHRYF  221 (432)
T ss_dssp             EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC-SSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred             ceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccC-CCcceEEEEcccCccccceECCCCCEE
Confidence            210              0          111 12356677788899999876 33333222 344568899999999987


Q ss_pred             EEeec-CCcEEEEEcC
Q psy8758         134 VAGGY-DKSLRLYLAH  148 (198)
Q Consensus       134 ~~~~~-d~~v~v~d~~  148 (198)
                      ++++. ++.+.++|..
T Consensus       222 ~va~~~~~~v~v~d~~  237 (432)
T d1qksa2         222 ITAANARNKLVVIDTK  237 (432)
T ss_dssp             EEEEGGGTEEEEEETT
T ss_pred             EEeccccceEEEeecc
Confidence            76654 4566666665

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.85  E-value=6.2e-19  Score=128.80  Aligned_cols=177  Identities=11%  Similarity=0.068  Sum_probs=134.6

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc-------ccc--
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL-------NVH--   85 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~-------~~~--   85 (198)
                      ++++.+.+|.|.|||..+++.+..+..   ...+..++|+|||++++++ +.|+.+.+||+.+.....       ..+  
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~---g~~~~~v~fSpDG~~l~~~-s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~  109 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIKIGSEARS  109 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeC---CCCeeEEEECCCCCEEEEE-cCCCCEEEEEeeCCCceEEEEEecCCCCCC
Confidence            457889999999999999998777764   3468999999999999875 689999999987654211       011  


Q ss_pred             ----------cCceEEEecCCCcEEEEEccCCCcceeeecCC-----------CcceEEEEEccCCCEE-EEeecCCcEE
Q psy8758          86 ----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-----------TSAVTSVDYSPTGREF-VAGGYDKSLR  143 (198)
Q Consensus        86 ----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~i~~~~~sp~~~~l-~~~~~d~~v~  143 (198)
                                ...+++++..++.+++||..+ .+++..+..+           ......+.++|+|+.+ ++...++.|.
T Consensus       110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~  188 (432)
T d1qksa2         110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL  188 (432)
T ss_dssp             EEECCSTTCTTTEEEEEEEETTEEEEEETTT-CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred             eEEecccCCCCCEEEEEcCCCCeEEEEeCcc-ccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEE
Confidence                      123467888999999999987 5666555432           3446678899999866 4556689999


Q ss_pred             EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCccc
Q psy8758         144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKL  196 (198)
Q Consensus       144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~~  196 (198)
                      +||..+.+........+...+..++|+|+|+++++++ .++.+.++|..+++.+
T Consensus       189 ~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~  242 (432)
T d1qksa2         189 LVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV  242 (432)
T ss_dssp             EEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred             EEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEE
Confidence            9999887765544345557889999999999776654 5678999999877654

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1.9e-17  Score=116.18  Aligned_cols=193  Identities=10%  Similarity=0.119  Sum_probs=119.0

Q ss_pred             cceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeee-eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           2 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIR-KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.+..++|||||++|++++ .|+.|++|++........+. .......+..++|+|+++++++++..++.+.+|+.....
T Consensus        37 ~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~  116 (333)
T d1ri6a_          37 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL  116 (333)
T ss_dssp             SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE
T ss_pred             CCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeecccccc
Confidence            4578999999999886555 58999999998665433332 223445678899999999999887678888888765322


Q ss_pred             Cc----------------cccccCceE-------------------------------------------------EEec
Q psy8758          80 SP----------------LNVHKDMTS-------------------------------------------------AAAN   94 (198)
Q Consensus        80 ~~----------------~~~~~~~~~-------------------------------------------------~~~~   94 (198)
                      ..                +.......+                                                 .+..
T Consensus       117 ~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~  196 (333)
T d1ri6a_         117 PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE  196 (333)
T ss_dssp             EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred             ceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeecc
Confidence            10                000011111                                                 1222


Q ss_pred             CCCcEEEEEccCCCccee---eec------CCCcceEEEEEccCCCEEEEe-ecCCcEEEEEcCCCceeeEE--eccCcc
Q psy8758          95 EDFNLYSYDIRQLNSPLN---VHK------DMTSAVTSVDYSPTGREFVAG-GYDKSLRLYLAHQGHSRDIY--HTKRMQ  162 (198)
Q Consensus        95 ~~~~i~~~d~~~~~~~~~---~~~------~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v~d~~~~~~~~~~--~~~~~~  162 (198)
                      ..+...+++.........   ...      ........++++|++++++.. ..++.+.+|++.........  ......
T Consensus       197 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (333)
T d1ri6a_         197 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET  276 (333)
T ss_dssp             TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred             ccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCC
Confidence            223333333322111111   110      112345678899999866654 55788999998765433222  223345


Q ss_pred             cEEEEEEcCCCCEEEEe-cCCCeEEEEec--CCCc
Q psy8758         163 HVTHTVWSLDNKFVISA-SDEMNLRVWKA--HASE  194 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~-~~dg~v~~w~~--~~~~  194 (198)
                      .+.+++|+|||++|+++ ..++.|.+|++  ++|+
T Consensus       277 ~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~  311 (333)
T d1ri6a_         277 QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL  311 (333)
T ss_dssp             SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred             CeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCc
Confidence            67889999999987765 45689999955  5664

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.81  E-value=4.4e-18  Score=120.58  Aligned_cols=192  Identities=13%  Similarity=0.060  Sum_probs=131.8

Q ss_pred             eeEEEECCCCceEEEe----------eCCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEe-cCC
Q psy8758           4 VTHTVWSLDNKFVISA----------SDEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAA-NED   67 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~----------~~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~-~~d   67 (198)
                      ...++|||||++|++.          ..|+.|++||+.+++....+....     .......++|+|+++.+++.. +.+
T Consensus        49 ~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~  128 (355)
T d2bbkh_          49 LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA  128 (355)
T ss_dssp             SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred             CCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCC
Confidence            4578999999988764          347899999999988666554321     122346789999999887653 345


Q ss_pred             ccEEEEeccCCCCcc--c--------------------------------------------------------cccCce
Q psy8758          68 FNLYSYDIRQLNSPL--N--------------------------------------------------------VHKDMT   89 (198)
Q Consensus        68 ~~i~~~d~~~~~~~~--~--------------------------------------------------------~~~~~~   89 (198)
                      ..+.+|+..+.....  .                                                        ...+..
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (355)
T d2bbkh_         129 PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR  208 (355)
T ss_dssp             CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE
T ss_pred             ceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCe
Confidence            678888876432100  0                                                        001123


Q ss_pred             EEEecCCCcEEEEEccCCCcc-eeeecCC----------CcceEEEEEccCCCEEEEeecC----------CcEEEEEcC
Q psy8758          90 SAAANEDFNLYSYDIRQLNSP-LNVHKDM----------TSAVTSVDYSPTGREFVAGGYD----------KSLRLYLAH  148 (198)
Q Consensus        90 ~~~~~~~~~i~~~d~~~~~~~-~~~~~~~----------~~~i~~~~~sp~~~~l~~~~~d----------~~v~v~d~~  148 (198)
                      ++..+.++.+++|++...... +.....+          ......++++|++..++....+          ..|.+||..
T Consensus       209 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~  288 (355)
T d2bbkh_         209 LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK  288 (355)
T ss_dssp             EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred             EEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCC
Confidence            667788899999998862211 1111111          1223458899999987765443          369999999


Q ss_pred             CCceeeEEeccCcccEEEEEEcCCCC--EEEEecCCCeEEEEecCCCcccc
Q psy8758         149 QGHSRDIYHTKRMQHVTHTVWSLDNK--FVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       149 ~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      +++.+..+..  ...+.+++|+|||+  ++++++.|+.|++||+++++.++
T Consensus       289 t~~~~~~~~~--~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~  337 (355)
T d2bbkh_         289 TGERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR  337 (355)
T ss_dssp             TCCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred             CCcEEEEecC--CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEE
Confidence            9988877633  35688999999998  45677889999999999998764

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.79  E-value=9.1e-17  Score=111.00  Aligned_cols=172  Identities=14%  Similarity=0.082  Sum_probs=130.0

Q ss_pred             EEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--ccc----------
Q psy8758          17 ISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNV----------   84 (198)
Q Consensus        17 ~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~----------   84 (198)
                      ++.+.|+.|.+||+++++....+..   ...+..++|+|++++++++++.++.|.+||+.+....  +..          
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~---g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~~~~~~~~   82 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVS   82 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEEC
T ss_pred             EEECCCCEEEEEECCCCeEEEEEEC---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccccccccccc
Confidence            3456889999999999986666543   4557899999999999888888999999999865432  111          


Q ss_pred             -ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-EeecCCcEEEEEcCCCceeeEEeccCcc
Q psy8758          85 -HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        85 -~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                       .....++++..++.+.+|+..+ .+....+.. .....++.|+|+++.++ ++..++.+.+|+..+......+.  +..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  158 (301)
T d1l0qa2          83 PDGKQVYVTNMASSTLSVIDTTS-NTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS--VGR  158 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTT-TEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CCS
T ss_pred             cccccccccccccceeeeccccc-ceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc--cCC
Confidence             1224567777888999999987 566666654 45678899999999775 55568889999999998887763  335


Q ss_pred             cEEEEEEcCCCCEEEEecC-CCeEEEEecCCCcc
Q psy8758         163 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEK  195 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~-dg~v~~w~~~~~~~  195 (198)
                      .+..+.++|+++.+++++. ++.+.+|+....+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (301)
T d1l0qa2         159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV  192 (301)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             CceEEEeeccccceeeecccccccccccccceee
Confidence            6888999999998776654 46777787766543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.79  E-value=8.4e-17  Score=114.74  Aligned_cols=190  Identities=11%  Similarity=-0.015  Sum_probs=122.4

Q ss_pred             eEEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee-------------------------------
Q psy8758           5 THTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV-------------------------------   43 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~-------------------------------   43 (198)
                      ..++|+|||+++++++          .++.|.+||..+++....+....                               
T Consensus        69 ~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~  148 (373)
T d2madh_          69 PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP  148 (373)
T ss_pred             ccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCC
Confidence            3689999999998874          45789999998876543321100                               


Q ss_pred             --------------ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc------------------cccccCceEE
Q psy8758          44 --------------MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP------------------LNVHKDMTSA   91 (198)
Q Consensus        44 --------------~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~------------------~~~~~~~~~~   91 (198)
                                    +.....++.++|+++.++++.+.|+.+.+|+.......                  ........++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (373)
T d2madh_         149 AVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV  228 (373)
T ss_pred             ceEEeeccCCeEEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEE
Confidence                          01112355566777766666667777777776543211                  0111223355


Q ss_pred             EecCCCcEEEEEccCCCcce--eeecC----------CCcceEEEEEccCCCEEE----------EeecCCcEEEEEcCC
Q psy8758          92 AANEDFNLYSYDIRQLNSPL--NVHKD----------MTSAVTSVDYSPTGREFV----------AGGYDKSLRLYLAHQ  149 (198)
Q Consensus        92 ~~~~~~~i~~~d~~~~~~~~--~~~~~----------~~~~i~~~~~sp~~~~l~----------~~~~d~~v~v~d~~~  149 (198)
                      ..+.++.+.+|+.... ...  .....          .......++++|++..++          ....++.+.+||..+
T Consensus       229 ~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t  307 (373)
T d2madh_         229 WPVYSGKILQADISAA-GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV  307 (373)
T ss_pred             EecCCceEEEEEcCCC-eEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCC
Confidence            5566777777776652 111  11111          112334566777766544          344567899999999


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCE--EEEecCCCeEEEEecCCCcccc
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKF--VISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~--l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ++.+..+  .+...+..++|+|||+.  +++++.|+.|++||+.+++.++
T Consensus       308 ~~~~~~~--~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~  355 (373)
T d2madh_         308 GQTSSQI--SLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ  355 (373)
T ss_pred             CcEEEEe--cCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEE
Confidence            9988876  34467899999999984  4678899999999999999864

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=1.6e-16  Score=115.56  Aligned_cols=183  Identities=11%  Similarity=0.093  Sum_probs=128.7

Q ss_pred             ECCCCc--eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc----
Q psy8758           9 WSLDNK--FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL----   82 (198)
Q Consensus         9 ~s~~~~--~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~----   82 (198)
                      ++.+.+  ++++.+.||.|++||+.+++.+..+..   ...+..++|+|||++++++ +.|+.+++||+.+.+...    
T Consensus        26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~---g~~~~~vafSPDGk~l~~~-~~d~~v~vwd~~t~~~~~~~~i  101 (426)
T d1hzua2          26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT---GYAVHISRMSASGRYLLVI-GRDARIDMIDLWAKEPTKVAEI  101 (426)
T ss_dssp             SCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEEC---CSSEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCEEEEEE
T ss_pred             ccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeC---CCCeeEEEECCCCCEEEEE-eCCCCEEEEEccCCceeEEEEE
Confidence            444443  557778899999999999987777654   3468899999999999875 589999999997654211    


Q ss_pred             ---ccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcc-----------eEEEEEccCCCEEEEe
Q psy8758          83 ---NVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA-----------VTSVDYSPTGREFVAG  136 (198)
Q Consensus        83 ---~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-----------i~~~~~sp~~~~l~~~  136 (198)
                         ..|            ...+++++..++.+.+||... ..++.....+...           ...+..+++++.++..
T Consensus       102 ~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~  180 (426)
T d1hzua2         102 KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN  180 (426)
T ss_dssp             ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             eCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCc-cceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEe
Confidence               111            123456777899999999988 5666555444333           3455666666655544


Q ss_pred             ec-CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCccc
Q psy8758         137 GY-DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKL  196 (198)
Q Consensus       137 ~~-d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~~  196 (198)
                      .. .+.+.+++............++...+..+.|+|++++++++ ..++.+.+++..+++.+
T Consensus       181 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~  242 (426)
T d1hzua2         181 VKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS  242 (426)
T ss_dssp             ETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEE
T ss_pred             cCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEE
Confidence            33 45566666666554444334666789999999999987765 45678999999887764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=3.5e-17  Score=114.75  Aligned_cols=153  Identities=11%  Similarity=0.236  Sum_probs=112.9

Q ss_pred             eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEec
Q psy8758          15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAAN   94 (198)
Q Consensus        15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~   94 (198)
                      .+++++.|++|++|+++....+..++...+...+..++|+||+++|++++..|+.|.+|++......             
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~-------------   72 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-------------   72 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-------------
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCc-------------
Confidence            4567779999999999876656666666678889999999999999888777889999988653110             


Q ss_pred             CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCCCceeeEE-eccCcccEEEEEEcCC
Q psy8758          95 EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLD  172 (198)
Q Consensus        95 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~  172 (198)
                                    ........+...+..++|+|||++|++++. ++.+.+|+.......... ...+...+.++.++|+
T Consensus        73 --------------~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d  138 (333)
T d1ri6a_          73 --------------LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPD  138 (333)
T ss_dssp             --------------EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTT
T ss_pred             --------------EEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeec
Confidence                          011111223445678999999999988875 678999998876654443 2345567888999999


