Psyllid ID: psy886
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 962 | 2.2.26 [Sep-21-2011] | |||||||
| Q7PPA5 | 1018 | Calcium-transporting ATPa | yes | N/A | 0.754 | 0.713 | 0.754 | 0.0 | |
| P22700 | 1020 | Calcium-transporting ATPa | yes | N/A | 0.754 | 0.711 | 0.719 | 0.0 | |
| Q292Q0 | 1002 | Calcium-transporting ATPa | yes | N/A | 0.747 | 0.717 | 0.702 | 0.0 | |
| P35316 | 1003 | Calcium-transporting ATPa | N/A | N/A | 0.747 | 0.716 | 0.669 | 0.0 | |
| Q03669 | 1041 | Sarcoplasmic/endoplasmic | yes | N/A | 0.753 | 0.696 | 0.612 | 0.0 | |
| P20647 | 1042 | Sarcoplasmic/endoplasmic | yes | N/A | 0.753 | 0.695 | 0.614 | 0.0 | |
| P13585 | 994 | Sarcoplasmic/endoplasmic | no | N/A | 0.751 | 0.727 | 0.615 | 0.0 | |
| P11607 | 1042 | Sarcoplasmic/endoplasmic | yes | N/A | 0.753 | 0.695 | 0.610 | 0.0 | |
| O46674 | 997 | Sarcoplasmic/endoplasmic | yes | N/A | 0.753 | 0.727 | 0.610 | 0.0 | |
| O55143 | 1044 | Sarcoplasmic/endoplasmic | yes | N/A | 0.753 | 0.694 | 0.613 | 0.0 |
| >sp|Q7PPA5|ATC1_ANOGA Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=2 SV=5 | Back alignment and function desciption |
|---|
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/812 (75%), Positives = 657/812 (80%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKVIRGDKSGVQK+RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 105 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRL 164
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 165 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 224
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 225 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFNDPAHG 284
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 285 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 344
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIF+KIEG+DSSF EFEI+GSTYEPIG+V LNG +IK A
Sbjct: 345 SVICSDKTGTLTTNQMSVSRMFIFEKIEGNDSSFTEFEISGSTYEPIGEVTLNGQRIKAA 404
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHELGTICIMCNDSAIDFNE K+ FEKVGEATETALIVLAEKLNPFNV+K GL RR
Sbjct: 405 DYETLHELGTICIMCNDSAIDFNETKKVFEKVGEATETALIVLAEKLNPFNVAKQGLDRR 464
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPKLF KGAPEGVLER
Sbjct: 465 SSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGN-GPKLFCKGAPEGVLER 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT TLK RILDLTR YGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 524 CTHARVGSTKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATADSPMKPDDMDLNDSTKF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YEVNLTFVGVVGMLDPPRKEV DSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 584 YTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGE 643
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 644 DEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 703
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 764 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRKA 823
Query: 877 ---LLGPAIHYQVDLTGGPDQVYLSGLPDSIYYL------PTTVFA--THHMSCLGGGDE 925
L+ + ++ GG V + + + ++ P + THH+SCLGGG+E
Sbjct: 824 DEGLISGWLFFRYMAIGG--YVGCATVGGAAWWFMFSETGPQLSYWQLTHHLSCLGGGEE 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF+DPHPMTMALSVLVTIEMLNAMN
Sbjct: 882 FKGIDCKIFNDPHPMTMALSVLVTIEMLNAMN 913
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Anopheles gambiae (taxid: 7165) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila melanogaster GN=Ca-P60A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/812 (71%), Positives = 637/812 (78%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+R DKSG+QKVRAKEIVPGD+VEVSVGDKIPADIR+
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRI 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IYSTT+RIDQSILTGESVSVIKHTDA+PDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 166 THIYSTTLRIDQSILTGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGL+TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIFDK+EG+DSSFLEFE+TGSTYEPIG+VFLNG +IK A
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVFLNGQRIKAA 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DY+TL EL TICIMCNDSAID+NEFKQAFEKVGEATETALIVLAEKLN F+V+KSGL RR
Sbjct: 406 DYDTLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFSVNKSGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AIA R ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+S+LG+ GPKLFVKGAPEGVLER
Sbjct: 466 SAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGT-GPKLFVKGAPEGVLER 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+G+ K PLT+ LK +IL LT QYGTGRDTLRCL LA AD+P+KP++M+L DSTKF
Sbjct: 525 CTHARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGI------------------RVIVITG 750
YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGI R+ V
Sbjct: 585 YQYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAE 644
Query: 751 DNKATAEAICRR----------------------------------------IGVFTEEE 770
D T ++ R I T +
Sbjct: 645 DEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDG 704
Query: 771 DTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIV+AVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDISLL-GPAIHY 884
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+ ++ P
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRKA 824
Query: 885 QVDLTGGPDQVYLSGLPDSIYYLPTT--------VFA-----------THHMSCLGGGDE 925
L G ++ + Y T VF+ THH+SCLGGGDE
Sbjct: 825 DEGLISG--WLFFRYMAIGFYVGAATVGAAAWWFVFSDEGPKLSYWQLTHHLSCLGGGDE 882
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF DPH MTMALSVLVTIEMLNAMN
Sbjct: 883 FKGVDCKIFSDPHAMTMALSVLVTIEMLNAMN 914
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q292Q0|ATC1_DROPS Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila pseudoobscura pseudoobscura GN=Ca-P60A PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/819 (70%), Positives = 630/819 (76%), Gaps = 100/819 (12%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKVIR DKSG+QKVRAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVIRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IYSTTIRIDQSILTGESVSVIKHTDA+PDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 166 THIYSTTIRIDQSILTGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGL+TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRM IF+K+EG+DSSFLEFE+TGSTYEPIG++FL G ++K +
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMLIFEKVEGNDSSFLEFELTGSTYEPIGELFLGGQRVKAS 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYE L EL T+CIMCNDSAID+NEFK AFEKVGEATETALIVLAEKLN F+V+KSGL RR
Sbjct: 406 DYEALQELATVCIMCNDSAIDYNEFKAAFEKVGEATETALIVLAEKLNAFSVNKSGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AIA R ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+S+LG+ GPKLFVKGAPEGVL+R
Sbjct: 466 SNAIAARGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGT-GPKLFVKGAPEGVLDR 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+G+ K PLT+ LK +IL LT QYGTGRDTLRCL LA AD+P++PEDM+L DSTKF
Sbjct: 525 CTHARVGTSKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPIRPEDMDLGDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGI------------------RVIVITG 750
YEVNLTFVGVVGMLDPPRKEVFD+I RCRAAGI R+ V T
Sbjct: 585 YQYEVNLTFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICRRIGVFTE 644
Query: 751 DNKATAEAICRR----------------------------------------IGVFTEEE 770
+ T ++ R I T +
Sbjct: 645 EEDTTGKSYSGREFDDLSIAEQKAAVARSRLFSRVEPQHKSKIVEYLQGMNEISAMTGDG 704
Query: 771 DTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIV+AVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIKKISTTNRGKKKKLSYNFLDISLLGPAIHYQ---VD 887
ISSNIGEVVSIFLTAALGLPEALI + L N + L A+ + +D
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALI---------PVQLLWVNLVTDGLPATALGFNPPDLD 815
Query: 888 LTGGPDQVYLSGLPDSIYYL---------------------------PTTVFA--THHMS 918
+ P + GL + P + THH+S
Sbjct: 816 IMDKPPRKADEGLISGWLFFRYMAIGFYVGAATVGAAAWWFIASSEGPGLTYWQLTHHLS 875
Query: 919 CLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
CLGGGDEFKG+DC IF DP MTMALSVLVTIEMLNAMN
Sbjct: 876 CLGGGDEFKGVDCKIFSDPKAMTMALSVLVTIEMLNAMN 914
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila pseudoobscura pseudoobscura (taxid: 46245) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P35316|ATC_ARTSF Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Artemia franciscana PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/820 (66%), Positives = 625/820 (76%), Gaps = 101/820 (12%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V E+NAESAIEALKEYEPEMGKVIR DK+G+QK++A+++VPGDIVE+SVGDKIPAD+RL
Sbjct: 109 VWQEKNAESAIEALKEYEPEMGKVIRADKTGIQKIKARDLVPGDIVEISVGDKIPADLRL 168
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I I STT+RIDQSILTGESVSVIKHTD VPDPRAVNQDKKN+LFSGTNV+AGKARG+VMG
Sbjct: 169 ISILSTTLRIDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNVSAGKARGVVMG 228
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIG IRT+M ETEE+KTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 229 TGLNTAIGSIRTQMFETEEMKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 288
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 289 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 348
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKI-EGSDSSFLEFEITGSTYEPIGDVFLNGSKIKG 527
SVICSDKTGTLTTNQMSVSRMF+F I + + +FE+TGSTYEPIG+ F+ G KI
Sbjct: 349 SVICSDKTGTLTTNQMSVSRMFVFKDIPDDAAPELYQFELTGSTYEPIGETFMQGQKINA 408
Query: 528 ADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGR 587
ADY+ + E+ TIC+MCNDSAIDFNE+KQAFEKVGEATETALIVL EKLNP+N+SK+G R
Sbjct: 409 ADYDAVKEITTICMMCNDSAIDFNEYKQAFEKVGEATETALIVLGEKLNPYNLSKAGKDR 468
Query: 588 REQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLE 647
R A+ VR+D++T+WKKEFTLEFSRDRKSMSSYC PLK+ L S+GPK+FVKGAPEGVL+
Sbjct: 469 RSAALVVREDMDTRWKKEFTLEFSRDRKSMSSYCVPLKAGLL-SNGPKMFVKGAPEGVLD 527
Query: 648 RCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTK 707
RCTH R+G++K P+T + ++IL++TR YGTGRDTLRCL LAT D+P+ P+DM++ DSTK
Sbjct: 528 RCTHVRVGTKKVPMTPAIMDKILEVTRAYGTGRDTLRCLALATIDDPMDPKDMDIIDSTK 587
Query: 708 FASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767
F YE N TFVGVVGMLDPPRKEV D+I RCRAAGIRVIVITGDNKATAEAICRRIGVF
Sbjct: 588 FVKYEQNCTFVGVVGMLDPPRKEVLDAIERCRAAGIRVIVITGDNKATAEAICRRIGVFG 647
Query: 768 EEEDT-----TGKSYS-------------------------------------------- 778
E+E+T TG+ +
Sbjct: 648 EDENTEGMAYTGREFDDLSVEGQRDAVARSRLFARVEPFHKSKIVEYLQGMGEISAMTGD 707
Query: 779 ---------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRY 829
KAEIGIAMGSGTAVAKSA+EMVLADDNFS+IVAAVEEGRAIYNNMKQFIRY
Sbjct: 708 GVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRY 767
Query: 830 LISSNIGEVVSIFLTAALGLPEALIKKISTTNRGKKKKLSYNFLDISLLGPAIHYQ---V 886
LISSNIGEVVSIFLTAALGLPEALI + L N + L A+ + +
Sbjct: 768 LISSNIGEVVSIFLTAALGLPEALI---------PVQLLWVNLVTDGLPATALGFNPPDL 818
Query: 887 DLTGGPDQVYLSGLPDSIYYLPTTVFAT-----------------------------HHM 917
D+ P + GL + T HH+
Sbjct: 819 DIMNKPPRRADEGLITGWLFFRYMAIGTYVGAATVGAAAHWFMMSPTGPGLNFYQLSHHL 878
Query: 918 SCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
C + F+G+DC IF DPHPMTMALSVLVTIEMLNA+N
Sbjct: 879 QCTPENEYFEGIDCEIFSDPHPMTMALSVLVTIEMLNAIN 918
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Artemia franciscana (taxid: 6661) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Gallus gallus GN=ATP2A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/812 (61%), Positives = 582/812 (71%), Gaps = 87/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAE+AIEALKEYEPEMGKV R D+ VQ+++A++IVPGDIVEV+VGDK+PADIR+
Sbjct: 106 VWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKARDIVPGDIVEVAVGDKVPADIRI 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I STT+R+DQSILTGESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+
Sbjct: 166 TSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVIA 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG+NT IGKIR EM TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HG
Sbjct: 226 TGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV RMFI DK+EG S EF +TGSTY P+G+V + IK +
Sbjct: 346 SVICSDKTGTLTTNQMSVCRMFILDKVEGDSCSLNEFTVTGSTYAPMGEVHKDDKLIKCS 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
Y+ L EL TIC +CNDS++D+NE K +EKVGEATETAL L EK+N F+ GL R
Sbjct: 406 QYDGLVELATICALCNDSSLDYNEAKGVYEKVGEATETALTCLVEKMNVFDTDLKGLSRI 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A ++ KKEFTLEFSRDRKSMS YCTP K S+ +S K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSR--TSMSKMFVKGAPEGVIDR 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTH R+G+ K PL++ +K +I+ + R++GTGRDTLRCL LAT DNP + E+MNL DS+ F
Sbjct: 524 CTHVRVGNAKIPLSSGIKQKIMSVIREWGTGRDTLRCLALATHDNPPRKEEMNLEDSSNF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768
+YE NLTFVG VGMLDPPR EV SI C+ AGIRVI+ITGDNK TA AICRRIG+F E
Sbjct: 584 INYETNLTFVGCVGMLDPPRIEVASSIKLCKQAGIRVIMITGDNKGTAVAICRRIGIFVE 643
Query: 769 EEDT-----TGKSYS--------------------------------------------- 778
+ED TG+ +
Sbjct: 644 DEDVSTKAFTGREFDELSLAAQRDACHHARCFARVEPSHKSKIVEFLQSFDEITAMTGDG 703
Query: 779 --------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
KAEIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDISLLG-PAIHY 884
ISSN+GEVV IFLTAALG PEALI ++ G L +N D+ ++ P +
Sbjct: 764 ISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNP 823
Query: 885 QVDLTGGPDQVYLSGLPDSIYYL-----------------PTTVF--ATHHMSCLGGGDE 925
+ L G ++ L Y P F +H + C +
Sbjct: 824 KEPLISG--WLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVTFYQLSHFLQCKEDNPD 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
F G+DC +F P+PMTMALSVLVTIEM NA+N
Sbjct: 882 FSGVDCVVFESPYPMTMALSVLVTIEMCNALN 913
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P20647|AT2A2_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Oryctolagus cuniculus GN=ATP2A2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/812 (61%), Positives = 580/812 (71%), Gaps = 87/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAE+AIEALKEYEPEMGKV R D+ VQ+++AK+IVPGDIVE++VGDK+PADIRL
Sbjct: 106 VWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I STT+R+DQSILTGESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+
Sbjct: 166 TSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVA 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG+NT IGKIR EM TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HG
Sbjct: 226 TGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV RMFI DK++G S EF ITGSTY PIG+V + +K
Sbjct: 346 SVICSDKTGTLTTNQMSVCRMFILDKVDGDTCSLNEFTITGSTYAPIGEVHKDDKPVKCH 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
Y+ L EL TIC +CNDSA+D+NE K +EKVGEATETAL L EK+N F+ GL +
Sbjct: 406 QYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKI 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A ++ KKEFTLEFSRDRKSMS YCTP K S+ +S K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSR--TSMSKMFVKGAPEGVIDR 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTH R+GS K P+TA +K +I+ + R++G+G DTLRCL LAT DNPL+ E+M+L DS F
Sbjct: 524 CTHIRVGSTKVPMTAGVKQKIMSVIREWGSGSDTLRCLALATHDNPLRREEMHLKDSANF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768
YE NLTFVG VGMLDPPR EV S+ CR AGIRVI+ITGDNK TA AICRRIG+F +
Sbjct: 584 IKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQ 643
Query: 769 EEDT-----TGKSYS--------------------------------------------- 778
EED TG+ +
Sbjct: 644 EEDVTAKAFTGREFDELNPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDG 703
Query: 779 --------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
KAEIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDISLLG-PAIHY 884
ISSN+GEVV IFLTAALG PEALI ++ G L +N D+ ++ P +
Sbjct: 764 ISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNP 823
Query: 885 QVDLTGGPDQVYLSGLPDSIYYL-----------------PTTVF--ATHHMSCLGGGDE 925
+ L G ++ L Y P F +H + C +
Sbjct: 824 KEPLISG--WLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPD 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
F+G+DC IF P+PMTMALSVLVTIEM NA+N
Sbjct: 882 FEGVDCAIFESPYPMTMALSVLVTIEMCNALN 913
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Oryctolagus cuniculus (taxid: 9986) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P13585|AT2A1_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Gallus gallus GN=ATP2A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/815 (61%), Positives = 579/815 (71%), Gaps = 92/815 (11%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAE+AIEALKEYEPEMGKV R D+ VQ+++A+++VPGDI EV+VGDK+PADIR+
Sbjct: 106 VWQERNAENAIEALKEYEPEMGKVYRADRKAVQRIKARDLVPGDIAEVAVGDKVPADIRI 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I I STT+R+DQSILTGESVSVIKHT+ VPDPRAVNQDKKN+LFSGTN+ AGKA GIV+
Sbjct: 166 ISIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIGAGKAVGIVVA 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG+NT IGKIR EM+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HG
Sbjct: 226 TGVNTEIGKIRDEMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV +MFI DK+EG S EF ITGSTY P GDV N IK
Sbjct: 346 SVICSDKTGTLTTNQMSVCKMFIVDKVEGDVCSLNEFSITGSTYAPEGDVLKNEKHIKAG 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
++ L EL TIC +CNDS++D+NE K +EKVGEATETAL L EK+N FN L +
Sbjct: 406 QHDGLVELATICALCNDSSLDYNEAKGIYEKVGEATETALTCLVEKMNVFNTDVRSLSKV 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A ++ KKEFTLEFSRDRKSMS YC+P K+S+ + G K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASR-AAVGNKMFVKGAPEGVIDR 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
C + R+G+ + PLT +K +IL + +++GTGRDTLRCL LAT D P K EDM L DSTKF
Sbjct: 525 CNYVRVGTTRVPLTPAVKEKILAVIKEWGTGRDTLRCLALATRDTPPKMEDMMLVDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768
A YE +LTFVG VGMLDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+FTE
Sbjct: 585 AEYETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICRRIGIFTE 644
Query: 769 EEDT-----TGKSYS--------------------------------------------- 778
+E+ TG+ +
Sbjct: 645 DEEVSGRAYTGREFDDLPPAEQREACRRACCFARVEPTHKSKIVEFLQSFDEITAMTGDG 704
Query: 779 --------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
KAEIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSN+GEVV IFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRSP 824
Query: 877 ---LLGPAIHYQVDLTGGPDQ-----------VYLSGLPDSIYYLPTTVFATHHMSCLGG 922
L+ + ++ GG +Y P Y+ TH M C
Sbjct: 825 KEPLISGWLFFRYLAIGGYVGAATVGAAAWWFLYAEDGPSLTYHQ-----LTHFMQCTHH 879
Query: 923 GDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
EF+G+DC IF P PMTMALSVLVTIEM NA+N
Sbjct: 880 NAEFEGVDCDIFESPVPMTMALSVLVTIEMCNALN 914
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P11607|AT2A2_PIG Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Sus scrofa GN=ATP2A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/812 (61%), Positives = 579/812 (71%), Gaps = 87/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAE+AIEALKEYEPEMGKV R D+ VQ+++AK+IVPGDIVE++VGDK+PADIRL
Sbjct: 106 VWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I STT+R+DQSILTGESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+
Sbjct: 166 TSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVA 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG+NT IGKIR EM TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HG
Sbjct: 226 TGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV RMFI DK+EG S EF ITGSTY PIG+V + +K
Sbjct: 346 SVICSDKTGTLTTNQMSVCRMFILDKVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVKCH 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
Y+ L EL TIC +CNDSA+D+NE K +EKVGEATETAL L EK+N F+ GL +
Sbjct: 406 QYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKI 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A ++ KKEFTLEFSRDRKSMS YCTP K S+ +S K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSR--TSMSKMFVKGAPEGVIDR 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTH R+GS K P+T +K +I+ + R++G+G DTLRCL LAT DNP++ E+MNL DS F
Sbjct: 524 CTHIRVGSTKVPMTPGVKQKIMSVIREWGSGSDTLRCLALATHDNPMRREEMNLEDSANF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768
YE NLTFVG VGMLDPPR EV S+ CR AGIRVI+ITGDNK TA AICRRIG+F +
Sbjct: 584 IKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQ 643
Query: 769 EEDT-----TGKSYS--------------------------------------------- 778
+ED TG+ +
Sbjct: 644 DEDVTSKAFTGREFDELNPSAQREACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDG 703
Query: 779 --------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
K+EIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKSEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDISLLG-PAIHY 884
ISSN+GEVV IFLTAALG PEALI ++ G L +N D+ ++ P +
Sbjct: 764 ISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNP 823
Query: 885 QVDLTGGPDQVYLSGLPDSIYYL-----------------PTTVF--ATHHMSCLGGGDE 925
+ L G ++ L Y P F +H + C +
Sbjct: 824 KEPLISG--WLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVTFYQLSHFLQCKEDNPD 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
F+G+DC +F P+PMTMALSVLVTIEM NA+N
Sbjct: 882 FEGVDCAVFESPYPMTMALSVLVTIEMCNALN 913
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O46674|AT2A2_CANFA Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Canis familiaris GN=ATP2A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/812 (61%), Positives = 579/812 (71%), Gaps = 87/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAE+AIEALKEYEPEMGKV R D+ VQ+++AK+IVPGDIVE++VGDK+PADIRL
Sbjct: 106 VWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I STT+R+DQSILTGESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+
Sbjct: 166 TSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVA 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG+NT IGKIR EM TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HG
Sbjct: 226 TGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV RMFI D++EG S EF ITGSTY PIG+V + +K
Sbjct: 346 SVICSDKTGTLTTNQMSVCRMFILDRVEGDSCSLNEFTITGSTYAPIGEVHKDDKPVKCH 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
Y+ L EL TIC +CNDSA+D+NE K +EKVGEATETAL L EK+N F+ GL +
Sbjct: 406 QYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKI 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A ++ KKEFTLEFSRDRKSMS YCTP K S+ +S K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSR--TSMSKMFVKGAPEGVIDR 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTH R+GS K P+T +K +++ + R++G+G DTLRCL LAT DNPL+ E+MNL DS F
Sbjct: 524 CTHIRVGSTKVPMTPGVKQKVMSVIREWGSGSDTLRCLALATHDNPLRREEMNLEDSANF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768
YE NLTFVG VGMLDPPR EV S+ CR AGIRVI+ITGDNK TA AICRRIG+F +
Sbjct: 584 IKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQ 643
Query: 769 EEDT-----TGKSYS--------------------------------------------- 778
+ED TG+ +
Sbjct: 644 DEDVTSKAFTGREFDELSPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDG 703
Query: 779 --------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
K+EIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKSEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDISLLG-PAIHY 884
ISSN+GEVV IFLTAALG PEALI ++ G L +N D+ ++ P +
Sbjct: 764 ISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNP 823
Query: 885 QVDLTGGPDQVYLSGLPDSIYYL-----------------PTTVF--ATHHMSCLGGGDE 925
+ L G ++ L Y P F +H + C +
Sbjct: 824 KEPLISG--WLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKDDNPD 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
F+G+DC IF P+PMTMALSVLVTIEM NA+N
Sbjct: 882 FEGVDCAIFESPYPMTMALSVLVTIEMCNALN 913
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Canis familiaris (taxid: 9615) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O55143|AT2A2_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Mus musculus GN=Atp2a2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/812 (61%), Positives = 578/812 (71%), Gaps = 87/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAE+AIEALKEYEPEMGKV R D+ VQ+++AK+IVPGDIVE++VGDK+PADIRL
Sbjct: 106 VWQERNAENAIEALKEYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I STT+R+DQSILTGESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+
Sbjct: 166 TSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVA 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG+NT IGKIR EM TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HG
Sbjct: 226 TGVNTEIGKIRDEMVATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV RMFI DK+EG S EF ITGSTY PIG+V + +K
Sbjct: 346 SVICSDKTGTLTTNQMSVCRMFILDKVEGDTCSLNEFSITGSTYAPIGEVQKDDKPVKCH 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
Y+ L EL TIC +CNDSA+D+NE K +EKVGEATETAL L EK+N F+ GL +
Sbjct: 406 QYDGLVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKI 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A ++ KKEFTLEFSRDRKSMS YCTP K S+ +S K+FVKGAPEGV++R
Sbjct: 466 ERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPNKPSR--TSMSKMFVKGAPEGVIDR 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTH R+GS K P+T +K +I+ + R++G+G DTLRCL LAT DNPLK E+M+L DS F
Sbjct: 524 CTHIRVGSTKVPMTPGVKQKIMSVIREWGSGSDTLRCLALATHDNPLKREEMHLEDSANF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768
YE NLTFVG VGMLDPPR EV S+ CR AGIRVI+ITGDNK TA AICRRIG+F +
Sbjct: 584 IKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQ 643
Query: 769 EEDT-----TGKSYS--------------------------------------------- 778
+ED TG+ +
Sbjct: 644 DEDVTSKAFTGREFDELSPSAQRDACLNARCFARVEPSHKSKIVEFLQSFDEITAMTGDG 703
Query: 779 --------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
K+EIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKSEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDISLLG-PAIHY 884
ISSN+GEVV IFLTAALG PEALI ++ G L +N D+ ++ P +
Sbjct: 764 ISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRNP 823
Query: 885 QVDLTGGPDQVYLSGLPDSIYYL-----------------PTTVF--ATHHMSCLGGGDE 925
+ L G ++ L Y P F +H + C +
Sbjct: 824 KEPLISG--WLFFRYLAIGCYVGAATVGAAAWWFIAADGGPRVSFYQLSHFLQCKEDNPD 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
F G+DC IF P+PMTMALSVLVTIEM NA+N
Sbjct: 882 FDGVDCAIFESPYPMTMALSVLVTIEMCNALN 913
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 962 | ||||||
| 4191598 | 1000 | sarco(endo)plasmic reticulum-type calciu | 0.754 | 0.726 | 0.75 | 0.0 | |
| 345493530 | 1002 | PREDICTED: calcium-transporting ATPase s | 0.751 | 0.721 | 0.742 | 0.0 | |
| 383863382 | 1003 | PREDICTED: calcium-transporting ATPase s | 0.751 | 0.720 | 0.748 | 0.0 | |
| 158295517 | 1001 | AGAP006186-PB [Anopheles gambiae str. PE | 0.754 | 0.725 | 0.754 | 0.0 | |
| 312373552 | 1192 | hypothetical protein AND_17267 [Anophele | 0.750 | 0.605 | 0.746 | 0.0 | |
| 350403500 | 1002 | PREDICTED: calcium-transporting ATPase s | 0.751 | 0.721 | 0.748 | 0.0 | |
| 158295519 | 998 | AGAP006186-PA [Anopheles gambiae str. PE | 0.754 | 0.727 | 0.754 | 0.0 | |
| 340722942 | 1002 | PREDICTED: calcium-transporting ATPase s | 0.751 | 0.721 | 0.747 | 0.0 | |
| 357615523 | 1025 | sarco/endoplasmic reticulum calcium ATPa | 0.754 | 0.708 | 0.742 | 0.0 | |
| 158295513 | 1018 | AGAP006186-PE [Anopheles gambiae str. PE | 0.754 | 0.713 | 0.754 | 0.0 |
| >gi|4191598|gb|AAD09820.1| sarco(endo)plasmic reticulum-type calcium ATPase [Heliothis virescens] | Back alignment and taxonomy information |
|---|
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/812 (75%), Positives = 656/812 (80%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKVIRGDKSGVQK+RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTD +PDPRAVNQDKKNILFSGTNVAAGKARGIV+G
Sbjct: 166 IKIYSTTIRIDQSILTGESVSVIKHTDPIPDPRAVNQDKKNILFSGTNVAAGKARGIVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIF+KIEG DSSFLEFEITGSTYEPIGDV+L G KIK A
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFIFEKIEGGDSSFLEFEITGSTYEPIGDVYLKGQKIKAA 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
+++ LHELGTIC+MCNDSAIDFNEFKQAFEKVGEATETALIVLAEK+NPFNV K+GL RR
Sbjct: 406 EFDALHELGTICVMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKMNPFNVPKTGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ++ETKWKKEFTLEFSRDRKSMS+YCTPLK S+LG+ GPKLFVKGAPEGVLER
Sbjct: 466 SCAIVVRQEIETKWKKEFTLEFSRDRKSMSTYCTPLKPSRLGN-GPKLFVKGAPEGVLER 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+G+ K PL +TLKNRILDLTRQYGTGRDTLRCL LATAD+PLKP++M+L DSTKF
Sbjct: 525 CTHARVGTAKVPLNSTLKNRILDLTRQYGTGRDTLRCLALATADSPLKPDEMDLGDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAE----------- 757
+YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNKATAE
Sbjct: 585 YTYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFTE 644
Query: 758 -----------------------AICRRIGVFTEEEDT------------------TGK- 775
A C + +F+ E TG
Sbjct: 645 EEDTTGKSFSGREFDDLPVSEQRAACAKARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 704
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKA 824
Query: 877 ---LLGPAIHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFA--------THHMSCLGGGDE 925
L+ + ++ GG V + + + ++ + F THH+ CL GGDE
Sbjct: 825 DEGLISGWLFFRYMAIGG--YVGAATVGAASWWFMYSPFGPQMSYWQLTHHLQCLSGGDE 882
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF DPHPMTMALSVLVTIEMLNAMN
Sbjct: 883 FKGIDCKIFTDPHPMTMALSVLVTIEMLNAMN 914
|
Source: Heliothis virescens Species: Heliothis virescens Genus: Heliothis Family: Noctuidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345493530|ref|XP_001603571.2| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/815 (74%), Positives = 658/815 (80%), Gaps = 92/815 (11%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+RGDKSGVQ++RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVVRGDKSGVQRIRAKEIVPGDVVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
KIYSTT+RIDQSILTGESVSVIKHTD VPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 166 TKIYSTTLRIDQSILTGESVSVIKHTDPVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMF+F++IEG+DS+F EFEITGSTYEPIGDV+L G K+KG+
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFVFERIEGNDSAFNEFEITGSTYEPIGDVYLKGQKVKGS 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
+YETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEK+NPF V+K+GL RR
Sbjct: 406 EYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKVNPFGVNKTGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQD+ETKWKKEFTLEFSRDRKSMSSYC PLK +KLG+ GPKLFVKGAPEGVL+R
Sbjct: 466 SSAIVVRQDIETKWKKEFTLEFSRDRKSMSSYCVPLKPTKLGT-GPKLFVKGAPEGVLDR 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GSQKFPLT+TLKNRIL+LTRQYGTGRDTLRCL LATAD+P+KPEDM+L DS KF
Sbjct: 525 CTHARVGSQKFPLTSTLKNRILELTRQYGTGRDTLRCLALATADHPMKPEDMDLGDSNKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YE LTF+GVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 585 FTYEKELTFIGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFTE 644
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 645 DEDTTGKSYSGREFDDLSIPEQRAACARARLFSRVEPAHKSKIVEYLQSMNEISAMTGDG 704
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDI---------- 875
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMQKPPRKA 824
Query: 876 --SLLGPAIHYQVDLTGGPDQ-----------VYLSGLPDSIYYLPTTVFATHHMSCLGG 922
SL+ + ++ GG +Y P YY THH++C+GG
Sbjct: 825 DESLISGWLFFRYLAIGGYVGAATVGSAAWWFLYSPNGPQLNYYQ-----LTHHLACIGG 879
Query: 923 GDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
G+EFKG+DC +F+DPHPMTMALSVLVTIEMLNAMN
Sbjct: 880 GEEFKGVDCKVFNDPHPMTMALSVLVTIEMLNAMN 914
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383863382|ref|XP_003707160.1| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/815 (74%), Positives = 657/815 (80%), Gaps = 92/815 (11%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+R DK+GVQ++RAKEIVPGDIVEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVLRTDKAGVQRIRAKEIVPGDIVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
KIYSTT+RIDQSILTGESVSVIKHTD VPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 166 TKIYSTTLRIDQSILTGESVSVIKHTDPVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIFDK+EG+DSSF EFEITGSTYEPIGD+FL G KI+G
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFHEFEITGSTYEPIGDLFLRGQKIRGQ 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHE+ TICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEK+NP+ VSKSGL RR
Sbjct: 406 DYETLHEISTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKINPYGVSKSGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AIAVRQD+ETKWKKEFTLEFSRDRKSMSSYCTPL+ SKLG+ GPKLFVKGAPEGVL+R
Sbjct: 466 NAAIAVRQDMETKWKKEFTLEFSRDRKSMSSYCTPLRPSKLGN-GPKLFVKGAPEGVLDR 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT+TLKNRILDLTRQYGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 525 CTHARVGSTKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADHPMKPDDMDLGDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI
Sbjct: 585 YTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFGE 644
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 645 DEDTTGKSYSGREFDDLAPMEQKAACARARLFSRVEPAHKSKIVEYLQSMNEISAMTGDG 704
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDI---------- 875
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMSKPPRKA 824
Query: 876 --SLLGPAIHYQVDLTGGPDQ-----------VYLSGLPDSIYYLPTTVFATHHMSCLGG 922
SL+ + ++ GG +Y P YY THH++C+GG
Sbjct: 825 DESLISGWLFFRYLAIGGYVGAATVGSAAWWFLYSPNGPQMNYYQ-----LTHHLACMGG 879
Query: 923 GDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
G+EFKG++C IF DPHPMTMALSVLVTIEMLNAMN
Sbjct: 880 GEEFKGINCKIFTDPHPMTMALSVLVTIEMLNAMN 914
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158295517|ref|XP_001688816.1| AGAP006186-PB [Anopheles gambiae str. PEST] gi|157016076|gb|EDO63822.1| AGAP006186-PB [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/812 (75%), Positives = 657/812 (80%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKVIRGDKSGVQK+RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 105 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRL 164
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 165 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 224
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 225 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFNDPAHG 284
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 285 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 344
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIF+KIEG+DSSF EFEI+GSTYEPIG+V LNG +IK A
Sbjct: 345 SVICSDKTGTLTTNQMSVSRMFIFEKIEGNDSSFTEFEISGSTYEPIGEVTLNGQRIKAA 404
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHELGTICIMCNDSAIDFNE K+ FEKVGEATETALIVLAEKLNPFNV+K GL RR
Sbjct: 405 DYETLHELGTICIMCNDSAIDFNETKKVFEKVGEATETALIVLAEKLNPFNVAKQGLDRR 464
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPKLF KGAPEGVLER
Sbjct: 465 SSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGN-GPKLFCKGAPEGVLER 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT TLK RILDLTR YGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 524 CTHARVGSTKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATADSPMKPDDMDLNDSTKF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YEVNLTFVGVVGMLDPPRKEV DSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 584 YTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGE 643
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 644 DEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 703
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 764 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRKA 823
Query: 877 ---LLGPAIHYQVDLTGGPDQVYLSGLPDSIYYL------PTTVFA--THHMSCLGGGDE 925
L+ + ++ GG V + + + ++ P + THH+SCLGGG+E
Sbjct: 824 DEGLISGWLFFRYMAIGG--YVGCATVGGAAWWFMFSETGPQLSYWQLTHHLSCLGGGEE 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF+DPHPMTMALSVLVTIEMLNAMN
Sbjct: 882 FKGIDCKIFNDPHPMTMALSVLVTIEMLNAMN 913
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312373552|gb|EFR21267.1| hypothetical protein AND_17267 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/816 (74%), Positives = 652/816 (79%), Gaps = 94/816 (11%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+RGDKSGVQK+RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 208 VWQERNAESAIEALKEYEPEMGKVVRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRL 267
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTD+VPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 268 IKIYSTTIRIDQSILTGESVSVIKHTDSVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 327
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 328 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFNDPAHG 387
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 388 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 447
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIFDK+EG+DSSF EFEI+GSTYEPIG+V LNG +IK +
Sbjct: 448 SVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFTEFEISGSTYEPIGEVTLNGQRIKAS 507
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHELGTICIMCNDSAIDFNE K+ FEKVGEATETALIVLAEKLNPFNV+K GL RR
Sbjct: 508 DYETLHELGTICIMCNDSAIDFNEVKKVFEKVGEATETALIVLAEKLNPFNVAKQGLDRR 567
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ++ETKWKKEFTLEFSRDRKSMS+YCTPLK+SKLG+ GPKLF KGAPEGVLER
Sbjct: 568 SSAICVRQEIETKWKKEFTLEFSRDRKSMSTYCTPLKASKLGN-GPKLFCKGAPEGVLER 626
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+G+ K PLTATLK RILDLTRQYGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 627 CTHARVGTSKVPLTATLKQRILDLTRQYGTGRDTLRCLALATADSPMKPDDMDLNDSTKF 686
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YEVNLTFVGVVGMLDPPRKEV DSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 687 YTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGE 746
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 747 DEDTTGKSYSGREFDDLSVSDQRDACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 806
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 807 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 866
Query: 831 ISSNIGEVVSIFLTAALGLPEALIKK--------------------------ISTTNRGK 864
ISSNIGEVVSIFLTAALGLPEALI +S R
Sbjct: 867 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMSKPPRKA 926
Query: 865 KKKLSYNFLDISLLGPAIHYQVDLTGGPDQVYL---SGLPDSIYYLPTTVFATHHMSCLG 921
+ L +L + + GG ++ SG S + L THH+SCLG
Sbjct: 927 DEGLISGWLFFRYMAIGGYVGCATVGGAAWWFMYSDSGPQLSYWQL------THHLSCLG 980
Query: 922 GGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
GG+ F G+DC IF+DPHPMTMALSVLVTIEMLNAMN
Sbjct: 981 GGEGFTGVDCKIFNDPHPMTMALSVLVTIEMLNAMN 1016
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350403500|ref|XP_003486819.1| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/815 (74%), Positives = 657/815 (80%), Gaps = 92/815 (11%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+R DK+GVQ++RAKEIVPGDIVEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVLRMDKAGVQRIRAKEIVPGDIVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
KI+STT+RIDQSILTGESVSVIKHTD VPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 166 TKIFSTTLRIDQSILTGESVSVIKHTDPVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIFDKIEG+DSSF EFEITGSTYEP+G++FL G KI+G
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFIFDKIEGNDSSFHEFEITGSTYEPVGEIFLRGKKIRGQ 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHE+GTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEK+NP+ VSKSGL RR
Sbjct: 406 DYETLHEVGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKINPYGVSKSGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AIA RQD+ETKWKKEFTLEFSRDRKSMSSYCTPLK +KLG+ GPKLFVKGAPEGVL+R
Sbjct: 466 NTAIAARQDMETKWKKEFTLEFSRDRKSMSSYCTPLKPTKLGT-GPKLFVKGAPEGVLDR 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT+TLKNRILDLTRQYGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 525 CTHARVGSTKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADHPMKPDDMDLDDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI
Sbjct: 585 YTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFGE 644
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 645 DEDTTGKSYSGREFDDLPSSEQKAACARARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 704
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDI---------- 875
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMSKPPRKA 824
Query: 876 --SLLGPAIHYQVDLTGGPDQ-----------VYLSGLPDSIYYLPTTVFATHHMSCLGG 922
SL+ + ++ GG +Y P YY THH++CLGG
Sbjct: 825 DESLISGWLFFRYMAIGGYVGAATVGSAAWWFMYSPHGPQMSYYQ-----LTHHLACLGG 879
Query: 923 GDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
GDEFKG++C IF DPHPMTMALSVLVTIEMLNAMN
Sbjct: 880 GDEFKGVNCKIFTDPHPMTMALSVLVTIEMLNAMN 914
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158295519|ref|XP_001688817.1| AGAP006186-PA [Anopheles gambiae str. PEST] gi|157016077|gb|EDO63823.1| AGAP006186-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 1162 bits (3006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/812 (75%), Positives = 657/812 (80%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKVIRGDKSGVQK+RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 105 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRL 164
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 165 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 224
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 225 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFNDPAHG 284
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 285 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 344
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIF+KIEG+DSSF EFEI+GSTYEPIG+V LNG +IK A
Sbjct: 345 SVICSDKTGTLTTNQMSVSRMFIFEKIEGNDSSFTEFEISGSTYEPIGEVTLNGQRIKAA 404
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHELGTICIMCNDSAIDFNE K+ FEKVGEATETALIVLAEKLNPFNV+K GL RR
Sbjct: 405 DYETLHELGTICIMCNDSAIDFNETKKVFEKVGEATETALIVLAEKLNPFNVAKQGLDRR 464
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPKLF KGAPEGVLER
Sbjct: 465 SSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGN-GPKLFCKGAPEGVLER 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT TLK RILDLTR YGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 524 CTHARVGSTKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATADSPMKPDDMDLNDSTKF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YEVNLTFVGVVGMLDPPRKEV DSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 584 YTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGE 643
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 644 DEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 703
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 764 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRKA 823
Query: 877 ---LLGPAIHYQVDLTGGPDQVYLSGLPDSIYYL------PTTVFA--THHMSCLGGGDE 925
L+ + ++ GG V + + + ++ P + THH+SCLGGG+E
Sbjct: 824 DEGLISGWLFFRYMAIGG--YVGCATVGGAAWWFMFSETGPQLSYWQLTHHLSCLGGGEE 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF+DPHPMTMALSVLVTIEMLNAMN
Sbjct: 882 FKGIDCKIFNDPHPMTMALSVLVTIEMLNAMN 913
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340722942|ref|XP_003399858.1| PREDICTED: calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 1161 bits (3004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/815 (74%), Positives = 656/815 (80%), Gaps = 92/815 (11%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+R DK+GVQ++RAKEIVPGDIVEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVLRMDKAGVQRIRAKEIVPGDIVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
KI+STT+RIDQSILTGESVSVIKHTD VPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 166 TKIFSTTLRIDQSILTGESVSVIKHTDPVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIFDKIEG+DSSF EFEITGSTYEP+G++FL G KI+G
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFIFDKIEGNDSSFHEFEITGSTYEPVGEIFLRGKKIRGQ 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHE+GTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEK+NP+ VSKSGL RR
Sbjct: 406 DYETLHEVGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKINPYGVSKSGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI RQD+ETKWKKEFTLEFSRDRKSMSSYCTPLK +KLG+ GPKLFVKGAPEGVL+R
Sbjct: 466 NTAIVARQDMETKWKKEFTLEFSRDRKSMSSYCTPLKPTKLGT-GPKLFVKGAPEGVLDR 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT+TLKNRILDLTRQYGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 525 CTHARVGSTKVPLTSTLKNRILDLTRQYGTGRDTLRCLALATADHPMKPDDMDLDDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YE +LTF+GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI
Sbjct: 585 YTYEKDLTFIGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFGE 644
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 645 DEDTTGKSYSGREFDDLPSSEQKAACARARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 704
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDI---------- 875
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMSKPPRKA 824
Query: 876 --SLLGPAIHYQVDLTGGPDQ-----------VYLSGLPDSIYYLPTTVFATHHMSCLGG 922
SL+ + ++ GG +Y P YY THH++CLGG
Sbjct: 825 DESLISGWLFFRYMAIGGYVGAATVGSAAWWFMYSPHGPQMSYYQ-----LTHHLACLGG 879
Query: 923 GDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
GDEFKG++C IF DPHPMTMALSVLVTIEMLNAMN
Sbjct: 880 GDEFKGVNCKIFTDPHPMTMALSVLVTIEMLNAMN 914
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357615523|gb|EHJ69709.1| sarco/endoplasmic reticulum calcium ATPase [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/812 (74%), Positives = 657/812 (80%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKV+RGDKSGVQK+RAKEIVPGDIVEVSVGDKIPADIRL
Sbjct: 106 VWQERNAESAIEALKEYEPEMGKVVRGDKSGVQKIRAKEIVPGDIVEVSVGDKIPADIRL 165
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTDA+PDPRAVNQDKKNILFSGTNVAAGKARGIV+G
Sbjct: 166 IKIYSTTIRIDQSILTGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGIVIG 225
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 226 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHG 285
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 286 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 345
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIF+K+EG DSSFLEFEITGSTYEPIGDV+L G K+K +
Sbjct: 346 SVICSDKTGTLTTNQMSVSRMFIFEKVEGGDSSFLEFEITGSTYEPIGDVYLKGQKVKAS 405
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
+++ LHELGTIC+MCNDSAIDFNEFKQAFEKVGEATETALIVLAEK+NPFNV K+GL RR
Sbjct: 406 EFDALHELGTICVMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKMNPFNVPKTGLDRR 465
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ+VETKWKKEFTLEFSRDRKSMS+YCTPLK S+LG+ GPKLFVKGAPEGVLER
Sbjct: 466 SSAIVVRQEVETKWKKEFTLEFSRDRKSMSTYCTPLKPSRLGN-GPKLFVKGAPEGVLER 524
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+G+ K PL++TLKNRIL+LTR YGTGRDTLRCL LATADNP+KP++M+L DSTKF
Sbjct: 525 CTHARVGTAKVPLSSTLKNRILELTRSYGTGRDTLRCLALATADNPMKPDEMDLGDSTKF 584
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YEVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 585 YTYEVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFKE 644
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 645 DEDTTGKSYSGREFDDLPVAEQRQACARARLFSRVEPAHKSKIVEYLQSMNEISAMTGDG 704
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 705 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 764
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 765 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKA 824
Query: 877 ---LLGPAIHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFA--------THHMSCLGGGDE 925
L+ + ++ GG V ++ + + ++ + F THH+ C+ ++
Sbjct: 825 DEGLISGWLFFRYMAIGG--YVGMATVGAASWWFMYSPFGPQMTYWQLTHHLQCINSPED 882
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF DPHPMTMALSVLVTIEMLNAMN
Sbjct: 883 FKGIDCKIFTDPHPMTMALSVLVTIEMLNAMN 914
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|158295513|ref|XP_316251.4| AGAP006186-PE [Anopheles gambiae str. PEST] gi|158295515|ref|XP_001688815.1| AGAP006186-PC [Anopheles gambiae str. PEST] gi|158295521|ref|XP_001688818.1| AGAP006186-PD [Anopheles gambiae str. PEST] gi|166215094|sp|Q7PPA5.5|ATC1_ANOGA RecName: Full=Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type; AltName: Full=Calcium pump gi|157016074|gb|EAA10790.5| AGAP006186-PE [Anopheles gambiae str. PEST] gi|157016075|gb|EDO63821.1| AGAP006186-PC [Anopheles gambiae str. PEST] gi|157016078|gb|EDO63824.1| AGAP006186-PD [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 1160 bits (3002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/812 (75%), Positives = 657/812 (80%), Gaps = 86/812 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
V ERNAESAIEALKEYEPEMGKVIRGDKSGVQK+RAKEIVPGD+VEVSVGDKIPADIRL
Sbjct: 105 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRL 164
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARG+V+G
Sbjct: 165 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGVVIG 224
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHG
Sbjct: 225 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFNDPAHG 284
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 285 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 344
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSVSRMFIF+KIEG+DSSF EFEI+GSTYEPIG+V LNG +IK A
Sbjct: 345 SVICSDKTGTLTTNQMSVSRMFIFEKIEGNDSSFTEFEISGSTYEPIGEVTLNGQRIKAA 404
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
DYETLHELGTICIMCNDSAIDFNE K+ FEKVGEATETALIVLAEKLNPFNV+K GL RR
Sbjct: 405 DYETLHELGTICIMCNDSAIDFNETKKVFEKVGEATETALIVLAEKLNPFNVAKQGLDRR 464
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
AI VRQ++ETKWKKEFTLEFSRDRKSMSSYCTPLK+SKLG+ GPKLF KGAPEGVLER
Sbjct: 465 SSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGN-GPKLFCKGAPEGVLER 523
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
CTHAR+GS K PLT TLK RILDLTR YGTGRDTLRCL LATAD+P+KP+DM+L DSTKF
Sbjct: 524 CTHARVGSTKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATADSPMKPDDMDLNDSTKF 583
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI--------- 759
+YEVNLTFVGVVGMLDPPRKEV DSI RCRAAGIRVIVITGDNKATAEAI
Sbjct: 584 YTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFGE 643
Query: 760 -------------------------CRRIGVFTEEEDT------------------TGK- 775
C R +F+ E TG
Sbjct: 644 DEDTTGKSYSGREFDDLSVSEQREACSRARLFSRVEPAHKSKIVEFLQSMNEISAMTGDG 703
Query: 776 -----SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 830
+ KAEIGIAMGSGTAVAKSA+EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL
Sbjct: 704 VNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYL 763
Query: 831 ISSNIGEVVSIFLTAALGLPEALIK----KISTTNRG-KKKKLSYNFLDIS--------- 876
ISSNIGEVVSIFLTAALGLPEALI ++ G L +N D+
Sbjct: 764 ISSNIGEVVSIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMTKPPRKA 823
Query: 877 ---LLGPAIHYQVDLTGGPDQVYLSGLPDSIYYL------PTTVFA--THHMSCLGGGDE 925
L+ + ++ GG V + + + ++ P + THH+SCLGGG+E
Sbjct: 824 DEGLISGWLFFRYMAIGG--YVGCATVGGAAWWFMFSETGPQLSYWQLTHHLSCLGGGEE 881
Query: 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
FKG+DC IF+DPHPMTMALSVLVTIEMLNAMN
Sbjct: 882 FKGIDCKIFNDPHPMTMALSVLVTIEMLNAMN 913
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 962 | ||||||
| FB|FBgn0263006 | 1020 | Ca-P60A "Calcium ATPase at 60A | 0.570 | 0.538 | 0.865 | 1.2e-309 | |
| UNIPROTKB|Q292Q0 | 1002 | Ca-P60A "Calcium-transporting | 0.584 | 0.560 | 0.843 | 4e-307 | |
| WB|WBGene00004736 | 1059 | sca-1 [Caenorhabditis elegans | 0.567 | 0.515 | 0.740 | 1.2e-260 | |
| UNIPROTKB|F1MPR3 | 1015 | ATP2A2 "Uncharacterized protei | 0.495 | 0.469 | 0.688 | 6.7e-260 | |
| UNIPROTKB|H7C5W9 | 933 | ATP2A2 "Sarcoplasmic/endoplasm | 0.495 | 0.511 | 0.684 | 3.7e-257 | |
| UNIPROTKB|P13585 | 994 | ATP2A1 "Sarcoplasmic/endoplasm | 0.570 | 0.552 | 0.701 | 1.1e-256 | |
| UNIPROTKB|Q92105 | 994 | ATP2A1 "Sarcoplasmic/endoplasm | 0.570 | 0.552 | 0.701 | 1.8e-254 | |
| UNIPROTKB|Q9DDB9 | 994 | atp2A1 "Ca2+-ATPase 1" [Rana c | 0.570 | 0.552 | 0.714 | 2.1e-254 | |
| UNIPROTKB|Q9DDB8 | 994 | atp2A1 "Ca2+-ATPase" [Rana syl | 0.570 | 0.552 | 0.710 | 2.4e-253 | |
| UNIPROTKB|F1RFH9 | 993 | ATP2A1 "Uncharacterized protei | 0.569 | 0.551 | 0.694 | 4.2e-253 |
| FB|FBgn0263006 Ca-P60A "Calcium ATPase at 60A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 2444 (865.4 bits), Expect = 1.2e-309, Sum P(3) = 1.2e-309
Identities = 476/550 (86%), Positives = 508/550 (92%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAESAIEALKEYEPEMGKV+R DKSG+QKVRAKEIVPGD+VEVSVGDKIPADIR+ I
Sbjct: 109 ERNAESAIEALKEYEPEMGKVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
YSTT+RIDQSILTGESVSVIKHTDA+PDPRAVNQDKKNILFSGTNVAAGKARG+V+GTGL
Sbjct: 169 YSTTLRIDQSILTGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGL 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
+TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHGGSW
Sbjct: 229 STAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
IKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSVSRMFIFDK+EG+DSSFLEFE+TGSTYEPIG+VFLNG +IK ADY+
Sbjct: 349 CSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVFLNGQRIKAADYD 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
TL EL TICIMCNDSAID+NEFKQAFEKVGEATETALIVLAEKLN F+V+KSGL RR A
Sbjct: 409 TLQELSTICIMCNDSAIDYNEFKQAFEKVGEATETALIVLAEKLNSFSVNKSGLDRRSAA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
IA R ++ETKWKKEFTLEFSRDRKSMSSYCT FVKGAPEGVLERCTH
Sbjct: 469 IACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKL-FVKGAPEGVLERCTH 527
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
AR+G+ K PLT+ LK +IL LT QYGTGRDTLRCL LA AD+P+KP++M+L DSTKF Y
Sbjct: 528 ARVGTTKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFYQY 587
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
EVNLTFVGVVGMLDPPRKEVFDSI RCRAAGIRVIVITGDNKATAEAICRRIGVF E+ED
Sbjct: 588 EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDED 647
Query: 772 TTGKSYSKAE 781
TTGKSYS E
Sbjct: 648 TTGKSYSGRE 657
|
|
| UNIPROTKB|Q292Q0 Ca-P60A "Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
Score = 2429 (860.1 bits), Expect = 4.0e-307, Sum P(3) = 4.0e-307
Identities = 478/567 (84%), Positives = 513/567 (90%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAESAIEALKEYEPEMGKVIR DKSG+QKVRAKEIVPGD+VEVSVGDKIPADIRL I
Sbjct: 109 ERNAESAIEALKEYEPEMGKVIRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRLTHI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
YSTTIRIDQSILTGESVSVIKHTDA+PDPRAVNQDKKNILFSGTNVAAGKARG+V+GTGL
Sbjct: 169 YSTTIRIDQSILTGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGL 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
+TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHGGSW
Sbjct: 229 STAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
IKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSVSRM IF+K+EG+DSSFLEFE+TGSTYEPIG++FL G ++K +DYE
Sbjct: 349 CSDKTGTLTTNQMSVSRMLIFEKVEGNDSSFLEFELTGSTYEPIGELFLGGQRVKASDYE 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL T+CIMCNDSAID+NEFK AFEKVGEATETALIVLAEKLN F+V+KSGL RR A
Sbjct: 409 ALQELATVCIMCNDSAIDYNEFKAAFEKVGEATETALIVLAEKLNAFSVNKSGLDRRSNA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
IA R ++ETKWKKEFTLEFSRDRKSMSSYCT FVKGAPEGVL+RCTH
Sbjct: 469 IAARGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKL-FVKGAPEGVLDRCTH 527
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
AR+G+ K PLT+ LK +IL LT QYGTGRDTLRCL LA AD+P++PEDM+L DSTKF Y
Sbjct: 528 ARVGTSKVPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPIRPEDMDLGDSTKFYQY 587
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
EVNLTFVGVVGMLDPPRKEVFD+I RCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED
Sbjct: 588 EVNLTFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 647
Query: 772 TTGKSYSKAE---IGIAMGSGTAVAKS 795
TTGKSYS E + IA AVA+S
Sbjct: 648 TTGKSYSGREFDDLSIAEQKA-AVARS 673
|
|
| WB|WBGene00004736 sca-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 2073 (734.8 bits), Expect = 1.2e-260, Sum P(3) = 1.2e-260
Identities = 409/552 (74%), Positives = 456/552 (82%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAESAIEALKEYEPEM KVIR G+Q VRAKE+VPGD+VEVSVGDKIPAD+RL+KI
Sbjct: 111 ERNAESAIEALKEYEPEMAKVIRSGHHGIQMVRAKELVPGDLVEVSVGDKIPADLRLVKI 170
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
YSTTIRIDQSILTGESVSVIKHTD+VPDPRAVNQDKKN LFSGTNVA+GKARGIV GTGL
Sbjct: 171 YSTTIRIDQSILTGESVSVIKHTDSVPDPRAVNQDKKNCLFSGTNVASGKARGIVFGTGL 230
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
T IGKIRTEM+ETE KTPLQQKLDEFGEQLSKVIS+ICVAVWAINIGHFNDPAHGGSW
Sbjct: 231 TTEIGKIRTEMAETENEKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSW 290
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
+KGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 291 VKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 350
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA--D 529
CSDKTGTLTTNQMSVS+MFI + G + +F EF I+GSTYEP+G V NG +I A +
Sbjct: 351 CSDKTGTLTTNQMSVSKMFIAGQASGDNINFTEFAISGSTYEPVGKVSTNGREINPAAGE 410
Query: 530 YETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRRE 589
+E+L EL IC MCNDS++D+NE K+ +EKVGEATETALIVLAEK+N F SK+GL +E
Sbjct: 411 FESLTELAMICAMCNDSSVDYNETKKIYEKVGEATETALIVLAEKMNVFGTSKAGLSPKE 470
Query: 590 QAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERC 649
+ ++ KWKKEFTLEFSRDRKSMS+YC FVKGAPEGVL RC
Sbjct: 471 LGGVCNRVIQQKWKKEFTLEFSRDRKSMSAYC----FPASGGSGAKMFVKGAPEGVLGRC 526
Query: 650 THARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFA 709
TH R+ QK PLT+ + +I+D QYGTGRDTLRCL L T D P+ +MNL DST+F
Sbjct: 527 THVRVNGQKVPLTSAMTQKIVDQCVQYGTGRDTLRCLALGTIDTPVSVSNMNLEDSTQFV 586
Query: 710 SYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE 769
YE ++TFVGVVGMLDPPR EV DSI C AGIRVI+ITGDNK TAEAI RRIG+F E
Sbjct: 587 KYEQDITFVGVVGMLDPPRTEVSDSIKACNHAGIRVIMITGDNKNTAEAIGRRIGLFGEN 646
Query: 770 EDTTGKSYSKAE 781
EDTTGK+Y+ E
Sbjct: 647 EDTTGKAYTGRE 658
|
|
| UNIPROTKB|F1MPR3 ATP2A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1704 (604.9 bits), Expect = 6.7e-260, Sum P(5) = 6.7e-260
Identities = 330/479 (68%), Positives = 379/479 (79%)
Query: 303 LTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEM 362
+ GESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+ TG+NT IGKIR EM
Sbjct: 153 IAGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEM 212
Query: 363 SETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIA 422
TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HGGSWI+GA+YYFKIA
Sbjct: 213 VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIA 272
Query: 423 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN 482
VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN
Sbjct: 273 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN 332
Query: 483 QMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIM 542
QMSV RMFI DK+EG S EF ITGSTY PIG++ + +K Y+ L EL TIC +
Sbjct: 333 QMSVCRMFILDKVEGDTCSLNEFTITGSTYAPIGEIHKDDKPVKCHQYDGLVELATICAL 392
Query: 543 CNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKW 602
CNDSA+D+NE K +EKVGEATETAL L EK+N F+ GL + E+A A ++
Sbjct: 393 CNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIERANACNSVIKQLM 452
Query: 603 KKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTHARIGSQKFPLT 662
KKEFTLEFSRDRKSMS YCT FVKGAPEGV++RCTH R+GS K P+T
Sbjct: 453 KKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKM--FVKGAPEGVIDRCTHIRVGSTKVPMT 510
Query: 663 ATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVG 722
+K +I+ + R++G+G DTLRCL LAT DNPL+ E+MNL DS F YE NLTFVG VG
Sbjct: 511 PGVKQKIMSVIREWGSGSDTLRCLALATHDNPLRREEMNLEDSANFIKYETNLTFVGCVG 570
Query: 723 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSKAE 781
MLDPPR EV S+ CR AGIRVI+ITGDNK TA AICRRIG+F ++ED T K+++ E
Sbjct: 571 MLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFRQDEDVTAKAFTGRE 629
|
|
| UNIPROTKB|H7C5W9 ATP2A2 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1693 (601.0 bits), Expect = 3.7e-257, Sum P(5) = 3.7e-257
Identities = 328/479 (68%), Positives = 379/479 (79%)
Query: 303 LTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEM 362
+ GESVSVIKHTD VPDPRAVNQDKKN+LFSGTN+AAGKA G+V+ TG+NT IGKIR EM
Sbjct: 71 IAGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEM 130
Query: 363 SETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIA 422
TE+ +TPLQQKLDEFGEQLSKVIS+IC+AVW INIGHFNDP HGGSWI+GA+YYFKIA
Sbjct: 131 VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFNDPVHGGSWIRGAIYYFKIA 190
Query: 423 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN 482
VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN
Sbjct: 191 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN 250
Query: 483 QMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIM 542
QMSV RMFI D++EG S EF ITGSTY PIG+V + + Y+ L EL TIC +
Sbjct: 251 QMSVCRMFILDRVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVNCHQYDGLVELATICAL 310
Query: 543 CNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKW 602
CNDSA+D+NE K +EKVGEATETAL L EK+N F+ GL + E+A A ++
Sbjct: 311 CNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIERANACNSVIKQLM 370
Query: 603 KKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTHARIGSQKFPLT 662
KKEFTLEFSRDRKSMS YCT FVKGAPEGV++RCTH R+GS K P+T
Sbjct: 371 KKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKM--FVKGAPEGVIDRCTHIRVGSTKVPMT 428
Query: 663 ATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVG 722
+ +K +I+ + R++G+G DTLRCL LAT DNPL+ E+M+L DS F YE NLTFVG VG
Sbjct: 429 SGVKQKIMSVIREWGSGSDTLRCLALATHDNPLRREEMHLEDSANFIKYETNLTFVGCVG 488
Query: 723 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSKAE 781
MLDPPR EV S+ CR AGIRVI+ITGDNK TA AICRRIG+F ++ED T K+++ E
Sbjct: 489 MLDPPRIEVASSVKLCRQAGIRVIMITGDNKGTAVAICRRIGIFGQDEDVTSKAFTGRE 547
|
|
| UNIPROTKB|P13585 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1987 (704.5 bits), Expect = 1.1e-256, Sum P(4) = 1.1e-256
Identities = 386/550 (70%), Positives = 445/550 (80%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAE+AIEALKEYEPEMGKV R D+ VQ+++A+++VPGDI EV+VGDK+PADIR+I I
Sbjct: 109 ERNAENAIEALKEYEPEMGKVYRADRKAVQRIKARDLVPGDIAEVAVGDKVPADIRIISI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
STT+R+DQSILTGESVSVIKHT+ VPDPRAVNQDKKN+LFSGTN+ AGKA GIV+ TG+
Sbjct: 169 KSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIGAGKAVGIVVATGV 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
NT IGKIR EM+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HGGSW
Sbjct: 229 NTEIGKIRDEMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
I+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSV +MFI DK+EG S EF ITGSTY P GDV N IK ++
Sbjct: 349 CSDKTGTLTTNQMSVCKMFIVDKVEGDVCSLNEFSITGSTYAPEGDVLKNEKHIKAGQHD 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL TIC +CNDS++D+NE K +EKVGEATETAL L EK+N FN L + E+A
Sbjct: 409 GLVELATICALCNDSSLDYNEAKGIYEKVGEATETALTCLVEKMNVFNTDVRSLSKVERA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
A ++ KKEFTLEFSRDRKSMS YC+ FVKGAPEGV++RC +
Sbjct: 469 NACNSVIKQLMKKEFTLEFSRDRKSMSVYCSPAKASRAAVGNKM-FVKGAPEGVIDRCNY 527
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
R+G+ + PLT +K +IL + +++GTGRDTLRCL LAT D P K EDM L DSTKFA Y
Sbjct: 528 VRVGTTRVPLTPAVKEKILAVIKEWGTGRDTLRCLALATRDTPPKMEDMMLVDSTKFAEY 587
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
E +LTFVG VGMLDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+FTE+E+
Sbjct: 588 ETDLTFVGCVGMLDPPRKEVMGSIRLCRDAGIRVIMITGDNKGTAIAICRRIGIFTEDEE 647
Query: 772 TTGKSYSKAE 781
+G++Y+ E
Sbjct: 648 VSGRAYTGRE 657
|
|
| UNIPROTKB|Q92105 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Pelophylax esculentus (taxid:8401)] | Back alignment and assigned GO terms |
|---|
Score = 1981 (702.4 bits), Expect = 1.8e-254, Sum P(4) = 1.8e-254
Identities = 386/550 (70%), Positives = 443/550 (80%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAE AIEALKEYEPEMGKV R D+ VQ+++A+E+VPGDIVEV+VGDK+PADIRLI I
Sbjct: 109 ERNAEDAIEALKEYEPEMGKVYRSDRKSVQRIKARELVPGDIVEVAVGDKVPADIRLISI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
STT+RIDQSILTGESVSVIKHT+ VPD RAVNQDKKN+LFSGTNV AGKA G+V+ TG
Sbjct: 169 KSTTLRIDQSILTGESVSVIKHTEVVPDTRAVNQDKKNMLFSGTNVGAGKAVGVVIATGP 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
NT IGKIR EM+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HGGSW
Sbjct: 229 NTEIGKIRDEMAATEQEKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPIHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
IKGA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSV RMF+ DK+EG +S EF ITGSTY P GDV N +K Y+
Sbjct: 349 CSDKTGTLTTNQMSVCRMFVIDKVEGDVTSLNEFTITGSTYAPEGDVQKNDKNVKAGQYD 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL TIC +CNDS++DFNE K FEKVGEATETAL L EK+N FN L + E+A
Sbjct: 409 GLVELATICALCNDSSLDFNESKGVFEKVGEATETALTTLVEKMNVFNTDVKSLSKVERA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
A ++ KKEFTLEFSRDRKSMS YC FVKGAPEGV++RC +
Sbjct: 469 NACNSVIKQLMKKEFTLEFSRDRKSMSVYCIPAKASRAAVGNKM-FVKGAPEGVIDRCNY 527
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
R+G+ + PLT+ +K++IL + +++GTGRDTLRCL LAT D P K EDM L ++T+F Y
Sbjct: 528 VRVGTTRVPLTSAIKDKILSVVKEWGTGRDTLRCLALATRDTPPKREDMVLDEATRFIEY 587
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
E +LTFVG VGMLDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+F E++D
Sbjct: 588 ETDLTFVGCVGMLDPPRKEVMGSIQLCREAGIRVIMITGDNKGTAIAICRRIGIFGEDDD 647
Query: 772 TTGKSYSKAE 781
+G++++ E
Sbjct: 648 VSGRAFTGRE 657
|
|
| UNIPROTKB|Q9DDB9 atp2A1 "Ca2+-ATPase 1" [Rana clamitans (taxid:145282)] | Back alignment and assigned GO terms |
|---|
Score = 1999 (708.7 bits), Expect = 2.1e-254, Sum P(3) = 2.1e-254
Identities = 393/550 (71%), Positives = 442/550 (80%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAE AIEALKEYEPEMGKV R D+ VQ+++A+EIVPGDIVE++VGDK+PADIRLI I
Sbjct: 109 ERNAEDAIEALKEYEPEMGKVYRSDRKSVQRIKAREIVPGDIVEIAVGDKVPADIRLISI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
STT+RIDQSILTGESVSVIKHTD VPD RAVNQDKKN+LFSGTNV AGKA GIV+ TG
Sbjct: 169 KSTTLRIDQSILTGESVSVIKHTDVVPDLRAVNQDKKNMLFSGTNVGAGKAIGIVIATGA 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
NT IGKIR EM+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HGGSW
Sbjct: 229 NTEIGKIRDEMAATEQEKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPIHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSV RMF+ DK+EG +S EF ITGSTY P GDV N +K Y+
Sbjct: 349 CSDKTGTLTTNQMSVCRMFVLDKVEGDVASLNEFTITGSTYAPEGDVQKNDKNVKAGQYD 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL TIC +CNDS++DFNE K FEKVGEATETAL L EK+N FN L + E+A
Sbjct: 409 GLVELATICALCNDSSLDFNEAKGVFEKVGEATETALTTLVEKMNVFNTDVKSLSKVERA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
A ++ KKEFTLEFSRDRKSMS YCT FVKGAPEGV++RC +
Sbjct: 469 NACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGNKM-FVKGAPEGVIDRCNY 527
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
R+G+ + P T+ +K++IL + +++GTGRDTLRCL LAT D P K EDM L DSTKFA Y
Sbjct: 528 VRVGTTRVPFTSGIKDKILSVVKEWGTGRDTLRCLALATRDTPPKREDMVLEDSTKFADY 587
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
E +LTFVG VGMLDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+F E +D
Sbjct: 588 ETDLTFVGCVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENDD 647
Query: 772 TTGKSYSKAE 781
+ ++Y+ E
Sbjct: 648 VSSRAYTGRE 657
|
|
| UNIPROTKB|Q9DDB8 atp2A1 "Ca2+-ATPase" [Rana sylvatica (taxid:45438)] | Back alignment and assigned GO terms |
|---|
Score = 1990 (705.6 bits), Expect = 2.4e-253, Sum P(3) = 2.4e-253
Identities = 391/550 (71%), Positives = 442/550 (80%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAE AIEALKEYEPEMGKV R D+ VQ+++A+EIVPGDIVE++VGDK+PADIRLI I
Sbjct: 109 ERNAEDAIEALKEYEPEMGKVYRSDRKSVQRIKAREIVPGDIVEIAVGDKVPADIRLISI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
STT+RIDQSILTGESVSVIKHTD VPD RAVNQDKKN+LFSGTNV AGKA GIV+ TG
Sbjct: 169 KSTTLRIDQSILTGESVSVIKHTDVVPDLRAVNQDKKNMLFSGTNVGAGKAIGIVIATGA 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
NT IGKIR EM+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HGGSW
Sbjct: 229 NTEIGKIRDEMAATEQEKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPIHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSV RMF+ DK+EG +S EF ITGSTY P GDV N +K Y+
Sbjct: 349 CSDKTGTLTTNQMSVCRMFVLDKVEGDVASLNEFTITGSTYAPEGDVQKNDKNVKAGQYD 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL TIC +CNDS++DFNE K FEKVGEATETAL L EK+N FN L + E+A
Sbjct: 409 GLVELATICALCNDSSLDFNEAKGVFEKVGEATETALTTLVEKMNVFNTEVKSLSKVERA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
A ++ KKEFTLEFSRDRKSMS YCT FVKGAPEGV++RC +
Sbjct: 469 NACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGNKM-FVKGAPEGVIDRCNY 527
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
R+G+ + P T+ +K++I + +++GTGRDTLRCL LAT D P K EDM L D+TKFA Y
Sbjct: 528 VRVGTTRVPFTSAIKDKINAVVKEWGTGRDTLRCLALATRDTPPKREDMVLEDATKFAEY 587
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
E +LTFVG VGMLDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+F+E +D
Sbjct: 588 ETDLTFVGCVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFSENDD 647
Query: 772 TTGKSYSKAE 781
+ ++Y+ E
Sbjct: 648 VSTRAYTGRE 657
|
|
| UNIPROTKB|F1RFH9 ATP2A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1961 (695.4 bits), Expect = 4.2e-253, Sum P(4) = 4.2e-253
Identities = 382/550 (69%), Positives = 439/550 (79%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAE+AIEALKEYEPEMGKV R D+ VQ+++A++IVPGDIVEV+VGDK+PADIR++ I
Sbjct: 109 ERNAENAIEALKEYEPEMGKVYRADRKAVQRIKARDIVPGDIVEVAVGDKVPADIRILTI 168
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
STT+R+DQSILTGESVSVIKHT+ VPDPRAVNQDKKN+LFSGTN+AAGKA GIV TG+
Sbjct: 169 KSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGV 228
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
NT IGKIR +M+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HGGSW
Sbjct: 229 NTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW 288
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
I+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI
Sbjct: 289 IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 348
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSV +MF+ DK+EG EF ITGSTY P G+V N ++ Y+
Sbjct: 349 CSDKTGTLTTNQMSVCKMFVIDKVEGDICLLNEFSITGSTYAPEGEVLKNDKPVRAGQYD 408
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL TIC +CNDS++DFNE K +EKVGEATETAL L EK+N FN L + E+A
Sbjct: 409 GLVELATICALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTDVRNLSKVERA 468
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTXXXXXXXXXXXXXXFVKGAPEGVLERCTH 651
A + KKEFTLEFSRDRKSMS YC+ FVKGAPEGV+ERC +
Sbjct: 469 NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKM--FVKGAPEGVIERCNY 526
Query: 652 ARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY 711
R+G+ + P+T +K RIL + +++GTGRDTLRCL LAT D P K EDM L DS +F Y
Sbjct: 527 VRVGTTRVPMTGPVKERILSVIKEWGTGRDTLRCLALATRDTPPKREDMVLDDSARFMEY 586
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED 771
E +LTFVGVVGMLDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+F E ED
Sbjct: 587 ETDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENED 646
Query: 772 TTGKSYSKAE 781
++Y+ E
Sbjct: 647 VADRAYTGRE 656
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q03669 | AT2A2_CHICK | 3, ., 6, ., 3, ., 8 | 0.6120 | 0.7536 | 0.6964 | yes | N/A |
| Q9SY55 | ECA3_ARATH | 3, ., 6, ., 3, ., 8 | 0.4530 | 0.7162 | 0.6903 | yes | N/A |
| O46674 | AT2A2_CANFA | 3, ., 6, ., 3, ., 8 | 0.6108 | 0.7536 | 0.7271 | yes | N/A |
| Q292Q0 | ATC1_DROPS | 3, ., 6, ., 3, ., 8 | 0.7020 | 0.7474 | 0.7175 | yes | N/A |
| P11507 | AT2A2_RAT | 3, ., 6, ., 3, ., 8 | 0.6120 | 0.7536 | 0.6951 | yes | N/A |
| Q0VCY0 | AT2A1_BOVIN | 3, ., 6, ., 3, ., 8 | 0.6086 | 0.7557 | 0.7321 | yes | N/A |
| P11607 | AT2A2_PIG | 3, ., 6, ., 3, ., 8 | 0.6108 | 0.7536 | 0.6957 | yes | N/A |
| O55143 | AT2A2_MOUSE | 3, ., 6, ., 3, ., 8 | 0.6133 | 0.7536 | 0.6944 | yes | N/A |
| Q7PPA5 | ATC1_ANOGA | 3, ., 6, ., 3, ., 8 | 0.7549 | 0.7546 | 0.7131 | yes | N/A |
| P22700 | ATC1_DROME | 3, ., 6, ., 3, ., 8 | 0.7192 | 0.7546 | 0.7117 | yes | N/A |
| P20647 | AT2A2_RABIT | 3, ., 6, ., 3, ., 8 | 0.6145 | 0.7536 | 0.6957 | yes | N/A |
| P16615 | AT2A2_HUMAN | 3, ., 6, ., 3, ., 8 | 0.6108 | 0.7536 | 0.6957 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 962 | |||
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-143 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-120 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-109 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 7e-79 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-71 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-58 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-57 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 9e-52 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-47 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-37 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-33 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-30 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-29 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 6e-28 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 2e-24 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 2e-24 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-23 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 4e-23 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 6e-22 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-21 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 7e-21 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-20 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-17 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-17 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 7e-17 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-15 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-15 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-14 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-14 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-13 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-13 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-12 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-11 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-11 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-11 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-11 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-11 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-10 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-10 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-10 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-10 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-09 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 7e-09 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 8e-09 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-09 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 4e-08 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-07 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-07 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-07 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-06 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-06 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-06 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 4e-06 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-06 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 3e-05 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 7e-05 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-04 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 3e-04 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-04 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 7e-04 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 0.002 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 959 bits (2480), Expect = 0.0
Identities = 439/804 (54%), Positives = 523/804 (65%), Gaps = 96/804 (11%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
ERNAE AIEALKEYE E KV+R + V K AK++VPGDIVE++VGDK+PADIR++ +
Sbjct: 57 ERNAEKAIEALKEYESEHAKVLRDGRWSVIK--AKDLVPGDIVELAVGDKVPADIRVLSL 114
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
T+R+DQSILTGESVSV KHT++VPD RAVNQDKKN+LFSGT V AGKARG+V+ TG+
Sbjct: 115 K--TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGM 172
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
+T IGKIR EM E+ TPLQ+KLDEFGE LSKVI +IC+ VW INIGHFNDPA GG W
Sbjct: 173 STEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
I+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MAKKNAIVR LPSVETLGCT+VI
Sbjct: 233 IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVI 292
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYE 531
CSDKTGTLTTNQMSV ++ ++ S SS EF +TG+TY P G V + + G
Sbjct: 293 CSDKTGTLTTNQMSVCKVVA---LDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDA 349
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591
L EL TI +CNDS++DFNE K +EKVGEATE AL VL EK+ +R A
Sbjct: 350 GLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPA 409
Query: 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTH 651
+ K+KK TLEFSRDRKSMS C P S+G KLFVKGAPEGVLERCTH
Sbjct: 410 LGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-------STGNKLFVKGAPEGVLERCTH 462
Query: 652 ARIG-SQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFAS 710
G + PLT +KN IL + ++ GT LRCL LA D P E+ L+D F +
Sbjct: 463 ILNGDGRAVPLTDKMKNTILSVIKEMGT-TKALRCLALAFKDIPDPREEDLLSDPANFEA 521
Query: 711 YEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE 770
E +LTF+GVVGMLDPPR EV D+I +CR AGIRVI+ITGDNK TAEAICRRIG+F+ +E
Sbjct: 522 IESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDE 581
Query: 771 DT-----TGKSYS----------------------------------------------- 778
D TG+ +
Sbjct: 582 DVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVN 641
Query: 779 ------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLIS 832
KA+IGIAMGSGT VAK AS+MVLADDNF++IVAAVEEGRAIYNNMKQFIRY+IS
Sbjct: 642 DAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMIS 701
Query: 833 SNIGEVVSIFLTAALGLPEALIKKI-----STTNRGKKKKLSYNFLDISLL--GPAIHYQ 885
SNIGEVV IFLTAALG+PE LI T+ L +N D ++ P +
Sbjct: 702 SNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDE 761
Query: 886 VDLTGGPDQVYLSGLPDSIYYLPTTVFA-------THHMSCLG----GGDEFKGLDCHIF 934
+TG ++ L +Y TV TH C +F+ DC++F
Sbjct: 762 PLITG---WLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVF 818
Query: 935 HDPHPM-TMALSVLVTIEMLNAMN 957
P T++LSVLV IEM NA+N
Sbjct: 819 EGKQPARTISLSVLVVIEMFNALN 842
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 450 bits (1159), Expect = e-143
Identities = 229/682 (33%), Positives = 332/682 (48%), Gaps = 131/682 (19%)
Query: 227 RMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286
VQ E AE A+EALK+ KV+R K ++ A E+VPGDIV + GD +PAD+
Sbjct: 120 GFVQ-EYRAEKALEALKKMSSPKAKVLRDGK--FVEIPASELVPGDIVLLEAGDVVPADL 176
Query: 287 RLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRA-VNQDKKNILFSGTNVAAGKARGI 345
RL++ S+ + +D+S LTGES+ V K + A + D+ N+LFSGT V +G+A+GI
Sbjct: 177 RLLE--SSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGI 234
Query: 346 VMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDP 405
V+ TG T GKI + +E+KTPLQ+KL++ G+ L + ++ V+ + +
Sbjct: 235 VVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRG--- 291
Query: 406 AHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETL 465
G ++ + A+ALAVAA+PEGLPAV+T LALG +RMAK NAIVRSL ++ETL
Sbjct: 292 --GNGLLESFLT----ALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETL 345
Query: 466 GCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKI 525
G VICSDKTGTLT N+M+V +++I + D L
Sbjct: 346 GSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDL---------------------- 383
Query: 526 KGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGL 585
D L +CN + N + QA G+ TE AL+ AEKL F++ SGL
Sbjct: 384 --KDSPALLRFLLAAALCNSVTPEKNGWYQA----GDPTEGALVEFAEKLG-FSLDLSGL 436
Query: 586 GRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGV 645
+A + F +RK MS K LFVKGAPE +
Sbjct: 437 EVEYPILA-------------EIPFDSERKRMSVIV------KTDEGKYILFVKGAPEVI 477
Query: 646 LERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADS 705
LERC + PLT + + ++ + LR L +A +D
Sbjct: 478 LERCKSIG---ELEPLTEEGLRTLEEAVKEL--ASEGLRVLAVAYKKLDRAEKDD----- 527
Query: 706 TKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765
+ E +L F+G+ G+ DPPR++V ++I R AGI+V +ITGD+ TA AI + G+
Sbjct: 528 -EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGI 586
Query: 766 FTEEEDT---TGKSYSKA----------EIGI-----------------------AM-GS 788
E E G E+ + AM G
Sbjct: 587 EAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGD 646
Query: 789 GT-------------AVAKSASE-------MVLADDNFSSIVAAVEEGRAIYNNMKQFIR 828
G A+ ++ +VL DDNF++IV AV EGR +Y N+K+FI
Sbjct: 647 GVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFIL 706
Query: 829 YLISSNIGEVVSIFLTAALGLP 850
YL+S N+GEV+++ + + L
Sbjct: 707 YLLSKNVGEVLTLLIYSLFNLF 728
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 376 bits (968), Expect = e-120
Identities = 169/651 (25%), Positives = 269/651 (41%), Gaps = 159/651 (24%)
Query: 228 MVQLERNAESAIEALKEYE--PEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPAD 285
+V+ + AE + +L + V+R G +++ AK++VPGD+V V G+ +PAD
Sbjct: 13 VVKQKLKAEDILRSLSDRLVNTRPATVLRN---GWKEIPAKDLVPGDVVLVKSGETVPAD 69
Query: 286 IRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGI 345
L S + +D+S LTGES V+K +++F+GT V G +
Sbjct: 70 GVL---LSGSCFVDESNLTGESNPVLKTALKETQS---GTITGDLVFAGTYVFGGTLIVV 123
Query: 346 VMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQ-LSKVISIICVAVWAINIGHFND 404
V TG+ T +G+I + E +TPLQ K D + ++ +AV+ D
Sbjct: 124 VTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWD 183
Query: 405 PAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 464
P A+ + V +P LPA +T LA+G R+AKK +VR+L ++E
Sbjct: 184 PNSIFKA-------LLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEE 236
Query: 465 LGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSK 524
LG +CSDKTGTLT N+M++ ++I
Sbjct: 237 LGKVDYLCSDKTGTLTKNKMTLQGVYI--------------------------------- 263
Query: 525 IKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSG 584
+ G+ E AL+ AE + +
Sbjct: 264 ----------------DGGKEDNSSSLVACDNNYLSGDPMEKALLKSAELVGKADKGNK- 306
Query: 585 LGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEG 644
++K FS K MS + LFVKGAPE
Sbjct: 307 ----------------EYKILDVFPFSSVLKRMSVIV------ETPDGSDLLFVKGAPEF 344
Query: 645 VLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLAD 704
+LERC + + + L+L R LR L A+ +
Sbjct: 345 ILERCNN-------------YEEKYLELA------RQGLRVLAFASKELED--------- 376
Query: 705 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 764
+L F+G++ DP R + ++I +AAGI+V++ITGDN TA+AI + +G
Sbjct: 377 ---------DLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELG 427
Query: 765 ------VFTEEEDTTGKSY--------------------SKAEIGIAMGSGTAVAKSASE 798
V E++ ++ KA++GIAMG AK+A++
Sbjct: 428 IDVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG-----AKAAAD 482
Query: 799 MVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGL 849
+VL DD+ S+IV AV+EGR I++N+K I + I+ N+ + L + L
Sbjct: 483 IVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIIL 533
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 359 bits (922), Expect = e-109
Identities = 218/690 (31%), Positives = 336/690 (48%), Gaps = 143/690 (20%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
VQ E +E ++EAL + P +IR K + V A +VPGD+V +SVGD++PAD+R+
Sbjct: 99 VQ-EYRSEKSLEALNKLVPPECHLIREGKL--EHVLASTLVPGDLVCLSVGDRVPADLRI 155
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVN-QDKKNILFSGTNVAAGKARGIVM 347
++ + + ID+S LTGE+ V K T +P + ++ NI F GT V G +GIV+
Sbjct: 156 VE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVV 213
Query: 348 GTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLS----KVISIICVAVWAINIGHFN 403
GTG NT G + M E+ KTPLQ+ +D G+QLS VI +IC+ +G F
Sbjct: 214 GTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICL------VGWF- 266
Query: 404 DPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVE 463
G W++ F I+V+LAVAAIPEGLP ++T LALG RM+KK AIVR LPSVE
Sbjct: 267 ---QGKDWLE----MFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVE 319
Query: 464 TLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGS 523
TLG +VICSDKTGTLT N M+V++++ D L + + G+V ++G
Sbjct: 320 TLGSVNVICSDKTGTLTKNHMTVTKIWTSDG--------LHTMLNAVSLNQFGEVIVDGD 371
Query: 524 KIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKS 583
+ G + + +CN++ +A +G T+ ALI L K
Sbjct: 372 VLHGFYTVAVSRILEAGNLCNNAKFR----NEADTLLGNPTDVALIELLMKF-------- 419
Query: 584 GLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPE 643
GL D+ + + + FS +RK M+ C + F+KGA E
Sbjct: 420 GL----------DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRS-----EMCFMKGAYE 464
Query: 644 GVLERCT-HARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL 702
VL+ CT + + + LT ++ I + + + LR + A+ P K +
Sbjct: 465 QVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS--AGLRVIAFASG--PEKGQ---- 516
Query: 703 ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRR 762
LTF+G+VG+ DPPR V +++ G+R+I+ITGD++ TA +I RR
Sbjct: 517 ------------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR 564
Query: 763 IGVFTEEEDTTGKSYSKAEIG--------------------------------------I 784
+G+ + T +S S ++ +
Sbjct: 565 LGMPS----KTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVV 620
Query: 785 AM---GSGTAVAKSASE------------------MVLADDNFSSIVAAVEEGRAIYNNM 823
AM G A A ++ M+L DD+F++I++A+EEG+ I+NN+
Sbjct: 621 AMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNI 680
Query: 824 KQFIRYLISSNIGEVVSIFLTAALGLPEAL 853
K FI + +S+++ + I L +G P L
Sbjct: 681 KNFITFQLSTSVAALSLIALATLMGFPNPL 710
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 276 bits (707), Expect = 7e-79
Identities = 180/667 (26%), Positives = 279/667 (41%), Gaps = 148/667 (22%)
Query: 251 KVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 310
VIRG + Q++ +IV GDIV +S GD +PAD I S + ID+S +TGES
Sbjct: 170 AVIRGGQ--EQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS--LEIDESSITGES--- 222
Query: 311 IKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKT 370
DP + L SGT V G R +V G+N+ GK+ E+ + E T
Sbjct: 223 --------DPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDST 274
Query: 371 PLQQKLDEFGEQLSK----------VISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFK 420
PLQ+KL E + K ++ + I + +++ +F
Sbjct: 275 PLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLD----HFI 330
Query: 421 IAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLT 480
IAV + V A+PEGLP +T LA ++M K N +VR L + ET+G + ICSDKTGTLT
Sbjct: 331 IAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLT 390
Query: 481 TNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTIC 540
N MSV + + IG+ N + + + +
Sbjct: 391 QNVMSVVQGY------------------------IGEQRFNVRDVLRNVPKHVRNILVEG 426
Query: 541 IMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVET 600
I N S+ + + +G TE AL+ G + +D +
Sbjct: 427 ISLNSSSEEVVDRGGKRAFIGSKTECALL--------------DFGLL-----LLRDYQE 467
Query: 601 KWKKEFTLE---FSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHAR-IGS 656
+E ++ F+ +RK MS + G + F KGA E VL+ C
Sbjct: 468 VRAEEKVVKIYPFNSERKFMSV----VVKHSGGKY--REFRKGASEIVLKPCRKRLDSNG 521
Query: 657 QKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASY-EVNL 715
+ P++ K+R D+ + D LR + LA D + Y L
Sbjct: 522 EATPISDDDKDRCADVIEPLAS--DALRTICLAYRDFAPEEFP--------RKDYPNKGL 571
Query: 716 TFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE----ED 771
T +GVVG+ DP R V +++ C+ AGI V ++TGDN TA+AI R G+ T E
Sbjct: 572 TLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEG 631
Query: 772 TTGKSYSKAEI----------------------GIAMGSGTAVA---------------- 793
+S E+ + G VA
Sbjct: 632 KEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLAD 691
Query: 794 -------------KSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840
K AS+++L DDNF+SIV AV+ GR +Y+N+++F+++ ++ N+ V+
Sbjct: 692 VGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVIL 751
Query: 841 IFLTAAL 847
F+ + +
Sbjct: 752 TFVGSCI 758
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 2e-71
Identities = 182/572 (31%), Positives = 282/572 (49%), Gaps = 113/572 (19%)
Query: 232 ERNAESAIEALKEYEPEMGKVIR-GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK 290
E + +E+ K P+ VIR G+K + A+++V GD+VEV GD+IPAD+R+I
Sbjct: 125 EAKSSKIMESFKNMVPQQALVIRDGEK---MSINAEQVVVGDLVEVKGGDRIPADLRIIS 181
Query: 291 IYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVN------QDKKNILFSGTNVAAGKARG 344
+ ++D S LTGES P R+ + +NI F TN G ARG
Sbjct: 182 --AQGCKVDNSSLTGESE---------PQTRSPEFTHENPLETRNIAFFSTNCVEGTARG 230
Query: 345 IVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFND 404
IV+ TG T +G+I + S E KTP+ +++ F ++ V + V+ + +++
Sbjct: 231 IVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSL----- 285
Query: 405 PAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 464
G +W++ ++ + + VA +PEGL A +T CL L +RMA+KN +V++L +VET
Sbjct: 286 -ILGYTWLEAVIFL----IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET 340
Query: 465 LGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSK 524
LG TS ICSDKTGTLT N+M+V+ M+ ++I +D +T + G F S
Sbjct: 341 LGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD----------TTEDQSGVSFDKSS- 389
Query: 525 IKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKV--------GEATETALIVLAEKLN 576
T L I +CN + FK E V G+A+E+AL+ E L
Sbjct: 390 ------ATWLALSRIAGLCNRA-----VFKAGQENVPILKRAVAGDASESALLKCIE-LC 437
Query: 577 PFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEF-SRDRKSMSSYCTPLKSSKLGSSGPK 635
+V ++ + K + F S ++ +S + P+
Sbjct: 438 LGSV---------------MEMRERNPKVVEIPFNSTNKYQLSIHENE------DPRDPR 476
Query: 636 --LFVKGAPEGVLERCTHARIGSQKFPLTATLK----NRILDLTRQYGTGRDTLRCLG-- 687
L +KGAPE +LERC+ I ++ PL LK N L+L G G R LG
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELG---GLGE---RVLGFC 530
Query: 688 ---LATADNP----LKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRA 740
L P +D+N NL FVG++ M+DPPR V D++ +CR+
Sbjct: 531 HLYLPDEQFPEGFQFDTDDVNFPTD--------NLCFVGLISMIDPPRAAVPDAVGKCRS 582
Query: 741 AGIRVIVITGDNKATAEAICRRIGVFTEEEDT 772
AGI+VI++TGD+ TA+AI + +G+ +E +T
Sbjct: 583 AGIKVIMVTGDHPITAKAIAKGVGIISEGNET 614
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 216 bits (550), Expect = 8e-58
Identities = 164/613 (26%), Positives = 271/613 (44%), Gaps = 108/613 (17%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
E AE +++LK M VIR KS + + ++VPGDI + GD IPAD+RLI+
Sbjct: 102 EYKAEKTMDSLKNLASPMAHVIRNGKS--DAIDSHDLVPGDICLLKTGDTIPADLRLIE- 158
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAV--PDPRAVNQDKKNILFSGTNVAAGKARGIVMGT 349
+ D+++LTGES+ VIK A + D+ N+ FS + V G+A+GI + T
Sbjct: 159 -TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIAT 217
Query: 350 GLNTAIGKI------------RTEMSETE-----------------------EIKTPLQQ 374
LN+ IG I R E + + TPL +
Sbjct: 218 ALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHR 277
Query: 375 KLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434
KL + L + I + V A + + + A+Y A+ LA++ IPE L
Sbjct: 278 KLSKLAVILFCIAIIFAIIVMAAHKFDVDK--------EVAIY----AICLAISIIPESL 325
Query: 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFI--- 491
AV++ +A+G M+K+N IVR L ++E LG + ICSDKTGT+T +M +++I
Sbjct: 326 IAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRF 385
Query: 492 -----------FDKIEGSDSSFLEFEITGSTYEPIGDV---------FLNGSKIKGADYE 531
F+ EG+ S F ++ D + D +
Sbjct: 386 GTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMD 445
Query: 532 TLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLG----- 586
+L + N + + ++ ++ G+ TE A+ V A+K + + + +G
Sbjct: 446 LFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKS 505
Query: 587 --RREQAIAVRQDVETKWKKEFTLEFSRDR--KSMSSYCTPLKSSKLGSSGPKLFVKGAP 642
+ +++ + + EF EF D K M+S ++ KGA
Sbjct: 506 NENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY-----NIYAKGAF 560
Query: 643 EGVLERCT--HARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATA--------D 692
E ++E C+ + + G + PL +R L + + LR L A+ D
Sbjct: 561 ERIIECCSSSNGKDGVKISPLEDC--DRELIIANMESLAAEGLRVLAFASKSFDKADNND 618
Query: 693 NPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752
+ LK E +N A + E +L F+G++G+ DPPR E ++ +C AGI V ++TGD
Sbjct: 619 DQLKNETLNRATA------ESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDF 672
Query: 753 KATAEAICRRIGV 765
TA+AI + +G+
Sbjct: 673 PETAKAIAQEVGI 685
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 5e-57
Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 29/234 (12%)
Query: 232 ERNAESAIEALKEYEPEMG-KVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK 290
E A A++ALK+ P VIR K +++ A E+V GDIV + GD++PAD R+I
Sbjct: 17 EYRARKALKALKKLLPPTAATVIRDGK--EEEIPADELVVGDIVLLKPGDRVPADGRII- 73
Query: 291 IYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350
++ +D+S LTGES+ V K + + +F+GT V +G+ + IV TG
Sbjct: 74 --EGSLEVDESALTGESLPVEKS-------------RGDTVFAGTVVLSGELKVIVTATG 118
Query: 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGS 410
+T +GKI + E + KTPLQ+ LD+ + L ++ + + V+ I D
Sbjct: 119 EDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGGDFLE--- 175
Query: 411 WIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 464
A+A+ VAA PE LP + LA+G R+AKK +V++L ++ET
Sbjct: 176 -------ALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 9e-52
Identities = 89/129 (68%), Positives = 106/129 (82%), Gaps = 7/129 (5%)
Query: 80 VLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI 139
VLA FEE E T+T+FVEPFVILLIL+ANAIVGVWQERNAE AIEALKEYE E KV+
Sbjct: 22 VLAWFEEGE---ETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVL 78
Query: 140 RGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKH 199
R + V K AK++VPGDIVE++VGDK+PADIR++ + T+R+DQSILTGESVSV KH
Sbjct: 79 RDGRWSVIK--AKDLVPGDIVELAVGDKVPADIRVLSLK--TLRVDQSILTGESVSVNKH 134
Query: 200 TDAVPDPRA 208
T++VPD RA
Sbjct: 135 TESVPDERA 143
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 1e-47
Identities = 88/261 (33%), Positives = 136/261 (52%), Gaps = 26/261 (9%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
E A +A+EALK+ +V+R K Q++ A E+VPGD+V + +GD +PAD RL +
Sbjct: 76 ENKAGNAVEALKQSLAPKARVLRDGK--WQEIPASELVPGDVVRLKIGDIVPADCRLFE- 132
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
I++DQ+ LTGES+ V K T + +SG+ V G+A +V TG+
Sbjct: 133 -GDYIQVDQAALTGESLPVTKKTGDIA-------------YSGSTVKQGEAEAVVTATGM 178
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
NT GK + TE LQ+ L + G L +I ++ + + + G
Sbjct: 179 NTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREG-- 236
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
+ A+ L V IP +PAV++ +A+G +AKK AIV L ++E L ++
Sbjct: 237 -------LQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDIL 289
Query: 472 CSDKTGTLTTNQMSVSRMFIF 492
CSDKTGTLT N++S+ + F
Sbjct: 290 CSDKTGTLTLNKLSIDEILPF 310
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 7e-37
Identities = 84/263 (31%), Positives = 139/263 (52%), Gaps = 20/263 (7%)
Query: 227 RMVQLERNAESAIEALKEYEPEMGKVIR---GDKSGVQ-KVRAKEIVPGDIVEVSVGDKI 282
+Q R AE A ALK V+R + +G +V +VPGD++E++ GD I
Sbjct: 105 GFIQESR-AERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDII 163
Query: 283 PADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQ-DKKNILFSGTNVAAGK 341
PAD R+I + + I+QS LTGES+ V K R +++N+ F GTNV +G
Sbjct: 164 PADARVIS--ARDLFINQSALTGESLPVEKF-VEDKRARDPEILERENLCFMGTNVLSGH 220
Query: 342 ARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGH 401
A+ +V+ TG +T G + +E +T + + + L + + ++ V IN G
Sbjct: 221 AQAVVLATGSSTWFGSLAIAATERRG-QTAFDKGVKSVSKLLIRFMLVMVPVVLMIN-GL 278
Query: 402 FNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 461
G W++ ++ A+A+AV PE LP ++++ LA G M+KK IV+ L +
Sbjct: 279 MK-----GDWLEAFLF----ALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSA 329
Query: 462 VETLGCTSVICSDKTGTLTTNQM 484
++ G ++C+DKTGTLT +++
Sbjct: 330 IQNFGAMDILCTDKTGTLTQDKI 352
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 2e-33
Identities = 79/270 (29%), Positives = 142/270 (52%), Gaps = 25/270 (9%)
Query: 227 RMVQLERNAESAIEALKEYEPEMGKVIRGD----KSGVQKVRAKEIVPGDIVEVSVGDKI 282
+Q R+ ++A +ALK V+R ++G ++ ++VPGDI++++ GD I
Sbjct: 139 NFIQEARSTKAA-DALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMI 197
Query: 283 PADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQ----DKKNILFSGTNVA 338
PAD+R+++ + + + Q+ LTGES+ V K R + + F GTNV
Sbjct: 198 PADLRILQ--ARDLFVAQASLTGESLPVEK----FATTRQPEHSNPLECDTLCFMGTNVV 251
Query: 339 AGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAIN 398
+G A+ +V+ TG NT G++ +SE + QQ + L + + ++ V IN
Sbjct: 252 SGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLIN 311
Query: 399 IGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRS 458
G+ G W + A++ +AV L PE LP ++T+ LA G +++K+ IV+
Sbjct: 312 -GYTK-----GDWWEAALFALSVAVGLT----PEMLPMIVTSTLARGAVKLSKQKVIVKR 361
Query: 459 LPSVETLGCTSVICSDKTGTLTTNQMSVSR 488
L +++ G ++C+DKTGTLT +++ +
Sbjct: 362 LDAIQNFGAMDILCTDKTGTLTQDKIVLEN 391
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 2e-30
Identities = 91/271 (33%), Positives = 140/271 (51%), Gaps = 34/271 (12%)
Query: 227 RMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVR----AKEIVPGDIVEVSVGDKI 282
R Q R+ ++A EALK V+R +G + VR +E+VPGDIV +S GD I
Sbjct: 128 RFWQEFRSNKAA-EALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186
Query: 283 PADIRLIKIYSTTIRIDQSILTGESVSV----------IKHTDAVPDPRAVNQDKKNILF 332
PAD+RLI+ S + I Q++LTGE++ V K DA+ D D NI F
Sbjct: 187 PADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICF 244
Query: 333 SGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICV 392
GTNV +G A +V+ TG T G + + T +T + ++ L + + ++
Sbjct: 245 MGTNVVSGTATAVVVATGSRTYFGSLAKSIVGT-RAQTAFDRGVNSVSWLLIRFMLVMVP 303
Query: 393 AVWAINIGHFNDPAHG---GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM 449
V IN G G W++ ++ A+A+AV PE LP ++++ LA G M
Sbjct: 304 VVLLIN---------GFTKGDWLEALLF----ALAVAVGLTPEMLPMIVSSNLAKGAIAM 350
Query: 450 AKKNAIVRSLPSVETLGCTSVICSDKTGTLT 480
A++ +V+ L +++ G V+C+DKTGTLT
Sbjct: 351 ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 3e-29
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 233 RNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY 292
A A+ AL P +V++GD S ++V +E+ GDIV V G++IP D +I
Sbjct: 40 GRASDALSALLALAPSTARVLQGDGS-EEEVPVEELQVGDIVIVRPGERIPVDGVVISGE 98
Query: 293 STTIRIDQSILTGESVSVIKHT-DAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
S +D+S LTGES+ V K D V F+GT G V G
Sbjct: 99 SE---VDESALTGESMPVEKKEGDEV--------------FAGTINGDGSLTIRVTKLGE 141
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
++ + +I + E + K P+Q+ D + I + + + +
Sbjct: 142 DSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGAL------- 194
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
GA+Y A+A+ V A P L + + A++ +++ ++E L +
Sbjct: 195 --GALYR---ALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTV 249
Query: 472 CSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFL 503
DKTGTLTT + +V + D S+ L
Sbjct: 250 VFDKTGTLTTGKPTVVDIEPLDDASISEEELL 281
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 6e-28
Identities = 126/541 (23%), Positives = 199/541 (36%), Gaps = 95/541 (17%)
Query: 247 PEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV--GDKIPADIRLIKIYSTTIRIDQSILT 304
P+ VIR K + + E+VPGDIV + +P D L+ S + +++S+LT
Sbjct: 228 PQSVIVIRNGKW--VTIASDELVPGDIVSIPRPEEKTMPCDSVLL---SGSCIVNESMLT 282
Query: 305 GESVSVIKH--TDAVPDPRAV---NQDKKNILFSGTNV-------AAGKARGIVMGTGLN 352
GESV V+K D D + KK++LF GT + IV+ TG +
Sbjct: 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342
Query: 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWI 412
T+ G++ +++ L K F I+ +AV A+ IG + I
Sbjct: 343 TSKGQL---------VRSILYPKPRVFKFYKDSFKFILFLAVLAL-IGF------IYTII 386
Query: 413 KGAVY----YFKIAVALAVAAI--PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLG 466
+ I +L + I P LPA ++ + R+ KK S + G
Sbjct: 387 ELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446
Query: 467 CTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIK 526
V C DKTGTLT + + + + S + +T + +
Sbjct: 447 KIDVCCFDKTGTLTEDGLDLRGVQGL-----SGNQEFLKIVTEDSSLKPSITHKALA--- 498
Query: 527 GADYETLHELGTICIMCNDSAI-DFNEFKQAFEKVGEA-TETALIVLAEKLNPFNVSKSG 584
T H L + + D + K FE G E + V
Sbjct: 499 -----TCHSLTKL----EGKLVGDPLDKK-MFEATGWTLEEDDESAEPTSILA-VVRTDD 547
Query: 585 LGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEG 644
+ I +FS + MS ++ S P FVKGAPE
Sbjct: 548 PPQELSIIRR-------------FQFSSALQRMSVIV---STNDERS--PDAFVKGAPET 589
Query: 645 VLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLAD 704
+ C+ + S + + TR+ R L LA L + A
Sbjct: 590 IQSLCSPETVPSD-------YQEVLKSYTRE------GYRVLALAY--KELPKLTLQKAQ 634
Query: 705 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 764
+ E NLTF+G + +P + + + I + A IR ++ITGDN TA + R G
Sbjct: 635 DLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECG 694
Query: 765 V 765
+
Sbjct: 695 I 695
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-24
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 97 FVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 156
V+ VILL+++ NA++G QE AE A+EALK+ KV+R K ++ A E+VP
Sbjct: 103 GVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGK--FVEIPASELVP 160
Query: 157 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPD 205
GDIV + GD +PAD+RL++ S+ + +D+S LTGES+ V K +
Sbjct: 161 GDIVLLEAGDVVPADLRLLE--SSDLEVDESALTGESLPVEKQALPLTK 207
|
Length = 917 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 2e-24
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 541 IMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVET 600
+CND+ NE K E +G+ TE+AL+V AEKL +++
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDV----------------EELRA 44
Query: 601 KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPK-LFVKGAPEGVLERCTH 651
++ + + F+ +RK MS+ KL LFVKGAPE +LERC+
Sbjct: 45 RYPRVAEIPFNSERKRMSTVH------KLEDDDGYRLFVKGAPERILERCST 90
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 2e-24
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 35/260 (13%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
A A++AL E P+ +V+RG +++V +E+ GD+V V G+++P D ++
Sbjct: 39 SGRARRALKALMELAPDTARVLRGG--SLEEVAVEELKVGDVVVVKPGERVPVDGVVLSG 96
Query: 292 YSTTIRIDQSILTGESVSVIKHT-DAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350
ST +D+S LTGESV V K D V A+N D G +V
Sbjct: 97 TST---VDESALTGESVPVEKAPGDEVFAG-AINLD-------------GVLTIVVTKLP 139
Query: 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGS 410
++ I KI + E + K Q+ +D F + V+ I +A+W +
Sbjct: 140 ADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLV-----------PG 188
Query: 411 WIKGAVYYFKIAVALAVAAIPEGLPAVITTCLAL--GTRRMAKKNAIVRSLPSVETLGCT 468
+K ++ A+ L V A P L VI+ A A+ +++ ++E L
Sbjct: 189 LLKRWPFWVYRALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKI 246
Query: 469 SVICSDKTGTLTTNQMSVSR 488
+ DKTGTLTT + V
Sbjct: 247 KTVAFDKTGTLTTGRPKVVD 266
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-23
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 233 RNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY 292
A AI AL + P+ V+RGD ++V +E+ GDIV V G++IP D ++
Sbjct: 196 GRARRAIRALLDLAPKTATVVRGDG-EEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254
Query: 293 STTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352
S+ +D+S+LTGES+ P + + +F+GT G V G +
Sbjct: 255 SS---VDESMLTGESL---------PVEKKPGDE----VFAGTVNLDGSLTIRVTRVGAD 298
Query: 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSK---VISIICVAVWAINIGHFNDPAHGG 409
T + +I + E + K P+Q+ D VI+ + A+W + G + A
Sbjct: 299 TTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETA--- 355
Query: 410 SWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLAL--GTRRMAKKNAIVRSLPSVETLGC 467
A+A+ V A P L + T A+ G R A++ +++ ++E L
Sbjct: 356 ---------LYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAK 404
Query: 468 TSVICSDKTGTLTTNQMSVSRMFIFDKIE 496
+ DKTGTLT + V+ + D E
Sbjct: 405 VDTVVFDKTGTLTEGKPEVTDVVALDGDE 433
|
Length = 713 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 4e-23
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMG-KVIRGDKSGVQKVRAKEIVPGDIV 160
+ILL+++ NA++ +QE A A++ALK+ P VIR K +++ A E+V GDIV
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGK--EEEIPADELVVGDIV 58
Query: 161 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTD 201
+ GD++PAD R+I ++ +D+S LTGES+ V K
Sbjct: 59 LLKPGDRVPADGRII---EGSLEVDESALTGESLPVEKSRG 96
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 6e-22
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 226 GRMVQL--ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIP 283
GR +++ + A A+ L + +P ++ D + V + + PGDIV V G+KIP
Sbjct: 67 GRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEE-VPVELLQPGDIVRVLPGEKIP 125
Query: 284 ADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKAR 343
D +I+ S +D+S++TGES+ V K + + +GT G
Sbjct: 126 VDGTVIEGESE---VDESLVTGESLPVPKKVG-------------DPVIAGTVNGTGSLV 169
Query: 344 GIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSK-------VISIICVAVWA 396
TG +T + +I + + ++ K P+Q+ ++++ I++I +W
Sbjct: 170 VRATATGEDTTLAQIVRLVRQAQQSKAPIQR----LADKVAGYFVPVVIAIALITFVIWL 225
Query: 397 INIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 456
I F V+ ++AV + + A P L T +A+ T AK ++
Sbjct: 226 ILGADF-------------VFALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLI 272
Query: 457 RSLPSVETLGCTSVICSDKTGTLTTNQMSV 486
+ ++E + DKTGTLT + +V
Sbjct: 273 KDGDALERAANIDTVVFDKTGTLTQGKPTV 302
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 99.7 bits (249), Expect = 1e-21
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYE--PEMGKVIRGDKSGVQKVRAKEIVPGDI 159
IL +++ ++ V Q+ AE + +L + V+R G +++ AK++VPGD+
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRN---GWKEIPAKDLVPGDV 57
Query: 160 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKN 211
V V G+ +PAD L S + +D+S LTGES V+K
Sbjct: 58 VLVKSGETVPADGVL---LSGSCFVDESNLTGESNPVLKTALKETQSGTITG 106
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 7e-21
Identities = 44/111 (39%), Positives = 70/111 (63%), Gaps = 4/111 (3%)
Query: 94 LTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKE 153
L ++V+ +IL +L+ NA +G +E A +A+EALK+ +V+R K Q++ A E
Sbjct: 52 LENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGK--WQEIPASE 109
Query: 154 IVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVP 204
+VPGD+V + +GD +PAD RL + I++DQ+ LTGES+ V K T +
Sbjct: 110 LVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESLPVTKKTGDIA 158
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 1e-20
Identities = 74/298 (24%), Positives = 122/298 (40%), Gaps = 67/298 (22%)
Query: 601 KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFP 660
+WKK + F DR+ +S + +L KGA E +L CTH R G
Sbjct: 405 RWKKVDEIPFDFDRRRLSVVVEN------RAEVTRLICKGAVEEMLTVCTHKRFGGAVVT 458
Query: 661 LTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGV 720
L+ + K+ + D+T + R +R + +AT + D D E L G
Sbjct: 459 LSESEKSELQDMTAEMN--RQGIRVIAVATKTLKVGEADFTKTD-------EEQLIIEGF 509
Query: 721 VGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAIC-------------------- 760
+G LDPP++ ++IA GI V V+TGDN+ IC
Sbjct: 510 LGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDANDFLLGADIEELS 569
Query: 761 -----------------------RRIGVFTEEEDTTG---------KSYSKAEIGIAMGS 788
R IG+ + T G + KA++GI++ +
Sbjct: 570 DEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629
Query: 789 GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAA 846
+AK AS+++L + + + V EGR + N+ ++++ SSN G V S+ + +A
Sbjct: 630 AADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASA 687
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 2e-17
Identities = 39/75 (52%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 779 KAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGE 837
KA+IG+AMG +G+ V+K A++M+L DDNF+SIV VEEGR I++N+K+ I Y ++SNI E
Sbjct: 701 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE 760
Query: 838 VVS--IFLTAALGLP 850
+ IF+ A + LP
Sbjct: 761 ITPFLIFIIANIPLP 775
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 2e-17
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 27/140 (19%)
Query: 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG---VFTE- 768
V+ VGV+ + D R + ++IA +A GI+V+++TGDN+ TAEAI + +G V E
Sbjct: 524 VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL 583
Query: 769 -EEDTTG------KSYSK----------------AEIGIAMGSGTAVAKSASEMVLADDN 805
ED K A++GIAMGSGT VA A+++VL D+
Sbjct: 584 LPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDD 643
Query: 806 FSSIVAAVEEGRAIYNNMKQ 825
S++ A++ RA +KQ
Sbjct: 644 LSAVPEAIDLSRATRRIIKQ 663
|
Length = 713 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 85.5 bits (212), Expect = 7e-17
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 595 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI 654
+ + ++W+K + F +R+ MS + +L KGA E +L C+ R
Sbjct: 434 ARSLASRWQKIDEIPFDFERRRMSVVV------AENTEHHQLICKGALEEILNVCSQVRH 487
Query: 655 GSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVN 714
+ PL + RI +T R LR + +AT P + D AD E +
Sbjct: 488 NGEIVPLDDIMLRRIKRVTDTLN--RQGLRVVAVATKYLPAREGDYQRAD-------ESD 538
Query: 715 LTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765
L G + LDPP++ ++ +A+G+ V ++TGD++ A +C +G+
Sbjct: 539 LILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL 589
|
Length = 902 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 82.0 bits (202), Expect = 1e-15
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 94 LTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKE 153
+ ++E VI I+ N ++G QE AE +++LK M VIR KS + + +
Sbjct: 78 MHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS--DAIDSHD 135
Query: 154 IVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAV 203
+VPGDI + GD IPAD+RLI+ + D+++LTGES+ VIK A
Sbjct: 136 LVPGDICLLKTGDTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHAT 183
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 2e-15
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIR---GDKSGVQ-KVRAKEIVPG 157
+I L+++A+ ++G QE AE A ALK V+R + +G +V +VPG
Sbjct: 93 IIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPG 152
Query: 158 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCE 217
D++E++ GD IPAD R+I + + I+QS LTGES+ V K V D RA E
Sbjct: 153 DLIELAAGDIIPADARVIS--ARDLFINQSALTGESLPVEKF---VEDKRARDPEILERE 207
Query: 218 N 218
N
Sbjct: 208 N 208
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 2e-15
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 53/275 (19%)
Query: 235 AESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYST 294
A + AL PE +R + ++V ++ PGD++EV+ G ++PAD +L+ S
Sbjct: 230 ARRGVSALMALVPETATRLRDGER--EEVAIADLRPGDVIEVAAGGRLPADGKLL---SP 284
Query: 295 TIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGK------ARGIVMG 348
D+S LTGES+ V + T G V AG V+
Sbjct: 285 FASFDESALTGESIPVERAT-------------------GEKVPAGATSVDRLVTLEVLS 325
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
+AI +I + E EE + P+++ +D F + I ++ + V + F P
Sbjct: 326 EPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQ- 384
Query: 409 GSWI-KGAVYYFKIAVALAVAAIPEGL----PAVITTCLALGTRRMA--KKNAIVRSLPS 461
WI +G + L + P L PA IT+ LA RR A K A + L
Sbjct: 385 -EWIYRG--------LTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGR 435
Query: 462 VETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIE 496
V T + DKTGTLT + V+ + I
Sbjct: 436 VTT------VAFDKTGTLTEGKPQVTDIHPATGIS 464
|
Length = 741 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 2e-14
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 26/149 (17%)
Query: 78 PQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI----------------------VGV 115
+ E+ + L+ FV+ +ILL++ + I VG
Sbjct: 39 WNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMGNIDDAVSITLAILIVVTVGF 98
Query: 116 WQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 175
QE +E ++EAL + P +IR K + V A +VPGD+V +SVGD++PAD+R++
Sbjct: 99 VQEYRSEKSLEALNKLVPPECHLIREGKL--EHVLASTLVPGDLVCLSVGDRVPADLRIV 156
Query: 176 KIYSTTIRIDQSILTGESVSVIKHTDAVP 204
+ + + ID+S LTGE+ V K T +P
Sbjct: 157 E--AVDLSIDESNLTGETTPVSKVTAPIP 183
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 2e-14
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 636 LFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPL 695
L KGA E +L TH R G PL + R+L L Y D R L +AT + P
Sbjct: 467 LICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYN--ADGFRVLLVATREIPG 524
Query: 696 KPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 755
+ + E +L G + LDPP++ +IA R G+ V V+TGDN
Sbjct: 525 GESRAQYS-----TADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIV 579
Query: 756 AEAICRRIG 764
ICR +G
Sbjct: 580 TAKICREVG 588
|
Length = 903 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 2e-13
Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVR----AKEIVPG 157
+IL +++ + ++ WQE + A EALK V+R +G + VR +E+VPG
Sbjct: 116 IILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPG 175
Query: 158 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCE 217
DIV +S GD IPAD+RLI+ S + I Q++LTGE++ V K+ D + A K+ + +
Sbjct: 176 DIVHLSAGDMIPADVRLIE--SRDLFISQAVLTGEALPVEKY-DTLGAV-AGKSADALAD 231
Query: 218 NDRN 221
++ +
Sbjct: 232 DEGS 235
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 2e-13
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 35/175 (20%)
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIAR-CRAAGIRVIVITGDNKATAEAICRRIGV-- 765
V+ +GV+ + D R E ++IA RA GI+++++TGDN++ AEA+ +G+
Sbjct: 367 VFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE 426
Query: 766 ----------------FTEEEDTTG---------KSYSKAEIGIAMGSGTAVAKSASEMV 800
EE + + A++GIAMG+G+ VA A+++V
Sbjct: 427 VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIV 486
Query: 801 LADDNFSSIVAAVEEGRAIYNNMKQ-------FIRYLISSNIGEVVSIFLTAALG 848
L +D+ SS+ A++ R +KQ + I G ++ ++L A L
Sbjct: 487 LLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLL 541
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-12
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 99 EPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 158
E ++L + + + + A A+ AL P +V++GD S ++V +E+ GD
Sbjct: 20 EGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGS-EEEVPVEELQVGD 78
Query: 159 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 198
IV V G++IP D +I S +D+S LTGES+ V K
Sbjct: 79 IVIVRPGERIPVDGVVISGESE---VDESALTGESMPVEK 115
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 1e-11
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 27/141 (19%)
Query: 712 EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT---- 767
VN GV+ + D + E + I + GI +++TGDN+ TA+A+ + +G+
Sbjct: 400 AVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIENVRAE 459
Query: 768 ----EEEDTTGKSYSK-------------------AEIGIAMGSGTAVAKSASEMVLADD 804
++ K K A++GIA+G+GT VA A+++VL +
Sbjct: 460 VLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRN 519
Query: 805 NFSSIVAAVEEGRAIYNNMKQ 825
+ + + A++ R +KQ
Sbjct: 520 DLNDVATAIDLSRKTLRRIKQ 540
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 3e-11
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 91/293 (31%)
Query: 638 VKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL-TRQYGTGRDTLRCLGLATADNPLK 696
KGAP+ +L+ C K + ++ ++ +L +R Y R LG+A D
Sbjct: 384 TKGAPQVILDLC------DNKKEIEEKVEEKVDELASRGY-------RALGVARTD---- 426
Query: 697 PEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATA 756
+ + F+G++ + DPPR + ++I R R G+ V ++TGD+ A A
Sbjct: 427 ----------EEGRWH----FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIA 472
Query: 757 EAICRRIG------------------------------------VFTEEEDTTGKSYSKA 780
+ RR+G VF E + + K
Sbjct: 473 KETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQKR 532
Query: 781 EIGIAM-GSGT-------------AVA------KSASEMVLADDNFSSIVAAVEEGRAIY 820
+ M G G AVA +SA+++VL + S IV A+ E R I+
Sbjct: 533 GHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIF 592
Query: 821 NNMKQFIRYLISSNIGEVVSIFLTAAL---GLPEALIKKISTTNRGKKKKLSY 870
MK ++ Y I+ I V L + P ++ I+ N G ++Y
Sbjct: 593 QRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMTIAY 645
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 4e-11
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIR-GDKSGVQKVRAKEIVPGDIV 160
V+ ++I +QE + +E+ K P+ VIR G+K + A+++V GD+V
Sbjct: 109 VLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK---MSINAEQVVVGDLV 165
Query: 161 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193
EV GD+IPAD+R+I + ++D S LTGES
Sbjct: 166 EVKGGDRIPADLRIIS--AQGCKVDNSSLTGES 196
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 5e-11
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVE 161
++LL+ + + A A++AL E P+ +V+RG +++V +E+ GD+V
Sbjct: 23 LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGG--SLEEVAVEELKVGDVVV 80
Query: 162 VSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 198
V G+++P D ++ ST +D+S LTGESV V K
Sbjct: 81 VKPGERVPVDGVVLSGTST---VDESALTGESVPVEK 114
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 5e-11
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 101 FVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIV 160
+I L L+ + + A AI AL + P+ V+RGD ++V +E+ GDIV
Sbjct: 179 MLIFLFLLGRYL-EARAKGRARRAIRALLDLAPKTATVVRGDG-EEEEVPVEEVQVGDIV 236
Query: 161 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 198
V G++IP D ++ S+ +D+S+LTGES+ V K
Sbjct: 237 LVRPGERIPVDGVVVSGSSS---VDESMLTGESLPVEK 271
|
Length = 713 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 1e-10
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 30/171 (17%)
Query: 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGI-RVIVITGDNKATAEAICRRIGV------ 765
+ T++G + + D PR + ++IA +A GI +V+++TGD +A AE + R +G+
Sbjct: 349 RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAE 408
Query: 766 ------------FTEEEDTTG---------KSYSKAEIGIAMG-SGTAVAKSASEMVLAD 803
E+ + + A++GIAMG SG+ VA +++VL +
Sbjct: 409 LLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLN 468
Query: 804 DNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALI 854
D+ S + A+ R +KQ + + I ++ + L L L A++
Sbjct: 469 DDLSRLPQAIRLARRTRRIVKQNVVIALGI-ILLLILLALFGVLPLWLAVL 518
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 1e-10
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 30/257 (11%)
Query: 232 ERNAESAIEALKEYEPEM-GKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK 290
E ++ AL++ + EM + I+ D S + + A ++ G IV V+ G++IP D ++IK
Sbjct: 87 EGRGKAQANALRQTQTEMKARRIKQDGS-YEMIDASDLKKGHIVRVATGEQIPNDGKVIK 145
Query: 291 IYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350
+T +D+S +TGES VIK + D N++ GT+VA+ +
Sbjct: 146 GLAT---VDESAITGESAPVIKESGG---------DFDNVI-GGTSVASDWLEVEITSEP 192
Query: 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAI-NIGHFNDPAHGG 409
++ + K+ + KTP + L L+ + ++ + ++ + +FN
Sbjct: 193 GHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFN------ 246
Query: 410 SWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTS 469
+ +ALAV IP + +++ G R+ + N + +S SVET G +
Sbjct: 247 -------LSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVN 299
Query: 470 VICSDKTGTLT-TNQMS 485
V+ DKTGT+T N+M+
Sbjct: 300 VLILDKTGTITYGNRMA 316
|
Length = 673 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-10
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 11/122 (9%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGD----KSGVQKVRAKEIVPG 157
VI L++ + ++ QE + A +ALK V+R ++G ++ ++VPG
Sbjct: 127 VIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPG 186
Query: 158 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPR-AEKNGPQMC 216
DI++++ GD IPAD+R+++ + + + Q+ LTGES+ V K R E + P C
Sbjct: 187 DIIKLAAGDMIPADLRILQ--ARDLFVAQASLTGESLPVEK----FATTRQPEHSNPLEC 240
Query: 217 EN 218
+
Sbjct: 241 DT 242
|
Length = 902 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 2e-10
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 97 FVEPFVILLILIANAIVGVWQERNAES----AIEALKEYEPEMGKVIRGDKSGVQKVRAK 152
F + +L+ I +G W E A+ A+ L + +P ++ D + V +
Sbjct: 53 FFDASAMLITFIL---LGRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEIEE-VPVE 108
Query: 153 EIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTD 201
+ PGDIV V G+KIP D +I+ S +D+S++TGES+ V K
Sbjct: 109 LLQPGDIVRVLPGEKIPVDGTVIEGESE---VDESLVTGESLPVPKKVG 154
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 1e-09
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 25/249 (10%)
Query: 232 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKI 291
E ++ ++LK + + D + KV A ++ GDIV V GD IP D +I+
Sbjct: 88 EGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 292 YSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351
++ +D+S +TGES VIK + D +V GT + +
Sbjct: 148 VAS---VDESAITGESAPVIKESGG--DFASVT--------GGTRILSDWLVVECTANPG 194
Query: 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW 411
T + ++ + + KTP + L L+ V ++ +W A+GG+
Sbjct: 195 ETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFA-------AYGGNA 247
Query: 412 IKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 471
I + VAL V IP + +++ G R+ N I S +VE G +
Sbjct: 248 IS-----VTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTL 302
Query: 472 CSDKTGTLT 480
DKTGT+T
Sbjct: 303 LLDKTGTIT 311
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 7e-09
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 31/193 (16%)
Query: 719 GVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV--FTEE------- 769
GV+ + D + + + A+ R GI+ I+ITGDN+ TA AI GV F E
Sbjct: 439 GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKI 498
Query: 770 -----EDTTGK-------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVA 811
E GK + ++A++G+AM SGT AK A+ MV D + + ++
Sbjct: 499 ALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIE 558
Query: 812 AVEEGRAIYNNMKQFIRYLISSNIGE----VVSIFLTAALGLPEALIKKISTTNRGKKKK 867
V G+ + + I++++ + + +IF A L I + + +
Sbjct: 559 VVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAILSA 618
Query: 868 LSYNFLDISLLGP 880
L +N L I L P
Sbjct: 619 LIFNALIIPALIP 631
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 8e-09
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVE 161
V+LL LI + G + A + AL PE +R + ++V ++ PGD++E
Sbjct: 212 VLLLFLIGERLEG-YAASRARRGVSALMALVPETATRLRDGER--EEVAIADLRPGDVIE 268
Query: 162 VSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHT-DAVP 204
V+ G ++PAD +L+ S D+S LTGES+ V + T + VP
Sbjct: 269 VAAGGRLPADGKLL---SPFASFDESALTGESIPVERATGEKVP 309
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 8e-09
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 44/158 (27%)
Query: 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTG---------- 774
DP R + ++ R AG R++++TGDN TA AI + G+ +E G
Sbjct: 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI---DEVIAGVLPDGKAEAI 705
Query: 775 --------------------KSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814
+ ++A++GIAMG G+ VA + + L + + A+
Sbjct: 706 KRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALA 765
Query: 815 EGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEA 852
RA NMKQ ++ F+ +LG+P A
Sbjct: 766 ISRATLRNMKQ-----------NLLGAFIYNSLGIPIA 792
|
Length = 834 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 4e-08
Identities = 81/350 (23%), Positives = 132/350 (37%), Gaps = 74/350 (21%)
Query: 454 AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFI--------FDKIE-------GS 498
A VR+ E LG I SDKTGTLT N M + I F +I+ GS
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS 404
Query: 499 DSSFLEFEI-TGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAF 557
+ + + ++ K + + ++E +C+ +FN+
Sbjct: 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFND-DGPE 463
Query: 558 EKVGEAT---ETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEF----TLEF 610
E +A E AL+ A +V R ++I++ + KE+ LEF
Sbjct: 464 EITYQAASPDEAALVKAAR-----DVGFVFFERTPKSISLLIE-MHGETKEYEILNVLEF 517
Query: 611 SRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRIL 670
+ DRK MS + KL KGA + +R ++ N++
Sbjct: 518 NSDRKRMSVIV------RNPDGRIKLLCKGADTVIFKR-------------LSSGGNQVN 558
Query: 671 DLTR----QYGTGRDTLRCLGLATADNPLKPED-------MNLADST---------KFAS 710
+ T+ Y + LR L +A + L E+ N A + A
Sbjct: 559 EETKEHLENY--ASEGLRTLCIAYRE--LSEEEYEEWNEEYNEASTALTDREEKLDVVAE 614
Query: 711 Y-EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI 759
E +L +G + D ++ V ++I R AGI++ V+TGD TA I
Sbjct: 615 SIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINI 664
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 1e-07
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 717 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV----------- 765
+GV+ + D + + + A R GI+ ++ITGDN TA AI GV
Sbjct: 438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAEATPED 497
Query: 766 ---FTEEEDTTGK-------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSI 809
+E G+ + ++A++G+AM SGT AK A+ MV D N + +
Sbjct: 498 KLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKL 557
Query: 810 VAAVEEGRAI 819
+ VE G+ +
Sbjct: 558 IEVVEIGKQL 567
|
Length = 681 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 1e-07
Identities = 64/260 (24%), Positives = 102/260 (39%), Gaps = 68/260 (26%)
Query: 249 MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308
+ +++R D S ++ V A E+ GDIV V G+ IP+D +I+ ++ +D+S +TGES
Sbjct: 105 IARLLRADGS-IEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESAITGESA 160
Query: 309 SVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIR--TEMSET- 365
VI+ SG + ++ + GT + + KIR ET
Sbjct: 161 PVIRE-------------------SGGDFSS-----VTGGTRVLSDWLKIRITANPGETF 196
Query: 366 -----------EEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKG 414
E KTP + L L+ + + ++ + G
Sbjct: 197 LDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPF-----------AIYSGG 245
Query: 415 AVYYFKIAVALAVAAIPEGLPAVITTCLAL-------GTRRMAKKNAIVRSLPSVETLGC 467
+ VAL V IP TT L G R+ + N I S +VE G
Sbjct: 246 GAASVTVLVALLVCLIP-------TTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGD 298
Query: 468 TSVICSDKTGTLTT-NQMSV 486
+ DKTGT+T N+ +
Sbjct: 299 VDTLLLDKTGTITLGNRQAS 318
|
Length = 681 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 6e-07
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 41/159 (25%)
Query: 716 TFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV---------- 765
+G++ + D R + +I+ +A GI+ +++TGDN A AI +G+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAGLLPED 617
Query: 766 -------FTEEEDTT--------GKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIV 810
+ + A IGIAMGSGT VA ++ L + +
Sbjct: 618 KVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLA 677
Query: 811 AAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGL 849
+E RA + N++Q NI T ALGL
Sbjct: 678 QMIELSRATHANIRQ--------NI--------TIALGL 700
|
Length = 741 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 1e-06
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 80 VLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEAL-KEYEPEMGKV 138
VL L E E T T ++E IL+ +I +V + E L +E + V
Sbjct: 112 VLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAV 171
Query: 139 IRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193
IRG + Q++ +IV GDIV +S GD +PAD I S + ID+S +TGES
Sbjct: 172 IRGGQ--EQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS--LEIDESSITGES 222
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 1e-06
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 31/215 (14%)
Query: 714 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV-------- 765
+ +GV+ + D + + + R GI ++ TGDN+ TA I + GV
Sbjct: 429 DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAECK 488
Query: 766 ------FTEEEDTTGK-------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806
EE G + ++A +G+AM SGT AK A+ ++ D N
Sbjct: 489 PEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNP 548
Query: 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSI----FLTAALGLPEALIKKISTTNR 862
+ ++ V G+ + + I+++I + +I F+ A + I + +
Sbjct: 549 TKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPES 608
Query: 863 GKKKKLSYNFLDISLLGPAIHYQVDLTGGPDQVYL 897
L +N L I LL P V G Q L
Sbjct: 609 AVLSALIFNALIIVLLIPIAMKGVKFKGASTQTIL 643
|
Length = 673 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 1e-06
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 33/130 (25%)
Query: 717 FVGVVGMLD---PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV------FT 767
+GV+ + D P KE F + R GI+ ++ITGDN TA AI GV T
Sbjct: 436 VLGVIYLKDIVKPGIKERFAEL---RKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEAT 492
Query: 768 EE--------EDTTGK-------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806
E E G+ + ++A++G+AM SGT AK A MV D N
Sbjct: 493 PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNP 552
Query: 807 SSIVAAVEEG 816
+ ++ VE G
Sbjct: 553 TKLIEVVEIG 562
|
Length = 679 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 4e-06
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 103 ILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEV 162
I+ + + + V+Q R + + ++P+ VIR K + + E+VPGDIV +
Sbjct: 199 IVFMSSTSISLSVYQIRKQMQRLRDMV-HKPQSVIVIRNGKW--VTIASDELVPGDIVSI 255
Query: 163 SV--GDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDR 220
+P D L+ S + +++S+LTGESV V+K +PD + + E +
Sbjct: 256 PRPEEKTMPCDSVLL---SGSCIVNESMLTGESVPVLK--FPIPDNGDDDEDLFLYETSK 310
Query: 221 N 221
Sbjct: 311 K 311
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 5e-06
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 101 FVILLILIANAIVGVWQERNAESAIEALKEYEPEM-GKVIRGDKSGVQKVRAKEIVPGDI 159
++LL L+ E ++ AL++ + EM + I+ D S + + A ++ G I
Sbjct: 70 IILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGS-YEMIDASDLKKGHI 128
Query: 160 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHT 200
V V+ G++IP D ++IK +T +D+S +TGES VIK +
Sbjct: 129 VRVATGEQIPNDGKVIKGLAT---VDESAITGESAPVIKES 166
|
Length = 673 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-05
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 780 AEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV 839
A+IGI++ +A+ A++++L + + + V EGR + NM ++I+ SSN G V
Sbjct: 656 ADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVF 715
Query: 840 SIFLTAALGLP 850
S+ + +A LP
Sbjct: 716 SVLVASAF-LP 725
|
Length = 902 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 3e-05
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 135 MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK-IYSTTIRIDQSILTGES 193
+ +R + ++V A E+ GDIV V G+ IPAD +I+ + S +D+S +TGES
Sbjct: 105 FARKLREPGA-AEEVPATELRKGDIVLVEAGEIIPADGEVIEGVAS----VDESAITGES 159
Query: 194 VSVIK 198
VI+
Sbjct: 160 APVIR 164
|
Length = 679 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 3e-05
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 249 MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK-IYSTTIRIDQSILTGES 307
+ +R + ++V A E+ GDIV V G+ IPAD +I+ + S +D+S +TGES
Sbjct: 105 FARKLREPGA-AEEVPATELRKGDIVLVEAGEIIPADGEVIEGVAS----VDESAITGES 159
Query: 308 VSVIK 312
VI+
Sbjct: 160 APVIR 164
|
Length = 679 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 7e-05
Identities = 90/350 (25%), Positives = 134/350 (38%), Gaps = 79/350 (22%)
Query: 457 RSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIF-----DKIEGSDSSFLEF--EITG 509
R+L E LG + SDKTGTLT N+M I+ D + + + E+ G
Sbjct: 442 RALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDG 501
Query: 510 STYEP-----IGDVFLNGSKIKGADYET---LHELGTICIMCN-----------DSAIDF 550
P + L SK G D E +H+ CN D +
Sbjct: 502 KILRPKMKVKVDPQLLELSK-SGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKL 560
Query: 551 NEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTL-E 609
+++ GE+ + +V A F + + R I + E + L E
Sbjct: 561 MDYQ------GESPDEQALVYAAAAYGFMLIE----RTSGHIVIDIHGERQRFNVLGLHE 610
Query: 610 FSRDRKSMSSYCTPLKSSKLG--SSGPKLFVKGAPE---GVLERCTHARIGSQKFPLTAT 664
F DRK MS LG K+FVKGA V++R + + + AT
Sbjct: 611 FDSDRKRMSVI--------LGCPDKTVKVFVKGADTSMFSVIDRSLNMNV------IRAT 656
Query: 665 LKNRILDLTRQYGTGRDTLRCLGLATAD-NPLKPEDMNL---ADST----------KFAS 710
+ Y + LR L + + N + E + A ST K AS
Sbjct: 657 EAH-----LHTYSS--LGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVAS 709
Query: 711 -YEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAI 759
E NLT +G + D ++ V ++I R AGI+V V+TGD + TA +I
Sbjct: 710 NVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 2e-04
Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 34/264 (12%)
Query: 237 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTI 296
A+E L + P +V+ + G + V ++ PG ++ ++ GD++P D +I
Sbjct: 312 KALEKLLDLTPPTARVVTDE--GEKSVPLADVQPGMLLRLTTGDRVPVD---GEITQGEA 366
Query: 297 RIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG----KARGIVMGTGLN 352
+D+++LTGE +P + + + +GT V G +A + T L+
Sbjct: 367 WLDEAMLTGE---------PIPQQKGEG----DSVHAGTVVQDGSVLFRASAVGSHTTLS 413
Query: 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWI 412
I +R S EI L K+ + VI+++ A+W +F PA
Sbjct: 414 RIIRMVRQAQSSKPEIGQ-LADKISAVFVPVVVVIALVSAAIW-----YFFGPA------ 461
Query: 413 KGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 472
VY IA + + A P L + G R A+ +VR +++ +
Sbjct: 462 PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLV 521
Query: 473 SDKTGTLTTNQMSVSRMFIFDKIE 496
DKTGTLT + V + F+ ++
Sbjct: 522 FDKTGTLTEGKPQVVAVKTFNGVD 545
|
Length = 834 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 3e-04
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 718 VGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766
+G++ + DP +++ + AGI++ ++TGDN+ TA AI R +G+F
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLF 134
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 135 MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194
+ +++R D S ++ V A E+ GDIV V G+ IP+D +I+ ++ +D+S +TGES
Sbjct: 105 IARLLRADGS-IEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESAITGESA 160
Query: 195 SVIK 198
VI+
Sbjct: 161 PVIR 164
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 7e-04
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 106 ILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVG 165
+L AN V + R A ++LK + + D + KV A ++ GDIV V G
Sbjct: 77 VLFANFAEAVAEGRGKAQA-DSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAG 135
Query: 166 DKIPADIRLIKIYSTTIRIDQSILTGESVSVIK 198
D IP D +I+ ++ +D+S +TGES VIK
Sbjct: 136 DVIPCDGEVIEGVAS---VDESAITGESAPVIK 165
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 19/109 (17%), Positives = 48/109 (44%), Gaps = 24/109 (22%)
Query: 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG-------VFTEEEDTTGK--- 775
P +V + + R +A G+++++++ ++ E + ++G VFT ++ K
Sbjct: 77 EPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKLGLLDLFDAVFTSDDVGARKPDP 136
Query: 776 -SYSKA--EIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEG-RAIY 820
+Y + +G+ E++ DD+ + AA G + ++
Sbjct: 137 EAYERVLERLGLP----------PEEILFIDDSPEDLEAARAAGIKTVH 175
|
Length = 176 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 962 | |||
| KOG0202|consensus | 972 | 100.0 | ||
| KOG0204|consensus | 1034 | 100.0 | ||
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0203|consensus | 1019 | 100.0 | ||
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207|consensus | 951 | 100.0 | ||
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0208|consensus | 1140 | 100.0 | ||
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| KOG0205|consensus | 942 | 100.0 | ||
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0206|consensus | 1151 | 100.0 | ||
| KOG0210|consensus | 1051 | 100.0 | ||
| KOG0209|consensus | 1160 | 100.0 | ||
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.65 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 99.59 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.59 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 99.55 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 99.53 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 99.51 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.48 | |
| KOG0203|consensus | 1019 | 99.46 | ||
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 99.46 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 99.45 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 99.44 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 99.42 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 99.42 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.35 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 99.33 | |
| KOG0207|consensus | 951 | 99.33 | ||
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 99.32 | |
| KOG0208|consensus | 1140 | 99.28 | ||
| KOG0202|consensus | 972 | 99.28 | ||
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 99.19 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 99.13 | |
| KOG0205|consensus | 942 | 99.11 | ||
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 99.09 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 99.03 | |
| KOG4383|consensus | 1354 | 98.94 | ||
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 98.91 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 98.73 | |
| KOG0209|consensus | 1160 | 98.66 | ||
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.61 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 98.56 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.53 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.47 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.41 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 98.21 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.16 | |
| KOG0204|consensus | 1034 | 97.38 | ||
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 97.02 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 96.77 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 96.0 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 95.81 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 95.34 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 94.27 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 94.26 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 94.16 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 93.38 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 93.37 | |
| KOG0210|consensus | 1051 | 93.25 | ||
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 93.04 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 92.92 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 92.38 | |
| KOG0206|consensus | 1151 | 91.37 | ||
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 90.99 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 89.73 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 89.63 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 89.03 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 88.71 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 88.44 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 88.06 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 86.96 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 86.75 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 86.64 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 86.34 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 86.31 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 84.33 | |
| PLN02954 | 224 | phosphoserine phosphatase | 84.17 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 83.92 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 83.6 | |
| PLN02887 | 580 | hydrolase family protein | 82.74 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 81.17 |
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-150 Score=1260.08 Aligned_cols=772 Identities=56% Similarity=0.820 Sum_probs=663.1
Q ss_pred HHHhhhhhhccCccccCCC---ChhHHHHHHHH----HHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSP---SENVHIASTNF----AVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
.+..++..||.|.+..... |...++++.+. +++++++++++. .|.+++.|.++++++..+
T Consensus 28 ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------------~~~e~~vI~liiv~nvtV 94 (972)
T KOG0202|consen 28 EVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA-------------DFDEPFVITLIIVINVTV 94 (972)
T ss_pred HHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-------------hcccceeeeeeeeeeeee
Confidence 5777888999999864443 45555554444 344444444433 356778888888888888
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
++|||+|+++++++|+++.|+.++|+|+|+
T Consensus 95 G~~QEy~aEkalEaLk~l~p~~~~V~R~gk-------------------------------------------------- 124 (972)
T KOG0202|consen 95 GFVQEYNAEKALEALKELVPPMAHVLRSGK-------------------------------------------------- 124 (972)
T ss_pred eeeeehhhHHHHHHHHhcCCccceEEecCc--------------------------------------------------
Confidence 888888888888888877777777777775
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
.+.+++++||||||
T Consensus 125 ------------------------------------------------------------------~~~i~A~eLVPGDi 138 (972)
T KOG0202|consen 125 ------------------------------------------------------------------LQHILARELVPGDI 138 (972)
T ss_pred ------------------------------------------------------------------ccceehhccCCCCE
Confidence 35667777777777
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCC-CCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVP-DPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~-~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
|.++-||+||||.||++ ..++.+|||+|||||.|+.|.....+ ++.....+++|++|+||.|..|+++|+|+.||.+
T Consensus 139 V~l~vGDkVPADlRl~e--~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~n 216 (972)
T KOG0202|consen 139 VELKVGDKIPADLRLIE--AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLN 216 (972)
T ss_pred EEEecCCccccceeEEe--eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEecccc
Confidence 77777777777777776 34599999999999999999998888 7778889999999999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|++|||.+++++.+..+||||++++.+++.+..++.++|+.+|++.++++..+.+++.|++...++|.++++|+|++|||
T Consensus 217 TeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 217 TEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred chHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999988889889999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
|||+++|+++++|.+||+|++++||+++++|+||++++||+|||||||+|+|++.++|+.+..+... .++.+++.+|
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~---~~f~~tg~ty 373 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV---DEFNPTGTTY 373 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc---cccccCCcee
Confidence 9999999999999999999999999999999999999999999999999999999999988765433 6788899999
Q ss_pred ccCcceecCCCccC--CCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhH
Q psy886 513 EPIGDVFLNGSKIK--GADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQ 590 (962)
Q Consensus 513 ~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~ 590 (962)
+|.+....+..... ....+.+.+++.++++||++.++.+.. +.|+..|+|||.||..+++|.|+........+..+
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~- 451 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEE- 451 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccccc-
Confidence 99998877664333 455678999999999999999988776 78888999999999999999998765533444444
Q ss_pred HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCC--eeeeCCHHHHHH
Q psy886 591 AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGS--QKFPLTATLKNR 668 (962)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~--~~~~l~~~~~~~ 668 (962)
...++....+.|++++++||||+||+|||++.+..+. .++.+|+|||+|.|+++|++++.++ ...|+++..|+.
T Consensus 452 ~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~----~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~ 527 (972)
T KOG0202|consen 452 ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ----SGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRET 527 (972)
T ss_pred cccchhHHHHhhhheeEeecccccceEEEEEecCCCC----ccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHH
Confidence 4455556677788899999999999999999865432 3679999999999999998877643 569999999999
Q ss_pred HHHHHHHHhcccchhheeeEEeeeCCC-CccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEE
Q psy886 669 ILDLTRQYGTGRDTLRCLGLATADNPL-KPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIV 747 (962)
Q Consensus 669 i~~~~~~~~~~~~glRvl~~A~~~~~~-~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~M 747 (962)
+++...+|+ ++||||||+|+++.+. .+++....+...+..+|.||+|+|++||.||||+||+++|+.|++|||||+|
T Consensus 528 il~~~~~~g--~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~m 605 (972)
T KOG0202|consen 528 ILANVYEMG--SEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIM 605 (972)
T ss_pred HHHHHHHHh--hccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEE
Confidence 999999996 9999999999998873 4455556667778889999999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCcc-----ccCCCC---------------------------------------------
Q psy886 748 ITGDNKATAEAICRRIGVFTEEED-----TTGKSY--------------------------------------------- 777 (962)
Q Consensus 748 iTGD~~~TA~~IA~~~GI~~~~~~-----~~g~~l--------------------------------------------- 777 (962)
|||||++||.+|||++||+..++. .+|+++
T Consensus 606 ITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGD 685 (972)
T KOG0202|consen 606 ITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGD 685 (972)
T ss_pred EcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCC
Confidence 999999999999999999876542 344433
Q ss_pred --------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Q psy886 778 --------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALG 848 (962)
Q Consensus 778 --------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 848 (962)
++|||||||| +|||||||||||||.||||++|+.||+|||.+|+|||+|++|+|++|+++++++++++.||
T Consensus 686 GVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~ 765 (972)
T KOG0202|consen 686 GVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG 765 (972)
T ss_pred CccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC
Confidence 5999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhHH-H----hhCcccccccccCCCCcCccchh------------HHHHHHHHhhhH-----Hh----hhcCCCc
Q psy886 849 LPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA------------IHYQVDLTGGPD-----QV----YLSGLPD 902 (962)
Q Consensus 849 ~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p------------~~~~~~~~~~~~-----~~----~~~~~~~ 902 (962)
+|.||+|+| | +||++||.+||+|||++|+|+|| ++.|++.+|... .. |...++.
T Consensus 766 ~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~ 845 (972)
T KOG0202|consen 766 IPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGK 845 (972)
T ss_pred CCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCC
Confidence 999999999 4 99999999999999999999998 488888888621 11 1111222
Q ss_pred EEEeccchhhhhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 903 SIYYLPTTVFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
.+| .++.|+..|-. .|.+.+|..|....+.||+|++||+++|||+|||||++
T Consensus 846 vt~-----~~~~~~~~c~~---~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~ 897 (972)
T KOG0202|consen 846 VTY-----RQLAHYNSCCR---DFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSEN 897 (972)
T ss_pred cCh-----hhhcchhhhcc---cccccchhhhcccccceEEEeehhHHHHHHHhhcccCC
Confidence 233 37888888864 67788899999999999999999999999999999985
|
|
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-122 Score=1036.86 Aligned_cols=717 Identities=29% Similarity=0.384 Sum_probs=563.0
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||.|.++.+.+..+++.. ...++.+++++++.+.+|..+. ...|+++..|++.+++..+
T Consensus 123 ~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~-----~~GW~eG~aI~~sV~~VV~ 197 (1034)
T KOG0204|consen 123 DELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGI-----EDGWIEGVAILLSVILVVL 197 (1034)
T ss_pred HHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCC-----CcccccchhheeeEEEEEE
Confidence 457778889999999998887777665 3455667777777777665432 2367888887776666667
Q ss_pred HHHHHHHHHHHHHHHHhccC-CCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccC
Q psy886 113 VGVWQERNAESAIEALKEYE-PEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 191 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~-~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTG 191 (962)
+....+++.+++.++|.+.. .....|+|||+ .++|+..||+||||+.|+.||.+||||++++
T Consensus 198 VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~--r~~isI~diVVGDIv~lk~GDqvPADGvli~--------------- 260 (1034)
T KOG0204|consen 198 VTAVNDYRQELQFRKLQKEKRNIKFQVIRGGR--RQQISIYDLVVGDIVQLKIGDQVPADGVLIQ--------------- 260 (1034)
T ss_pred EeecchhHHhhhhhhhhhhhhceEEEEEECCE--EEEEEEeeeeeccEEEeecCCccccceEEEe---------------
Confidence 77777788888888887644 44788888887 4666666666666666666666666666663
Q ss_pred CCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC
Q psy886 192 ESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 271 (962)
Q Consensus 192 Es~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G 271 (962)
T Consensus 261 -------------------------------------------------------------------------------- 260 (1034)
T KOG0204|consen 261 -------------------------------------------------------------------------------- 260 (1034)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEecc
Q psy886 272 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 272 DIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
+++|.+|||+|||||+++.|... .++++++||++.+|+++++|+++|+
T Consensus 261 ---------------------gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGm 308 (1034)
T KOG0204|consen 261 ---------------------GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGM 308 (1034)
T ss_pred ---------------------ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeee
Confidence 34667788888888888777653 3579999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC---CCCC---Ccc----hHHHHHHHHH
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFND---PAHG---GSW----IKGAVYYFKI 421 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~---~~~~---~~~----~~~~~~~~~~ 421 (962)
+|+.|+++..+.....++||||-++++++..+..+.+.++++++++.+..|.. ...+ ..| ...++.+|..
T Consensus 309 nt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i 388 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFII 388 (1034)
T ss_pred cchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhh
Confidence 99999999999998889999999999999999999888887777665432211 0111 122 2345677888
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCC
Q psy886 422 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSS 501 (962)
Q Consensus 422 ~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 501 (962)
+++++|+|+|||||+++|+++++++++|.++|++||+++||||+|+.++||+|||||||+|+|+|.+.|+++..+..+..
T Consensus 389 ~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~ 468 (1034)
T KOG0204|consen 389 AVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSP 468 (1034)
T ss_pred eeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765432110
Q ss_pred cceEEEeCCccccCcceecCCCccCCCChHHHHHHHH-HHhhccCCcccccccc-CceEEecChhHHHHHHHHHHcCCCC
Q psy886 502 FLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGT-ICIMCNDSAIDFNEFK-QAFEKVGEATETALIVLAEKLNPFN 579 (962)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~lcn~~~~~~~~~~-~~~~~~g~p~e~Al~~~a~~~g~~~ 579 (962)
.. ..-.+.+.+++. ..+...+..+..++.+ ...++.|+|||.||+.++.++|...
T Consensus 469 -------------~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~ 525 (1034)
T KOG0204|consen 469 -------------KS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDF 525 (1034)
T ss_pred -------------cc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcch
Confidence 00 001133344333 2333333333333322 3677899999999999999988733
Q ss_pred cccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhccccccc-CCee
Q psy886 580 VSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQK 658 (962)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~~~~ 658 (962)
.. .+.+.+..+.+||+|+||+|+++++.+++ +.++|+|||+|.||.+|+++.. +|+.