Q ss_pred             CCEEEEec-CCCeEEEEecCCCc
Q psy8758         173 NKFVISAS-DEMNLRVWKAHASE  194 (198)
Q Consensus       173 ~~~l~~~~-~dg~v~~w~~~~~~  194 (198)
                      +++++.++ .+..+.+|+..+..
T Consensus       139 ~~~~~~~~~~~~~i~~~~~~~~~  161 (333)
T d1ri6a_         139 NRTLWVPALKQDRICLFTVSDDG  161 (333)
T ss_dssp             SSEEEEEEGGGTEEEEEEECTTS
T ss_pred             ceeeeccccccceeeEEEeccCC
Confidence            99877665 45679999886543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.74  E-value=4.9e-17  Score=116.14  Aligned_cols=191  Identities=8%  Similarity=-0.018  Sum_probs=123.4

Q ss_pred             eEEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758           5 THTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAANEDFN   69 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~d~~   69 (198)
                      ..++|+|||+.|++.+          .|+.|++||..+++....+....     .......++|+||+++++++...++.
T Consensus        68 ~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~  147 (368)
T d1mdah_          68 SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA  147 (368)
T ss_dssp             CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred             CcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCe
Confidence            4588999999888754          46789999999888766654321     11223578999999999887667899


Q ss_pred             EEEEeccCCCCcc----------ccccCceEEEecCCCcEEEEEccCC--------------------------------
Q psy8758          70 LYSYDIRQLNSPL----------NVHKDMTSAAANEDFNLYSYDIRQL--------------------------------  107 (198)
Q Consensus        70 i~~~d~~~~~~~~----------~~~~~~~~~~~~~~~~i~~~d~~~~--------------------------------  107 (198)
                      +.+||+.+.+...          .......++..+.||.+..+++...                                
T Consensus       148 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (368)
T d1mdah_         148 AAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVW  227 (368)
T ss_dssp             EEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred             EEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEE
Confidence            9999987654211          0111223334444444444443211                                


Q ss_pred             -------------Ccceeee--cC----------CCcceEEEEEccCCCEEEEeecC---------CcEEEEEcCCCcee
Q psy8758         108 -------------NSPLNVH--KD----------MTSAVTSVDYSPTGREFVAGGYD---------KSLRLYLAHQGHSR  153 (198)
Q Consensus       108 -------------~~~~~~~--~~----------~~~~i~~~~~sp~~~~l~~~~~d---------~~v~v~d~~~~~~~  153 (198)
                                   .......  ..          .......++++|++..++....+         ..|.+||..+++.+
T Consensus       228 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~  307 (368)
T d1mdah_         228 AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS  307 (368)
T ss_dssp             CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE
T ss_pred             ecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEe
Confidence                         1111000  00          00112347788888766554322         35899999999877


Q ss_pred             eEEeccCcccEEEEEEcCCCC--EEEEecCCCeEEEEecCCCcccc
Q psy8758         154 DIYHTKRMQHVTHTVWSLDNK--FVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ..+.  +...+.+++|+|||+  .++++..|+.|++||..+++.++
T Consensus       308 ~~~~--~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~  351 (368)
T d1mdah_         308 GPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS  351 (368)
T ss_dssp             ECCE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred             EEec--CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEE
Confidence            6653  335788999999997  34567789999999999998764

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=3.1e-15  Score=104.56  Aligned_cols=60  Identities=22%  Similarity=0.213  Sum_probs=51.5

Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~  157 (198)
                      ++.+++||+.+ .+.+..+. +...+.+++|+|||++|++++.++.|++||..+++.+..+.
T Consensus       259 ~~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         259 YNVLESFDLEK-NASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             ESEEEEEETTT-TEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             cccEEEEECCC-CcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            57899999998 56666664 45678899999999999999999999999999998887763

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.61  E-value=6.7e-15  Score=108.15  Aligned_cols=152  Identities=16%  Similarity=0.219  Sum_probs=107.1

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee---ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV---MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~   81 (198)
                      ..+.|.+++++++.  .|+.+.+||+.+++....+....   +...+.++.|+||+++|+.+. .  ...+|..      
T Consensus        20 ~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~-~--~~~~~r~------   88 (470)
T d2bgra1          20 YSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY-N--YVKQWRH------   88 (470)
T ss_dssp             CCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEE-E--EEECSSS------
T ss_pred             cCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEE-C--Ccceeee------
Confidence            35789999988764  57789999999887654333221   345688999999999998753 2  1222221      


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc--
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK--  159 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~--  159 (198)
                                  +.++.+++||+.+  ..+..+..+...+..+.|||||+.+|.. .++.+++|+..+++.......+  
T Consensus        89 ------------s~~~~~~l~d~~~--~~~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~  153 (470)
T d2bgra1          89 ------------SYTASYDIYDLNK--RQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKE  153 (470)
T ss_dssp             ------------CEEEEEEEEETTT--TEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBT
T ss_pred             ------------ccCceEEEEECCC--CcccccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCC
Confidence                        1234567777765  3456677788889999999999999986 5678999999988765443111  


Q ss_pred             ---------------CcccEEEEEEcCCCCEEEEecCC
Q psy8758         160 ---------------RMQHVTHTVWSLDNKFVISASDE  182 (198)
Q Consensus       160 ---------------~~~~v~~~~~s~~~~~l~~~~~d  182 (198)
                                     ..+....+.|||||++|+....|
T Consensus       154 ~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN  191 (470)
T ss_dssp             TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             CcccccccceeeeeeecCCccccEECCCCCccceeEec
Confidence                           11234567899999999987544

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.60  E-value=1.4e-13  Score=97.83  Aligned_cols=165  Identities=8%  Similarity=-0.097  Sum_probs=114.2

Q ss_pred             cceeEEEECCCCceEEEe-----eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758           2 QHVTHTVWSLDNKFVISA-----SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR   76 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~   76 (198)
                      +++..++++|||+.++..     +.++.+.+||..+++.+..+..    .....++|+|||++++++......       
T Consensus        21 ~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~----~~~~~~a~SpDG~~l~va~~~~~~-------   89 (373)
T d2madh_          21 GPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG----GFLPNPVAAHSGSEFALASTSFSR-------   89 (373)
T ss_pred             CCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeC----CCCccEEEcCCCCEEEEEeecCCc-------
Confidence            568899999999988764     2346799999999887666543    223479999999999887532211       


Q ss_pred             CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcc-------eEEEEEccCCCEEEEee--cCCcEEEEEc
Q psy8758          77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA-------VTSVDYSPTGREFVAGG--YDKSLRLYLA  147 (198)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-------i~~~~~sp~~~~l~~~~--~d~~v~v~d~  147 (198)
                                   ...+..++.|.+||..+ .+++..+..+...       ...+.|+|+++.++...  .++.+.+|+.
T Consensus        90 -------------~~~~~~~~~v~v~D~~t-~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~  155 (373)
T d2madh_          90 -------------IAKGKRTDYVEVFDPVT-FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQ  155 (373)
T ss_pred             -------------ccccccceEEEEEECCC-CcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeec
Confidence                         12233455666666665 4555555443332       24578999998766554  4568899998


Q ss_pred             CCCceeeEEeccCcccEEEEEEcCCCCE-EEEecCCCeEEEEecCCCccc
Q psy8758         148 HQGHSRDIYHTKRMQHVTHTVWSLDNKF-VISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ...+.....     .....+.++|+|+. +++.+.|+.+.+|+..+++..
T Consensus       156 ~~~~~~~~~-----~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~  200 (373)
T d2madh_         156 GGSSDDQLL-----SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAG  200 (373)
T ss_pred             cCCeEEEEe-----ccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceee
Confidence            887665443     34567889999875 467889999999998876643

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=1.2e-11  Score=83.86  Aligned_cols=185  Identities=12%  Similarity=0.047  Sum_probs=112.6

Q ss_pred             ceeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .+...+|||||+.||.....   ..+.+.+...+.. ..+.  .+........|+|+++.++.....++...++......
T Consensus        40 ~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~  116 (269)
T d2hqsa1          40 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS  116 (269)
T ss_dssp             CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred             ceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEe--eeecccccceecCCCCeeeEeeecCCccceeeccccc
Confidence            45688999999999876433   2466666655543 2222  2356677899999999998876555554444332211


Q ss_pred             Cc---------------cccccCceEEEecCCCc--EEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC--
Q psy8758          80 SP---------------LNVHKDMTSAAANEDFN--LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--  140 (198)
Q Consensus        80 ~~---------------~~~~~~~~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--  140 (198)
                      ..               .........++...++.  +...++..  .................|+|+++.++..+.++  
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~  194 (269)
T d2hqsa1         117 GQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQ  194 (269)
T ss_dssp             CCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCCEECCCSSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred             ccceeeeeccccccccccccccccceecccccCCceEeeeeccc--ccceeeecccccccccccccccceeEEEeecCCc
Confidence            10               01112234445555554  44445443  34444555566777889999999888776543  


Q ss_pred             -cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC---CCeEEEEecCCCcc
Q psy8758         141 -SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD---EMNLRVWKAHASEK  195 (198)
Q Consensus       141 -~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~v~~w~~~~~~~  195 (198)
                       .+.+.+...+...  . ..+........|||||+.|+..+.   ...+++++++.++.
T Consensus       195 ~~i~~~~~~~~~~~--~-~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~  250 (269)
T d2hqsa1         195 QHIAKQDLATGGVQ--V-LSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK  250 (269)
T ss_dssp             EEEEEEETTTCCEE--E-CCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred             eeeeEeecccccce--E-eecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence             3444455444432  2 233456678899999998875443   35688999987654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.51  E-value=1e-13  Score=97.04  Aligned_cols=115  Identities=10%  Similarity=-0.013  Sum_probs=84.9

Q ss_pred             EEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccC
Q psy8758          51 VSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPT  129 (198)
Q Consensus        51 ~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~  129 (198)
                      ++|++++++++++ +.+++|.+||+.+                              .+.+..+. .+...+.+++|+||
T Consensus         2 ~a~~~~~~~l~~~-~~~~~v~v~D~~t------------------------------~~~~~t~~~~~~~~p~~l~~spD   50 (346)
T d1jmxb_           2 PALKAGHEYMIVT-NYPNNLHVVDVAS------------------------------DTVYKSCVMPDKFGPGTAMMAPD   50 (346)
T ss_dssp             CCCCTTCEEEEEE-ETTTEEEEEETTT------------------------------TEEEEEEECSSCCSSCEEEECTT
T ss_pred             ccCCCCCcEEEEE-cCCCEEEEEECCC------------------------------CCEEEEEEcCCCCCcceEEECCC
Confidence            4677777777664 5667777777665                              46677665 34566789999999


Q ss_pred             CCEEE-EeecCCcEEEEEcCCCceeeEEeccC-----cccEEEEEEcCCCCEEEEec------------CCCeEEEEecC
Q psy8758         130 GREFV-AGGYDKSLRLYLAHQGHSRDIYHTKR-----MQHVTHTVWSLDNKFVISAS------------DEMNLRVWKAH  191 (198)
Q Consensus       130 ~~~l~-~~~~d~~v~v~d~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~------------~dg~v~~w~~~  191 (198)
                      |++++ ++..++.|++||+.+++....+....     ...+..++|+|||+++++++            .++.+.+|+..
T Consensus        51 G~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~  130 (346)
T d1jmxb_          51 NRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA  130 (346)
T ss_dssp             SSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred             CCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecc
Confidence            99874 55678999999999998877663321     12456789999999887664            47789999998


Q ss_pred             CCccc
Q psy8758         192 ASEKL  196 (198)
Q Consensus       192 ~~~~~  196 (198)
                      +++..
T Consensus       131 ~~~~~  135 (346)
T d1jmxb_         131 DGLEA  135 (346)
T ss_dssp             GGGGB
T ss_pred             cceee
Confidence            87654

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.46  E-value=1.2e-11  Score=90.56  Aligned_cols=70  Identities=10%  Similarity=0.197  Sum_probs=51.8

Q ss_pred             cceeEEEECCCCceEEEeeC---------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           2 QHVTHTVWSLDNKFVISASD---------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      +.|.++.|||||++|+.++.         ++.+.+||+.+++. ..+..  +...+..+.|+|||+.++..  .++.+++
T Consensus        62 ~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~--~~~~~~~~~~SPDG~~ia~~--~~~~l~~  136 (470)
T d2bgra1          62 HSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEER--IPNNTQWVTWSPVGHKLAYV--WNNDIYV  136 (470)
T ss_dssp             SCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSC--CCTTEEEEEECSSTTCEEEE--ETTEEEE
T ss_pred             CccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc-ccccc--CCccccccccccCcceeeEe--ecccceE
Confidence            35889999999999998753         56788999988763 33333  35667788888888888775  4567777


Q ss_pred             Eecc
Q psy8758          73 YDIR   76 (198)
Q Consensus        73 ~d~~   76 (198)
                      |+..
T Consensus       137 ~~~~  140 (470)
T d2bgra1         137 KIEP  140 (470)
T ss_dssp             ESST
T ss_pred             EECC
Confidence            7654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.45  E-value=9.3e-12  Score=87.51  Aligned_cols=183  Identities=9%  Similarity=-0.061  Sum_probs=118.0

Q ss_pred             cceeEEEECCCCceEEEee-----CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe---------cCC
Q psy8758           2 QHVTHTVWSLDNKFVISAS-----DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA---------NED   67 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~-----~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~d   67 (198)
                      +++.-.+.+|||+.+++..     .+..+.+||..+++.+..+..    +....++|+||+++++++.         ..+
T Consensus         2 ~p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~----g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d   77 (355)
T d2bbkh_           2 EPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG----GFLPNPVVADDGSFIAHASTVFSRIARGERT   77 (355)
T ss_dssp             CCCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE----CSSCEEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred             CCcEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEEC----CCCCceEEcCCCCEEEEEeCCCccccccCCC
Confidence            3555567899999887653     456799999999887665543    2344799999999988753         347


Q ss_pred             ccEEEEeccCCCCccc--c------------------ccCc--eEEEecCCCcEEEEEccCCCcceeeecCCCc------
Q psy8758          68 FNLYSYDIRQLNSPLN--V------------------HKDM--TSAAANEDFNLYSYDIRQLNSPLNVHKDMTS------  119 (198)
Q Consensus        68 ~~i~~~d~~~~~~~~~--~------------------~~~~--~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------  119 (198)
                      +.|++||..+.+....  .                  ..+.  +++..+.+..+.+|+..+ .+.+..+..+..      
T Consensus        78 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  156 (355)
T d2bbkh_          78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-KAFKRMLDVPDCYHIFPT  156 (355)
T ss_dssp             EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-TEEEEEEECCSEEEEEEE
T ss_pred             CEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCC-CcEeeEEecCCcceEeec
Confidence            8899999876542110  0                  0111  233345667888999887 555555543322      