T Consensus 526 ~~----------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~------~~y~~~KGAsEiVL~~C~~~~~~~g~~ 583 (1034)
T KOG0204|consen 526 QD----------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDG------GHYVHWKGASEIVLKSCEYYIDSNGEL 583 (1034)
T ss_pred Hh----------------hcchhheeEEeccCcccceeeEEEEcCCC------CeEEEEcChHHHHHHhhhheECCCCCE
Confidence 22 44566788899999999999999986542 3149999999999999999876 7888
Q ss_pred eeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccc-cccccccccccccCCeEEEEEecccCCCCccHHHHHHH
Q psy886 659 FPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPED-MNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIAR 737 (962)
Q Consensus 659 ~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~-~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~ 737 (962)
.+++++.+..+...++.|+ ++||||+|+|||+......+ .+.. .....+.+++++|++|++||+|||||+||+.
T Consensus 584 ~~~~e~~~~~~~~~Ie~mA--~~~LRti~lAy~df~~~~~~~~~~~---~~~~~~~~lt~laivGIkDPvRPgV~~AV~~ 658 (1034)
T KOG0204|consen 584 VPFNEDDRKSFKDVIEPMA--SEGLRTICLAYRDFVAGPDEEPSWD---NEELPEGGLTLLAIVGIKDPVRPGVPEAVQL 658 (1034)
T ss_pred eeCCHHHHHHHHHHHHHHH--HhhhheeeEEeeccccCCCCCCCcc---ccccCCCCeEEEEEeeccCCCCCCcHHHHHH
Confidence 9999999999999999996 99999999999996554211 1111 1234578999999999999999999999999
Q ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc---cccCCCC-------------------------------------
Q psy886 738 CRAAGIRVIVITGDNKATAEAICRRIGVFTEEE---DTTGKSY------------------------------------- 777 (962)
Q Consensus 738 l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~---~~~g~~l------------------------------------- 777 (962)
|++|||+|.|+||||..||++||.+|||+.+++ .++|+++
T Consensus 659 Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g 738 (1034)
T KOG0204|consen 659 CQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQG 738 (1034)
T ss_pred HHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcC
Confidence 999999999999999999999999999987654 3455544
Q ss_pred ----------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 778 ----------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 778 ----------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
++||||.||| +|||||||||||||+||||++||++++|||++|+||+||++|+|+.|++++++
T Consensus 739 ~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv 818 (1034)
T KOG0204|consen 739 EVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIV 818 (1034)
T ss_pred cEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehh
Confidence 5999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh-----------HHHHHHHHhhhHH---hhhcCCC
Q psy886 841 IFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-----------IHYQVDLTGGPDQ---VYLSGLP 901 (962)
Q Consensus 841 ~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-----------~~~~~~~~~~~~~---~~~~~~~ 901 (962)
.++++..--..||+++| | |||.|.|+|||+|||.+++|+|| .|||.++....-+ ++.
T Consensus 819 ~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~i---- 894 (1034)
T KOG0204|consen 819 NFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFI---- 894 (1034)
T ss_pred hhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999888889999999 4 99999999999999999999988 3888887655211 111
Q ss_pred cEEEeccchhhhhccccccCCCCccCCCccccc-cCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 902 DSIYYLPTTVFATHHMSCLGGGDEFKGLDCHIF-HDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
+.|... .+|+ + +.+.. ......|++|++||+||+||-||+|+-
T Consensus 895 -L~F~G~---~if~----~---------~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki 938 (1034)
T KOG0204|consen 895 -LNFAGK---SIFG----L---------NGPLHSPPSVHNTIIFNTFVFCQVFNEINARKI 938 (1034)
T ss_pred -HHhcch---hhhc----c---------CCCCCCchhhheeeehhHHHHHHHHHHHhhcch
Confidence 001100 1110 0 00010 223456999999999999999999974
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-114 Score=1076.91 Aligned_cols=755 Identities=27% Similarity=0.403 Sum_probs=560.0
Q ss_pred HHHhhhhhhccCccccCCCChhHH---HHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVH---IASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQ 117 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (962)
.+-.++..||+|.+..+++...++ ..+..+..++.+++.+++++ ...|.++++++++++++..++.+|
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~---------~~~~~~~~iIl~vv~in~~i~~~Q 101 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFA---------MHDWIEGGVISAIIALNILIGFIQ 101 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHH---------HhhHHHHHHHHhHHHHHHHHHHHH
Confidence 477888899999998776543332 22333333333333333322 125888999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCccee
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVI 197 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~ 197 (962)
|+|+++++++|+++.+.+++|+|||+ +
T Consensus 102 E~~aekal~aL~~l~~~~~~ViRdg~--~--------------------------------------------------- 128 (1053)
T TIGR01523 102 EYKAEKTMDSLKNLASPMAHVIRNGK--S--------------------------------------------------- 128 (1053)
T ss_pred HHHHHHHHHHHhccCCCceEEEeCCe--e---------------------------------------------------
Confidence 99999999999999888889988887 3
Q ss_pred ecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeC
Q psy886 198 KHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVS 277 (962)
Q Consensus 198 k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~ 277 (962)
++|+++||||||||.|+
T Consensus 129 ---------------------------------------------------------------~~I~a~eLVpGDIv~L~ 145 (1053)
T TIGR01523 129 ---------------------------------------------------------------DAIDSHDLVPGDICLLK 145 (1053)
T ss_pred ---------------------------------------------------------------eecCHhhCCCCCEEEEC
Confidence 45555566666666666
Q ss_pred CCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCC--CCccCCCCCcceEecCceeeeceEEEEEEEeccchhh
Q psy886 278 VGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVP--DPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAI 355 (962)
Q Consensus 278 ~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~--~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~ 355 (962)
+||+||||+||++ +.+|.||||+|||||.||.|.+.... +......++.|++|+||.|++|+++++|++||++|++
T Consensus 146 ~Gd~VPAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~ 223 (1053)
T TIGR01523 146 TGDTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEI 223 (1053)
T ss_pred CCCEeeccEEEEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHH
Confidence 6666666666665 45789999999999999999876432 2234456889999999999999999999999999999
Q ss_pred HHHHhhcccccc-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy886 356 GKIRTEMSETEE-----------------------------------IKTPLQQKLDEFGEQLSKVISIICVAVWAINIG 400 (962)
Q Consensus 356 gki~~~~~~~~~-----------------------------------~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~ 400 (962)
|||++++.+.+. .+||||+++++++++++.++++++++++++..
T Consensus 224 GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~- 302 (1053)
T TIGR01523 224 GAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK- 302 (1053)
T ss_pred HHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999998854321 24999999999999998888888877776532
Q ss_pred cccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCccc
Q psy886 401 HFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLT 480 (962)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT 480 (962)
+ .+ ....+..+++++++++|||||++++++++++++||+|+|++||+++++|+||++++||+|||||||
T Consensus 303 -~-------~~---~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT 371 (1053)
T TIGR01523 303 -F-------DV---DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTIT 371 (1053)
T ss_pred -h-------hh---hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccc
Confidence 1 01 123566789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEEecc-ccCCCCCcceEEEe--CCccccC-cce--------------------ecCC-----CccC-C--C
Q psy886 481 TNQMSVSRMFIFDK-IEGSDSSFLEFEIT--GSTYEPI-GDV--------------------FLNG-----SKIK-G--A 528 (962)
Q Consensus 481 ~n~m~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~-~~~--------------------~~~~-----~~~~-~--~ 528 (962)
+|+|+|+++|..+. .+ .+. +.+|.|. +.. .... ...+ . .
T Consensus 372 ~N~M~V~~i~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (1053)
T TIGR01523 372 QGKMIARQIWIPRFGTI---------SIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDI 442 (1053)
T ss_pred cceEEEEEEEEcCCceE---------EecCCCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999987541 11 111 0111111 000 0000 0000 0 0
Q ss_pred ChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCccc---CCCchh-hH---H--HhhhhHHh
Q psy886 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSK---SGLGRR-EQ---A--IAVRQDVE 599 (962)
Q Consensus 529 ~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~---~~~~~~-~~---~--~~~~~~~~ 599 (962)
..+.+.+++.++++||++.+..++..+.+...|||+|.||+.++.+.|+..... ...... +. . ........
T Consensus 443 ~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1053)
T TIGR01523 443 DMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGS 522 (1053)
T ss_pred ccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccc
Confidence 123466788889999998765432223456789999999999999888632100 000000 00 0 00000113
Q ss_pred hhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccC-C-eeeeCCHHHHHHHHHHHHHHh
Q psy886 600 TKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG-S-QKFPLTATLKNRILDLTRQYG 677 (962)
Q Consensus 600 ~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~-~~~~l~~~~~~~i~~~~~~~~ 677 (962)
..|+++.++||||+||||+++++..++ +.+++|+|||||.|+++|+++..+ + +..+++++.++++.+..++|+
T Consensus 523 ~~~~~~~~~pFds~rK~msvv~~~~~~-----~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a 597 (1053)
T TIGR01523 523 AQFEFIAEFPFDSEIKRMASIYEDNHG-----ETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLA 597 (1053)
T ss_pred cccceEEEeccCCCCCeEEEEEEeCCC-----CEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHH
Confidence 468899999999999999999975421 146899999999999999976542 2 467899999999999999996
Q ss_pred cccchhheeeEEeeeCCCCccccc-cc-cccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHH
Q psy886 678 TGRDTLRCLGLATADNPLKPEDMN-LA-DSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKAT 755 (962)
Q Consensus 678 ~~~~glRvl~~A~~~~~~~~~~~~-~~-~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~T 755 (962)
++|+|||++|||+++.++.... .. .....+.+|+||+|+|+++++||||+|++++|+.||+|||+|||+||||+.|
T Consensus 598 --~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t 675 (1053)
T TIGR01523 598 --AEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPET 675 (1053)
T ss_pred --hcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 9999999999998764321100 00 0011235689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC-----------ccccCCC------------------------------------------------
Q psy886 756 AEAICRRIGVFTEE-----------EDTTGKS------------------------------------------------ 776 (962)
Q Consensus 756 A~~IA~~~GI~~~~-----------~~~~g~~------------------------------------------------ 776 (962)
|.+||++|||.+++ ..++|++
T Consensus 676 A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGv 755 (1053)
T TIGR01523 676 AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGV 755 (1053)
T ss_pred HHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCc
Confidence 99999999997531 2233322
Q ss_pred -----CCcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh---
Q psy886 777 -----YSKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAAL--- 847 (962)
Q Consensus 777 -----l~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~--- 847 (962)
|++|||||||| +|||+||++||+||+||||++|+++|++||++|+||+|++.|+|++|++++++++++.++
T Consensus 756 NDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~ 835 (1053)
T TIGR01523 756 NDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDE 835 (1053)
T ss_pred chHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 24999999999 999999999999999999999999999999999999999999999999999999999988
Q ss_pred -CC-CccchhHH-H----hhCcccccccccCCCCcCccchh-------H-----HHHHHHHhhhHHhhhcCCCcEEEec-
Q psy886 848 -GL-PEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-------I-----HYQVDLTGGPDQVYLSGLPDSIYYL- 907 (962)
Q Consensus 848 -~~-~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 907 (962)
|+ |.||+|+| | +||++|+++|++|||++++|+|| + ++++++.|...++.. ...|++
T Consensus 836 ~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~----l~~~~~~ 911 (1053)
T TIGR01523 836 NGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSC----LASFTGI 911 (1053)
T ss_pred cCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 44 58999999 3 99999999999999999999988 2 334444454222110 000100
Q ss_pred -cch--hhhhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 908 -PTT--VFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 908 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
..+ ..+.+ .|.. .+ +..|. ...+|+|++|++++++|++|+||||+++
T Consensus 912 ~~~~~~~~~~~--~~~~---~~-~~~~~--~~~~a~t~~f~~l~~~~~~~~~~~r~~~ 961 (1053)
T TIGR01523 912 LYGFGSGNLGH--DCDA---HY-HAGCN--DVFKARSAAFATMTFCALILAVEVKDFD 961 (1053)
T ss_pred HHhccCccccc--cccc---cc-ccccc--chhhhHHHHHHHHHHHHHHHHHHHhcCc
Confidence 000 00000 1210 01 11121 2346899999999999999999999863
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-113 Score=1057.17 Aligned_cols=710 Identities=36% Similarity=0.517 Sum_probs=563.5
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||.|.+...+....+... ...++..+++++.++..+.... .+...++.+++++.+
T Consensus 48 ~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~---------~~~~~I~~~i~~n~~ 118 (917)
T COG0474 48 EEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG---------VDAIVILLVVVINAL 118 (917)
T ss_pred HHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---------cceeeehHHHHHHHH
Confidence 446677778999999866654333222 2333444444444443221110 344577788888889
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
++.+||+|+++++++|+++.+..++|+|||+ ++
T Consensus 119 ~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~--~~--------------------------------------------- 151 (917)
T COG0474 119 LGFVQEYRAEKALEALKKMSSPKAKVLRDGK--FV--------------------------------------------- 151 (917)
T ss_pred HHHHHHHHHHHHHHHHHhhccCceEEEeCCc--EE---------------------------------------------
Confidence 9999999999999999999988899988887 44
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
+|++++|||||
T Consensus 152 ---------------------------------------------------------------------~i~a~eLVpGD 162 (917)
T COG0474 152 ---------------------------------------------------------------------EIPASELVPGD 162 (917)
T ss_pred ---------------------------------------------------------------------EecHHHCCCCc
Confidence 45555555555
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCC-CCcceEecCceeeeceEEEEEEEecc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQ-DKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~-~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
||++++||+||||+||+++ .+++||||+|||||.|+.|.+.+....+.+.. ++.|++|+||.|++|+++|+|++||+
T Consensus 163 iV~l~~gd~vPAD~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~ 240 (917)
T COG0474 163 IVLLEAGDVVPADLRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGF 240 (917)
T ss_pred EEEECCCCccccceEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcC
Confidence 5555555555555555543 23689999999999999999887665555555 89999999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcC
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIP 431 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP 431 (962)
+|++||++.++.......||+|++++++...+..++++++++++++++... ..+| ...|+.++++++++||
T Consensus 241 ~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~~----~~~~~~~v~l~va~IP 311 (917)
T COG0474 241 ETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRG-----GNGL----LESFLTALALAVAAVP 311 (917)
T ss_pred ccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CccH----HHHHHHHHHHHHhccc
Confidence 999999999998887789999999999999999999999988888763211 1113 3468899999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCc
Q psy886 432 EGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGST 511 (962)
Q Consensus 432 ~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (962)
||||+++++++++++++|+|++++||+++++|+||++++||||||||||+|+|+|++++..++.. .
T Consensus 312 egLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~--------------~ 377 (917)
T COG0474 312 EGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK--------------D 377 (917)
T ss_pred cchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcc--------------c
Confidence 99999999999999999999999999999999999999999999999999999999999874100 0
Q ss_pred cccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHH
Q psy886 512 YEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591 (962)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 591 (962)
..+ ......+.+.+++..+++||+.....+ . ++..|||+|.||++++.+.|... .
T Consensus 378 ~~~----------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~---------- 432 (917)
T COG0474 378 IDD----------KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-D---------- 432 (917)
T ss_pred ccc----------cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-C----------
Confidence 000 011122445577888999999877654 2 77899999999999999988622 1
Q ss_pred HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHH
Q psy886 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILD 671 (962)
Q Consensus 592 ~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 671 (962)
.......++++.++||||+|||||++++..++ ++++++|||||.|+++|++. ++..+++++.++.+++
T Consensus 433 ---~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~------~~~~~~KGApe~il~~~~~~---~~~~~~~~~~~~~~~~ 500 (917)
T COG0474 433 ---LSGLEVEYPILAEIPFDSERKRMSVIVKTDEG------KYILFVKGAPEVILERCKSI---GELEPLTEEGLRTLEE 500 (917)
T ss_pred ---HHHHhhhcceeEEecCCCCceEEEEEEEcCCC------cEEEEEcCChHHHHHHhccc---CcccccCHHHHHHHHH
Confidence 11245667899999999999999999984331 48999999999999999987 6777899999999999
Q ss_pred HHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCC
Q psy886 672 LTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 751 (962)
Q Consensus 672 ~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD 751 (962)
..++|+ ++|||||++|||..+..+.+.. . +..|+||+|+|+++|+||||+||++||+.|++|||||||||||
T Consensus 501 ~~~~la--~~glRvla~A~k~~~~~~~~~~-----~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 501 AVKELA--SEGLRVLAVAYKKLDRAEKDDE-----V-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHH--HHHHHHHHHHhccCCcccccch-----h-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 999996 9999999999997654433211 1 4678999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCc---cccCCCC---------------------------------------------------
Q psy886 752 NKATAEAICRRIGVFTEEE---DTTGKSY--------------------------------------------------- 777 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~~~---~~~g~~l--------------------------------------------------- 777 (962)
|++||++||++|||..+.. .++|.++
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDap 652 (917)
T COG0474 573 HVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAP 652 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHH
Confidence 9999999999999977642 5667654
Q ss_pred --CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCC-ccc
Q psy886 778 --SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLP-EAL 853 (962)
Q Consensus 778 --~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~-~pl 853 (962)
++|||||||| +|||+||+||||||+||||++|+.+|+|||++|+||+|++.|.+++|++++++++++.+++.+ .||
T Consensus 653 ALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~ 732 (917)
T COG0474 653 ALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPL 732 (917)
T ss_pred HHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 4999999999 899999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred hhHH-H----hhCcccccccccCCCCcCccchh------------HHHHHHHH-hhhHHhhhcCCCcEEEeccchhhhhc
Q psy886 854 IKKI-S----TTNRGKKKKLSYNFLDISLLGPA------------IHYQVDLT-GGPDQVYLSGLPDSIYYLPTTVFATH 915 (962)
Q Consensus 854 ~~~q-L----~~d~~~a~al~~e~~~~~~m~~p------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (962)
+|+| | ++|++|+++|+.++|+.++|++| +++++++. |....+.. ..+|.+ ... .
T Consensus 733 ~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~----~~~~~~---~~~-~ 804 (917)
T COG0474 733 TPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILF----ILTFLL---YLL-G 804 (917)
T ss_pred HHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHH----HHHHHH---HHH-h
Confidence 9999 3 99999999999999999999887 25664443 33221110 000000 000 0
Q ss_pred cccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 916 HMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
..+ ...+... ....++|++|+.++++|+++++++|+.
T Consensus 805 ~~~------~~~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~ 841 (917)
T COG0474 805 FIA------NTLGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSR 841 (917)
T ss_pred ccc------cccchhh---HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 000 0000000 134578999999999999999999985
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-111 Score=1041.71 Aligned_cols=753 Identities=60% Similarity=0.910 Sum_probs=579.7
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccE
Q psy886 67 STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGV 146 (962)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~ 146 (962)
...+++++++++++++.+... ......|.++++++++++++..++.++|+|+++++++|.++.+.+++|+|||+ +
T Consensus 9 ~~~iL~~aa~ls~~~~~~~~~---~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~--~ 83 (917)
T TIGR01116 9 LVRILLLAACVSFVLAWFEEG---EETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRDGR--W 83 (917)
T ss_pred HHHHHHHHHHHHHHHhccccc---ccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEECCE--E
Confidence 456666777777766543211 11234688999999999999999999999999999999999999999999998 7
Q ss_pred EEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCcccccc
Q psy886 147 QKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCG 226 (962)
Q Consensus 147 ~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~g 226 (962)
++|+++||+|||+|.|++||+|||||+|++| .++.||||+|||||.|+.|.++..+
T Consensus 84 ~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~--~~l~VdeS~LTGES~pv~K~~~~~~---------------------- 139 (917)
T TIGR01116 84 SVIKAKDLVPGDIVELAVGDKVPADIRVLSL--KTLRVDQSILTGESVSVNKHTESVP---------------------- 139 (917)
T ss_pred EEEEHHHCCCCCEEEECCCCEeeccEEEEEe--cceEEEcccccCCCCcccccccccC----------------------
Confidence 9999999999999999999999999999975 3567888888888888888655210
Q ss_pred chhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCC
Q psy886 227 RMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 306 (962)
Q Consensus 227 r~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGE 306 (962)
T Consensus 140 -------------------------------------------------------------------------------- 139 (917)
T TIGR01116 140 -------------------------------------------------------------------------------- 139 (917)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHH
Q psy886 307 SVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV 386 (962)
Q Consensus 307 s~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~ 386 (962)
+......+++|++|+||.+.+|+++++|++||.+|++|||.+++...+.++||+|+++++++..++.+
T Consensus 140 ------------~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~ 207 (917)
T TIGR01116 140 ------------DERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKV 207 (917)
T ss_pred ------------ccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHH
Confidence 00001134569999999999999999999999999999999999988889999999999999999888
Q ss_pred HHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcC
Q psy886 387 ISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLG 466 (962)
Q Consensus 387 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG 466 (962)
++++++++|+++...+.....+..|...+...+..++++++++|||+||+++++++++++++|+++|++||+++++|+||
T Consensus 208 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg 287 (917)
T TIGR01116 208 IGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLG 287 (917)
T ss_pred HHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhcc
Confidence 88777777766533322222233565555667778899999999999999999999999999999999999999999999
Q ss_pred CeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCC
Q psy886 467 CTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDS 546 (962)
Q Consensus 467 ~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~ 546 (962)
++++||||||||||+|+|+|.+++..+..+. ....+..++..|+|.+....+.........+.+..++.++++||++
T Consensus 288 ~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~ 364 (917)
T TIGR01116 288 CTTVICSDKTGTLTTNQMSVCKVVALDPSSS---SLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS 364 (917)
T ss_pred CceEEEecCCccccCCeEEEEEEEecCCccc---ccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998764331 1234555666676654322111111111224456777889999998
Q ss_pred ccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCC
Q psy886 547 AIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKS 626 (962)
Q Consensus 547 ~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~ 626 (962)
....+.....+...|||+|.||+.++.+.|......................++.|++++++||||+|||||++++..+
T Consensus 365 ~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~- 443 (917)
T TIGR01116 365 SLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPST- 443 (917)
T ss_pred eeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCC-
Confidence 7654332233556799999999999999886432211000000000001123456889999999999999999998532
Q ss_pred CCCCCCCCEEEEeCChHHHHhcccccccC-CeeeeCCHHHHHHHHHHHHHHhccc-chhheeeEEeeeCCCCcccccccc
Q psy886 627 SKLGSSGPKLFVKGAPEGVLERCTHARIG-SQKFPLTATLKNRILDLTRQYGTGR-DTLRCLGLATADNPLKPEDMNLAD 704 (962)
Q Consensus 627 ~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~~~~~l~~~~~~~i~~~~~~~~~~~-~glRvl~~A~~~~~~~~~~~~~~~ 704 (962)
++++|+|||||.|+++|+++..+ +...+++++.++++.+..++|+ + +|+||+++|||+++.+.......+
T Consensus 444 ------~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a--~~~GlRvl~~A~k~~~~~~~~~~~~~ 515 (917)
T TIGR01116 444 ------GNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMG--TTKALRCLALAFKDIPDPREEDLLSD 515 (917)
T ss_pred ------cEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHH--hhcCCeEEEEEEEECCcccccccccc
Confidence 67899999999999999987654 6778999999999999999986 7 999999999998764322111111
Q ss_pred ccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc-----cccCC----
Q psy886 705 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE-----DTTGK---- 775 (962)
Q Consensus 705 ~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~-----~~~g~---- 775 (962)
...++.+|+||+|+|+++++||||+|++++|+.||+|||++||+||||++||.+||+++||..++. ..+|+
T Consensus 516 ~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~ 595 (917)
T TIGR01116 516 PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE 595 (917)
T ss_pred chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh
Confidence 223346789999999999999999999999999999999999999999999999999999976432 11221
Q ss_pred -------------------------------------------------CCCcCcEEEeccChhHHHHhhcccccccCCh
Q psy886 776 -------------------------------------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806 (962)
Q Consensus 776 -------------------------------------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f 806 (962)
++++||||||||+|+|+||++||+||.||||
T Consensus 596 ~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f 675 (917)
T TIGR01116 596 MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNF 675 (917)
T ss_pred CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCH
Confidence 1259999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh
Q psy886 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 807 ~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p 881 (962)
++|++++++||++|+||+|++.|.++.|++++++++++.++++|.||+|+| | ++|.+|+++|++|||++++|+||
T Consensus 676 ~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~p 755 (917)
T TIGR01116 676 ATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKP 755 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCC
Confidence 999999999999999999999999999999999999999999999999999 3 89999999999999999999888
Q ss_pred ------------HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhcc--------ccccCCCCccCCCccccc-cCccch
Q psy886 882 ------------IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHH--------MSCLGGGDEFKGLDCHIF-HDPHPM 940 (962)
Q Consensus 882 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~ 940 (962)
.++++++.|+..++.. ...|++. ....+. .+|.. +.+..+..+ ....++
T Consensus 756 P~~~~~~l~~~~~~~~~~~~g~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 825 (917)
T TIGR01116 756 PRRPDEPLITGWLFFRYLVVGVYVGLAT----VGGFVWW--YLLTHFTGCDEDSFTTCPD----FEDPDCYVFEGKQPAR 825 (917)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHHHH----HHHHHHH--HhhcCcccccccccccccc----cccccccccccccchH
Confidence 2445555554211100 0000000 000000 01110 011000000 134688
Q ss_pred hhHHHHHHHHHHHHHhhccCCC
Q psy886 941 TMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 941 t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
||+|++|+++|+||+||||+++
T Consensus 826 t~~f~~~v~~q~~~~~~~r~~~ 847 (917)
T TIGR01116 826 TISLSVLVVIEMFNALNALSED 847 (917)
T ss_pred HHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999963
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-108 Score=1005.58 Aligned_cols=688 Identities=22% Similarity=0.336 Sum_probs=523.6
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH---HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA---STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVW 116 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 116 (962)
..+..+...||+|.+..+++...+... +.++..++.+++.++.++ .+.|.++++++++++++.+++++
T Consensus 71 ~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~---------~~~~~~a~~I~~iv~i~~~i~~~ 141 (902)
T PRK10517 71 AEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYA---------TEDLFAAGVIALMVAISTLLNFI 141 (902)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH---------HccHHHHHHHHHHHHHHHHHHHH
Confidence 346778888999999888775443322 333332222222211111 12577889999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCeEEEEECCC----ccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 117 QERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 117 ~~~~~~~~l~~l~~~~~~~~~v~r~~~----~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
+|+|+++++++|+++.+.+++|+|||+ .++++|++++|+|||+|.|++||+|||||+|++| .++.||||+||||
T Consensus 142 qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g--~~l~VDES~LTGE 219 (902)
T PRK10517 142 QEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQA--RDLFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEc--CceEEEecCcCCC
Confidence 999999999999999999999999953 1156666666666666666666666666666653 2344666666666
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
|.||+|.+++
T Consensus 220 S~PV~K~~~~---------------------------------------------------------------------- 229 (902)
T PRK10517 220 SLPVEKFATT---------------------------------------------------------------------- 229 (902)
T ss_pred CCceeccccc----------------------------------------------------------------------
Confidence 6666665442
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
..+......+++|++|+||.|.+|+++++|++||.+
T Consensus 230 --------------------------------------------~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~ 265 (902)
T PRK10517 230 --------------------------------------------RQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGAN 265 (902)
T ss_pred --------------------------------------------ccccccCccccccceeeCceEeeeeEEEEEEEeccc
Confidence 111112234567999999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|++|||++++.+++.+++|+|+.++++++++..++++++.++++++.. ...+|. ..+..++++++++|||
T Consensus 266 T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~------~~~~~~----~~l~~alsv~V~~~Pe 335 (902)
T PRK10517 266 TWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY------TKGDWW----EAALFALSVAVGLTPE 335 (902)
T ss_pred cHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------hcCCHH----HHHHHHHHHHHHHccc
Confidence 999999999998888899999999999999988887777766655421 112343 3577899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++...+
T Consensus 336 ~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~------------------ 397 (902)
T PRK10517 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG------------------ 397 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC------------------
Confidence 99999999999999999999999999999999999999999999999999999987632110
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHH
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAI 592 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~ 592 (962)
.+.+ +++..+++|... . ...|||+|.|++.++.+.+.
T Consensus 398 ---------------~~~~---~ll~~a~l~~~~--~--------~~~~~p~d~All~~a~~~~~--------------- 434 (902)
T PRK10517 398 ---------------KTSE---RVLHSAWLNSHY--Q--------TGLKNLLDTAVLEGVDEESA--------------- 434 (902)
T ss_pred ---------------CCHH---HHHHHHHhcCCc--C--------CCCCCHHHHHHHHHHHhcch---------------
Confidence 0011 223333443321 1 11589999999998765321
Q ss_pred hhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 593 AVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 593 ~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
......|+++.++||||+||+|+++++..++ ...+++|||||.++++|+++..++...+++++.++++.+.
T Consensus 435 ---~~~~~~~~~~~~~pFds~~k~msvvv~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 505 (902)
T PRK10517 435 ---RSLASRWQKIDEIPFDFERRRMSVVVAENTE------HHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRV 505 (902)
T ss_pred ---hhhhhcCceEEEeeeCCCcceEEEEEEECCC------eEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHH
Confidence 0134567889999999999999999874321 4679999999999999999888888889999989899888
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.++++ ++|+|++++|||+.+..+.+.. ...|+|++|+|+++|+||||||++++|++||++||+|+||||||
T Consensus 506 ~~~~a--~~G~rvlavA~k~~~~~~~~~~-------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~ 576 (902)
T PRK10517 506 TDTLN--RQGLRVVAVATKYLPAREGDYQ-------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576 (902)
T ss_pred HHHHH--hcCCEEEEEEEecCCccccccc-------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCC
Confidence 88885 8999999999998754322110 11368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC----------------------------------------------------CccccCCCCCcC
Q psy886 753 KATAEAICRRIGVFTE----------------------------------------------------EEDTTGKSYSKA 780 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~~----------------------------------------------------~~~~~g~~l~~A 780 (962)
+.||.+||+++||..+ |+.++.++|++|
T Consensus 577 ~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~A 656 (902)
T PRK10517 577 ELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAA 656 (902)
T ss_pred HHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhC
Confidence 9999999999999521 112233345799
Q ss_pred cEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H-
Q psy886 781 EIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S- 858 (962)
Q Consensus 781 dVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L- 858 (962)
|||||||+|||+||+||||||+||||++|+++|++||++|+||+|++.|++++|++++++++++.++..++||+|+| |
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~ 736 (902)
T PRK10517 657 DIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLI 736 (902)
T ss_pred CEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988885448999999 3
Q ss_pred ---hhCcccccccccCCCCcCccchh------HHHH-HHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCccCC
Q psy886 859 ---TTNRGKKKKLSYNFLDISLLGPA------IHYQ-VDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDEFKG 928 (962)
Q Consensus 859 ---~~d~~~a~al~~e~~~~~~m~~p------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (962)
+|| +|++||++|||++++|+|| .+.+ .++.|....++. ..+|+ .+++.+.
T Consensus 737 inl~~D-~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~~~~~---------- 796 (902)
T PRK10517 737 QNLLYD-VSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFD----ILTFC-----LMWWVFH---------- 796 (902)
T ss_pred HHHHHH-HhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHH-----HHHHHcc----------
Confidence 999 7999999999999999998 2333 444444322111 00011 0111110
Q ss_pred CccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 929 LDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 929 ~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
...+... ...+|..|++++++|+||+||+|+++
T Consensus 797 ~~~~~~~-~~~~~~~F~~~~~~q~~~~~~~R~~~ 829 (902)
T PRK10517 797 ANTPETQ-TLFQSGWFVVGLLSQTLIVHMIRTRR 829 (902)
T ss_pred ccchhhH-hHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 0000000 01223459999999999999999863
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-106 Score=1010.92 Aligned_cols=672 Identities=31% Similarity=0.457 Sum_probs=527.9
Q ss_pred HHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
.+-.+...||.|.+..+++...++.. +..+++++++++++++.+...........+|.++++++++++++.++
T Consensus 41 e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i 120 (997)
T TIGR01106 41 RAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCF 120 (997)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHH
Confidence 47778888999998766555333222 33444455555444433321111111224678889999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.++++|+++++++|.++.|.+++|+|||+ +++|++++|+|||+|.|+
T Consensus 121 ~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~--~~~I~~~~lv~GDiv~l~------------------------------ 168 (997)
T TIGR01106 121 SYYQEAKSSKIMESFKNMVPQQALVIRDGE--KMSINAEQVVVGDLVEVK------------------------------ 168 (997)
T ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEECCE--EEEeeHHHCCCCCEEEEC------------------------------
Confidence 999999999999999999999999999987 455555555555555554
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
T Consensus 169 -------------------------------------------------------------------------------- 168 (997)
T TIGR01106 169 -------------------------------------------------------------------------------- 168 (997)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+||+|||||++++ +..+.||||+|||||.|+.|.++.. ...+.+.+|++|+||.|.+|+++++|++||.+|
T Consensus 169 ----~Gd~IPaD~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T 239 (997)
T TIGR01106 169 ----GGDRIPADLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRT 239 (997)
T ss_pred ----CCCEEeeeEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccc
Confidence 4555555555554 2357899999999999999987532 122347889999999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCc
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEG 433 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~ 433 (962)
++||+++++.+.+.+++|+|++++++++.+..+++++++++++++.. .+..|. ..+..++++++++|||+
T Consensus 240 ~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~~~i~v~v~~iP~~ 309 (997)
T TIGR01106 240 VMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI------LGYTWL----EAVIFLIGIIVANVPEG 309 (997)
T ss_pred hhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCHH----HHHHHHHHHHhhcCCcc
Confidence 99999999988888899999999999999998887777776665431 122343 35667889999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccc
Q psy886 434 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYE 513 (962)
Q Consensus 434 Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (962)
||++++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..+..+.. +.
T Consensus 310 L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~----------~~ 379 (997)
T TIGR01106 310 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT----------ED 379 (997)
T ss_pred chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCc----------cC
Confidence 99999999999999999999999999999999999999999999999999999999986643321100 00
Q ss_pred cCcceecCCCccCCCChHHHHHHHHHHhhccCCcccccccc---CceEEecChhHHHHHHHHHHcCCCCcccCCCchhhH
Q psy886 514 PIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFK---QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQ 590 (962)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~---~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~ 590 (962)
+.+.. . ..+......++.++++||++....+... ..++..|||+|.||++++.+.+...
T Consensus 380 ~~~~~------~-~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~----------- 441 (997)
T TIGR01106 380 QSGVS------F-DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV----------- 441 (997)
T ss_pred CCCcc------C-CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH-----------
Confidence 10000 0 0111334567778899998765432111 1235679999999999998654310
Q ss_pred HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHH
Q psy886 591 AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRIL 670 (962)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 670 (962)
...+..|+++.++||+|+||||+++++..+. +++.+++|+|||||.|+++|+++..+++..+++++.++++.
T Consensus 442 -----~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~---~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~ 513 (997)
T TIGR01106 442 -----MEMRERNPKVVEIPFNSTNKYQLSIHENEDP---RDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQ 513 (997)
T ss_pred -----HHHHhhCceeEEeccCCCCceEEEEEeccCC---CCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHH
Confidence 1135668899999999999999998764221 11257899999999999999988888888899999999999
Q ss_pred HHHHHHhcccchhheeeEEeeeCCCCcccccc-ccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEc
Q psy886 671 DLTRQYGTGRDTLRCLGLATADNPLKPEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT 749 (962)
Q Consensus 671 ~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~-~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiT 749 (962)
+..++++ ++|+||+++|||+++.++..... .+....+..|+||+|+|+++++||||+|++++|++|+++||+|+|+|
T Consensus 514 ~~~~~~a--~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~T 591 (997)
T TIGR01106 514 NAYLELG--GLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVT 591 (997)
T ss_pred HHHHHHH--hcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEEC
Confidence 9999996 89999999999987643211100 01111123489999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCc-------------------------cccCCCC---------------------------
Q psy886 750 GDNKATAEAICRRIGVFTEEE-------------------------DTTGKSY--------------------------- 777 (962)
Q Consensus 750 GD~~~TA~~IA~~~GI~~~~~-------------------------~~~g~~l--------------------------- 777 (962)
||++.||.++|+++||++++. .++|+++
T Consensus 592 Gd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeq 671 (997)
T TIGR01106 592 GDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQ 671 (997)
T ss_pred CCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHH
Confidence 999999999999999975321 2233221
Q ss_pred ----------------------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHH
Q psy886 778 ----------------------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIR 828 (962)
Q Consensus 778 ----------------------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~ 828 (962)
++|||||||| +|+|+||+|||+||+||||++|+++|+|||++|+||+|++.
T Consensus 672 K~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~ 751 (997)
T TIGR01106 672 KLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIA 751 (997)
T ss_pred HHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh
Q psy886 829 YLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 829 ~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p 881 (962)
|+++.|++++++++++.+++.|+||+|+| | ++|++|+++|++|||++++|+||
T Consensus 752 ~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~ 809 (997)
T TIGR01106 752 YTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQ 809 (997)
T ss_pred HHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCC
Confidence 99999999999999999999999999999 3 99999999999999999999866
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-106 Score=993.46 Aligned_cols=706 Identities=24% Similarity=0.339 Sum_probs=537.7
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+-.+...||+|.+..+++...++.. +..++++++++++++..+... ..+....|.++++++++++++.+
T Consensus 49 ~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~--~~~~~~~~~~~~iI~~~v~l~~~ 126 (903)
T PRK15122 49 EDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL--RRGEETDLTGVIIILTMVLLSGL 126 (903)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc--cCCccccHhHHHHHHHHHHHHHH
Confidence 357788889999999876654332221 334444555555544333211 11222368899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCC----ccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeeccc
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSI 188 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~----~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~ 188 (962)
+++++|+|+++++++|+++.+.+++|+|||+ .++++||+++|+|||+|.|++||+|||||+|++| .++.||||+
T Consensus 127 i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g--~~l~VDES~ 204 (903)
T PRK15122 127 LRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIES--RDLFISQAV 204 (903)
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc--CceEEEccc
Confidence 9999999999999999999999999999962 1278899999999999999999999999999974 346688999
Q ss_pred ccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeeccccc
Q psy886 189 LTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEI 268 (962)
Q Consensus 189 lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~L 268 (962)
|||||.||+|.+...+....
T Consensus 205 LTGES~PV~K~~~~~~~~~~------------------------------------------------------------ 224 (903)
T PRK15122 205 LTGEALPVEKYDTLGAVAGK------------------------------------------------------------ 224 (903)
T ss_pred cCCCCcceeeeccccccccc------------------------------------------------------------
Confidence 99999888886420000000
Q ss_pred CCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEE
Q psy886 269 VPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348 (962)
Q Consensus 269 v~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~ 348 (962)
+.. ...++ .....+++|++|+||.|.+|+++++|++
T Consensus 225 ------------------------~~~------~~~~~--------------~~~~~~~~n~vfaGT~V~~G~~~~~V~a 260 (903)
T PRK15122 225 ------------------------SAD------ALADD--------------EGSLLDLPNICFMGTNVVSGTATAVVVA 260 (903)
T ss_pred ------------------------ccc------ccccc--------------cCCcccccceEEeCCEEEeeeEEEEEEE
Confidence 000 00000 1122456799999999999999999999
Q ss_pred eccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHh
Q psy886 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVA 428 (962)
Q Consensus 349 tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~ 428 (962)
||.+|++|||++++.+ +..++|+|++++++++++..++++++.+++++... ...+|. ..+..+++++++
T Consensus 261 tG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~------~~~~~~----~~l~~aisl~V~ 329 (903)
T PRK15122 261 TGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF------TKGDWL----EALLFALAVAVG 329 (903)
T ss_pred eccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------ccCCHH----HHHHHHHHHHHH
Confidence 9999999999999877 56789999999999998888776666655544321 112343 357789999999
Q ss_pred hcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEe
Q psy886 429 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEIT 508 (962)
Q Consensus 429 ~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 508 (962)
+|||+||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..++.
T Consensus 330 ~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------- 396 (903)
T PRK15122 330 LTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------- 396 (903)
T ss_pred HccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-------------
Confidence 9999999999999999999999999999999999999999999999999999999999987632210
Q ss_pred CCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchh
Q psy886 509 GSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588 (962)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~ 588 (962)
..+. ++..+++|+. .. ...|||+|.|++.++.+.+...
T Consensus 397 --------------------~~~~---~l~~a~l~s~--~~--------~~~~~p~e~All~~a~~~~~~~--------- 434 (903)
T PRK15122 397 --------------------KDER---VLQLAWLNSF--HQ--------SGMKNLMDQAVVAFAEGNPEIV--------- 434 (903)
T ss_pred --------------------ChHH---HHHHHHHhCC--CC--------CCCCChHHHHHHHHHHHcCchh---------
Confidence 0111 2222333321 10 1158999999999998755310
Q ss_pred hHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHH
Q psy886 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNR 668 (962)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~ 668 (962)
....|+++.++||+|.||+|+++++..++ ++++++|||||.++++|++...++...+++++.+++
T Consensus 435 ---------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 435 ---------KPAGYRKVDELPFDFVRRRLSVVVEDAQG------QHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred ---------hhhcCceEEEeeeCCCcCEEEEEEEcCCC------cEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 12457888999999999999999875321 568999999999999999887777778899999999
Q ss_pred HHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEE
Q psy886 669 ILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVI 748 (962)
Q Consensus 669 i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~Mi 748 (962)
+.+..++++ .+|+|++++|||+.+.++.... .....|+|++|+|+++|+||||||++++|++||++||+|+|+
T Consensus 500 i~~~~~~~a--~~G~rvlavA~k~~~~~~~~~~-----~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~mi 572 (903)
T PRK15122 500 LLALAEAYN--ADGFRVLLVATREIPGGESRAQ-----YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVL 572 (903)
T ss_pred HHHHHHHHH--hCCCEEEEEEEeccCccccccc-----cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEE
Confidence 999888885 8999999999998754321100 011347899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCC----------------------------------------------------CccccCCC
Q psy886 749 TGDNKATAEAICRRIGVFTE----------------------------------------------------EEDTTGKS 776 (962)
Q Consensus 749 TGD~~~TA~~IA~~~GI~~~----------------------------------------------------~~~~~g~~ 776 (962)
||||+.||.+||+++||..+ |+.++.++
T Consensus 573 TGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA 652 (903)
T PRK15122 573 TGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652 (903)
T ss_pred CCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence 99999999999999999521 11122234
Q ss_pred CCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhH
Q psy886 777 YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKK 856 (962)
Q Consensus 777 l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 856 (962)
|++||||||||+|||+||+||||||+||||++|+++|++||++|+||+|++.|+++.|++++++++++.+++.++||+|+
T Consensus 653 Lk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~ 732 (903)
T PRK15122 653 LRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAI 732 (903)
T ss_pred HHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999988888766899999
Q ss_pred H-H----hhCcccccccccCCCCcCccchh------HHHHH-HHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCC
Q psy886 857 I-S----TTNRGKKKKLSYNFLDISLLGPA------IHYQV-DLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGD 924 (962)
Q Consensus 857 q-L----~~d~~~a~al~~e~~~~~~m~~p------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (962)
| | +||. |+++|++|||++++|++| ++.+. +++|....++. ..+|+ .+++.+..
T Consensus 733 qil~~nli~D~-~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~~~~~~----- 797 (903)
T PRK15122 733 HLLLQNLMYDI-SQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFD----ITTFA-----LMWFVFAA----- 797 (903)
T ss_pred HHHHHHHHHHH-HHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHH----HHHHH-----HHHHHhcc-----
Confidence 9 3 9995 999999999999999555 34333 33333222110 00011 01111100
Q ss_pred ccCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 925 EFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 925 ~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
+.. .. ....+|+.|++++++|+||+||+|+++
T Consensus 798 ---~~~--~~-~~~~~t~~f~~l~~~q~~~~~~~R~~~ 829 (903)
T PRK15122 798 ---NSV--EM-QALFQSGWFIEGLLSQTLVVHMLRTQK 829 (903)
T ss_pred ---CcH--hh-hhhhHHHHHHHHHHHHHHHHHhhCcCC
Confidence 000 00 011347889999999999999999863
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-106 Score=991.16 Aligned_cols=685 Identities=25% Similarity=0.385 Sum_probs=538.8
Q ss_pred HHHHhhhhhhccCccccCCCChhHHH---HHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHI---ASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVW 116 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 116 (962)
..+..+...||+|.+..+++...++. .+..+..++.+++.+++++ .+.|.++++++++++++.+++++
T Consensus 37 ~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~---------~~~~~~~~iI~~iv~~~~~i~~~ 107 (867)
T TIGR01524 37 VEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYL---------TDDLEATVIIALMVLASGLLGFI 107 (867)
T ss_pred HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHH---------HhhHHHHHHhhhHHHHHHHHHHH
Confidence 35778888999999987765433322 2333333333333333322 13578899999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCeEEEEE------CCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeeccccc
Q psy886 117 QERNAESAIEALKEYEPEMGKVIR------GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 190 (962)
Q Consensus 117 ~~~~~~~~l~~l~~~~~~~~~v~r------~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lT 190 (962)
+|+|+++++++|.++.+..++|+| ||+ +++|+++||+|||+|.|++||+|||||+|++| .++.||||+||
T Consensus 108 ~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~--~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g--~~l~VDES~LT 183 (867)
T TIGR01524 108 QESRAERAAYALKNMVKNTATVLRVINENGNGS--MDEVPIDALVPGDLIELAAGDIIPADARVISA--RDLFINQSALT 183 (867)
T ss_pred HHHHHHHHHHHHhhhccCeeEEEEecccCCCCe--EEEEEhhcCCCCCEEEECCCCEEcccEEEEec--CceEEEccccc
Confidence 999999999999999999999999 787 79999999999999999999999999999974 34568999999
Q ss_pred CCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCC
Q psy886 191 GESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 270 (962)
Q Consensus 191 GEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~ 270 (962)
|||.||+|.+++...
T Consensus 184 GES~PV~K~~~~~~~----------------------------------------------------------------- 198 (867)
T TIGR01524 184 GESLPVEKFVEDKRA----------------------------------------------------------------- 198 (867)
T ss_pred CCCCcccccCCcccc-----------------------------------------------------------------
Confidence 999999987664110
Q ss_pred CCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEec
Q psy886 271 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350 (962)
Q Consensus 271 GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG 350 (962)
......+++|++|+||.+.+|+++++|++||
T Consensus 199 -------------------------------------------------~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG 229 (867)
T TIGR01524 199 -------------------------------------------------RDPEILERENLCFMGTNVLSGHAQAVVLATG 229 (867)
T ss_pred -------------------------------------------------ccccccccccceecCCeEEEeEEEEEEEEEc
Confidence 0001134569999999999999999999999
Q ss_pred cchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy886 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAI 430 (962)
Q Consensus 351 ~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~i 430 (962)
.+|++|||.+++.+ +..++|+|++++++++++..+++++++++++++.. ...+|. ..+..++++++++|
T Consensus 230 ~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~------~~~~~~----~~~~~al~l~v~~i 298 (867)
T TIGR01524 230 SSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL------MKGDWL----EAFLFALAVAVGLT 298 (867)
T ss_pred CccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH------hcCCHH----HHHHHHHHHHHHhC
Confidence 99999999999988 67789999999999999988887777766655421 112343 35778999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCC
Q psy886 431 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGS 510 (962)
Q Consensus 431 P~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 510 (962)
||+||++++++++.++++|+|+|++||+++++|+||++++||||||||||+|+|+|.+++..++
T Consensus 299 P~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~---------------- 362 (867)
T TIGR01524 299 PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG---------------- 362 (867)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC----------------
Confidence 9999999999999999999999999999999999999999999999999999999988752110
Q ss_pred ccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhH
Q psy886 511 TYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQ 590 (962)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~ 590 (962)
.+.+ +++..+++|+.. + ...+||+|.|++.++.+...
T Consensus 363 -----------------~~~~---~~l~~a~l~~~~--~--------~~~~~p~~~Al~~~~~~~~~------------- 399 (867)
T TIGR01524 363 -----------------ETSE---RVLKMAWLNSYF--Q--------TGWKNVLDHAVLAKLDESAA------------- 399 (867)
T ss_pred -----------------CCHH---HHHHHHHHhCCC--C--------CCCCChHHHHHHHHHHhhch-------------
Confidence 0011 223333343321 1 11469999999998865311
Q ss_pred HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHH
Q psy886 591 AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRIL 670 (962)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 670 (962)
...+..|+++.++||||+||+|+++++..+. ..++++|||||.++++|+++..++...+++++.++++.
T Consensus 400 -----~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~------~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 468 (867)
T TIGR01524 400 -----RQTASRWKKVDEIPFDFDRRRLSVVVENRAE------VTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQ 468 (867)
T ss_pred -----hhHhhcCceEEEeccCCCcCEEEEEEEcCCc------eEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHH
Confidence 0123467889999999999999999875321 46899999999999999998888888899998888999
Q ss_pred HHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcC
Q psy886 671 DLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITG 750 (962)
Q Consensus 671 ~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTG 750 (962)
+..++++ ++|+|++++|||+++.++.+. ....|++|+|+|+++++||||+|++++|++||++||+|+|+||
T Consensus 469 ~~~~~~a--~~G~rvlavA~~~~~~~~~~~-------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTG 539 (867)
T TIGR01524 469 DMTAEMN--RQGIRVIAVATKTLKVGEADF-------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTG 539 (867)
T ss_pred HHHHHHH--hcCCEEEEEEEeccCcccccc-------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcC
Confidence 8888885 899999999999876432211 0113689999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCC----------------------------------------------------CccccCCCCC
Q psy886 751 DNKATAEAICRRIGVFTE----------------------------------------------------EEDTTGKSYS 778 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~----------------------------------------------------~~~~~g~~l~ 778 (962)
||+.||.+||+++||..+ |+.++.++|+
T Consensus 540 D~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk 619 (867)
T TIGR01524 540 DNEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALR 619 (867)
T ss_pred CCHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHH
Confidence 999999999999999621 1122334557
Q ss_pred cCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-
Q psy886 779 KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI- 857 (962)
Q Consensus 779 ~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q- 857 (962)
+||||||||+|||+||+||||||+||||++|+++|++||++|+||||+++|+++.|+++++.++++.++..++||+|+|
T Consensus 620 ~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qi 699 (867)
T TIGR01524 620 KADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHL 699 (867)
T ss_pred hCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988887669999999
Q ss_pred H----hhCcccccccccCCCCcCccchh-------HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCcc
Q psy886 858 S----TTNRGKKKKLSYNFLDISLLGPA-------IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDEF 926 (962)
Q Consensus 858 L----~~d~~~a~al~~e~~~~~~m~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (962)
| +|| +|++||++|||++++|++| +.+.++++|....++. ..+|+ .+++.+...
T Consensus 700 l~inl~~d-~~~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~~~~~~~------ 763 (867)
T TIGR01524 700 LIQNLLYD-FSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFD----IATFL-----LMWFVFSAN------ 763 (867)
T ss_pred HHHHHHHH-HHHHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHH----HHHHH-----HHHHHhccc------
Confidence 3 999 7999999999999999888 2334444454222110 00011 000011000
Q ss_pred CCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 927 KGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 927 ~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
+. .....-+|+.|++++++|++|+||+|+++
T Consensus 764 -~~----~~~~~~~t~~f~~~~~~~~~~~~~~R~~~ 794 (867)
T TIGR01524 764 -TV----EEQALFQSGWFVVGLLSQTLVVHMIRTEK 794 (867)
T ss_pred -ch----hhhhHHHHHHHHHHHHHHHHHHHhhCcCC
Confidence 00 00112258889999999999999999863
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-105 Score=993.82 Aligned_cols=705 Identities=33% Similarity=0.509 Sum_probs=543.5
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH---H-HHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA---S-TNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGV 115 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 115 (962)
+.+-.+...||.|.+..+++...++.. + ..+..++.+++.+++++. ..|.++++++++++++..++.
T Consensus 28 ~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---------g~~~~~~~i~~~i~~~~~i~~ 98 (884)
T TIGR01522 28 QEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---------GNIDDAVSITLAILIVVTVGF 98 (884)
T ss_pred HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH---------cchhhHHHHHhHHHHHHHHHH
Confidence 457778889999999877654333222 3 233333333333332221 246778888888888899999
Q ss_pred HHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcc
Q psy886 116 WQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVS 195 (962)
Q Consensus 116 ~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~P 195 (962)
++|+|+++++++|.++.|.+++|+|||+ +++|+++||+|||+|.|++||+|||||+|+
T Consensus 99 ~qe~~a~~~l~~L~~l~~~~~~ViRdg~--~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii-------------------- 156 (884)
T TIGR01522 99 VQEYRSEKSLEALNKLVPPECHLIREGK--LEHVLASTLVPGDLVCLSVGDRVPADLRIV-------------------- 156 (884)
T ss_pred HHHHHHHHHHHHHhccCCCeeEEEECCE--EEEEEHHHCccCCEEEecCCCEEeeeEEEE--------------------
Confidence 9999999999999999999999999887 555555555555555555555555555555
Q ss_pred eeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEE
Q psy886 196 VIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVE 275 (962)
Q Consensus 196 v~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~ 275 (962)
T Consensus 157 -------------------------------------------------------------------------------- 156 (884)
T TIGR01522 157 -------------------------------------------------------------------------------- 156 (884)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCC-ccCCCCCcceEecCceeeeceEEEEEEEeccchh
Q psy886 276 VSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDP-RAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTA 354 (962)
Q Consensus 276 l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~-~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~ 354 (962)
+ +.++.||||+|||||.|+.|.++..++. .....+++|++|+||.|.+|+++++|++||.+|+
T Consensus 157 --------------~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~ 220 (884)
T TIGR01522 157 --------------E--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTE 220 (884)
T ss_pred --------------E--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccH
Confidence 3 2357799999999999999998653322 1234578899999999999999999999999999
Q ss_pred hHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCch
Q psy886 355 IGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434 (962)
Q Consensus 355 ~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~L 434 (962)
+|||++++++.+..+||+|+.++++++++..++++++++++++.+ + .+.+|. ..+..++++++++|||+|
T Consensus 221 ~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~--~----~~~~~~----~~~~~~v~llv~aiP~~L 290 (884)
T TIGR01522 221 FGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW--F----QGKDWL----EMFTISVSLAVAAIPEGL 290 (884)
T ss_pred HHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H----hcCCHH----HHHHHHHHHHHHHccchH
Confidence 999999999888889999999999999988776655555444432 1 122343 357788999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcccc
Q psy886 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEP 514 (962)
Q Consensus 435 p~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (962)
|++++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|+|+|++++..++.+. ..++..+++
T Consensus 291 p~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~--------~~~~~~~~~ 362 (884)
T TIGR01522 291 PIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHT--------MLNAVSLNQ 362 (884)
T ss_pred HHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEe--------eccCCccCC
Confidence 999999999999999999999999999999999999999999999999999999987553211 011111112
Q ss_pred CcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhh
Q psy886 515 IGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAV 594 (962)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~ 594 (962)
.+....++........+.+.+++..+++||++...... ....|||+|.|++.++.+.|..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~~~g~p~e~All~~~~~~~~~---------------- 422 (884)
T TIGR01522 363 FGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA----DTLLGNPTDVALIELLMKFGLD---------------- 422 (884)
T ss_pred CCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC----CCcCCChHHHHHHHHHHHcCcH----------------
Confidence 11111111111111123456677788899988654321 1245999999999999876641
Q ss_pred hhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhccccccc-CCeeeeCCHHHHHHHHHHH
Q psy886 595 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI-GSQKFPLTATLKNRILDLT 673 (962)
Q Consensus 595 ~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~ 673 (962)
..+..|+++.++||+|+||||+++++... ++++++|+|||||.|+++|+++.. ++...+++++.++++.+..
T Consensus 423 --~~~~~~~~~~~~pF~s~~k~m~v~~~~~~-----~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~ 495 (884)
T TIGR01522 423 --DLRETYIRVAEVPFSSERKWMAVKCVHRQ-----DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495 (884)
T ss_pred --hHHhhCcEEeEeCCCCCCCeEEEEEEEcC-----CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHH
Confidence 12345788999999999999999887532 126789999999999999998754 4666788888899999888
Q ss_pred HHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCH
Q psy886 674 RQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 753 (962)
Q Consensus 674 ~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~ 753 (962)
++++ ++|+|++++||++. +.+|+|+|+++++||||||++++|++||++||+++|+||||+
T Consensus 496 ~~~a--~~G~rvl~~A~~~~------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~ 555 (884)
T TIGR01522 496 AEMA--SAGLRVIAFASGPE------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQ 555 (884)
T ss_pred HHHH--hcCCEEEEEEEEcC------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCH
Confidence 8885 89999999999864 368999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCc-c-----------------------------------------------------ccCCCCCc
Q psy886 754 ATAEAICRRIGVFTEEE-D-----------------------------------------------------TTGKSYSK 779 (962)
Q Consensus 754 ~TA~~IA~~~GI~~~~~-~-----------------------------------------------------~~g~~l~~ 779 (962)
+||.+||+++||..... . ++.+++++
T Consensus 556 ~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~ 635 (884)
T TIGR01522 556 ETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKL 635 (884)
T ss_pred HHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHh
Confidence 99999999999974211 1 12223469
Q ss_pred CcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-
Q psy886 780 AEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI- 857 (962)
Q Consensus 780 AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q- 857 (962)
|||||||| +|+|+||++||+||+||||++|++++++||++|+||||++.|+++.|++++++++++.+++.|.||+|+|
T Consensus 636 AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qi 715 (884)
T TIGR01522 636 ADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQI 715 (884)
T ss_pred CCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHH
Confidence 99999999 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H----hhCcccccccccCCCCcCccchh-------H-----HHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccC
Q psy886 858 S----TTNRGKKKKLSYNFLDISLLGPA-------I-----HYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLG 921 (962)
Q Consensus 858 L----~~d~~~a~al~~e~~~~~~m~~p-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (962)
| ++|.+|+++|++|||++++|+|| + ++++++.|+...+.. .+.|+ +.+ +.
T Consensus 716 L~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~--------~~~-~~- 781 (884)
T TIGR01522 716 LWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGT----LFVFV--------REM-QD- 781 (884)
T ss_pred HHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHH----HHHHH--------HHH-cC-
Confidence 3 99999999999999999999986 2 233333333211110 00011 000 00
Q ss_pred CCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 922 GGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
+ .....++||+|++|+++|+||+||||++
T Consensus 782 ------~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~ 810 (884)
T TIGR01522 782 ------G-----VITARDTTMTFTCFVFFDMFNALACRSQ 810 (884)
T ss_pred ------C-----cchhhHHHHHHHHHHHHHHHHHHHHccC
Confidence 1 0123578999999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-105 Score=992.66 Aligned_cols=721 Identities=29% Similarity=0.372 Sum_probs=537.1
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||+|.+..+++...++.. ...+++++++++++++.+............|.++++++++++++.+
T Consensus 64 ~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~ 143 (941)
T TIGR01517 64 STLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVL 143 (941)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhH
Confidence 457788889999999887764433322 2233444444444443221100111233468889999988999999
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccC
Q psy886 113 VGVWQERNAESAIEALKEY-EPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 191 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTG 191 (962)
++.++++++++++++|.+. .+.+++|+|||+ +++|++++|+|||+|.|++||+|||||+|++|
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~--~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g-------------- 207 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQ--EQQISIHDIVVGDIVSLSTGDVVPADGVFISG-------------- 207 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCE--EEEEeHHHCCCCCEEEECCCCEecccEEEEEc--------------
Confidence 9999999999999999874 477999999988 67777777777777777777777777777742
Q ss_pred CCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC
Q psy886 192 ESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 271 (962)
Q Consensus 192 Es~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G 271 (962)
T Consensus 208 -------------------------------------------------------------------------------- 207 (941)
T TIGR01517 208 -------------------------------------------------------------------------------- 207 (941)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEecc
Q psy886 272 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 272 DIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
.++.||||+|||||.|+.|.++ ..|++|+||.+.+|+++++|++||+
T Consensus 208 ----------------------~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~ 254 (941)
T TIGR01517 208 ----------------------LSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGV 254 (941)
T ss_pred ----------------------CcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCC
Confidence 2445666666666666666532 2379999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cCCCCCC-----cchHHHHHHHHHHHHH
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHF-NDPAHGG-----SWIKGAVYYFKIAVAL 425 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~-~~~~~~~-----~~~~~~~~~~~~~i~l 425 (962)
+|++|||++++..++ +++|+|++++++++++..++++++++++++++..+ ....... .....+...+..++++
T Consensus 255 ~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~l 333 (941)
T TIGR01517 255 NSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTI 333 (941)
T ss_pred CcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHH
Confidence 999999999988765 57899999999999998877776666655442111 0000000 0112334568889999
Q ss_pred HHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceE
Q psy886 426 AVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEF 505 (962)
Q Consensus 426 ~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 505 (962)
++++|||+||++++++++.++++|+|+|+++|+++++|+||++++||||||||||+|+|+|++++..+..++.+.
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~----- 408 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD----- 408 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999987543221100
Q ss_pred EEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCC
Q psy886 506 EITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGL 585 (962)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~ 585 (962)
. . ... .+...+++..++.||+.........+.++..|||+|.|++.++.+.+....
T Consensus 409 ------------~-~-----~~~-~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~----- 464 (941)
T TIGR01517 409 ------------V-L-----RNV-PKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ----- 464 (941)
T ss_pred ------------c-c-----ccC-CHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-----
Confidence 0 0 000 123444555556666543321111123456799999999999987664110
Q ss_pred chhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccc-cCCeeeeCCHH
Q psy886 586 GRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHAR-IGSQKFPLTAT 664 (962)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~-~~~~~~~l~~~ 664 (962)
..+..|+++.++||+|+||+|+++++..+ +++++|+|||||.++++|+++. .++...++++
T Consensus 465 -----------~~~~~~~~~~~~pF~s~~k~msvv~~~~~------~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~- 526 (941)
T TIGR01517 465 -----------EVRAEEKVVKIYPFNSERKFMSVVVKHSG------GKVREFRKGASEIVLKPCRKRLDSNGEATPISD- 526 (941)
T ss_pred -----------HHHhhchhccccccCCCCCeEEEEEEeCC------CcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-
Confidence 12345677889999999999999988542 1578999999999999998754 3556667776
Q ss_pred HHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCE
Q psy886 665 LKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIR 744 (962)
Q Consensus 665 ~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~ 744 (962)
.++++.+..++++ ++|+|++++||++.+.++.. ..+..|+||+|+|+++++||||+|++++|++||+|||+
T Consensus 527 ~~~~i~~~~~~~a--~~G~Rvl~~A~~~~~~~~~~-------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~ 597 (941)
T TIGR01517 527 DKDRCADVIEPLA--SDALRTICLAYRDFAPEEFP-------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGIT 597 (941)
T ss_pred HHHHHHHHHHHHH--hcCCEEEEEEEEecCccccc-------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCE
Confidence 6788888888886 89999999999987543211 11234789999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCCC-cc----------------------------------------------------
Q psy886 745 VIVITGDNKATAEAICRRIGVFTEE-ED---------------------------------------------------- 771 (962)
Q Consensus 745 v~MiTGD~~~TA~~IA~~~GI~~~~-~~---------------------------------------------------- 771 (962)
|+|+||||+.||.+||++|||.+++ ..
T Consensus 598 v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDG 677 (941)
T TIGR01517 598 VRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDG 677 (941)
T ss_pred EEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 9999999999999999999997422 11
Q ss_pred -ccCCCCCcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCC
Q psy886 772 -TTGKSYSKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGL 849 (962)
Q Consensus 772 -~~g~~l~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 849 (962)
++.++|++|||||||| +|||+||+|||+||+||||++|+++|++||++|+||+|++.|.+++|+.++++.+++.+++.
T Consensus 678 vNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~ 757 (941)
T TIGR01517 678 TNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 757 (941)
T ss_pred CchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2223446999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHH-H----hhCcccccccccCCCCcCccchh-------H----HHH-HHHHhhhHHhhhcCCCcEEEeccchhh
Q psy886 850 PEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-------I----HYQ-VDLTGGPDQVYLSGLPDSIYYLPTTVF 912 (962)
Q Consensus 850 ~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-------~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (962)
|.||+|+| | ++|.+|+++|++|||++++|+|| + +++ +++.|....+.. ...|++ .+
T Consensus 758 ~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~----~~~~~~---~~ 830 (941)
T TIGR01517 758 TSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVT----FILLFA---GG 830 (941)
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH----HHHHHH---HH
Confidence 99999999 3 99999999999999999999877 2 233 333333211100 000000 00
Q ss_pred hhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 913 ATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
++++... +..|......+++|++|++|+++|+||+||+|+.
T Consensus 831 --~~~~~~~------~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~ 871 (941)
T TIGR01517 831 --SIFDVSG------PDEITSHQQGELNTIVFNTFVLLQLFNEINARKL 871 (941)
T ss_pred --hhhcccC------cccccccccchhhHHHHHHHHHHHHHHHHHHccC
Confidence 0010000 0001111234678999999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-104 Score=886.81 Aligned_cols=607 Identities=33% Similarity=0.543 Sum_probs=513.5
Q ss_pred HHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcc
Q psy886 230 QLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVS 309 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~p 309 (962)
..|.+..+.++++++|+|..|+|+|||+ .+.+.+++||+||+|.++-||+||||.|+++ +..+++|+|+|||||+|
T Consensus 145 ~qe~ks~~im~sF~~l~P~~~~ViRdg~--k~~i~~eelVvGD~v~vk~GdrVPADiRiis--~~g~~vdnsslTGesEP 220 (1019)
T KOG0203|consen 145 YQEAKSSKIMDSFKNLVPQQALVIRDGE--KMTINAEELVVGDLVEVKGGDRVPADIRIIS--ATGCKVDNSSLTGESEP 220 (1019)
T ss_pred ccchhhHHHHHHHhccchhhheeeecce--eEEechhhcccccceeeccCCcccceeEEEE--ecceeEeccccccccCC
Confidence 4678899999999999999999999998 6899999999999999999999999999997 56899999999999999
Q ss_pred eeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHH
Q psy886 310 VIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISI 389 (962)
Q Consensus 310 v~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~ 389 (962)
..+.+...... ..+..|+.|.+|.+.+|.++++|++||.+|.+|+|+.+....+..++|++++++++..++..+++.
T Consensus 221 ~~~~~~~t~~~---~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~ 297 (1019)
T KOG0203|consen 221 QTRSPEFTHEN---PLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF 297 (1019)
T ss_pred ccCCccccccC---chhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH
Confidence 99988654332 278899999999999999999999999999999999999888899999999999999999988888
Q ss_pred HHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCee
Q psy886 390 ICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTS 469 (962)
Q Consensus 390 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~ 469 (962)
+.+.+|++.... +..|+.. +...+.++++.+|+|||+++|.++..-++||+++++++|++.++|+||+.+
T Consensus 298 ~~i~fF~~~~~~------gy~~l~a----vv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts 367 (1019)
T KOG0203|consen 298 LGISFFILALIL------GYEWLRA----VVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTS 367 (1019)
T ss_pred HHHHHHHHHHhh------cchhHHH----hhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccce
Confidence 888777665421 3455543 344788899999999999999999999999999999999999999999999
Q ss_pred EEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccc
Q psy886 470 VICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAID 549 (962)
Q Consensus 470 ~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~ 549 (962)
+||+|||||||+|+|+|.++|.++.+...+.. .+..+.. . .........+.+++.+||.+...
T Consensus 368 ~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~---~~~~~~~-------------~-~~~~~~~~~l~r~~~lCn~a~~~ 430 (1019)
T KOG0203|consen 368 TICSDKTGTLTQNRMTVAHLWFDNQIHEADTT---EDQSGQS-------------F-DKSSATFIALSRIATLCNRAVFK 430 (1019)
T ss_pred eEeecceeeEEecceEEEeeccCCceeeeech---hhhhccc-------------c-cccCchHHHHHHHHHHhCcceec
Confidence 99999999999999999999998765332211 0000000 0 01134567788899999999875
Q ss_pred ccccc---CceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCC
Q psy886 550 FNEFK---QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKS 626 (962)
Q Consensus 550 ~~~~~---~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~ 626 (962)
..+.. -.....||+.|.||++++...-.. ....++.++.+.++||+|.+|+.-.+++..+.
T Consensus 431 ~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~----------------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~ 494 (1019)
T KOG0203|consen 431 PGQDDVPVLKRDVAGDASEVALLKFIELILGS----------------VMELRERNPKVAEIPFNSTNKYQLSIHETEDP 494 (1019)
T ss_pred ccccCCceeeeeccCCHHHHHHHHHHHHhcch----------------HHHHHHhhHHhhcCCcccccceEEEEEecCCC
Confidence 43321 123457999999999999764321 01256778889999999999998888876543
Q ss_pred CCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccc-cc
Q psy886 627 SKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLA-DS 705 (962)
Q Consensus 627 ~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~-~~ 705 (962)
.+.+..+.+|||||.++++|+.+.+.++..|+++..++.+...+.+++ ..|-||++||++.++.++...... +.
T Consensus 495 ---~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg--~~GerVlgF~~~~l~~~~~p~~~~f~~ 569 (1019)
T KOG0203|consen 495 ---SDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELG--GLGERVLGFCDLELPDEKFPRGFQFDT 569 (1019)
T ss_pred ---CCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhh--hcchHHHHHHHHhcchhcCCCceEeec
Confidence 233678899999999999999999999999999999999999999986 899999999998877542211100 00
Q ss_pred cccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc--------------
Q psy886 706 TKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED-------------- 771 (962)
Q Consensus 706 ~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~-------------- 771 (962)
.....--.++.|+|++++.||||..+|+||.+||.|||||+|+||||+.||++||++.||+.+...
T Consensus 570 d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~ 649 (1019)
T KOG0203|consen 570 DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVE 649 (1019)
T ss_pred CCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCccc
Confidence 011112368999999999999999999999999999999999999999999999999998753210
Q ss_pred -----------ccCCCC-------------------------------------------------------CcCcEEEe
Q psy886 772 -----------TTGKSY-------------------------------------------------------SKAEIGIA 785 (962)
Q Consensus 772 -----------~~g~~l-------------------------------------------------------~~AdVGIA 785 (962)
+.|.++ ++||||||
T Consensus 650 ~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVA 729 (1019)
T KOG0203|consen 650 QVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVA 729 (1019)
T ss_pred ccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccccee
Confidence 223332 49999999
Q ss_pred cc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----h
Q psy886 786 MG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----T 859 (962)
Q Consensus 786 mg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~ 859 (962)
|| +||||+|+||||||+||||+|||..|+|||-+|+|+||.|.|.|++|++|+.+++++.++|+|+||.+++ | .
T Consensus 730 MGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLg 809 (1019)
T KOG0203|consen 730 MGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLG 809 (1019)
T ss_pred eccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhh
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999 4 9
Q ss_pred hCcccccccccCCCCcCccchh--------------HHHHHHHHhh
Q psy886 860 TNRGKKKKLSYNFLDISLLGPA--------------IHYQVDLTGG 891 (962)
Q Consensus 860 ~d~~~a~al~~e~~~~~~m~~p--------------~~~~~~~~~~ 891 (962)
||..||++||||+||.|||+|| +.+.|+.+|.
T Consensus 810 TDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~ 855 (1019)
T KOG0203|consen 810 TDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGM 855 (1019)
T ss_pred cccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHH
Confidence 9999999999999999999887 4778888887
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=922.78 Aligned_cols=647 Identities=27% Similarity=0.385 Sum_probs=501.3
Q ss_pred HHHhhhhhhccCccccCCCChhHHHH--HHH----HHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIA--STN----FAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVG 114 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 114 (962)
.+-.+...||+|.+..+.+..+.+.. +.. ++++++++++++ ..|.++++++++++++..++
T Consensus 6 ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------------~~~~~~~~i~~~~~i~~~i~ 72 (755)
T TIGR01647 6 EAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------------ENWVDFVIILGLLLLNATIG 72 (755)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------------cchhhhhhhhhhhHHHHHHH
Confidence 35667888999999776554432222 222 222233333222 24778889999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCc
Q psy886 115 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194 (962)
Q Consensus 115 ~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~ 194 (962)
+++|+|+++++++|.++.+.+++|+|||+ +++||++||+|||+|.|++||+|||||+|++|.
T Consensus 73 ~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~--~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~---------------- 134 (755)
T TIGR01647 73 FIEENKAGNAVEALKQSLAPKARVLRDGK--WQEIPASELVPGDVVRLKIGDIVPADCRLFEGD---------------- 134 (755)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEECCE--EEEEEhhhCcCCCEEEECCCCEEeceEEEEecC----------------
Confidence 99999999999999999999999999998 677888777777777777777777777777532
Q ss_pred ceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEE
Q psy886 195 SVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIV 274 (962)
Q Consensus 195 Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV 274 (962)
T Consensus 135 -------------------------------------------------------------------------------- 134 (755)
T TIGR01647 135 -------------------------------------------------------------------------------- 134 (755)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchh
Q psy886 275 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTA 354 (962)
Q Consensus 275 ~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~ 354 (962)
++.||||+|||||.|+.|.++ |++|+||.+.+|+++++|++||++|+
T Consensus 135 --------------------~~~VDeS~LTGES~PV~K~~~-------------~~v~aGT~v~~G~~~~~V~~tG~~T~ 181 (755)
T TIGR01647 135 --------------------YIQVDQAALTGESLPVTKKTG-------------DIAYSGSTVKQGEAEAVVTATGMNTF 181 (755)
T ss_pred --------------------ceEEEcccccCCccceEeccC-------------CeeeccCEEEccEEEEEEEEcCCccH
Confidence 245666666666666666542 78999999999999999999999999
Q ss_pred hHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCch
Q psy886 355 IGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434 (962)
Q Consensus 355 ~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~L 434 (962)
+|||++++++++..++|+|+.++++++++.+++++++++++++++... +.+|. ..+..++++++++|||+|
T Consensus 182 ~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~----~~~~~~i~vlv~a~P~~L 252 (755)
T TIGR01647 182 FGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR-----GESFR----EGLQFALVLLVGGIPIAM 252 (755)
T ss_pred HHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCHH----HHHHHHHHHHHHhCCcch
Confidence 999999999888889999999999999999888888877776654211 22333 357789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcccc
Q psy886 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEP 514 (962)
Q Consensus 435 p~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (962)
|++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 253 p~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~------------------- 313 (755)
T TIGR01647 253 PAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG------------------- 313 (755)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------------
Confidence 9999999999999999999999999999999999999999999999999999998764310
Q ss_pred CcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhh
Q psy886 515 IGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAV 594 (962)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~ 594 (962)
.+.+ +++..+++|++. ..+||+|.|++.++.+.+.
T Consensus 314 -------------~~~~---~~l~~a~~~~~~------------~~~~pi~~Ai~~~~~~~~~----------------- 348 (755)
T TIGR01647 314 -------------FDKD---DVLLYAALASRE------------EDQDAIDTAVLGSAKDLKE----------------- 348 (755)
T ss_pred -------------CCHH---HHHHHHHHhCCC------------CCCChHHHHHHHHHHHhHH-----------------
Confidence 0011 233444555421 1479999999998765321
Q ss_pred hhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHH
Q psy886 595 RQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTR 674 (962)
Q Consensus 595 ~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~ 674 (962)
....|++...+||+|.+|+|+++++..+. ++.++++|||||.++++|++. .+.++++.+..+
T Consensus 349 ---~~~~~~~~~~~pf~~~~k~~~~~v~~~~~-----g~~~~~~kGa~e~il~~c~~~----------~~~~~~~~~~~~ 410 (755)
T TIGR01647 349 ---ARDGYKVLEFVPFDPVDKRTEATVEDPET-----GKRFKVTKGAPQVILDLCDNK----------KEIEEKVEEKVD 410 (755)
T ss_pred ---HHhcCceEEEeccCCCCCeEEEEEEeCCC-----ceEEEEEeCChHHHHHhcCCc----------HHHHHHHHHHHH
Confidence 23457788899999999999998875321 145788999999999999742 345566777778
Q ss_pred HHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy886 675 QYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA 754 (962)
Q Consensus 675 ~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~ 754 (962)
+++ ++|+|++++||++. |++|+|+|+++++||||||++++|++||++||+|+|+||||+.
T Consensus 411 ~~~--~~G~rvl~vA~~~~------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 470 (755)
T TIGR01647 411 ELA--SRGYRALGVARTDE------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLA 470 (755)
T ss_pred HHH--hCCCEEEEEEEEcC------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 875 89999999999721 4789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC---------------------------------------------------------CccccCCCC
Q psy886 755 TAEAICRRIGVFTE---------------------------------------------------------EEDTTGKSY 777 (962)
Q Consensus 755 TA~~IA~~~GI~~~---------------------------------------------------------~~~~~g~~l 777 (962)
||.+||+++||... |+.++.++|
T Consensus 471 tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL 550 (755)
T TIGR01647 471 IAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPAL 550 (755)
T ss_pred HHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHH
Confidence 99999999999641 111223345
Q ss_pred CcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH
Q psy886 778 SKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI 857 (962)
Q Consensus 778 ~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q 857 (962)
++||||||||+|||+||+||||||+||||++|+++|++||++|+|||||+.|.+++|++++++++++.++ ++.||+|+|
T Consensus 551 ~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~ 629 (755)
T TIGR01647 551 KKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIM 629 (755)
T ss_pred HhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999888777653 345599999
Q ss_pred -H----hhCcccccccccCCCCcCccchh-------HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCc
Q psy886 858 -S----TTNRGKKKKLSYNFLDISLLGPA-------IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDE 925 (962)
Q Consensus 858 -L----~~d~~~a~al~~e~~~~~~m~~p-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (962)
| ++|. +++++++|++++. ++| ++.+.++.|...++.. ...|++ .+... +..+.
T Consensus 630 il~~~l~~d~-~~~~l~~~~~~~~--~~p~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~-~~~~~--~~~~~----- 694 (755)
T TIGR01647 630 VVIIAILNDG-TIMTIAYDNVKPS--KLPQRWNLREVFTMSTVLGIYLVIST----FLLLAI-ALDTS--FFIDK----- 694 (755)
T ss_pred HHHHHHHHhH-hHhhccCCCCCCC--CCCCccchHHHHHHHHHHHHHHHHHH----HHHHHH-HHhcc--cchhc-----
Confidence 3 8885 7999999999986 555 2333444444222110 000100 00000 00000
Q ss_pred cCCCccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 926 FKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 926 ~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
+ +. .....+++|++|+.+++.|+|++|++|+++
T Consensus 695 ~-~~---~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 727 (755)
T TIGR01647 695 F-GL---QLLHGNLQSLIYLQVSISGQATIFVTRTHG 727 (755)
T ss_pred c-cc---cccHhhhHHHHHHHHHHHHHHHHheeccCC
Confidence 0 00 012335789999999999999999999874
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-93 Score=899.84 Aligned_cols=653 Identities=21% Similarity=0.246 Sum_probs=499.5
Q ss_pred HHHHhhhhhhccCccccCCCChhH--HHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENV--HIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQ 117 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (962)
..+..+...||.|.+..+.+.... .....++.+++.++++++|+.. ++|.++++++++++++..+..++
T Consensus 143 ~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~~~~~~~~ 213 (1054)
T TIGR01657 143 GDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTSISLSVYQ 213 (1054)
T ss_pred HHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 346677888999999877654333 2336667777777777777652 34778899999999999999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEc--CCCccCCCceEEeeecceeeeecccccCCCcc
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVS--VGDKIPADIRLIKIYSTTIRIDQSILTGESVS 195 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~--~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~P 195 (962)
++|+.++++++.. .+..++|+|||+ |++|+++||+|||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 214 ~~k~~~~L~~~~~-~~~~v~V~Rdg~--~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g---~~~VdES~LTGES~P 287 (1054)
T TIGR01657 214 IRKQMQRLRDMVH-KPQSVIVIRNGK--WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG---SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHhhc-CCeeEEEEECCE--EEEEEcccCCCCCEEEEecCCCCEecceEEEEeC---cEEEecccccCCccc
Confidence 9999999988766 477999999998 899999999999999999 99999999999976 466999999999999
Q ss_pred eeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEE
Q psy886 196 VIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVE 275 (962)
Q Consensus 196 v~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~ 275 (962)
+.|.+...+.. ||
T Consensus 288 v~K~~~~~~~~----------------------------------------------------------------~~--- 300 (1054)
T TIGR01657 288 VLKFPIPDNGD----------------------------------------------------------------DD--- 300 (1054)
T ss_pred eecccCCcccc----------------------------------------------------------------cc---
Confidence 99976521000 00
Q ss_pred eCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeee-------ceEEEEEEE
Q psy886 276 VSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAA-------GKARGIVMG 348 (962)
Q Consensus 276 l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~-------G~~~~vV~~ 348 (962)
.. ++ ....+++|++|+||.|.+ |.++++|++
T Consensus 301 ------------------~~--~~----------------------~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~ 338 (1054)
T TIGR01657 301 ------------------ED--LF----------------------LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVR 338 (1054)
T ss_pred ------------------cc--cc----------------------ccccccceEEEcCCEEEEEecCCCCCcEEEEEEe
Confidence 00 00 001245699999999985 789999999
Q ss_pred eccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHh
Q psy886 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVA 428 (962)
Q Consensus 349 tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~ 428 (962)
||.+|..|++.+++...+..++++++.+.++...+..++++.++++++... . .+.+| ...++.+++++++
T Consensus 339 TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~--~----~~~~~----~~~~l~~l~iiv~ 408 (1054)
T TIGR01657 339 TGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI--K----DGRPL----GKIILRSLDIITI 408 (1054)
T ss_pred CCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--H----cCCcH----HHHHHHHHHHHHh
Confidence 999999999999998888889999999998887776555444333333221 1 12233 3467889999999
Q ss_pred hcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEe
Q psy886 429 AIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEIT 508 (962)
Q Consensus 429 ~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~ 508 (962)
+|||+||++++++++++++||+|+|++||+++++|++|+++++|||||||||+|+|+|.+++..+.... . .
T Consensus 409 ~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~----~-----~ 479 (1054)
T TIGR01657 409 VVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQE----F-----L 479 (1054)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccc----c-----c
Confidence 999999999999999999999999999999999999999999999999999999999999986542100 0 0
Q ss_pred CCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchh
Q psy886 509 GSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588 (962)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~ 588 (962)
.... + ........+..+++.||+.....+ ...|||+|.|+++++... ............
T Consensus 480 ~~~~--------~------~~~~~~~~~~~~~a~C~~~~~~~~------~~~Gdp~E~al~~~~~~~-~~~~~~~~~~~~ 538 (1054)
T TIGR01657 480 KIVT--------E------DSSLKPSITHKALATCHSLTKLEG------KLVGDPLDKKMFEATGWT-LEEDDESAEPTS 538 (1054)
T ss_pred cccc--------c------ccccCchHHHHHHHhCCeeEEECC------EEecCHHHHHHHHhCCCE-EECCCCcccccc
Confidence 0000 0 000112234556789998754321 467999999999876321 000000000000
Q ss_pred hH-HHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHH
Q psy886 589 EQ-AIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKN 667 (962)
Q Consensus 589 ~~-~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~ 667 (962)
.. ... .......++++.++||+|+|||||++++..+. ++.++|+|||||.|+++|++.. .++
T Consensus 539 ~~~~i~-~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~-----~~~~~~~KGApE~Il~~c~~~~-----------~p~ 601 (1054)
T TIGR01657 539 ILAVVR-TDDPPQELSIIRRFQFSSALQRMSVIVSTNDE-----RSPDAFVKGAPETIQSLCSPET-----------VPS 601 (1054)
T ss_pred ccccee-ccCCCceEEEEEEEeecCCCCEEEEEEEEcCC-----CeEEEEEECCHHHHHHHcCCcC-----------CCh
Confidence 00 000 00012468899999999999999999986431 1567999999999999998521 134
Q ss_pred HHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEE
Q psy886 668 RILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIV 747 (962)
Q Consensus 668 ~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~M 747 (962)
.+.+..++|+ ++|+||||+|||+++....+ ......++++|+||+|+|+++|+||+||+++++|+.||+|||+|+|
T Consensus 602 ~~~~~~~~~a--~~G~RVLalA~k~l~~~~~~--~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~m 677 (1054)
T TIGR01657 602 DYQEVLKSYT--REGYRVLALAYKELPKLTLQ--KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVM 677 (1054)
T ss_pred hHHHHHHHHH--hcCCEEEEEEEeecCccchh--hhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEE
Confidence 5666777785 89999999999988632111 0011224567999999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCc------------------------------------------------------ccc
Q psy886 748 ITGDNKATAEAICRRIGVFTEEE------------------------------------------------------DTT 773 (962)
Q Consensus 748 iTGD~~~TA~~IA~~~GI~~~~~------------------------------------------------------~~~ 773 (962)
+||||+.||.+||++|||++++. .++
T Consensus 678 iTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 757 (1054)
T TIGR01657 678 ITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMS 757 (1054)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEE
Confidence 99999999999999999975431 112
Q ss_pred CCCC--------------------------------------------------------CcCcEEEeccChhHHHHhhc
Q psy886 774 GKSY--------------------------------------------------------SKAEIGIAMGSGTAVAKSAS 797 (962)
Q Consensus 774 g~~l--------------------------------------------------------~~AdVGIAmg~gtdvAkeaA 797 (962)
|+++ ++||||||||.+ |++ +||
T Consensus 758 G~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA 835 (1054)
T TIGR01657 758 GKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAA 835 (1054)
T ss_pred cHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eec
Confidence 2111 499999999854 555 999
Q ss_pred ccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCC
Q psy886 798 EMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNF 872 (962)
Q Consensus 798 DivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~ 872 (962)
|++++||||++|+++|+|||+++.|+++.++|.+.+++.+.+.+++..+. +.||+++| | ++|.+++++|+.+|
T Consensus 836 ~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~l~~~Q~l~i~li~~~~~~l~l~~~~ 913 (1054)
T TIGR01657 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI--GSNLGDGQFLTIDLLLIFPVALLMSRNK 913 (1054)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCcCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999987776655544 47899999 4 99999999999999
Q ss_pred CCcCccchh
Q psy886 873 LDISLLGPA 881 (962)
Q Consensus 873 ~~~~~m~~p 881 (962)
|++++|++|
T Consensus 914 p~~~l~~~~ 922 (1054)
T TIGR01657 914 PLKKLSKER 922 (1054)
T ss_pred chhhcCCCC
Confidence 999999876
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-86 Score=831.65 Aligned_cols=707 Identities=20% Similarity=0.233 Sum_probs=497.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE
Q psy886 60 SENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI 139 (962)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~ 139 (962)
+..++.++..+..++.++..++......... .....+...++++++..+..+++.++++++.+.+ .++.++|+
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~------n~~~~~v~ 90 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPT-YRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEV------NNRLTEVL 90 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-CccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHH------hCcEEEEE
Confidence 3555666777777777777777766433222 1233344444444455556666666666665433 46799999
Q ss_pred EC-CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeec--ceeeeecccccCCCcceeecCCCCCCcccccCCCccc
Q psy886 140 RG-DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMC 216 (962)
Q Consensus 140 r~-~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~--~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~ 216 (962)
|+ |+ ++++++++|+|||+|.|++||+|||||+|++.+. +.++||||+|||||.|+.|.+...+.... ...
T Consensus 91 ~~~~~--~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~---~~~-- 163 (1057)
T TIGR01652 91 EGHGQ--FVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML---DED-- 163 (1057)
T ss_pred CCCCc--EEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC---Chh--
Confidence 97 66 8999999999999999999999999999998544 56899999999999999998653221100 000
Q ss_pred cccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecc-eEEEEeecCCe
Q psy886 217 ENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPA-DIRLIKIYSTT 295 (962)
Q Consensus 217 ~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPa-D~~ll~~~~~~ 295 (962)
.+.+. +.. |..++ |- |.-.. .|.
T Consensus 164 ------------------------~~~~~---~~~----------------------i~~~~----p~~~l~~F---~G~ 187 (1057)
T TIGR01652 164 ------------------------DIKNF---SGE----------------------IECEQ----PNASLYSF---QGN 187 (1057)
T ss_pred ------------------------hHhhc---eEE----------------------EEEcC----CCCcceEE---EEE
Confidence 00000 000 00000 00 00001 122
Q ss_pred EEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeee-ceEEEEEEEeccchhhHHHHhhccccccCCCchHH
Q psy886 296 IRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAA-GKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQ 374 (962)
Q Consensus 296 l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~-G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~ 374 (962)
+.++.. + ..+.+.+|++|+||.+.+ |+++|+|+|||++|++ .++....+.++|++++
T Consensus 188 ~~~~~~----~---------------~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~~n~~~~~~k~s~le~ 245 (1057)
T TIGR01652 188 MTINGD----R---------------QYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---MRNATQAPSKRSRLEK 245 (1057)
T ss_pred EEECCC----C---------------cccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---hhcCCCCcccccHHHH
Confidence 222210 1 123456799999999998 9999999999999955 4556666788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcc-----------hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHH
Q psy886 375 KLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSW-----------IKGAVYYFKIAVALAVAAIPEGLPAVITTCLA 443 (962)
Q Consensus 375 ~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~ 443 (962)
+++++..+++.+.+++|++.+++...+.... ....| ....+..|..++.+++.+||++||++++++++
T Consensus 246 ~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~ 324 (1057)
T TIGR01652 246 ELNFLIIILFCLLFVLCLISSVGAGIWNDAH-GKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKS 324 (1057)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHheeccc-CCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHH
Confidence 9999999998888888877776543221100 01122 22344567889999999999999999999999
Q ss_pred HHH------HHHhhh----cCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcc-eEEEeCCc-
Q psy886 444 LGT------RRMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFL-EFEITGST- 511 (962)
Q Consensus 444 ~~~------~~m~k~----~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-~~~~~~~~- 511 (962)
+++ .+|.++ +++||+++++|+||+|++||||||||||+|+|+++++++++..|+...... ....+..+
T Consensus 325 ~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~ 404 (1057)
T TIGR01652 325 VQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGS 404 (1057)
T ss_pred HHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccc
Confidence 999 788875 499999999999999999999999999999999999999887665321100 00000000
Q ss_pred cccCc-------c-ee------cCCCccCCCChHHHHHHHHHHhhccCCccccccc--cCceEEecChhHHHHHHHHHHc
Q psy886 512 YEPIG-------D-VF------LNGSKIKGADYETLHELGTICIMCNDSAIDFNEF--KQAFEKVGEATETALIVLAEKL 575 (962)
Q Consensus 512 ~~~~~-------~-~~------~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~--~~~~~~~g~p~e~Al~~~a~~~ 575 (962)
+.+.. . .. .+.........+.+.+++.++++||++.+..++. ....+..|||+|.||+.+|+..
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~ 484 (1057)
T TIGR01652 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDV 484 (1057)
T ss_pred cccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHC
Confidence 00000 0 00 0000001112245678888999999987764111 1134557999999999999998
Q ss_pred CCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccC
Q psy886 576 NPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 655 (962)
Q Consensus 576 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~ 655 (962)
|+....+..-.. .......+....|+++.++||+|+|||||++++.+++ ++++|+|||||.|+++|+..
T Consensus 485 g~~~~~~~~~~~--~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~------~~~l~~KGA~e~il~~~~~~--- 553 (1057)
T TIGR01652 485 GFVFFERTPKSI--SLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG------RIKLLCKGADTVIFKRLSSG--- 553 (1057)
T ss_pred CCEEEEecCCce--EEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC------eEEEEEeCcHHHHHHHhhcc---
Confidence 875443221000 0000001123568999999999999999999986532 57899999999999999741
Q ss_pred CeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccccc----------cc-----ccccccccCCeEEEEE
Q psy886 656 SQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL----------AD-----STKFASYEVNLTFVGV 720 (962)
Q Consensus 656 ~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~----------~~-----~~~~~~~e~~l~~lGl 720 (962)
+++.++++.+..++++ .+|+|||++|||.++.++..... .+ ....+.+|+||+|+|+
T Consensus 554 ------~~~~~~~~~~~~~~~a--~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~ 625 (1057)
T TIGR01652 554 ------GNQVNEETKEHLENYA--SEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGA 625 (1057)
T ss_pred ------chhHHHHHHHHHHHHH--HcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEE
Confidence 2345677888888886 89999999999998653211000 00 1113457899999999
Q ss_pred ecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc------------------------------
Q psy886 721 VGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE------------------------------ 770 (962)
Q Consensus 721 ~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~------------------------------ 770 (962)
++++||||+||+++|+.||+|||||||+||||++||++||++|||++.+.
T Consensus 626 ~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~ 705 (1057)
T TIGR01652 626 TAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEE 705 (1057)
T ss_pred EEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999986532
Q ss_pred ------------cccCCCC------------------------------------------------------------C
Q psy886 771 ------------DTTGKSY------------------------------------------------------------S 778 (962)
Q Consensus 771 ------------~~~g~~l------------------------------------------------------------~ 778 (962)
.++|+++ +
T Consensus 706 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk 785 (1057)
T TIGR01652 706 FNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQ 785 (1057)
T ss_pred hhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHh
Confidence 1233321 3
Q ss_pred cCcEEEeccChhH--HHHhhcccccccCChhHHHHHH-HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCC---cc
Q psy886 779 KAEIGIAMGSGTA--VAKSASEMVLADDNFSSIVAAV-EEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLP---EA 852 (962)
Q Consensus 779 ~AdVGIAmg~gtd--vAkeaADivL~dd~f~~iv~ai-~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~---~p 852 (962)
+|||||++ +|+| .|++|||++|.+ |+.|.+++ .+||.+|+|+++++.|.++.|+..+++.+++.++... .|
T Consensus 786 ~AdVGIgi-~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~ 862 (1057)
T TIGR01652 786 EADVGVGI-SGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTL 862 (1057)
T ss_pred hcCeeeEe-cChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 89999965 4555 688999999975 99999998 7799999999999999999999999999988876432 35
Q ss_pred chhHH-H----hhCccccccccc--CCCCcCccchh
Q psy886 853 LIKKI-S----TTNRGKKKKLSY--NFLDISLLGPA 881 (962)
Q Consensus 853 l~~~q-L----~~d~~~a~al~~--e~~~~~~m~~p 881 (962)
+.+.| + +++.+|++++|. +++++++|.++
T Consensus 863 ~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~ 898 (1057)
T TIGR01652 863 YEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRY 898 (1057)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhC
Confidence 67766 2 999999999986 56667777554
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-85 Score=768.70 Aligned_cols=527 Identities=22% Similarity=0.289 Sum_probs=408.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEE-EEEC
Q psy886 66 ASTNFAVLFCLCPQVLALFEEHEDFN--STLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPE-MGK-VIRG 141 (962)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~-v~r~ 141 (962)
....+++++++++++++.|....... ..+..+...+++++.++++.+.+.++|+|+++++++|+++.|+ +++ |.||
T Consensus 33 p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rd 112 (673)
T PRK14010 33 PIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQD 112 (673)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeC
Confidence 35566667777777666553210000 1112333444555556667777777799999999999999986 786 6789
Q ss_pred CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCc
Q psy886 142 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRN 221 (962)
Q Consensus 142 ~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~ 221 (962)
|+ +++||+++|+|||+|.|++||+||+||+|++|.+. ||||+|||||.||.|++|.
T Consensus 113 g~--~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~~---VDESaLTGES~PV~K~~g~------------------- 168 (673)
T PRK14010 113 GS--YEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLAT---VDESAITGESAPVIKESGG------------------- 168 (673)
T ss_pred CE--EEEEEHHHcCCCCEEEECCCCcccCCeEEEEcceE---EecchhcCCCCceeccCCC-------------------
Confidence 88 79999999999999999999999999999987544 7777777777777775430
Q ss_pred cccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEec
Q psy886 222 EHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQS 301 (962)
Q Consensus 222 ~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS 301 (962)
T Consensus 169 -------------------------------------------------------------------------------- 168 (673)
T PRK14010 169 -------------------------------------------------------------------------------- 168 (673)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHH
Q psy886 302 ILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGE 381 (962)
Q Consensus 302 ~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~ 381 (962)
|+++ +|+||.+.+|+++++|+++|.+|++|||.+++++++.++||+|..+..+..
T Consensus 169 ------------------------d~~~-V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~ 223 (673)
T PRK14010 169 ------------------------DFDN-VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLM 223 (673)
T ss_pred ------------------------ccCe-eecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHH
Confidence 1124 999999999999999999999999999999999999999999988877655
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchh
Q psy886 382 QLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 461 (962)
Q Consensus 382 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~ 461 (962)
.+..+.++++ ++...+..+ .++ ...+...+++++++|||+||..++++++.|++||+|+|+++|++++
T Consensus 224 ~l~ii~l~~~--~~~~~~~~~------~~~----~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~a 291 (673)
T PRK14010 224 TLTIIFLVVI--LTMYPLAKF------LNF----NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRS 291 (673)
T ss_pred HHhHHHHHHH--HHHHHHHhh------ccH----HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHH
Confidence 4443222222 221111111 011 1245677888889999999999999999999999999999999999
Q ss_pred hhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHh
Q psy886 462 VETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICI 541 (962)
Q Consensus 462 ~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 541 (962)
+|+||++|+||||||||||+|++.+.++...++ ....+++..+.
T Consensus 292 vE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------------------------------~~~~~ll~~a~ 335 (673)
T PRK14010 292 VETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------------------------------SSFERLVKAAY 335 (673)
T ss_pred HHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC------------------------------------ccHHHHHHHHH
Confidence 999999999999999999998777666532110 01123445566
Q ss_pred hccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEE
Q psy886 542 MCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYC 621 (962)
Q Consensus 542 lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~ 621 (962)
+|+.. ..+|++.|++.++++.+.... ..+...+||++++|+|++.+
T Consensus 336 ~~~~~-------------s~~P~~~AIv~~a~~~~~~~~---------------------~~~~~~~pF~~~~k~~gv~~ 381 (673)
T PRK14010 336 ESSIA-------------DDTPEGRSIVKLAYKQHIDLP---------------------QEVGEYIPFTAETRMSGVKF 381 (673)
T ss_pred HhcCC-------------CCChHHHHHHHHHHHcCCCch---------------------hhhcceeccccccceeEEEE
Confidence 77642 137999999999987654110 01122479999999999864
Q ss_pred ecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccc
Q psy886 622 TPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMN 701 (962)
Q Consensus 622 ~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~ 701 (962)
+ + ..+.|||||.++++|+.. +...+. .+.+..++++ ++|+|+++++
T Consensus 382 ~----------g-~~i~kGa~~~il~~~~~~---g~~~~~------~~~~~~~~~a--~~G~~~l~v~------------ 427 (673)
T PRK14010 382 T----------T-REVYKGAPNSMVKRVKEA---GGHIPV------DLDALVKGVS--KKGGTPLVVL------------ 427 (673)
T ss_pred C----------C-EEEEECCHHHHHHHhhhc---CCCCch------HHHHHHHHHH--hCCCeEEEEE------------
Confidence 3 1 245699999999999752 221111 1334445554 7899998764
Q ss_pred cccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------
Q psy886 702 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT-------------- 767 (962)
Q Consensus 702 ~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~-------------- 767 (962)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 428 -----------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A~~~PedK~~iV 496 (673)
T PRK14010 428 -----------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVAECKPEDKINVI 496 (673)
T ss_pred -----------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEcCCCHHHHHHHH
Confidence 2578999999999999999999999999999999999999999999999999942
Q ss_pred -------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 768 -------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 768 -------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.++.++|++||||||||+|||+|||||||||+||||++|+++|++||++|+|++|++.|+++.|
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~ 576 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIAND 576 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeecc
Confidence 2344566788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC
Q psy886 835 IGEVVSIFLTAALG 848 (962)
Q Consensus 835 i~~~~~~~~~~~~~ 848 (962)
+++++.++.+.|..
T Consensus 577 ~~~~~~i~~a~~~~ 590 (673)
T PRK14010 577 IAKYFAILPAMFMA 590 (673)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877764
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-81 Score=736.88 Aligned_cols=531 Identities=21% Similarity=0.277 Sum_probs=419.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEEEEECC
Q psy886 65 IASTNFAVLFCLCPQVLALFEEHED-FNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPE-MGKVIRGD 142 (962)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~v~r~~ 142 (962)
.....++++.++++++++.+..... ...+...|..++++++.++++.+++.++|+|+++++++|+++.|+ +++|+|+|
T Consensus 33 ~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g 112 (679)
T PRK01122 33 NPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREP 112 (679)
T ss_pred ChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 3356667777777777665432110 011234577778888889999999999999999999999999886 79999988
Q ss_pred CccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCcc
Q psy886 143 KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNE 222 (962)
Q Consensus 143 ~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~ 222 (962)
+. +++||+++|++||+|.|++||+||+||+|++|.+ .||||+|||||.||.|++|+
T Consensus 113 ~~-~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a---~VDESaLTGES~PV~K~~G~-------------------- 168 (679)
T PRK01122 113 GA-AEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA---SVDESAITGESAPVIRESGG-------------------- 168 (679)
T ss_pred CE-EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE---EEEcccccCCCCceEeCCCC--------------------
Confidence 63 6889999999999999999999999999998754 48888888888887775442
Q ss_pred ccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecC
Q psy886 223 HKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSI 302 (962)
Q Consensus 223 ~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~ 302 (962)
T Consensus 169 -------------------------------------------------------------------------------- 168 (679)
T PRK01122 169 -------------------------------------------------------------------------------- 168 (679)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHH
Q psy886 303 LTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQ 382 (962)
Q Consensus 303 LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~ 382 (962)
++.| +|+||.+.+|+++++|+++|.+|++|||.+++++++.++||+|..++.+...
T Consensus 169 -----------------------~~~~-V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~ 224 (679)
T PRK01122 169 -----------------------DFSS-VTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAG 224 (679)
T ss_pred -----------------------ccCe-EEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHh
Confidence 0114 9999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhh
Q psy886 383 LSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSV 462 (962)
Q Consensus 383 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~ 462 (962)
+..+.+++++.++.+.+ +. +.. ..+..++++++++|||+|+...+++...++.||+|+|+++|+++++
T Consensus 225 l~~i~l~~~~~~~~~~~--~~----g~~------~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~av 292 (679)
T PRK01122 225 LTIIFLLVVATLPPFAA--YS----GGA------LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAV 292 (679)
T ss_pred hhHHHHHHHHHHHHHHH--Hh----Cch------HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHH
Confidence 76555444444333221 11 111 1467789999999999999999999999999999999999999999
Q ss_pred hhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhh
Q psy886 463 ETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIM 542 (962)
Q Consensus 463 E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l 542 (962)
|+||++|+||||||||||+|+|++++++..++. +. .+++..+++
T Consensus 293 E~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------------------------~~---~~ll~~a~~ 336 (679)
T PRK01122 293 EAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV---------------------------------TE---EELADAAQL 336 (679)
T ss_pred HHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC---------------------------------CH---HHHHHHHHH
Confidence 999999999999999999999999987643210 11 233445556
Q ss_pred ccCCccccccccCceEEecChhHHHHHHHHHH-cCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEE
Q psy886 543 CNDSAIDFNEFKQAFEKVGEATETALIVLAEK-LNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYC 621 (962)
Q Consensus 543 cn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~ 621 (962)
|+... .+|...|+++++++ .+... .+..++....+||++.+|+|++.+
T Consensus 337 ~s~~s-------------~hP~~~AIv~~a~~~~~~~~------------------~~~~~~~~~~~pF~s~~~~~gv~~ 385 (679)
T PRK01122 337 SSLAD-------------ETPEGRSIVVLAKQRFNLRE------------------RDLQSLHATFVPFSAQTRMSGVDL 385 (679)
T ss_pred hcCCC-------------CCchHHHHHHHHHhhcCCCc------------------hhhccccceeEeecCcCceEEEEE
Confidence 65331 24677899998876 23210 011245567889999998888754
Q ss_pred ecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccc
Q psy886 622 TPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMN 701 (962)
Q Consensus 622 ~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~ 701 (962)
. + ..|.|||+|.+++.|... +... .+++.+..++++ ++|+|++++|+
T Consensus 386 ~----------g-~~~~kGa~e~il~~~~~~---g~~~------~~~~~~~~~~~a--~~G~~~l~va~----------- 432 (679)
T PRK01122 386 D----------G-REIRKGAVDAIRRYVESN---GGHF------PAELDAAVDEVA--RKGGTPLVVAE----------- 432 (679)
T ss_pred C----------C-EEEEECCHHHHHHHHHhc---CCcC------hHHHHHHHHHHH--hCCCcEEEEEE-----------
Confidence 2 2 478999999999999642 1111 234555566664 88999999983
Q ss_pred cccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------
Q psy886 702 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT-------------- 767 (962)
Q Consensus 702 ~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~-------------- 767 (962)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A~~~PedK~~iV 500 (679)
T PRK01122 433 ------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLAEATPEDKLALI 500 (679)
T ss_pred ------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEccCCHHHHHHHH
Confidence 568999999999999999999999999999999999999999999999999942
Q ss_pred -------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 768 -------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 768 -------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.++.++|++||||||||+|||+|||||||||+||||++|++++++||++.-.--....|+++..
T Consensus 501 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~ 580 (679)
T PRK01122 501 RQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIAND 580 (679)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHH
Confidence 2445666788999999999999999999999999999999999999999999977777788998877
Q ss_pred HHHHHHHHHHHHh
Q psy886 835 IGEVVSIFLTAAL 847 (962)
Q Consensus 835 i~~~~~~~~~~~~ 847 (962)
++--+.++-+.|.
T Consensus 581 ~~~~~~i~p~~~~ 593 (679)
T PRK01122 581 VAKYFAIIPAMFA 593 (679)
T ss_pred HHHHHHHHHHHHH
Confidence 6655555544443
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-80 Score=767.64 Aligned_cols=716 Identities=19% Similarity=0.198 Sum_probs=510.9
Q ss_pred hccCccccCCC------ChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy886 49 FIPARVTSLSP------SENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAE 122 (962)
Q Consensus 49 ~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 122 (962)
|..|.+...+. +..+++++..+..++.++..++.......... ....+...++++++..+...++.++++|++
T Consensus 87 f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d 165 (1178)
T PLN03190 87 FAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-RGASILPLAFVLLVTAVKDAYEDWRRHRSD 165 (1178)
T ss_pred CCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 55566654443 35556667888888888888887765444332 344566677777888888999999998888
Q ss_pred HHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeec--ceeeeecccccCCCcceeecC
Q psy886 123 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTGESVSVIKHT 200 (962)
Q Consensus 123 ~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~--~~~~vdes~lTGEs~Pv~k~~ 200 (962)
+.+ .+..++|+|+|+ ++++++++|+|||+|.|++||+|||||+|++.+. +.++||||+|||||.|+.|.+
T Consensus 166 ~~~------N~~~~~v~~~~~--~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 166 RIE------NNRLAWVLVDDQ--FQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred Hhh------cCcEEEEEECCe--EEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 765 367899999998 8999999999999999999999999999997333 568899999999999999987
Q ss_pred CCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCC
Q psy886 201 DAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGD 280 (962)
Q Consensus 201 g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd 280 (962)
++.+.... ....++ ...+. .+-|-. +
T Consensus 238 ~~~~~~~~-------------------------------~~~~~~---~~~i~-------~e~Pn~-------------~ 263 (1178)
T PLN03190 238 KQETLSKI-------------------------------PEKEKI---NGLIK-------CEKPNR-------------N 263 (1178)
T ss_pred cchhhhcc-------------------------------hhhhhc---eEEEE-------EeCCCc-------------c
Confidence 65321100 000000 00000 000000 0
Q ss_pred eecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeec-eEEEEEEEeccchhhHHHH
Q psy886 281 KIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG-KARGIVMGTGLNTAIGKIR 359 (962)
Q Consensus 281 ~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G-~~~~vV~~tG~~T~~gki~ 359 (962)
..--+| .+.++ |+.. +.+.+|++++||.+.+. +++|+|+|||++| |++
T Consensus 264 l~~F~G--------~i~~~-----~~~~---------------~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~ 312 (1178)
T PLN03190 264 IYGFQA--------NMEVD-----GKRL---------------SLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAM 312 (1178)
T ss_pred ceeEEE--------EEEEC-----CCcc---------------cCCccceeeccceecCCceEEEEEEEechhh---hHh
Confidence 011122 22221 2222 23446999999999776 7999999999999 788
Q ss_pred hhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC----------------------CcchHHHHH
Q psy886 360 TEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG----------------------GSWIKGAVY 417 (962)
Q Consensus 360 ~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~~ 417 (962)
.+...++.+.|++++++|++..+++.+.+++|+++.++...+....... ..|....+.
T Consensus 313 ~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 313 LNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred hcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHH
Confidence 8877778899999999999999998888888877765542221100000 001011133
Q ss_pred HHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhc----------CccCCchhhhhcCCeeEEEecCCCcccCCceEEE
Q psy886 418 YFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKN----------AIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVS 487 (962)
Q Consensus 418 ~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~----------ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~ 487 (962)
.|..++.++...||++|++++++++..++.+|.+++ +.||+.+.+|+||+|++||+|||||||+|+|+++
T Consensus 393 ~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk 472 (1178)
T PLN03190 393 TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472 (1178)
T ss_pred HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEE
Confidence 456667788899999999999999988899998877 7799999999999999999999999999999999
Q ss_pred EEEEeccccCCCCCcc-----eE--EEeCCccccCcceecC-----CC--ccCCCChHHHHHHHHHHhhccCCccccc-c
Q psy886 488 RMFIFDKIEGSDSSFL-----EF--EITGSTYEPIGDVFLN-----GS--KIKGADYETLHELGTICIMCNDSAIDFN-E 552 (962)
Q Consensus 488 ~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~l~~~~~~~~lcn~~~~~~~-~ 552 (962)
+|++++..|+...... .+ ...+..+.|......+ .. .......+.+.+++.++++||++.+... +
T Consensus 473 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCC
Confidence 9999887765321100 00 0111111111111000 00 0001112356788999999999876321 1
Q ss_pred c-c----CceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCC
Q psy886 553 F-K----QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSS 627 (962)
Q Consensus 553 ~-~----~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~ 627 (962)
. . ...+..++|+|.||+.+|++.|+....+..-.. .....+.+..|+++.++||+|+||||||+++.++
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i----~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~-- 626 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHI----VIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPD-- 626 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeE----EEeeccceecceeEEEecccccccEEEEEEEcCC--
Confidence 0 1 122445699999999999999985554332110 0011234567999999999999999999998643
Q ss_pred CCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccccc-----
Q psy886 628 KLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL----- 702 (962)
Q Consensus 628 ~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~----- 702 (962)
+.+++|+|||||.|+++|+... +++.++++.+.+++|+ ++|+|||++|||+++.++.+...
T Consensus 627 ----~~~~l~~KGA~e~il~~~~~~~--------~~~~~~~~~~~l~~~a--~~GlRtL~lA~k~l~~~e~~~~~~~~~~ 692 (1178)
T PLN03190 627 ----KTVKVFVKGADTSMFSVIDRSL--------NMNVIRATEAHLHTYS--SLGLRTLVVGMRELNDSEFEQWHFSFEA 692 (1178)
T ss_pred ----CcEEEEEecCcHHHHHhhcccc--------cchhHHHHHHHHHHHH--hcCCceEEEEEEeCCHHHHhhHHHHHHH
Confidence 1578999999999999997542 2235667788888886 89999999999998653211100
Q ss_pred ----------ccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc-
Q psy886 703 ----------ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED- 771 (962)
Q Consensus 703 ----------~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~- 771 (962)
......+.+|+||+|+|+++++||||++++++|+.|++|||+|||+|||+++||++||++|||++++..
T Consensus 693 a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~ 772 (1178)
T PLN03190 693 ASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772 (1178)
T ss_pred hhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCee
Confidence 001123467999999999999999999999999999999999999999999999999999999865310
Q ss_pred -------------------------------------------------ccCCCC-------------------------
Q psy886 772 -------------------------------------------------TTGKSY------------------------- 777 (962)
Q Consensus 772 -------------------------------------------------~~g~~l------------------------- 777 (962)
++|.++
T Consensus 773 i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~c 852 (1178)
T PLN03190 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCC 852 (1178)
T ss_pred EEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEe
Confidence 112111
Q ss_pred -----------------------------------CcCcEEEeccChhH--HHHhhcccccccCChhHHHHHHH-HhHHH
Q psy886 778 -----------------------------------SKAEIGIAMGSGTA--VAKSASEMVLADDNFSSIVAAVE-EGRAI 819 (962)
Q Consensus 778 -----------------------------------~~AdVGIAmg~gtd--vAkeaADivL~dd~f~~iv~ai~-~gR~i 819 (962)
++|||||++ +|+| .|..|||+.+ ..|.-+.+++- +||..
T Consensus 853 R~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI-sG~EG~qA~~aSDfaI--~~Fr~L~rLLlvHGr~~ 929 (1178)
T PLN03190 853 RVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMASDFAM--GQFRFLVPLLLVHGHWN 929 (1178)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee-cCchhHHHHHhhccch--hhhHHHHHHHHHhCHHH
Confidence 289999943 6666 7888999999 67999999988 69999
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH--------HhhCccccccccc---CCCCcCccchh
Q psy886 820 YNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI--------STTNRGKKKKLSY---NFLDISLLGPA 881 (962)
Q Consensus 820 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q--------L~~d~~~a~al~~---e~~~~~~m~~p 881 (962)
|+++.+.+.|.+..|+..+++.+++.++-..++.+-.. ++.-.+|.+++|. +-|+..+++.|
T Consensus 930 y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P 1002 (1178)
T PLN03190 930 YQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYP 1002 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCc
Confidence 99999999999999999999999988875544443332 1667788888854 44556667777
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-77 Score=701.71 Aligned_cols=530 Identities=21% Similarity=0.287 Sum_probs=412.0
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eEEEEE-C
Q psy886 67 STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVE---PFVILLILIANAIVGVWQERNAESAIEALKEYEPE-MGKVIR-G 141 (962)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~~v~r-~ 141 (962)
...++++.++++++++.+............|++ .+++++.++++.+++.++|+|+++++++|+++.|+ .++|+| |
T Consensus 34 ~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d 113 (675)
T TIGR01497 34 VMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD 113 (675)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC
Confidence 455666666777666543210000000011333 46667778899999999999999999999998877 588986 7
Q ss_pred CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCc
Q psy886 142 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRN 221 (962)
Q Consensus 142 ~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~ 221 (962)
|+ +++||+++|++||+|.|++||+||+||+|++|.+. ||||+|||||.||.|++|+
T Consensus 114 g~--~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~~---VDESaLTGES~PV~K~~g~------------------- 169 (675)
T TIGR01497 114 GA--IDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVAS---VDESAITGESAPVIKESGG------------------- 169 (675)
T ss_pred CE--EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccEE---EEcccccCCCCceeecCCC-------------------
Confidence 76 79999999999999999999999999999987444 8888888888888876442
Q ss_pred cccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEec
Q psy886 222 EHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQS 301 (962)
Q Consensus 222 ~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS 301 (962)
.
T Consensus 170 -----------------------------------------------------------------------~-------- 170 (675)
T TIGR01497 170 -----------------------------------------------------------------------D-------- 170 (675)
T ss_pred -----------------------------------------------------------------------C--------
Confidence 0
Q ss_pred CCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHH
Q psy886 302 ILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGE 381 (962)
Q Consensus 302 ~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~ 381 (962)
.+.+|+||.+.+|+++++|+++|.+|++|||.+++++++.++||+|..++.+..
T Consensus 171 --------------------------~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~ 224 (675)
T TIGR01497 171 --------------------------FASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLI 224 (675)
T ss_pred --------------------------cceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHH
Confidence 013899999999999999999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchh
Q psy886 382 QLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 461 (962)
Q Consensus 382 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~ 461 (962)
.+..+.+++++.++.+. .+ .+.. ..+..++++++++|||+|+...+.....++.||+|+|+++|++.+
T Consensus 225 ~l~~v~li~~~~~~~~~--~~----~~~~------~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~a 292 (675)
T TIGR01497 225 ALTLVFLLVTATLWPFA--AY----GGNA------ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRA 292 (675)
T ss_pred HHHHHHHHHHHHHHHHH--Hh----cChh------HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHH
Confidence 66554444433333221 11 1111 135667899999999988777777777899999999999999999
Q ss_pred hhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHh
Q psy886 462 VETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICI 541 (962)
Q Consensus 462 ~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 541 (962)
+|+||++|+||||||||||+|+|++.+++..++. + ..+++..++
T Consensus 293 vE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------------------------~---~~~ll~~aa 336 (675)
T TIGR01497 293 VEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------------------------------D---EKTLADAAQ 336 (675)
T ss_pred HHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC---------------------------------c---HHHHHHHHH
Confidence 9999999999999999999999999988643210 1 123344455
Q ss_pred hccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEE
Q psy886 542 MCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYC 621 (962)
Q Consensus 542 lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~ 621 (962)
+|+.. ..+|.+.|++.++++.+.... ...++.....||++.+|+|++.+
T Consensus 337 ~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~------------------~~~~~~~~~~pf~~~~~~sg~~~ 385 (675)
T TIGR01497 337 LASLA-------------DDTPEGKSIVILAKQLGIRED------------------DVQSLHATFVEFTAQTRMSGINL 385 (675)
T ss_pred HhcCC-------------CCCcHHHHHHHHHHHcCCCcc------------------ccccccceEEEEcCCCcEEEEEE
Confidence 56532 135888999999987654211 01123456789999988777644
Q ss_pred ecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccc
Q psy886 622 TPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMN 701 (962)
Q Consensus 622 ~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~ 701 (962)
.+ + ..+.|||||.+++.|... +... . .++.+..++++ ++|+|++++|+
T Consensus 386 ~~---------g-~~~~kGa~e~i~~~~~~~---g~~~--~----~~~~~~~~~~a--~~G~r~l~va~----------- 433 (675)
T TIGR01497 386 DN---------G-RMIRKGAVDAIKRHVEAN---GGHI--P----TDLDQAVDQVA--RQGGTPLVVCE----------- 433 (675)
T ss_pred eC---------C-eEEEECCHHHHHHHHHhc---CCCC--c----HHHHHHHHHHH--hCCCeEEEEEE-----------
Confidence 31 2 578999999999988521 1111 1 23445556664 89999999984
Q ss_pred cccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------
Q psy886 702 LADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT-------------- 767 (962)
Q Consensus 702 ~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~-------------- 767 (962)
+.+++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||.+
T Consensus 434 ------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a~~~PedK~~~v 501 (675)
T TIGR01497 434 ------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALI 501 (675)
T ss_pred ------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEcCCCHHHHHHHH
Confidence 347999999999999999999999999999999999999999999999999942
Q ss_pred -------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 768 -------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 768 -------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.++.+.|++||||||||+||++||++||+||+||||++|++++++||+++-+......|+++.+
T Consensus 502 ~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~ 581 (675)
T TIGR01497 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIAND 581 (675)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeeccc
Confidence 1233445567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC
Q psy886 835 IGEVVSIFLTAALG 848 (962)
Q Consensus 835 i~~~~~~~~~~~~~ 848 (962)
++.-+.++-+.|..
T Consensus 582 ~~~~~~~~~~~~~~ 595 (675)
T TIGR01497 582 VAKYFAIIPAIFAA 595 (675)
T ss_pred HHHHHHHHHHHHHh
Confidence 99888777666653
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-76 Score=693.41 Aligned_cols=539 Identities=25% Similarity=0.331 Sum_probs=435.9
Q ss_pred cchhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 34 ITLGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
....|+++++..+..|+...++++..+..++....+|+.++++.....++++.+..+.. .+|.++..+++++.+++++
T Consensus 113 ~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~--~yf~~aa~ii~l~~~G~~L 190 (713)
T COG2217 113 FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP--VYFEEAAMLIFLFLLGRYL 190 (713)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999988888898899999999999999988888765544 6788889999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.+...|+++++++|.++.|+++++++++.. +++||.++|++||+|.|+|||+||+||+|++|++. ||||+|||||
T Consensus 191 E~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~-~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~---vDeS~iTGEs 266 (713)
T COG2217 191 EARAKGRARRAIRALLDLAPKTATVVRGDGE-EEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS---VDESMLTGES 266 (713)
T ss_pred HHHHHHHHHHHHHHHHccCCCEEEEEecCCc-EEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEE---eecchhhCCC
Confidence 9999999999999999999999988885433 79999999999999999999999999999988777 7777777777
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
.||+|.+|
T Consensus 267 ~PV~k~~G------------------------------------------------------------------------ 274 (713)
T COG2217 267 LPVEKKPG------------------------------------------------------------------------ 274 (713)
T ss_pred CCEecCCC------------------------------------------------------------------------
Confidence 77777554
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+.||+||.+.+|..+..|+++|.||
T Consensus 275 -------------------------------------------------------d~V~aGtiN~~G~l~i~vt~~~~dt 299 (713)
T COG2217 275 -------------------------------------------------------DEVFAGTVNLDGSLTIRVTRVGADT 299 (713)
T ss_pred -------------------------------------------------------CEEeeeEEECCccEEEEEEecCccC
Confidence 3489999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCc
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEG 433 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~ 433 (962)
.+++|.+++++++..|+|.|+..|+++.++.+++++++++.|++|+... +.+|. ..+..++++++++|||+
T Consensus 300 ~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-----~~~~~----~a~~~a~avLVIaCPCA 370 (713)
T COG2217 300 TLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG-----GGDWE----TALYRALAVLVIACPCA 370 (713)
T ss_pred HHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-----CCcHH----HHHHHHHhheeeeCccH
Confidence 9999999999999999999999999999999988888888777654221 12332 35788999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccc
Q psy886 434 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYE 513 (962)
Q Consensus 434 Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (962)
|.+++|+++..+..+.+|+|+++|+..++|.++++|+++||||||||+|+|+|.++...++
T Consensus 371 LgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~------------------- 431 (713)
T COG2217 371 LGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------------------- 431 (713)
T ss_pred HHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-------------------
Confidence 9999999999999999999999999999999999999999999999999999999876431
Q ss_pred cCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHh
Q psy886 514 PIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIA 593 (962)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~ 593 (962)
+.+.+..+... + .....+|.-.|+++.++..+.....
T Consensus 432 ---------------~e~~~L~laAa--l--------------E~~S~HPiA~AIv~~a~~~~~~~~~------------ 468 (713)
T COG2217 432 ---------------DEDELLALAAA--L--------------EQHSEHPLAKAIVKAAAERGLPDVE------------ 468 (713)
T ss_pred ---------------CHHHHHHHHHH--H--------------HhcCCChHHHHHHHHHHhcCCCCcc------------
Confidence 11233333322 2 1124679999999988766521110
Q ss_pred hhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHH
Q psy886 594 VRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLT 673 (962)
Q Consensus 594 ~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~ 673 (962)
...++| .+-+...+. + ..+.-|.+.-+.+.-. +.+. .....
T Consensus 469 ----------~~~~i~----G~Gv~~~v~----------g-~~v~vG~~~~~~~~~~---------~~~~-----~~~~~ 509 (713)
T COG2217 469 ----------DFEEIP----GRGVEAEVD----------G-ERVLVGNARLLGEEGI---------DLPL-----LSERI 509 (713)
T ss_pred ----------ceeeec----cCcEEEEEC----------C-EEEEEcCHHHHhhcCC---------Cccc-----hhhhH
Confidence 011111 111111110 1 3445566654433210 0110 11112
Q ss_pred HHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCH
Q psy886 674 RQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNK 753 (962)
Q Consensus 674 ~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~ 753 (962)
+.+. .+|.-++.++ .|..++|+++++|++||+++++|++||+.||+++|+||||+
T Consensus 510 ~~~~--~~G~t~v~va-----------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 510 EALE--SEGKTVVFVA-----------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred HHHH--hcCCeEEEEE-----------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 2221 3444344443 45589999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCCh
Q psy886 754 ATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806 (962)
Q Consensus 754 ~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f 806 (962)
.||.+||+++||.. +|+.++.++|++||||||||+|||+|+|+||++|++||+
T Consensus 565 ~~A~~iA~~lGId~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL 644 (713)
T COG2217 565 RTAEAIAKELGIDEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDL 644 (713)
T ss_pred HHHHHHHHHcChHhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCH
Confidence 99999999999932 245567788999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 807 ~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
..++.+|+.+|++++|||+|+.|.+.||...+.+
T Consensus 645 ~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ipl 678 (713)
T COG2217 645 SAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPL 678 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999765433
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-71 Score=670.61 Aligned_cols=511 Identities=21% Similarity=0.312 Sum_probs=409.6
Q ss_pred cCccccCCCChhHHHHH-HHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy886 51 PARVTSLSPSENVHIAS-TNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALK 129 (962)
Q Consensus 51 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~ 129 (962)
...+++++++..++... .+|..++++..+..++++ .|.++..++++++++++++.++++|+++.+++|+
T Consensus 169 ~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~----------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~ 238 (741)
T PRK11033 169 GLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG----------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALM 238 (741)
T ss_pred HHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888777654 477777777766555432 3678889999999999999999999999999999
Q ss_pred ccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCcccc
Q psy886 130 EYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAE 209 (962)
Q Consensus 130 ~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~ 209 (962)
++.|.+++++|||+ +++||.++|+|||+|+|++||+||+||+|++|++. ||||+|||||.||+|
T Consensus 239 ~l~p~~a~vir~g~--~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~---vdes~lTGEs~Pv~k----------- 302 (741)
T PRK11033 239 ALVPETATRLRDGE--REEVAIADLRPGDVIEVAAGGRLPADGKLLSPFAS---FDESALTGESIPVER----------- 302 (741)
T ss_pred hCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEecceEEEECcEE---eecccccCCCCCEec-----------
Confidence 99999999999998 79999999999999999999999999999976433 555555555555555
Q ss_pred cCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEE
Q psy886 210 KNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 289 (962)
Q Consensus 210 ~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll 289 (962)
T Consensus 303 -------------------------------------------------------------------------------- 302 (741)
T PRK11033 303 -------------------------------------------------------------------------------- 302 (741)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCC
Q psy886 290 KIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIK 369 (962)
Q Consensus 290 ~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~ 369 (962)
.++ +.+|+||.+.+|.+++.|+++|.+|.+|||.+++++++.++
T Consensus 303 -----------------------~~G-------------d~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k 346 (741)
T PRK11033 303 -----------------------ATG-------------EKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERR 346 (741)
T ss_pred -----------------------CCC-------------CeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccC
Confidence 332 46899999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q psy886 370 TPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM 449 (962)
Q Consensus 370 tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m 449 (962)
+|+|+.++++++++.++++++++++|+++...+ +.+|.. .+..++++++++|||+|.++.++++..+..++
T Consensus 347 ~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-----~~~~~~----~i~~a~svlviacPcaL~latP~a~~~~l~~a 417 (741)
T PRK11033 347 APIERFIDRFSRIYTPAIMLVALLVILVPPLLF-----AAPWQE----WIYRGLTLLLIGCPCALVISTPAAITSGLAAA 417 (741)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCHHH----HHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH
Confidence 999999999999999999999988887753222 223422 46678999999999999999999999999999
Q ss_pred hhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCC
Q psy886 450 AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGAD 529 (962)
Q Consensus 450 ~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (962)
+|+|+++|+..++|+|+++++||||||||||+|+|+|.+++..++. +
T Consensus 418 ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------------------------------~ 464 (741)
T PRK11033 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI---------------------------------S 464 (741)
T ss_pred HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC---------------------------------C
Confidence 9999999999999999999999999999999999999998653310 1
Q ss_pred hHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeec
Q psy886 530 YETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLE 609 (962)
Q Consensus 530 ~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 609 (962)
.+.+..+. .++. ....+|.+.|++.++.+.+. .+|
T Consensus 465 ~~~~l~~a--a~~e--------------~~s~hPia~Ai~~~a~~~~~-----------------------------~~~ 499 (741)
T PRK11033 465 ESELLALA--AAVE--------------QGSTHPLAQAIVREAQVRGL-----------------------------AIP 499 (741)
T ss_pred HHHHHHHH--HHHh--------------cCCCCHHHHHHHHHHHhcCC-----------------------------CCC
Confidence 12222221 1111 12368999999998876442 246
Q ss_pred CCCCCceEEEE-EecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeE
Q psy886 610 FSRDRKSMSSY-CTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGL 688 (962)
Q Consensus 610 F~s~rk~msvv-~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~ 688 (962)
|.++++.+.-. ++..- + + ..+.-|+++.+.+ ++++. ....+.+. .+|.|++++
T Consensus 500 ~~~~~~~~~g~Gv~~~~----~--g-~~~~ig~~~~~~~-------------~~~~~----~~~~~~~~--~~g~~~v~v 553 (741)
T PRK11033 500 EAESQRALAGSGIEGQV----N--G-ERVLICAPGKLPP-------------LADAF----AGQINELE--SAGKTVVLV 553 (741)
T ss_pred CCcceEEEeeEEEEEEE----C--C-EEEEEecchhhhh-------------ccHHH----HHHHHHHH--hCCCEEEEE
Confidence 77777766421 21110 0 1 1234577776532 12222 22334443 789999988
Q ss_pred EeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q psy886 689 ATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE 768 (962)
Q Consensus 689 A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~ 768 (962)
|+ |.+++|+++++|++|+|++++|++||++|++++|+|||++.+|.++|+++||...
T Consensus 554 a~-----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~ 610 (741)
T PRK11033 554 LR-----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFR 610 (741)
T ss_pred EE-----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCee
Confidence 84 4579999999999999999999999999999999999999999999999999421
Q ss_pred -------------------------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHH
Q psy886 769 -------------------------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNM 823 (962)
Q Consensus 769 -------------------------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni 823 (962)
|+.++.+++++||||||||+|+|+++++||++|++|++..|++++++||++++||
T Consensus 611 ~~~~p~~K~~~v~~l~~~~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I 690 (741)
T PRK11033 611 AGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANI 690 (741)
T ss_pred cCCCHHHHHHHHHHHhcCCCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 1123334567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHH
Q psy886 824 KQFIRYLISSNIGEVV 839 (962)
Q Consensus 824 ~k~i~~~l~~ni~~~~ 839 (962)
|+|+.|.+.||+..+.
T Consensus 691 ~~nl~~a~~~n~~~i~ 706 (741)
T PRK11033 691 RQNITIALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999975443
|
|
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-71 Score=630.02 Aligned_cols=572 Identities=20% Similarity=0.246 Sum_probs=440.4
Q ss_pred hhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccc-----cccccchhHHHHHHHHHHHH
Q psy886 36 LGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDF-----NSTLTSFVEPFVILLILIAN 110 (962)
Q Consensus 36 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~ 110 (962)
..++++++..+.+|+.+++++..+++.+++...+|+.++++...+.+.|+..... ..+.++|..+..++.++.++
T Consensus 275 ~~~l~~~L~~~vqf~~G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lg 354 (951)
T KOG0207|consen 275 GNSLSFVLATPVQFVGGRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLG 354 (951)
T ss_pred hhHHHhhhheeeEEecceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHH
Confidence 4578889999999999999999999999999888888877777776666543211 11445677777788889999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeeccccc
Q psy886 111 AIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 190 (962)
Q Consensus 111 ~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lT 190 (962)
++++...++|+..++.+|+++.|..+.++.+|+. +++||.+.|++||+|.|.||++||+||+|++|++. ||||++|
T Consensus 355 r~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~-e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~---VDEs~iT 430 (951)
T KOG0207|consen 355 RWLESLAKGKTSEALSKLMSLAPSKATIIEDGSE-EKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSE---VDESLIT 430 (951)
T ss_pred HHHHHHhhccchHHHHHHhhcCcccceEeecCCc-ceEeeeeeeccCCEEEECCCCccccccEEEeCcee---echhhcc
Confidence 9999999999999999999999999999999975 79999999999999999999999999999987776 6766666
Q ss_pred CCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCC
Q psy886 191 GESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 270 (962)
Q Consensus 191 GEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~ 270 (962)
||++||.|++|
T Consensus 431 GEs~PV~Kk~g--------------------------------------------------------------------- 441 (951)
T KOG0207|consen 431 GESMPVPKKKG--------------------------------------------------------------------- 441 (951)
T ss_pred CCceecccCCC---------------------------------------------------------------------
Confidence 66666666544
Q ss_pred CCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEec
Q psy886 271 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTG 350 (962)
Q Consensus 271 GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG 350 (962)
..|.+||...+|+....++.+|
T Consensus 442 ----------------------------------------------------------s~ViaGsiN~nG~l~VkaT~~g 463 (951)
T KOG0207|consen 442 ----------------------------------------------------------STVIAGSINLNGTLLVKATKVG 463 (951)
T ss_pred ----------------------------------------------------------CeeeeeeecCCceEEEEEEecc
Confidence 4588999999999999999999
Q ss_pred cchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-CCCCCCcchHHHHHHHHHHHHHHHhh
Q psy886 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFN-DPAHGGSWIKGAVYYFKIAVALAVAA 429 (962)
Q Consensus 351 ~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~i~l~v~~ 429 (962)
.||.+++|.+++++++..++|+|+..|+++.++.++++++++..|++|+.... .......|...+...|..++++++++
T Consensus 464 ~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviA 543 (951)
T KOG0207|consen 464 GDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIA 543 (951)
T ss_pred ccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEE
Confidence 99999999999999999999999999999999999999999988888753322 11122334456677899999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeC
Q psy886 430 IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITG 509 (962)
Q Consensus 430 iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 509 (962)
|||+|.++.+++...+....+++|+|+|..+.+|.+.+++++.||||||||+|+++|.++....+.
T Consensus 544 CPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~-------------- 609 (951)
T KOG0207|consen 544 CPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP-------------- 609 (951)
T ss_pred CchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc--------------
Confidence 999999999999999999999999999999999999999999999999999999999998765421
Q ss_pred CccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhh
Q psy886 510 STYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRRE 589 (962)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 589 (962)
....+...+. .+. .....+|.-.|++.+|++.+.....
T Consensus 610 ------------------~~~~e~l~~v--~a~--------------Es~SeHPig~AIv~yak~~~~~~~~-------- 647 (951)
T KOG0207|consen 610 ------------------ISLKEALALV--AAM--------------ESGSEHPIGKAIVDYAKEKLVEPNP-------- 647 (951)
T ss_pred ------------------ccHHHHHHHH--HHH--------------hcCCcCchHHHHHHHHHhcccccCc--------
Confidence 0111222221 111 1124579999999999876521000
Q ss_pred HHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHH
Q psy886 590 QAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRI 669 (962)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i 669 (962)
.+. +..-.|.-+.+...+.+. +.. .+-|.-+-+.+.- - +..+ .+
T Consensus 648 -----------~~~-~~~~~~pg~g~~~~~~~~----------~~~-i~iGN~~~~~r~~-------~--~~~~----~i 691 (951)
T KOG0207|consen 648 -----------EGV-LSFEYFPGEGIYVTVTVD----------GNE-VLIGNKEWMSRNG-------C--SIPD----DI 691 (951)
T ss_pred -----------ccc-ceeecccCCCcccceEEe----------eeE-EeechHHHHHhcC-------C--CCch----hH
Confidence 000 000011111111111111 111 2334433332211 0 1111 12
Q ss_pred HHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEc
Q psy886 670 LDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVIT 749 (962)
Q Consensus 670 ~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiT 749 (962)
+...++.. ..|.-+..++ .|.++.|+++++|++|+|+..+|+.||+.||+|+|+|
T Consensus 692 ~~~~~~~e--~~g~tvv~v~-----------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT 746 (951)
T KOG0207|consen 692 LDALTESE--RKGQTVVYVA-----------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT 746 (951)
T ss_pred HHhhhhHh--hcCceEEEEE-----------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc
Confidence 33333221 4455555444 4678999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccc
Q psy886 750 GDNKATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLA 802 (962)
Q Consensus 750 GD~~~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~ 802 (962)
|||..||.++|+++||-. +|+.++.++|.+||||||||.|||+|.|+|||||+
T Consensus 747 GDn~~aA~svA~~VGi~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLm 826 (951)
T KOG0207|consen 747 GDNDAAARSVAQQVGIDNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLM 826 (951)
T ss_pred CCCHHHHHHHHHhhCcceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEE
Confidence 999999999999999631 24456777889999999999999999999999999
Q ss_pred cCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhH
Q psy886 803 DDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKK 856 (962)
Q Consensus 803 dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 856 (962)
.||+..++.+|+.+|+++.+||.|+.|++.||+..+ ++..+.|++++.-|.|.
T Consensus 827 rn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I-pIAagvF~P~~~~L~Pw 879 (951)
T KOG0207|consen 827 RNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI-PIAAGVFAPFGIVLPPW 879 (951)
T ss_pred ccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hhheecccCCccccCch
Confidence 999999999999999999999999999999997643 34444444444224443
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-68 Score=655.04 Aligned_cols=533 Identities=20% Similarity=0.253 Sum_probs=418.5
Q ss_pred HHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhcccccc-----c-c-ccchhHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFN-----S-T-LTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~-~~~~~~~~~i~~~~~~~~~~ 113 (962)
+++..++.++.++++++.++..++....+|++++++.+...+.++.+.... . . ..+|..+..+++++.+++++
T Consensus 223 ~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~l 302 (834)
T PRK10671 223 GLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHML 302 (834)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHH
Confidence 455677888888899999999998888889999988888877766432110 0 0 12455578888899999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.+.+.|+++.+++|.++.|++++++|+|+ +++||.++|+|||+|.|++||+||+||+|++|++. ||||+|||||
T Consensus 303 e~~~~~~~~~~~~~L~~l~p~~a~~~~~~~--~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~---vdeS~lTGEs 377 (834)
T PRK10671 303 EARARQRSSKALEKLLDLTPPTARVVTDEG--EKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAW---LDEAMLTGEP 377 (834)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEEeCCc--EEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEE---EeehhhcCCC
Confidence 999999999999999999999999999998 79999999999999999999999999999976443 6666666666
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
.|+.|++|
T Consensus 378 ~pv~k~~g------------------------------------------------------------------------ 385 (834)
T PRK10671 378 IPQQKGEG------------------------------------------------------------------------ 385 (834)
T ss_pred CCEecCCC------------------------------------------------------------------------
Confidence 66555433
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+.+|+||.+.+|.+++.|+++|.+|
T Consensus 386 -------------------------------------------------------d~V~aGt~~~~G~~~~~v~~~g~~t 410 (834)
T PRK10671 386 -------------------------------------------------------DSVHAGTVVQDGSVLFRASAVGSHT 410 (834)
T ss_pred -------------------------------------------------------CEEEecceecceeEEEEEEEEcCcC
Confidence 4589999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCc
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEG 433 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~ 433 (962)
.+|||.+++++++..++|+|+..++++.++.+++++++++.+++|+.. + .+ ..+.+.+..++++++++|||+
T Consensus 411 ~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~------~-~~-~~~~~~~~~a~~vlv~acPca 482 (834)
T PRK10671 411 TLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF------G-PA-PQIVYTLVIATTVLIIACPCA 482 (834)
T ss_pred hHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------C-Cc-hHHHHHHHHHHHHHHHhcccc
Confidence 999999999999889999999999999999998888888777665321 1 11 012345778999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccc
Q psy886 434 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYE 513 (962)
Q Consensus 434 Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (962)
|++++++++..++.+++|+|+++|+.+++|+||+++++|||||||||+|+|+|.++...+..
T Consensus 483 L~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~------------------ 544 (834)
T PRK10671 483 LGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV------------------ 544 (834)
T ss_pred hhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC------------------
Confidence 99999999999999999999999999999999999999999999999999999987643210
Q ss_pred cCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHh
Q psy886 514 PIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIA 593 (962)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~ 593 (962)
+...+. ..++++++. ..+|.+.|++.++.......
T Consensus 545 ---------------~~~~~l--~~a~~~e~~--------------s~hp~a~Ai~~~~~~~~~~~-------------- 579 (834)
T PRK10671 545 ---------------DEAQAL--RLAAALEQG--------------SSHPLARAILDKAGDMTLPQ-------------- 579 (834)
T ss_pred ---------------CHHHHH--HHHHHHhCC--------------CCCHHHHHHHHHHhhCCCCC--------------
Confidence 011122 222333322 35799999998775322100
Q ss_pred hhhHHhhhceeeEeecCCCCC-ceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 594 VRQDVETKWKKEFTLEFSRDR-KSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 594 ~~~~~~~~~~~~~~~pF~s~r-k~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
.. +|.... +-+...+ + + ..+.+|+++.+.+.. .. ++.+.+.
T Consensus 580 -----~~--------~~~~~~g~Gv~~~~--~--------g-~~~~~G~~~~~~~~~-----------~~---~~~~~~~ 621 (834)
T PRK10671 580 -----VN--------GFRTLRGLGVSGEA--E--------G-HALLLGNQALLNEQQ-----------VD---TKALEAE 621 (834)
T ss_pred -----cc--------cceEecceEEEEEE--C--------C-EEEEEeCHHHHHHcC-----------CC---hHHHHHH
Confidence 00 111111 1122111 1 1 245679988764321 11 1123333
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.+++. .+|.+++.+|+ |..++|++++.|++||+++++|++|++.|++++|+|||+
T Consensus 622 ~~~~~--~~g~~~v~va~-----------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~ 676 (834)
T PRK10671 622 ITAQA--SQGATPVLLAV-----------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDN 676 (834)
T ss_pred HHHHH--hCCCeEEEEEE-----------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCC
Confidence 44443 67888887773 346899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCC
Q psy886 753 KATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDN 805 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~ 805 (962)
..+|.++|+++||.. +|+.++.+.+++||+|||||+|+|.++++||+++++|+
T Consensus 677 ~~~a~~ia~~lgi~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~ 756 (834)
T PRK10671 677 PTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHS 756 (834)
T ss_pred HHHHHHHHHHcCCCEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCC
Confidence 999999999999943 01112333457999999999999999999999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH
Q psy886 806 FSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV 839 (962)
Q Consensus 806 f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~ 839 (962)
+..|.+++++||++++||++|+.|.+.||+..+.
T Consensus 757 ~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 757 LMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976543
|
|
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-68 Score=606.90 Aligned_cols=670 Identities=21% Similarity=0.271 Sum_probs=466.2
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH--HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA--STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQ 117 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 117 (962)
+....+...||.|.+..+.+....... ..++.+++.++++++|.... +++.++.|+++..++.++..|+
T Consensus 164 ~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~---------Y~~YA~cI~iisv~Si~~sv~e 234 (1140)
T KOG0208|consen 164 QEIIDRRIIYGRNVISLPIKSISQILVKEVLNPFYLFQAFSVALWLADS---------YYYYAFCIVIISVYSIVLSVYE 234 (1140)
T ss_pred HHHHhHHhhcCCceeeeecccHHHHHHHhccchHHHHHhHHhhhhhccc---------chhhhhHHHHHHHHHHHHHHHH
Confidence 346677888999999877765544433 78999999999999986543 3566788888888899999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcC-CCccCCCceEEeeecceeeeecccccCCCcce
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV-GDKIPADIRLIKIYSTTIRIDQSILTGESVSV 196 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~-G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv 196 (962)
.++.++.++++.+. +..++|+|+|. |++|+++||+|||++.+.+ |-..|||++|++ ++|.||||||||||+||
T Consensus 235 ~r~qs~rlr~mv~~-~~~V~V~R~g~--~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~---g~civNEsmLTGESVPv 308 (1140)
T KOG0208|consen 235 TRKQSIRLRSMVKF-TCPVTVIRDGF--WETVDSSELVPGDILYIPPPGKIMPCDALLIS---GDCIVNESMLTGESVPV 308 (1140)
T ss_pred HHHHHHHHHHHhcC-CceEEEEECCE--EEEEeccccccccEEEECCCCeEeecceEEEe---CcEEeecccccCCcccc
Confidence 99999999988875 46899999987 8999999999999999988 889999999995 55669999999999999
Q ss_pred eecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEe
Q psy886 197 IKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEV 276 (962)
Q Consensus 197 ~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l 276 (962)
.|.+.... .
T Consensus 309 ~K~~l~~~--~--------------------------------------------------------------------- 317 (1140)
T KOG0208|consen 309 TKTPLPMG--T--------------------------------------------------------------------- 317 (1140)
T ss_pred cccCCccc--c---------------------------------------------------------------------
Confidence 99765300 0
Q ss_pred CCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeee------ceEEEEEEEec
Q psy886 277 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAA------GKARGIVMGTG 350 (962)
Q Consensus 277 ~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~------G~~~~vV~~tG 350 (962)
++..+. .. .....++|.+|.||.+.+ +.+.++|++||
T Consensus 318 ----------------------------~~~~~~-~~--------~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTG 360 (1140)
T KOG0208|consen 318 ----------------------------DSLDSI-TI--------SMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTG 360 (1140)
T ss_pred ----------------------------ccCcCe-ee--------chhhcCcceeeccceEEEeecCCCCceEEEEEecc
Confidence 000000 00 011234689999999965 45899999999
Q ss_pred cchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy886 351 LNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAI 430 (962)
Q Consensus 351 ~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~i 430 (962)
..|..|++.+++-.++.....+-+..-++...+ .++.++.+++.+.. +. ..+.+. -..++.++.++...+
T Consensus 361 F~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l--~~ia~~gfiy~~i~--l~--~~g~~~----~~iiirsLDliTi~V 430 (1140)
T KOG0208|consen 361 FSTTKGQLVRSILYPKPVNFKFYRDSFKFILFL--VIIALIGFIYTAIV--LN--LLGVPL----KTIIIRSLDLITIVV 430 (1140)
T ss_pred ccccccHHHHhhcCCCCcccHHHHHHHHHHHHH--HHHHHHHHHHHhHh--HH--HcCCCH----HHHhhhhhcEEEEec
Confidence 999999999999887654444444443333322 22222222221111 10 112121 236788999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCC
Q psy886 431 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGS 510 (962)
Q Consensus 431 P~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 510 (962)
|++||+++++...++..|+.|+|++|-++..+...|+++++|||||||||++.+.+-.+................. ..
T Consensus 431 PPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~--~~ 508 (1140)
T KOG0208|consen 431 PPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVT--ED 508 (1140)
T ss_pred CCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhh--hh
Confidence 9999999999999999999999999999999999999999999999999999999988876432110000000000 00
Q ss_pred ccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCC------------
Q psy886 511 TYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPF------------ 578 (962)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~------------ 578 (962)
+.+..-+...++. ......+..+++.||......+ ...|||.|.-+.+...-.-..
T Consensus 509 ~~~~~~~l~~~~~------~~~~~~~~~a~atCHSL~~v~g------~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~ 576 (1140)
T KOG0208|consen 509 SLQLFYKLSLRSS------SLPMGNLVAAMATCHSLTLVDG------TLVGDPLDLKMFESTGWVYEEADIEDEATREFN 576 (1140)
T ss_pred hccceeecccccc------CCchHHHHHHHhhhceeEEeCC------eeccCceeeeeeeccceEEEeccccchhhhhhC
Confidence 0000000000000 0113356677889996554322 245677665444322110000
Q ss_pred CcccCCCchhhHH-HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCe
Q psy886 579 NVSKSGLGRREQA-IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQ 657 (962)
Q Consensus 579 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~ 657 (962)
.....-+...+.. ....+.....+.++..+||+|.-+||||++..++. ...++|+|||||.|.+.|++...
T Consensus 577 ~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e-----~~~~~ftKGaPE~I~~ic~p~tv--- 648 (1140)
T KOG0208|consen 577 TLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGE-----DKMMVFTKGAPESIAEICKPETV--- 648 (1140)
T ss_pred CccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCC-----CceEeeccCCHHHHHHhcCcccC---
Confidence 0000000000000 00000112257889999999999999999997643 27899999999999999986422
Q ss_pred eeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHH
Q psy886 658 KFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIAR 737 (962)
Q Consensus 658 ~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~ 737 (962)
...+++..++|+ .+|+|++|+|+|+++.. .........++.+|+||+|+|++.||+++|++.+++|++
T Consensus 649 --------P~dy~evl~~Yt--~~GfRVIAlA~K~L~~~--~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~e 716 (1140)
T KOG0208|consen 649 --------PADYQEVLKEYT--HQGFRVIALASKELETS--TLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDE 716 (1140)
T ss_pred --------CccHHHHHHHHH--hCCeEEEEEecCccCcc--hHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHH
Confidence 234566777885 89999999999998754 122223345678899999999999999999999999999
Q ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc----------------------------------------------
Q psy886 738 CRAAGIRVIVITGDNKATAEAICRRIGVFTEEED---------------------------------------------- 771 (962)
Q Consensus 738 l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~---------------------------------------------- 771 (962)
|++|.||++|+||||..||+.+||+||++.+...