Q ss_pred             -ceEEEEEccCCCEEEEee-cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         120 -AVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       120 -~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                       ....+.++++++.++... .++.+.+++......      .+...+....+++++..++.++.++.+++|++.+++.
T Consensus       157 ~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  228 (355)
T d2bbkh_         157 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP------EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDA  228 (355)
T ss_dssp             ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC------TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSC
T ss_pred             CCcceEEEcCCCCEEEEEecCCCeEEEEecccccc------eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcE
Confidence             233456677766555433 344455555444322      2223445567788888888889999999999987754

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.44  E-value=2.5e-11  Score=86.24  Aligned_cols=177  Identities=10%  Similarity=0.059  Sum_probs=108.4

Q ss_pred             eeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeee---eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           4 VTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRK---VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      +.++.|+|+|+++++.+. ...|.+|+............   .........+.|+|++++++++...+++|.+|+.....
T Consensus       147 ~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~  226 (365)
T d1jofa_         147 IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             ceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence            678999999998888763 45788888754332222222   12345678999999999999988888999999986532


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEccCCCEEEEeec-C-----CcEEEEEcCCCc
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGREFVAGGY-D-----KSLRLYLAHQGH  151 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d-----~~v~v~d~~~~~  151 (198)
                      .....             .+.-..+....  ...............+.++|||++|+++.. +     ..|..|++....
T Consensus       227 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g  293 (365)
T d1jofa_         227 HMPVY-------------THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG  293 (365)
T ss_dssp             CCEEE-------------EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred             ceEEE-------------EeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCC
Confidence            11000             00001111000  000011123344678899999999887643 2     237777776532


Q ss_pred             eeeE-E---e-ccCcccEEEEEEcC-CCCEEEEe-cCCCeEEEEecCCC
Q psy8758         152 SRDI-Y---H-TKRMQHVTHTVWSL-DNKFVISA-SDEMNLRVWKAHAS  193 (198)
Q Consensus       152 ~~~~-~---~-~~~~~~v~~~~~s~-~~~~l~~~-~~dg~v~~w~~~~~  193 (198)
                      .+.. .   . .......+.++++| +|++|+++ ..++.|.+|+++..
T Consensus       294 ~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         294 SIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence            2211 1   1 11234567899998 78977665 56799999987643

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.34  E-value=2.1e-11  Score=87.76  Aligned_cols=175  Identities=11%  Similarity=0.048  Sum_probs=109.7

Q ss_pred             EEEeeCCCeEEEEEccCCceeeeeeeee----------------------------ecCceeeEEeCCCCCeEEEEecCC
Q psy8758          16 VISASDEMNLRVWKAHASEKLGPIRKVV----------------------------MSLRSNMVSWNPMEAFVFTAANED   67 (198)
Q Consensus        16 l~~~~~d~~i~i~~~~~~~~~~~~~~~~----------------------------~~~~v~~~~~~~~~~~~~~~~~~d   67 (198)
                      +++++.+|.|++|++.+++.++.+..+.                            |........++|||++++++...+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            5677889999999999888766654321                            111233444578999999988889


Q ss_pred             ccEEEEeccCCCCc--ccc--c-----------cCceEEEecCCCc------------------EEEEEccCCCcceeee
Q psy8758          68 FNLYSYDIRQLNSP--LNV--H-----------KDMTSAAANEDFN------------------LYSYDIRQLNSPLNVH  114 (198)
Q Consensus        68 ~~i~~~d~~~~~~~--~~~--~-----------~~~~~~~~~~~~~------------------i~~~d~~~~~~~~~~~  114 (198)
                      ..|.++|+.+.+..  ...  .           ....++.+..+..                  +..+|..+ .+...++
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t-~~v~~qI  172 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAET-MDVAWQV  172 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTT-CSEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcc-ceeeEEE
Confidence            99999999875421  110  0           1111222222221                  23466665 3444444


Q ss_pred             cCCCcceEEEEEccCCCEEEEeecC-----------------------------------------CcEEEEEcCCCcee
Q psy8758         115 KDMTSAVTSVDYSPTGREFVAGGYD-----------------------------------------KSLRLYLAHQGHSR  153 (198)
Q Consensus       115 ~~~~~~i~~~~~sp~~~~l~~~~~d-----------------------------------------~~v~v~d~~~~~~~  153 (198)
                      .. ......++++|+|+++++++.+                                         +.+.+++......+
T Consensus       173 ~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~  251 (441)
T d1qnia2         173 IV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFT  251 (441)
T ss_dssp             EE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSE
T ss_pred             ec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceE
Confidence            32 2356789999999988877644                                         23333334444444


Q ss_pred             eEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecCCCc
Q psy8758         154 DIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASE  194 (198)
Q Consensus       154 ~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~~~~  194 (198)
                      ..+..+  .....+.++|||++++ ++..+++|.+||+.+.+
T Consensus       252 ~~IPvg--ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~  291 (441)
T d1qnia2         252 RYIPVP--KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLD  291 (441)
T ss_dssp             EEECCB--SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHH
T ss_pred             EEEeCC--CCccCceECCCCCEEEEeCCcCCcEEEEEeehhh
Confidence            444222  3456789999999765 56789999999987643

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.30  E-value=1.7e-09  Score=76.68  Aligned_cols=173  Identities=5%  Similarity=0.056  Sum_probs=106.7

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe--cCCccEEEEeccCCCCc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA--NEDFNLYSYDIRQLNSP   81 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~d~~i~~~d~~~~~~~   81 (198)
                      +.-|+|+|+++.|++... +.+..|.+....................+.++++++.++++.  ...+.+..+.+...   
T Consensus        42 ~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~---  117 (365)
T d1jofa_          42 ISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF---  117 (365)
T ss_dssp             CSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS---
T ss_pred             CCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC---
Confidence            456999999999988765 568888776443333333333344567889999998655433  23456665554321   


Q ss_pred             cccccCceEEEecCCCcEEEEEccCCCcc---eee-ecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCCCc-eeeE
Q psy8758          82 LNVHKDMTSAAANEDFNLYSYDIRQLNSP---LNV-HKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGH-SRDI  155 (198)
Q Consensus        82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~-~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~~-~~~~  155 (198)
                                    .+...++.+......   ... -......+.++.|+|||+++++++. ...|.+|+..... ....
T Consensus       118 --------------~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~  183 (365)
T d1jofa_         118 --------------AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELV  183 (365)
T ss_dssp             --------------CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred             --------------CCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeec
Confidence                          122233333221111   111 1122335789999999998887764 4578888876432 2211


Q ss_pred             --E-eccCcccEEEEEEcCCCCEEEE-ecCCCeEEEEecCCCc
Q psy8758         156 --Y-HTKRMQHVTHTVWSLDNKFVIS-ASDEMNLRVWKAHASE  194 (198)
Q Consensus       156 --~-~~~~~~~v~~~~~s~~~~~l~~-~~~dg~v~~w~~~~~~  194 (198)
                        . ........+.++|+|+++++.. ...++.|.+|+++.++
T Consensus       184 ~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~  226 (365)
T d1jofa_         184 GSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT  226 (365)
T ss_dssp             EEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             cceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCC
Confidence              1 1223467899999999998755 4568899999987654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.25  E-value=3.7e-10  Score=81.23  Aligned_cols=184  Identities=8%  Similarity=-0.015  Sum_probs=113.9

Q ss_pred             ceeEEEECCCCc--eEEEeeCCC-----------------eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEE
Q psy8758           3 HVTHTVWSLDNK--FVISASDEM-----------------NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTA   63 (198)
Q Consensus         3 ~v~~~~~s~~~~--~l~~~~~d~-----------------~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~   63 (198)
                      ....++|+|+|+  +++..+.+.                 .+..+|..+.+....+..   ......+.|+|++++++++
T Consensus       117 gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v---~~~p~~v~~spdGk~a~vt  193 (441)
T d1qnia2         117 AIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV---DGNLDNTDADYTGKYATST  193 (441)
T ss_dssp             CEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEE---SSCCCCEEECSSSSEEEEE
T ss_pred             CccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEec---CCCccceEECCCCCEEEEE
Confidence            467899999998  444444332                 123466666554444432   4567889999999999987


Q ss_pred             ecCCccEEEEeccCCCCc-----------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCE
Q psy8758          64 ANEDFNLYSYDIRQLNSP-----------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE  132 (198)
Q Consensus        64 ~~~d~~i~~~d~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  132 (198)
                      +.....+..++..+....           ....++......+.++.+.+++... ...+..+...+. ...+.++|||++
T Consensus       194 ~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~-~~v~~~IPvgks-PhGv~vSPDGky  271 (441)
T d1qnia2         194 CYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGE-SEFTRYIPVPKN-PHGLNTSPDGKY  271 (441)
T ss_dssp             ESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSS-CSSEEEECCBSS-CCCEEECTTSCE
T ss_pred             ecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccC-CceEEEEeCCCC-ccCceECCCCCE
Confidence            644433333333222110           0000111122334466677776665 466666765544 578999999998


Q ss_pred             EE-EeecCCcEEEEEcCCCcee--------eEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         133 FV-AGGYDKSLRLYLAHQGHSR--------DIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       133 l~-~~~~d~~v~v~d~~~~~~~--------~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ++ ++..+++|.+||+.+....        ..+  .....-.....+|+++|..+.+...|..|..|++.
T Consensus       272 l~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~  341 (441)
T d1qnia2         272 FIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA  341 (441)
T ss_dssp             EEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred             EEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccc
Confidence            75 5567999999998752211        111  11111235667899999988888999999999974

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.24  E-value=1.3e-10  Score=82.34  Aligned_cols=60  Identities=10%  Similarity=0.055  Sum_probs=46.4

Q ss_pred             cEEEEEccCCCcceeeecCCCcceEEEEEccCCCE--EEEeecCCcEEEEEcCCCceeeEEecc
Q psy8758          98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE--FVAGGYDKSLRLYLAHQGHSRDIYHTK  159 (198)
Q Consensus        98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~--l~~~~~d~~v~v~d~~~~~~~~~~~~~  159 (198)
                      .+++||..+ ++.+..+. +...+..++|+|||+.  ++++..++.|++||..+++.+..+..+
T Consensus       295 ~v~v~D~~t-~~~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g  356 (368)
T d1mdah_         295 NTSSVTASV-GQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD  356 (368)
T ss_dssp             EEEEEESSS-CCEEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred             eEEEEECCC-CcEeEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECC
Confidence            478899987 56666654 3456889999999973  456677899999999999988877433

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.17  E-value=7.2e-08  Score=66.87  Aligned_cols=190  Identities=7%  Similarity=0.012  Sum_probs=111.1

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec-C--CccEEEEeccCCCC
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN-E--DFNLYSYDIRQLNS   80 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~--d~~i~~~d~~~~~~   80 (198)
                      +..++|.++|++.++-...+.|..|+.++++....+..  .......++++++++.+++... .  .+.+...+......
T Consensus        42 lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~--~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~  119 (319)
T d2dg1a1          42 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS--HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL  119 (319)
T ss_dssp             EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC--SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred             cEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeC--CCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCcee
Confidence            35789999999777666788888888766553333322  2445689999999987765321 1  22344444433221


Q ss_pred             c--cc---cccCceEEEecCCCcEEEEEcc--------------CCCcceeeecCCCcceEEEEEccCCCEE-EEeecCC
Q psy8758          81 P--LN---VHKDMTSAAANEDFNLYSYDIR--------------QLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDK  140 (198)
Q Consensus        81 ~--~~---~~~~~~~~~~~~~~~i~~~d~~--------------~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~d~  140 (198)
                      .  ..   ......-+....+|.+++=|..              ..+..+..+...-...+.++|+|+++.| ++-+..+
T Consensus       120 ~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~  199 (319)
T d2dg1a1         120 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTAN  199 (319)
T ss_dssp             EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred             eeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCC
Confidence            1  00   0011112333445544443322              1122222222222345779999999866 4556678


Q ss_pred             cEEEEEcCCCc-eeeEE------eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGH-SRDIY------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~-~~~~~------~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .|..|++.... .....      ..........|++.++|++.++....+.|.+++. +|+.+
T Consensus       200 ~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l  261 (319)
T d2dg1a1         200 RLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPI  261 (319)
T ss_dssp             EEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEE
T ss_pred             ceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEE
Confidence            99999986431 11111      1111234678999999998888888899999996 56654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.17  E-value=2e-08  Score=69.13  Aligned_cols=177  Identities=10%  Similarity=0.066  Sum_probs=112.3

Q ss_pred             cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758           2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS   80 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~   80 (198)
                      +.+.+++|+++|+++++...++.+..++..... ....+...........+.+.++++.+++ .+.++.++.++......
T Consensus        68 ~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~-~~~~~~i~~~~~~~~~~  146 (302)
T d2p4oa1          68 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTA-DSYRGAIWLIDVVQPSG  146 (302)
T ss_dssp             SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEE-ETTTTEEEEEETTTTEE
T ss_pred             CCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEee-ccccccceeeeccCCcc
Confidence            357889999999988888777788887765432 2223322223455788999999876654 45677787777654321


Q ss_pred             c----------------------cccccCceEEEecCCCcEEEEEccCCCccee-eecCCCcceEEEEEccCCCEEEEee
Q psy8758          81 P----------------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGG  137 (198)
Q Consensus        81 ~----------------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~  137 (198)
                      .                      +....+.++++.+..+.|+.++......... ...........++++++|+++++..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~  226 (302)
T d2p4oa1         147 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATH  226 (302)
T ss_dssp             EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECB
T ss_pred             eeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEc
Confidence            1                      0111234567777888888888765322111 1111233456799999999888888


Q ss_pred             cCCcEEEEEcCCCceeeEE-eccCcccEEEEEE---cCCCCEEEEec
Q psy8758         138 YDKSLRLYLAHQGHSRDIY-HTKRMQHVTHTVW---SLDNKFVISAS  180 (198)
Q Consensus       138 ~d~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~---s~~~~~l~~~~  180 (198)
                      .++.|..++.... ..... ....-...++++|   ++|++.|+.++
T Consensus       227 ~~~~V~~i~p~G~-~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt  272 (302)
T d2p4oa1         227 IYNSVVRIAPDRS-TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT  272 (302)
T ss_dssp             TTCCEEEECTTCC-EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred             CCCcEEEECCCCC-EEEEEecCCCCCCceEEEEcCCCCCCCEEEEEC
Confidence            8899999987543 32222 1222346889999   67888776543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.16  E-value=2.8e-08  Score=67.59  Aligned_cols=158  Identities=11%  Similarity=0.129  Sum_probs=94.0