T Consensus 717 L~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d 796 (1140)
T KOG0208|consen 717 LNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLD 796 (1140)
T ss_pred HHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChh
Confidence 9999999999999999999999999999754210
Q ss_pred ----------ccCCCC--------------------------------------------------------CcCcEEEe
Q psy886 772 ----------TTGKSY--------------------------------------------------------SKAEIGIA 785 (962)
Q Consensus 772 ----------~~g~~l--------------------------------------------------------~~AdVGIA 785 (962)
++|+.+ ++|||||+
T Consensus 797 ~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGIS 876 (1140)
T KOG0208|consen 797 VLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGIS 876 (1140)
T ss_pred hhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcc
Confidence 001100 38999999
Q ss_pred cc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H-----
Q psy886 786 MG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----- 858 (962)
Q Consensus 786 mg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----- 858 (962)
.+ .. |.-||...---.+.+.+++.|+|||...-.=-..++|...|.+.+.+.+++...- ..-|+-.| |
T Consensus 877 LSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~--~~nl~D~Qfl~iDLl 951 (1140)
T KOG0208|consen 877 LSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYLI--NSNLGDLQFLFIDLL 951 (1140)
T ss_pred hhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeee--cccccchhhhhhHHH
Confidence 97 32 3344555555568999999999999999999999999988887766554432222 23344455 3
Q ss_pred --------hhCcccccccccCCCCcCccchh
Q psy886 859 --------TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 859 --------~~d~~~a~al~~e~~~~~~m~~p 881 (962)
....-|+--|+--||...++..+
T Consensus 952 ii~pia~~m~~~~a~~~L~~~rP~~~L~s~~ 982 (1140)
T KOG0208|consen 952 IITPIAVMMSRFDASDKLFPKRPPTNLLSKK 982 (1140)
T ss_pred HHHHHHHHHccCcHHHHhcCCCCCccccccc
Confidence 33344566666677777777776
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-67 Score=622.48 Aligned_cols=508 Identities=22% Similarity=0.318 Sum_probs=393.2
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy886 54 VTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFNS-------TLTSFVEPFVILLILIANAIVGVWQERNAESAIE 126 (962)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 126 (962)
+++++++..++.+..+|++++++..+..+.++.+....+ ...+|..+.++++++.++++++.+.++|+++.++
T Consensus 4 ~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~ 83 (562)
T TIGR01511 4 PFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDALS 83 (562)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555556677777776666666554432211 1235666677788899999999999999999999
Q ss_pred HHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCc
Q psy886 127 ALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDP 206 (962)
Q Consensus 127 ~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~ 206 (962)
+|.++.|++++++|+++. +++||+++|+|||+|.|++||+|||||+|++|++. ||||+|||||.|+.|++|
T Consensus 84 ~L~~~~p~~a~~~~~~~~-~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~---vdes~lTGEs~pv~k~~g----- 154 (562)
T TIGR01511 84 KLAKLQPSTATLLTKDGS-IEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESE---VDESLVTGESLPVPKKVG----- 154 (562)
T ss_pred HHHhcCCCEEEEEECCCe-EEEEEHHHCCCCCEEEECCCCEecCceEEEECceE---EehHhhcCCCCcEEcCCC-----
Confidence 999999999999997552 68999999999999999999999999999976443 666666665555555322
Q ss_pred ccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceE
Q psy886 207 RAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286 (962)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~ 286 (962)
T Consensus 155 -------------------------------------------------------------------------------- 154 (562)
T TIGR01511 155 -------------------------------------------------------------------------------- 154 (562)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccc
Q psy886 287 RLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETE 366 (962)
Q Consensus 287 ~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~ 366 (962)
+.+|+||.+.+|.+++.|+++|.+|.+|||.+++.+++
T Consensus 155 ------------------------------------------d~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~ 192 (562)
T TIGR01511 155 ------------------------------------------DPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQ 192 (562)
T ss_pred ------------------------------------------CEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHH
Q psy886 367 EIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGT 446 (962)
Q Consensus 367 ~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~ 446 (962)
.+++|+|+..+++++++.+++++++++.+++|. ..+..++++++++|||+|++++++++..+.
T Consensus 193 ~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~ 255 (562)
T TIGR01511 193 QSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-----------------FALEFAVTVLIIACPCALGLATPTVIAVAT 255 (562)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHH
Confidence 999999999999999999988888877766542 247789999999999999999999999999
Q ss_pred HHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccC
Q psy886 447 RRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIK 526 (962)
Q Consensus 447 ~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (962)
.+++|+|+++|+..++|+|+++++||||||||||+|+|+|.++...+..
T Consensus 256 ~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------------------------------- 304 (562)
T TIGR01511 256 GLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR------------------------------- 304 (562)
T ss_pred HHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-------------------------------
Confidence 9999999999999999999999999999999999999999998653310
Q ss_pred CCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeE
Q psy886 527 GADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEF 606 (962)
Q Consensus 527 ~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (962)
+.+.+..+ +.+++.. ..+|.+.|++.++++.+..... .....
T Consensus 305 --~~~~~l~~--aa~~e~~--------------s~HPia~Ai~~~~~~~~~~~~~--------------------~~~~~ 346 (562)
T TIGR01511 305 --DRTELLAL--AAALEAG--------------SEHPLAKAIVSYAKEKGITLVE--------------------VSDFK 346 (562)
T ss_pred --CHHHHHHH--HHHHhcc--------------CCChHHHHHHHHHHhcCCCcCC--------------------CCCeE
Confidence 01222222 2223221 3579999999998876532110 00011
Q ss_pred eecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhhee
Q psy886 607 TLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCL 686 (962)
Q Consensus 607 ~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl 686 (962)
++| .+.+...+. + .-+..|+++.+.+.. . .+++ + ..+|.+++
T Consensus 347 ~~~----g~Gi~~~~~----------g-~~~~iG~~~~~~~~~-------~--~~~~------------~--~~~g~~~~ 388 (562)
T TIGR01511 347 AIP----GIGVEGTVE----------G-TKIQLGNEKLLGENA-------I--KIDG------------K--AEQGSTSV 388 (562)
T ss_pred EEC----CceEEEEEC----------C-EEEEEECHHHHHhCC-------C--CCCh------------h--hhCCCEEE
Confidence 111 222222221 1 234567766543211 0 0110 1 13455554
Q ss_pred eEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 687 GLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 687 ~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.++ .|.+++|+++++|++|||++++|++||+.|++++|+|||+..+|..+|+++||.
T Consensus 389 ~~~-----------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 389 LVA-----------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred EEE-----------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 443 577899999999999999999999999999999999999999999999999983
Q ss_pred C--------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHH
Q psy886 767 T--------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIY 820 (962)
Q Consensus 767 ~--------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~ 820 (962)
- +|+..+.+.+++|||||+||.|+++++++||+++++|++..|++++++||+++
T Consensus 446 ~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~ 525 (562)
T TIGR01511 446 VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTL 525 (562)
T ss_pred EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 1 01122333457999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHH
Q psy886 821 NNMKQFIRYLISSNIGEVV 839 (962)
Q Consensus 821 ~ni~k~i~~~l~~ni~~~~ 839 (962)
+||++|+.|++.+|+..+.
T Consensus 526 ~~i~qn~~~a~~~n~~~i~ 544 (562)
T TIGR01511 526 RRIKQNLLWAFGYNVIAIP 544 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-69 Score=584.77 Aligned_cols=589 Identities=26% Similarity=0.392 Sum_probs=432.1
Q ss_pred HHHhhhhhhccCccccCCCChhHHHHHH--HH----HHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIAST--NF----AVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVG 114 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 114 (962)
.+..+...||+|++..++.+..+++.+. ++ .-.+++.++.+. .. .+....|.+...|..++++|..++
T Consensus 41 E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~La--ng----~~~~~DW~DF~gI~~LLliNsti~ 114 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGLA--NG----GGRPPDWQDFVGICCLLLINSTIS 114 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHHh--cC----CCCCcchhhhhhhheeeeecceee
Confidence 4667888999999999998888888732 22 222222222221 11 122336888899999999999888
Q ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCc
Q psy886 115 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194 (962)
Q Consensus 115 ~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~ 194 (962)
+.+|+++.++..+|++-...++.|+|||+ |.+
T Consensus 115 FveE~nAGn~aa~L~a~LA~KakVlRDGk--w~E---------------------------------------------- 146 (942)
T KOG0205|consen 115 FIEENNAGNAAAALMAGLAPKAKVLRDGK--WSE---------------------------------------------- 146 (942)
T ss_pred eeeccccchHHHHHHhccCcccEEeecCe--eee----------------------------------------------
Confidence 88888887777777776666666777666 444
Q ss_pred ceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEE
Q psy886 195 SVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIV 274 (962)
Q Consensus 195 Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV 274 (962)
+.+++||||||+
T Consensus 147 --------------------------------------------------------------------~eAs~lVPGDIl 158 (942)
T KOG0205|consen 147 --------------------------------------------------------------------QEASILVPGDIL 158 (942)
T ss_pred --------------------------------------------------------------------eeccccccCcee
Confidence 445555555555
Q ss_pred EeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchh
Q psy886 275 EVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTA 354 (962)
Q Consensus 275 ~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~ 354 (962)
.++.||.||||+||+++ .-++||+|+|||||.|+.|+++ +-+|+||+|.+|++.+||++||.+|.
T Consensus 159 sik~GdIiPaDaRLl~g--D~LkiDQSAlTGESLpvtKh~g-------------d~vfSgSTcKqGE~eaVViATg~~TF 223 (942)
T KOG0205|consen 159 SIKLGDIIPADARLLEG--DPLKIDQSALTGESLPVTKHPG-------------DEVFSGSTCKQGEIEAVVIATGVHTF 223 (942)
T ss_pred eeccCCEecCccceecC--CccccchhhhcCCccccccCCC-------------CceecccccccceEEEEEEEecccee
Confidence 55555555555555543 3678999999999999999985 56999999999999999999999999
Q ss_pred hHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCch
Q psy886 355 IGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGL 434 (962)
Q Consensus 355 ~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~L 434 (962)
.||-+.++.. ......+|+-++.++.++...+++-.++.+.+.+.. ....++...+ ..+.+++..||.+|
T Consensus 224 ~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~------q~R~~r~~i~---nLlvllIGgiPiam 293 (942)
T KOG0205|consen 224 FGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPI------QHRLYRDGID---NLLVLLIGGIPIAM 293 (942)
T ss_pred ehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh------hhhhhhhhhh---heheeeeccccccc
Confidence 9999999877 566788999999988876554332222222221111 0111111111 22334445599999
Q ss_pred HHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEE--E-EEeccccCCCCCcceEEEeCCc
Q psy886 435 PAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSR--M-FIFDKIEGSDSSFLEFEITGST 511 (962)
Q Consensus 435 p~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~--~-~~~~~~~~~~~~~~~~~~~~~~ 511 (962)
|.+++++++.|+.|++++|++++++.++|+|+.++++|+|||||||.|+++|.+ + ++..+
T Consensus 294 PtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------------- 356 (942)
T KOG0205|consen 294 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------------- 356 (942)
T ss_pred ceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-----------------
Confidence 999999999999999999999999999999999999999999999999999876 2 11111
Q ss_pred cccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHH
Q psy886 512 YEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591 (962)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 591 (962)
.+.+.+.-+ .|-.+..+ .-|..|.|++...+.
T Consensus 357 ----------------v~~D~~~L~-----A~rAsr~e----------n~DAID~A~v~~L~d----------------- 388 (942)
T KOG0205|consen 357 ----------------VDKDDVLLT-----AARASRKE----------NQDAIDAAIVGMLAD----------------- 388 (942)
T ss_pred ----------------CChHHHHHH-----HHHHhhhc----------ChhhHHHHHHHhhcC-----------------
Confidence 111222111 11111111 236677787765431
Q ss_pred HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHH
Q psy886 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILD 671 (962)
Q Consensus 592 ~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 671 (962)
.+..+..|+.++-+||++..||.+..+.++++ +..-.+|||||.|++.|+. +.+.++++.+
T Consensus 389 ---PKeara~ikevhF~PFnPV~Krta~ty~d~dG------~~~r~sKGAPeqil~l~~~----------~~~i~~~vh~ 449 (942)
T KOG0205|consen 389 ---PKEARAGIKEVHFLPFNPVDKRTALTYIDPDG------NWHRVSKGAPEQILKLCNE----------DHDIPERVHS 449 (942)
T ss_pred ---HHHHhhCceEEeeccCCccccceEEEEECCCC------CEEEecCCChHHHHHHhhc----------cCcchHHHHH
Confidence 12256778999999999999999988876543 5677899999999999973 4466788889
Q ss_pred HHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCC
Q psy886 672 LTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 751 (962)
Q Consensus 672 ~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD 751 (962)
.+++|+ ++|+|-|++|++..+....+. -.....|+|+.-+-||||.+..++|++...-|++|.|+|||
T Consensus 450 ~id~~A--eRGlRSLgVArq~v~e~~~~~----------~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitgd 517 (942)
T KOG0205|consen 450 IIDKFA--ERGLRSLAVARQEVPEKTKES----------PGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 517 (942)
T ss_pred HHHHHH--HhcchhhhhhhhccccccccC----------CCCCcccccccccCCCCccchHHHHHHHHhccceeeeecch
Confidence 999996 999999999998776443211 13567899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCC---------------------------------------------------------CCccccC
Q psy886 752 NKATAEAICRRIGVFT---------------------------------------------------------EEEDTTG 774 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~---------------------------------------------------------~~~~~~g 774 (962)
...-|+..++++|+-. +|++.++
T Consensus 518 qlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvnda 597 (942)
T KOG0205|consen 518 QLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDA 597 (942)
T ss_pred HHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccc
Confidence 9999999999998721 1112233
Q ss_pred CCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHhCCCccc
Q psy886 775 KSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV-SIFLTAALGLPEAL 853 (962)
Q Consensus 775 ~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~-~~~~~~~~~~~~pl 853 (962)
+++++||+|||+...||+|+.||||||++..++.|+.|+.-+|.+|++++.+..|.++..+-.++ .++++.++.+ -|
T Consensus 598 paLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~--df 675 (942)
T KOG0205|consen 598 PALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEF--DF 675 (942)
T ss_pred hhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHh--cC
Confidence 45579999999999999999999999999999999999999999999999999999887766442 2333444433 34
Q ss_pred hhHH-H---hhCcccccccccCCCC
Q psy886 854 IKKI-S---TTNRGKKKKLSYNFLD 874 (962)
Q Consensus 854 ~~~q-L---~~d~~~a~al~~e~~~ 874 (962)
+|.. | +.+--+-++.+.+...
T Consensus 676 ~pfmvliiailnd~t~mtis~d~v~ 700 (942)
T KOG0205|consen 676 SPFMVLIIAILNDGTIMTISKDRVK 700 (942)
T ss_pred CHHHHHHHHHhcCCceEEEEcccCC
Confidence 4444 2 6666677777776544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-67 Score=616.80 Aligned_cols=452 Identities=39% Similarity=0.531 Sum_probs=382.6
Q ss_pred ccccch--hHHHHhHHHHHHHHHh--cCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 223 HKCGRM--VQLERNAESAIEALKE--YEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 223 ~~~gr~--~~~e~ra~~~l~~L~~--~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.+++++ .+.++++++.+++|++ +.|++++|+|+| +++|++++|+|||+|.+++||+|||||++++ +.+.|
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g---~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~v 79 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG---WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCFV 79 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC---eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEEE
Confidence 345565 6789999999999999 899999999988 6899999999999999999999999999996 47899
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHH
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDE 378 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~ 378 (962)
|||+|||||.|+.|.++ +.+++||.+.+|+.++.|+++|.+|..+++...+......++|++++.++
T Consensus 80 des~LTGEs~pv~k~~g-------------~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~ 146 (499)
T TIGR01494 80 DESNLTGESVPVLKTAG-------------DAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDR 146 (499)
T ss_pred EcccccCCCCCeeeccC-------------CccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHH
Confidence 99999999999999874 67899999999999999999999999999999998888879999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccC
Q psy886 379 FG-EQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVR 457 (962)
Q Consensus 379 ~~-~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr 457 (962)
+. .++.++++++++++++++...+.. ..+| ...+..++++++++|||+||+++++++..+..+|+++|+++|
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~~~---~~~~----~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 147 LSDIIFILFVLLIALAVFLFWAIGLWD---PNSI----FKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc---cccH----HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 99 677777777666666554322110 0013 346888999999999999999999999999999999999999
Q ss_pred CchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHH
Q psy886 458 SLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELG 537 (962)
Q Consensus 458 ~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 537 (962)
+++++|+||+++++|||||||||+|+|+|.+++..+.
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------- 256 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------- 256 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------------------
Confidence 9999999999999999999999999999999865321
Q ss_pred HHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceE
Q psy886 538 TICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSM 617 (962)
Q Consensus 538 ~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m 617 (962)
.+..++|.|.|++.++++. .....||++.+|+|
T Consensus 257 -------------------~~~s~hp~~~ai~~~~~~~----------------------------~~~~~~f~~~~~~~ 289 (499)
T TIGR01494 257 -------------------EYLSGHPDERALVKSAKWK----------------------------ILNVFEFSSVRKRM 289 (499)
T ss_pred -------------------CcCCCChHHHHHHHHhhhc----------------------------CcceeccCCCCceE
Confidence 0124689999999877531 12357999999999
Q ss_pred EEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCc
Q psy886 618 SSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKP 697 (962)
Q Consensus 618 svv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~ 697 (962)
+++++..+ + .|+||+++.++++|.+. .+..++++ .+|+|++++|++.
T Consensus 290 ~~~~~~~~-------~--~~~~G~~~~i~~~~~~~-----------------~~~~~~~~--~~g~~~~~~a~~~----- 336 (499)
T TIGR01494 290 SVIVRGPD-------G--TYVKGAPEFVLSRVKDL-----------------EEKVKELA--QSGLRVLAVASKE----- 336 (499)
T ss_pred EEEEecCC-------c--EEEeCCHHHHHHhhHHH-----------------HHHHHHHH--hCCCEEEEEEECC-----
Confidence 99987521 2 47899999999988531 11223343 6899999999642
Q ss_pred cccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---------
Q psy886 698 EDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------- 768 (962)
Q Consensus 698 ~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------- 768 (962)
+++|+++++|++|++++++|+.|+++|++++|+|||++.||.++|+++||...
T Consensus 337 ------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi~~~~~p~~K~~~ 398 (499)
T TIGR01494 337 ------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGIFARVTPEEKAAL 398 (499)
T ss_pred ------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCceeccCHHHHHHH
Confidence 58999999999999999999999999999999999999999999999998321
Q ss_pred ---------------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHh
Q psy886 769 ---------------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISS 833 (962)
Q Consensus 769 ---------------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ 833 (962)
|+.++..++++|||||||| |+++||++|++|++..++.++++||+++++|++++.|.+.+
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~ 473 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAY 473 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223334567999999997 79999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q psy886 834 NIGEVVSIFLTAA 846 (962)
Q Consensus 834 ni~~~~~~~~~~~ 846 (962)
|+..+.+.+.+.+
T Consensus 474 n~~~~~~a~~~~~ 486 (499)
T TIGR01494 474 NLILIPLAALLAV 486 (499)
T ss_pred HHHHHHHHHHHHH
Confidence 9987666655443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-66 Score=618.32 Aligned_cols=480 Identities=24% Similarity=0.329 Sum_probs=377.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECC-CccEEEEeCCCCCCCCEEEEcCCCccCCCceE
Q psy886 96 SFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGD-KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 174 (962)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~-~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 174 (962)
.|.+++.++++++++.+++.++++|+++.+++|.++.|..++|+|+| + +++||.++|+|||+|.|++||+|||||+|
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 94 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGS--EEEVPVEELQVGDIVIVRPGERIPVDGVV 94 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCe--EEEEEHHHCCCCCEEEECCCCEeccceEE
Confidence 36788999999999999999999999999999999999999999996 6 79999999999999999999999999999
Q ss_pred EeeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeee
Q psy886 175 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIR 254 (962)
Q Consensus 175 ~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR 254 (962)
++|.+ .||||+|||||
T Consensus 95 i~g~~---~vdes~lTGEs------------------------------------------------------------- 110 (556)
T TIGR01525 95 ISGES---EVDESALTGES------------------------------------------------------------- 110 (556)
T ss_pred Eecce---EEeehhccCCC-------------------------------------------------------------
Confidence 96532 25555555555
Q ss_pred CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecC
Q psy886 255 GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSG 334 (962)
Q Consensus 255 ~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aG 334 (962)
.|+.|.++ +.+|+|
T Consensus 111 -----------------------------------------------------~pv~k~~g-------------~~v~aG 124 (556)
T TIGR01525 111 -----------------------------------------------------MPVEKKEG-------------DEVFAG 124 (556)
T ss_pred -----------------------------------------------------CCEecCCc-------------CEEeec
Confidence 44444432 569999
Q ss_pred ceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHH
Q psy886 335 TNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKG 414 (962)
Q Consensus 335 T~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 414 (962)
|.+.+|.++++|++||.+|.+|+|.+++.+++.+++|+|+.+++++.++.+++++++++++++++... .+
T Consensus 125 t~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~--- 194 (556)
T TIGR01525 125 TINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL--- 194 (556)
T ss_pred eEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc---
Confidence 99999999999999999999999999999888899999999999999999988888888877754211 01
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEecc
Q psy886 415 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDK 494 (962)
Q Consensus 415 ~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~ 494 (962)
..+..++++++++|||+||++++++++.+.++|+|+|+++|+++++|+||+++++|||||||||+|+|+|.+++..++
T Consensus 195 --~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~ 272 (556)
T TIGR01525 195 --GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDD 272 (556)
T ss_pred --hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCC
Confidence 357789999999999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred ccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHH
Q psy886 495 IEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEK 574 (962)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~ 574 (962)
.. ...+.+.. .++.+. ....+|.+.|++.++++
T Consensus 273 ~~-------------------------------~~~~~~l~---~a~~~e-------------~~~~hp~~~Ai~~~~~~ 305 (556)
T TIGR01525 273 AS-------------------------------ISEEELLA---LAAALE-------------QSSSHPLARAIVRYAKK 305 (556)
T ss_pred CC-------------------------------ccHHHHHH---HHHHHh-------------ccCCChHHHHHHHHHHh
Confidence 10 00122222 111111 12368999999999987
Q ss_pred cCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhccccccc
Q psy886 575 LNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARI 654 (962)
Q Consensus 575 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~ 654 (962)
.+..... .+ ...++| .+ +...++||+++..+..|+....
T Consensus 306 ~~~~~~~-------------------~~-~~~~~~----~~-----------------gi~~~~~g~~~~~lg~~~~~~~ 344 (556)
T TIGR01525 306 RGLELPK-------------------QE-DVEEVP----GK-----------------GVEATVDGQEEVRIGNPRLLEL 344 (556)
T ss_pred cCCCccc-------------------cc-CeeEec----CC-----------------eEEEEECCeeEEEEecHHHHhh
Confidence 6542100 00 001111 11 3344455555555545543211
Q ss_pred CCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHH
Q psy886 655 GSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDS 734 (962)
Q Consensus 655 ~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~ea 734 (962)
++.. . .......+++. .+|+|++.++ .|.+++|.+.++|++|||++++
T Consensus 345 ~~~~--~-----~~~~~~~~~~~--~~g~~~~~v~-----------------------~~~~~~g~i~~~d~~~~g~~e~ 392 (556)
T TIGR01525 345 AAEP--I-----SASPDLLNEGE--SQGKTVVFVA-----------------------VDGELLGVIALRDQLRPEAKEA 392 (556)
T ss_pred cCCC--c-----hhhHHHHHHHh--hCCcEEEEEE-----------------------ECCEEEEEEEecccchHhHHHH
Confidence 1111 1 11122233343 6788888876 3458999999999999999999
Q ss_pred HHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCCCC---------------------------CccccCCCCCcCcEEEec
Q psy886 735 IARCRAAG-IRVIVITGDNKATAEAICRRIGVFTE---------------------------EEDTTGKSYSKAEIGIAM 786 (962)
Q Consensus 735 I~~l~~AG-I~v~MiTGD~~~TA~~IA~~~GI~~~---------------------------~~~~~g~~l~~AdVGIAm 786 (962)
|+.|+++| ++++|+|||+..+|.++++++||..- |+..+.+.+++|||||+|
T Consensus 393 l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~ 472 (556)
T TIGR01525 393 IAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM 472 (556)
T ss_pred HHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe
Confidence 99999999 99999999999999999999999421 011122234799999999
Q ss_pred cChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH
Q psy886 787 GSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV 839 (962)
Q Consensus 787 g~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~ 839 (962)
|.+++.++++||+++.+|+++.|++++++||++++||++++.|++++|+..+.
T Consensus 473 g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 473 GAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987653
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-65 Score=599.73 Aligned_cols=460 Identities=24% Similarity=0.358 Sum_probs=364.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEE
Q psy886 96 SFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 175 (962)
Q Consensus 96 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~ 175 (962)
.|++++.++++++++.+++.++++|+++.+++|.++.|++++|+|+|+ ++++++++|+|||+|.|++||+|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii 94 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGS--LEEVAVEELKVGDVVVVKPGERVPVDGVVL 94 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCE--EEEEEHHHCCCCCEEEEcCCCEeecceEEE
Confidence 377888899999999999999999999999999999999999999998 799999999999999999999999999999
Q ss_pred eeecceeeeecccccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeC
Q psy886 176 KIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRG 255 (962)
Q Consensus 176 ~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~ 255 (962)
+|.+. ||||+|||||.|+.|
T Consensus 95 ~g~~~---vdes~lTGEs~pv~k--------------------------------------------------------- 114 (536)
T TIGR01512 95 SGTST---VDESALTGESVPVEK--------------------------------------------------------- 114 (536)
T ss_pred eCcEE---EEecccCCCCCcEEe---------------------------------------------------------
Confidence 75332 555555555555444
Q ss_pred CccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCc
Q psy886 256 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGT 335 (962)
Q Consensus 256 g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT 335 (962)
+++ +.+|+||
T Consensus 115 ---------------------------------------------------------~~g-------------~~v~aGt 124 (536)
T TIGR01512 115 ---------------------------------------------------------APG-------------DEVFAGA 124 (536)
T ss_pred ---------------------------------------------------------CCC-------------CEEEeee
Confidence 432 4689999
Q ss_pred eeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHH
Q psy886 336 NVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGA 415 (962)
Q Consensus 336 ~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 415 (962)
.+.+|+++++|++||.+|.+|||.+++.+.+.+++|+|+.++++++++.++++++++++|+++... . .+
T Consensus 125 ~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~---- 193 (536)
T TIGR01512 125 INLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL------K-RW---- 193 (536)
T ss_pred EECCceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------c-cc----
Confidence 999999999999999999999999999988889999999999999999999888888777765321 1 11
Q ss_pred HHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccc
Q psy886 416 VYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKI 495 (962)
Q Consensus 416 ~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 495 (962)
...+.+++++++++|||+||+++++++..+..+++|+|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 194 ~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--- 270 (536)
T TIGR01512 194 PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--- 270 (536)
T ss_pred HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---
Confidence 12577889999999999999999999999999999999999999999999999999999999999999999887421
Q ss_pred cCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHc
Q psy886 496 EGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKL 575 (962)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~ 575 (962)
+++..++.+. ....+|.+.|++.++++.
T Consensus 271 ---------------------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~ 298 (536)
T TIGR01512 271 ---------------------------------------EVLRLAAAAE-------------QASSHPLARAIVDYARKR 298 (536)
T ss_pred ---------------------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHHHHhc
Confidence 1111111111 123679999999888654
Q ss_pred CCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccC
Q psy886 576 NPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIG 655 (962)
Q Consensus 576 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~ 655 (962)
+. +....++| .+.+...++ +. .+..|+++.+.+..
T Consensus 299 ~~------------------------~~~~~~~~----g~gi~~~~~----------g~-~~~ig~~~~~~~~~------ 333 (536)
T TIGR01512 299 EN------------------------VESVEEVP----GEGVRAVVD----------GG-EVRIGNPRSLEAAV------ 333 (536)
T ss_pred CC------------------------CcceEEec----CCeEEEEEC----------Ce-EEEEcCHHHHhhcC------
Confidence 20 00011111 111221111 11 23457665432210
Q ss_pred CeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHH
Q psy886 656 SQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSI 735 (962)
Q Consensus 656 ~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI 735 (962)
.+ .+ ..+|.+++.+ ..|..++|.+.++|++|||++++|
T Consensus 334 -----~~------------~~--~~~~~~~~~v-----------------------~~~~~~~g~i~~~d~l~~~~~e~i 371 (536)
T TIGR01512 334 -----GA------------RP--ESAGKTIVHV-----------------------ARDGTYLGYILLSDEPRPDAAEAI 371 (536)
T ss_pred -----Cc------------ch--hhCCCeEEEE-----------------------EECCEEEEEEEEeccchHHHHHHH
Confidence 00 11 1334443332 256789999999999999999999
Q ss_pred HHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCCCC---------------------------CccccCCCCCcCcEEEecc
Q psy886 736 ARCRAAGI-RVIVITGDNKATAEAICRRIGVFTE---------------------------EEDTTGKSYSKAEIGIAMG 787 (962)
Q Consensus 736 ~~l~~AGI-~v~MiTGD~~~TA~~IA~~~GI~~~---------------------------~~~~~g~~l~~AdVGIAmg 787 (962)
++|+++|+ +++|+|||+..+|..+++++||..- |+..+.+.+++||+||+||
T Consensus 372 ~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 372 AELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred HHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 99999999 9999999999999999999999421 0111222347999999999
Q ss_pred -ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 788 -SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 788 -~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
+|++.++++||+++++|++..+.+++++||++++||++|+.|++.||+..+.+
T Consensus 452 ~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 505 (536)
T TIGR01512 452 ASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505 (536)
T ss_pred CCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999764443
|
. |
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-66 Score=620.22 Aligned_cols=717 Identities=19% Similarity=0.222 Sum_probs=509.4
Q ss_pred hhccCccccCC------CChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy886 48 DFIPARVTSLS------PSENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNA 121 (962)
Q Consensus 48 ~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 121 (962)
.|..|.+..-+ .++++++++.....++.++..++.... ..++ .++......++++.+..+...++.|.+++.
T Consensus 31 ~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~-~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~ 108 (1151)
T KOG0206|consen 31 KYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF-NPYTTLVPLLFVLGITAIKDAIEDYRRHKQ 108 (1151)
T ss_pred cccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc-CccceeeceeeeehHHHHHHHHhhhhhhhc
Confidence 45555553333 256777888888889888888887765 2222 222233444555555666666677666666
Q ss_pred HHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeee--cceeeeecccccCCCcceeec
Q psy886 122 ESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKH 199 (962)
Q Consensus 122 ~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~--~~~~~vdes~lTGEs~Pv~k~ 199 (962)
.+.+. ...++|.+++.. +++..+.+|++||+|.+..++.+|||.+++..+ .+.|+|..++|.||+.--.|.
T Consensus 109 D~~iN------~~~~~v~~~~~~-~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 109 DKEVN------NRKVEVLRGDGC-FVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred cHHhh------cceeEEecCCce-eeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 65443 568899998765 789999999999999999999999999999633 256899999999998666654
Q ss_pred CCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCC
Q psy886 200 TDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVG 279 (962)
Q Consensus 200 ~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~G 279 (962)
.-...... ...
T Consensus 182 ~l~~~~~~---------------------------------------------------------------------~~~ 192 (1151)
T KOG0206|consen 182 ALECTSKL---------------------------------------------------------------------DSE 192 (1151)
T ss_pred ehhhhhcc---------------------------------------------------------------------ccc
Confidence 32110000 000
Q ss_pred Ceec--ceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeec-eEEEEEEEeccchhhH
Q psy886 280 DKIP--ADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG-KARGIVMGTGLNTAIG 356 (962)
Q Consensus 280 d~vP--aD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G-~~~~vV~~tG~~T~~g 356 (962)
+... -+.+-.+....+++. .+|.-.. ... ..+...+|++++|+.+.+. ++.|+|++||++|
T Consensus 193 ~~~~~~~~~i~cE~p~~~ly~----f~g~l~~-~~~--------~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 193 DSLKNFKGWIECEDPNANLYT----FVGNLEL-QGQ--------IYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred ccccccCCceEEcCCcccHhh----hhhheee-ccC--------CCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 0000 111111111111111 1222210 000 0035567999999999776 5999999999999
Q ss_pred HHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-CCC-Ccch-------HHHHHHHHHHHHHHH
Q psy886 357 KIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDP-AHG-GSWI-------KGAVYYFKIAVALAV 427 (962)
Q Consensus 357 ki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~-~~~-~~~~-------~~~~~~~~~~i~l~v 427 (962)
|++++...++.+++++++.++.....+..+.+++|++..+....+.... ... ..|+ ...+..|++++.++.
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 7777887889999999999999988888777777776655432222100 000 0111 123567888999999
Q ss_pred hhcCCchHHHHHHHHHHHHHHHhh----------hcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccC
Q psy886 428 AAIPEGLPAVITTCLALGTRRMAK----------KNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEG 497 (962)
Q Consensus 428 ~~iP~~Lp~~v~i~l~~~~~~m~k----------~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 497 (962)
..+|.+|++++++...+++..+.+ ..+.+|+.+..|+||+|++|++|||||||+|.|++++|.+.+..|+
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence 999999999999999998866543 4578999999999999999999999999999999999999998877
Q ss_pred CCCCcceEEEeCC-----------ccccCcceecCCCccCCCChHHHHHHHHHHhhccCCcccccccc-CceEEecChhH
Q psy886 498 SDSSFLEFEITGS-----------TYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFK-QAFEKVGEATE 565 (962)
Q Consensus 498 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~-~~~~~~g~p~e 565 (962)
............. +..-......++.+......+....+..++++||+..++..+.. ...+...+|+|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence 6543221111100 00000111111111111345667888999999999988773322 45778899999
Q ss_pred HHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHH
Q psy886 566 TALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGV 645 (962)
Q Consensus 566 ~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~i 645 (962)
.||+..|+..|+....++.....-. ..+.+..|+.++.+||+|+||||||+++.+++ ++.+|||||+.+|
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~----~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g------~i~LycKGADsvI 566 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIR----ELGVEETYELLNVLEFNSTRKRMSVIVRDPDG------RILLYCKGADSVI 566 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEe----ccccceeEEEEEEeccccccceeEEEEEcCCC------cEEEEEcCcchhh
Confidence 9999999999987766544221111 11235689999999999999999999998753 7899999999999
Q ss_pred HhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccc---------------cccccccccc
Q psy886 646 LERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDM---------------NLADSTKFAS 710 (962)
Q Consensus 646 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~---------------~~~~~~~~~~ 710 (962)
+++++. -....+++..+++++|+ .+|||+|++|||+++.++... +....+.++.
T Consensus 567 ~erL~~---------~~~~~~e~T~~Hl~~yA--~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~ 635 (1151)
T KOG0206|consen 567 FERLSK---------NGEKLREKTQEHLEEYA--TEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEE 635 (1151)
T ss_pred Hhhhhh---------cchHHHHHHHHHHHHHH--hhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHH
Confidence 999975 22355677778888996 999999999999987654221 1111234567
Q ss_pred ccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc-------------------
Q psy886 711 YEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED------------------- 771 (962)
Q Consensus 711 ~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~------------------- 771 (962)
+|+||+++|.+++||+||+||||+|+.|++||||+||+|||+.|||++||.+|+++.++..
T Consensus 636 iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~ 715 (1151)
T KOG0206|consen 636 IEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATA 715 (1151)
T ss_pred HHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHH
Confidence 8999999999999999999999999999999999999999999999999999999875321
Q ss_pred -----------------------------ccCCCC---------------------------------------------
Q psy886 772 -----------------------------TTGKSY--------------------------------------------- 777 (962)
Q Consensus 772 -----------------------------~~g~~l--------------------------------------------- 777 (962)
++|+.+
T Consensus 716 ~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~ 795 (1151)
T KOG0206|consen 716 ALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKA 795 (1151)
T ss_pred HHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCc
Confidence 112211
Q ss_pred ---------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHH-HhHHHHHHHHHHHHHHHHhhHHHHHH
Q psy886 778 ---------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVE-EGRAIYNNMKQFIRYLISSNIGEVVS 840 (962)
Q Consensus 778 ---------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~-~gR~i~~ni~k~i~~~l~~ni~~~~~ 840 (962)
..|||||.++ .+-..|..+||.-+. .|.-+-+++- +||.-|.++.|.+.|.+..|+...++
T Consensus 796 ~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 796 VTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred eEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 1699999998 555556678888885 4666666554 69999999999999999999999999
Q ss_pred HHHHHHhCCC---ccchhHHH-----hhCccccccccc---CCCCcCccchh
Q psy886 841 IFLTAALGLP---EALIKKIS-----TTNRGKKKKLSY---NFLDISLLGPA 881 (962)
Q Consensus 841 ~~~~~~~~~~---~pl~~~qL-----~~d~~~a~al~~---e~~~~~~m~~p 881 (962)
.+++.++... ....+.+| +.-.+|-++||. |.+++..|+-|
T Consensus 874 ~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P 925 (1151)
T KOG0206|consen 874 LFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFP 925 (1151)
T ss_pred HHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCC
Confidence 9999887432 23444552 556788888876 66677778888
|
|
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-66 Score=565.68 Aligned_cols=687 Identities=18% Similarity=0.206 Sum_probs=472.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE-ECC
Q psy886 64 HIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI-RGD 142 (962)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~-r~~ 142 (962)
+.++.....++.++..+..+...... .....+|.....++++.++.+.++.+++++..+... .+..+++ |+|
T Consensus 100 ~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~N------se~y~~ltr~~ 172 (1051)
T KOG0210|consen 100 FEQFKFFLNLYFLLVALSQLIPALKI-GYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELN------SEKYTKLTRDG 172 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchhee-cchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh------hhhheeeccCC
Confidence 34444555555555544443322211 113345666777788888888999988887776553 3333444 666
Q ss_pred CccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeee--cceeeeecccccCCCcceeecCCCCCCcccccCCCccccccC
Q psy886 143 KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDR 220 (962)
Q Consensus 143 ~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~--~~~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~ 220 (962)
. ...|++++++||+|.++.+++||||.++++-+ ++.+.|...-|.||++---|-+-....
T Consensus 173 ~---~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ--------------- 234 (1051)
T KOG0210|consen 173 T---RREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQ--------------- 234 (1051)
T ss_pred c---ccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhc---------------
Confidence 5 33499999999999999999999999999754 466888888899988544443221110
Q ss_pred ccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC-CEEEeCCCCeecceEEEEeecCCeEEEE
Q psy886 221 NEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG-DIVEVSVGDKIPADIRLIKIYSTTIRID 299 (962)
Q Consensus 221 ~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G-DIV~l~~Gd~vPaD~~ll~~~~~~l~Vd 299 (962)
.+.-+ |+..+. |-|+-= .-|
T Consensus 235 ----------------------------------------------~l~~~~el~~i~----v~Ae~P---------~kd 255 (1051)
T KOG0210|consen 235 ----------------------------------------------HLTEDSELMEIS----VYAEKP---------QKD 255 (1051)
T ss_pred ----------------------------------------------cCCcccchheEE----EeccCc---------chh
Confidence 00001 111111 111100 011
Q ss_pred ecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHH
Q psy886 300 QSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEF 379 (962)
Q Consensus 300 eS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~ 379 (962)
=-+.+|-- |.. .++...+.+-+|+++++|.|.+|.++|+|+|||.+| |-..+...++.+-..++.++|.+
T Consensus 256 Ih~F~Gt~----~~~---d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt---RsvMNts~pr~KvGllelEiN~l 325 (1051)
T KOG0210|consen 256 IHSFVGTF----TIT---DSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT---RSVMNTSRPRSKVGLLELEINGL 325 (1051)
T ss_pred hHhhEEEE----EEe---cCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---HHHhccCCcccccceeeeecccH
Confidence 11111110 000 011113455679999999999999999999999999 76777778888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhh----cCc
Q psy886 380 GEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKK----NAI 455 (962)
Q Consensus 380 ~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~----~il 455 (962)
.+++..+++++++++..... .+..|+. .+++++.++...||.+|-+.+.++..+-.+.+.++ |.+
T Consensus 326 tKiL~~~vlvLs~vmv~~~g-------~~~~wyi----~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~Ipgtv 394 (1051)
T KOG0210|consen 326 TKILFCFVLVLSIVMVAMKG-------FGSDWYI----YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTV 394 (1051)
T ss_pred HHHHHHHHHHHHHHHHHhhc-------CCCchHH----HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCcee
Confidence 99998887777766654321 1346654 46778889999999999999999999999999876 467
Q ss_pred cCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcccc-CcceecCCCccCCCChHHHH
Q psy886 456 VRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEP-IGDVFLNGSKIKGADYETLH 534 (962)
Q Consensus 456 vr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 534 (962)
||+...-|+||+++++.+|||||||+|+|.+++++.+.-.+..+....-...-.+.+.| ..+-.......+.+....++
T Consensus 395 vRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~ 474 (1051)
T KOG0210|consen 395 VRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVR 474 (1051)
T ss_pred eecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHH
Confidence 99999999999999999999999999999999999875444332111000000001111 00000011112233445678
Q ss_pred HHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCC
Q psy886 535 ELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDR 614 (962)
Q Consensus 535 ~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~r 614 (962)
++..++++||++++..++.+...++..+|+|+|++++.+..|.....+.. .........+....|++++.|||+|+.
T Consensus 475 ~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~---~~itL~~~~~~~~~yqIL~vFPFtsEt 551 (1051)
T KOG0210|consen 475 NAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDR---HAITLRVPLDDELNYQILQVFPFTSET 551 (1051)
T ss_pred HHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeeccc---ceEEEecCCCcceeEEEEEEecccccc
Confidence 88889999999998877655677889999999999999999886554321 111111123345679999999999999
Q ss_pred ceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCC
Q psy886 615 KSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNP 694 (962)
Q Consensus 615 k~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~ 694 (962)
|||.++++++.. +++..|.|||+-++-..-.. .+.+++....| +++|||+|.+|.|.++
T Consensus 552 KRMGIIVr~e~~-----~evtfylKGAD~VMs~iVq~--------------NdWleEE~gNM--AREGLRtLVvakK~Ls 610 (1051)
T KOG0210|consen 552 KRMGIIVRDETT-----EEVTFYLKGADVVMSGIVQY--------------NDWLEEECGNM--AREGLRTLVVAKKVLS 610 (1051)
T ss_pred ceeeEEEecCCC-----ceEEEEEecchHHHhccccc--------------chhhhhhhhhh--hhhcceEEEEEecccC
Confidence 999999997643 27899999999877654321 12233444555 5999999999999887
Q ss_pred CCcccc---------------ccccccccc-cccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy886 695 LKPEDM---------------NLADSTKFA-SYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 758 (962)
Q Consensus 695 ~~~~~~---------------~~~~~~~~~-~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~ 758 (962)
.++.+. .....+..+ .+|+||.++|++|+||++|++|+.+++.||+|||||||+|||+.|||++
T Consensus 611 ~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~c 690 (1051)
T KOG0210|consen 611 EEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAIC 690 (1051)
T ss_pred HHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheee
Confidence 543211 000011112 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCcc-----------------------------ccCCCC--------------------------------
Q psy886 759 ICRRIGVFTEEED-----------------------------TTGKSY-------------------------------- 777 (962)
Q Consensus 759 IA~~~GI~~~~~~-----------------------------~~g~~l-------------------------------- 777 (962)
||++.+++..+.. ++|+.+
T Consensus 691 iAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA 770 (1051)
T KOG0210|consen 691 IAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKA 770 (1051)
T ss_pred eehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHH
Confidence 9999999764321 233322
Q ss_pred ---------------------------CcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHH-hHHHHHHHHHHHH
Q psy886 778 ---------------------------SKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEE-GRAIYNNMKQFIR 828 (962)
Q Consensus 778 ---------------------------~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~-gR~i~~ni~k~i~ 828 (962)
.+||+||.+- ..-..|.-|||.-+. .|+.+-+++.| ||+.|++--|.-+
T Consensus 771 ~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laq 848 (1051)
T KOG0210|consen 771 QVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQ 848 (1051)
T ss_pred HHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHH
Confidence 2899999875 444556778999985 59999999987 9999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhCCCccchhHH--H------hhCcccccccccCCC--CcCccchh
Q psy886 829 YLISSNIGEVVSIFLTAALGLPEALIKKI--S------TTNRGKKKKLSYNFL--DISLLGPA 881 (962)
Q Consensus 829 ~~l~~ni~~~~~~~~~~~~~~~~pl~~~q--L------~~d~~~a~al~~e~~--~~~~m~~p 881 (962)
|.+-.......+..++.......|..-.| | +..++|.++|..+.. +.-.|.-|
T Consensus 849 fViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yP 911 (1051)
T KOG0210|consen 849 FVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYP 911 (1051)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhH
Confidence 98766655444555544444445666666 3 667899999988654 23334445
|
|
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-56 Score=495.91 Aligned_cols=530 Identities=22% Similarity=0.270 Sum_probs=370.8
Q ss_pred HHhhhhhhccCccccCCCChhHHHH--HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHH
Q psy886 42 LRLRQIDFIPARVTSLSPSENVHIA--STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQER 119 (962)
Q Consensus 42 ~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 119 (962)
+......||.|......|.....+. ....++.+.+++..+|.... +|+.++..+++++.-+.--.+|+.
T Consensus 169 i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDe---------yWYySlFtLfMli~fE~tlV~Qrm 239 (1160)
T KOG0209|consen 169 IKLAKHKYGKNKFDIVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDE---------YWYYSLFTLFMLIAFEATLVKQRM 239 (1160)
T ss_pred HHHHHHHhcCCccccCCccHHHHHHHhccCceeeHhHHhHHHHHhHH---------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455999998888886555444 77888899999999998754 366677777777766666667777
Q ss_pred HHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcC---CCccCCCceEEeeecceeeeecccccCCCcce
Q psy886 120 NAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV---GDKIPADIRLIKIYSTTIRIDQSILTGESVSV 196 (962)
Q Consensus 120 ~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~---G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv 196 (962)
|+.+.++++.. .|..+.|+|+++ |+.+.++||.|||+|.+.. ...||||-+++.|++- ||||||||||.|.
T Consensus 240 ~~lse~R~Mg~-kpy~I~v~R~kK--W~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsci---VnEaMLtGESvPl 313 (1160)
T KOG0209|consen 240 RTLSEFRTMGN-KPYTINVYRNKK--WVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSCI---VNEAMLTGESVPL 313 (1160)
T ss_pred HHHHHHHhcCC-CceEEEEEecCc--ceeccccccCCCceEEeccCcccCcCCceEEEEeccee---echhhhcCCCccc
Confidence 77666665544 577999999998 9999999999999999976 5669999999977666 9999999999999
Q ss_pred eecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEe
Q psy886 197 IKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEV 276 (962)
Q Consensus 197 ~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l 276 (962)
.|++-..-+.-.
T Consensus 314 ~KE~Ie~~~~d~-------------------------------------------------------------------- 325 (1160)
T KOG0209|consen 314 MKESIELRDSDD-------------------------------------------------------------------- 325 (1160)
T ss_pred cccccccCChhh--------------------------------------------------------------------
Confidence 997653111100
Q ss_pred CCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceee-------------eceEE
Q psy886 277 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVA-------------AGKAR 343 (962)
Q Consensus 277 ~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~-------------~G~~~ 343 (962)
+ ++++. .++..++|.||.++ +|-+.
T Consensus 326 ----------~---------------ld~~~-----------------d~k~hVlfGGTkivQht~p~~~slk~pDggc~ 363 (1160)
T KOG0209|consen 326 ----------I---------------LDIDR-----------------DDKLHVLFGGTKIVQHTPPKKASLKTPDGGCV 363 (1160)
T ss_pred ----------h---------------ccccc-----------------ccceEEEEcCceEEEecCCccccccCCCCCeE
Confidence 0 00000 12335667777664 45689
Q ss_pred EEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHH
Q psy886 344 GIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAV 423 (962)
Q Consensus 344 ~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i 423 (962)
+.|++||.+|..|++.+.+-...++-|.-.++. +..++ +.++++++... +.|. ...... .+.-...|+-++
T Consensus 364 a~VlrTGFeTSQGkLvRtilf~aervTaNn~Et--f~FIL--FLlVFAiaAa~--Yvwv-~Gskd~--~RsrYKL~LeC~ 434 (1160)
T KOG0209|consen 364 AYVLRTGFETSQGKLVRTILFSAERVTANNRET--FIFIL--FLLVFAIAAAG--YVWV-EGSKDP--TRSRYKLFLECT 434 (1160)
T ss_pred EEEEeccccccCCceeeeEEecceeeeeccHHH--HHHHH--HHHHHHHHhhh--eEEE-ecccCc--chhhhheeeeee
Confidence 999999999999999988877655555433332 22122 22222222111 1111 100100 011122466677
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcc
Q psy886 424 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFL 503 (962)
Q Consensus 424 ~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~ 503 (962)
.++...||+.||+-++++...+...++|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+.-.+.-.
T Consensus 435 LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~------- 507 (1160)
T KOG0209|consen 435 LILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADE------- 507 (1160)
T ss_pred EEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCc-------
Confidence 7888899999999999999999999999999999999999999999999999999999999998874322100
Q ss_pred eEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccC
Q psy886 504 EFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKS 583 (962)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~ 583 (962)
....|.. ....+ -..+++.||+-..-.+ ...|||.|.|.+++.... ....+
T Consensus 508 ------~~~~~~s----------~~p~~----t~~vlAscHsLv~le~------~lVGDPlEKA~l~~v~W~---~~k~~ 558 (1160)
T KOG0209|consen 508 ------GALTPAS----------KAPNE----TVLVLASCHSLVLLED------KLVGDPLEKATLEAVGWN---LEKKN 558 (1160)
T ss_pred ------ccccchh----------hCCch----HHHHHHHHHHHHHhcC------cccCChHHHHHHHhcCcc---cccCc
Confidence 0000000 00112 2345566776433221 158999999998765321 11111
Q ss_pred CCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCH
Q psy886 584 GLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTA 663 (962)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~ 663 (962)
....+ .......+++..+.|+|.-||||++........ +.++++.+|||||.|-++....
T Consensus 559 ~v~p~-------~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~--s~k~~~aVKGAPEvi~~ml~dv----------- 618 (1160)
T KOG0209|consen 559 SVCPR-------EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGS--SEKYFVAVKGAPEVIQEMLRDV----------- 618 (1160)
T ss_pred ccCCC-------cCCCcccchhhhhhHHHHHHHHHhhhhcccCCC--ceEEEEEecCCHHHHHHHHHhC-----------
Confidence 00000 011224566788999999999999986543211 1267899999999998876432
Q ss_pred HHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCC
Q psy886 664 TLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGI 743 (962)
Q Consensus 664 ~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI 743 (962)
.....+.+.+|+ ++|.||||++||+++.-.... .....++++|+||+|.|++.|.-|+|+|++++|+.|++++.
T Consensus 619 --P~dY~~iYk~yt--R~GsRVLALg~K~l~~~~~~q--~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH 692 (1160)
T KOG0209|consen 619 --PKDYDEIYKRYT--RQGSRVLALGYKPLGDMMVSQ--VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSH 692 (1160)
T ss_pred --chhHHHHHHHHh--hccceEEEEecccccccchhh--hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCc
Confidence 234455667775 999999999999987322111 11234678899999999999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 744 RVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 744 ~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+|+||||||+.||.++|+++||..
T Consensus 693 ~vvMITGDnpLTAchVak~v~iv~ 716 (1160)
T KOG0209|consen 693 RVVMITGDNPLTACHVAKEVGIVE 716 (1160)
T ss_pred eEEEEeCCCccchheehheeeeec
Confidence 999999999999999999999964
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-53 Score=452.92 Aligned_cols=552 Identities=22% Similarity=0.291 Sum_probs=394.6
Q ss_pred HHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q psy886 41 RLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERN 120 (962)
Q Consensus 41 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 120 (962)
.+.....+..| +...|+|.|+.-+.+..+..+..++.-+...... ....+....+++++.+++..+-+...|.|
T Consensus 16 A~~~af~KL~P-~~~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~-----~~~f~~~i~~~L~fTVlFANfaEa~AEGr 89 (681)
T COG2216 16 ALKDAFKKLNP-RVLVKNPVMFVVEVGSILTTFLTIFPDLFGGTGG-----SRLFNLAITIILWFTVLFANFAEAVAEGR 89 (681)
T ss_pred HHHHHHHhcCh-HHhhhCCeEEeehHHHHHHHHHHHhhhhcCCCCc-----chhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 34444444433 3346788888877766555433333332221111 11123445566777888888999999999
Q ss_pred HHHHHHHHhccCC-CeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeec
Q psy886 121 AESAIEALKEYEP-EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKH 199 (962)
Q Consensus 121 ~~~~l~~l~~~~~-~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~ 199 (962)
.+.+..+|++.+. ..+++++++.. ++.+++.+|+.||+|.|..||.||+||.|+||.++ ||||++||||.||.|+
T Consensus 90 gKAqAdsLr~~~~~~~A~~l~~~g~-~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~as---VdESAITGESaPVire 165 (681)
T COG2216 90 GKAQADSLRKTKTETIARLLRADGS-IEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESAITGESAPVIRE 165 (681)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCC-eeeccccccccCCEEEEecCCCccCCCeEEeeeee---cchhhccCCCcceeec
Confidence 9988888888554 48888888433 89999999999999999999999999999999888 9999999999999997
Q ss_pred CCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCC
Q psy886 200 TDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVG 279 (962)
Q Consensus 200 ~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~G 279 (962)
.|.
T Consensus 166 sGg----------------------------------------------------------------------------- 168 (681)
T COG2216 166 SGG----------------------------------------------------------------------------- 168 (681)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 662
Q ss_pred CeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHH
Q psy886 280 DKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIR 359 (962)
Q Consensus 280 d~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~ 359 (962)
|-| -+-.||.|.+.+.+..+++.-.+|.+.|+.
T Consensus 169 -------------------D~s----------------------------sVtGgT~v~SD~l~irita~pG~sFlDrMI 201 (681)
T COG2216 169 -------------------DFS----------------------------SVTGGTRVLSDWLKIRITANPGETFLDRMI 201 (681)
T ss_pred -------------------Ccc----------------------------cccCCcEEeeeeEEEEEEcCCCccHHHHHH
Confidence 111 145589999999999999999999999999
Q ss_pred hhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHH
Q psy886 360 TEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVIT 439 (962)
Q Consensus 360 ~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~ 439 (962)
.+++.++.+|||-+-.++-+..-+..+.+++.+.++-+. .|.. +... .+...++|+|+.||-.....++
T Consensus 202 ~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a--~y~~---g~~~------~i~~LiALlV~LIPTTIGgLLs 270 (681)
T COG2216 202 ALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFA--IYSG---GGAA------SVTVLVALLVCLIPTTIGGLLS 270 (681)
T ss_pred HHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHH--HHcC---CCCc------CHHHHHHHHHHHhcccHHHHHH
Confidence 999999999999998888766555544333333222221 1211 1111 2445688999999999988888
Q ss_pred HHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCccee
Q psy886 440 TCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVF 519 (962)
Q Consensus 440 i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (962)
..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|-|+-.-.+++..++
T Consensus 271 AIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g------------------------- 325 (681)
T COG2216 271 AIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG------------------------- 325 (681)
T ss_pred HhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-------------------------
Confidence 7778899999999999999999999999999999999999988765555544332
Q ss_pred cCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHh
Q psy886 520 LNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVE 599 (962)
Q Consensus 520 ~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 599 (962)
.+.+.+ ..++.+++-. . ..|.-..++..|++.+.....
T Consensus 326 --------v~~~~l---a~aa~lsSl~---D----------eTpEGrSIV~LA~~~~~~~~~------------------ 363 (681)
T COG2216 326 --------VSEEEL---ADAAQLASLA---D----------ETPEGRSIVELAKKLGIELRE------------------ 363 (681)
T ss_pred --------CCHHHH---HHHHHHhhhc---c----------CCCCcccHHHHHHHhccCCCc------------------
Confidence 122333 3333333211 0 124445688888887642111
Q ss_pred hhce-eeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhc
Q psy886 600 TKWK-KEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGT 678 (962)
Q Consensus 600 ~~~~-~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 678 (962)
.... ...-+||+.+.|+..+-.. +..-+-|||.+.+.+..+. .+.. ..++ +....++.+
T Consensus 364 ~~~~~~~~fvpFtA~TRmSGvd~~----------~~~~irKGA~dai~~~v~~---~~g~--~p~~----l~~~~~~vs- 423 (681)
T COG2216 364 DDLQSHAEFVPFTAQTRMSGVDLP----------GGREIRKGAVDAIRRYVRE---RGGH--IPED----LDAAVDEVS- 423 (681)
T ss_pred ccccccceeeecceecccccccCC----------CCceeecccHHHHHHHHHh---cCCC--CCHH----HHHHHHHHH-
Confidence 0011 1234799887754333221 2255689999999987542 1111 2222 333344432
Q ss_pred ccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy886 679 GRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEA 758 (962)
Q Consensus 679 ~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~ 758 (962)
+.|=.-|+++ .|-.++|.+.+.|-++||.+|-+++||+.|||.+|+||||+.||.+
T Consensus 424 -~~GGTPL~V~-----------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~ 479 (681)
T COG2216 424 -RLGGTPLVVV-----------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA 479 (681)
T ss_pred -hcCCCceEEE-----------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHH
Confidence 3343333332 5678999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHH
Q psy886 759 ICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVA 811 (962)
Q Consensus 759 IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ 811 (962)
||++.|+.+ +|+.++.++|.+||||+||.+||++||||+.||=+|.|...+.+
T Consensus 480 IA~EAGVDdfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 480 IAAEAGVDDFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred HHHHhCchhhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceeh
Confidence 999999842 23456677899999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Q psy886 812 AVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALG 848 (962)
Q Consensus 812 ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 848 (962)
.++.|+.+.-.=-....|+++..++--+.++-+.|..
T Consensus 560 vV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~ 596 (681)
T COG2216 560 VVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAA 596 (681)
T ss_pred HhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHh
Confidence 9999999776555555666666666555555555443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=295.87 Aligned_cols=216 Identities=35% Similarity=0.542 Sum_probs=188.5
Q ss_pred hHHHHhHHHHHHHHHhcCCcc-ceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 229 VQLERNAESAIEALKEYEPEM-GKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~-a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
.+.++|+++.+++++++.+++ ++|+|+|+ ++++++++|+|||+|.+++||.+||||++++ ++.+.||||.+|||+
T Consensus 14 ~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~--~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~vd~s~ltGes 89 (230)
T PF00122_consen 14 IWQEYRSKKQLKKLNNLNPQKKVTVIRDGR--WQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAYVDESALTGES 89 (230)
T ss_dssp HHHHHHHHHHHHHHCTTSSSEEEEEEETTE--EEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEEEECHHHHSBS
T ss_pred HHHHHHHHHHHHHHhccCCCccEEEEeccc--cccchHhhccceeeeecccccccccCcccee--ccccccccccccccc
Confidence 568899999999999999998 99999997 8999999999999999999999999999996 589999999999999
Q ss_pred cceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHH
Q psy886 308 VSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVI 387 (962)
Q Consensus 308 ~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~ 387 (962)
.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|..|++.+.....+.+++++++.++++..++.+++
T Consensus 90 ~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 90 EPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp SEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 99999854 3455799999999999999999999999999999999998888888999999999999999888
Q ss_pred HHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhh
Q psy886 388 SIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 464 (962)
Q Consensus 388 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~ 464 (962)
++++++++++++.. ....+|.. .+..++++++.+||++||+++++++..++++|+++|+++|++.++|+
T Consensus 162 ~~~~~~~~~~~~~~----~~~~~~~~----~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 162 LAIAILVFIIWFFN----DSGISFFK----SFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHCHTG----STTCHCCH----HHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccchhhhccceec----cccccccc----ccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 88887777654321 12233433 57788999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-16 Score=166.05 Aligned_cols=96 Identities=38% Similarity=0.626 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-EEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecc
Q psy886 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEM-GKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYST 180 (962)
Q Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~ 180 (962)
+++++++++.+++.++++|+++.+++++++.+++ ++|+|||+ ++++++++|+|||+|.+++||++||||+|++ ++
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~--~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g 76 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGR--WQKIPSSELVPGDIIILKAGDIVPADGILLE--SG 76 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTE--EEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SS
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccc--cccchHhhccceeeeecccccccccCcccee--cc
Confidence 3567788899999999999999999999988887 99999998 8999999999999999999999999999997 46
Q ss_pred eeeeecccccCCCcceeecCC
Q psy886 181 TIRIDQSILTGESVSVIKHTD 201 (962)
Q Consensus 181 ~~~vdes~lTGEs~Pv~k~~g 201 (962)
.++||||+||||+.|+.|.+.
T Consensus 77 ~~~vd~s~ltGes~pv~k~~~ 97 (230)
T PF00122_consen 77 SAYVDESALTGESEPVKKTPL 97 (230)
T ss_dssp EEEEECHHHHSBSSEEEESSS
T ss_pred ccccccccccccccccccccc
Confidence 677999999999999999954
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-15 Score=174.61 Aligned_cols=87 Identities=28% Similarity=0.438 Sum_probs=77.6
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCc-cce-eeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPE-MGK-VIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~-~a~-ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
+..+|+| .+.|+|+++++++|+++.|+ +++ |.|||+ +++|++++|+|||+|.+++||+|||||++++| ...
T Consensus 75 ~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg~--~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG---~~~ 149 (673)
T PRK14010 75 TLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGS--YEMIDASDLKKGHIVRVATGEQIPNDGKVIKG---LAT 149 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCCE--EEEEEHHHcCCCCEEEECCCCcccCCeEEEEc---ceE
Confidence 3456776 67899999999999999997 786 678987 79999999999999999999999999999974 458
Q ss_pred EEecCCCCCCcceecc
Q psy886 298 IDQSILTGESVSVIKH 313 (962)
Q Consensus 298 VdeS~LTGEs~pv~K~ 313 (962)
||||+|||||.|+.|.
T Consensus 150 VDESaLTGES~PV~K~ 165 (673)
T PRK14010 150 VDESAITGESAPVIKE 165 (673)
T ss_pred EecchhcCCCCceecc
Confidence 9999999999999983
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.9e-15 Score=132.65 Aligned_cols=91 Identities=35% Similarity=0.577 Sum_probs=71.5
Q ss_pred hhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEE
Q psy886 541 IMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSY 620 (962)
Q Consensus 541 ~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv 620 (962)
++||++.+..+.....++..|+|+|.||+.++.+.|.... ....+..|++++++||||+||||+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~--------------~~~~~~~~~~~~~~pF~S~rK~msvv 66 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID--------------IKEIRSKYKIVAEIPFDSERKRMSVV 66 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc--------------HHHHHhhcceeEEEccCcccceeEEE
Confidence 4799998865543333448999999999999999864211 12367789999999999999999999
Q ss_pred EecCCCCCCCCCCCEEEEeCChHHHHhccccc
Q psy886 621 CTPLKSSKLGSSGPKLFVKGAPEGVLERCTHA 652 (962)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~ 652 (962)
++. + +.+.+|+|||||.||++|+++
T Consensus 67 ~~~-~------~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 67 VRN-D------GKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred EeC-C------CEEEEEcCCChHHHHHhcCCC
Confidence 981 1 146779999999999999863
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.7e-15 Score=174.38 Aligned_cols=96 Identities=40% Similarity=0.551 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecce
Q psy886 104 LLILIANAIVGVWQERNAESAIEALKE--YEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTT 181 (962)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~ 181 (962)
+++++++.+++.++++++++.+++|.+ +.|..++|+|+| +++||+++|+|||+|.+++||+|||||+|++| .
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g---~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g---~ 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG---WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG---S 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC---eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc---c
Confidence 355677889999999999999999998 889999999988 58999999999999999999999999999987 4
Q ss_pred eeeecccccCCCcceeecCCCCCC
Q psy886 182 IRIDQSILTGESVSVIKHTDAVPD 205 (962)
Q Consensus 182 ~~vdes~lTGEs~Pv~k~~g~~~~ 205 (962)
+.||||+|||||.|+.|.+|+.+.
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v~ 100 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAVF 100 (499)
T ss_pred EEEEcccccCCCCCeeeccCCccc
Confidence 559999999999999999987644
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.7e-14 Score=165.38 Aligned_cols=88 Identities=32% Similarity=0.457 Sum_probs=78.9
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCcc-ceeee-CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPEM-GKVIR-GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~~-a~ViR-~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
...+|++ .+.|+|+++.+++|+++.|+. ++|+| +|+ +++|++++|+|||+|.+++||+|||||++++| .+.
T Consensus 76 ~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~--~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG---~~~ 150 (675)
T TIGR01497 76 TVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGA--IDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG---VAS 150 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCE--EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc---cEE
Confidence 3567777 789999999999999999885 88986 675 79999999999999999999999999999964 678
Q ss_pred EEecCCCCCCcceeccC
Q psy886 298 IDQSILTGESVSVIKHT 314 (962)
Q Consensus 298 VdeS~LTGEs~pv~K~~ 314 (962)
||||+|||||.|+.|.+
T Consensus 151 VDESaLTGES~PV~K~~ 167 (675)
T TIGR01497 151 VDESAITGESAPVIKES 167 (675)
T ss_pred EEcccccCCCCceeecC
Confidence 99999999999999963
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=164.33 Aligned_cols=88 Identities=28% Similarity=0.431 Sum_probs=78.5
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCc-cceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPE-MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~-~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
+..+|++ .+.|+|+++.+++|+++.|+ +++|+|+|+. +++|++++|++||+|.+++||+|||||++++| ...|
T Consensus 75 ~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~-~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG---~a~V 150 (679)
T PRK01122 75 TVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGA-AEEVPATELRKGDIVLVEAGEIIPADGEVIEG---VASV 150 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCE-EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc---cEEE
Confidence 3456666 68999999999999999996 7999998852 68999999999999999999999999999974 5789
Q ss_pred EecCCCCCCcceecc
Q psy886 299 DQSILTGESVSVIKH 313 (962)
Q Consensus 299 deS~LTGEs~pv~K~ 313 (962)
|||+|||||.|+.|.
T Consensus 151 DESaLTGES~PV~K~ 165 (679)
T PRK01122 151 DESAITGESAPVIRE 165 (679)
T ss_pred EcccccCCCCceEeC
Confidence 999999999999983
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=163.14 Aligned_cols=96 Identities=33% Similarity=0.493 Sum_probs=84.9
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRID 299 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~Vd 299 (962)
...+|++ .+.++|+++.+++|+++.|++++|+|+|+ +++|++++|+|||+|.+++||+|||||++++ +.+.||
T Consensus 27 ~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~---g~~~vd 101 (536)
T TIGR01512 27 LFSIGETLEEYASGRARRALKALMELAPDTARVLRGGS--LEEVAVEELKVGDVVVVKPGERVPVDGVVLS---GTSTVD 101 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCE--EEEEEHHHCCCCCEEEEcCCCEeecceEEEe---CcEEEE
Confidence 3456776 67999999999999999999999999997 7999999999999999999999999999996 457899
Q ss_pred ecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeece
Q psy886 300 QSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGK 341 (962)
Q Consensus 300 eS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~ 341 (962)
||+|||||.| -....|..+..|+
T Consensus 102 es~lTGEs~p-------------------v~k~~g~~v~aGt 124 (536)
T TIGR01512 102 ESALTGESVP-------------------VEKAPGDEVFAGA 124 (536)
T ss_pred ecccCCCCCc-------------------EEeCCCCEEEeee
Confidence 9999999975 2346788888877
|
. |
| >KOG0203|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-14 Score=164.94 Aligned_cols=172 Identities=21% Similarity=0.266 Sum_probs=126.5
Q ss_pred HHhhhhhhccCccccCCCChhHH----HH---HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHH
Q psy886 42 LRLRQIDFIPARVTSLSPSENVH----IA---STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVG 114 (962)
Q Consensus 42 ~~~~~~~~g~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 114 (962)
.-.....-|+|.+..++....+. .. ...+++..+..+++.+.+..........++...++++..++++..+..
T Consensus 64 A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~ 143 (1019)
T KOG0203|consen 64 AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFS 143 (1019)
T ss_pred HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCC
Confidence 33444456788876666432222 11 334445555556555544333222233445566777777788888999
Q ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCc
Q psy886 115 VWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 194 (962)
Q Consensus 115 ~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~ 194 (962)
++|+.++.+.+++..++.|..++|+|||. ...+.+++|++||+|.++-||+||||.++++ +..++||+|+|||||+
T Consensus 144 ~~qe~ks~~im~sF~~l~P~~~~ViRdg~--k~~i~~eelVvGD~v~vk~GdrVPADiRiis--~~g~~vdnsslTGesE 219 (1019)
T KOG0203|consen 144 YYQEAKSSKIMDSFKNLVPQQALVIRDGE--KMTINAEELVVGDLVEVKGGDRVPADIRIIS--ATGCKVDNSSLTGESE 219 (1019)
T ss_pred CccchhhHHHHHHHhccchhhheeeecce--eEEechhhcccccceeeccCCcccceeEEEE--ecceeEeccccccccC
Confidence 99999999999999999999999999998 7999999999999999999999999999997 7789999999999999
Q ss_pred ceeecCCCCCCcccccCCCcccccc
Q psy886 195 SVIKHTDAVPDPRAEKNGPQMCEND 219 (962)
Q Consensus 195 Pv~k~~g~~~~~~~~~~~~~~~~~~ 219 (962)
|.++.+.-...-. ....++|.+.
T Consensus 220 P~~~~~~~t~~~~--~Et~Ni~f~s 242 (1019)
T KOG0203|consen 220 PQTRSPEFTHENP--LETRNIAFFS 242 (1019)
T ss_pred CccCCccccccCc--hhheeeeeee
Confidence 9999876443322 3344444433
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-13 Score=162.50 Aligned_cols=99 Identities=33% Similarity=0.488 Sum_probs=88.6
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
....+||| .+.++|+++.+++|.++.|++++++|+++. +++|++++|+|||+|.+++||+|||||++++ +.+.|
T Consensus 62 ~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~-~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~---g~~~v 137 (562)
T TIGR01511 62 TFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGS-IEEVPVALLQPGDIVKVLPGEKIPVDGTVIE---GESEV 137 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCe-EEEEEHHHCCCCCEEEECCCCEecCceEEEE---CceEE
Confidence 56778888 678899999999999999999999997542 6899999999999999999999999999996 45689
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
|||+|||||.|+.| ..|..|..|+.
T Consensus 138 des~lTGEs~pv~k-------------------~~gd~V~aGt~ 162 (562)
T TIGR01511 138 DESLVTGESLPVPK-------------------KVGDPVIAGTV 162 (562)
T ss_pred ehHhhcCCCCcEEc-------------------CCCCEEEeeeE
Confidence 99999999999987 67888888873
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=169.90 Aligned_cols=99 Identities=24% Similarity=0.460 Sum_probs=90.8
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.+..+||| .+.++|+.+++++|.++.|++++|+|+|+ +++|+.++|+|||+|++++||+|||||++++ +...|
T Consensus 294 ~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~--~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~---g~~~v 368 (834)
T PRK10671 294 GLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEG--EKSVPLADVQPGMLLRLTTGDRVPVDGEITQ---GEAWL 368 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCc--EEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE---ceEEE
Confidence 57789999 78999999999999999999999999987 6899999999999999999999999999996 45789
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKAR 343 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~ 343 (962)
|||+|||||.|+.| -.|..|..|+..
T Consensus 369 deS~lTGEs~pv~k-------------------~~gd~V~aGt~~ 394 (834)
T PRK10671 369 DEAMLTGEPIPQQK-------------------GEGDSVHAGTVV 394 (834)
T ss_pred eehhhcCCCCCEec-------------------CCCCEEEeccee
Confidence 99999999999987 678888888754
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-13 Score=160.04 Aligned_cols=79 Identities=32% Similarity=0.434 Sum_probs=71.4
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCC-ccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGD-KSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g-~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
....+|++ .+.++|+++.+++|.++.|++++|+|+| + +++|++++|+|||+|.+++||.|||||++++| .+.
T Consensus 26 ~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~--~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g---~~~ 100 (556)
T TIGR01525 26 FLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGS--EEEVPVEELQVGDIVIVRPGERIPVDGVVISG---ESE 100 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCe--EEEEEHHHCCCCCEEEECCCCEeccceEEEec---ceE
Confidence 34566777 6799999999999999999999999996 5 78999999999999999999999999999964 578
Q ss_pred EEecCCC
Q psy886 298 IDQSILT 304 (962)
Q Consensus 298 VdeS~LT 304 (962)
||||+||
T Consensus 101 vdes~lT 107 (556)
T TIGR01525 101 VDESALT 107 (556)
T ss_pred Eeehhcc
Confidence 9999998
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.6e-13 Score=159.16 Aligned_cols=99 Identities=36% Similarity=0.497 Sum_probs=89.2
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.+..+||| .+...|+.+++++|.++.|++|++++++.. +++|+.++|++||+|.+++||+||+||++++|+ -.|
T Consensus 182 ~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~-~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~---s~v 257 (713)
T COG2217 182 FLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGE-EEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS---SSV 257 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCc-EEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc---EEe
Confidence 57788998 889999999999999999999988886433 799999999999999999999999999999654 459
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
|||+|||||.|+.| -.|..|..|+.
T Consensus 258 DeS~iTGEs~PV~k-------------------~~Gd~V~aGti 282 (713)
T COG2217 258 DESMLTGESLPVEK-------------------KPGDEVFAGTV 282 (713)
T ss_pred ecchhhCCCCCEec-------------------CCCCEEeeeEE
Confidence 99999999999987 78889988874
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.6e-13 Score=164.80 Aligned_cols=98 Identities=30% Similarity=0.432 Sum_probs=86.8
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
....+|++ .+.++|+++.+++|.++.|++++|+|+|+ +++|++++|+|||+|++++||+|||||++++| ...|
T Consensus 214 ~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~--~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g---~~~v 288 (741)
T PRK11033 214 LLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGE--REEVAIADLRPGDVIEVAAGGRLPADGKLLSP---FASF 288 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEecceEEEEC---cEEe
Confidence 56678888 78999999999999999999999999997 78999999999999999999999999999964 5689
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
|||+|||||.| -....|..|..|+.
T Consensus 289 des~lTGEs~P-------------------v~k~~Gd~V~aGt~ 313 (741)
T PRK11033 289 DESALTGESIP-------------------VERATGEKVPAGAT 313 (741)
T ss_pred ecccccCCCCC-------------------EecCCCCeeccCCE
Confidence 99999999975 22466888888763
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.7e-12 Score=132.61 Aligned_cols=53 Identities=42% Similarity=0.815 Sum_probs=51.7
Q ss_pred CeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 714 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 714 ~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.++|.+.+.||||++++++|+.|+++||+++|+|||+..+|.++|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~ 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc
Confidence 78999999999999999999999999999999999999999999999999994
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=99.33 E-value=2e-12 Score=163.00 Aligned_cols=124 Identities=26% Similarity=0.366 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEEC
Q psy886 62 NVHIASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRG 141 (962)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~ 141 (962)
.....+..++++++++++++..|.. ... .++++++-.+-.+++.+...|+-++++++........|=-+.
T Consensus 59 q~~~~~~~iL~~aails~~~~~~~~---------~~i-Il~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~ 128 (1053)
T TIGR01523 59 QVCNAMCMVLIIAAAISFAMHDWIE---------GGV-ISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS 128 (1053)
T ss_pred HHhCHHHHHHHHHHHHHHHHhhHHH---------HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee
Confidence 3334456777777788877766532 133 334444444445666667778888999988877766664444
Q ss_pred CCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCC
Q psy886 142 DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDA 202 (962)
Q Consensus 142 ~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~ 202 (962)
-.. +++||||||+|.|++||+|||||+|++ +.++.||||+|||||.||.|.+..
T Consensus 129 ~~I-----~a~eLVpGDIv~L~~Gd~VPAD~rLi~--~~~L~VDES~LTGES~pV~K~~~~ 182 (1053)
T TIGR01523 129 DAI-----DSHDLVPGDICLLKTGDTIPADLRLIE--TKNFDTDEALLTGESLPVIKDAHA 182 (1053)
T ss_pred eec-----CHhhCCCCCEEEECCCCEeeccEEEEE--eCceEEEchhhcCCCCceeccccc
Confidence 343 678999999999999999999999998 567999999999999999998753
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0207|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-12 Score=151.09 Aligned_cols=100 Identities=28% Similarity=0.428 Sum_probs=92.6
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
.++.+||| .+..+|+..++..|..+.|.+|.++.+|++ +++|+.+.|.+||+|.+.+|++||+||++++ |+.+|
T Consensus 349 ~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~-e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~---Gss~V 424 (951)
T KOG0207|consen 349 TFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSE-EKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD---GSSEV 424 (951)
T ss_pred HHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCc-ceEeeeeeeccCCEEEECCCCccccccEEEe---Cceee
Confidence 57889999 889999999999999999999999999975 6899999999999999999999999999996 45679
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEE
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKAR 343 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~ 343 (962)
|||.+|||++||.| -.|+.|..|+.-
T Consensus 425 DEs~iTGEs~PV~K-------------------k~gs~ViaGsiN 450 (951)
T KOG0207|consen 425 DESLITGESMPVPK-------------------KKGSTVIAGSIN 450 (951)
T ss_pred chhhccCCceeccc-------------------CCCCeeeeeeec
Confidence 99999999999988 899999999743
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-12 Score=161.49 Aligned_cols=114 Identities=19% Similarity=0.251 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeE-----EEE
Q psy886 65 IASTNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMG-----KVI 139 (962)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-----~v~ 139 (962)
.....+++++++++++++.|... ....+++++.. +..+++.+...++-+++.++........ ..+
T Consensus 61 ~~~~~~L~~aa~ls~~~g~~~~~---------~~i~~~i~~~~-~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I 130 (884)
T TIGR01522 61 NPLILLLIASAVISVFMGNIDDA---------VSITLAILIVV-TVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHV 130 (884)
T ss_pred ChHHHHHHHHHHHHHHHcchhhH---------HHHHhHHHHHH-HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEE
Confidence 34466677777777777777432 33334444444 4445566677788888888754433222 222
Q ss_pred E-----CCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCC
Q psy886 140 R-----GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPD 205 (962)
Q Consensus 140 r-----~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~ 205 (962)
. -|. ...+...|..|-|.++++..+ +.||||+|||||.|+.|.+++.+.
T Consensus 131 ~~~eLv~GD--iv~l~~Gd~IPaDg~ii~g~~---------------l~VDES~LTGES~pv~K~~~~~~~ 184 (884)
T TIGR01522 131 LASTLVPGD--LVCLSVGDRVPADLRIVEAVD---------------LSIDESNLTGETTPVSKVTAPIPA 184 (884)
T ss_pred EHHHCccCC--EEEecCCCEEeeeEEEEEcCc---------------eEEEcccccCCCcceecccccccc
Confidence 1 244 688888999999999997643 229999999999999999986543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0208|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.4e-11 Score=143.73 Aligned_cols=81 Identities=32% Similarity=0.376 Sum_probs=69.1
Q ss_pred HHHhHHHHHHHHHhcCCc--cceeeeCCccceeeecccccCCCCEEEeCC-CCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 231 LERNAESAIEALKEYEPE--MGKVIRGDKSGVQKVRAKEIVPGDIVEVSV-GDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 231 ~e~ra~~~l~~L~~~~~~--~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~-Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
+-|..++.-..|++|... .++|+|+|. |++|.++|||||||+++.+ |-..|||++|+ +++|.||||+|||||
T Consensus 231 sv~e~r~qs~rlr~mv~~~~~V~V~R~g~--~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTGES 305 (1140)
T KOG0208|consen 231 SVYETRKQSIRLRSMVKFTCPVTVIRDGF--WETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTGES 305 (1140)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEECCE--EEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccCCc
Confidence 444455555566666654 578999987 8999999999999999998 99999999999 678999999999999
Q ss_pred cceeccCCC
Q psy886 308 VSVIKHTDA 316 (962)
Q Consensus 308 ~pv~K~~~~ 316 (962)
.|+.|.+.+
T Consensus 306 VPv~K~~l~ 314 (1140)
T KOG0208|consen 306 VPVTKTPLP 314 (1140)
T ss_pred ccccccCCc
Confidence 999999865
|
|
| >KOG0202|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-12 Score=149.28 Aligned_cols=92 Identities=45% Similarity=0.629 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeee
Q psy886 106 ILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRID 185 (962)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vd 185 (962)
+.....+.+.+...|+-++|++|..-..+..|--+-.. +++.||||||||.|+-||+||||-+|++ ..++.||
T Consensus 90 ~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~-----i~A~eLVPGDiV~l~vGDkVPADlRl~e--~~sl~iD 162 (972)
T KOG0202|consen 90 INVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQH-----ILARELVPGDIVELKVGDKIPADLRLIE--AKSLRID 162 (972)
T ss_pred eeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccc-----eehhccCCCCEEEEecCCccccceeEEe--eeeeeee
Confidence 33334466666777899999999887777777777777 7999999999999999999999999998 6669999
Q ss_pred cccccCCCcceeecCCCCC
Q psy886 186 QSILTGESVSVIKHTDAVP 204 (962)
Q Consensus 186 es~lTGEs~Pv~k~~g~~~ 204 (962)
||+|||||.||.|.....+
T Consensus 163 eS~LTGEs~pv~K~t~~v~ 181 (972)
T KOG0202|consen 163 ESSLTGESEPVSKDTDAVP 181 (972)
T ss_pred cccccCCcccccccCcccc
Confidence 9999999999999887766
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.2e-11 Score=149.86 Aligned_cols=211 Identities=15% Similarity=0.140 Sum_probs=126.2
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeC-CccceeeecccccCCCCEEEeCCCCeecceEEEEeecC--CeEEEEecCCCC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRG-DKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTG 305 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~-g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~--~~l~VdeS~LTG 305 (962)
...+++..++-. +..++.++|+|+ |+ +++++|+||+|||+|++++||+||||+++++++. +.+.||||+|||
T Consensus 69 ~~ed~~r~~~d~---~~n~~~~~v~~~~~~--~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~G 143 (1057)
T TIGR01652 69 AIEDIRRRRRDK---EVNNRLTEVLEGHGQ--FVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDG 143 (1057)
T ss_pred HHHHHHHHHhHH---HHhCcEEEEECCCCc--EEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCC
Confidence 334444444433 356789999997 55 8999999999999999999999999999997543 669999999999
Q ss_pred CCcceeccCCCCCCCc--------------cCCCCCcceEecCceeeec-eE----------EE-EEE----Eeccchhh
Q psy886 306 ESVSVIKHTDAVPDPR--------------AVNQDKKNILFSGTNVAAG-KA----------RG-IVM----GTGLNTAI 355 (962)
Q Consensus 306 Es~pv~K~~~~~~~~~--------------~~~~~~~n~v~aGT~v~~G-~~----------~~-vV~----~tG~~T~~ 355 (962)
||.|+.|.+.+..... ....+.+-..|.|+....+ .. +| .|. ..|.-..-
T Consensus 144 Es~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyT 223 (1057)
T TIGR01652 144 ETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYT 223 (1057)
T ss_pred eecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEE
Confidence 9999999864321100 0001112246888887655 10 11 222 23444445
Q ss_pred HHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHH-----------HHHHHHHH
Q psy886 356 GKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAV-----------YYFKIAVA 424 (962)
Q Consensus 356 gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~~i~ 424 (962)
|+=.+........+.+ ...+++....++.+++++.+++.++....... .........+. ..+...+.
T Consensus 224 G~~Tk~~~n~~~~~~k-~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 301 (1057)
T TIGR01652 224 GHDTKLMRNATQAPSK-RSRLEKELNFLIIILFCLLFVLCLISSVGAGI-WNDAHGKDLWYIRLDVSERNAAANGFFSFL 301 (1057)
T ss_pred chhhhhhhcCCCCccc-ccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh-eecccCCCccceecCcccccchhHHHHHHH
Confidence 6666665544333222 34677777777666665555554443221110 11111111110 11233455
Q ss_pred HHHhhcCCchHHHHHHHHHHHH
Q psy886 425 LAVAAIPEGLPAVITTCLALGT 446 (962)
Q Consensus 425 l~v~~iP~~Lp~~v~i~l~~~~ 446 (962)
.++...+..+|..+.+++.+..
T Consensus 302 ~~~~L~~~~IPisL~v~l~l~~ 323 (1057)
T TIGR01652 302 TFLILFSSLIPISLYVSLELVK 323 (1057)
T ss_pred HHHHHHhhhcceeeeehHHHHH
Confidence 5666677777777777776663
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.8e-11 Score=148.31 Aligned_cols=94 Identities=30% Similarity=0.450 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE--ECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeec
Q psy886 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI--RGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS 179 (962)
Q Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~--r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~ 179 (962)
++++-.+ ..+.+.++..++-++++++.+......|-- ..-. ++||+|||+|.+++||+||||++|+++++
T Consensus 112 ~i~~n~~-~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~-------a~eLVpGDiV~l~~gd~vPAD~rLl~~~~ 183 (917)
T COG0474 112 VVVINAL-LGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIP-------ASELVPGDIVLLEAGDVVPADLRLLESSD 183 (917)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEec-------HHHCCCCcEEEECCCCccccceEEEEecC
Confidence 3333333 348888899999999998877665544411 1111 25899999999999999999999999655
Q ss_pred ceeeeecccccCCCcceeecCCCCCC
Q psy886 180 TTIRIDQSILTGESVSVIKHTDAVPD 205 (962)
Q Consensus 180 ~~~~vdes~lTGEs~Pv~k~~g~~~~ 205 (962)
++||||+|||||.|++|.+.....
T Consensus 184 --l~VdEs~LTGES~pv~K~~~~~~~ 207 (917)
T COG0474 184 --LEVDESALTGESLPVEKQALPLTK 207 (917)
T ss_pred --ceEEcccccCCCcchhcccccccc
Confidence 689999999999999999875543
|
|
| >KOG0205|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=4e-11 Score=133.73 Aligned_cols=97 Identities=33% Similarity=0.401 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecc
Q psy886 101 FVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYST 180 (962)
Q Consensus 101 ~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~ 180 (962)
+.++++=..-.+++.++...+-.++.+-........+--+=++. +- ++||||||+.++.|+.|||||+|++|.
T Consensus 104 ~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~-eA----s~lVPGDIlsik~GdIiPaDaRLl~gD-- 176 (942)
T KOG0205|consen 104 CCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQ-EA----SILVPGDILSIKLGDIIPADARLLEGD-- 176 (942)
T ss_pred heeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeee-ec----cccccCceeeeccCCEecCccceecCC--
Confidence 33333333333556666666666666554545544443322221 11 469999999999999999999999975
Q ss_pred eeeeecccccCCCcceeecCCCCC
Q psy886 181 TIRIDQSILTGESVSVIKHTDAVP 204 (962)
Q Consensus 181 ~~~vdes~lTGEs~Pv~k~~g~~~ 204 (962)
.++||||+|||||.||.|.+||.-
T Consensus 177 ~LkiDQSAlTGESLpvtKh~gd~v 200 (942)
T KOG0205|consen 177 PLKIDQSALTGESLPVTKHPGDEV 200 (942)
T ss_pred ccccchhhhcCCccccccCCCCce
Confidence 799999999999999999999853
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=99.09 E-value=2e-10 Score=145.31 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----eEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceE
Q psy886 100 PFVILLILIANAIVGVWQERNAESAIEALKEYEPE-----MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 174 (962)
Q Consensus 100 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-----~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v 174 (962)
.++++++-.+-.+.+.++.+++.+++.++...... ....+.-.. .+.=+.=.|.+||+ |||||+|
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~--lv~GDiv~l~~Gd~--------IPaD~~i 179 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQ--VVVGDLVEVKGGDR--------IPADLRI 179 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHH--CCCCCEEEECCCCE--------EeeeEEE
Confidence 34444445555666777788888888877443222 111211111 00001123457885 6999999
Q ss_pred EeeecceeeeecccccCCCcceeecCCC
Q psy886 175 IKIYSTTIRIDQSILTGESVSVIKHTDA 202 (962)
Q Consensus 175 ~~G~~~~~~vdes~lTGEs~Pv~k~~g~ 202 (962)
++|. .+.||||+|||||.|+.|.+++
T Consensus 180 l~~~--~l~VdeS~LTGES~pv~K~~~~ 205 (997)
T TIGR01106 180 ISAQ--GCKVDNSSLTGESEPQTRSPEF 205 (997)
T ss_pred EEcc--CcEEEccccCCCCCceeccCCC
Confidence 9853 4779999999999999998874
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=138.15 Aligned_cols=150 Identities=18% Similarity=0.253 Sum_probs=97.7
Q ss_pred cCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecC--CeEEEEecCCCCCCcceeccCCCCCC---
Q psy886 245 YEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYS--TTIRIDQSILTGESVSVIKHTDAVPD--- 319 (962)
Q Consensus 245 ~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~--~~l~VdeS~LTGEs~pv~K~~~~~~~--- 319 (962)
..+..++|+|+|+ +++++|++|+|||+|++++||++|||+++++++. +.++||||+|||||.|+.|.+.....
T Consensus 168 ~N~~~~~v~~~~~--~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~ 245 (1178)
T PLN03190 168 ENNRLAWVLVDDQ--FQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKI 245 (1178)
T ss_pred hcCcEEEEEECCe--EEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcc
Confidence 3567899999987 7899999999999999999999999999997543 67999999999999999998653211
Q ss_pred -Cc----------cC----CCCCcceEecCceeeece----EEEEE-----EEeccchhhHHHHhhccccccCCCchHHH
Q psy886 320 -PR----------AV----NQDKKNILFSGTNVAAGK----ARGIV-----MGTGLNTAIGKIRTEMSETEEIKTPLQQK 375 (962)
Q Consensus 320 -~~----------~~----~~~~~n~v~aGT~v~~G~----~~~vV-----~~tG~~T~~gki~~~~~~~~~~~tplq~~ 375 (962)
.. .+ ....+++.+.|+.+.-|. .+|.+ -..|--..-|+=.+.+......+. -...
T Consensus 246 ~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~-K~S~ 324 (1178)
T PLN03190 246 PEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPS-KRSR 324 (1178)
T ss_pred hhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCC-CccH
Confidence 00 00 112234444444332221 11111 124444455766665555444333 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy886 376 LDEFGEQLSKVISIICVAVWAI 397 (962)
Q Consensus 376 l~~~~~~l~~~~~~~~~~~~~i 397 (962)
+++....++.+++++.+++.++
T Consensus 325 le~~~N~~vi~l~~i~~~l~~i 346 (1178)
T PLN03190 325 LETRMNLEIIILSLFLIALCTI 346 (1178)
T ss_pred HHHHHhHHHHHHHHHHHHHHHH
Confidence 7777777776655555544444
|
|
| >KOG4383|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=5.5e-07 Score=101.16 Aligned_cols=238 Identities=19% Similarity=0.256 Sum_probs=166.9
Q ss_pred CChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCC---------------CCccc-----
Q psy886 640 GAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNP---------------LKPED----- 699 (962)
Q Consensus 640 GA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~---------------~~~~~----- 699 (962)
|-.+.+.+.|++.+.+.+..|++...|.++.+.+..-. -.=.|+|||||+.. ..++.
T Consensus 698 g~ad~~~eACTdfWdGadi~PlSg~dkkkV~DFY~Rac---lsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T 774 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGADIIPLSGRDKKKVKDFYLRAC---LSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIET 774 (1354)
T ss_pred cHHHHHHHHhhhhcCCceeeecCcchHHHHHHHHHHHh---hcccchheecccHHHHHHHHhCCceEEeccCcccchhhh
Confidence 55678889999999999999999999999988876643 23358999998521 11100
Q ss_pred -----------------ccccc--------ccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHH
Q psy886 700 -----------------MNLAD--------STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKA 754 (962)
Q Consensus 700 -----------------~~~~~--------~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~ 754 (962)
.+..+ .+.....-.+-.|.|++...-++|++....|+.|-+|-||.+-.+-.+..
T Consensus 775 ~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdEL 854 (1354)
T KOG4383|consen 775 ACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDEL 854 (1354)
T ss_pred hccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHH
Confidence 00000 00011122567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC---------CccccCCC-------------------------------C-----------------
Q psy886 755 TAEAICRRIGVFTE---------EEDTTGKS-------------------------------Y----------------- 777 (962)
Q Consensus 755 TA~~IA~~~GI~~~---------~~~~~g~~-------------------------------l----------------- 777 (962)
..+-.|.++||-.+ ++..-|.+ +
T Consensus 855 kSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds 934 (1354)
T KOG4383|consen 855 KSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS 934 (1354)
T ss_pred HHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc
Confidence 99999999999431 11110000 0
Q ss_pred ---------------------------------------------------------------------------CcCcE
Q psy886 778 ---------------------------------------------------------------------------SKAEI 782 (962)
Q Consensus 778 ---------------------------------------------------------------------------~~AdV 782 (962)
.+|||
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccce
Confidence 18999
Q ss_pred EEecc--------------ChhHHHHhh-----------------cccccccCChhHHHHHHHHhHHHHHHHHHHHHHHH
Q psy886 783 GIAMG--------------SGTAVAKSA-----------------SEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLI 831 (962)
Q Consensus 783 GIAmg--------------~gtdvAkea-----------------ADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l 831 (962)
+||+- ..+---.+| .|.-+-...+-+|...|+.+|....-+|+.+.|.|
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99862 111111122 23333334456889999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHhCCCccchhHH-HhhC--cccccccc---cCCCCcCccch
Q psy886 832 SSNIGEVVSIFLTAALGLPEALIKKI-STTN--RGKKKKLS---YNFLDISLLGP 880 (962)
Q Consensus 832 ~~ni~~~~~~~~~~~~~~~~pl~~~q-L~~d--~~~a~al~---~e~~~~~~m~~ 880 (962)
-......++++++.++.+|..|+-.| +.+. -.|-+.++ ..+|.+.+|.+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 99999999999999999998888877 3111 23334433 45666666544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.9e-09 Score=116.61 Aligned_cols=81 Identities=32% Similarity=0.541 Sum_probs=67.7
Q ss_pred HHHHhHHHHHHHHHhcCCc-cceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 230 QLERNAESAIEALKEYEPE-MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~~-~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
..|.|.+..-++|++.... .++++++.. +++.+++.+|+.||+|++++||.||+||.+++| ...||||++||||.
T Consensus 85 ~AEGrgKAqAdsLr~~~~~~~A~~l~~~g-~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG---~asVdESAITGESa 160 (681)
T COG2216 85 VAEGRGKAQADSLRKTKTETIARLLRADG-SIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG---VASVDESAITGESA 160 (681)
T ss_pred HHcccchHHHHHHHHHHHHHHHHHhcCCC-CeeeccccccccCCEEEEecCCCccCCCeEEee---eeecchhhccCCCc
Confidence 3566666667777776654 578888753 389999999999999999999999999999975 45699999999999
Q ss_pred ceeccC
Q psy886 309 SVIKHT 314 (962)
Q Consensus 309 pv~K~~ 314 (962)
||.|.+
T Consensus 161 PVires 166 (681)
T COG2216 161 PVIRES 166 (681)
T ss_pred ceeecc
Confidence 999975
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.2e-09 Score=105.53 Aligned_cols=95 Identities=18% Similarity=0.133 Sum_probs=55.6
Q ss_pred CccchhHH-H----hhCcccccccccCCCCcCccchh-------H-----HHHHHHHhhhHHhhhcCCCcEEEeccchhh
Q psy886 850 PEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA-------I-----HYQVDLTGGPDQVYLSGLPDSIYYLPTTVF 912 (962)
Q Consensus 850 ~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (962)
|.||+|+| | ++|.+||++|++||||+++|+|| + +.+.+..|...++.. ...|. .
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~----~~~f~-----~ 71 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAAC----FFAFF-----L 71 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHH----HHHHH-----H
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHH----HHHHH-----H
Confidence 78999999 4 99999999999999999999987 2 333322233221110 00010 0
Q ss_pred hhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 913 ATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
..+.+ +.+... ......+++|++|++++++|++|++++|+.
T Consensus 72 ~~~~~---~~~~~~-----~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~ 112 (182)
T PF00689_consen 72 GLYIF---GWDEET-----NNDNLAQAQTMAFTALVLSQLFNAFNCRSR 112 (182)
T ss_dssp HHHST---CSSSHH-----HTTCHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred Hhhcc---cccccc-----chhHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 00000 000000 000133589999999999999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG0209|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.4e-08 Score=113.58 Aligned_cols=78 Identities=24% Similarity=0.457 Sum_probs=66.2
Q ss_pred HHHHHHHHHhcCC--ccceeeeCCccceeeecccccCCCCEEEeCC---CCeecceEEEEeecCCeEEEEecCCCCCCcc
Q psy886 235 AESAIEALKEYEP--EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSV---GDKIPADIRLIKIYSTTIRIDQSILTGESVS 309 (962)
Q Consensus 235 a~~~l~~L~~~~~--~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~---Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~p 309 (962)
.-+.+..+++|.. ....|+|+++ |+.+.++||.|||+|.+.. ...||||.+|+ .|+|.||||+|||||.|
T Consensus 238 rm~~lse~R~Mg~kpy~I~v~R~kK--W~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL---~GsciVnEaMLtGESvP 312 (1160)
T KOG0209|consen 238 RMRTLSEFRTMGNKPYTINVYRNKK--WVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL---RGSCIVNEAMLTGESVP 312 (1160)
T ss_pred HHHHHHHHHhcCCCceEEEEEecCc--ceeccccccCCCceEEeccCcccCcCCceEEEE---ecceeechhhhcCCCcc
Confidence 4456666777654 4678999987 9999999999999999987 56899999999 46889999999999999
Q ss_pred eeccCCCC
Q psy886 310 VIKHTDAV 317 (962)
Q Consensus 310 v~K~~~~~ 317 (962)
..|.+...
T Consensus 313 l~KE~Ie~ 320 (1160)
T KOG0209|consen 313 LMKESIEL 320 (1160)
T ss_pred cccccccc
Confidence 99987544
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.3e-07 Score=115.66 Aligned_cols=118 Identities=49% Similarity=0.684 Sum_probs=92.1
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
.+.|+|+++++++|+++.|++++|+|||+ +++|++++|||||+|.+++||+|||||+++++ .++.||||+|||||.
T Consensus 54 ~~qe~~a~~~~~~L~~~~~~~~~ViRdg~--~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~--~~l~VdeS~LTGES~ 129 (917)
T TIGR01116 54 VWQERNAEKAIEALKEYESEHAKVLRDGR--WSVIKAKDLVPGDIVELAVGDKVPADIRVLSL--KTLRVDQSILTGESV 129 (917)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEECCE--EEEEEHHHCCCCCEEEECCCCEeeccEEEEEe--cceEEEcccccCCCC
Confidence 67899999999999999999999999997 79999999999999999999999999999973 479999999999999
Q ss_pred ceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhH
Q psy886 309 SVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIG 356 (962)
Q Consensus 309 pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~g 356 (962)
|+.|.++ ....+.....-+...+..|+...--...|.-+..|
T Consensus 130 pv~K~~~------~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG 171 (917)
T TIGR01116 130 SVNKHTE------SVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTG 171 (917)
T ss_pred ccccccc------ccCccccCcccccceeeeCCEEecceEEEEEEEeC
Confidence 9999753 11111122223345667777443333344444334
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.2e-07 Score=112.22 Aligned_cols=188 Identities=22% Similarity=0.304 Sum_probs=112.1
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
...|+|+++++++|+++.|++++|+|||+ +++|+++||||||+|.+++||+|||||+++ + |+..
T Consensus 73 ~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~--~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi---------~-----g~~~ 136 (755)
T TIGR01647 73 FIEENKAGNAVEALKQSLAPKARVLRDGK--WQEIPASELVPGDVVRLKIGDIVPADCRLF---------E-----GDYI 136 (755)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEECCE--EEEEEhhhCcCCCEEEECCCCEEeceEEEE---------e-----cCce
Confidence 67899999999999999999999999997 799999999999999999999999999996 2 3322
Q ss_pred ceeccCCCCCCCccCCCCCcc-eEecCceeeeceEEEEEEEeccchhhHHH---HhhccccccCCCchHHHHHHHHHHHH
Q psy886 309 SVIKHTDAVPDPRAVNQDKKN-ILFSGTNVAAGKARGIVMGTGLNTAIGKI---RTEMSETEEIKTPLQQKLDEFGEQLS 384 (962)
Q Consensus 309 pv~K~~~~~~~~~~~~~~~~n-~v~aGT~v~~G~~~~vV~~tG~~T~~gki---~~~~~~~~~~~tplq~~l~~~~~~l~ 384 (962)
-+.-+. .-++... .-..|..+..|+...-=..++.-+..|.- .+..+..+..+. -...+.+....+.
T Consensus 137 ~VDeS~--------LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~-~~~~lq~~~~~i~ 207 (755)
T TIGR01647 137 QVDQAA--------LTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTET-GSGHLQKILSKIG 207 (755)
T ss_pred EEEccc--------ccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCC-CCCcHHHHHHHHH
Confidence 221111 0111111 12467778888754333333333333321 111111112111 1224566666665
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q psy886 385 KVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMA 450 (962)
Q Consensus 385 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~ 450 (962)
...+.+.+++.++.+.. |.......+..++...++..-.+.|.+++++...+...-.
T Consensus 208 ~~~~~~~~~~~~i~~~~---------~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~ 264 (755)
T TIGR01647 208 LFLIVLIGVLVLIELVV---------LFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGA 264 (755)
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHH
Confidence 55444444333332110 0000001244566666677777788888888877765443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=7e-07 Score=111.77 Aligned_cols=117 Identities=27% Similarity=0.380 Sum_probs=90.7
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCc----cceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 304 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~----~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LT 304 (962)
.+.|+||++++++|+++.|++++|+|+|+ +++++|++++|||||+|.+++||+|||||+|++ +.++.||||+||
T Consensus 140 ~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~--g~~l~VDES~LT 217 (902)
T PRK10517 140 FIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQ--ARDLFVAQASLT 217 (902)
T ss_pred HHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEE--cCceEEEecCcC
Confidence 57899999999999999999999999953 347999999999999999999999999999997 456899999999
Q ss_pred CCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 305 GESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 305 GEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
|||.|+.|. +. ....+..+..-++..+..|+...-=...+.-+
T Consensus 218 GES~PV~K~----~~--~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~ 260 (902)
T PRK10517 218 GESLPVEKF----AT--TRQPEHSNPLECDTLCFMGTNVVSGTAQAVVI 260 (902)
T ss_pred CCCCceecc----cc--cccccccCccccccceeeCceEeeeeEEEEEE
Confidence 999999994 11 11112233444555677777443333334333
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.3e-06 Score=109.49 Aligned_cols=118 Identities=32% Similarity=0.403 Sum_probs=94.9
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeee------CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIR------GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSI 302 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR------~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~ 302 (962)
.+.|+|+++++++|+++.+++++|+| ||+ +++|+++||||||+|.+++||+|||||++++ +.++.||||+
T Consensus 106 ~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~--~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~--g~~l~VDES~ 181 (867)
T TIGR01524 106 FIQESRAERAAYALKNMVKNTATVLRVINENGNGS--MDEVPIDALVPGDLIELAAGDIIPADARVIS--ARDLFINQSA 181 (867)
T ss_pred HHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCe--EEEEEhhcCCCCCEEEECCCCEEcccEEEEe--cCceEEEccc
Confidence 57899999999999999999999999 776 7999999999999999999999999999997 4468999999
Q ss_pred CCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhH
Q psy886 303 LTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIG 356 (962)
Q Consensus 303 LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~g 356 (962)
|||||.|+.|.++ ....+..+..-++..+..|+...-=...+.-+..|
T Consensus 182 LTGES~PV~K~~~------~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG 229 (867)
T TIGR01524 182 LTGESLPVEKFVE------DKRARDPEILERENLCFMGTNVLSGHAQAVVLATG 229 (867)
T ss_pred ccCCCCcccccCC------ccccccccccccccceecCCeEEEeEEEEEEEEEc
Confidence 9999999999864 11123345566677788887544333344444333
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.8e-07 Score=115.48 Aligned_cols=123 Identities=33% Similarity=0.414 Sum_probs=95.3
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCc----cceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCC
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDK----SGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILT 304 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~----~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LT 304 (962)
...|+|+++++++|+++.+++++|+|+|+ +++++|++++|||||+|.+++||+|||||++++ +.++.||||+||
T Consensus 129 ~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~--g~~l~VDES~LT 206 (903)
T PRK15122 129 FWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIE--SRDLFISQAVLT 206 (903)
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE--cCceEEEccccC
Confidence 67899999999999999999999999962 247999999999999999999999999999997 456899999999
Q ss_pred CCCcceeccCC--CCCC--CccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 305 GESVSVIKHTD--AVPD--PRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 305 GEs~pv~K~~~--~~~~--~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
|||.|+.|.+. .... ......+..+..-++..+..|+...-=...+.-+
T Consensus 207 GES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~ 259 (903)
T PRK15122 207 GEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVV 259 (903)
T ss_pred CCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEE
Confidence 99999999862 1110 1111223445666778888887443323333333
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.7e-06 Score=104.36 Aligned_cols=225 Identities=17% Similarity=0.193 Sum_probs=133.6
Q ss_pred HHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeC--CCCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 230 QLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVS--VGDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~--~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
+.++|+.+.+.++.. .++.++|+|||+ +++|+++||||||+|.++ +||+||||++|++ +++.||||+|||||
T Consensus 212 ~~~~k~~~~L~~~~~-~~~~v~V~Rdg~--~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LTGES 285 (1054)
T TIGR01657 212 YQIRKQMQRLRDMVH-KPQSVIVIRNGK--WVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLTGES 285 (1054)
T ss_pred HHHHHHHHHHHHhhc-CCeeEEEEECCE--EEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEecccccCCc
Confidence 456666666666544 367899999997 899999999999999999 9999999999996 47999999999999
Q ss_pred cceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEe-ccchhhHHHH---------hhccccccCCCchHHHHH
Q psy886 308 VSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGT-GLNTAIGKIR---------TEMSETEEIKTPLQQKLD 377 (962)
Q Consensus 308 ~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~t-G~~T~~gki~---------~~~~~~~~~~tplq~~l~ 377 (962)
.|+.|.+.+.......... ..-..++..+-.|+....+... |..+..|... +..+.. ....+....++
T Consensus 286 ~Pv~K~~~~~~~~~~~~~~-~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i-~~~~~~~~~~~ 363 (1054)
T TIGR01657 286 VPVLKFPIPDNGDDDEDLF-LYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI-LYPKPRVFKFY 363 (1054)
T ss_pred cceecccCCcccccccccc-ccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHh-hCCCCCCCchH
Confidence 9999987532111000000 0012345567777755433221 1111111111 111111 12233344555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHH--HHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCc
Q psy886 378 EFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAV--YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAI 455 (962)
Q Consensus 378 ~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~il 455 (962)
+-...+..++++++++.+++.+ ..... ..+...+...+..+=...|..+++++..+....
T Consensus 364 ~~~~~~~~~l~~~a~i~~i~~~------------~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~------ 425 (1054)
T TIGR01657 364 KDSFKFILFLAVLALIGFIYTI------------IELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNS------ 425 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------------HHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHH------
Confidence 5555555555544444433311 11110 112233444455556667888888888886543
Q ss_pred cCCchhhhhcCCeeEEEecCCCcccCCceEE
Q psy886 456 VRSLPSVETLGCTSVICSDKTGTLTTNQMSV 486 (962)
Q Consensus 456 vr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v 486 (962)
.-.|.+-.++|.+-.---|-|+.++
T Consensus 426 ------~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 426 ------LARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred ------HHHHHHCCEEEcCcccceecceeeE
Confidence 3334455678877777667777655
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.16 E-value=2e-06 Score=109.13 Aligned_cols=58 Identities=33% Similarity=0.445 Sum_probs=53.9
Q ss_pred hHHHHhHHHHHHHHHhc-CCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEE
Q psy886 229 VQLERNAESAIEALKEY-EPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~-~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~l 288 (962)
...|+++++++++|++. .+++++|+|||+ +++|++++|||||+|.+++||+|||||++
T Consensus 146 ~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~--~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~l 204 (941)
T TIGR01517 146 AVNDYKKELQFRQLNREKSAQKIAVIRGGQ--EQQISIHDIVVGDIVSLSTGDVVPADGVF 204 (941)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEECCE--EEEEeHHHCCCCCEEEECCCCEecccEEE
Confidence 56899999999999875 578999999997 79999999999999999999999999988
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204|consensus | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00013 Score=85.50 Aligned_cols=55 Identities=31% Similarity=0.471 Sum_probs=47.8
Q ss_pred HHHHhHHHHHHHHHhcCC-ccceeeeCCccceeeecccccCCCCEEEeCCCCeecceE
Q psy886 230 QLERNAESAIEALKEYEP-EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286 (962)
Q Consensus 230 ~~e~ra~~~l~~L~~~~~-~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~ 286 (962)
..+||.++....|.+... .+..|+|+|+ .++|+..|||||||+.++.||.+||||
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~ViR~G~--r~~isI~diVVGDIv~lk~GDqvPADG 256 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVIRGGR--RQQISIYDLVVGDIVQLKIGDQVPADG 256 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEEECCE--EEEEEEeeeeeccEEEeecCCccccce
Confidence 468888888888865544 4678999998 699999999999999999999999997
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0017 Score=68.04 Aligned_cols=86 Identities=17% Similarity=0.332 Sum_probs=69.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Cccc----c-----C--CC----------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDT----T-----G--KS---------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~----~-----g--~~---------- 776 (962)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- ++.. . + +.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 164 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKE 164 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHHc
Confidence 5899999999999999999999999999999999999997420 0000 0 0 00
Q ss_pred -------------------CCcCcEEEeccChhHHHHhhcccccccCChhHHHHH
Q psy886 777 -------------------YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAA 812 (962)
Q Consensus 777 -------------------l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~a 812 (962)
.++|+++++++ |.+..+++||.+|.++||..+...
T Consensus 165 ~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 165 GISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 13889999885 678899999999999999988653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0039 Score=57.07 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=68.4
Q ss_pred eEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC-------------------------
Q psy886 715 LTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE------------------------- 769 (962)
Q Consensus 715 l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~------------------------- 769 (962)
+...+.++---++=++|+++|++|++. ++|++-|||..-+-...|+-.||....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~v 97 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVV 97 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEE
Confidence 345566666677889999999999999 999999999999999999999985321
Q ss_pred ----ccccCCCCCcCcEEEec-c--ChhHHHHhhccccccc
Q psy886 770 ----EDTTGKSYSKAEIGIAM-G--SGTAVAKSASEMVLAD 803 (962)
Q Consensus 770 ----~~~~g~~l~~AdVGIAm-g--~gtdvAkeaADivL~d 803 (962)
+.++-.+|+.||+||.. + .-.+=+.++||+|+-+
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 11222345799999865 3 3567777999999853
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.014 Score=64.68 Aligned_cols=87 Identities=11% Similarity=0.236 Sum_probs=69.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Cccc---------cCC-------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDT---------TGK------------- 775 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~---------~g~------------- 775 (962)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..- ++.. .++
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~l 260 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEY 260 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHc
Confidence 5899999999999999999999999998888899999998420 1111 110
Q ss_pred ------------------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHH
Q psy886 776 ------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAV 813 (962)
Q Consensus 776 ------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai 813 (962)
.++.|++|||| ++.+..|+.||.++-..++..+...+
T Consensus 261 gi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 261 EIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 01489999999 77888899999999888888777543
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.015 Score=57.23 Aligned_cols=82 Identities=16% Similarity=0.233 Sum_probs=63.0
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC---CCc--------------------------cccCCCCCcCcEEE
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFT---EEE--------------------------DTTGKSYSKAEIGI 784 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~---~~~--------------------------~~~g~~l~~AdVGI 784 (962)
+|+.|++.|+++.++||+....+..+.+++|+.. ... ..+...++.|.+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 115 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSV 115 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 9999999999999999999999999999999852 100 00011125899999
Q ss_pred eccChhHHHHhhcccccccCC----hhHHHHHHHH
Q psy886 785 AMGSGTAVAKSASEMVLADDN----FSSIVAAVEE 815 (962)
Q Consensus 785 Amg~gtdvAkeaADivL~dd~----f~~iv~ai~~ 815 (962)
+|..+.+..+..||.++..+. |..+++.+.+
T Consensus 116 ~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~ 150 (154)
T TIGR01670 116 AVADAHPLLIPRADYVTRIAGGRGAVREVCELLLL 150 (154)
T ss_pred ecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999888899999999997542 6666665544
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.025 Score=56.41 Aligned_cols=83 Identities=16% Similarity=0.242 Sum_probs=62.5
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCccc-----------------------cCC------CCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDT-----------------------TGK------SYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~~-----------------------~g~------~l~~AdVG 783 (962)
.+|+.|+++|+++.++|+.....+..+.+++|+..--... -|. .++.|+++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~ 120 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLA 120 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCe
Confidence 6999999999999999999999999999999995210000 011 12589999
Q ss_pred EeccChhHHHHhhcccccccCC----hhHHHHHHHH
Q psy886 784 IAMGSGTAVAKSASEMVLADDN----FSSIVAAVEE 815 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~dd~----f~~iv~ai~~ 815 (962)
+||+++.+..|++||.|..+++ +..+.+.+-.
T Consensus 121 ~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~ 156 (169)
T TIGR02726 121 VAVGDAVADVKEAAAYVTTARGGHGAVREVAELILK 156 (169)
T ss_pred EECcCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999876433 3444444443
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.14 Score=54.02 Aligned_cols=40 Identities=28% Similarity=0.356 Sum_probs=37.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.+.++|+++++.|+++++.||-....+..+++++|+.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 6789999999999999999999999999999999999873
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.14 Score=55.35 Aligned_cols=40 Identities=25% Similarity=0.399 Sum_probs=38.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+.+.++|+++++.|+++++.||-....+..+.+++|+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~ 60 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLD 60 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999999999983
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.064 Score=54.44 Aligned_cols=85 Identities=15% Similarity=0.208 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---Ccc--------------------ccC------CCCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE---EED--------------------TTG------KSYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~---~~~--------------------~~g------~~l~~AdVG 783 (962)
.+|+.|++.|+++.++||.....+..+++++|+..- ... .-| ..++.|.++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQGQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 699999999999999999999999999999998521 000 001 112589999
Q ss_pred EeccChhHHHHhhccccccc----CChhHHHHHHHHhH
Q psy886 784 IAMGSGTAVAKSASEMVLAD----DNFSSIVAAVEEGR 817 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~d----d~f~~iv~ai~~gR 817 (962)
++++.+.+..+..||.|+-. ..+..+.+.+...|
T Consensus 135 ~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 135 VAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred EecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 99988889999999999853 22455565555443
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.16 Score=53.00 Aligned_cols=41 Identities=24% Similarity=0.359 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.++..++|++|++.|+++++.||-....+..+++++++.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 47889999999999999999999999999999999999874
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.23 Score=53.87 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
.+.+...++|+++++.|+++++.||=....+..+.+++|+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSL 58 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC
Confidence 5888999999999999999999999999999999999987
|
|
| >KOG0210|consensus | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.065 Score=62.16 Aligned_cols=62 Identities=23% Similarity=0.368 Sum_probs=52.3
Q ss_pred eeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeec--CCeEEEEecCCCCCCcceeccCCC
Q psy886 252 VIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKHTDA 316 (962)
Q Consensus 252 ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~--~~~l~VdeS~LTGEs~pv~K~~~~ 316 (962)
.-|+|. ...++++|++||+|+++.+++||||+++++.+ ++.|.+-+..|+||+..+.|-+.+
T Consensus 168 ltr~~~---~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp 231 (1051)
T KOG0210|consen 168 LTRDGT---RREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVP 231 (1051)
T ss_pred eccCCc---ccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccch
Confidence 346664 44599999999999999999999999999753 568999999999999988887653
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.28 Score=51.38 Aligned_cols=40 Identities=25% Similarity=0.520 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
.+.+.+.++|+++++.||++++.||-....+..+++++|+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 4678899999999999999999999999999999999985
|
catalyze the same reaction as SPP. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.36 Score=49.80 Aligned_cols=89 Identities=13% Similarity=0.257 Sum_probs=65.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------CC-ccccCCC--------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT--------EE-EDTTGKS-------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~--------~~-~~~~g~~-------------------- 776 (962)
+++|++++.|+.+|+.| ++.++||-....+..+++++|+.. .+ +..+|..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~~~ 146 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 146 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhCCC
Confidence 57999999999999975 999999999999999999999842 01 2223211
Q ss_pred -------------CCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHh
Q psy886 777 -------------YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 777 -------------l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~g 816 (962)
++.||+|||+.....+.++|=|+-... +.+.+..++.++
T Consensus 147 ~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (203)
T TIGR02137 147 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH-TYEDLKREFLKA 198 (203)
T ss_pred EEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCccc-CHHHHHHHHHHH
Confidence 148999999976666666665655443 466777766654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.44 Score=49.95 Aligned_cols=42 Identities=19% Similarity=0.271 Sum_probs=39.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-++.||+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 357999999999999999999999999999999999999984
|
|
| >KOG0206|consensus | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.15 Score=64.49 Aligned_cols=71 Identities=27% Similarity=0.372 Sum_probs=62.0
Q ss_pred hcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeec--CCeEEEEecCCCCCCcceeccCC
Q psy886 244 EYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY--STTIRIDQSILTGESVSVIKHTD 315 (962)
Q Consensus 244 ~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~--~~~l~VdeS~LTGEs~pv~K~~~ 315 (962)
+.+...++|.|++.. +++..|++|++||+|.+..++.+|||.+|++++ .+.|+|++++|+||+....|...
T Consensus 111 ~iN~~~~~v~~~~~~-~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l 183 (1151)
T KOG0206|consen 111 EVNNRKVEVLRGDGC-FVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQAL 183 (1151)
T ss_pred HhhcceeEEecCCce-eeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeeh
Confidence 345567899998776 899999999999999999999999999999643 46799999999999999988763
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.51 Score=49.99 Aligned_cols=41 Identities=15% Similarity=0.405 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+-+++.+++++++++|+++++.||-....+..+.+++++.
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 46789999999999999999999999999999999999974
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=89.73 E-value=0.64 Score=43.68 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=41.5
Q ss_pred cccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 722 GMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 722 ~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.-..++++++++.+++|++.|++++++||-....+....+++|+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 455689999999999999999999999999999999999999973
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=89.63 E-value=0.39 Score=48.77 Aligned_cols=39 Identities=23% Similarity=0.540 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 729 KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 729 ~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
+++++.|+.++++|++++++||+....+..+|+.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 788899999999999999999999999999999999964
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.03 E-value=0.66 Score=48.20 Aligned_cols=42 Identities=26% Similarity=0.352 Sum_probs=40.6
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+++|++.+.++.+|++|.+|+++||=-..-+..||+.+|+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d 117 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGID 117 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCc
Confidence 689999999999999999999999999999999999999995
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.71 E-value=0.39 Score=52.01 Aligned_cols=62 Identities=18% Similarity=0.329 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 753 KATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
..-...+++.+||-.. |..++-+-|+.|++|+|||++++..|++||.|..+++=..+..+|+
T Consensus 198 g~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 198 GTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 3444567888898543 3344445568999999999999999999999987776667777665
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.44 E-value=1.6 Score=45.58 Aligned_cols=89 Identities=17% Similarity=0.319 Sum_probs=67.4
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcc-------------------------cc-----
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEED-------------------------TT----- 773 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~-------------------------~~----- 773 (962)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..-=.. ..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 456889999999999999999999999999999999999998531000 00
Q ss_pred --CCCC------CcCc---EEEecc-C-hhHHHHhhcccccccCChhHHHHHHH
Q psy886 774 --GKSY------SKAE---IGIAMG-S-GTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 774 --g~~l------~~Ad---VGIAmg-~-gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
|... ++|+ ||+..| . +.......+|.++ +++..|...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 1100 3554 889998 3 6778888899998 66777776554
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.06 E-value=1.1 Score=43.08 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-.|+.+.++||+|.+|||-+......=|+++||-
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~ 75 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK 75 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc
Confidence 5899999999999999999999999999999994
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.96 E-value=0.64 Score=50.30 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=50.0
Q ss_pred EEEcCCCHHHH-HHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 746 IVITGDNKATA-EAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 746 ~MiTGD~~~TA-~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
++-.|.+..+| ..+++.+|+-.. |..++-+.++.|++|+|||++.+..|++||.|..+++=..+..+|+
T Consensus 193 i~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 193 IARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred EecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 44456555554 457888887542 3334445567999999999888888999999987777777777765
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.75 E-value=2.4 Score=43.57 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=37.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.||+++.++.|+++ +++.++|+-....+..+.+++|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 4689999999999999 999999999999999999999974
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.2 Score=44.43 Aligned_cols=41 Identities=17% Similarity=0.345 Sum_probs=38.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++++.++.|++.|++++++||.....+..+++.+|+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 36899999999999999999999999999999999999984
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=86.34 E-value=1.6 Score=46.91 Aligned_cols=43 Identities=14% Similarity=0.201 Sum_probs=40.2
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
-++|||+++.++.|++.||++.++||=-...+..+.++.|+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~ 162 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYH 162 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCC
Confidence 3679999999999999999999999999999999999999854
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=86.31 E-value=2.8 Score=43.13 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999999999999999984
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=84.33 E-value=1.3 Score=45.55 Aligned_cols=43 Identities=16% Similarity=0.212 Sum_probs=39.9
Q ss_pred cCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 724 LDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 724 ~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..++++++.+.++.+++.|++++++||-....+..+++.+|+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 3468999999999999999999999999999999999999984
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=84.17 E-value=1.8 Score=45.31 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=38.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 37899999999999999999999999999999999999984
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=83.92 E-value=0.82 Score=49.35 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcc--cccccCChhHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASE--MVLADDNFSSIVAAVE 814 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaAD--ivL~dd~f~~iv~ai~ 814 (962)
+..-...+++.+||-.. |..++-+-++.|+.|||||++++..|++|| .|..+++=..+..+++
T Consensus 191 Kg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 191 KGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred hHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 44445667889998543 333444456899999999999999999988 5655555556666654
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=83.60 E-value=2 Score=43.94 Aligned_cols=41 Identities=10% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD 120 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999999999973
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=82.74 E-value=1 Score=53.99 Aligned_cols=64 Identities=13% Similarity=0.297 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 751 DNKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
++...-..+++.+||-.+ |..++-.-|+.|+.|||||+|.+..|++||.|..+++=..+..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344555677889998543 3334444567999999999999999999999987766667777665
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=81.17 E-value=2.8 Score=39.69 Aligned_cols=41 Identities=24% Similarity=0.348 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDN--------KATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~--------~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|+++|+++.++|+.. .+....+.+.+|+.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 578999999999999999999999988 77788888888874
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 962 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 0.0 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 0.0 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 0.0 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 0.0 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 5e-60 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-14 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 4e-59 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-13 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-59 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 4e-14 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-57 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-13 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-26 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 4e-05 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 4e-23 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 5e-11 | ||
| 2voy_H | 48 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-14 | ||
| 2voy_G | 36 | Cryoem Model Of Copa, The Copper Transporting Atpas | 1e-12 | ||
| 2voy_K | 32 | Cryoem Model Of Copa, The Copper Transporting Atpas | 1e-10 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-10 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 1e-05 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 9e-08 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-07 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 8e-06 | ||
| 2voy_E | 30 | Cryoem Model Of Copa, The Copper Transporting Atpas | 1e-05 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-05 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-05 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 6e-05 | ||
| 1mo7_A | 213 | Atpase Length = 213 | 3e-04 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|2VOY|H Chain H, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 48 | Back alignment and structure |
|
| >pdb|2VOY|G Chain G, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 36 | Back alignment and structure |
|
| >pdb|2VOY|K Chain K, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 32 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2VOY|E Chain E, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 30 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|1MO7|A Chain A, Atpase Length = 213 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 962 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 5e-52 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 4e-06 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-35 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 4e-35 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-174 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-32 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 4e-32 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-131 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-122 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-27 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-27 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-18 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-17 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-15 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-10 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-07 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-15 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-09 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-14 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-14 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-10 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 3e-09 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 3e-09 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-09 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-09 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 882 bits (2282), Expect = 0.0
Identities = 442/688 (64%), Positives = 504/688 (73%), Gaps = 68/688 (9%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
Q ERNAE+AIEALKEYEPEMGKV R D+ VQ+++A++IVPGDIVEV+VGDK+PADIR+
Sbjct: 108 WQ-ERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRI 166
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
+ I STT+R+DQSILTGESVSVIKHT+ VPDPRAVNQDKKN+LFSGTN+AAGKA GIV
Sbjct: 167 LSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVAT 226
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG++T IGKIR +M+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HG
Sbjct: 227 TGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHG 286
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
GSWI+GA+YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT
Sbjct: 287 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 346
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLTTNQMSV +MFI DK++G S EF ITGSTY P G+V N I+
Sbjct: 347 SVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSG 406
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRR 588
++ L EL TIC +CNDS++DFNE K +EKVGEATETAL L EK+N FN L +
Sbjct: 407 QFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKV 466
Query: 589 EQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLER 648
E+A A + KKEFTLEFSRDRKSMS YC+P S + G K+FVKGAPEGV++R
Sbjct: 467 ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSP-AKSSRAAVGNKMFVKGAPEGVIDR 525
Query: 649 CTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKF 708
C + R+G+ + P+T +K +IL + +++GTGRDTLRCL LAT D P K E+M L DS++F
Sbjct: 526 CNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRF 585
Query: 709 ASYEVNLTFVGVVGMLDPPRKEVFDSIAR----------------------CRAAGI--- 743
YE +LTFVGVVGMLDPPRKEV SI CR GI
Sbjct: 586 MEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE 645
Query: 744 ----RVIVITG------DNKATAEAICRRIGVF--TEEEDT----------------TG- 774
TG EA RR F E TG
Sbjct: 646 NEEVADRAYTGREFDDLPLAEQREAC-RRACCFARVEPSHKSKIVEYLQSYDEITAMTGD 704
Query: 775 --------KSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQF 826
K KAEIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEGRAIYNNMKQF
Sbjct: 705 GVNDAPALK---KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQF 761
Query: 827 IRYLISSNIGEVVSIFLTAALGLPEALI 854
IRYLISSN+GEVV IFLTAALGLPEALI
Sbjct: 762 IRYLISSNVGEVVCIFLTAALGLPEALI 789
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 5e-52
Identities = 100/129 (77%), Positives = 117/129 (90%), Gaps = 3/129 (2%)
Query: 80 VLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI 139
VLA FEE E+ T+T+FVEPFVILLILIANAIVGVWQERNAE+AIEALKEYEPEMGKV
Sbjct: 75 VLAWFEEGEE---TITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVY 131
Query: 140 RGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKH 199
R D+ VQ+++A++IVPGDIVEV+VGDK+PADIR++ I STT+R+DQSILTGESVSVIKH
Sbjct: 132 RADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKH 191
Query: 200 TDAVPDPRA 208
T+ VPDPRA
Sbjct: 192 TEPVPDPRA 200
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 4e-06
Identities = 29/44 (65%), Positives = 31/44 (70%)
Query: 914 THHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMN 957
TH M C F+GLDC IF P PMTMALSVLVTIEM NA+N
Sbjct: 872 THFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN 915
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 568 bits (1467), Expect = 0.0
Identities = 159/561 (28%), Positives = 262/561 (46%), Gaps = 60/561 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
Q E + + I + K P+ VIR ++ A ++V GD+VE+ GD++PADIR+
Sbjct: 159 YQ-EFKSTNIIASFKNLVPQQATVIRDGD--KFQINADQLVVGDLVEMKGGDRVPADIRI 215
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
++ + ++D S LTGES + + + + +NI F T G A+G+V+
Sbjct: 216 LQ--AQGRKVDNSSLTGESEPQTRSPECTHE---SPLETRNIAFFSTMCLEGTAQGLVVN 270
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG T IG+I + S E KTP+ +++ F + ++ + + + + + G
Sbjct: 271 TGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAM------CIG 324
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
++++ V+ +A+ VA +PEGL A +T CL+L +R+A KN +V++L +VETLG T
Sbjct: 325 YTFLRAMVF----FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGST 380
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
SVICSDKTGTLT N+M+VS ++ + I + + +
Sbjct: 381 SVICSDKTGTLTQNRMTVSHLWFDNHI---------HSADTTEDQSGQTFDQSS------ 425
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEK---VGEATETALIVLAEKLNPFNVSKSGL 585
ET L + +CN +A + K +G+A+ETAL+ +E
Sbjct: 426 --ETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSEL----------- 472
Query: 586 GRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGV 645
+ ++ K + F+ K S L +KGAPE V
Sbjct: 473 -----TLGNAMGYRERFPKVCEIPFNSTNKFQLSIH---TLEDPRDPRHVLVMKGAPERV 524
Query: 646 LERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADS 705
LERC+ I Q+ PL + G R LG K A
Sbjct: 525 LERCSSILIKGQELPLDEQWREAFQTAYLSL--GGLGERVLGFCQLYLSEKDYPPGYAFD 582
Query: 706 TKFASY-EVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 764
+ ++ L+F G+V M+DPPR V D++ +CR AGIRVI++TGD+ TA+AI +G
Sbjct: 583 VEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVG 642
Query: 765 VFTEEEDTTGKSYSKAEIGIA 785
+ +E +T ++ + +
Sbjct: 643 IISEGSETVEDIAARLRVPVD 663
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-35
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 80 VLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI 139
+ + E +T + ++ +++ G +QE + + I + K P+ VI
Sbjct: 123 IAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVI 182
Query: 140 RGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKH 199
R ++ A ++V GD+VE+ GD++PADIR+++ + ++D S LTGES +
Sbjct: 183 RDGD--KFQINADQLVVGDLVEMKGGDRVPADIRILQ--AQGRKVDNSSLTGESEPQTRS 238
Query: 200 TDAVPD 205
+ +
Sbjct: 239 PECTHE 244
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 4e-35
Identities = 41/216 (18%), Positives = 80/216 (37%), Gaps = 32/216 (14%)
Query: 779 KAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGE 837
KA+IG+AMG +G+ AK+A++M+L DDNF+SIV VE+GR I++N+K+ I Y ++ NI E
Sbjct: 737 KADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPE 796
Query: 838 VVSIFLTAALGLPEALI-----------------------KKISTTNRGKKKKLSYNFLD 874
+ + + +P L + + + ++
Sbjct: 797 LTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVN 856
Query: 875 ISLLGPAIHYQ-VDLTGGPDQVYLSGL------PDSIYYLPTTVFATHHMSCLGGGDEFK 927
L + + Y + + P L H +
Sbjct: 857 EPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEW 916
Query: 928 GLDCHIFHDPHPMTMALSVLVTIEMLNAMN-RYGRH 962
++ T+ + ++ + + + R
Sbjct: 917 TFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRL 952
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 532 bits (1374), Expect = e-174
Identities = 163/560 (29%), Positives = 266/560 (47%), Gaps = 60/560 (10%)
Query: 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRL 288
Q E + +++ K P+ VIR + + A+ +V GD+VEV GD+IPAD+R+
Sbjct: 154 YQ-EAKSSRIMDSFKNMVPQQALVIRDGE--KSTINAEFVVAGDLVEVKGGDRIPADLRI 210
Query: 289 IKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMG 348
I + ++D S LTGES + + + + +NI F TN G ARG+V+
Sbjct: 211 IS--AHGCKVDNSSLTGESEPQTRSPEFSSENPL---ETRNIAFFSTNCVEGTARGVVVY 265
Query: 349 TGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHG 408
TG T +G+I T S E +TP+ +++ F ++ V + V+ + +++ G
Sbjct: 266 TGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL------ILG 319
Query: 409 GSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 468
SW++ + + VA +PEGL A +T CL L +RMA+KN +V++L +VETLG T
Sbjct: 320 YSWLEA----VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGST 375
Query: 469 SVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGA 528
S ICSDKTGTLT N+M+V+ M+ ++I E + +
Sbjct: 376 STICSDKTGTLTQNRMTVAHMWFDNQI---------HEADTTENQSGAAFDKTS------ 420
Query: 529 DYETLHELGTICIMCNDSAIDFNEFKQAFEK---VGEATETALIVLAEKLNPFNVSKSGL 585
T L I +CN + + K G+A+E+AL+ E
Sbjct: 421 --ATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIEL----------- 467
Query: 586 GRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGV 645
Q + + K + F+ K S ++ K S L +KGAPE +
Sbjct: 468 -----CCGSVQGMRDRNPKIVEIPFNSTNKYQLSIH---ENEKSSESRYLLVMKGAPERI 519
Query: 646 LERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLA-D 704
L+RC+ + + PL +K + + G R LG P + D
Sbjct: 520 LDRCSTILLNGAEEPLKEDMKEAFQNAYLEL--GGLGERVLGFCHFALPEDKYNEGYPFD 577
Query: 705 STKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 764
+ + +L FVG++ M+DPPR V D++ +CR+AGI+VI++TGD+ TA+AI + +G
Sbjct: 578 ADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637
Query: 765 VFTEEEDTTGKSYSKAEIGI 784
+ +E +T ++ I I
Sbjct: 638 IISEGNETIEDIAARLNIPI 657
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-32
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 80 VLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVI 139
+ + + + V+ ++I +QE + +++ K P+ VI
Sbjct: 118 LAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVI 177
Query: 140 RGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKH 199
R + + A+ +V GD+VEV GD+IPAD+R+I + ++D S LTGES +
Sbjct: 178 RDGE--KSTINAEFVVAGDLVEVKGGDRIPADLRIIS--AHGCKVDNSSLTGESEPQTRS 233
Query: 200 TDAVPDPRAE 209
+ + E
Sbjct: 234 PEFSSENPLE 243
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 4e-32
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 779 KAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGE 837
KA+IG+AMG SG+ V+K A++M+L DDNF+SIV VEEGR I++N+K+ I Y ++SNI E
Sbjct: 732 KADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE 791
Query: 838 VVSIFLTAALGLPEAL 853
+ + +P L
Sbjct: 792 ITPFLVFIIGNVPLPL 807
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-131
Identities = 139/683 (20%), Positives = 248/683 (36%), Gaps = 190/683 (27%)
Query: 227 RMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286
VQ E A S ++ LK+ V+R ++++ A E+VPGDI++V G IPAD
Sbjct: 158 GFVQ-EFQAGSIVDELKKTLALKAVVLRDGT--LKEIEAPEVVPGDILQVEEGTIIPADG 214
Query: 287 RLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIV 346
R++ + +++DQS LTGES++V KH + +F+ + V G+A ++
Sbjct: 215 RIVTDDAF-LQVDQSALTGESLAVDKHKG-------------DQVFASSAVKRGEAFVVI 260
Query: 347 MGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPA 406
TG NT +G+ ++ + L+ G L ++ + VW +
Sbjct: 261 TATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF------Y 314
Query: 407 HGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLG 466
++ + +A+ + +P GLPAV+TT +A+G +AKK AIV+ L ++E+L
Sbjct: 315 RSNPIVQI----LEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLA 370
Query: 467 CTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIK 526
++CSDKTGTLT N++S+ +
Sbjct: 371 GVEILCSDKTGTLTKNKLSLHDPYTVA--------------------------------- 397
Query: 527 GADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLG 586
G D E L + K +K +A + A + +
Sbjct: 398 GVDPEDLMLTACLA----------ASRK---KKGIDAIDKAFLKSLKYYPRA-------- 436
Query: 587 RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 646
+ V +K+K F K + + + VKGAP VL
Sbjct: 437 ---------KSVLSKYKVLQFHPFDPVSKKVVAVV------ESPQGERITCVKGAPLFVL 481
Query: 647 ERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADST 706
+ P+ + + ++ R LG+A
Sbjct: 482 KTVEEDH------PIPEEVDQAYKNKVAEFA--TRGFRSLGVARKRG------------- 520
Query: 707 KFASYEVNLTFVGVVGMLDPPRKEVFDS--------------------IAR--CRAAGI- 743
E + +G++ +DPPR + + + IAR R G+
Sbjct: 521 -----EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575
Query: 744 ------RVIVITGDNKATAEAICRRIGVFTEEEDTTG--------K-------------- 775
+ + G + + E G K
Sbjct: 576 TNIYNAERLGLGGGGDMPGSEVYDFV------EAADGFAEVFPQHKYNVVEILQQRGYLV 629
Query: 776 -----------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMK 824
S KA+ GIA+ + A+SA+++V +I+ A++ R I++ M
Sbjct: 630 AMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMY 689
Query: 825 QFIRYLISSNIGEVVSIFLTAAL 847
++ Y I+ +I + + L A+
Sbjct: 690 AYVVYRIALSIHLEIFLGLWIAI 712
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-27
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 97 FVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 156
+V+ VI +L+ NA+VG QE A S ++ LK+ V+R ++++ A E+VP
Sbjct: 141 WVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGT--LKEIEAPEVVP 198
Query: 157 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTD 201
GDI++V G IPAD R++ + +++DQS LTGES++V KH
Sbjct: 199 GDILQVEEGTIIPADGRIVTDDA-FLQVDQSALTGESLAVDKHKG 242
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 391 bits (1006), Expect = e-122
Identities = 126/546 (23%), Positives = 213/546 (39%), Gaps = 121/546 (22%)
Query: 227 RMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADI 286
++ E NA +A AL KV+R K + A +VPGDIV + +GD IPAD
Sbjct: 110 SFIE-ENNAGNAAAALMAGLAPKTKVLRDGK--WSEQEAAILVPGDIVSIKLGDIIPADA 166
Query: 287 RLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIV 346
RL++ +++DQS LTGES+ V KH +FSG+ G+ +V
Sbjct: 167 RLLE--GDPLKVDQSALTGESLPVTKHPG-------------QEVFSGSTCKQGEIEAVV 211
Query: 347 MGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPA 406
+ TG++T GK + T + Q+ L G I+I V + +
Sbjct: 212 IATGVHTFFGKAAHLVDSTNQ-VGHFQKVLTAIGNFCICSIAIGMVIEIIV-MYPI---- 265
Query: 407 HGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLG 466
+ G + L + IP +P V++ +A+G+ R++++ AI + + ++E +
Sbjct: 266 QRRKYRDG----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 321
Query: 467 CTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIK 526
V+CSDKTGTLT N++SV + + +G + V L +
Sbjct: 322 GMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKD---------------QVLLFAA--- 363
Query: 527 GADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLG 586
M + + +A + A++ +
Sbjct: 364 ---------------MASR------------VENQDAIDAAMVGMLAD------------ 384
Query: 587 RREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVL 646
++ ++ L F+ K + GS KGAPE +L
Sbjct: 385 --------PKEARAGIREVHFLPFNPVDKRTALTY------IDGSGNWHRVSKGAPEQIL 430
Query: 647 ERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADST 706
E + L ++L + +Y LR L +A P K ++
Sbjct: 431 ELA----------KASNDLSKKVLSIIDKY--AERGLRSLAVARQVVPEKTKE------- 471
Query: 707 KFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766
S FVG++ + DPPR + ++I R G+ V +ITGD A + RR+G+
Sbjct: 472 ---SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528
Query: 767 TEEEDT 772
T +
Sbjct: 529 TNMYPS 534
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-27
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 97 FVEPFVILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVP 156
+ + I+ +L+ N+ + +E NA +A AL KV+R K + A +VP
Sbjct: 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGK--WSEQEAAILVP 150
Query: 157 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTD 201
GDIV + +GD IPAD RL++ +++DQS LTGES+ V KH
Sbjct: 151 GDIVSIKLGDIIPADARLLE--GDPLKVDQSALTGESLPVTKHPG 193
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-27
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 779 KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEV 838
KA+IGIA+ T A+ AS++VL + S I++AV RAI+ MK + Y +S I V
Sbjct: 598 KADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 657
Query: 839 VSIFLTAALGLP 850
L AL
Sbjct: 658 FGFML-IALIWE 668
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 3e-27
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 33/169 (19%)
Query: 560 VGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSS 619
+ +TA++ ++ + + + ++W+K + F +R+ MS
Sbjct: 32 LKNLLDTAVLEGTDEES------------------ARSLASRWQKIDEIPFDFERRRMSV 73
Query: 620 YCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTG 679
+ +L KGA + +L C+ R + PL + +I +T
Sbjct: 74 VV------AENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTL--N 125
Query: 680 RDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPR 728
R LR + +AT P + D AD E +L G + LD
Sbjct: 126 RQGLRVVAVATKYLPAREGDYQRAD-------ESDLILEGYIAFLDHHH 167
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 84.8 bits (211), Expect = 3e-18
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 34/139 (24%)
Query: 717 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG---VFTE---EE 770
GV+ + D R E ++I++ +A GI+ +++TGDN+ A+ + +G F E
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPH- 193
Query: 771 DTTGKSY------------------------SKAEIGIAMGSGTAVAKSASEMVLADDNF 806
K+ ++A++GIA+G+GT VA +++VL ++
Sbjct: 194 ---EKAEKVKEVQQKYVTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDP 250
Query: 807 SSIVAAVEEGRAIYNNMKQ 825
+ A VE R Y+
Sbjct: 251 RDVAAIVELSRKTYSKFHG 269
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 82.5 bits (205), Expect = 2e-17
Identities = 20/140 (14%), Positives = 62/140 (44%), Gaps = 27/140 (19%)
Query: 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG---VFTE- 768
+N + + D PR + D + + + G+++I+++GD + + + + + ++
Sbjct: 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNL 182
Query: 769 -EED---------TTGKS-------------YSKAEIGIAMGSGTAVAKSASEMVLADDN 805
ED G + A++ +AMG+G ++K+ ++++L ++
Sbjct: 183 SPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSND 242
Query: 806 FSSIVAAVEEGRAIYNNMKQ 825
+++ ++ + + N +
Sbjct: 243 IGTLLGLIKNRKRLSNAIPS 262
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 2e-15
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 26/139 (18%)
Query: 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV--FTEEE 770
N G++ + D ++ ++ + GI+V +ITGDN +AEAI R + + E
Sbjct: 444 RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV 503
Query: 771 DTTGKSY------------------------SKAEIGIAMGSGTAVAKSASEMVLADDNF 806
KS ++A++GIA+GSG+ VA + ++VL D+
Sbjct: 504 LPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDL 563
Query: 807 SSIVAAVEEGRAIYNNMKQ 825
+VAA++ R + +KQ
Sbjct: 564 RDVVAAIQLSRKTMSKIKQ 582
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 7e-10
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 49/271 (18%)
Query: 237 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTI 296
AI+ L + + VIR K V +E+ GDIV V G+KIP D +++ S
Sbjct: 122 EAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-- 177
Query: 297 RIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIG 356
+D+S+++GE V V+K +N + T V G T +
Sbjct: 178 -VDESMISGEPVPVLKSKGDEVFGATINN-TGVLKIRATRV------------GGETLLA 223
Query: 357 KIRTEMSETEEIKTPLQQKLDEFGEQLSKV-------ISIICVAVWAINIGHFNDPAHGG 409
+I + + K P+Q+ D ++ ++I W I
Sbjct: 224 QIVKLVEDAMGSKPPIQRLAD----KVVAYFIPTVLLVAISAFIYWYF-IA-------HA 271
Query: 410 SWIKGAVYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRRMAKKNAIVRSLPSVETL 465
++ F +A+ V A P GL P +T G + A+ ++++ ++E
Sbjct: 272 PL----LFAFTTLIAVLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVA 323
Query: 466 GCTSVICSDKTGTLTTNQMSVSRMFIFDKIE 496
+ + DKTGTLT + V+ + + E
Sbjct: 324 EKVTAVIFDKTGTLTKGKPEVTDLVPLNGDE 354
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 1e-07
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 15/107 (14%)
Query: 102 VILLILIANAIVGVWQERNAES----AIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 157
++ +L +G E A+S AI+ L + + VIR K V +E+ G
Sbjct: 102 LLAFLL-----LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVG 154
Query: 158 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHT-DAV 203
DIV V G+KIP D +++ S +D+S+++GE V V+K D V
Sbjct: 155 DIVIVRPGEKIPVDGVVVEGESY---VDESMISGEPVPVLKSKGDEV 198
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 5e-15
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 27/140 (19%)
Query: 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV------- 765
V+ V ++ + DP + ++I + +GI ++++TGD+K TAEA+ +G+
Sbjct: 541 VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEI 600
Query: 766 -------FTEEEDTTGKS-------------YSKAEIGIAMGSGTAVAKSASEMVLADDN 805
E G +KA+IGIAMG+GT VA ++ + L +
Sbjct: 601 MPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGD 660
Query: 806 FSSIVAAVEEGRAIYNNMKQ 825
I A + +N++Q
Sbjct: 661 LRGIAKARRLSESTMSNIRQ 680
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 5e-09
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 55/259 (21%)
Query: 237 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTI 296
SAI AL + PE I+ D S ++V + GD++ V G+KIP D + + S
Sbjct: 214 SAIRALLKLVPESAHRIKEDGS-EEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-- 270
Query: 297 RIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG----KARGIVMGTGLN 352
+D+S++TGE + V K K + T G KA + G +
Sbjct: 271 -VDESMVTGEPIPVAKEAS----------AK---VIGATINQTGSFVMKALHV----GSD 312
Query: 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV-------ISIICVAVWAINIGHFNDP 405
T + +I +S+ + + P+Q+ D +S ++++ VWA+ +G
Sbjct: 313 TMLARIVQMVSDAQRSRAPIQRLAD----TVSGWFVPAVILVAVLSFIVWAL-LGPQPAL 367
Query: 406 AHGGSWIKGAVYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRRMAKKNAIVRSLPS 461
++G AV++ + A P GL P I G + A+ ++++ +
Sbjct: 368 SYG----------LIAAVSVLIIACPCALGLATPMSIMV----GVGKGAQSGVLIKNAEA 413
Query: 462 VETLGCTSVICSDKTGTLT 480
+E + + + DKTGTLT
Sbjct: 414 LERMEKVNTLVVDKTGTLT 432
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 123 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTI 182
SAI AL + PE I+ D S ++V + GD++ V G+KIP D + + S
Sbjct: 214 SAIRALLKLVPESAHRIKEDGS-EEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-- 270
Query: 183 RIDQSILTGESVSVIKHTDA 202
+D+S++TGE + V K A
Sbjct: 271 -VDESMVTGEPIPVAKEASA 289
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 2e-14
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 34/138 (24%)
Query: 717 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG---VFTE---EE 770
G++ + D ++ ++ + GI+V +ITGDN +AEAI R + V E
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPH- 212
Query: 771 DTTGKSY------------------------SKAEIGIAMGSGTAVAKSASEMVLADDNF 806
KS ++A++GIA+GSG+ VA + ++VL D+
Sbjct: 213 ---QKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDL 269
Query: 807 SSIVAAVEEGRAIYNNMK 824
+VAA++ R + +K
Sbjct: 270 RDVVAAIQLSRKTMSKIK 287
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 2e-14
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 717 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG-------VFTEE 769
G++ + D ++ ++ + GI+V +ITGDN +AEAI R + V +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQ 585
Query: 770 EDTTGKSY-------------------SKAEIGIAMGSGTAVAKSASEMVLADDNFSSIV 810
+ K ++A++GIA+GSG+ VA + ++VL D+ +V
Sbjct: 586 KSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVV 645
Query: 811 AAVEEGRAIYNNMKQ 825
AA++ R + +KQ
Sbjct: 646 AAIQLSRKTMSKIKQ 660
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 63.7 bits (156), Expect = 2e-10
Identities = 64/272 (23%), Positives = 109/272 (40%), Gaps = 51/272 (18%)
Query: 237 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTI 296
AI+ L + + VIR K V +E+ GDIV V G+KIP D +++ S
Sbjct: 200 EAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-- 255
Query: 297 RIDQSILTGESVSVIKHT-DAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAI 355
+D+S+++GE V V+K D V F T G + G T +
Sbjct: 256 -VDESMISGEPVPVLKSKGDEV--------------FGATINNTGVLKIRATRVGGETLL 300
Query: 356 GKIRTEMSETEEIKTPLQQKLDEFGEQLSKV-------ISIICVAVWAINIGHFNDPAHG 408
+I + + K P+Q+ D ++ ++I W I H
Sbjct: 301 AQIVKLVEDAMGSKPPIQRLAD----KVVAYFIPTVLLVAISAFIYWYF-IAHAP----- 350
Query: 409 GSWIKGAVYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRRMAKKNAIVRSLPSVET 464
++ F +A+ V A P GL P +T G + A+ ++++ ++E
Sbjct: 351 ------LLFAFTTLIAVLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEV 400
Query: 465 LGCTSVICSDKTGTLTTNQMSVSRMFIFDKIE 496
+ + DKTGTLT + V+ + + E
Sbjct: 401 AEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDE 432
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 5e-08
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 102 VILLILIANAIVGVWQE----RNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 157
++ +L +G E AI+ L + + VIR K V +E+ G
Sbjct: 180 LLAFLL-----LGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVG 232
Query: 158 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHT-DAV 203
DIV V G+KIP D +++ S +D+S+++GE V V+K D V
Sbjct: 233 DIVIVRPGEKIPVDGVVVEGESY---VDESMISGEPVPVLKSKGDEV 276
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 73.0 bits (178), Expect = 4e-13
Identities = 75/591 (12%), Positives = 156/591 (26%), Gaps = 177/591 (29%)
Query: 462 VETLGCTSVICSDKT-GTLTTNQMSVSRMFIFDKIEGSDS----SFLEFEITGSTYEPIG 516
V+ C V D L+ + D I S + F S E +
Sbjct: 30 VDNFDCKDV--QDMPKSILSKEE--------IDHIIMSKDAVSGTLRLFWTLLSKQEEMV 79
Query: 517 DVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLN 576
F+ +Y+ L I ++ + + +++ +
Sbjct: 80 QKFVEEVLRI--NYKFLMS--PIKTEQRQPSMMTRMYIEQRDRLYNDNQ--------VFA 127
Query: 577 PFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKL 636
+NVS R + + +RQ L + +
Sbjct: 128 KYNVS-----RLQPYLKLRQ--------------------------ALLELR---PAKNV 153
Query: 637 FVKGAPEG------VLERCTHARIGSQKFP-----LTATLKNRILDLTRQYGTGRDTLRC 685
+ G G L+ C ++ K L N + +
Sbjct: 154 LIDGVL-GSGKTWVALDVCLSYKV-QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 686 LGLATADN----PLKPEDMNLADSTKFAS--YEVNLTFVGVVGMLD----PPRKEVFDSI 735
+ +D+ L+ + S YE L +V L F+
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL----LV--LLNVQNAKAWNAFN-- 263
Query: 736 ARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGKSYSKAE------IGIAMGSG 789
C+ +++ T + T + + + + + + +
Sbjct: 264 LSCK-----ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 790 TAVAKSASEMVLADDNFSSIVAAVEEGRAIYNN------------MKQFIRYLISSNIGE 837
+ + L S I ++ +G A ++N ++ + L + +
Sbjct: 319 PREVLTTNPRRL-----SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK 373
Query: 838 V---VSIFL------TAALGL---------PEALIKKI---STTNR-GKKKKLSYNFLDI 875
+ +S+F T L L ++ K+ S + K+ +S + +
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYL 433
Query: 876 SLLGP-----AIH------YQVDLTGGPDQVYLSGLPDSIY---YLPTTVFATHHMSCLG 921
L A+H Y + D L Y ++ HH+ +
Sbjct: 434 ELKVKLENEYALHRSIVDHYN--IPKTFDSDDLIPPYLDQYFYSHIG------HHLKNIE 485
Query: 922 GGDEFKG-----LDCH-----IFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962
+ LD I HD + S+L L + Y +
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSIL---NTLQQLKFYKPY 533
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 2e-08
Identities = 78/542 (14%), Positives = 169/542 (31%), Gaps = 146/542 (26%)
Query: 115 VWQERNAESAIEALKEYEPEMGKVIRGDK-SG-----VQKVRAKEIV---PGDIVEVSVG 165
V + + +AL E P +I G SG + + ++ I +++
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190
Query: 166 DKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKC 225
+ + L + +ID + + S N + + E +
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHS--------------SNIKLRIHSIQAELR- 235
Query: 226 GRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPAD 285
R+++ + + V+ + V+ + + +S KI
Sbjct: 236 -RLLKSKPYENCLL------------VLL-N------VQNAKAW--NAFNLSC--KI--- 268
Query: 286 IRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGI 345
L+ TT R + + S + H + D+ L K
Sbjct: 269 --LL----TT-R-FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL-------KY--- 310
Query: 346 VMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDP 405
L+ + E+ T P + + E + ++ W N H N
Sbjct: 311 -----LDCRPQDLPREVLTT----NPRRLSI--IAESIRDGLAT-----W-DNWKHVNCD 353
Query: 406 AHGGSWIKGAV----------YYFKIAVALAVAAIPEGL-----PAVITTCLALGTRRMA 450
+ I+ ++ + +++V A IP L VI + + + ++
Sbjct: 354 KL-TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 451 KKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFI--FDKIEGSDS-SFLEFEI 507
K + + + P T+ S+ K N+ ++ R + ++ + DS + +
Sbjct: 413 KYSLVEKQ-PKESTISIPSIYLELK--VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469
Query: 508 TGSTYEPIG----------------DVFLN----GSKIKGADYETLHELGTICIMCNDSA 547
Y IG VFL+ KI+ + G+I ++
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDST-AWNASGSI----LNTL 524
Query: 548 IDFNEFKQ-------AFEKVGEATETALIVLAEKL--NPF-NVSKSGLGRREQAI---AV 594
+K +E++ A L + E L + + ++ + L ++AI A
Sbjct: 525 QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584
Query: 595 RQ 596
+Q
Sbjct: 585 KQ 586
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 54.4 bits (132), Expect = 3e-09
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 124 AIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 183
AI+ L + + VIR K V +E+ GDIV V G+KIP D +++ S
Sbjct: 2 AIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY--- 56
Query: 184 IDQSILTGESVSVIKHT-DAV 203
+D+S+++GE V V+K D V
Sbjct: 57 VDESMISGEPVPVLKSKGDEV 77
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 54.4 bits (132), Expect = 3e-09
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 238 AIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297
AI+ L + + VIR K V +E+ GDIV V G+KIP D +++ S
Sbjct: 2 AIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY--- 56
Query: 298 IDQSILTGESVSVIKHT-DAV 317
+D+S+++GE V V+K D V
Sbjct: 57 VDESMISGEPVPVLKSKGDEV 77
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 3e-09
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 123 SAIEALKEYEPEMGKVIRGDKSGV----QKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY 178
A+ L + ++ D + ++V + + GDI++V G K P D R+I+ +
Sbjct: 7 EALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH 66
Query: 179 STTIRIDQSILTGESVSVIKHT-DAV 203
S +D+S++TGE++ V K V
Sbjct: 67 SM---VDESLITGEAMPVAKKPGSTV 89
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 3e-09
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 237 SAIEALKEYEPEMGKVIRGDKSGV----QKVRAKEIVPGDIVEVSVGDKIPADIRLIKIY 292
A+ L + ++ D + ++V + + GDI++V G K P D R+I+ +
Sbjct: 7 EALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH 66
Query: 293 STTIRIDQSILTGESVSVIKHT-DAV 317
S +D+S++TGE++ V K V
Sbjct: 67 SM---VDESLITGEAMPVAKKPGSTV 89
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 962 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.93 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.78 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.83 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.77 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.77 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.75 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.71 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 99.51 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 99.5 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 99.41 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.32 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 99.1 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.69 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.57 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.55 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.34 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 98.33 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.17 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.02 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 97.74 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 97.72 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 97.58 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 97.5 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 97.37 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 97.3 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 97.12 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 97.02 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 96.74 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 96.52 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.35 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.26 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 96.2 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 95.78 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 95.4 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.19 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 93.77 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 93.45 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 92.79 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 92.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 92.45 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 91.38 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 90.93 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 90.5 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 90.14 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 90.13 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 89.49 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 89.44 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 88.97 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 88.78 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 88.28 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 88.28 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 87.97 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 87.82 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 87.81 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 87.76 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 87.42 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 87.42 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 86.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 86.73 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 86.08 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 85.67 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 85.62 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 85.35 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 85.29 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 84.35 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 84.31 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 84.26 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 84.24 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 84.22 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 83.06 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 83.01 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 81.86 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 81.64 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 80.12 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 80.04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-112 Score=1074.67 Aligned_cols=801 Identities=65% Similarity=0.970 Sum_probs=607.5
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||+|.+..+++...++.. ...+++++++++++.+.+... .+.+..|+++++++++++++..