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV   84 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~   84 (198)
                      ..+++.++|+++++....+.+.+++. +++.+..+....+......+++.+++..++ +....+.|+++|..        
T Consensus       117 ~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v-~d~~~~~V~~~d~~--------  186 (279)
T d1q7fa_         117 RGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFI-SDNRAHCVKVFNYE--------  186 (279)
T ss_dssp             EEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEE-EEGGGTEEEEEETT--------
T ss_pred             ceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEe-eeccccceeeeecC--------
Confidence            45566666665555555555555554 233333332222223345556666554333 23344555555533        


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCCCceeeEEec-cC
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGHSRDIYHT-KR  160 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~~~~~~~~~-~~  160 (198)
                                             ++.+..+.  +.......|++.|+|+.+++-.. +..|.+|+. +++.+..+.. ..
T Consensus       187 -----------------------G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~  242 (279)
T d1q7fa_         187 -----------------------GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVK  242 (279)
T ss_dssp             -----------------------CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSC
T ss_pred             -----------------------CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCC
Confidence                                   23333331  23445788999999997777544 456999984 5766655522 22


Q ss_pred             cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758         161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE  197 (198)
Q Consensus       161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~  197 (198)
                      ......+++.|+|+++++ +.++.|++|+..+..+++
T Consensus       243 ~~~p~~vav~~dG~l~V~-~~n~~v~~fr~~~~~~~~  278 (279)
T d1q7fa_         243 HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPVG  278 (279)
T ss_dssp             CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCTT
T ss_pred             CCCEeEEEEeCCCcEEEE-eCCCeEEEEEeeeecCCC
Confidence            346789999999986654 568999999999887664

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.2e-09  Score=78.42  Aligned_cols=73  Identities=11%  Similarity=0.081  Sum_probs=51.4

Q ss_pred             ceeEEEECCCCceEEEee---------CCCeEEEEEccCCceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           3 HVTHTVWSLDNKFVISAS---------DEMNLRVWKAHASEKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~---------~d~~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      .+....||||+++++...         ..+.+.++|+.+++. ..+... .....+....|||+|+.++.+  .++.+++
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~-~~l~~~~~~~~~l~~~~wSPDG~~iafv--~~~nl~~  138 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFI--FENNIYY  138 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEE--ETTEEEE
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCce-eeccCccCCccccceeeeccCCceEEEE--ecceEEE
Confidence            355678999999887763         356788999987763 333221 123445678999999999886  4678888


Q ss_pred             EeccCC
Q psy8758          73 YDIRQL   78 (198)
Q Consensus        73 ~d~~~~   78 (198)
                      .+....
T Consensus       139 ~~~~~~  144 (465)
T d1xfda1         139 CAHVGK  144 (465)
T ss_dssp             ESSSSS
T ss_pred             EecCCC
Confidence            887653

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.13  E-value=2.6e-08  Score=67.07  Aligned_cols=182  Identities=5%  Similarity=-0.048  Sum_probs=113.2

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      ...++++++|+++++....+.+++++-.+...   +...........+++.+++..+++ ...+..+..++.........
T Consensus        59 p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~---~~~~~~~~~p~~iavd~~g~i~v~-d~~~~~~~~~~~~~~~~~~~  134 (260)
T d1rwia_          59 PQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT---VLPFDGLNYPEGLAVDTQGAVYVA-DRGNNRVVKLAAGSKTQTVL  134 (260)
T ss_dssp             CCCEEECTTCCEEEEETTTEEEEECTTCSCCE---ECCCCSCCSEEEEEECTTCCEEEE-EGGGTEEEEECTTCSSCEEC
T ss_pred             ceEEEEcCCCCEEEeeeeeceeeeeeecccee---eeeeeeeeecccccccccceeEee-ccccccccccccccceeeee
Confidence            46789999998777766666666555433332   222222345678999998876554 34555666666543221110


Q ss_pred             -------------cccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758          84 -------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus        84 -------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                                   ...+.++++...++.|..++...  .....+ .........+++.++|+++++....+.|..++...
T Consensus       135 ~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~--~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~  212 (260)
T d1rwia_         135 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES--NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS  212 (260)
T ss_dssp             CCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTT--CCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTC
T ss_pred             eecccCCcceeeecCCCCEeeecccccccccccccc--ceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCC
Confidence                         01223455666667777787764  222222 23345578899999999888888888888887665


Q ss_pred             CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      ..... .....-.....|+++++|.++++-..++.|+.++...
T Consensus       213 ~~~~~-~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~~~  254 (260)
T d1rwia_         213 TTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE  254 (260)
T ss_dssp             SCCEE-CCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred             CeEEE-EccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEeCCC
Confidence            43222 2122234678999999999888777778777665543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.08  E-value=1.3e-07  Score=65.44  Aligned_cols=186  Identities=11%  Similarity=0.106  Sum_probs=116.7

Q ss_pred             eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeec---CceeeEEeCCCCCeEEEEec--------------CC
Q psy8758           5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMS---LRSNMVSWNPMEAFVFTAAN--------------ED   67 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~--------------~d   67 (198)
                      ..++|.++++.++++...+.+...+.+.+.. ..+......   ...+.+++.|+|...++...              ..
T Consensus        74 ~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~-~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~  152 (314)
T d1pjxa_          74 AGCQCDRDANQLFVADMRLGLLVVQTDGTFE-EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKF  152 (314)
T ss_dssp             EEEEECSSSSEEEEEETTTEEEEEETTSCEE-ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSC
T ss_pred             eeEEEeCCCCEEEEEECCCeEEEEeCCCcEE-EEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCC
Confidence            4689999998888877777788888765432 222111111   12467899999987765311              12


Q ss_pred             ccEEEEeccCCCCc------------cccccC----ceEEEecCCCcEEEEEccCCCcce-----eeecC-CCcceEEEE
Q psy8758          68 FNLYSYDIRQLNSP------------LNVHKD----MTSAAANEDFNLYSYDIRQLNSPL-----NVHKD-MTSAVTSVD  125 (198)
Q Consensus        68 ~~i~~~d~~~~~~~------------~~~~~~----~~~~~~~~~~~i~~~d~~~~~~~~-----~~~~~-~~~~i~~~~  125 (198)
                      +.++.++.......            +....+    .++++-+..+.|+.||+...+...     ..+.. .......|+
T Consensus       153 G~v~~~~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGia  232 (314)
T d1pjxa_         153 GSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD  232 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred             ceEEEEeecCceeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeE
Confidence            33444443221111            111111    245556777888888876533221     11111 223456899


Q ss_pred             EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCC
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA  192 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~  192 (198)
                      +.++|++.++....+.|.+||...++....+.. ......+++|.||++ ++++.+.+|.|...++..
T Consensus       233 vD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~-p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EecCCcEEEEEcCCCEEEEEeCCCCEEEEEEEC-CCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            999999888887889999999988876665533 335788999999997 456677889998888753

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.07  E-value=8.5e-08  Score=64.51  Aligned_cols=185  Identities=5%  Similarity=-0.072  Sum_probs=109.4

Q ss_pred             eEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758           5 THTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN   83 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~   83 (198)
                      .+++++++|+..++. +..+.+..++.....  ..............+++++++..+ ++....+.+++++.........
T Consensus        17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~p~gvav~~~g~i~-v~d~~~~~i~~~~~~~~~~~~~   93 (260)
T d1rwia_          17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTG--TTVLPFNGLYQPQGLAVDGAGTVY-VTDFNNRVVTLAAGSNNQTVLP   93 (260)
T ss_dssp             EEEEECTTCCEEEEECSSSCEEEEEC----C--EEECCCCSCCSCCCEEECTTCCEE-EEETTTEEEEECTTCSCCEECC
T ss_pred             CEEEEcCCCCEEEEEcCCCCEEEEEcCCCce--EEEeccCCccCceEEEEcCCCCEE-Eeeeeeceeeeeeeccceeeee
Confidence            688999999966554 455777776654332  222221112345789999988754 4455556666665443322211


Q ss_pred             --cccCceEEEecCCCcEEEEEccCC--------Ccceeeec-CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758          84 --VHKDMTSAAANEDFNLYSYDIRQL--------NSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS  152 (198)
Q Consensus        84 --~~~~~~~~~~~~~~~i~~~d~~~~--------~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~  152 (198)
                        ....+.-++...++.+++-|....        ........ ........++++|+++.+++...++.|..++......
T Consensus        94 ~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~  173 (260)
T d1rwia_          94 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ  173 (260)
T ss_dssp             CCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred             eeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeecccccccccccccccee
Confidence              112223333444555555553321        11111111 1223457899999999888888888999999876544


Q ss_pred             eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .... .........+++.++|+++++....+.|..++....
T Consensus       174 ~~~~-~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~  213 (260)
T d1rwia_         174 VVLP-FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST  213 (260)
T ss_dssp             EECC-CSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCS
T ss_pred             eeee-ccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCC
Confidence            3322 234456789999999998888888888888876543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.04  E-value=6.4e-08  Score=66.55  Aligned_cols=183  Identities=5%  Similarity=-0.023  Sum_probs=113.0

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc-
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL-   82 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~-   82 (198)
                      +..++++|||+++++...+++|..++.. ++ ...+.  .....+.+++|+|+++.+++ ...++.+..++........ 
T Consensus        30 ~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~--~~~~~~~gla~~~dG~l~v~-~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          30 LENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHA--TVEGKVSGLAFTSNGDLVAT-GWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             EEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEE--ECSSEEEEEEECTTSCEEEE-EECTTSCEEEEEECTTSCEE
T ss_pred             cCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEE--cCCCCcceEEEcCCCCeEEE-ecCCceEEEEEeccccccee
Confidence            5678999999999988889988888754 33 22222  23567899999999986665 4566777777654322111 


Q ss_pred             ---------------ccccCceEEEecCCCcEEEEEccCCCcceeee---------cCCCcceEEEEEccCCCEEEEeec
Q psy8758          83 ---------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH---------KDMTSAVTSVDYSPTGREFVAGGY  138 (198)
Q Consensus        83 ---------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~sp~~~~l~~~~~  138 (198)
                                     ....+.++++...++.+..++.......+...         .........++++. +..+++.+.
T Consensus       105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~  183 (302)
T d2p4oa1         105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTE  183 (302)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETT
T ss_pred             eccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCC
Confidence                           11223455566667777777766421111111         11122345566643 334555667


Q ss_pred             CCcEEEEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758         139 DKSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA  192 (198)
Q Consensus       139 d~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~  192 (198)
                      .+.|..++.......... ..........++++++|+++++...++.|..++...
T Consensus       184 ~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G  238 (302)
T d2p4oa1         184 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR  238 (302)
T ss_dssp             TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred             CCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCC
Confidence            888888888764322111 011123456799999999888877888899887754

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=1.5e-09  Score=79.32  Aligned_cols=150  Identities=14%  Similarity=0.185  Sum_probs=94.2

Q ss_pred             EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc
Q psy8758           7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH   85 (198)
Q Consensus         7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~   85 (198)
                      ..|.+++.++.. ..+|.+.+||+.+++....+.... ....+....|+||+++++......   ++|..          
T Consensus        22 ~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~---~~~r~----------   87 (465)
T d1xfda1          22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVE---PIYQH----------   87 (465)
T ss_dssp             CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCC---CCSSS----------
T ss_pred             CEEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEccc---ceeEe----------
Confidence            468888876654 467889999998876432222211 223466778999999987753211   12221          


Q ss_pred             cCceEEEecCCCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCccc
Q psy8758          86 KDMTSAAANEDFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH  163 (198)
Q Consensus        86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~  163 (198)
                              +..+.+.++|+.+ +....  ........+....|||||+.+|... ++.|.+.+...+........+....
T Consensus        88 --------s~~~~~~i~d~~~-~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~  157 (465)
T d1xfda1          88 --------SYTGYYVLSKIPH-GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGV  157 (465)
T ss_dssp             --------CCCSEEEEEESSS-CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTT
T ss_pred             --------eccccEEEEEccC-CceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcce
Confidence                    1235566677665 33222  1222344566789999999998875 6778888888776665543332221


Q ss_pred             -----------------EEEEEEcCCCCEEEEec
Q psy8758         164 -----------------VTHTVWSLDNKFVISAS  180 (198)
Q Consensus       164 -----------------v~~~~~s~~~~~l~~~~  180 (198)
                                       -.++-|||||++||...
T Consensus       158 i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~  191 (465)
T d1xfda1         158 IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA  191 (465)
T ss_dssp             EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred             eeccccchhhhhhhccccceEEECCCCCeEEEEE
Confidence                             24677999999998764

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.98  E-value=3.8e-07  Score=61.85  Aligned_cols=187  Identities=8%  Similarity=0.083  Sum_probs=111.1

Q ss_pred             eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee----cCceeeEEeCCCCC-eEEEEecCCccEEEEeccCC
Q psy8758           4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM----SLRSNMVSWNPMEA-FVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~-~~~~~~~~d~~i~~~d~~~~   78 (198)
                      -..++++++|+.+++-.....|++||.+ ++....+.....    ......+++.++.. .+++....++.|..++....
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~  103 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ  103 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccccc
Confidence            4689999999987776677899999964 554444432211    11223455554433 34433334456666664322


Q ss_pred             CC-ccc------------cccCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758          79 NS-PLN------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLR  143 (198)
Q Consensus        79 ~~-~~~------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~  143 (198)
                      .. .+.            ...+.++++....+.+.+++..  ++.+..+  ..+......+++.++++.+++....+.|+
T Consensus       104 ~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~--g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~  181 (279)
T d1q7fa_         104 FVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK  181 (279)
T ss_dssp             EEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             ceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC--CceeecccccccccccceeeeccceeEEeeecccccee
Confidence            11 000            0112233333444445555443  3444443  23455678899999999888888899999


Q ss_pred             EEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecC-CCeEEEEecCCCcc
Q psy8758         144 LYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASD-EMNLRVWKAHASEK  195 (198)
Q Consensus       144 v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~-dg~v~~w~~~~~~~  195 (198)
                      +||.. ++.+..+ ..+.......+++.|+|+.+++-.. ++.|.+|+. +|+.
T Consensus       182 ~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~  233 (279)
T d1q7fa_         182 VFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQL  233 (279)
T ss_dssp             EEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCE
T ss_pred             eeecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCE
Confidence            99975 4444444 2234456889999999997776443 457888884 4553

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.95  E-value=1.3e-06  Score=60.24  Aligned_cols=191  Identities=11%  Similarity=0.048  Sum_probs=110.3

Q ss_pred             eeEEEECCCCceEEEeeC-------CCeEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           4 VTHTVWSLDNKFVISASD-------EMNLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      ...++|.|+|++.++...       ++.|..||..++..........  .......+.|.+++..++++. ....+...+
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad-~~~~i~~~~   98 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQ   98 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEE
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEE-CCCeEEEEe
Confidence            457889999997765322       4678888887765322221111  122356899999999887764 455677777


Q ss_pred             ccCCCCccc-----cc--cCceEEEecCCCcEEEEEcc-----------------------CCCcceeeecCCCcceEEE
Q psy8758          75 IRQLNSPLN-----VH--KDMTSAAANEDFNLYSYDIR-----------------------QLNSPLNVHKDMTSAVTSV  124 (198)
Q Consensus        75 ~~~~~~~~~-----~~--~~~~~~~~~~~~~i~~~d~~-----------------------~~~~~~~~~~~~~~~i~~~  124 (198)
                      .......+.     ..  ....-+....+|.+++=|..                       ..++..... ..-...+.+
T Consensus        99 ~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~-~~~~~pNGi  177 (314)
T d1pjxa_          99 TDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD-TAFQFPNGI  177 (314)
T ss_dssp             TTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE-EEESSEEEE
T ss_pred             CCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEee-CCcceeeee
Confidence            654322111     00  00111233444555443321                       111211111 112234678


Q ss_pred             EEccCCC-----EEEEeecCCcEEEEEcCCCceeeE---E---eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         125 DYSPTGR-----EFVAGGYDKSLRLYLAHQGHSRDI---Y---HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       125 ~~sp~~~-----~l~~~~~d~~v~v~d~~~~~~~~~---~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      +|+|++.     ++++-+..+.|..||+.....+..   +   ...+......+++.++|+++++....+.|.+||.+++
T Consensus       178 ~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g  257 (314)
T d1pjxa_         178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG  257 (314)
T ss_dssp             EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred             EECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCC
Confidence            9999864     445556778899998765432221   1   1112234678999999998887777899999998877


Q ss_pred             ccc
Q psy8758         194 EKL  196 (198)
Q Consensus       194 ~~~  196 (198)
                      +.+
T Consensus       258 ~~~  260 (314)
T d1pjxa_         258 QPK  260 (314)
T ss_dssp             SCS
T ss_pred             EEE
Confidence            643

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.87  E-value=5.6e-07  Score=60.30  Aligned_cols=166  Identities=10%  Similarity=0.043  Sum_probs=94.4

Q ss_pred             cceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEeccCC
Q psy8758           2 QHVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIRQL   78 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~~~   78 (198)
                      +......|+|+|+.++.... ++...++....... ................+++++..++.+...++.  |...+....
T Consensus        83 ~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~  161 (269)
T d2hqsa1          83 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG-QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG  161 (269)
T ss_dssp             SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred             cccccceecCCCCeeeEeeecCCccceeecccccc-cceeeeeccccccccccccccccceecccccCCceEeeeecccc
Confidence            34567889999998876553 33333333322211 111111123334456788888877776655554  555555443


Q ss_pred             CCcc-------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec---CCcE
Q psy8758          79 NSPL-------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSL  142 (198)
Q Consensus        79 ~~~~-------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v  142 (198)
                      ....             ......++......+...+|......... .............|||||+.|+..+.   ...+
T Consensus       162 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l  240 (269)
T d2hqsa1         162 APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVL  240 (269)
T ss_dssp             CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEE
T ss_pred             cceeeecccccccccccccccceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEcCCCCcEE
Confidence            3211             11122234444455555555544322333 33344556678899999998876554   3478


Q ss_pred             EEEEcCCCceeeEEeccCcccEEEEEEcC
Q psy8758         143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSL  171 (198)
Q Consensus       143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~  171 (198)
                      +++++..+......  ...+.+...+|||
T Consensus       241 ~~~~~dg~~~~~lt--~~~g~~~~p~WSP  267 (269)
T d2hqsa1         241 NLVSTDGRFKARLP--ATDGQVKFPAWSP  267 (269)
T ss_dssp             EEEETTSCCEEECC--CSSSEEEEEEECC
T ss_pred             EEEECCCCCEEEEe--CCCCcEEeEEeCC
Confidence            99999887765543  4456788899998

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.78  E-value=1.4e-06  Score=58.53  Aligned_cols=67  Identities=13%  Similarity=0.031  Sum_probs=46.0

Q ss_pred             EEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-----cEEEEeccC
Q psy8758           7 TVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-----NLYSYDIRQ   77 (198)
Q Consensus         7 ~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-----~i~~~d~~~   77 (198)
                      +..||+  |+.++-.+ ++.|.+.|+.+++. +.+..  .........|||||+.|+.+...++     .|++++...
T Consensus         4 ~~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~--~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~   77 (281)
T d1k32a2           4 LLLNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVS--NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN   77 (281)
T ss_dssp             CCEEEEEETTEEEEEE-TTEEEEEETTTCCE-EEEEC--SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred             cccCCCCCCCEEEEEe-CCcEEEEECCCCCE-EEEec--CCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecC
Confidence            346888  99887664 56788889987763 34432  3456788999999999987653332     366666543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.66  E-value=1.4e-05  Score=55.09  Aligned_cols=150  Identities=10%  Similarity=0.055  Sum_probs=91.8

Q ss_pred             eeEEEECCCCceEEEeeC------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           4 VTHTVWSLDNKFVISASD------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~~------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      .+.+++.++|++.++-..      .+.+..++... +....+..  .-...+.++|+|+++.++++-+..+.|+.+++..
T Consensus       132 ~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg-~~~~~~~~--~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~  208 (319)
T d2dg1a1         132 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF-RTVTPIIQ--NISVANGIALSTDEKVLWVTETTANRLHRIALED  208 (319)
T ss_dssp             EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-CCEEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             CcceeEEeccceeecccccccccCcceeEEEeccc-ceeEEEee--ccceeeeeeeccccceEEEecccCCceEEEEEcC
Confidence            567889999986665321      12344444332 22233222  1233578999999998888766778888888764


Q ss_pred             CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758          78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH  157 (198)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~  157 (198)
                      .....                 ...     ................|++.++|++.++....+.|.+||. .++.+..+.
T Consensus       209 ~g~~~-----------------~~~-----~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~  265 (319)
T d2dg1a1         209 DGVTI-----------------QPF-----GATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQIL  265 (319)
T ss_dssp             TSSSE-----------------EEE-----EEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred             CCcee-----------------ccc-----cceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEe
Confidence            31100                 000     0000111111223567999999998888888999999995 677766663


Q ss_pred             c-----cCcccEEEEEEcCCCCEEEEe
Q psy8758         158 T-----KRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       158 ~-----~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      .     ++...+.+++|.|++..+++.
T Consensus       266 ~P~~~~~~~~~~~~~~~~~~~~~~~~t  292 (319)
T d2dg1a1         266 IPGRDEGHMLRSTHPQFIPGTNQLIIC  292 (319)
T ss_dssp             CTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred             CCCcCCCcCceeeeEEEeCCCCEEEEE
Confidence            2     233467899999987766544

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.46  E-value=1.5e-06  Score=58.30  Aligned_cols=95  Identities=16%  Similarity=0.215  Sum_probs=64.8

Q ss_pred             EeCCC--CCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC
Q psy8758          52 SWNPM--EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT  129 (198)
Q Consensus        52 ~~~~~--~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~  129 (198)
                      ..+|+  |+.++.+.  ++.|++.|+..                               ...+.+..+.......+||||
T Consensus         5 ~~sPdi~G~~v~f~~--~~dl~~~d~~~-------------------------------g~~~~Lt~~~~~~~~p~~SPD   51 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC--CDDLWEHDLKS-------------------------------GSTRKIVSNLGVINNARFFPD   51 (281)
T ss_dssp             CEEEEEETTEEEEEE--TTEEEEEETTT-------------------------------CCEEEEECSSSEEEEEEECTT
T ss_pred             ccCCCCCCCEEEEEe--CCcEEEEECCC-------------------------------CCEEEEecCCCcccCEEECCC
Confidence            45788  88887763  45677777664                               234556667777889999999


Q ss_pred             CCEEEEeec-C-----CcEEEEEcCCCceeeEEec-----cCcccEEEEEEcCCCCEEEEe
Q psy8758         130 GREFVAGGY-D-----KSLRLYLAHQGHSRDIYHT-----KRMQHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       130 ~~~l~~~~~-d-----~~v~v~d~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~  179 (198)
                      |+.||.... +     ..|.+++...++.......     ..........|+|+|+.|+..
T Consensus        52 G~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          52 GRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             SSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             CCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence            998886532 2     2477888888776554211     122345778999999988764

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.38  E-value=9.3e-05  Score=50.27  Aligned_cols=162  Identities=14%  Similarity=0.029  Sum_probs=96.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee---ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV---MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN   79 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~   79 (198)
                      .+.++++.++|+++++ +.+ .+.++|..+++.. .+....   ....++.+.+.|+|...+.+.....           
T Consensus        60 ~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~-~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~-----------  125 (295)
T d2ghsa1          60 MGSALAKISDSKQLIA-SDD-GLFLRDTATGVLT-LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA-----------  125 (295)
T ss_dssp             CEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEE-EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC-----------
T ss_pred             CcEEEEEecCCCEEEE-EeC-ccEEeecccceee-EEeeeecCCCcccceeeEECCCCCEEEEeccccc-----------
Confidence            4678888888877765 344 5888998877632 222211   1224577788888876665421110           


Q ss_pred             CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-EeecCCcEEEEEcCCCc------e
Q psy8758          80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGH------S  152 (198)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~~~d~~v~v~d~~~~~------~  152 (198)
                                     ..+.-.+|.+.. ++...... .-...+.++|+|+++.+. +-+..+.|..|++....      .
T Consensus       126 ---------------~~~~g~l~~~~~-g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~  188 (295)
T d2ghsa1         126 ---------------ETGAGSIYHVAK-GKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA  188 (295)
T ss_dssp             ---------------CTTCEEEEEEET-TEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC
T ss_pred             ---------------cccceeEeeecC-CcEEEEee-ccCCcceeeecCCCceEEEeecccceeeEeeecccccccccce
Confidence                           011222333332 23222222 233457899999998665 44567889999875321      1


Q ss_pred             -eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         153 -RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       153 -~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                       ......+..+....+++..+|++.++.-..+.|..||. +|+.+
T Consensus       189 ~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~  232 (295)
T d2ghsa1         189 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHI  232 (295)
T ss_dssp             EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEE
T ss_pred             EEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEe
Confidence             11112233456788999999998877667788999995 45544

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.30  E-value=0.00014  Score=49.29  Aligned_cols=148  Identities=7%  Similarity=0.022  Sum_probs=94.6

Q ss_pred             ceeEEEECCCCceEEEeeC----CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758           3 HVTHTVWSLDNKFVISASD----EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~----d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      .++++.+.|+|++.++...    .+.-.+|.+..++.......   -...+.++|+++++.++.+.+..+.|+.+++...
T Consensus       104 ~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~---~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~  180 (295)
T d2ghsa1         104 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD---ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR  180 (295)
T ss_dssp             EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE---ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred             cceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec---cCCcceeeecCCCceEEEeecccceeeEeeeccc
Confidence            3678889999986665432    23456777766653333322   2345789999999988887777888888876432


Q ss_pred             CCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEec
Q psy8758          79 NSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT  158 (198)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~  158 (198)
                      .......                      ................+++.++|++.++.-..+.|..||. .++.+..+..
T Consensus       181 ~~~~~~~----------------------~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~l  237 (295)
T d2ghsa1         181 TGLPTGK----------------------AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV  237 (295)
T ss_dssp             TCCBSSC----------------------CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred             ccccccc----------------------eEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecC
Confidence            1110000                      0111122233455788999999998888777889999995 6777776643


Q ss_pred             cCcccEEEEEEc-CCCCEEE
Q psy8758         159 KRMQHVTHTVWS-LDNKFVI  177 (198)
Q Consensus       159 ~~~~~v~~~~~s-~~~~~l~  177 (198)
                      . ...+++++|- ||.+.|+
T Consensus       238 P-~~~~T~~~FGG~d~~~Ly  256 (295)
T d2ghsa1         238 P-GKQTTCPAFIGPDASRLL  256 (295)
T ss_dssp             S-CSBEEEEEEESTTSCEEE
T ss_pred             C-CCceEEEEEeCCCCCEEE
Confidence            3 2568999996 5766443

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.02  E-value=0.00073  Score=46.71  Aligned_cols=169  Identities=12%  Similarity=0.095  Sum_probs=95.3

Q ss_pred             eEEEECCCCceEEEeeC------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758           5 THTVWSLDNKFVISASD------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS   72 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~   72 (198)
                      -+++..|+|..+++++.            .|.+.++|+.+.+........ .........|.|.|-.+..  ..|+.+++
T Consensus        38 EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~-~~~~~~~~~f~PhGi~l~~--~~dg~~~L  114 (340)
T d1v04a_          38 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEI-IGNTLDISSFNPHGISTFI--DDDNTVYL  114 (340)
T ss_dssp             CEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEE-ECSSSCGGGCCEEEEEEEE--CTTCCEEE
T ss_pred             ceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEe-cCCCCCCcceeccceeEEE--cCCCcEEE
Confidence            45788899987766532            388999998765422221111 1122233446666544433  24555555


Q ss_pred             EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeee---c-CCCcceEEEEEccCCCEEEEeec----------
Q psy8758          73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH---K-DMTSAVTSVDYSPTGREFVAGGY----------  138 (198)
Q Consensus        73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~-~~~~~i~~~~~sp~~~~l~~~~~----------  138 (198)
                      +=+...               ....+|.++++......+...   . ......++++...++.+++|-..          
T Consensus       115 ~vvnH~---------------~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~  179 (340)
T d1v04a_         115 LVVNHP---------------GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSW  179 (340)
T ss_dssp             EEEECS---------------TTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHH
T ss_pred             EEEecc---------------CCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhh
Confidence            443221               133456666665422222211   1 12244789999999988888421          


Q ss_pred             -----CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCC
Q psy8758         139 -----DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS  193 (198)
Q Consensus       139 -----d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~  193 (198)
                           -+...+|..+.++.....  ..-...+.++++||+++|+.+ +..+.|+.|+++..
T Consensus       180 e~~~~~~~g~v~~~~~~~~~~~~--~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~  238 (340)
T d1v04a_         180 EMHLGLAWSFVTYYSPNDVRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN  238 (340)
T ss_dssp             HHHTTCCCEEEEEECSSCEEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             hHhhcCCceeEEEEcCCceEEEc--CCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence                 123444544444443332  222578999999999876654 56788999998754

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.95  E-value=0.0012  Score=46.65  Aligned_cols=157  Identities=10%  Similarity=0.053  Sum_probs=90.2