T Consensus 28 ~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~ 104 (995)
T 3ar4_A 28 DQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG---EETITAFVEPFVILLILIANAI 104 (995)
T ss_dssp HHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCS---SGGGSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccchhhHHHhHHhhHHHHHHHH
Confidence 457778889999999876554333322 223344444555544432211 0123468888899999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccE-EEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGV-QKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 191 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTG 191 (962)
++.++|+|+++++++|+++.|++++|+|||+. | ++||+++
T Consensus 105 i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~-~~~~I~~~~-------------------------------------- 145 (995)
T 3ar4_A 105 VGVWQERNAENAIEALKEYEPEMGKVYRADRK-SVQRIKARD-------------------------------------- 145 (995)
T ss_dssp HHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCS-SCEEEEGGG--------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHccCCCeEEEEeCCCc-eEEEEEHHH--------------------------------------
Confidence 99999999999999999999999999998752 2 4455544
Q ss_pred CCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCC
Q psy886 192 ESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPG 271 (962)
Q Consensus 192 Es~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~G 271 (962)
||||
T Consensus 146 ----------------------------------------------------------------------------lv~G 149 (995)
T 3ar4_A 146 ----------------------------------------------------------------------------IVPG 149 (995)
T ss_dssp ----------------------------------------------------------------------------CCTT
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 5555
Q ss_pred CEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEecc
Q psy886 272 DIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGL 351 (962)
Q Consensus 272 DIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~ 351 (962)
|+|.|++||+|||||+|+++++++|.||||+|||||.|+.|.+++.+++.....+++|++|+||.+.+|+++++|++||+
T Consensus 150 DiV~l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~ 229 (995)
T 3ar4_A 150 DIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGV 229 (995)
T ss_dssp CEEEEETTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGG
T ss_pred CEEEECCCCcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCc
Confidence 55555555555555555444466889999999999999999987665555556788999999999999999999999999
Q ss_pred chhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcC
Q psy886 352 NTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIP 431 (962)
Q Consensus 352 ~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP 431 (962)
+|++|||++++.+++.++||+|+++++++.++.++++++++++|+++...+..+..+..|.......|..++++++++||
T Consensus 230 ~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP 309 (995)
T 3ar4_A 230 STEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIP 309 (995)
T ss_dssp GSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSC
T ss_pred chHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999888888887765432323233344666556678889999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCc
Q psy886 432 EGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGST 511 (962)
Q Consensus 432 ~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (962)
|+||++++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|++++..+..++......++.+++.+
T Consensus 310 ~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (995)
T 3ar4_A 310 EGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGST 389 (995)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSS
T ss_pred cchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999998865432211112245567778
Q ss_pred cccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHH
Q psy886 512 YEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQA 591 (962)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 591 (962)
++|.+....++........+.+..++.++++||++.+..+.....++..|||+|.||+.++++.|........+...+..
T Consensus 390 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~ 469 (995)
T 3ar4_A 390 YAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERA 469 (995)
T ss_dssp SSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTST
T ss_pred cCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCcccccccccccccc
Confidence 88876654332222222345677888899999998765433334566789999999999999988622111111111111
Q ss_pred HhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHH
Q psy886 592 IAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILD 671 (962)
Q Consensus 592 ~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 671 (962)
.......+..|+++.++||+|+|||||++++..++.. ...+..+|+|||||.|+++|+++..+++..+++++.++++.+
T Consensus 470 ~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~-~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~ 548 (995)
T 3ar4_A 470 NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSR-AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILS 548 (995)
T ss_dssp THHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCS-CSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHH
T ss_pred ccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCc-cccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHH
Confidence 1111224567999999999999999999998543210 011478999999999999999988888889999999999999
Q ss_pred HHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCC
Q psy886 672 LTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGD 751 (962)
Q Consensus 672 ~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD 751 (962)
..++++.+++|+|||++|||+.+..+......+...+..+|+|++|+|+++++||||+|++++|+.||++||+|||+|||
T Consensus 549 ~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD 628 (995)
T 3ar4_A 549 VIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGD 628 (995)
T ss_dssp HHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCC
Confidence 99998213899999999999876433222222223355678999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCCCCc----------------------------------------------------------ccc
Q psy886 752 NKATAEAICRRIGVFTEEE----------------------------------------------------------DTT 773 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~~~----------------------------------------------------------~~~ 773 (962)
|+.||.+||++|||...+. .++
T Consensus 629 ~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND 708 (995)
T 3ar4_A 629 NKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVND 708 (995)
T ss_dssp CHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGG
T ss_pred CHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchh
Confidence 9999999999999964211 011
Q ss_pred CCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccc
Q psy886 774 GKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEAL 853 (962)
Q Consensus 774 g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl 853 (962)
.+.+++||||||||+|+|+||++||+|+++|||++|++++++||++|+||+|++.|++++|++++++++++.++|+|.||
T Consensus 709 ~~alk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl 788 (995)
T 3ar4_A 709 APALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEAL 788 (995)
T ss_dssp HHHHHHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred HHHHHHCCeEEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchH
Confidence 12346999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHH-H----hhCcccccccccCCCCcCccchh------------HHHHHHHHhhhHH--h---hh--cC-CCcEEEecc
Q psy886 854 IKKI-S----TTNRGKKKKLSYNFLDISLLGPA------------IHYQVDLTGGPDQ--V---YL--SG-LPDSIYYLP 908 (962)
Q Consensus 854 ~~~q-L----~~d~~~a~al~~e~~~~~~m~~p------------~~~~~~~~~~~~~--~---~~--~~-~~~~~~~~~ 908 (962)
+|+| | ++|++|+++|++|||++++|+|| .++++++.|.... . |. .. .... ...
T Consensus 789 ~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~ 866 (995)
T 3ar4_A 789 IPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDG--PGV 866 (995)
T ss_dssp CHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSS--CCC
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccc
Confidence 9999 3 99999999999999999999886 2566666555211 1 10 00 0000 000
Q ss_pred chhhhhccccccCCCCccCCCccccccCccchhhHHHHHHHHHHHHHhhccCC
Q psy886 909 TTVFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEMLNAMNRYGR 961 (962)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~ 961 (962)
.+.++.++.+|......|.+..|..+...+++|++|+++|++|+||+||||++
T Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~ 919 (995)
T 3ar4_A 867 TYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSE 919 (995)
T ss_dssp TTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred ccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhcc
Confidence 01122223344332233432222222234589999999999999999999985
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-108 Score=1038.91 Aligned_cols=673 Identities=30% Similarity=0.442 Sum_probs=543.3
Q ss_pred HHHHhhhhhhccCccccCCCChhH---HHH----HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENV---HIA----STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||+|.+..++....+ ... +..+++++++++++.+.+..........+.|.++++++++++++.+
T Consensus 76 ~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 76 SLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 346678889999999766553322 222 2334444555555444332211111123457788889999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
++++||+|+++++++|+++.|++++|+|||+ +++||+++|+|||+|.|++||+|||||+|++| .++.||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~--~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~--~~l~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGD--KFQINADQLVVGDLVEMKGGDRVPADIRILQA--QGRKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCE--EEEEEHHHCCCCcEEEEcCCceecCCeEEEEe--CCceEEecccCCC
Confidence 9999999999999999999999999999998 79999999999999999999999999999974 3456888888888
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
|.|+.|.+++
T Consensus 232 S~pv~K~~~~---------------------------------------------------------------------- 241 (1034)
T 3ixz_A 232 SEPQTRSPEC---------------------------------------------------------------------- 241 (1034)
T ss_pred CCCeeccCCC----------------------------------------------------------------------
Confidence 8888885431
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
.. ....+++|++|+||.+.+|+++++|++||++
T Consensus 242 --------------------------------------------~~---~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~ 274 (1034)
T 3ixz_A 242 --------------------------------------------TH---ESPLETRNIAFFSTMCLEGTAQGLVVNTGDR 274 (1034)
T ss_pred --------------------------------------------cc---ccccccccceecceeEEeecceEEEEeehhh
Confidence 00 0011345899999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|++|||++++...+.++||+|+++++++.++..++++++++++++++.. +.+| ...+..++++++++|||
T Consensus 275 T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~i~l~v~~iPe 344 (1034)
T 3ixz_A 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI------GYTF----LRAMVFFMAIVVAYVPE 344 (1034)
T ss_pred hHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cchH----HHHHHHHHHHHHheecc
Confidence 9999999999999999999999999999999988888887777665321 2233 34677899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+||++++++++++++||+|+|++||+++++|+||++++||||||||||+|+|+|++++..+..+..+...
T Consensus 345 ~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~---------- 414 (1034)
T 3ixz_A 345 GLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE---------- 414 (1034)
T ss_pred ccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcc----------
Confidence 9999999999999999999999999999999999999999999999999999999999876543221100
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccc---cCceEEecChhHHHHHHHHHHcCCCCcccCCCchhh
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEF---KQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRRE 589 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~---~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 589 (962)
.+.+. . .....+.+..+..++++||++....... ...+...|||+|.|+++++.+.+...
T Consensus 415 ~~~~~------~-~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~---------- 477 (1034)
T 3ixz_A 415 DQSGQ------T-FDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA---------- 477 (1034)
T ss_pred ccccc------c-cCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh----------
Confidence 00000 0 0112345677888899999887643321 12356789999999999998765421
Q ss_pred HHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHH
Q psy886 590 QAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRI 669 (962)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i 669 (962)
...+..|+++.++||+|+||+|++++...+. +++++.+|+|||||.|+++|+++..+++..+++++.++++
T Consensus 478 ------~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~---~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~ 548 (1034)
T 3ixz_A 478 ------MGYRERFPKVCEIPFNSTNKFQLSIHTLEDP---RDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAF 548 (1034)
T ss_pred ------HHHHHhCcceEEeeecCCCceEEEEEEecCC---CCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHH
Confidence 1245678999999999999999988764321 1226789999999999999999988899999999999999
Q ss_pred HHHHHHHhcccchhheeeEEeeeCCCCcccccc-ccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEE
Q psy886 670 LDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVI 748 (962)
Q Consensus 670 ~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~-~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~Mi 748 (962)
.+.+++++ .+|+|||++||+.++..+..... .+....+..|+||+|+|+++|+||||++++++|++||++||+|+|+
T Consensus 549 ~~~~~~~a--~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmi 626 (1034)
T 3ixz_A 549 QTAYLSLG--GLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMV 626 (1034)
T ss_pred HHHHHHHH--hcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEE
Confidence 99999996 89999999999987643211110 0111223458999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCc-------------------------cccCC----------------------------
Q psy886 749 TGDNKATAEAICRRIGVFTEEE-------------------------DTTGK---------------------------- 775 (962)
Q Consensus 749 TGD~~~TA~~IA~~~GI~~~~~-------------------------~~~g~---------------------------- 775 (962)
|||++.||.+||+++||..++. ..+|.
T Consensus 627 TGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~ 706 (1034)
T 3ixz_A 627 TGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQ 706 (1034)
T ss_pred eCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHH
Confidence 9999999999999999964321 01111
Q ss_pred ---------------------------CCCcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHH
Q psy886 776 ---------------------------SYSKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFI 827 (962)
Q Consensus 776 ---------------------------~l~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i 827 (962)
.+++|||||||| +|+|+||++||+|+.||||.+|+.+|++||++|+||+|++
T Consensus 707 ~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i 786 (1034)
T 3ixz_A 707 QKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSI 786 (1034)
T ss_pred HHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 124899999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh
Q psy886 828 RYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 828 ~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p 881 (962)
.|.+++|++++++++++.++++|+||+|+| | +||++|++||++|||++++|+||
T Consensus 787 ~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~ 845 (1034)
T 3ixz_A 787 AYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLR 845 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCC
Confidence 999999999999999999999999999999 3 99999999999999999999876
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-105 Score=1012.22 Aligned_cols=673 Identities=31% Similarity=0.455 Sum_probs=545.1
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH-------HHHHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA-------STNFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..+..+...||+|.+..++....+... +..+++++++++++++.+..........++|.++++++++++++.+
T Consensus 71 ~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 71 ARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 456778889999999876543332222 4455566666666665443111111122357778888999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
++.++++|+++++++|+++.|..++|+|||+ +++||+++|+|||+|.|++||+|||||+|++|+ +++||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~--~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~--~~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGE--KSTINAEFVVAGDLVEVKGGDRIPADLRIISAH--GCKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTE--EEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEE--EEEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEECCE--EEEEEHHHCCcCCEEEECCCCEeeceEEEEeeC--cEEEEcCccCCC
Confidence 9999999999999999999999999999998 899999999999999999999999999999864 467999999999
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
|.|+.|.+++.+
T Consensus 227 S~pv~K~~~~~~-------------------------------------------------------------------- 238 (1028)
T 2zxe_A 227 SEPQTRSPEFSS-------------------------------------------------------------------- 238 (1028)
T ss_dssp CSCEECCSSCCC--------------------------------------------------------------------
T ss_pred CcceecccCCCC--------------------------------------------------------------------
Confidence 999999765300
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
. ...+++|++|+||.+.+|+++++|++||++
T Consensus 239 ---------------------~----------------------------~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~ 269 (1028)
T 2zxe_A 239 ---------------------E----------------------------NPLETRNIAFFSTNCVEGTARGVVVYTGDR 269 (1028)
T ss_dssp ---------------------S----------------------------STTTCSSEECTTCEEEEEEEEEEEEECGGG
T ss_pred ---------------------C----------------------------CcccccceEEeCceEEcceEEEEEEEeccc
Confidence 0 012345999999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|++|||++++.+++.++||+|+.+++++.+++.++++++++++++++.. +.+|.. .+..++++++++|||
T Consensus 270 T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~------~~~~~~----~~~~~i~llv~~iP~ 339 (1028)
T 2zxe_A 270 TVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL------GYSWLE----AVIFLIGIIVANVPE 339 (1028)
T ss_dssp SHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCCHHH----HHHHHHHHHHHHSCT
T ss_pred cHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCcHHH----HHHHHHHHHHHHcCc
Confidence 9999999999999999999999999999999999888888777764321 223433 566788899999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+||+++++++++++++|+|+|++||+++++|+||++++||||||||||+|+|+|++++..+..+..+.. .
T Consensus 340 ~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~----------~ 409 (1028)
T 2zxe_A 340 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTT----------E 409 (1028)
T ss_dssp THHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCC----------T
T ss_pred hHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCC----------C
Confidence 999999999999999999999999999999999999999999999999999999999886543211100 0
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCcccccccc---CceEEecChhHHHHHHHHHHcCCCCcccCCCchhh
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFK---QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRRE 589 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~---~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 589 (962)
.+.+. .. ....+....++.++++||++..+..... ..++..|||+|.|+++++++.+.. .
T Consensus 410 ~~~~~------~~-~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~--------~-- 472 (1028)
T 2zxe_A 410 NQSGA------AF-DKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGS--------V-- 472 (1028)
T ss_dssp TCCSC------CC-CSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSC--------H--
T ss_pred Ccccc------cc-ccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCC--------H--
Confidence 00000 00 0122455677888999998876432211 124568999999999999875321 0
Q ss_pred HHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHH
Q psy886 590 QAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRI 669 (962)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i 669 (962)
...+..|+++.++||+|+||||+++++..+. +++++++|+|||||.|+++|+++..+++..+++++.++++
T Consensus 473 ------~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~---~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~ 543 (1028)
T 2zxe_A 473 ------QGMRDRNPKIVEIPFNSTNKYQLSIHENEKS---SESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAF 543 (1028)
T ss_dssp ------HHHHHHSCEEEEECCCTTTCEEEEEEECSCT---TTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHH
T ss_pred ------HHHHHhCceEEEeccCcccceEEEEEeccCC---CCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHH
Confidence 1235678999999999999999999985321 1225789999999999999999888888899999999999
Q ss_pred HHHHHHHhcccchhheeeEEeeeCCCCcccccc-ccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEE
Q psy886 670 LDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL-ADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVI 748 (962)
Q Consensus 670 ~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~-~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~Mi 748 (962)
.+..++++ ++|+|||++|||+++.++..... .+.......|+|++|+|+++++||||||++++|++||++||+|||+
T Consensus 544 ~~~~~~~a--~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~mi 621 (1028)
T 2zxe_A 544 QNAYLELG--GLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMV 621 (1028)
T ss_dssp HHHHHHHH--HTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHH--hcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEE
Confidence 99999986 89999999999987643211000 0111122457899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCcc---------------------------------------------------------
Q psy886 749 TGDNKATAEAICRRIGVFTEEED--------------------------------------------------------- 771 (962)
Q Consensus 749 TGD~~~TA~~IA~~~GI~~~~~~--------------------------------------------------------- 771 (962)
||||+.||.+||++|||..++..
T Consensus 622 TGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~ 701 (1028)
T 2zxe_A 622 TGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQ 701 (1028)
T ss_dssp CSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHH
T ss_pred CCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHH
Confidence 99999999999999999743110
Q ss_pred -----------------------ccCCCCCcCcEEEecc-ChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHH
Q psy886 772 -----------------------TTGKSYSKAEIGIAMG-SGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFI 827 (962)
Q Consensus 772 -----------------------~~g~~l~~AdVGIAmg-~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i 827 (962)
++.+.|++|||||||| +|+|+||++||+|++||||++|+++|++||++|+||+|++
T Consensus 702 ~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i 781 (1028)
T 2zxe_A 702 QKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSI 781 (1028)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001125999999999 7999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh
Q psy886 828 RYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA 881 (962)
Q Consensus 828 ~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p 881 (962)
.|.+++|++++++++++.++++|.||+|+| | +||++|+++|++|||++++|+||
T Consensus 782 ~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~ 840 (1028)
T 2zxe_A 782 AYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQ 840 (1028)
T ss_dssp HHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSC
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccC
Confidence 999999999999999999999999999999 3 89999999999999999999885
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-99 Score=930.28 Aligned_cols=656 Identities=24% Similarity=0.326 Sum_probs=501.3
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH--HHHH-HHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA--STNF-AVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVW 116 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 116 (962)
..+..+...||+|.+..++...+.+.. +... .++..+.+++.+. .+.|.++++++++++++.+++.+
T Consensus 91 ~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~----------~g~~~~~~~i~~vv~i~~~i~~~ 160 (920)
T 1mhs_A 91 EEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAG----------LEDWVDFGVICGLLLLNAVVGFV 160 (920)
T ss_dssp HHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTT----------CSCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHhHHHHHHHHHHHHHHHHHHHH
Confidence 346778888999999765544333222 2222 2222222222222 12466777888888999999999
Q ss_pred HHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcce
Q psy886 117 QERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSV 196 (962)
Q Consensus 117 ~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv 196 (962)
+++|+++++++|+++.|.+++|+|||+ +++||+++|+|||+|.|++||+|||||+|++|.+
T Consensus 161 qe~~a~~a~~~L~~l~~~~a~V~RdG~--~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~----------------- 221 (920)
T 1mhs_A 161 QEFQAGSIVDELKKTLALKAVVLRDGT--LKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA----------------- 221 (920)
T ss_dssp HHHHHHHHHHTTTTCCCSSCEEECSSS--EEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS-----------------
T ss_pred HHHHHHHHHHHhhccCCCEEEEEECCE--EEEEEHHHcCCCCEEEeCCCCccccceEEEecCc-----------------
Confidence 999999999999999999999999998 7788888888888888888888888888876422
Q ss_pred eecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEe
Q psy886 197 IKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEV 276 (962)
Q Consensus 197 ~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l 276 (962)
T Consensus 222 -------------------------------------------------------------------------------- 221 (920)
T 1mhs_A 222 -------------------------------------------------------------------------------- 221 (920)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhH
Q psy886 277 SVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIG 356 (962)
Q Consensus 277 ~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~g 356 (962)
.+.||||+|||||.|+.|.++ |++|+||.+.+|+++++|++||.+|++|
T Consensus 222 ------------------~l~VDES~LTGES~PV~K~~g-------------d~v~sGT~v~~G~~~~~V~~tG~~T~~g 270 (920)
T 1mhs_A 222 ------------------FLQVDQSALTGESLAVDKHKG-------------DQVFASSAVKRGEAFVVITATGDNTFVG 270 (920)
T ss_dssp ------------------CCEEBCTTTSSCCCCEECCSS-------------CEECSCBCCSCCCEEEEEEECSTTCSTT
T ss_pred ------------------eeeeeccccCCCCcceEecCC-------------CeeecCceEecceEEEEEEEeCCcCHHH
Confidence 234666666666666666542 6899999999999999999999999999
Q ss_pred HHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHH
Q psy886 357 KIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPA 436 (962)
Q Consensus 357 ki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~ 436 (962)
||++++++++.+++|+|+.+++++.++.++++++++++|+.++ + .+.+| ...+..++++++++|||+||+
T Consensus 271 ~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~--~----~~~~~----~~~l~~av~llV~aiP~aLp~ 340 (920)
T 1mhs_A 271 RAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF--Y----RSNPI----VQILEFTLAITIIGVPVGLPA 340 (920)
T ss_dssp TTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--T----TTCCH----HHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h----cCCcH----HHHHHHHHHHHHHhCchhHHH
Confidence 9999999988899999999999999988887777776665432 1 12233 346778999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCc
Q psy886 437 VITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIG 516 (962)
Q Consensus 437 ~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (962)
+++++++.++.+|+|+|++||+++++|+||++++||||||||||+|+|+|.+++..++ +++
T Consensus 341 ~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-----------------~~~-- 401 (920)
T 1mhs_A 341 VVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-----------------VDP-- 401 (920)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-----------------CCC--
T ss_pred HHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-----------------CCH--
Confidence 9999999999999999999999999999999999999999999999999987754221 000
Q ss_pred ceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhh
Q psy886 517 DVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQ 596 (962)
Q Consensus 517 ~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~ 596 (962)
+ +++..+++|++... ..+||+|.|++.++.+.+...
T Consensus 402 --------------~---~ll~~a~l~~~~~~----------~~~~P~e~Al~~~~~~~~~~~----------------- 437 (920)
T 1mhs_A 402 --------------E---DLMLTACLAASRKK----------KGIDAIDKAFLKSLKYYPRAK----------------- 437 (920)
T ss_dssp --------------T---HHHHHHHHSCCCSS----------CSCCSHHHHHHHHHHHSSSCC-----------------
T ss_pred --------------H---HHHHHHHHhcCCcc----------cCCChHHHHHHHHHHhcccch-----------------
Confidence 1 23345667775321 014999999999988765311
Q ss_pred HHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHH
Q psy886 597 DVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQY 676 (962)
Q Consensus 597 ~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~ 676 (962)
.....|+++.++||+|.||+|+++++..+ ++.++|+|||||.++++|+. ..+++++.++.+.+..+++
T Consensus 438 ~~~~~~~~~~~~pF~s~~k~ms~iv~~~~------g~~~~~~KGape~il~~c~~------~~~~~~~~~~~~~~~~~~~ 505 (920)
T 1mhs_A 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQ------GERITCVKGAPLFVLKTVEE------DHPIPEEVDQAYKNKVAEF 505 (920)
T ss_dssp GGGSCCCEEEEEEEETTTTEEEEEECCSS------SSCEEEEEECHHHHHHHCCC------SSCCCHHHHHHHHHHHHHH
T ss_pred hhccccceeEEeeccCCCCeEEEEEEeCC------CcEEEEEeCCHHHHHHhccc------cCCCCHHHHHHHHHHHHHH
Confidence 02345788999999999999999987532 15688999999999999974 2346777788888888888
Q ss_pred hcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy886 677 GTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATA 756 (962)
Q Consensus 677 ~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA 756 (962)
+ ++|+||+++||+.. |.+++|+|+++++||||||++++|++||++||+|+|+||||+.||
T Consensus 506 a--~~G~RvL~vA~~~~------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA 565 (920)
T 1mhs_A 506 A--TRGFRSLGVARKRG------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIA 565 (920)
T ss_dssp H--TSSCCCCEECCCSS------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHH
T ss_pred H--hCCCEEEEEEEecc------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHH
Confidence 6 89999999998731 468899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCC----C----------------------------------------------------ccccCCCCCcC
Q psy886 757 EAICRRIGVFTE----E----------------------------------------------------EDTTGKSYSKA 780 (962)
Q Consensus 757 ~~IA~~~GI~~~----~----------------------------------------------------~~~~g~~l~~A 780 (962)
.+||+++||... + +.++.+.|++|
T Consensus 566 ~aIA~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~A 645 (920)
T 1mhs_A 566 RETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKA 645 (920)
T ss_dssp HHHHHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHS
T ss_pred HHHHHHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhC
Confidence 999999999521 0 00111123599
Q ss_pred cEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHhCCCccchhHH-H
Q psy886 781 EIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVV-SIFLTAALGLPEALIKKI-S 858 (962)
Q Consensus 781 dVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~-~~~~~~~~~~~~pl~~~q-L 858 (962)
|||||||+|||+||++||+||+||||++|++++++||++|+||+|++.|.++.|+.+.+ +.+++.++++| |+|+| |
T Consensus 646 dvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~--l~~~~il 723 (920)
T 1mhs_A 646 DTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRS--LNIELVV 723 (920)
T ss_dssp SEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCC--CCHHHHH
T ss_pred CcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998743 33334455554 88888 3
Q ss_pred ----hhCcccccccccCCCCcCccchh-----HHHHHHHHhhhHHhhhcCCCcEEEeccchhhhhccccccCCCCccCCC
Q psy886 859 ----TTNRGKKKKLSYNFLDISLLGPA-----IHYQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDEFKGL 929 (962)
Q Consensus 859 ----~~d~~~a~al~~e~~~~~~m~~p-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (962)
++|. |+++|++||++++-..|+ ++++.++.|....+.. ...|. ..+ ..+. .. +.
T Consensus 724 ~~~l~~d~-~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~----~~~~~-----~~~--~~~~--~~---~~ 786 (920)
T 1mhs_A 724 FIAIFADV-ATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGT----WITVT-----TMY--AQGE--NG---GI 786 (920)
T ss_dssp HHHHHHTT-HHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHH----HHHHH-----HHT--TTTT--TC---CS
T ss_pred HHHHHHHH-HhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHH----HHHHH-----HHH--Hhcc--cc---cc
Confidence 7776 999999999988743333 2333333443222110 00010 000 0000 00 00
Q ss_pred ccccccCccchhhHHHHHHHHHHHHHhhccCCC
Q psy886 930 DCHIFHDPHPMTMALSVLVTIEMLNAMNRYGRH 962 (962)
Q Consensus 930 ~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~ 962 (962)
......++|++|++++++|+||+||+|+.+
T Consensus 787 ---~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~ 816 (920)
T 1mhs_A 787 ---VQNFGNMDEVLFLQISLTENWLIFITRANG 816 (920)
T ss_dssp ---SSSSSSHHHHHHHHHHHHHHHHTTSSSCSS
T ss_pred ---cchhhHHHHHHHHHHHHHHHHHHHHhccch
Confidence 011235789999999999999999999863
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-97 Score=908.06 Aligned_cols=609 Identities=26% Similarity=0.359 Sum_probs=461.0
Q ss_pred HHHHhhhhhhccCccccCCCChhHHHH--HH----HHHHHHHHHHHHHHhhhccccccccccchhHHHHHHHHHHHHHHH
Q psy886 40 CRLRLRQIDFIPARVTSLSPSENVHIA--ST----NFAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIV 113 (962)
Q Consensus 40 ~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 113 (962)
..+..+...||+|.+..++.....+.. +. .++.++++++++++.. .+....|.+++.++++++++.++
T Consensus 36 ~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~------~~~~~~~~~~~~I~~~v~i~~~l 109 (885)
T 3b8c_A 36 QEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANG------DGRPPDWQDFVGIICLLVINSTI 109 (885)
T ss_dssp HHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCC------TTSCSCCTTHHHHHHHTTTTTTT
T ss_pred HHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccccccHHHHHHHHHHHHHHHHH
Confidence 457788889999999776643322221 22 2333333333222110 01123577788888888999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 114 GVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 114 ~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
+.++++|+++++++|+++.|++++|+|||+ +++||+++|+|||+|.|++||+|||||+|++|++
T Consensus 110 ~~~qe~ka~~al~~L~~~~~~~a~V~RdG~--~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~-------------- 173 (885)
T 3b8c_A 110 SFIEENNAGNAAAALMAGLAPKTKVLRDGK--WSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP-------------- 173 (885)
T ss_dssp TTTTTTTTTTHHHHTTTSCSCCCCCCCSSC--SCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC--------------
T ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc--------------
Confidence 999999999999999999999999999998 6788888888888888888888888888885322
Q ss_pred cceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCE
Q psy886 194 VSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDI 273 (962)
Q Consensus 194 ~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDI 273 (962)
T Consensus 174 -------------------------------------------------------------------------------- 173 (885)
T 3b8c_A 174 -------------------------------------------------------------------------------- 173 (885)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccch
Q psy886 274 VEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNT 353 (962)
Q Consensus 274 V~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T 353 (962)
+.||||+|||||.|+.|.++ |++|+||.+.+|+++++|++||.+|
T Consensus 174 ----------------------l~VdES~LTGES~Pv~K~~g-------------~~v~~GT~v~~G~~~~~V~~tG~~T 218 (885)
T 3b8c_A 174 ----------------------LKVDQSALTGESLPVTKHPG-------------QEVFSGSTCKQGEIEAVVIATGVHT 218 (885)
T ss_dssp ----------------------BCCCCCSTTCCSSCCCBSSC-------------CCCCSCCCCCSCCCCCBCCSCTTTT
T ss_pred ----------------------ccccccccCCCCcceEecCC-------------CccccCeEEeeeEEEEEEEEcCccc
Confidence 23555555555555555432 5799999999999999999999999
Q ss_pred hhHHHHhhccccccCCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 354 AIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKV-ISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 354 ~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
++|||++++++ ..+++|+|+.++++++++..+ ++.++++++++++ + .+.+|.. .+..++++++++|||
T Consensus 219 ~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~----~~~~~v~llv~aiP~ 287 (885)
T 3b8c_A 219 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYP--I----QRRKYRD----GIDNLLVLLIGGIPI 287 (885)
T ss_dssp TSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTT--T----TCSCSTT----HHHHHHHHTTTTCCS
T ss_pred HHHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H----ccCcHHH----HHHHHHHHHHHHhhh
Confidence 99999998877 578999999999999875432 2223332222211 1 1223433 467899999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+||+++++++++++.+|+|+|++||+++++|+||++++||||||||||+|+|+|.+.+.. .+ +.+
T Consensus 288 aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~------------~~~- 352 (885)
T 3b8c_A 288 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF------------CKG- 352 (885)
T ss_dssp STTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS------------CSS-
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc------------CCC-
Confidence 999999999999999999999999999999999999999999999999999998542210 00 000
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHH
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAI 592 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~ 592 (962)
.+. .+++..+++|++.. .+||+|.|++.++.+..
T Consensus 353 ---------------~~~---~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~~---------------- 386 (885)
T 3b8c_A 353 ---------------VEK---DQVLLFAAMASRVE------------NQDAIDAAMVGMLADPK---------------- 386 (885)
T ss_dssp ---------------TTH---HHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCTT----------------
T ss_pred ---------------CCH---HHHHHHHHHHhCCC------------CCCchHHHHHHHhhchh----------------
Confidence 011 23455667787531 37899999998654210
Q ss_pred hhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 593 AVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 593 ~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
..+..|+++.++||+|.||||+++++..+ ++.++|+|||||.++++|+.. ++.++.+.+.
T Consensus 387 ----~~~~~~~~~~~~pF~s~~k~~sv~~~~~~------g~~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~ 446 (885)
T 3b8c_A 387 ----EARAGIREVHFLPFNPVDKRTALTYIDGS------GNWHRVSKGAPEQILELAKAS----------NDLSKKVLSI 446 (885)
T ss_dssp ----CCCCSSCCBCCCCCCTTTCCCCCBBCSSS------SCBCBCCCCSGGGTSSSSCCC----------STTTTTHHHH
T ss_pred ----hHhhcCceeecccCCcccceEEEEEEecC------CcEEEEEeCCHHHHHHhccCc----------hhhHHHHHHH
Confidence 01235778889999999999998876422 145788999999999999731 1123345666
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.++++ ++|+|++++|+++.+..+ .+..|++++|+|+++++||||||++++|++||++||+|+|+||||
T Consensus 447 ~~~~a--~~G~rvl~vA~~~~~~~~----------~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~ 514 (885)
T 3b8c_A 447 IDKYA--ERGLRSLAVARQVVPEKT----------KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 514 (885)
T ss_dssp HHHHT--TTTCEEEEECCBCCCSSS----------SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSC
T ss_pred HHHHH--hCCCeEEEEEEecccccc----------ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCC
Confidence 77775 899999999999775421 123578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCC---Ccc------------------------------------------------------ccCC
Q psy886 753 KATAEAICRRIGVFTE---EED------------------------------------------------------TTGK 775 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~~---~~~------------------------------------------------------~~g~ 775 (962)
+.||.+||+++||..+ +.. ++.+
T Consensus 515 ~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDap 594 (885)
T 3b8c_A 515 LAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAP 594 (885)
T ss_dssp HHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHH
T ss_pred hHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHH
Confidence 9999999999999531 011 1111
Q ss_pred CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchh
Q psy886 776 SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIK 855 (962)
Q Consensus 776 ~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~ 855 (962)
.|++||||||||+|+|+||++||+||+||||++|+++|++||++|+|||||+.|++++|+++++.++++. +++|.||+|
T Consensus 595 aLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~-~~~~~~l~p 673 (885)
T 3b8c_A 595 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFSA 673 (885)
T ss_dssp HHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHH-SSCSSCSCH
T ss_pred HHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCcCcCH
Confidence 2359999999999999999999999999999999999999999999999999999999998766555444 478899999
Q ss_pred HH-H----hhCcccccccccCCCCcCccchh-----HHHHHHHHhh
Q psy886 856 KI-S----TTNRGKKKKLSYNFLDISLLGPA-----IHYQVDLTGG 891 (962)
Q Consensus 856 ~q-L----~~d~~~a~al~~e~~~~~~m~~p-----~~~~~~~~~~ 891 (962)
+| + ++|+.+ +++++|++++.-..++ ++++.++.|.
T Consensus 674 ~~il~i~l~~d~~~-l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~ 718 (885)
T 3b8c_A 674 FMVLIIAILNDGTI-MTISKDRVKPSPTPDSWKLKEIFATGVVLGG 718 (885)
T ss_dssp HHHHHHHHHHHTTT-CCCCCCCCCCSSCCCSTTTTTTTTTHHHHHS
T ss_pred HHHHHHHHHHHHHH-HhhcccccCcccCCcchhHHHHHHHHHHHHH
Confidence 99 3 778776 9999999988633222 3445555565
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-79 Score=738.99 Aligned_cols=540 Identities=19% Similarity=0.238 Sum_probs=439.2
Q ss_pred chhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhcccccc------------ccccchhHHH-
Q psy886 35 TLGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFN------------STLTSFVEPF- 101 (962)
Q Consensus 35 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~- 101 (962)
...|+++++..++.|+.+++|++++|..++.+..+|+.++++.....+.|+.+..+. +....|+++.
T Consensus 113 ~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~ 192 (736)
T 3rfu_A 113 GSSWIQLLLATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAA 192 (736)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHH
Confidence 467999999999999999999999999999888999999998888888776544321 1123455554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEE-CCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecc
Q psy886 102 VILLILIANAIVGVWQERNAESAIEALKEYEPEMGKVIR-GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYST 180 (962)
Q Consensus 102 ~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~r-~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~ 180 (962)
+++++++++++++.++++|+++++++|.++.|++++++| ||+ +++||+++|+|||+|.|++||+|||||+|++|++.
T Consensus 193 ~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~--~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~ 270 (736)
T 3rfu_A 193 VITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGS--EEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF 270 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEE--EEEEETTTCCTTCEECCCSSEECCSCEEECSSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCE--EEEEEHhhCCCCCEEEECCCCcccccEEEEECceE
Confidence 666899999999999999999999999999999999998 776 89999999999999999999999999999965443
Q ss_pred eeeeecccccCCCcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccce
Q psy886 181 TIRIDQSILTGESVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGV 260 (962)
Q Consensus 181 ~~~vdes~lTGEs~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~ 260 (962)
||||+|||||.|+.|.+|
T Consensus 271 ---VDES~LTGES~Pv~K~~g----------------------------------------------------------- 288 (736)
T 3rfu_A 271 ---VDESMVTGEPIPVAKEAS----------------------------------------------------------- 288 (736)
T ss_dssp ---EECSSSTTCSSCEEECTT-----------------------------------------------------------
T ss_pred ---eeecccCCccccEEeccC-----------------------------------------------------------
Confidence 566655555555555322
Q ss_pred eeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeec
Q psy886 261 QKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAG 340 (962)
Q Consensus 261 ~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G 340 (962)
+.+|+||.+.+|
T Consensus 289 --------------------------------------------------------------------d~v~~Gt~~~~G 300 (736)
T 3rfu_A 289 --------------------------------------------------------------------AKVIGATINQTG 300 (736)
T ss_dssp --------------------------------------------------------------------CEECTTCEEESC
T ss_pred --------------------------------------------------------------------CcCCCceEeccc
Confidence 458999999999
Q ss_pred eEEEEEEEeccchhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHH
Q psy886 341 KARGIVMGTGLNTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFK 420 (962)
Q Consensus 341 ~~~~vV~~tG~~T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 420 (962)
+++++|++||.+|.+|||.+++.+++.+++|+|+.+++++.++.+++++++++.+++|+.... ...|. ..+.
T Consensus 301 ~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~----~~~~~----~~l~ 372 (736)
T 3rfu_A 301 SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP----QPALS----YGLI 372 (736)
T ss_dssp CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----SSSTT----HHHH
T ss_pred eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CchHH----HHHH
Confidence 999999999999999999999999999999999999999999999999988888877653211 11232 3577
Q ss_pred HHHHHHHhhcCCchHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCC
Q psy886 421 IAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDS 500 (962)
Q Consensus 421 ~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~ 500 (962)
.++++++++|||+|++++++++..+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 373 ~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~------ 446 (736)
T 3rfu_A 373 AAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF------ 446 (736)
T ss_dssp HHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS------
T ss_pred HHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC------
Confidence 89999999999999999999999999999999999999999999999999999999999999999999873210
Q ss_pred CcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCc
Q psy886 501 SFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNV 580 (962)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~ 580 (962)
+.+.+..+. .+++. ...+|.+.|++.++++.+....
T Consensus 447 ----------------------------~~~~~l~~a--a~le~--------------~s~hPla~Aiv~~a~~~~~~~~ 482 (736)
T 3rfu_A 447 ----------------------------VEDNALALA--AALEH--------------QSEHPLANAIVHAAKEKGLSLG 482 (736)
T ss_dssp ----------------------------CHHHHHHHH--HHHHH--------------SSCCHHHHHHHHHHHTTCCCCC
T ss_pred ----------------------------CHHHHHHHH--HHHhh--------------cCCChHHHHHHHHHHhcCCCcc
Confidence 112222222 22222 1358999999999987654211
Q ss_pred ccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeee
Q psy886 581 SKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFP 660 (962)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~ 660 (962)
...+|++.+++... .... + ..+.+|+++.+.+.+..
T Consensus 483 -------------------------~~~~f~~~~g~gv~-~~~~--------g-~~~~~G~~~~~~~~~~~--------- 518 (736)
T 3rfu_A 483 -------------------------SVEAFEAPTGKGVV-GQVD--------G-HHVAIGNARLMQEHGGD--------- 518 (736)
T ss_dssp -------------------------CCSCCCCCTTTEEE-ECSS--------S-SCEEEESHHHHHHHCCC---------
T ss_pred -------------------------CcccccccCCceEE-EEEC--------C-EEEEEcCHHHHHHcCCC---------
Confidence 12357776665422 2111 1 13568999877654321
Q ss_pred CCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHH
Q psy886 661 LTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRA 740 (962)
Q Consensus 661 l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~ 740 (962)
.+ .+.+..++++ .+|+|++++|+ |.+++|+++++|++|++++++|++||+
T Consensus 519 -~~----~~~~~~~~~~--~~G~~vl~va~-----------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~ 568 (736)
T 3rfu_A 519 -NA----PLFEKADELR--GKGASVMFMAV-----------------------DGKTVALLVVEDPIKSSTPETILELQQ 568 (736)
T ss_dssp -CH----HHHHHHHHHH--HTTCEEEEEEE-----------------------TTEEEEEEEEECCBCSSHHHHHHHHHH
T ss_pred -hh----HHHHHHHHHH--hcCCeEEEEEE-----------------------CCEEEEEEEeeccchhhHHHHHHHHHH
Confidence 11 2334455554 78999999984 457999999999999999999999999
Q ss_pred cCCEEEEEcCCCHHHHHHHHHHcCCCC---------------------------CCccccCCCCCcCcEEEeccChhHHH
Q psy886 741 AGIRVIVITGDNKATAEAICRRIGVFT---------------------------EEEDTTGKSYSKAEIGIAMGSGTAVA 793 (962)
Q Consensus 741 AGI~v~MiTGD~~~TA~~IA~~~GI~~---------------------------~~~~~~g~~l~~AdVGIAmg~gtdvA 793 (962)
+||+++|+|||+..||.++|+++||.. +|+.++.+.+++||||||||+|+|+|
T Consensus 569 ~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a 648 (736)
T 3rfu_A 569 SGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVA 648 (736)
T ss_dssp HTCEEEEECSSCHHHHHHHHHHHTCCCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHH
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHH
Confidence 999999999999999999999999942 12334445568999999999999999
Q ss_pred HhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHH
Q psy886 794 KSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEV 838 (962)
Q Consensus 794 keaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~ 838 (962)
|++||+|+++||+..|++++++||++++|||||+.|++.||+..+
T Consensus 649 ~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~i 693 (736)
T 3rfu_A 649 IESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGV 693 (736)
T ss_dssp HHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997654
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-76 Score=710.76 Aligned_cols=534 Identities=20% Similarity=0.234 Sum_probs=420.7
Q ss_pred hhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccc---cccccchhHHHHHHHHHHHHHH
Q psy886 36 LGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDF---NSTLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 36 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..|+++++..++.++.+++++++++..++.+..+|+++.++.....+.++.+... .+.+.+|..++++++++.++++
T Consensus 32 ~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~ 111 (645)
T 3j08_A 32 EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRT 111 (645)
T ss_dssp CSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCCCSCHHHHHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 5677888889999998999999988888777666665555544444443322111 0111245667788888999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
++.++++|+++++++|.++.|++++|+|||+ +++||+++|+|||+|.|++||+|||||+|++|++. ||||+||||
T Consensus 112 le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~--~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~---VdeS~LTGE 186 (645)
T 3j08_A 112 LEARAKSRTGEAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---VDESMISGE 186 (645)
T ss_dssp HHHHHHCCCCCCCHHHHHTSCSEEEEEETTE--EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEE---EECHHHHCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcEE---EEcccccCC
Confidence 9999999999999999999999999999998 89999999999999999999999999999976443 666666666
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
|.|+.|+
T Consensus 187 S~Pv~K~------------------------------------------------------------------------- 193 (645)
T 3j08_A 187 PVPVLKS------------------------------------------------------------------------- 193 (645)
T ss_dssp SSCEEEC-------------------------------------------------------------------------
T ss_pred CCceecC-------------------------------------------------------------------------
Confidence 6666663
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
++ +.+|+||.+.+|.++++|++||.+
T Consensus 194 -----------------------------------------~g-------------~~v~~Gt~~~~g~~~~~v~~~G~~ 219 (645)
T 3j08_A 194 -----------------------------------------KG-------------DEVFGATINNTGVLKIRATRVGGE 219 (645)
T ss_dssp -----------------------------------------TT-------------CEECTTCEECSSCEEEEEEECGGG
T ss_pred -----------------------------------------CC-------------CEeeccEEEecCcEEEEEEEcCCc
Confidence 21 568999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|.+|||.+++++++.+++|+|+.+++++.++.+++++++++.+++++... +.+|.. .+..++++++++|||
T Consensus 220 T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-----~~~~~~----~~~~~i~vlvia~P~ 290 (645)
T 3j08_A 220 TLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-----HAPLLF----AFTTLIAVLVVACPC 290 (645)
T ss_dssp SHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC-----SCSCCC----TTTTTHHHHHHHSCT
T ss_pred cHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcHHH----HHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999988888888877653221 112222 356789999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+|++++++++..++.+++|+|++||+++++|+||++++||||||||||+|+|+|.+++..+.
T Consensus 291 aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------ 352 (645)
T 3j08_A 291 AFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------------------ 352 (645)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC------------------
Confidence 99999999999999999999999999999999999999999999999999999999876431
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHH
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAI 592 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~ 592 (962)
+.+++. ..++.|.. ...+|.+.|++.++.+.|.......
T Consensus 353 ----------------~~~~~l---~~aa~~e~-------------~s~hPla~Aiv~~a~~~g~~~~~~~--------- 391 (645)
T 3j08_A 353 ----------------DERELL---RLAAIAER-------------RSEHPIAEAIVKKALEHGIELGEPE--------- 391 (645)
T ss_dssp ----------------CHHHHH---HHHHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCSCC---------
T ss_pred ----------------CHHHHH---HHHHHHhh-------------cCCChhHHHHHHHHHhcCCCcCCcc---------
Confidence 112222 22233321 1358999999999988765321110
Q ss_pred hhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 593 AVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 593 ~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
+|++...+- +.. ..+.+|+++.+.+... +..+ .+.+.
T Consensus 392 ----------------~~~~~~g~g-~~~-------------~~v~~g~~~~~~~~~~---------~~~~----~~~~~ 428 (645)
T 3j08_A 392 ----------------KVEVIAGEG-VVA-------------DGILVGNKRLMEDFGV---------AVSN----EVELA 428 (645)
T ss_dssp ----------------CCEEETTTE-EEE-------------TTEEEECHHHHHHTTC---------CCCH----HHHHH
T ss_pred ----------------ceEEecCCc-eEE-------------EEEEECCHHHHHhcCC---------CccH----HHHHH
Confidence 111111100 000 1246788776544321 1222 23444
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.+++. .+|+|++.+|+ |++++|+++++|++||+++++|++||++||+++|+|||+
T Consensus 429 ~~~~~--~~g~~~l~va~-----------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~ 483 (645)
T 3j08_A 429 LEKLE--REAKTAVIVAR-----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDN 483 (645)
T ss_dssp HHHHH--TTTCCCEEEEE-----------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHH--hcCCeEEEEEE-----------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence 55554 78999998874 568999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCC--------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCCh
Q psy886 753 KATAEAICRRIGVFT--------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~--------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f 806 (962)
..+|.++|+++||.. +|+.++.+.+++||||||||+|+|+||++||+|+++||+
T Consensus 484 ~~~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~ 563 (645)
T 3j08_A 484 WRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDL 563 (645)
T ss_dssp HHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTTCCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCT
T ss_pred HHHHHHHHHHcCCCEEEEeCCHHhHHHHHHHHhhCCeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCH
Confidence 999999999999842 112223334579999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhHHH
Q psy886 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGE 837 (962)
Q Consensus 807 ~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~ 837 (962)
..+++++++||++|+|||||+.|++++|+..
T Consensus 564 ~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~ 594 (645)
T 3j08_A 564 RDVVAAIQLSRKTMSKIKQNIFWALIYNVIL 594 (645)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999763
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-76 Score=715.67 Aligned_cols=535 Identities=20% Similarity=0.237 Sum_probs=420.6
Q ss_pred hhHHHHHHhhhhhhccCccccCCCChhHHHHHHHHHHHHHHHHHHHHhhhcccccc---ccccchhHHHHHHHHHHHHHH
Q psy886 36 LGAFCRLRLRQIDFIPARVTSLSPSENVHIASTNFAVLFCLCPQVLALFEEHEDFN---STLTSFVEPFVILLILIANAI 112 (962)
Q Consensus 36 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~ 112 (962)
..|+++++..++.++.+++++++++..++.+..+|++++++.....+.++.+.... +.+.+|..++++++++.++++
T Consensus 110 ~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~ 189 (723)
T 3j09_A 110 EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRT 189 (723)
T ss_dssp SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHHHHHHHHHTTTTCCCCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHH
Confidence 45677788888888888888888888887776666665555544444443221110 111246667778888999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCC
Q psy886 113 VGVWQERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGE 192 (962)
Q Consensus 113 ~~~~~~~~~~~~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGE 192 (962)
++.++++|+++++++|.++.|++++|+|||+ +++||+++|+|||+|.|++||+|||||+|++|++. ||||+||||
T Consensus 190 le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~--~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~---VdeS~LTGE 264 (723)
T 3j09_A 190 LEARAKSRTGEAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---VDESMISGE 264 (723)
T ss_dssp HHHHHHTTCCCTTHHHHHTSCSEEEEEETTE--EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEE---EECHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeE---EecccccCC
Confidence 9999999999999999999999999999998 89999999999999999999999999999976443 666666666
Q ss_pred CcceeecCCCCCCcccccCCCccccccCccccccchhHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCC
Q psy886 193 SVSVIKHTDAVPDPRAEKNGPQMCENDRNEHKCGRMVQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGD 272 (962)
Q Consensus 193 s~Pv~k~~g~~~~~~~~~~~~~~~~~~~~~~~~gr~~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GD 272 (962)
|.|+.|.
T Consensus 265 S~pv~K~------------------------------------------------------------------------- 271 (723)
T 3j09_A 265 PVPVLKS------------------------------------------------------------------------- 271 (723)
T ss_dssp SSCEEEC-------------------------------------------------------------------------
T ss_pred Ccceeec-------------------------------------------------------------------------
Confidence 6666663
Q ss_pred EEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccc
Q psy886 273 IVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLN 352 (962)
Q Consensus 273 IV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~ 352 (962)
++ +.+|+||.+.+|.++++|++||.+
T Consensus 272 -----------------------------------------~g-------------~~v~~Gt~~~~g~~~~~v~~~g~~ 297 (723)
T 3j09_A 272 -----------------------------------------KG-------------DEVFGATINNTGVLKIRATRVGGE 297 (723)
T ss_dssp -----------------------------------------TT-------------CEECTTCEECSSCEEEEEEECGGG
T ss_pred -----------------------------------------CC-------------CeeccceEEecCcEEEEEEEecCc
Confidence 21 568999999999999999999999
Q ss_pred hhhHHHHhhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCC
Q psy886 353 TAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPE 432 (962)
Q Consensus 353 T~~gki~~~~~~~~~~~tplq~~l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~ 432 (962)
|.+|||.+++++++.+++|+|+.+++++.++++++++++++.+++|+... +.+|.. .+..++++++++|||
T Consensus 298 T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-----~~~~~~----~~~~~i~vlvia~P~ 368 (723)
T 3j09_A 298 TLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-----HAPLLF----AFTTLIAVLVVACPC 368 (723)
T ss_dssp SHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST-----TCTTCC----SHHHHHHHHHHHSCT
T ss_pred cHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcHHH----HHHHHHHHHHhhhhH
Confidence 99999999999999999999999999999999988888888776543211 112222 367789999999999
Q ss_pred chHHHHHHHHHHHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCcc
Q psy886 433 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTY 512 (962)
Q Consensus 433 ~Lp~~v~i~l~~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (962)
+|++++++++..++.+++|+|++||+++++|+||++++||||||||||+|+|+|.+++..+.
T Consensus 369 aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~------------------ 430 (723)
T 3j09_A 369 AFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------------------ 430 (723)
T ss_dssp THHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC------------------
Confidence 99999999999999999999999999999999999999999999999999999999876431
Q ss_pred ccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHH
Q psy886 513 EPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAI 592 (962)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~ 592 (962)
+.+.+.. .++.+.. ...+|.+.|++.++.+.+.......
T Consensus 431 ----------------~~~~~l~---~aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~~~--------- 469 (723)
T 3j09_A 431 ----------------DERELLR---LAAIAER-------------RSEHPIAEAIVKKALEHGIELGEPE--------- 469 (723)
T ss_dssp ----------------CHHHHHH---HHHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCSCC---------
T ss_pred ----------------CHHHHHH---HHHHHhc-------------cCCCchhHHHHHHHHhcCCCcCCcc---------
Confidence 1122222 2222221 1358999999999988765321100
Q ss_pred hhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHH
Q psy886 593 AVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDL 672 (962)
Q Consensus 593 ~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 672 (962)
+|++...+- +.. ..+.+|+++.+.+... +..+ .+.+.
T Consensus 470 ----------------~~~~~~g~g-~~~-------------~~~~~g~~~~~~~~~~---------~~~~----~~~~~ 506 (723)
T 3j09_A 470 ----------------KVEVIAGEG-VVA-------------DGILVGNKRLMEDFGV---------AVSN----EVELA 506 (723)
T ss_dssp ----------------CCEEETTTE-EEE-------------TTEEEECHHHHHHTTC---------CCCH----HHHHH
T ss_pred ----------------ceEEecCCc-eEE-------------EEEEECCHHHHHhcCC---------CccH----HHHHH
Confidence 111111000 000 1246788776554321 1222 33444
Q ss_pred HHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCC
Q psy886 673 TRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDN 752 (962)
Q Consensus 673 ~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~ 752 (962)
.++++ .+|+|++.+|+ |++|+|+++++|++||+++++|++||++||+++|+|||+
T Consensus 507 ~~~~~--~~g~~~~~va~-----------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~ 561 (723)
T 3j09_A 507 LEKLE--REAKTAVIVAR-----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDN 561 (723)
T ss_dssp HHHHH--TTTCEEEEEEE-----------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHHH--hcCCeEEEEEE-----------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCC
Confidence 55554 78999999874 568999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCC--------------------------CCccccCCCCCcCcEEEeccChhHHHHhhcccccccCCh
Q psy886 753 KATAEAICRRIGVFT--------------------------EEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~--------------------------~~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f 806 (962)
..||.++|+++||.. +|+.++.+.+++||||||||+|+|+||++||+|+++||+
T Consensus 562 ~~~a~~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~ 641 (723)
T 3j09_A 562 WRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDL 641 (723)
T ss_dssp HHHHHHHHHHHTCSEEECSCCTTCHHHHHHHHTTTCCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCT
T ss_pred HHHHHHHHHHcCCcEEEccCCHHHHHHHHHHHhcCCeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCH
Confidence 999999999999842 112233345679999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHH
Q psy886 807 SSIVAAVEEGRAIYNNMKQFIRYLISSNIGEV 838 (962)
Q Consensus 807 ~~iv~ai~~gR~i~~ni~k~i~~~l~~ni~~~ 838 (962)
..|++++++||++|+||+||+.|++++|+..+
T Consensus 642 ~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i 673 (723)
T 3j09_A 642 RDVVAAIQLSRKTMSKIKQNIFWALIYNVILI 673 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998643
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=210.34 Aligned_cols=111 Identities=29% Similarity=0.389 Sum_probs=103.6
Q ss_pred HHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCC
Q psy886 237 SAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDA 316 (962)
Q Consensus 237 ~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~ 316 (962)
+++++|+++.|++++|+|+|+ +++|++++|+|||+|.+++||+|||||+++++ .+.||||+|||||.|+.|.++
T Consensus 1 ~al~~L~~l~p~~a~v~r~g~--~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g---~~~vdeS~LTGEs~pv~k~~g- 74 (113)
T 2hc8_A 1 EAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG---ESYVDESMISGEPVPVLKSKG- 74 (113)
T ss_dssp CHHHHHHHHSCSEEEEEETTE--EEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC---CEEEECHHHHCCSSCEEECTT-
T ss_pred CHHHHHhcCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc---eEEEEccccCCCCccEEECCC-
Confidence 368899999999999999997 78999999999999999999999999999964 579999999999999999874
Q ss_pred CCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhcccc
Q psy886 317 VPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSET 365 (962)
Q Consensus 317 ~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~ 365 (962)
+.+|+||.+.+|.++++|++||.+|.+|+|.++++++
T Consensus 75 ------------~~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 75 ------------DEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp ------------CEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred ------------CEEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 7899999999999999999999999999999988654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=214.37 Aligned_cols=118 Identities=23% Similarity=0.338 Sum_probs=105.2
Q ss_pred HHhHHHHHHHHHhcCCccceeeeCCccc----eeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCC
Q psy886 232 ERNAESAIEALKEYEPEMGKVIRGDKSG----VQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 307 (962)
Q Consensus 232 e~ra~~~l~~L~~~~~~~a~ViR~g~~~----~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs 307 (962)
++||++++++|+++.|++++|+|+|+.. +++|++++|+|||+|.+++||+|||||+|++++ ..||||+|||||
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~---~~vdeS~LTGEs 78 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH---SMVDESLITGEA 78 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC---CEEECTTTTCCS
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc---EEEEeccccCCC
Confidence 6899999999999999999999987532 578999999999999999999999999999643 479999999999
Q ss_pred cceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHHhhcccc
Q psy886 308 VSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEMSET 365 (962)
Q Consensus 308 ~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~~~~ 365 (962)
.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++.++
T Consensus 79 ~pv~k~~g-------------~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 79 MPVAKKPG-------------STVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp SCEECCTT-------------EEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred ccEEeCCC-------------CEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 99999864 8999999999999999999999999999999998764
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=7.6e-24 Score=227.67 Aligned_cols=114 Identities=15% Similarity=0.435 Sum_probs=100.1
Q ss_pred CCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC------------------------
Q psy886 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE------------------------ 768 (962)
Q Consensus 713 ~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~------------------------ 768 (962)
.+-.+.|.+.+.|+++|+++++++.|++.|++++|+|||+..++..+++++||..-
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p~~k~~~~~~l~~~~~~~~ 202 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNKVL 202 (263)
Confidence 34568899999999999999999999999999999999999999999999998420
Q ss_pred ---CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHH
Q psy886 769 ---EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQF 826 (962)
Q Consensus 769 ---~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~ 826 (962)
|...+...+++|++||+||.+++.+++.||++++++++..++.+++++|+++++||+|
T Consensus 203 ~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 203 MIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 1111222346999999999999999999999999999999999999999999999986
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.7e-20 Score=183.30 Aligned_cols=134 Identities=23% Similarity=0.383 Sum_probs=109.9
Q ss_pred ecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEe
Q psy886 560 VGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVK 639 (962)
Q Consensus 560 ~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~K 639 (962)
.+||+|.|++.++.+.+. ...+..|+++.++||||+||||+++++..+ ++.++|+|
T Consensus 32 ~~n~~d~Ail~~~~~~~~------------------~~~~~~~~~~~eiPFds~rKrmsvv~~~~~------g~~~l~~K 87 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEESA------------------RSLASRWQKIDEIPFDFERRRMSVVVAENT------EHHQLVCK 87 (170)
T ss_dssp CCCHHHHHHHHTSCHHHH------------------HHHHHHSEEEEEECCCTTTCEEEEEEESSS------SEEEEEEE
T ss_pred CCChHHHHHHHHHHhcCh------------------hhhhhcCeEEeeEecCcccCcEEEEEEeCC------CCEEEEEc
Confidence 479999999987643210 124567999999999999999999997532 15789999
Q ss_pred CChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEE
Q psy886 640 GAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVG 719 (962)
Q Consensus 640 GA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG 719 (962)
||||.|+++|+.+..+++..+++++.++++.+.+++|+ ++|+|||++|||+++..+... ....|+||+|+|
T Consensus 88 GApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la--~~GlRvLavA~k~~~~~~~~~-------~~~~E~~L~f~G 158 (170)
T 3gwi_A 88 GALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLN--RQGLRVVAVATKYLPAREGDY-------QRADESDLILEG 158 (170)
T ss_dssp ECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHH--HTTCEEEEEEEEEEECCSSCC-------CGGGSCSEEEEE
T ss_pred CCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEEEEECCCCcccc-------CccccCCcEEEe
Confidence 99999999999998899999999999999999999996 999999999999886543211 123489999999
Q ss_pred EecccCC
Q psy886 720 VVGMLDP 726 (962)
Q Consensus 720 l~~i~D~ 726 (962)
++||-|.
T Consensus 159 ~~g~~~~ 165 (170)
T 3gwi_A 159 YIAFLDH 165 (170)
T ss_dssp EEEEEC-
T ss_pred hhccccc
Confidence 9999885
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-19 Score=164.81 Aligned_cols=75 Identities=36% Similarity=0.487 Sum_probs=69.9
Q ss_pred HHHHHhccCCCeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCC
Q psy886 124 AIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAV 203 (962)
Q Consensus 124 ~l~~l~~~~~~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~ 203 (962)
++++|.++.|..++|+|+|+ +++||+++|+|||+|.|++||+|||||+|++|.+ .||||+|||||.|+.|.+|+.
T Consensus 2 al~~L~~l~p~~a~v~r~g~--~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~---~vdeS~LTGEs~pv~k~~g~~ 76 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES---YVDESMISGEPVPVLKSKGDE 76 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTE--EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE---EEECHHHHCCSSCEEECTTCE
T ss_pred HHHHHhcCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE---EEEccccCCCCccEEECCCCE
Confidence 57888999999999999998 8999999999999999999999999999998754 599999999999999999864
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-19 Score=167.43 Aligned_cols=83 Identities=27% Similarity=0.410 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHhccCCCeEEEEECCCc----cEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCC
Q psy886 118 ERNAESAIEALKEYEPEMGKVIRGDKS----GVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193 (962)
Q Consensus 118 ~~~~~~~l~~l~~~~~~~~~v~r~~~~----~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs 193 (962)
++|+++++++|.++.|..++|+|+|.. .+++||+++|+|||+|.|++||+|||||+|++|.+. ||||+|||||
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~---vdeS~LTGEs 78 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSM---VDESLITGEA 78 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCE---EECTTTTCCS
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEE---EEeccccCCC
Confidence 568889999999999999999997642 157899999999999999999999999999987664 9999999999
Q ss_pred cceeecCCCC
Q psy886 194 VSVIKHTDAV 203 (962)
Q Consensus 194 ~Pv~k~~g~~ 203 (962)
.|+.|.+|+.
T Consensus 79 ~pv~k~~g~~ 88 (124)
T 2kij_A 79 MPVAKKPGST 88 (124)
T ss_dssp SCEECCTTEE
T ss_pred ccEEeCCCCE
Confidence 9999999864
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=182.47 Aligned_cols=254 Identities=22% Similarity=0.310 Sum_probs=165.8
Q ss_pred HHHHHHhhhcCccCCchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCC
Q psy886 444 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGS 523 (962)
Q Consensus 444 ~~~~~m~k~~ilvr~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (962)
-|.++++|+|+++|++.++|+++++++||||||||||.+++.+.+++..++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------------------------- 58 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------------------- 58 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-----------------------------
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-----------------------------
Confidence 367899999999999999999999999999999999999999988765421
Q ss_pred ccCCCChHHHHHHHHHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhce
Q psy886 524 KIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWK 603 (962)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (962)
+.+.+..+. .++ +. ...+|...|+..++++.|+..... ..+.
T Consensus 59 -----~~~~~l~~~--~~~------e~--------~s~hp~~~a~~~~~~~~g~~~~~~-----------------~~~~ 100 (287)
T 3a1c_A 59 -----DERELLRLA--AIA------ER--------RSEHPIAEAIVKKALEHGIELGEP-----------------EKVE 100 (287)
T ss_dssp -----CHHHHHHHH--HHH------TT--------TCCSHHHHHHHHHHHHTTCCCCCC-----------------SCEE
T ss_pred -----CHHHHHHHH--HHH------hh--------cCCCHHHHHHHHHHHhcCCCcccc-----------------ccce
Confidence 012222221 111 10 136799999999988877532110 0000
Q ss_pred eeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchh
Q psy886 604 KEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTL 683 (962)
Q Consensus 604 ~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~gl 683 (962)
. ++ .+.+. . ..+.+|.++.+-+.+. +.++. +.+..+.+. .+|.
T Consensus 101 ~---~~----G~~~~--------------~-~~~~~g~~~~~~~~~~---------~~~~~----~~~~~~~~~--~~g~ 143 (287)
T 3a1c_A 101 V---IA----GEGVV--------------A-DGILVGNKRLMEDFGV---------AVSNE----VELALEKLE--REAK 143 (287)
T ss_dssp E---ET----TTEEE--------------E-TTEEEECHHHHHHTTC---------CCCHH----HHHHHHHHH--HTTC
T ss_pred e---ec----CCCeE--------------E-EEEEECCHHHHHhcCC---------CccHH----HHHHHHHHH--hCCC
Confidence 0 00 00000 0 0134565544332211 11111 223334443 5688
Q ss_pred heeeEEeeeCCCCccccccccccccccccCCeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy886 684 RCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRI 763 (962)
Q Consensus 684 Rvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~ 763 (962)
+++++++ +..+++.+...++++|+++++++.|+++|+++.++||+....+..+.+.+
T Consensus 144 ~~i~~~~-----------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~ 200 (287)
T 3a1c_A 144 TAVIVAR-----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 200 (287)
T ss_dssp EEEEEEE-----------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred eEEEEEE-----------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 8887764 34678888889999999999999999999999999999999999999999
Q ss_pred CCCC------CC-c-------ccc------CC------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhH
Q psy886 764 GVFT------EE-E-------DTT------GK------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGR 817 (962)
Q Consensus 764 GI~~------~~-~-------~~~------g~------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR 817 (962)
|+.. +. . ... |. ..+.|+++|++|.+++..++.||.++.++++..+...++++|
T Consensus 201 gl~~~f~~i~~~~K~~~~~~l~~~~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~ 280 (287)
T 3a1c_A 201 NLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSR 280 (287)
T ss_dssp TCSEEECSCCTTCHHHHHHHHTTTCCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEEESSSCTHHHHHHHHTTC
T ss_pred CCceeeeecChHHHHHHHHHHhcCCeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEEEeCCCHHHHHHHHHHHH
Confidence 9842 10 0 001 11 125899999999777777889999999999999999999999
Q ss_pred HHHHHHH
Q psy886 818 AIYNNMK 824 (962)
Q Consensus 818 ~i~~ni~ 824 (962)
++++|||
T Consensus 281 ~~~~~i~ 287 (287)
T 3a1c_A 281 KTMSKIK 287 (287)
T ss_dssp -------
T ss_pred HHHHhhC
Confidence 9999986
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-17 Score=176.83 Aligned_cols=119 Identities=28% Similarity=0.467 Sum_probs=94.6
Q ss_pred CeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-------C-----------------
Q psy886 714 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-------E----------------- 769 (962)
Q Consensus 714 ~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-------~----------------- 769 (962)
+..++|.+.+.|+++|+++++++.|++.|+++.++||++...+..+++++|+..- +
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~~~~~~~~v 211 (280)
T 3skx_A 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHEKAEKVKEVQQKYVTAMV 211 (280)
T ss_dssp TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGGHHHHHHHHHTTSCEEEE
T ss_pred CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHHHHHHHHHHHhcCCEEEE
Confidence 4568899999999999999999999999999999999999999999999998421 0
Q ss_pred --ccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy886 770 --EDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLIS 832 (962)
Q Consensus 770 --~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~ 832 (962)
...+-..++.|++||+||.+++.++++||.++..+++..+..+++++|++++++++++.|.++
T Consensus 212 GD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 212 GDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp ECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred eCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 001111235899999999999999999999999999999999999999999999999998764
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-15 Score=180.04 Aligned_cols=196 Identities=19% Similarity=0.202 Sum_probs=124.8
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRI 298 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~V 298 (962)
....+|++ .+.++|+++++++|.++.|++++|+|||+ +++|++++|+|||+|.+++||+|||||+|++ +++.|
T Consensus 182 ~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~--~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---G~~~V 256 (723)
T 3j09_A 182 AFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---GESYV 256 (723)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTE--EEEEEGGGCCTTCEEEECTTCBCCSEEEEEE---CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeEEEEEE---CCeEE
Confidence 34567887 66788889999999999999999999997 7999999999999999999999999999996 45689
Q ss_pred EecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHH---HHhhccccccCCCchHHH
Q psy886 299 DQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGK---IRTEMSETEEIKTPLQQK 375 (962)
Q Consensus 299 deS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gk---i~~~~~~~~~~~tplq~~ 375 (962)
|||+|||||.|+ .--.|..+..|+...-=...+.-|..|. +.+..+..+... .-...