Q ss_pred             EEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-c-------------EEEEeccCCCCccccccCceE
Q psy8758          25 LRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-N-------------LYSYDIRQLNSPLNVHKDMTS   90 (198)
Q Consensus        25 i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~-------------i~~~d~~~~~~~~~~~~~~~~   90 (198)
                      +.+.|.++.+....+..   ......+.++|+|+++++++.... .             +.+++.......... .....
T Consensus       175 ~t~ID~~tm~V~~QV~V---~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~-Gk~~e  250 (459)
T d1fwxa2         175 FTAVDADKWEVAWQVLV---SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA-GDYQE  250 (459)
T ss_dssp             EEEEETTTTEEEEEEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH-TCSEE
T ss_pred             EEEEecCCceEEEEeee---CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhc-CCcEE
Confidence            45677776654444432   445678999999999998753221 1             222222111000000 00001


Q ss_pred             EEecCCCcEEEEEccCC--CcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEEEEcCCCce--------eeE--Ee
Q psy8758          91 AAANEDFNLYSYDIRQL--NSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHS--------RDI--YH  157 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~~--------~~~--~~  157 (198)
                           -+.+.+.|.+..  ...++.+.. ......+..+|||+++++++ .+.++.|+|++.-..        ...  ..
T Consensus       251 -----ingV~VVD~~~~~~~~v~~yIPV-pKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e  324 (459)
T d1fwxa2         251 -----LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE  324 (459)
T ss_dssp             -----ETTEEEEECSGG--CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC
T ss_pred             -----eCCceeecccccCCcceeEEEec-CCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEee
Confidence                 133566776641  123333332 23356789999999887766 488999999974211        111  11


Q ss_pred             ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758         158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH  191 (198)
Q Consensus       158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~  191 (198)
                      ....-....-+|+..|.-..+.--|..|.-|++.
T Consensus       325 ~elglgPLht~fd~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         325 PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred             cccCcCccccccCCCceEEEEeeccceEEEEecc
Confidence            1223456777899888766666789999999985

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.92  E-value=4.3e-05  Score=54.04  Aligned_cols=85  Identities=9%  Similarity=0.120  Sum_probs=53.7

Q ss_pred             CceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEE
Q psy8758          46 LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD  125 (198)
Q Consensus        46 ~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~  125 (198)
                      .....+.++|||+++++++..+.++.++|++.....+....                |.+   ..+..-....-...--+
T Consensus       275 KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~----------------~~~---~~~~~e~elglgPLht~  335 (459)
T d1fwxa2         275 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA----------------DPR---SAVVAEPELGLGPLHTA  335 (459)
T ss_dssp             SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-----------------GG---GGEEECCBCCSCEEEEE
T ss_pred             CCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccC----------------Ccc---ccEEeecccCcCccccc
Confidence            44578899999999999998899999999875432221100                111   11111111222334567


Q ss_pred             EccCCCEEEEeecCCcEEEEEcCC
Q psy8758         126 YSPTGREFVAGGYDKSLRLYLAHQ  149 (198)
Q Consensus       126 ~sp~~~~l~~~~~d~~v~v~d~~~  149 (198)
                      |+..|.-..+---|..|.-|++..
T Consensus       336 fd~~g~aytslfids~v~kw~~~~  359 (459)
T d1fwxa2         336 FDGRGNAYTSLFLDSQVVKWNIED  359 (459)
T ss_dssp             ECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             cCCCceEEEEeeccceEEEEecch
Confidence            888775555556799999999853

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.63  E-value=0.0028  Score=44.08  Aligned_cols=159  Identities=11%  Similarity=0.061  Sum_probs=86.2

Q ss_pred             EEEECCCCceEEEeeCC-----C------eEEEEEccCCceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758           6 HTVWSLDNKFVISASDE-----M------NLRVWKAHASEKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSY   73 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d-----~------~i~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~   73 (198)
                      ......+|+.++.|+.+     +      .+.+||..+++-....... .+.......++.+++..++..+.....+.+|
T Consensus        24 ~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~y  103 (387)
T d1k3ia3          24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY  103 (387)
T ss_dssp             EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred             EEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEe
Confidence            34455688888877642     1      3678999877543221111 1222234567888887776544344567777


Q ss_pred             eccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC------CcEEEEEc
Q psy8758          74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD------KSLRLYLA  147 (198)
Q Consensus        74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d------~~v~v~d~  147 (198)
                      |..+..                      |.      ...... ....-...+..+||+.++.++.+      ..+.+||.
T Consensus       104 d~~~~~----------------------w~------~~~~~~-~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~  154 (387)
T d1k3ia3         104 DSSSDS----------------------WI------PGPDMQ-VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP  154 (387)
T ss_dssp             EGGGTE----------------------EE------ECCCCS-SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred             cCccCc----------------------cc------cccccc-ccccccceeeecCCceeeeccccccccccceeeeecC
Confidence            765431                      11      011111 11223456777899999988753      46899999


Q ss_pred             CCCceeeEEe--------ccCc-----ccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758         148 HQGHSRDIYH--------TKRM-----QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS  193 (198)
Q Consensus       148 ~~~~~~~~~~--------~~~~-----~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~  193 (198)
                      .+.+....-.        ..+.     ..-..+.--++|+.+..+..++.+.+++..+.
T Consensus       155 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~  213 (387)
T d1k3ia3         155 SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSG  213 (387)
T ss_dssp             TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTC
T ss_pred             CCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccC
Confidence            8865433210        0000     00111223456777777766777777776554

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.60  E-value=0.0051  Score=45.48  Aligned_cols=55  Identities=13%  Similarity=0.058  Sum_probs=36.3

Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |.+.-+|+.+++.+.......  +..+-..+-.+.++++++.||.++-+|.++||.|
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~--~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~l  498 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL  498 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccEEEeccCCCceeeEcCCCC--CCCcceeEecCCEEEEECCCCeEEEEECCCCcEE
Confidence            356677777877766653321  1111112224557778999999999999999986

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=0.004  Score=41.25  Aligned_cols=187  Identities=7%  Similarity=-0.023  Sum_probs=109.2

Q ss_pred             eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      +.+++|.+..+.++-.. .++.|+..++........+..  ....+..+++..-+..++.+-...+.|...++.......
T Consensus        38 ~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~--~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~  115 (263)
T d1npea_          38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ--DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV  115 (263)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT--TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred             EEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEe--ccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEE
Confidence            56788888777666554 567788888865543222221  123567888888788888776667889888876543211


Q ss_pred             c--c------------ccCceEEEecCCCc--EEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe-ecCCcEEEE
Q psy8758          83 N--V------------HKDMTSAAANEDFN--LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYDKSLRLY  145 (198)
Q Consensus        83 ~--~------------~~~~~~~~~~~~~~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v~  145 (198)
                      .  .            ..+.++.+-.....  |.--++.. ..........-.....+++.+.++.|..+ ...+.|...
T Consensus       116 l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG-~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~  194 (263)
T d1npea_         116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL  194 (263)
T ss_dssp             EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCC-CCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEE
Confidence            1  1            11112222222222  33333432 11222222233456889999887777555 457889999


Q ss_pred             EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      ++......... .+- ....++++. ++.+..+-...+.|...|..+++.+
T Consensus       195 ~~~g~~~~~v~-~~~-~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~  242 (263)
T d1npea_         195 NPAQPGRRKVL-EGL-QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEM  242 (263)
T ss_dssp             ETTEEEEEEEE-ECC-CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             ECCCCCeEEEE-CCC-CCcEEEEEE-CCEEEEEECCCCEEEEEECCCCccc
Confidence            98765554444 232 234577775 3444445556788999998887653

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.42  E-value=0.012  Score=43.53  Aligned_cols=54  Identities=13%  Similarity=0.064  Sum_probs=35.7

Q ss_pred             cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      .+.-||+.+++.+......  .+...-..+-.|.++++++.||.++.+|.+||+.|
T Consensus       458 ~l~AiD~~tGk~~W~~~~~--~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~L  511 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL  511 (573)
T ss_dssp             EEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cEEEeCCCCCceEeeecCC--CCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEe
Confidence            4556677777766655322  11111122335677888899999999999999987

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.24  E-value=0.0085  Score=44.30  Aligned_cols=98  Identities=13%  Similarity=0.109  Sum_probs=61.9

Q ss_pred             CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-E
Q psy8758          97 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-F  175 (198)
Q Consensus        97 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~  175 (198)
                      |.+.-||+.+ ++.+-..+... +...-.++-.+.++++++.|+.++.+|.++|+.+..+..+....-.-+.|..+|+ |
T Consensus       457 G~l~AiD~~t-Gk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQY  534 (573)
T d1kb0a2         457 GRLLAWDPVA-QKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY  534 (573)
T ss_dssp             EEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             ccEEEeCCCC-CceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence            5688888887 66665554321 2222223446778888999999999999999999887544321112255666886 4


Q ss_pred             EEEecC----------------CCeEEEEecCCCccc
Q psy8758         176 VISASD----------------EMNLRVWKAHASEKL  196 (198)
Q Consensus       176 l~~~~~----------------dg~v~~w~~~~~~~~  196 (198)
                      ++..+.                .+.|.+|.+....++
T Consensus       535 v~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~g~~~~  571 (573)
T d1kb0a2         535 VSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKARM  571 (573)
T ss_dssp             EEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBCCC
T ss_pred             EEEEeCCCcccccccccccCCCCCEEEEEEeCCcCCC
Confidence            443221                246888888655543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.24  E-value=0.02  Score=42.30  Aligned_cols=81  Identities=11%  Similarity=0.017  Sum_probs=52.8

Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-  174 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-  174 (198)
                      .|.|..+|+.+ ++.+-+.... .+..+-.++-.+.++++++.|+.++-+|.++|+.+..+..+....-.-+.|..||+ 
T Consensus       443 ~G~l~AiD~~T-G~~~W~~~~~-~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         443 MGQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             CEEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cccEEEeccCC-CceeeEcCCC-CCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            46789999988 6666554321 11111122334667888999999999999999999887555433333356666886 


Q ss_pred             EEEE
Q psy8758         175 FVIS  178 (198)
Q Consensus       175 ~l~~  178 (198)
                      |++.
T Consensus       521 Yi~v  524 (571)
T d2ad6a1         521 YIGS  524 (571)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            5543

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.012  Score=38.97  Aligned_cols=190  Identities=4%  Similarity=-0.061  Sum_probs=106.4

Q ss_pred             cceeEEEECCCCceEEEee-CCCeEEEEEccCCcee---eeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758           2 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKL---GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ   77 (198)
Q Consensus         2 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~   77 (198)
                      +.+.+++|.+..+.++-.. ..+.|+-.++......   ..+.. .....+..+++.+.+..++.+-...+.|.+.++..
T Consensus        30 ~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~-~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g  108 (266)
T d1ijqa1          30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  108 (266)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEe-CCCCCcceEEEeeccceEEEEecCCCEEEeEecCC
Confidence            3466788888777666554 4566666665432211   11111 12234567888888888888766778899988865


Q ss_pred             CCCccc--------------cccCceEEEe-cCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCC
Q psy8758          78 LNSPLN--------------VHKDMTSAAA-NEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDK  140 (198)
Q Consensus        78 ~~~~~~--------------~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~  140 (198)
                      ......              ...+.++.+. +..+.|.-.++..  .....+ ...-.....+++.+.++.|..+ ...+
T Consensus       109 ~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dG--s~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~  186 (266)
T d1ijqa1         109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH  186 (266)
T ss_dssp             SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             ceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCC--CceecccccccceeeEEEeeccccEEEEecCCcC
Confidence            432111              0111222222 2233454455543  333333 2333557899999987766655 5568


Q ss_pred             cEEEEEcCCCceeeEEecc-CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758         141 SLRLYLAHQGHSRDIYHTK-RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK  195 (198)
Q Consensus       141 ~v~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~  195 (198)
                      .|...++............ ......++++. ++.++.+-..++.|...+..+++.
T Consensus       187 ~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~  241 (266)
T d1ijqa1         187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD  241 (266)
T ss_dssp             EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred             EEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCCCcc
Confidence            8999998765443333222 12345677776 334444445678888888777654

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.21  E-value=0.0087  Score=44.11  Aligned_cols=99  Identities=13%  Similarity=0.136  Sum_probs=62.6

Q ss_pred             CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-
Q psy8758          96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-  174 (198)
Q Consensus        96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-  174 (198)
                      .|.+..+|+.+ ++.+-.... ..+...-.+.-.+.+++.++.|+.++-+|.++|+.+..+..+....-.-+.+..+|+ 
T Consensus       437 ~G~l~A~D~~t-Gk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkq  514 (560)
T d1kv9a2         437 SGALLAWDPVK-QKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ  514 (560)
T ss_dssp             EEEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ccceEEEeCCC-CeEeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence            46788888888 566555432 222222233345678888999999999999999999887554322222356666886 


Q ss_pred             EEEEecC--------------------CCeEEEEecCCCccc
Q psy8758         175 FVISASD--------------------EMNLRVWKAHASEKL  196 (198)
Q Consensus       175 ~l~~~~~--------------------dg~v~~w~~~~~~~~  196 (198)
                      +|+..+.                    .+.|.+|.+....++
T Consensus       515 yv~v~aG~g~~~~~~~~~~~~~~~~~~g~~l~~F~L~g~~~~  556 (560)
T d1kv9a2         515 YVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQL  556 (560)
T ss_dssp             EEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCC
T ss_pred             EEEEEeCCCcccccccccccccccCCCCCEEEEEEeCCCCCC
Confidence            5543221                    246888888755443

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.014  Score=38.48  Aligned_cols=178  Identities=2%  Similarity=-0.087  Sum_probs=102.5

Q ss_pred             CceEEEeeCCCeEEEEEccCCceee---eeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc--c----
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLG---PIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL--N----   83 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~--~----   83 (198)
                      |.+|+-+. .+.|+-.+++......   ..........+..++|.+..+.++.+-..++.|+..++.......  .    
T Consensus         1 ~~fLl~s~-~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~   79 (263)
T d1npea_           1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (263)
T ss_dssp             CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             CCEEEEeC-CCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccc
Confidence            34455443 3467777775433211   111111233467899999889888876667888888876443221  1    


Q ss_pred             --------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC-C--cEEEEEcCCCce
Q psy8758          84 --------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-K--SLRLYLAHQGHS  152 (198)
Q Consensus        84 --------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d-~--~v~v~d~~~~~~  152 (198)
                              .-.+.++.+-...+.|...++.. ......+......+..++++|...++...... +  .|.--++.....
T Consensus        80 ~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg-~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDG-TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             cccEEEEeccCCeEEEeccCCCEEEEEecCC-ceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence                    11223344555566777777764 22222233334568899999987776654322 2  344445554433


Q ss_pred             eeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCC
Q psy8758         153 RDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS  193 (198)
Q Consensus       153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~  193 (198)
                      .... ...-....++++.+.++.|..+ ...+.|...+++..
T Consensus       159 ~~i~-~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~  199 (263)
T d1npea_         159 RILA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP  199 (263)
T ss_dssp             EEEE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred             eeee-eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCC
Confidence            3333 2333567899999887766554 55678888887643

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.05  E-value=0.032  Score=41.06  Aligned_cols=55  Identities=13%  Similarity=0.089  Sum_probs=38.4

Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |.+.-+|+.+++.+.....+  .+..+-..+-.+.+++.++.||.++-+|.+||+.|
T Consensus       438 G~l~A~D~~tGk~~W~~~~~--~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~L  492 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL  492 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cceEEEeCCCCeEeeeccCC--CCCCCceeEECCCEEEEECCCCcEEEEECCCCcEe
Confidence            45777888888887765332  22222222334567778899999999999999987

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.97  E-value=0.023  Score=39.18  Aligned_cols=73  Identities=15%  Similarity=0.130  Sum_probs=50.6

Q ss_pred             eEEEEEccCCCEEEEeecC-CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC------CeEEEEecCCC
Q psy8758         121 VTSVDYSPTGREFVAGGYD-KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE------MNLRVWKAHAS  193 (198)
Q Consensus       121 i~~~~~sp~~~~l~~~~~d-~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~v~~w~~~~~  193 (198)
                      ....++.++|++++.|+.+ ..+.+||..+......-.......-..++..+||++++.++.+      +.+.+||..+.
T Consensus        78 ~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~  157 (387)
T d1k3ia3          78 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK  157 (387)
T ss_dssp             SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred             eeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCC
Confidence            4456788999999988765 5899999998766443211111223356778899988887643      46889998765

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.022  Score=37.54  Aligned_cols=166  Identities=7%  Similarity=-0.065  Sum_probs=102.1

Q ss_pred             CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-----Cc-------------ccc
Q psy8758          23 MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-----SP-------------LNV   84 (198)
Q Consensus        23 ~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-----~~-------------~~~   84 (198)
                      ..|+..++++.+....+.   ....+..++|++..+.++.+-...+.|.-.++....     ..             +..
T Consensus        10 ~~I~~~~l~~~~~~~~~~---~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~   86 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW   86 (266)
T ss_dssp             SSEEEEETTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred             CeEEEEECCCCcceeeeC---CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEee
Confidence            358888987655333322   234567899999888888875556667666553211     00             111


Q ss_pred             ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEeccCcc
Q psy8758          85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                      ..+.++.+-...+.|.+.++.. ................++++|...+|....  ..+.|.-.++......... ...-.
T Consensus        87 ~~~~lY~~d~~~~~I~v~~~~g-~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~-~~~~~  164 (266)
T d1ijqa1          87 IHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQ  164 (266)
T ss_dssp             TTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSSCS
T ss_pred             ccceEEEEecCCCEEEeEecCC-ceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccc-ccccc
Confidence            2334555556677888888875 233333444456678999999766665543  3456777777655444443 33335


Q ss_pred             cEEEEEEcCCCCEEEEe-cCCCeEEEEecCCC
Q psy8758         163 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS  193 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~  193 (198)
                      ...++++.+.++.|..+ ...+.|...++...
T Consensus       165 ~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~  196 (266)
T d1ijqa1         165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG  196 (266)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             eeeEEEeeccccEEEEecCCcCEEEEEECCCC
Confidence            67899999987766655 55678888888643

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.89  E-value=0.046  Score=40.38  Aligned_cols=82  Identities=15%  Similarity=0.113  Sum_probs=55.8

Q ss_pred             CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC
Q psy8758          95 EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK  174 (198)
Q Consensus        95 ~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~  174 (198)
                      ..|.+.-+|+.+ ++.+-..+.+ .++..-.++..+.++++++.|+.++-+|.++|+.+..+..+....-.-+.|..+|+
T Consensus       464 ~~G~l~AiD~~T-G~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~  541 (582)
T d1flga_         464 HVGSLRAMDPVS-GKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             CSEEEEEECTTT-CCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CCCeEEEEcCCC-CcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            457788899988 6666655432 22332234456778888999999999999999999888554332222357777886


Q ss_pred             -EEEE
Q psy8758         175 -FVIS  178 (198)
Q Consensus       175 -~l~~  178 (198)
                       |++.
T Consensus       542 qYv~i  546 (582)
T d1flga_         542 QYLGV  546 (582)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence             5543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.84  E-value=0.052  Score=40.22  Aligned_cols=79  Identities=11%  Similarity=0.017  Sum_probs=51.1

Q ss_pred             CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-E
Q psy8758          97 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-F  175 (198)
Q Consensus        97 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~  175 (198)
                      |.|.-||+.+ ++.+-.... ..+...-.++-.|.+++.|+.||.++-+|.++|+.+..+..+....-.-+.|..+|+ |
T Consensus       453 G~l~A~D~~T-G~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQY  530 (596)
T d1w6sa_         453 GQIKAYNAIT-GDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQY  530 (596)
T ss_dssp             EEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             ceEEEEeCCC-CceecccCC-CCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEE
Confidence            6788899887 555544321 222222233445778888999999999999999999887554322222245666876 4


Q ss_pred             EE
Q psy8758         176 VI  177 (198)
Q Consensus       176 l~  177 (198)
                      ++
T Consensus       531 va  532 (596)
T d1w6sa_         531 VA  532 (596)
T ss_dssp             EE
T ss_pred             EE
Confidence            44

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.28  E-value=0.088  Score=36.18  Aligned_cols=69  Identities=13%  Similarity=0.137  Sum_probs=45.8

Q ss_pred             eEEEEE--ccC-CC-EEEEeecCCcEEEEEcCC---Cc----eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758         121 VTSVDY--SPT-GR-EFVAGGYDKSLRLYLAHQ---GH----SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK  189 (198)
Q Consensus       121 i~~~~~--sp~-~~-~l~~~~~d~~v~v~d~~~---~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~  189 (198)
                      +..+++  +|. |. ++++...+|.+..|.+..   +.    .+..+  .-...+..+.+.+..+.|+.+-++.-++.++
T Consensus       130 vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f--~~~~q~EGCVvDde~~~LyisEE~~Giw~~~  207 (353)
T d1h6la_         130 VYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAF--KMNSQTEGMAADDEYGSLYIAEEDEAIWKFS  207 (353)
T ss_dssp             CCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEE--ECSSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred             ceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeecc--CCCCccceEEEeCCCCcEEEecCccceEEEE
Confidence            455665  665 54 456667789988887742   22    22223  2236789999999988888888877676666


Q ss_pred             cC
Q psy8758         190 AH  191 (198)
Q Consensus       190 ~~  191 (198)
                      .+
T Consensus       208 a~  209 (353)
T d1h6la_         208 AE  209 (353)
T ss_dssp             SS
T ss_pred             ec
Confidence            54

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.21  E-value=0.12  Score=36.87  Aligned_cols=53  Identities=9%  Similarity=0.084  Sum_probs=36.1

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-------eecCceeeEEeCCC
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-------VMSLRSNMVSWNPM   56 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~   56 (198)
                      .-.+|+|.|+|+++++--..|.|++++..+++. ..+...       ........++|+|+
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~-~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcE-eecccCCccccccCCCCceeeEEeCCC
Confidence            457899999999887765578999998776653 222221       11244568999985

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.03  E-value=0.11  Score=34.86  Aligned_cols=167  Identities=12%  Similarity=0.135  Sum_probs=100.9

Q ss_pred             CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc--c---------cccCceE
Q psy8758          22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL--N---------VHKDMTS   90 (198)
Q Consensus        22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~--~---------~~~~~~~   90 (198)
                      ...+.|.|+..+..+  .+..   ..--+...+|..+.++.-+  ..++.++|+++..+.-  .         .-.+..+
T Consensus        44 ~~~VvIidl~n~~~~--~Rrp---i~AdsAIMhP~~~IiALra--g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L  116 (327)
T d1utca2          44 QAQVVIIDMNDPSNP--IRRP---ISADSAIMNPASKVIALKA--GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV  116 (327)
T ss_dssp             EEEEEEEETTSTTSC--EEEE---CCCSEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEEECSSCCCEEEESSSSEE
T ss_pred             CceEEEEECCCCCcc--eecc---cchhhhhcCCCCcEEEEec--CCeEEEEehhHhhhhceEEcCCCcEEEEecCCCEE
Confidence            347888888766532  2221   1223566889888877654  5689999998654321  1         1122223


Q ss_pred             EEecCCCcEEEEEccCCCcceeeecCCCc----ceEEEEEccCCCEEEEeec-------CCcEEEEEcCCCce-------
Q psy8758          91 AAANEDFNLYSYDIRQLNSPLNVHKDMTS----AVTSVDYSPTGREFVAGGY-------DKSLRLYLAHQGHS-------  152 (198)
Q Consensus        91 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~i~~~~~sp~~~~l~~~~~-------d~~v~v~d~~~~~~-------  152 (198)
                      +. -.+..|+-|+++....|.+.+..|..    .|-.-..+++.++++..+-       .|.+.+|..+.+..       
T Consensus       117 ~l-VT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGha  195 (327)
T d1utca2         117 AL-VTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA  195 (327)
T ss_dssp             EE-ECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSE
T ss_pred             EE-EcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCcccccee
Confidence            22 24556899999765678887766643    4666677888888765431       35677787663210       


Q ss_pred             -----------------------------eeEEeccC----------------------cccEEEEEEcCCCCEEEEecC
Q psy8758         153 -----------------------------RDIYHTKR----------------------MQHVTHTVWSLDNKFVISASD  181 (198)
Q Consensus       153 -----------------------------~~~~~~~~----------------------~~~v~~~~~s~~~~~l~~~~~  181 (198)
                                                   +..++.++                      ....-++..|+.-..+..-+.
T Consensus       196 a~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK  275 (327)
T d1utca2         196 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK  275 (327)
T ss_dssp             EEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEET
T ss_pred             eeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEec
Confidence                                         00011111                      122345555555556666778


Q ss_pred             CCeEEEEecCCCccc
Q psy8758         182 EMNLRVWKAHASEKL  196 (198)
Q Consensus       182 dg~v~~w~~~~~~~~  196 (198)
                      -|.+++||+.|+.++
T Consensus       276 ~G~i~lyDleTgt~i  290 (327)
T d1utca2         276 YGYIHLYDLETGTCI  290 (327)
T ss_dssp             TSEEEEEETTTCCEE
T ss_pred             CcEEEEEEcccccEE
Confidence            899999999999876

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.79  E-value=0.042  Score=40.59  Aligned_cols=55  Identities=15%  Similarity=0.140  Sum_probs=39.1

Q ss_pred             CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758         140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                      |.+.-+|+.+++.+.....+  .++.+-..+..|.++++++.||.++.+|.+|||+|
T Consensus       466 G~l~AiD~~TG~i~W~~~~~--~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~L  520 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL  520 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CeEEEEcCCCCcEEeecCCC--CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEe
Confidence            45777888888877766433  22222223346677788999999999999999987

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.54  E-value=0.18  Score=33.77  Aligned_cols=174  Identities=10%  Similarity=0.114  Sum_probs=98.4

Q ss_pred             EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---c
Q psy8758           6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---L   82 (198)
Q Consensus         6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~   82 (198)
                      +.-.+|..+.||.-+ ..++++||+++.+.   ++.+....+|.--.|-.+...-++   .+..++-|++.....+   +
T Consensus        67 sAIMhP~~~IiALra-g~~LQiFnletK~k---lks~~~~e~VvfWkWis~~~L~lV---T~taVYHW~~~g~s~P~k~f  139 (327)
T d1utca2          67 SAIMNPASKVIALKA-GKTLQIFNIEMKSK---MKAHTMTDDVTFWKWISLNTVALV---TDNAVYHWSMEGESQPVKMF  139 (327)
T ss_dssp             EEEECSSSSEEEEEE-TTEEEEEETTTTEE---EEEEECSSCCCEEEESSSSEEEEE---CSSEEEEEESSSSCCCEEEE
T ss_pred             hhhcCCCCcEEEEec-CCeEEEEehhHhhh---hceEEcCCCcEEEEecCCCEEEEE---cCCceEEEcccCCCCchhhh
Confidence            344678888887766 45899999988765   444444566766677655443333   3567888887532211   1


Q ss_pred             ccccC------------------------------------------------------------------ceE--EE-e
Q psy8758          83 NVHKD------------------------------------------------------------------MTS--AA-A   93 (198)
Q Consensus        83 ~~~~~------------------------------------------------------------------~~~--~~-~   93 (198)
                      ..|..                                                                  .++  +. +
T Consensus       140 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~  219 (327)
T d1utca2         140 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG  219 (327)
T ss_dssp             ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred             hhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccccceeeeeEEEEcCCCCCCceEEEEEECC
Confidence            11100                                                                  011  11 1


Q ss_pred             cCCCcEEEEEccCCCc---c--eee---ec---CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcc
Q psy8758          94 NEDFNLYSYDIRQLNS---P--LNV---HK---DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ  162 (198)
Q Consensus        94 ~~~~~i~~~d~~~~~~---~--~~~---~~---~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~  162 (198)
                      ...+++++.++..+..   +  .+.   +.   ...+-.-+|..|+.-..+..-+.-|.+++||+.++.++..-+. ...
T Consensus       220 ~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRI-s~~  298 (327)
T d1utca2         220 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGE  298 (327)
T ss_dssp             TTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSS
T ss_pred             CCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeec-CCC
Confidence            2235677777654211   1  111   10   1123345677777777788888899999999999999876532 224


Q ss_pred             cEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758         163 HVTHTVWSLDNKFVISASDEMNLRV  187 (198)
Q Consensus       163 ~v~~~~~s~~~~~l~~~~~dg~v~~  187 (198)
                      .|...+-+.+..=+++...+|.|..
T Consensus       299 ~iF~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         299 TIFVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             CEEEEEEETTTTEEEEEETTSEEEE
T ss_pred             ceEEeccCCCCceEEEECCCCeEEE
Confidence            5554444444333444446666543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.26  E-value=0.36  Score=35.60  Aligned_cols=182  Identities=12%  Similarity=0.020  Sum_probs=101.4

Q ss_pred             CceEEEeeCCCeEEEEEc-cCCceeeeeeeeeec--C-------ceeeEEeCCC----CCeEEEEecCCccEEEEeccCC
Q psy8758          13 NKFVISASDEMNLRVWKA-HASEKLGPIRKVVMS--L-------RSNMVSWNPM----EAFVFTAANEDFNLYSYDIRQL   78 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~-~~~~~~~~~~~~~~~--~-------~v~~~~~~~~----~~~~~~~~~~d~~i~~~d~~~~   78 (198)
                      |..+++.+.++.+...|. .+++.+-.+......  .       .-+.+++.++    ...++. ++.|+.+.-.|.++.
T Consensus        63 g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~-~t~dg~l~Alda~tG  141 (596)
T d1w6sa_          63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK-TQLDGNVAALNAETG  141 (596)
T ss_dssp             TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE-ECTTSEEEEEETTTC
T ss_pred             CEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEE-EeCCCCeEeeccccC
Confidence            333344444567777776 467765444321100  0       0123444332    223444 567899988888876


Q ss_pred             CCcccccc----------------CceEEEec------CCCcEEEEEccCCCcceeeecCCC------------------
Q psy8758          79 NSPLNVHK----------------DMTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMT------------------  118 (198)
Q Consensus        79 ~~~~~~~~----------------~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~------------------  118 (198)
                      +.......                +..++.+.      ..|.|+-+|+++ ++.+-.+....                  
T Consensus       142 ~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~T-G~~~W~~~t~~~~~~~~~~~~~~~~~~~~  220 (596)
T d1w6sa_         142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKT-GEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (596)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTT-CCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             ceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCC-CcEEEEeeccCCccccccccccccccccc
Confidence            64433211                11244443      348899999998 66665542111                  


Q ss_pred             --------------------cceEEEEEccCCCEEEEeec----------------CCcEEEEEcCCCceeeEEeccCc-
Q psy8758         119 --------------------SAVTSVDYSPTGREFVAGGY----------------DKSLRLYLAHQGHSRDIYHTKRM-  161 (198)
Q Consensus       119 --------------------~~i~~~~~sp~~~~l~~~~~----------------d~~v~v~d~~~~~~~~~~~~~~~-  161 (198)
                                          ..-..+++.|....+..+..                ...+.-.|+++++.+..+...|. 
T Consensus       221 g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D  300 (596)
T d1w6sa_         221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (596)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccccccccccccccccceecc
Confidence                                01224566666665554432                23577889999998876633221 


Q ss_pred             -------ccEEEEE-EcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758         162 -------QHVTHTV-WSLDNK---FVISASDEMNLRVWKAHASEKL  196 (198)
Q Consensus       162 -------~~v~~~~-~s~~~~---~l~~~~~dg~v~~w~~~~~~~~  196 (198)
                             ....-+. -..+|+   .++....+|.++++|..+|+.+
T Consensus       301 ~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i  346 (596)
T d1w6sa_         301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV  346 (596)
T ss_dssp             SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccCCccccceeeeeccccccccccceeccccccceeeecCCCCcee
Confidence                   1111112 123443   5777889999999999999876

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.95  E-value=0.36  Score=33.87  Aligned_cols=58  Identities=16%  Similarity=0.282  Sum_probs=39.6

Q ss_pred             eeEEEECCCCceEEEe-----eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe
Q psy8758           4 VTHTVWSLDNKFVISA-----SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA   64 (198)
Q Consensus         4 v~~~~~s~~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~   64 (198)
                      +..+++||++++++.+     ++.-.++++|+.+++.+.....   ......+.|.++++.++.+.
T Consensus       127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~---~~~~~~~~W~~D~~~~~Y~~  189 (430)
T d1qfma1         127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE---RVKFSCMAWTHDGKGMFYNA  189 (430)
T ss_dssp             EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE---EECSCCEEECTTSSEEEEEE
T ss_pred             ecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc---cccccceEEcCCCCEEEEEE
Confidence            3456889999988754     2234789999999875432211   11235789999999988764

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.88  E-value=0.47  Score=33.64  Aligned_cols=61  Identities=7%  Similarity=0.114  Sum_probs=43.2

Q ss_pred             eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe-------ccCcccEEEEEEcCC
Q psy8758         112 NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH-------TKRMQHVTHTVWSLD  172 (198)
Q Consensus       112 ~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~-------~~~~~~v~~~~~s~~  172 (198)
                      ..+...-...++|+|.|||++|++--..|.|++++..++.......       .........++|+|+
T Consensus        20 ~~ia~~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          20 KVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             EEEECCCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            3333334567899999999998887667999999988776544331       112357889999995

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=92.79  E-value=0.67  Score=29.42  Aligned_cols=152  Identities=12%  Similarity=0.142  Sum_probs=80.0

Q ss_pred             CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEE
Q psy8758          13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAA   92 (198)
Q Consensus        13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~   92 (198)
                      .+.++.+...|.+.++-+..++..+ +.    ..+|... -.|..       +-|..+.+-|+...+             
T Consensus        26 d~ll~~~~seG~vni~~l~g~~~vk-Lt----kePI~~~-~~Pk~-------~ldfi~f~RDV~kGk-------------   79 (313)
T d2hu7a1          26 DKLLVVGFSEGSVNAYLYDGGETVK-LN----REPINSV-LDPHY-------GVGRVILVRDVSKGA-------------   79 (313)
T ss_dssp             TEEEEEEEETTEEEEEEESSSSCEE-CC----SSCCSEE-CEECT-------TBSEEEEEEECSTTS-------------
T ss_pred             CcEEEEEeccceEEEEEEeCCEEEE-Ee----cccccCc-CCCcc-------CcceEEEEeehhcCc-------------
Confidence            3467777788888888887665322 21    1222211 11211       122233344444332             


Q ss_pred             ecCCCcEEEEEccCCCcceeeecCC-CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc--------cc
Q psy8758          93 ANEDFNLYSYDIRQLNSPLNVHKDM-TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM--------QH  163 (198)
Q Consensus        93 ~~~~~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~--------~~  163 (198)
                        +-..+.+-+++.+++. +.+... +-.|.++++. +.+...+|+......+|-+..|+.........-        ..
T Consensus        80 --E~Hai~~~Nlk~~GEE-~~i~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~  155 (313)
T d2hu7a1          80 --EQHALFKVNTSRPGEE-QRLEAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDL  155 (313)
T ss_dssp             --CCEEEEEEETTSTTCE-EECTTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTE
T ss_pred             --ceeeEEEEccCCCCee-eEecCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCe
Confidence              1122444444432333 333332 2556677664 345677888888889999988877655432222        23


Q ss_pred             EEEEEE-cCCCCEEEEecC-CCeEEEEecCCCc
Q psy8758         164 VTHTVW-SLDNKFVISASD-EMNLRVWKAHASE  194 (198)
Q Consensus       164 v~~~~~-s~~~~~l~~~~~-dg~v~~w~~~~~~  194 (198)
                      |..+.+ .++.+-+.++.- .|.+++++...|.
T Consensus       156 I~G~g~~~g~~~sfF~adl~SG~lri~tpkeGS  188 (313)
T d2hu7a1         156 IAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGS  188 (313)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEECCSSEE
T ss_pred             EEEEeeecCCcceEEEEecccCCEEEecCCCCc
Confidence            444443 344344555544 7889998877654

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.04  E-value=1.3  Score=30.92  Aligned_cols=189  Identities=12%  Similarity=0.062  Sum_probs=101.9

Q ss_pred             eEEEECCCCceEEEeeCC----------------CeEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEEecC
Q psy8758           5 THTVWSLDNKFVISASDE----------------MNLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTAANE   66 (198)
Q Consensus         5 ~~~~~s~~~~~l~~~~~d----------------~~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~   66 (198)
                      ..++|++|++.|+....+                ..+..+.+.+......+....  ....+..+..++++++++.....
T Consensus       174 ~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~  253 (430)
T d1qfma1         174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE  253 (430)
T ss_dssp             CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred             cceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeec
Confidence            468899999877644322                257777776654322222111  22235567789999998764322


Q ss_pred             --Cc--cEEEEeccCCCCcc-------------------cccc-CceEEEec---CCCcEEEEEccCCCcc--eeeecCC
Q psy8758          67 --DF--NLYSYDIRQLNSPL-------------------NVHK-DMTSAAAN---EDFNLYSYDIRQLNSP--LNVHKDM  117 (198)
Q Consensus        67 --d~--~i~~~d~~~~~~~~-------------------~~~~-~~~~~~~~---~~~~i~~~d~~~~~~~--~~~~~~~  117 (198)
                        +.  .+++.++.......                   ..+. +..++...   .++.|...++..+...  ...+..+
T Consensus       254 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~  333 (430)
T d1qfma1         254 GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH  333 (430)
T ss_dssp             SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCC
T ss_pred             cCCccEEEEEeeCCCcccccccccceeEeecccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEeccc
Confidence              22  35555654322111                   0111 11222222   3466777777653321  2233334


Q ss_pred             CcceEEEEEccCCCEEEEee-cCC--cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEE-E-ec--CCCeEEEEec
Q psy8758         118 TSAVTSVDYSPTGREFVAGG-YDK--SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI-S-AS--DEMNLRVWKA  190 (198)
Q Consensus       118 ~~~i~~~~~sp~~~~l~~~~-~d~--~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~-~~--~dg~v~~w~~  190 (198)
                      ...+..-.+...+.+|+..- .++  .|++++...+...... ....+.+..+...++...+. + .+  .=.+++-+|+
T Consensus       334 ~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~~~~~~~~-~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl  412 (430)
T d1qfma1         334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF-PLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL  412 (430)
T ss_dssp             SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE-CCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred             CcceeeeEEEEECCEEEEEEEcCCEeEEEEEECCCCcEEEec-CCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEEC
Confidence            44454444445556666554 443  6889999888776554 33335666666666655333 2 22  2378999999


Q ss_pred             CCCc
Q psy8758         191 HASE  194 (198)
Q Consensus       191 ~~~~  194 (198)
                      .+++
T Consensus       413 ~t~~  416 (430)
T d1qfma1         413 TKEE  416 (430)
T ss_dssp             TSSS
T ss_pred             CCCC
Confidence            9875

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.78  E-value=2.1  Score=29.47  Aligned_cols=141  Identities=11%  Similarity=0.020  Sum_probs=81.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccC-------CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHA-------SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI   75 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~   75 (198)
                      ..+-++.++...++++|+.++ +.|....+       ......+.....-..|..++|+-+  .+++.  .++.+..++.
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~--~~~~l~~~~~  112 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVS--TRNALYSLDL  112 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEE--ESSEEEEEES
T ss_pred             ccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEE--eCCCEEEEEe
Confidence            355678888777788887774 66776431       111111111111235777888643  34432  3455666665


Q ss_pred             cCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE
Q psy8758          76 RQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI  155 (198)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~  155 (198)
                      ...                              ...........++.++.++|.  .++....++.+.++++..+.....
T Consensus       113 ~~l------------------------------~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~  160 (381)
T d1xipa_         113 EEL------------------------------SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL  160 (381)
T ss_dssp             SST------------------------------TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE
T ss_pred             ecc------------------------------ccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccc
Confidence            542                              112222223455777777774  466666789999999988765443


Q ss_pred             Eec----cCcccEEEEEEcCCCCEEEEec
Q psy8758         156 YHT----KRMQHVTHTVWSLDNKFVISAS  180 (198)
Q Consensus       156 ~~~----~~~~~v~~~~~s~~~~~l~~~~  180 (198)
                      ...    .-.+.+.+++|++.|..++++.
T Consensus       161 ~~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         161 AQNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             EESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             cCCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            210    1125678888888888777764

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=89.49  E-value=2.1  Score=29.11  Aligned_cols=111  Identities=13%  Similarity=0.123  Sum_probs=69.1

Q ss_pred             ceeEEEE--CCC-Cc-eEEEeeCCCeEEEEEccC---Cc-eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758           3 HVTHTVW--SLD-NK-FVISASDEMNLRVWKAHA---SE-KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD   74 (198)
Q Consensus         3 ~v~~~~~--s~~-~~-~l~~~~~d~~i~i~~~~~---~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d   74 (198)
                      .+..+++  ++. |. ++++...+|.+..|.+..   +. ....++.+.....+..+.+.+....|+++ .++.-++.++
T Consensus       129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~Lyis-EE~~Giw~~~  207 (353)
T d1h6la_         129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYIA-EEDEAIWKFS  207 (353)
T ss_dssp             SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEEE-ETTTEEEEEE
T ss_pred             cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEEEe-cCccceEEEE
Confidence            3566776  664 44 456667889998887742   22 23445555556678899999998999885 5676677766


Q ss_pred             ccCCC---Cc-------------------ccc--ccCceEEEecCCCcEEEEEccCCCcceeee
Q psy8758          75 IRQLN---SP-------------------LNV--HKDMTSAAANEDFNLYSYDIRQLNSPLNVH  114 (198)
Q Consensus        75 ~~~~~---~~-------------------~~~--~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~  114 (198)
                      .....   ..                   +..  ..+.++++.-.+.+..+||...+...+-.+
T Consensus       208 a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F  271 (353)
T d1h6la_         208 AEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADF  271 (353)
T ss_dssp             SSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             eccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceE
Confidence            54211   00                   111  122456666677889999987644444443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.56  E-value=3.1  Score=28.62  Aligned_cols=142  Identities=9%  Similarity=-0.010  Sum_probs=72.0

Q ss_pred             ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758           3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL   82 (198)
Q Consensus         3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~   82 (198)
                      .|..++|+.+  .++.. .++.+..++..+-........  ...++..+.++|..  ++.. ..++.+.++++.......
T Consensus        88 ~v~~vafs~d--~l~v~-~~~~l~~~~~~~l~~~~~~~~--~~~~~~~~~~~p~~--~~l~-~~~~~~~~~~l~~~~~~~  159 (381)
T d1xipa_          88 DVIFVCFHGD--QVLVS-TRNALYSLDLEELSEFRTVTS--FEKPVFQLKNVNNT--LVIL-NSVNDLSALDLRTKSTKQ  159 (381)
T ss_dssp             TEEEEEEETT--EEEEE-ESSEEEEEESSSTTCEEEEEE--CSSCEEEEEECSSE--EEEE-ETTSEEEEEETTTCCEEE
T ss_pred             CeEEEEeeCC--EEEEE-eCCCEEEEEeecccccccccc--ccccccceecCCce--eEEE-ecCCCEEEEEeccCcccc
Confidence            4678888754  44444 455677887765433222222  34567788888753  2222 357777777776531000


Q ss_pred             ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE-EEcCCCceeeEEeccCc
Q psy8758          83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL-YLAHQGHSRDIYHTKRM  161 (198)
Q Consensus        83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v-~d~~~~~~~~~~~~~~~  161 (198)
                             ++                 .....+. -.....+++|++.|+.++++..+. ..+ -++.....+.. .....
T Consensus       160 -------~~-----------------~~v~~~~-~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~~~~~-p~~~~  212 (381)
T d1xipa_         160 -------LA-----------------QNVTSFD-VTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPSELEE-LPVEE  212 (381)
T ss_dssp             -------EE-----------------ESEEEEE-ECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCHHHHT-SCTTT
T ss_pred             -------cc-----------------CCcceEE-ecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCccccCC-CcCCC
Confidence                   00                 0000011 124577888888888777764322 111 11111110000 01123


Q ss_pred             ccEEEEEEcCCCCEEEEe
Q psy8758         162 QHVTHTVWSLDNKFVISA  179 (198)
Q Consensus       162 ~~v~~~~~s~~~~~l~~~  179 (198)
                      ..|.++.|-.+..++++-
T Consensus       213 ~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         213 YSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             SEEEEEEESSSSEEEEEE
T ss_pred             cceeEEEEecCceEEEEE
Confidence            467888998777766643