T Consensus 257 deS~LTGES~pv-------------------~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~-~~k~~ 316 (723)
T 3j09_A 257 DESMISGEPVPV-------------------LKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM-GSKPP 316 (723)
T ss_dssp ECHHHHCCSSCE-------------------EECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSC-CSCCH
T ss_pred ecccccCCCcce-------------------eecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhh-ccCCh
Confidence 999999999986 2467888888874321011111122221 111112112212 22335
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q psy886 376 LDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMA 450 (962)
Q Consensus 376 l~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~ 450 (962)
+.++...+....+.+.+++.++.+..+ .+..+ ..+..++..+++....+.|.++.++.-.+.....
T Consensus 317 ~~~~~d~~~~~~~~~vl~~a~~~~~~~-------~~~~~--~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~ 382 (723)
T 3j09_A 317 IQRLADKVVAYFIPTVLLVAISAFIYW-------YFIAH--APLLFAFTTLIAVLVVACPCAFGLATPTALTVGM 382 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTS-------CSSTT--CTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhcC--CcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 566666666554444433333322110 01000 0133445556666666667677766666654433
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-15 Score=180.50 Aligned_cols=98 Identities=30% Similarity=0.402 Sum_probs=86.4
Q ss_pred cccccch--hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEE
Q psy886 222 EHKCGRM--VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRID 299 (962)
Q Consensus 222 ~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~Vd 299 (962)
...+|++ .+.++|+++++++|.++.|++++|+|||+ +++|++++|+|||+|.+++||+|||||++++ +++.||
T Consensus 105 ~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~--~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---G~~~Vd 179 (645)
T 3j08_A 105 FLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGK--EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---GESYVD 179 (645)
T ss_dssp HHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTE--EEEEEGGGCCTTCEEEECTTCBCCSEEEEEE---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeEEEEEE---CcEEEE
Confidence 4567887 66788889999999999999999999997 7999999999999999999999999999996 456899
Q ss_pred ecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceEE
Q psy886 300 QSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKAR 343 (962)
Q Consensus 300 eS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~ 343 (962)
||+|||||.|+ .--.|..+..|+..
T Consensus 180 eS~LTGES~Pv-------------------~K~~g~~v~~Gt~~ 204 (645)
T 3j08_A 180 ESMISGEPVPV-------------------LKSKGDEVFGATIN 204 (645)
T ss_dssp CHHHHCCSSCE-------------------EECTTCEECTTCEE
T ss_pred cccccCCCCce-------------------ecCCCCEeeccEEE
Confidence 99999999986 24678888888743
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.1e-14 Score=170.32 Aligned_cols=98 Identities=27% Similarity=0.400 Sum_probs=88.8
Q ss_pred ccccccch--hHHHHhHHHHHHHHHhcCCccceeee-CCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEE
Q psy886 221 NEHKCGRM--VQLERNAESAIEALKEYEPEMGKVIR-GDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIR 297 (962)
Q Consensus 221 ~~~~~gr~--~~~e~ra~~~l~~L~~~~~~~a~ViR-~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~ 297 (962)
....+|++ .+.++|+.+++++|.++.|++++|+| ||+ +++|++++|+|||+|+|++||+|||||+|++ +.+.
T Consensus 196 ~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~--~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~---G~~~ 270 (736)
T 3rfu_A 196 TLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGS--EEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE---GRSF 270 (736)
T ss_dssp HHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEE--EEEEETTTCCTTCEECCCSSEECCSCEEECS---SCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCE--EEEEEHhhCCCCCEEEECCCCcccccEEEEE---CceE
Confidence 56778888 77889999999999999999999998 776 7999999999999999999999999999995 4568
Q ss_pred EEecCCCCCCcceeccCCCCCCCccCCCCCcceEecCceeeeceE
Q psy886 298 IDQSILTGESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKA 342 (962)
Q Consensus 298 VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~ 342 (962)
||||+|||||.|+.| -.|..+..|+.
T Consensus 271 VDES~LTGES~Pv~K-------------------~~gd~v~~Gt~ 296 (736)
T 3rfu_A 271 VDESMVTGEPIPVAK-------------------EASAKVIGATI 296 (736)
T ss_dssp EECSSSTTCSSCEEE-------------------CTTCEECTTCE
T ss_pred eeecccCCccccEEe-------------------ccCCcCCCceE
Confidence 999999999999988 67999888874
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-12 Score=143.27 Aligned_cols=93 Identities=13% Similarity=0.159 Sum_probs=78.7
Q ss_pred ccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCc--------------------------------
Q psy886 723 MLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEE-------------------------------- 770 (962)
Q Consensus 723 i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~-------------------------------- 770 (962)
..+++||+++++++.|+++|++|+|+|||+..++.+||+++|+...+.
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 357999999999999999999999999999999999999999853210
Q ss_pred ----------------------cccCCC---CCcCcEEEecc-------ChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 771 ----------------------DTTGKS---YSKAEIGIAMG-------SGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 771 ----------------------~~~g~~---l~~AdVGIAmg-------~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
.++.+. +.+|||||||| +|+|+++|+|||||+||+|.+++.+|-+
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 001111 24899999999 7999999999999999999999998864
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=99.10 E-value=2.5e-11 Score=153.40 Aligned_cols=48 Identities=79% Similarity=1.164 Sum_probs=45.6
Q ss_pred CCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCC
Q psy886 157 GDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVP 204 (962)
Q Consensus 157 GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~ 204 (962)
||+|.|++||+|||||+|++|++++++||||+|||||.|+.|.+++.+
T Consensus 149 GDiV~l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~ 196 (995)
T 3ar4_A 149 GDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVP 196 (995)
T ss_dssp TCEEEEETTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCC
T ss_pred CCEEEECCCCcccccEEEEEEeeceEEEEcccccCCCcceeccccccC
Confidence 999999999999999999999899999999999999999999998654
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.69 E-value=7.3e-08 Score=122.01 Aligned_cols=200 Identities=22% Similarity=0.225 Sum_probs=128.4
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
.+.|+|+++++++|+++.|++|+|+|||+ +++|++++|||||||.|++||+|||||+|++ +.++.||||+|||||.
T Consensus 158 ~~qe~ka~~al~~L~~l~~~~a~ViRdG~--~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~--~~~l~VdES~LTGES~ 233 (1034)
T 3ixz_A 158 YYQEFKSTNIIASFKNLVPQQATVIRDGD--KFQINADQLVVGDLVEMKGGDRVPADIRILQ--AQGRKVDNSSLTGESE 233 (1034)
T ss_pred HHHHHHHHHHHHHHhccCCCeeEEEECCE--EEEEEHHHCCCCcEEEEcCCceecCCeEEEE--eCCceEEecccCCCCC
Confidence 67899999999999999999999999998 7999999999999999999999999999997 4578999999999999
Q ss_pred ceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHHH---hhccccccCCCchHHHHHHHHHHHHH
Q psy886 309 SVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIR---TEMSETEEIKTPLQQKLDEFGEQLSK 385 (962)
Q Consensus 309 pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~---~~~~~~~~~~tplq~~l~~~~~~l~~ 385 (962)
|+.|. +. ....+.+-.+..+..|+...-=...|.-+..|.-. +..... ....+-...+.+....+..
T Consensus 234 pv~K~------~~---~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~-~~~~~~~tpl~~~~~~~~~ 303 (1034)
T 3ixz_A 234 PQTRS------PE---CTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLA-SGVENEKTPIAIEIEHFVD 303 (1034)
T ss_pred Ceecc------CC---CccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhh-cccccCCCcHHHHHHHHHH
Confidence 99994 11 11223333444455565333222233334334321 111111 1112223345555555555
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhh
Q psy886 386 VISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKK 452 (962)
Q Consensus 386 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~v~i~l~~~~~~m~k~ 452 (962)
.+..+++++.++.+.. +. .....+..++..+++.+-.+.|.+++++...+...-.++
T Consensus 304 ~l~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~r 360 (1034)
T 3ixz_A 304 IIAGLAILFGATFFIV---------AM-CIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKR 360 (1034)
T ss_pred HHHHHHHHHHHHHHHH---------HH-HhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHH
Confidence 5544444443332110 00 001234455556666666777888888877776554443
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.57 E-value=3.6e-08 Score=121.62 Aligned_cols=60 Identities=35% Similarity=0.524 Sum_probs=57.0
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEe
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIK 290 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~ 290 (962)
...|+|+++++++|+++.|++++|+|||+ +++|++++|||||+|.|++||+|||||+|++
T Consensus 159 ~~qe~~a~~a~~~L~~l~~~~a~V~RdG~--~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~ 218 (920)
T 1mhs_A 159 FVQEFQAGSIVDELKKTLALKAVVLRDGT--LKEIEAPEVVPGDILQVEEGTIIPADGRIVT 218 (920)
T ss_dssp HHHHHHHHHHHHTTTTCCCSSCEEECSSS--EEECCTTTSCTTSEEEECTTCBCSSEEEEEE
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEEECCE--EEEEEHHHcCCCCEEEeCCCCccccceEEEe
Confidence 45899999999999999999999999997 7999999999999999999999999999983
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.1e-08 Score=101.29 Aligned_cols=101 Identities=10% Similarity=0.139 Sum_probs=83.9
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-----Cc------------------------cccCCCCCcCcEEE
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-----EE------------------------DTTGKSYSKAEIGI 784 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-----~~------------------------~~~g~~l~~AdVGI 784 (962)
+++.|+++|+++.++||+....+..+++++||..- ++ ..+-..+++|++|+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~ 133 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGREDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGM 133 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCcCChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeE
Confidence 99999999999999999999999999999998421 00 00111225899999
Q ss_pred eccChhHHHHhhcccccccCC----hhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 785 AMGSGTAVAKSASEMVLADDN----FSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 785 Amg~gtdvAkeaADivL~dd~----f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
+|+.+++.+++.||.|+.+++ +..+.+.+...|..+++|++++.|.+.+|
T Consensus 134 ~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 134 AVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp ECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTTC---
T ss_pred EeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcccccc
Confidence 999999999999999998763 78899999999999999999999999988
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.5e-07 Score=119.07 Aligned_cols=155 Identities=23% Similarity=0.249 Sum_probs=107.7
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCc
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESV 308 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~ 308 (962)
...|+|+++++++|+++.|++|+|+|||+ +++|++++|||||||.|++||+|||||+|+++ .+|.||||+|||||.
T Consensus 153 ~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~--~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g--~~~~VdeS~LTGES~ 228 (1028)
T 2zxe_A 153 YYQEAKSSRIMDSFKNMVPQQALVIRDGE--KSTINAEFVVAGDLVEVKGGDRIPADLRIISA--HGCKVDNSSLTGESE 228 (1028)
T ss_dssp HHHTCCCCCHHHHHHTTSCSEEEEEETTE--EEEEEGGGCCTTCEEEEETTCBCCSEEEEEEE--EEEEEECHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHhhCCCeeEEEECCE--EEEEEHHHCCcCCEEEECCCCEeeceEEEEee--CcEEEEcCccCCCCc
Confidence 56789999999999999999999999997 79999999999999999999999999999974 378999999999999
Q ss_pred ceeccCCCCCCCccCCCCCcceEecCceeeeceEEEEEEEeccchhhHHH---HhhccccccCCCchHHHHHHHHHHHHH
Q psy886 309 SVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKI---RTEMSETEEIKTPLQQKLDEFGEQLSK 385 (962)
Q Consensus 309 pv~K~~~~~~~~~~~~~~~~n~v~aGT~v~~G~~~~vV~~tG~~T~~gki---~~~~~~~~~~~tplq~~l~~~~~~l~~ 385 (962)
|+.|.++ ....|.+-+...+..|+...-=...|.-+..|.= .+..+.... ..+-...+++....+..
T Consensus 229 pv~K~~~---------~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~-~~~~~t~lq~~~~~~~~ 298 (1028)
T 2zxe_A 229 PQTRSPE---------FSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASG-LEVGRTPIAIEIEHFIH 298 (1028)
T ss_dssp CEECCSS---------CCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHH-SCCCCCHHHHHHHHHHH
T ss_pred ceecccC---------CCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccC-CCCCCCcHHHHHHHHHH
Confidence 9999864 1122333333456778744332333333433421 111111111 12223456666666666
Q ss_pred HHHHHHHHHHHH
Q psy886 386 VISIICVAVWAI 397 (962)
Q Consensus 386 ~~~~~~~~~~~i 397 (962)
++..+++++.++
T Consensus 299 ~l~~~~l~~~~~ 310 (1028)
T 2zxe_A 299 IITGVAVFLGVS 310 (1028)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555544443
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.33 E-value=7.1e-08 Score=119.06 Aligned_cols=59 Identities=42% Similarity=0.529 Sum_probs=56.6
Q ss_pred hHHHHhHHHHHHHHHhcCCccceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEE
Q psy886 229 VQLERNAESAIEALKEYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 289 (962)
Q Consensus 229 ~~~e~ra~~~l~~L~~~~~~~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll 289 (962)
.+.|+|+++++++|+++.|++++|+|||+ +++|++++|||||+|.|++||+|||||+|+
T Consensus 111 ~~qe~ka~~al~~L~~~~~~~a~V~RdG~--~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll 169 (885)
T 3b8c_A 111 FIEENNAGNAAAALMAGLAPKTKVLRDGK--WSEQEAAILVPGDIVSIKLGDIIPADARLL 169 (885)
T ss_dssp TTTTTTTTTHHHHTTTSCSCCCCCCCSSC--SCCCCTTTTCTTSBCCCCSSCCCSSCCCCC
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEECCE--EEEEEHHHCCCCCEEEECCCCEEeeceEEE
Confidence 56899999999999999999999999997 789999999999999999999999999997
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.3e-07 Score=99.80 Aligned_cols=108 Identities=12% Similarity=0.139 Sum_probs=86.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------CccccC-----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDTTG----------------------- 774 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~~g----------------------- 774 (962)
+++|++.++++.|+++|+++.|+||++...+..+++++|+..- +...+|
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~~l 257 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQY 257 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHHHc
Confidence 7999999999999999999999999999999999999998420 000000
Q ss_pred -----------------CCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 775 -----------------KSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 775 -----------------~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
..++.|++|++| ++.+..|++||.++..+++..++.+++......++|++|+.|.+.||
T Consensus 258 gi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 258 DVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--------
T ss_pred CCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccccccccc
Confidence 011489999999 89999999999999999999999999999888899999999999887
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=3.2e-06 Score=84.43 Aligned_cols=107 Identities=13% Similarity=0.104 Sum_probs=84.6
Q ss_pred CccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---Cc--------------------------cccCCCCC
Q psy886 728 RKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE---EE--------------------------DTTGKSYS 778 (962)
Q Consensus 728 R~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~---~~--------------------------~~~g~~l~ 778 (962)
.++..++|+.|+++|++++++||++...+..+++++|+... .. ..+-..++
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~ 116 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFA 116 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 45667999999999999999999999999999999998421 00 00011125
Q ss_pred cCcEEEeccChhHHHHhhcccccccCChh----HHHHHHHHhHHHHHHHHHHHHHHHHhh
Q psy886 779 KAEIGIAMGSGTAVAKSASEMVLADDNFS----SIVAAVEEGRAIYNNMKQFIRYLISSN 834 (962)
Q Consensus 779 ~AdVGIAmg~gtdvAkeaADivL~dd~f~----~iv~ai~~gR~i~~ni~k~i~~~l~~n 834 (962)
.|+++++|+++.+..++.||.|+.+++-. .+.+.+...|..+++++.++.|..+-|
T Consensus 117 ~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 117 ACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLKSVK 176 (180)
T ss_dssp HSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHHHGG
T ss_pred HcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhhhhc
Confidence 89999999988999999999999876543 445666668888999999999988765
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=97.74 E-value=6.5e-06 Score=83.20 Aligned_cols=90 Identities=13% Similarity=0.203 Sum_probs=68.8
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-----------------------------CccccCCCCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-----------------------------EEDTTGKSYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-----------------------------~~~~~g~~l~~AdVG 783 (962)
.+|+.|+++|+++.++||+....+..+++++||..- |...+-..+++|+++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~ 138 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALR 138 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSCSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEE
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCE
Confidence 469999999999999999999999999999998520 000111123699999
Q ss_pred EeccChhHHHHhhcccccccCC----hhHHHHHHHHhHHHHHH
Q psy886 784 IAMGSGTAVAKSASEMVLADDN----FSSIVAAVEEGRAIYNN 822 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~dd~----f~~iv~ai~~gR~i~~n 822 (962)
++|+++.+.+++.||.|+.+++ +..+.+.+...|..+++
T Consensus 139 va~~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~~ 181 (195)
T 3n07_A 139 VCVADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELDV 181 (195)
T ss_dssp EECTTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSCC
T ss_pred EEECChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHHH
Confidence 9999999999999999998765 45566666555554443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=1.3e-05 Score=80.74 Aligned_cols=97 Identities=11% Similarity=0.084 Sum_probs=78.6
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC------Cc-----------------------cccCCCCCcCcEEE
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE------EE-----------------------DTTGKSYSKAEIGI 784 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~------~~-----------------------~~~g~~l~~AdVGI 784 (962)
+++.|+++|+++.++||+....+..+++++|+..- .. ..+-..++.|++++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~ 133 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGV 133 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEE
Confidence 59999999999999999999999999999998521 00 00011125899999
Q ss_pred eccChhHHHHhhcccccccCC----hhHHHHHHHHhHHHHHHHHHHHHHH
Q psy886 785 AMGSGTAVAKSASEMVLADDN----FSSIVAAVEEGRAIYNNMKQFIRYL 830 (962)
Q Consensus 785 Amg~gtdvAkeaADivL~dd~----f~~iv~ai~~gR~i~~ni~k~i~~~ 830 (962)
+|+++.+..++.||.|+.+++ +..+.+.+...|..|+++.+.+.++
T Consensus 134 ~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 134 AVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp ECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred EeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 999999999999999998876 6777888888999999888877654
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=4e-05 Score=74.84 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=69.7
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-----------------------------CccccCCCCCcCcEEE
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-----------------------------EEDTTGKSYSKAEIGI 784 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-----------------------------~~~~~g~~l~~AdVGI 784 (962)
+++.|+++|+++.++||+....+..+++++|+... |...+-...+.|++++
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~ 118 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAG 118 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEE
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecccCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 89999999999999999999999999999998521 0001111236999999
Q ss_pred eccChhHHHHhhcccccccCC----hhHHHHHHHHhHHHHHHHHHH
Q psy886 785 AMGSGTAVAKSASEMVLADDN----FSSIVAAVEEGRAIYNNMKQF 826 (962)
Q Consensus 785 Amg~gtdvAkeaADivL~dd~----f~~iv~ai~~gR~i~~ni~k~ 826 (962)
+++++++..++.||.++.+++ +..+++.+. +..++.+.++
T Consensus 119 ~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll--~~~~~~~~~~ 162 (164)
T 3e8m_A 119 VPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVL--GINLEDFIAV 162 (164)
T ss_dssp CCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT--TCCHHHHHHH
T ss_pred EcCChHHHHHHhCcEEeccCCCCcHHHHHHHHHH--ccCchhhHHh
Confidence 999999999999999999988 555665555 3334444443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.50 E-value=4.8e-05 Score=75.44 Aligned_cols=91 Identities=13% Similarity=0.153 Sum_probs=65.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC--CCCc--------------------------cccCCCCCcCcEEEe
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVF--TEEE--------------------------DTTGKSYSKAEIGIA 785 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~--~~~~--------------------------~~~g~~l~~AdVGIA 785 (962)
+++.|+++|+++.++||+....+..+++++||. .... ..+-..++.|+++++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~ 126 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIPVLHGIDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVA 126 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCCEEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCeeEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEE
Confidence 899999999999999999999999999999983 1100 001111258999999
Q ss_pred ccChhHHHHhhcccccccCChhH----HHHHHHHhHHHHHHHH
Q psy886 786 MGSGTAVAKSASEMVLADDNFSS----IVAAVEEGRAIYNNMK 824 (962)
Q Consensus 786 mg~gtdvAkeaADivL~dd~f~~----iv~ai~~gR~i~~ni~ 824 (962)
|+.+++..++.||.++.+++... +.+.+...|..+.+..
T Consensus 127 ~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~~~~~~~~~ 169 (176)
T 3mmz_A 127 VASAHDVVRGAARAVTTVPGGDGAIREIASWILGPSLDSLDKE 169 (176)
T ss_dssp CTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTTTC-----
T ss_pred CCChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcccccc
Confidence 99999999999999998887444 4444444444444433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00015 Score=74.17 Aligned_cols=84 Identities=12% Similarity=0.144 Sum_probs=65.4
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-----C------------------------ccccCCCCCcCcEEE
Q psy886 734 SIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-----E------------------------EDTTGKSYSKAEIGI 784 (962)
Q Consensus 734 aI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-----~------------------------~~~~g~~l~~AdVGI 784 (962)
+++.|+++|+++.++||+....+..+++++||..- + ...+-..+++|++++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~ 163 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQSDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSV 163 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSCSSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEE
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcccCChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEE
Confidence 99999999999999999999999999999998420 0 001111236999999
Q ss_pred eccChhHHHHhhcccccccCC----hhHHHHHHHHhH
Q psy886 785 AMGSGTAVAKSASEMVLADDN----FSSIVAAVEEGR 817 (962)
Q Consensus 785 Amg~gtdvAkeaADivL~dd~----f~~iv~ai~~gR 817 (962)
+|+.+++.++++||+|+.+++ +..+++.+...+
T Consensus 164 a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~ 200 (211)
T 3ij5_A 164 AVADAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQ 200 (211)
T ss_dssp ECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred EeCCccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHc
Confidence 999999999999999998763 455555554443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0017 Score=62.36 Aligned_cols=106 Identities=12% Similarity=0.167 Sum_probs=65.9
Q ss_pred cChhHHHHHHHHHHc-CCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEe
Q psy886 561 GEATETALIVLAEKL-NPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVK 639 (962)
Q Consensus 561 g~p~e~Al~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~K 639 (962)
.+|...|++.+|++. ++.... .... .....+|++..++..+.+ + + .-+.|
T Consensus 50 eHPla~AIv~~A~~~~~l~~~~----------------~~~~--~~~~~~F~a~~G~~Gv~v---~-------G-~~v~v 100 (156)
T 1svj_A 50 ETPEGRSIVILAKQRFNLRERD----------------VQSL--HATFVPFTAQSRMSGINI---D-------N-RMIRK 100 (156)
T ss_dssp CSHHHHHHHHHHHHHTTCCCCC----------------HHHH--TCEEEEEETTTTEEEEEE---T-------T-EEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCccc----------------cccc--ccceeeccccCCCCeEEE---C-------C-EEEEE
Confidence 579999999999875 542110 0000 012357887777556533 1 2 45789
Q ss_pred CChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEE
Q psy886 640 GAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVG 719 (962)
Q Consensus 640 GA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG 719 (962)
|+++.|.+.+..... .+.++ +.+..++++ .+|.+++.+|. |..++|
T Consensus 101 Gn~~~i~~l~~~~gi-----~~~~~----~~~~~~~la--~~G~T~v~VA~-----------------------d~~l~G 146 (156)
T 1svj_A 101 GSVDAIRRHVEANGG-----HFPTD----VDQKVDQVA--RQGATPLVVVE-----------------------GSRVLG 146 (156)
T ss_dssp EEHHHHHHHHHHHTC-----CCCHH----HHHHHHHHH--HTTCEEEEEEE-----------------------TTEEEE
T ss_pred eCcHHHHHHHHHcCC-----CCcHH----HHHHHHHHH--hCCCCEEEEEE-----------------------CCEEEE
Confidence 999877666542211 12222 334445554 78989998882 457999
Q ss_pred EecccCCCCc
Q psy886 720 VVGMLDPPRK 729 (962)
Q Consensus 720 l~~i~D~lR~ 729 (962)
++++.|++||
T Consensus 147 vIalaD~iK~ 156 (156)
T 1svj_A 147 VIALKDIVKG 156 (156)
T ss_dssp EEEEEECCCC
T ss_pred EEEEecCCCC
Confidence 9999999996
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00018 Score=70.61 Aligned_cols=94 Identities=10% Similarity=0.077 Sum_probs=67.7
Q ss_pred CeEEEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH--HcCCC--CCCc-------------------
Q psy886 714 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICR--RIGVF--TEEE------------------- 770 (962)
Q Consensus 714 ~l~~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~--~~GI~--~~~~------------------- 770 (962)
+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ ++|+. .+..
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~~~~g~~~K~~~l~~~~~~~gi~~~~ 101 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCKTEVSVSDKLATVDEWRKEMGLCWKE 101 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCCEECSCSCHHHHHHHHHHHTTCCGGG
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcEEEECCCChHHHHHHHHHHcCcChHH
Confidence 3456777777777 3899999999999999999 77888899 67763 1000
Q ss_pred -------cccCCCCCcCcEEEeccChhHHHHhhcccccccCC----hhHHHHHHHH
Q psy886 771 -------DTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDN----FSSIVAAVEE 815 (962)
Q Consensus 771 -------~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~----f~~iv~ai~~ 815 (962)
..+-+.++.|++++||+++++.+|+.||.|+.+++ +..+.+.|..
T Consensus 102 ~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il~ 157 (168)
T 3ewi_A 102 VAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIREFAEHIFL 157 (168)
T ss_dssp EEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHHH
T ss_pred EEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHHHHHHHHHH
Confidence 00011125899999999999999999999997654 3444444443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0019 Score=66.76 Aligned_cols=42 Identities=17% Similarity=0.244 Sum_probs=39.0
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
..+.+++.++|++|+++|++++++||+....+..+++++|+.
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN 62 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence 457889999999999999999999999999999999999873
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0013 Score=74.78 Aligned_cols=98 Identities=13% Similarity=0.190 Sum_probs=81.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------CccccCC----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDTTGK---------------------- 775 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~~g~---------------------- 775 (962)
+++|++.+.++.||+.|+++.++||.....+..+++++|+..- +...+|.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~~~ 335 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQRA 335 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHHHc
Confidence 7999999999999999999999999999999999999998421 1111110
Q ss_pred ------------------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhHHHHHHHH
Q psy886 776 ------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMK 824 (962)
Q Consensus 776 ------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~ 824 (962)
.+++|++|+++ .+.+..++.||.++..+++..++.++.++|.-+.+.-
T Consensus 336 gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~~~ 401 (415)
T 3p96_A 336 GVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAAD 401 (415)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHHHH
T ss_pred CcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHHhh
Confidence 01489999999 6778889999999999999999999999888776653
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0011 Score=67.31 Aligned_cols=92 Identities=12% Similarity=0.198 Sum_probs=71.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Cccc---------cCC------------
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDT---------TGK------------ 775 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~---------~g~------------ 775 (962)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+..- +... .++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~~~ 153 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEMLLVLQRL 153 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHHHHHHHHHH
Confidence 46899999999999999999999999999999999999998420 0000 010
Q ss_pred -------------------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHhH
Q psy886 776 -------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGR 817 (962)
Q Consensus 776 -------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR 817 (962)
.++.|+++++| ++.+..|+.||.|+.++||..+..+++|-.
T Consensus 154 ~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 154 LNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp HTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred cCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 01589999999 778888999999999999999998887643
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.00079 Score=73.97 Aligned_cols=112 Identities=18% Similarity=0.202 Sum_probs=85.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------C-----------------cc---------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------E-----------------ED--------- 771 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~-----------------~~--------- 771 (962)
++++++.+.++.|++ |+++.++|||+...+..+.+.+|+... + ..
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l 181 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF 181 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhccccccceeEEecCHHHHhhhhHHHH
Confidence 468999999999999 999999999997777777777766210 0 00
Q ss_pred -------------------c--------------cCCC-----------------CCcC----cEEEeccChhHHHHhhc
Q psy886 772 -------------------T--------------TGKS-----------------YSKA----EIGIAMGSGTAVAKSAS 797 (962)
Q Consensus 772 -------------------~--------------~g~~-----------------l~~A----dVGIAmg~gtdvAkeaA 797 (962)
. ...+ ++.| ++|||| ++.+.+|++|
T Consensus 182 ~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~~A 260 (332)
T 1y8a_A 182 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALKHA 260 (332)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHTTC
T ss_pred HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHhhC
Confidence 0 0001 1478 999999 9999999999
Q ss_pred ccccccCChhHHHHH----HHHhHHHHHHHHH-------HHHHHHHhhHHHHHH
Q psy886 798 EMVLADDNFSSIVAA----VEEGRAIYNNMKQ-------FIRYLISSNIGEVVS 840 (962)
Q Consensus 798 DivL~dd~f~~iv~a----i~~gR~i~~ni~k-------~i~~~l~~ni~~~~~ 840 (962)
|.|+.+++...+..+ +.+||+.+ |+-| +|.+..+.|+.+++.
T Consensus 261 d~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (332)
T 1y8a_A 261 DVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGEVLE 313 (332)
T ss_dssp SEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHHHHH
T ss_pred cEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHHHHH
Confidence 999988888655554 55799888 7777 788888889888764
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0033 Score=62.67 Aligned_cols=82 Identities=17% Similarity=0.262 Sum_probs=62.3
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC---CCcc--------------------ccCC------CCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT---EEED--------------------TTGK------SYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~---~~~~--------------------~~g~------~l~~AdVG 783 (962)
.+++.|+++|++++++||+....+..+++++|+.. .... .-|. .++.|+++
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~ 139 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLS 139 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEE
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCE
Confidence 48999999999999999999999999999999842 0000 0011 12589999
Q ss_pred EeccChhHHHHhhcccccccCChhHHH-HHHH
Q psy886 784 IAMGSGTAVAKSASEMVLADDNFSSIV-AAVE 814 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~dd~f~~iv-~ai~ 814 (962)
++++++.+..++.||.++.+.+-..++ ++++
T Consensus 140 ~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 140 VAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp EECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred EEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 999988888889999999876555554 4443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0014 Score=71.46 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=71.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Ccccc----C-----C-------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EEDTT----G-----K------------- 775 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~~~----g-----~------------- 775 (962)
+++|++.+.++.|+++|+++.++||.....+..+.+++|+..- ++..+ + +
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~~l 258 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARL 258 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHHHc
Confidence 4899999999999999999999999999999999999998420 00000 0 0
Q ss_pred ------------------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 776 ------------------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 776 ------------------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
..+.|++|+++ .+.+..++.||.++..+++..+..++++
T Consensus 259 gv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 259 NIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTCS
T ss_pred CCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHHh
Confidence 01489999999 5777888899999999999998877653
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.78 E-value=0.0078 Score=58.12 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=64.9
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC------CCcc----------cc-------CC------CC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT------EEED----------TT-------GK------SY 777 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~------~~~~----------~~-------g~------~l 777 (962)
+.+++.++++.|++.|++++++||.....+..+.+++|+.. ++.. .. |. ..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a 116 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVM 116 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 35778999999999999999999999999999999999842 0000 00 11 12
Q ss_pred CcCcEEEeccChhHHHHhhcccccccCChhHHH
Q psy886 778 SKAEIGIAMGSGTAVAKSASEMVLADDNFSSIV 810 (962)
Q Consensus 778 ~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv 810 (962)
+.|+++++++++.+..++.||.++.+.+-..++
T Consensus 117 ~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 117 KKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 489999999888888889999999876655555
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=95.40 E-value=0.024 Score=58.03 Aligned_cols=90 Identities=28% Similarity=0.407 Sum_probs=67.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-------CccccCCC----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-------EEDTTGKS---------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-------~~~~~g~~---------------------- 776 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... +....++.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~v 183 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVI 183 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEE
Confidence 4689999999999999999999999999999999999997431 11101110
Q ss_pred ---------CCcCcE---EEeccC-hhHHHH-hhcccccccCChhHHHHHHHHhH
Q psy886 777 ---------YSKAEI---GIAMGS-GTAVAK-SASEMVLADDNFSSIVAAVEEGR 817 (962)
Q Consensus 777 ---------l~~AdV---GIAmg~-gtdvAk-eaADivL~dd~f~~iv~ai~~gR 817 (962)
.++|++ +|+||. ..+..+ ..||.++ +++..+.+.++.|+
T Consensus 184 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 184 GDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp ESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 036777 999994 334444 4799987 67999999888765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=95.19 E-value=0.02 Score=57.37 Aligned_cols=91 Identities=10% Similarity=0.091 Sum_probs=70.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---Ccc-----ccCCC---------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE---EED-----TTGKS--------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~---~~~-----~~g~~--------------------- 776 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... +.. ..++.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~ 149 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVM 149 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 3578999999999999999999999999999999999998321 111 11110
Q ss_pred ----------CCcCcE-EEeccChhHHHHhhcccccccCChhHHHHHHHHhHH
Q psy886 777 ----------YSKAEI-GIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEGRA 818 (962)
Q Consensus 777 ----------l~~AdV-GIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~gR~ 818 (962)
.+.|++ +|+|++|.+..++.||.++ +++..+...++..|+
T Consensus 150 iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 150 VGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAEGH 200 (205)
T ss_dssp EESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHTTC
T ss_pred ECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhccc
Confidence 037888 9999977777788899988 678889888876553
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=93.77 E-value=0.022 Score=56.96 Aligned_cols=85 Identities=16% Similarity=0.325 Sum_probs=63.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Ccc---------ccCC----C--------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EED---------TTGK----S-------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~~---------~~g~----~-------- 776 (962)
++.+++.++++.|++.|+++.++||.....+..+.+.+|+... +.. ..+. .
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~l 155 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIE 155 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHc
Confidence 4678999999999999999999999999888888888887310 000 0000 0
Q ss_pred -------------------CCcCcEEEeccChhHHHHhhcccccccCChhHHHH
Q psy886 777 -------------------YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVA 811 (962)
Q Consensus 777 -------------------l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ 811 (962)
++.|+++++|+ +.+..++.||.++.++++..+..
T Consensus 156 gi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 156 GINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 13899999998 55666888999987767876654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=93.45 E-value=0.016 Score=57.46 Aligned_cols=82 Identities=18% Similarity=0.418 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-------Ccc-----------------cc-------C
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-------EED-----------------TT-------G 774 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-------~~~-----------------~~-------g 774 (962)
+++|++.+.++.|++.|+++.++|++....+..+ +.+|+..- +.. .. |
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l~~~~~i~iG 157 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRFRDGFILAMG 157 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGGTTSCEEEEE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhcCcCcEEEEe
Confidence 7899999999999999999999999999998888 88887421 000 00 0
Q ss_pred C------CCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 775 K------SYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 775 ~------~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
. .++.|++||+|+++.+ .||.++ +++..+.+.++
T Consensus 158 D~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 158 DGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp CTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred CCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 0 1148999999997665 789887 45666666554
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.79 E-value=0.11 Score=55.03 Aligned_cols=64 Identities=16% Similarity=0.247 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
+......+++++||..+ |..++-..++.|++|+|||++.+..|++||.|..+++=..+.++|+.
T Consensus 203 K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 203 KEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 33444566777776443 22233334579999999999999999999999977776778777763
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.48 E-value=0.12 Score=52.10 Aligned_cols=88 Identities=10% Similarity=0.180 Sum_probs=65.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-Ccc------ccCCC----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EED------TTGKS---------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~------~~g~~---------------------- 776 (962)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... +.. ..++.
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~i 165 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMI 165 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEE
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEE
Confidence 5789999999999999999999999999999999999998531 100 00110
Q ss_pred ---------CCcCcE---EEeccCh--hHHHHhhcccccccCChhHHHHHHHH
Q psy886 777 ---------YSKAEI---GIAMGSG--TAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 777 ---------l~~AdV---GIAmg~g--tdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
.+.|++ +|+||.+ .+..+..||.++ +++..+.+.+..
T Consensus 166 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 166 GDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp ESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 136777 9999943 344468899988 567777777664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=92.45 E-value=0.23 Score=49.49 Aligned_cols=40 Identities=5% Similarity=0.202 Sum_probs=38.3
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999999999984
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=90.93 E-value=0.14 Score=51.78 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=64.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-Ccccc------CCC----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDTT------GKS---------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~~------g~~---------------------- 776 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+..|+... +.... ++.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~i 170 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVI 170 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEE
Confidence 4578999999999999999999999999999999999998531 11110 110
Q ss_pred ---------CCcCcE---EEecc-ChhHHHHhh-cccccccCChhHHHHHHHHh
Q psy886 777 ---------YSKAEI---GIAMG-SGTAVAKSA-SEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 777 ---------l~~AdV---GIAmg-~gtdvAkea-ADivL~dd~f~~iv~ai~~g 816 (962)
.+.|++ +|++| ...+..+++ ||.|+ +++..+...++..
T Consensus 171 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~~ 222 (233)
T 3s6j_A 171 GDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDEI 222 (233)
T ss_dssp ESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGGT
T ss_pred eCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHHH
Confidence 025665 88888 444444444 89887 6788888877654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=90.50 E-value=0.13 Score=54.36 Aligned_cols=65 Identities=20% Similarity=0.313 Sum_probs=50.1
Q ss_pred CCHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 751 DNKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
++......+++.+|+-.+ |..++-+.++.|++|||||++.+..|++||.|..+++=..+.++|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 346666778899998643 23344445679999999999999999999999987777778877764
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=90.14 E-value=0.13 Score=57.18 Aligned_cols=41 Identities=12% Similarity=0.103 Sum_probs=39.0
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
..++|++++.|+.||++|++|+++||.....+..+|+++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35799999999999999999999999999999999999986
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=90.13 E-value=0.46 Score=49.31 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=36.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 143 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 143 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 46799999999999999999999999998888888777653
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=89.49 E-value=0.19 Score=52.62 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 751 DNKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 751 D~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
++......+++.+||-.+ |..++-.-++.|++|||||++.+..|++||.|..+++=..+.++++.
T Consensus 194 ~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 194 SKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 344555677888888643 23334444579999999999999999999999988777788887764
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=89.44 E-value=0.79 Score=44.36 Aligned_cols=39 Identities=18% Similarity=0.211 Sum_probs=34.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNK---------------ATAEAICRRIG 764 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~---------------~TA~~IA~~~G 764 (962)
++.|++.++++.|+++|+++.++|+... ..+..+.+++|
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 80 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG 80 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999885 56677777888
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=88.97 E-value=0.13 Score=55.15 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=27.4
Q ss_pred HhhhcCccCCchhhhhc---------CCeeEEEecCCCcccCCce
Q psy886 449 MAKKNAIVRSLPSVETL---------GCTSVICSDKTGTLTTNQM 484 (962)
Q Consensus 449 m~k~~ilvr~~~~~E~L---------G~v~~I~~DKTGTLT~n~m 484 (962)
+.|.++++|++..+|.+ .+.. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 47889999999999873 3344 56699999998654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=88.78 E-value=0.47 Score=47.07 Aligned_cols=87 Identities=13% Similarity=0.224 Sum_probs=62.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---------Ccccc----CC-C---------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE---------EEDTT----GK-S--------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~---------~~~~~----g~-~--------------- 776 (962)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+..- +.... .+ +
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~~ 147 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCCE
Confidence 5799999999999999 99999999999999999999998521 11000 00 0
Q ss_pred -------------CCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 777 -------------YSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 777 -------------l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
.+.|+++++++...+..+.+.+++. .+++..+...++
T Consensus 148 ~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 148 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred EEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 0378999998754455444555542 467888777664
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=88.28 E-value=0.27 Score=51.14 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=50.0
Q ss_pred cCCCHHHH-HHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 749 TGDNKATA-EAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 749 TGD~~~TA-~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
.|-+..+| ..+++.+||-.+ |..++-+-++.|++|||||++.+..|++||.|..+.+=..+.++++.
T Consensus 180 ~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 180 AGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp SSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 44455554 667888998643 33344445679999999999999999999999887777788887763
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=88.28 E-value=0.56 Score=47.28 Aligned_cols=86 Identities=13% Similarity=0.168 Sum_probs=64.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-Ccc-------------------------------cc
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EED-------------------------------TT 773 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~-------------------------------~~ 773 (962)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... +.. .-
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcCCCchhEEEE
Confidence 5679999999999999 99999999999999999999987421 000 00
Q ss_pred CCC-------CCcCc---EEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 774 GKS-------YSKAE---IGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 774 g~~-------l~~Ad---VGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
|.. .+.|+ +++++|.+.+-.++.+|.++ +++..+...++
T Consensus 179 GD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred cCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 111 13677 78888877777777899887 56888777765
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=87.97 E-value=0.23 Score=50.33 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=65.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-Cccc------cCCC----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDT------TGKS---------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~------~g~~---------------------- 776 (962)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... +... .++.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~v 178 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILFV 178 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCCCcccEEEE
Confidence 4689999999999999999999999999999999999998531 1000 0110
Q ss_pred ---------CCcCcEEEec----cChhHHHHhhcccccccCChhHHHHHHHHh
Q psy886 777 ---------YSKAEIGIAM----GSGTAVAKSASEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 777 ---------l~~AdVGIAm----g~gtdvAkeaADivL~dd~f~~iv~ai~~g 816 (962)
.+.|+++++| +...+..+..+|.++ +++..+...++..
T Consensus 179 GD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~~ 229 (233)
T 3umb_A 179 SSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQAR 229 (233)
T ss_dssp ESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC-
T ss_pred eCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHHh
Confidence 1378888888 444444466788887 6788888877653
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=87.82 E-value=0.46 Score=49.61 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHcCCCCCCc------cccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTEEE------DTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~~~------~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
+......+++.+|+..++- .++-..++.|++|||||++.+..|++||.|..+.+=..+.++++.
T Consensus 201 K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 201 KGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp HHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 5556677899999865432 333344579999999999999999999999987777778877764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=87.81 E-value=0.39 Score=48.44 Aligned_cols=41 Identities=12% Similarity=0.317 Sum_probs=39.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|+++|++++++|+.....+..+.+++|+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999999985
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=87.76 E-value=0.26 Score=52.80 Aligned_cols=85 Identities=11% Similarity=0.127 Sum_probs=59.1
Q ss_pred ccHHHHHHHHHH--cC--CEEEEEcCC-----------CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEecc
Q psy886 729 KEVFDSIARCRA--AG--IRVIVITGD-----------NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMG 787 (962)
Q Consensus 729 ~~v~eaI~~l~~--AG--I~v~MiTGD-----------~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg 787 (962)
+...+..+.+++ .+ +.+ ..+|+ +......+++++||-.+ |..++-..++.|++|||||
T Consensus 192 ~~~~~~~~~l~~~~~~~~~~~-~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~ 270 (304)
T 3l7y_A 192 EESAQIMKAIADYKTSQRLVG-TASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA 270 (304)
T ss_dssp GGHHHHHHHHHTSTTTTTEEE-EECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT
T ss_pred HHHHHHHHHHHHhcCCCeEEE-EEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC
Confidence 455666677663 22 332 33443 44466778899998653 2333444467899999999
Q ss_pred ChhHHHHhhcccccccCChhHHHHHHH
Q psy886 788 SGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 788 ~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
++.+..|++||.|..+++=..+.++|+
T Consensus 271 na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 271 NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 999999999999988776667777776
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=87.42 E-value=0.28 Score=51.86 Aligned_cols=63 Identities=10% Similarity=0.093 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
+......+++.+||-.+ |..++-.-++.|++|||||++.+..|++||.|..+++=..+.++|+
T Consensus 212 K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 212 KWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 44556777899998653 2333434457899999999999999999999998877777877775
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=87.42 E-value=0.53 Score=47.66 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=39.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 47999999999999999999999999999999999999984
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=86.96 E-value=0.78 Score=45.71 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 134 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 134 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH
Confidence 45789999999999999999999999999889898998874
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=86.73 E-value=0.89 Score=47.14 Aligned_cols=41 Identities=15% Similarity=-0.069 Sum_probs=37.0
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 56889999999999999999999999999988888887764
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=86.08 E-value=0.17 Score=53.33 Aligned_cols=63 Identities=19% Similarity=0.321 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
+......+++.+|+..+ |..++-..++.|++|||||++.+..|++||.|..+++=..+.++|+
T Consensus 198 K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 198 KGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred hHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 55666778999998653 2333334457999999999999999999999987766666666654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=85.67 E-value=0.75 Score=45.06 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=38.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDN-KATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~-~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 79999999999985
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=85.62 E-value=0.36 Score=48.61 Aligned_cols=42 Identities=17% Similarity=0.368 Sum_probs=38.7
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 357899999999999999999999999999999999999984
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.35 E-value=0.49 Score=47.66 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=36.4
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDN---KATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~---~~TA~~IA~~~GI~ 766 (962)
+.+++.+.++.|++.|+++.++|+.. ...+..+.+.+|+.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 47999999999999999999999999 88888888888874
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=85.29 E-value=0.57 Score=47.64 Aligned_cols=41 Identities=17% Similarity=0.123 Sum_probs=38.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 46899999999999999999999999999999999999984
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=84.35 E-value=0.8 Score=45.56 Aligned_cols=75 Identities=7% Similarity=0.048 Sum_probs=53.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-Ccccc------CCC----------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDTT------GKS---------------------- 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~~------g~~---------------------- 776 (962)
++.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+... +.... ++.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~i 168 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGL 168 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHcCCChhHeEEE
Confidence 35789999999999999999999998 455667778887421 10000 000
Q ss_pred ---------CCcCcEEEeccChhHHHHhhccccccc
Q psy886 777 ---------YSKAEIGIAMGSGTAVAKSASEMVLAD 803 (962)
Q Consensus 777 ---------l~~AdVGIAmg~gtdvAkeaADivL~d 803 (962)
++.|+++++|+++.+..+ .||.|+.+
T Consensus 169 GD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~ 203 (221)
T 2wf7_A 169 EDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPD 203 (221)
T ss_dssp ESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESS
T ss_pred eCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcC
Confidence 137999999996666566 78988743
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=84.31 E-value=0.96 Score=46.11 Aligned_cols=40 Identities=13% Similarity=0.290 Sum_probs=36.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.|++.+.++.|++.|+++.++|+.....+..+-+++|+.
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 5789999999999999999999999998888888888873
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=84.26 E-value=0.65 Score=46.29 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=36.5
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+.+++.+.++.|++.|+++.++|+........+.+.+|+.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 4689999999999999999999999999999998888874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=84.24 E-value=1.2 Score=46.88 Aligned_cols=85 Identities=12% Similarity=0.182 Sum_probs=62.3
Q ss_pred cHHHHHHHHHHcCCEEEEEcC--------------------CCHHHHHHHHHHcCCCCC------CccccCCCCCcCcEE
Q psy886 730 EVFDSIARCRAAGIRVIVITG--------------------DNKATAEAICRRIGVFTE------EEDTTGKSYSKAEIG 783 (962)
Q Consensus 730 ~v~eaI~~l~~AGI~v~MiTG--------------------D~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVG 783 (962)
...++.+.+++.|++..+.+- +++.....+++++|+... |...+-..++.|++|
T Consensus 170 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~ 249 (289)
T 3gyg_A 170 NLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG 249 (289)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE
T ss_pred HHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE
Confidence 345666777888887655332 456777888999998543 233344456899999
Q ss_pred EeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 784 IAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
++||.+.+..++.||.++.+.+-..+.++++
T Consensus 250 ~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 250 YLLKNATQEAKNLHNLITDSEYSKGITNTLK 280 (289)
T ss_dssp EECTTCCHHHHHHCCCBCSSCHHHHHHHHHH
T ss_pred EEECCccHHHHHhCCEEcCCCCcCHHHHHHH
Confidence 9999999999999999988776667777765
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=84.22 E-value=0.51 Score=49.85 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhccc--ccccCChhHHHHHHH
Q psy886 752 NKATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEM--VLADDNFSSIVAAVE 814 (962)
Q Consensus 752 ~~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADi--vL~dd~f~~iv~ai~ 814 (962)
+......+++.+||-.+ |..++-.-++.|++|||||++.+..|++||. |..+++=..+.++|+
T Consensus 210 K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 210 KGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 45566778899998543 2333444567999999999999999999994 444555566666665
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=83.06 E-value=1.8 Score=43.41 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=49.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-Cccc------cCC----C------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-EEDT------TGK----S------------------ 776 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-~~~~------~g~----~------------------ 776 (962)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+... +... .++ .
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~v 169 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAI 169 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHTSCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEE
Confidence 3689999999999999999999999754 7778888887431 1011 111 0
Q ss_pred ---------CCcCcEEEeccChhHHHHhhccccccc
Q psy886 777 ---------YSKAEIGIAMGSGTAVAKSASEMVLAD 803 (962)
Q Consensus 777 ---------l~~AdVGIAmg~gtdvAkeaADivL~d 803 (962)
.+.|+++++|.++.+..+ .||.|+-+
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s 204 (233)
T 3nas_A 170 EDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQ 204 (233)
T ss_dssp ECSHHHHHHHHHTTCEEEECC--------CSEECSS
T ss_pred eCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCC
Confidence 148999999995555455 78888743
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=83.01 E-value=17 Score=35.46 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=14.2
Q ss_pred CcccCCceEEEEEEEe
Q psy886 477 GTLTTNQMSVSRMFIF 492 (962)
Q Consensus 477 GTLT~n~m~v~~~~~~ 492 (962)
||||+|+++|.++...
T Consensus 1 GTLT~G~p~V~~v~~~ 16 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVL 16 (185)
T ss_dssp CCCCSCCCEEEEEEEC
T ss_pred CCCcCCcEEEEEEEec
Confidence 8999999999998654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=81.86 E-value=2.3 Score=43.05 Aligned_cols=41 Identities=10% Similarity=0.223 Sum_probs=32.9
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 35789999999999999999999999988877777776 764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=81.64 E-value=1.4 Score=44.74 Aligned_cols=40 Identities=10% Similarity=0.226 Sum_probs=34.2
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.+++.+.++.|++.|+++.++|+.....+...-+. |+.
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH
Confidence 5689999999999999999999999887777766666 764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=80.12 E-value=1.7 Score=42.60 Aligned_cols=42 Identities=10% Similarity=0.306 Sum_probs=37.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNK---ATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~---~TA~~IA~~~GI~ 766 (962)
-++.|++.++++.|+++|+++.++|+-.. ..+..+-+.+|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 36899999999999999999999997665 8889999999984
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=80.04 E-value=1.6 Score=44.59 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=38.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 56899999999999999999999999999999999999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 962 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-65 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 9e-36 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-09 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-06 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-31 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 5e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-30 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-19 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-17 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-17 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-11 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 8e-06 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 216 bits (551), Expect = 5e-65
Identities = 134/240 (55%), Positives = 170/240 (70%), Gaps = 1/240 (0%)
Query: 484 MSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMC 543
MSV +MFI DK++G S EF ITGSTY P G+V N I+ ++ L EL TIC +C
Sbjct: 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALC 60
Query: 544 NDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWK 603
NDS++DFNE K +EKVGEATETAL L EK+N FN L + E+A A + K
Sbjct: 61 NDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMK 120
Query: 604 KEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTA 663
KEFTLEFSRDRKSMS YC+P KSS+ + G K+FVKGAPEGV++RC + R+G+ + P+T
Sbjct: 121 KEFTLEFSRDRKSMSVYCSPAKSSR-AAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTG 179
Query: 664 TLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGM 723
+K +IL + +++GTGRDTLRCL LAT D P K E+M L DS++F YE +LTFVGVVGM
Sbjct: 180 PVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 139 bits (352), Expect = 9e-36
Identities = 98/134 (73%), Positives = 109/134 (81%), Gaps = 2/134 (1%)
Query: 362 MSETEEIKTPLQQKLDEFGEQLSKVISIICVAVWAINIGHFNDPAHGGSWIKGAVYYFKI 421
+ TE+ KTPLQQKLDEFGEQLSKVIS+ICVAVW INIGHFNDP HGGSWI+GA+YYFKI
Sbjct: 124 PAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKI 183
Query: 422 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDK--TGTL 479
AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLG + +
Sbjct: 184 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLI 243
Query: 480 TTNQMSVSRMFIFD 493
++N V +F+
Sbjct: 244 SSNVGEVVCIFLTA 257
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.7 bits (144), Expect = 1e-09
Identities = 77/194 (39%), Positives = 91/194 (46%), Gaps = 29/194 (14%)
Query: 790 TAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGL 849
T +A M + S+ + GRAIYNNMKQFIRYLISSN+GEVV IFLTAALGL
Sbjct: 202 TCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL 261
Query: 850 PEALIK-KISTTN-------------------------RGKKKKLSYNFLDISLLGPAIH 883
PEALI ++ N R K+ L +L + +
Sbjct: 262 PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGY 321
Query: 884 YQVDLTGGPDQVYLSGLPDSIYYLPTTVFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMA 943
G + T TH M C F+GLDC IF P PMTMA
Sbjct: 322 VGAATVGA---AAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMA 378
Query: 944 LSVLVTIEMLNAMN 957
LSVLVTIEM NA+N
Sbjct: 379 LSVLVTIEMCNALN 392
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 49.3 bits (117), Expect = 1e-06
Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 70 FAVLFCLCPQVLALFEEHEDFNSTLTSFVEPFVILLILIANAIVGVWQERNAESAIEALK 129
+ L + + E+ T+T+FVEPFVILLILIANAIVGVWQERNAE+AIEALK
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 130 EYEPEMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLI 175
EYEP + + P G+++ I LI
Sbjct: 121 EYEPAATEQDK--------------TPLQQKLDEFGEQLSKVISLI 152
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 117 bits (293), Expect = 2e-31
Identities = 85/115 (73%), Positives = 103/115 (89%)
Query: 248 EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 307
EMGKV R D+ VQ+++A++IVPGDIVEV+VGDK+PADIR++ I STT+R+DQSILTGES
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 60
Query: 308 VSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEM 362
VSVIKHT+ VPDPRAVNQDKKN+LFSGTN+AAGKA GIV TG++T IGKIR +M
Sbjct: 61 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 78.6 bits (193), Expect = 5e-18
Identities = 55/75 (73%), Positives = 68/75 (90%)
Query: 134 EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGES 193
EMGKV R D+ VQ+++A++IVPGDIVEV+VGDK+PADIR++ I STT+R+DQSILTGES
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 60
Query: 194 VSVIKHTDAVPDPRA 208
VSVIKHT+ VPDPRA
Sbjct: 61 VSVIKHTEPVPDPRA 75
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 117 bits (294), Expect = 2e-30
Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 43/249 (17%)
Query: 484 MSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMC 543
M+V+ M+ ++I E + + T L I +C
Sbjct: 2 MTVAHMWFDNQI---------HEADTTEDQSGATFDKRS--------PTWTALSRIAGLC 44
Query: 544 NDSAIDFNEFK---QAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVET 600
N + + + G+A+E+AL+ E + +
Sbjct: 45 NRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGS----------------VRKMRD 88
Query: 601 KWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFP 660
+ K + F+ K S + L +KGAPE +L+RC+ + ++ P
Sbjct: 89 RNPKVAEISFNSTNKYQLSIH----EREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144
Query: 661 LTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLA-DSTKFASYEVNLTFVG 719
L +++ + + G R LG + P D+ + L FVG
Sbjct: 145 LDKEMQDAFQNAYLELG--GLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVG 202
Query: 720 VVGMLDPPR 728
++ M+D
Sbjct: 203 LMSMIDHHH 211
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 82.8 bits (204), Expect = 3e-19
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 26/128 (20%)
Query: 713 VNLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG-------- 764
+ T G D ++ ++ + GI+V +ITGDN +AEAI R +
Sbjct: 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEV 67
Query: 765 ------------------VFTEEEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNF 806
F + + ++A++GIA+GSG+ VA + ++VL D+
Sbjct: 68 LPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDL 127
Query: 807 SSIVAAVE 814
+VAA++
Sbjct: 128 RDVVAAIQ 135
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 83.3 bits (205), Expect = 1e-17
Identities = 37/317 (11%), Positives = 68/317 (21%), Gaps = 86/317 (27%)
Query: 450 AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITG 509
+ L LG S I + + R+F DKI
Sbjct: 21 VSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRN-RIFQKDKI-------------- 65
Query: 510 STYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEATETALI 569
LN K G + I D +K+ A +
Sbjct: 66 ----------LNKLKSLGLNSNWDMLFIVFSIHLIDIL----------KKLSHDEIEAFM 105
Query: 570 VLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKL 629
E + Q++ T F L + + + +
Sbjct: 106 YQDEPVE----------------LKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIY- 148
Query: 630 GSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLA 689
+ A + +LK + L ++ + L
Sbjct: 149 -----AALEEFATTELHVSDATL----------FSLKGALWTLAQE------VYQEWYLG 187
Query: 690 TADNPLKPEDMNLADSTKFASYEVNLTFVGVVGMLDP--PRKEVFDSIARCRAAGIRVIV 747
+ + + G + P EV + + AG + +
Sbjct: 188 SKLYEDVEKKI-----------ARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGI 236
Query: 748 ITGDNKATAEAICRRIG 764
TG +G
Sbjct: 237 ATGRPYTETVVPFENLG 253
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 77.9 bits (191), Expect = 4e-17
Identities = 38/65 (58%), Positives = 45/65 (69%)
Query: 714 NLTFVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTT 773
+ T LDPPRKEV SI CR AGIRVI+ITGDNK TA AICRRIG+F E E+
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 774 GKSYS 778
++Y+
Sbjct: 68 DRAYT 72
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 61.3 bits (148), Expect = 2e-11
Identities = 36/38 (94%), Positives = 38/38 (100%)
Query: 779 KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEG 816
KAEIGIAMGSGTAVAK+ASEMVLADDNFS+IVAAVEEG
Sbjct: 131 KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 45.7 bits (107), Expect = 8e-06
Identities = 7/74 (9%), Positives = 23/74 (31%), Gaps = 6/74 (8%)
Query: 757 EAICRRIGVFTEEEDTTGKSYS------KAEIGIAMGSGTAVAKSASEMVLADDNFSSIV 810
++ + + G S + +++ A + + L +F I
Sbjct: 151 PSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIR 210
Query: 811 AAVEEGRAIYNNMK 824
+E + + ++
Sbjct: 211 KEIENVKEVQEWLQ 224
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 962 | |||
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.97 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.95 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.94 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.85 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.83 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.79 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.71 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 97.54 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 97.2 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 96.86 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 96.77 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 96.58 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 95.61 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 95.42 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 94.67 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 94.62 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 94.61 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 93.57 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 92.26 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 88.84 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 88.6 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 88.35 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 85.81 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 83.15 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=9.4e-32 Score=281.67 Aligned_cols=239 Identities=56% Similarity=0.923 Sum_probs=195.2
Q ss_pred eEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccccCceEEecCh
Q psy886 484 MSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEFKQAFEKVGEA 563 (962)
Q Consensus 484 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~~~~~~~~g~p 563 (962)
|+|.++++.+...+......++.++|.+|.|.|.+...+........+.+..++.++++||++.+......+.+...|+|
T Consensus 1 MtV~~m~v~~~~~~~~~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~p 80 (239)
T d1wpga3 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEA 80 (239)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCH
T ss_pred CeeEEEEEEeeecCCcccceEEEEEeEeeCCceEEEECCcCcCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCC
Confidence 78889888776655444556899999999999998887777766677889999999999999998766555678899999
Q ss_pred hHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeCChH
Q psy886 564 TETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKGAPE 643 (962)
Q Consensus 564 ~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KGA~e 643 (962)
||.||+.++.+.|+...........+.........+..|++++++||||+|||||++++.+++... ...+.+|+|||||
T Consensus 81 TE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~-~~~~~l~vKGApe 159 (239)
T d1wpga3 81 TETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA-AVGNKMFVKGAPE 159 (239)
T ss_dssp HHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGG-GGCSEEEEEECHH
T ss_pred CcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcc-cceeEEEEeCChH
Confidence 999999999999986655444333333334445567889999999999999999999987543211 1257899999999
Q ss_pred HHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEEecc
Q psy886 644 GVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGVVGM 723 (962)
Q Consensus 644 ~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~i 723 (962)
.||++|+++..+++..+++++.++++.+.+++++++++|+||||+|||+++..+......+......+|+||+|+|++||
T Consensus 160 ~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 160 GVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred HHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 99999999999999999999999999999999877899999999999998876554444444456678999999999986
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=4.9e-29 Score=256.06 Aligned_cols=209 Identities=21% Similarity=0.295 Sum_probs=149.5
Q ss_pred ceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHHHHHhhccCCccccccc---cCceEE
Q psy886 483 QMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELGTICIMCNDSAIDFNEF---KQAFEK 559 (962)
Q Consensus 483 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lcn~~~~~~~~~---~~~~~~ 559 (962)
-|+|+++|+++..+..+ +..+.+... . ....+.+..+..++++||++.++.+.. ...+..
T Consensus 1 ~MTV~~~w~~~~~~~~~---------~~~~~~~~~-------~-~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~ 63 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEAD---------TTEDQSGAT-------F-DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDT 63 (214)
T ss_dssp CCEEEEEEETTEEEECC---------CC------C-------C-CCCSHHHHHHHHHHHHSCCCCCC----------CCC
T ss_pred CeEEEEEEECCEEEEcC---------CCCcCCCcc-------c-ccCCHHHHHHHHHHHHhCCCccccCCCCCccccccc
Confidence 39999999987654221 111111110 0 123466778889999999998765432 123456
Q ss_pred ecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEe
Q psy886 560 VGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVK 639 (962)
Q Consensus 560 ~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~K 639 (962)
.|||+|.||+.++.+.|... ...+..|+++.++||+|+||||+++++.+.+ ++.+++|+|
T Consensus 64 ~GdptE~ALl~~a~~~~~~~----------------~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~----~~~~~~~~K 123 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSV----------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDN----PQSHVLVMK 123 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCH----------------HHHHHTSCEEEEEC------CEEEEEECSSC----TTSEEEEEE
T ss_pred ccChHHHHHHHHHHHhCCCH----------------HHHHhhCcEeeeEeeCCCCCEEEEEEEccCC----CCceeEEec
Confidence 89999999999999876521 1256789999999999999999999986532 226789999
Q ss_pred CChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCcccccc-ccccccccccCCeEEE
Q psy886 640 GAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNL-ADSTKFASYEVNLTFV 718 (962)
Q Consensus 640 GA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~-~~~~~~~~~e~~l~~l 718 (962)
||||.||++|+++..+|...+++++.++++++.+++|+ ++|+||||+|||+++..+..... .+....+..|+||+|+
T Consensus 124 GApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a--~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~fl 201 (214)
T d1q3ia_ 124 GAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELG--GLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFV 201 (214)
T ss_dssp ECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHH--HTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEE
T ss_pred CCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHh--hCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEE
Confidence 99999999999999999999999999999999999996 99999999999998765422211 1122345668999999
Q ss_pred EEecccCCCCcc
Q psy886 719 GVVGMLDPPRKE 730 (962)
Q Consensus 719 Gl~~i~D~lR~~ 730 (962)
|++||+||||+.
T Consensus 202 Glvgi~DPPR~~ 213 (214)
T d1q3ia_ 202 GLMSMIDHHHHH 213 (214)
T ss_dssp EEEEEESCCSCC
T ss_pred EEEEEEeCCCCC
Confidence 999999999974
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=2.1e-28 Score=221.26 Aligned_cols=114 Identities=74% Similarity=1.112 Sum_probs=105.4
Q ss_pred cceeeeCCccceeeecccccCCCCEEEeCCCCeecceEEEEeecCCeEEEEecCCCCCCcceeccCCCCCCCccCCCCCc
Q psy886 249 MGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDPRAVNQDKK 328 (962)
Q Consensus 249 ~a~ViR~g~~~~~~I~~~~Lv~GDIV~l~~Gd~vPaD~~ll~~~~~~l~VdeS~LTGEs~pv~K~~~~~~~~~~~~~~~~ 328 (962)
.++|+|+|+...++|++++|||||||.|++||+|||||+|+++++.++.||||+|||||.|+.|.+.+..+......++.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 57999999865689999999999999999999999999999888888999999999999999999887777766777889
Q ss_pred ceEecCceeeeceEEEEEEEeccchhhHHHHhhc
Q psy886 329 NILFSGTNVAAGKARGIVMGTGLNTAIGKIRTEM 362 (962)
Q Consensus 329 n~v~aGT~v~~G~~~~vV~~tG~~T~~gki~~~~ 362 (962)
|++|+||.|.+|+++++|++||.+|.+|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 9999999999999999999999999999998763
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=1e-25 Score=259.36 Aligned_cols=147 Identities=50% Similarity=0.658 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCccchhHH-H----hhCcccccccccCCCCcCccchh---------
Q psy886 816 GRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLPEALIKKI-S----TTNRGKKKKLSYNFLDISLLGPA--------- 881 (962)
Q Consensus 816 gR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q-L----~~d~~~a~al~~e~~~~~~m~~p--------- 881 (962)
||.+|.|++|+++|+++.|+++++.++++.+++.|.||+|+| | ++|.+|+++|++||||+++|+||
T Consensus 228 g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li 307 (472)
T d1wpga4 228 GRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLI 307 (472)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSS
T ss_pred HHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCcccc
Confidence 455677888899999999999999999999999999999999 3 99999999999999999999987
Q ss_pred ---HHHHHHHHhhhHH-----hh-hcCCCcEEEeccchhhhhccccccCCCCccCCCccccccCccchhhHHHHHHHHHH
Q psy886 882 ---IHYQVDLTGGPDQ-----VY-LSGLPDSIYYLPTTVFATHHMSCLGGGDEFKGLDCHIFHDPHPMTMALSVLVTIEM 952 (962)
Q Consensus 882 ---~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~ 952 (962)
.++++...|.... .+ +...........++....+..+|..+...+.+..++.....+++|++|++++++|+
T Consensus 308 ~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~ 387 (472)
T d1wpga4 308 SGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEM 387 (472)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHH
Confidence 2444444443111 11 00000000001111233344455544444555556666667889999999999999
Q ss_pred HHHhhccCCC
Q psy886 953 LNAMNRYGRH 962 (962)
Q Consensus 953 ~~~~~~r~~~ 962 (962)
||++++||++
T Consensus 388 ~~~~~~rs~~ 397 (472)
T d1wpga4 388 CNALNSLSEN 397 (472)
T ss_dssp HHHHTTSCSS
T ss_pred HHHHHHhcCC
Confidence 9999999863
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=5.2e-22 Score=193.47 Aligned_cols=92 Identities=77% Similarity=1.110 Sum_probs=83.1
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCCcccc-------------------------------
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTT------------------------------- 773 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~~~~~------------------------------- 773 (962)
||||++++++|+.||++||+|||+|||++.||++||+++||+.++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 9999999999999999999999999999999999999999976543211
Q ss_pred ---------------------------CCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHh
Q psy886 774 ---------------------------GKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 774 ---------------------------g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~g 816 (962)
.++|++||||||||+|+++||++||+||++|+|++|+++|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 1122599999999999999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.83 E-value=8e-22 Score=184.22 Aligned_cols=98 Identities=31% Similarity=0.448 Sum_probs=78.6
Q ss_pred EEEEecccCCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC--------------------------CCc
Q psy886 717 FVGVVGMLDPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT--------------------------EEE 770 (962)
Q Consensus 717 ~lGl~~i~D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~--------------------------~~~ 770 (962)
..+.++++|++|++++++|+.||++||++||+|||+++||.++|++|||-. +++
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~~~~~p~~k~~~v~~~q~~~~v~~vGDg 91 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDG 91 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCHHHHHHHHHHHTTTSCEEEEECS
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhhhccccchhHHHHHHHHHHcCCEEEEEeCC
Confidence 345789999999999999999999999999999999999999999999932 112
Q ss_pred cccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 771 DTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 771 ~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
.++.+.|++||||||||+|+++++++||+||++|+|++|+++|+
T Consensus 92 ~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 92 INDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp SSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred CCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 23344568999999999999999999999999999999999985
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.79 E-value=2.2e-24 Score=241.08 Aligned_cols=270 Identities=13% Similarity=0.044 Sum_probs=170.1
Q ss_pred CchhhhhcCCeeEEEecCCCcccCCceEEEEEEEeccccCCCCCcceEEEeCCccccCcceecCCCccCCCChHHHHHHH
Q psy886 458 SLPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKIEGSDSSFLEFEITGSTYEPIGDVFLNGSKIKGADYETLHELG 537 (962)
Q Consensus 458 ~~~~~E~LG~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 537 (962)
-+.+.|+||..+++|+|||||+|.|+|+++.+....... .....++ + .+ .++.
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~---------~~k~~g~----------------n-~~-~dl~ 81 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILN---------KLKSLGL----------------N-SN-WDML 81 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHH---------HHHHTTC----------------C-CH-HHHH
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhH---------hhhhcCC----------------C-hh-HHHH
Confidence 356789999999999999999999999764432111000 0000000 0 00 1233
Q ss_pred HHHhhccCCccccccccCceEEecChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceE
Q psy886 538 TICIMCNDSAIDFNEFKQAFEKVGEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSM 617 (962)
Q Consensus 538 ~~~~lcn~~~~~~~~~~~~~~~~g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m 617 (962)
....+|+.+... ...+++++.+++...+..+. .....++.|....++||++.+|+|
T Consensus 82 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~i~f~~~~k~~ 137 (380)
T d1qyia_ 82 FIVFSIHLIDIL--------KKLSHDEIEAFMYQDEPVEL----------------KLQNISTNLADCFNLNEQLPLQFL 137 (380)
T ss_dssp HHHHHHHHHHHH--------TTSCHHHHHHHHHCSSCHHH----------------HHTTSGGGCSSCCCCCTTTTHHHH
T ss_pred HHHHHHHHHHHH--------hhcCCCcHHHHHHHHhhccc----------------hHHHHHHhccccccCCcchHHHHH
Confidence 334445533221 12467788777654332211 011135567888899999999999
Q ss_pred EEEEecCCCCCCCCCCCEEEEeCChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCc
Q psy886 618 SSYCTPLKSSKLGSSGPKLFVKGAPEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKP 697 (962)
Q Consensus 618 svv~~~~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~ 697 (962)
++....... .+..+.||+++.+... +..+..+...+.+++ ++|+|++++|++..+..+
T Consensus 138 ~~~~~~~~~------~~~~~~~~a~~~~~~~--------------~~~~~~~~~~~~~~a--~~~~r~l~~~~~~~~~~~ 195 (380)
T d1qyia_ 138 DNVKVGKNN------IYAALEEFATTELHVS--------------DATLFSLKGALWTLA--QEVYQEWYLGSKLYEDVE 195 (380)
T ss_dssp TTCCSSHHH------HHHHHHHHHHHHTTCS--------------CCGGGSTTCHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccc------hhHhhhhccHhhcCCc--------------HHHHHHHHhHHHHHH--HHHHHHHHHhhhcccccc
Confidence 876543210 2334456666554211 112233344455664 899999999987543211
Q ss_pred cccccccccccccccCCeEEEEEecccCCCC--ccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC---Ccc-
Q psy886 698 EDMNLADSTKFASYEVNLTFVGVVGMLDPPR--KEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE---EED- 771 (962)
Q Consensus 698 ~~~~~~~~~~~~~~e~~l~~lGl~~i~D~lR--~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~---~~~- 771 (962)
. ....+....|+++.+||+| +|++++++.||++||+++|+|||++.+|.++++++||... ...
T Consensus 196 ~-----------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 196 K-----------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp C-----------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred c-----------ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE
Confidence 1 1113344568899999955 5999999999999999999999999999999999999531 000
Q ss_pred -------------------------------------------------------ccCC------CCCcCc---EEEecc
Q psy886 772 -------------------------------------------------------TTGK------SYSKAE---IGIAMG 787 (962)
Q Consensus 772 -------------------------------------------------------~~g~------~l~~Ad---VGIAmg 787 (962)
+.|. +.++|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 0000 014899 999999
Q ss_pred -ChhHHHHh----hcccccccCChhHHHHHH
Q psy886 788 -SGTAVAKS----ASEMVLADDNFSSIVAAV 813 (962)
Q Consensus 788 -~gtdvAke----aADivL~dd~f~~iv~ai 813 (962)
+|++++++ .||+|+ |++..|.+.+
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 89987766 899999 7788776554
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.71 E-value=3.6e-18 Score=153.60 Aligned_cols=73 Identities=73% Similarity=1.145 Sum_probs=66.0
Q ss_pred CeEEEEECCCccEEEEeCCCCCCCCEEEEcCCCccCCCceEEeeecceeeeecccccCCCcceeecCCCCCCc
Q psy886 134 EMGKVIRGDKSGVQKVRAKEIVPGDIVEVSVGDKIPADIRLIKIYSTTIRIDQSILTGESVSVIKHTDAVPDP 206 (962)
Q Consensus 134 ~~~~v~r~~~~~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~v~~G~~~~~~vdes~lTGEs~Pv~k~~g~~~~~ 206 (962)
+.++|+|+|+...++|++++|+|||+|.|++|++|||||+|++|++.+++||||+|||||.|+.|.+++.+..
T Consensus 1 e~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~ 73 (115)
T d1wpga1 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDP 73 (115)
T ss_dssp SEEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCT
T ss_pred CceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccc
Confidence 3689999998435789999999999999999999999999999999999999999999999999998766553
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.54 E-value=4.9e-05 Score=75.86 Aligned_cols=41 Identities=27% Similarity=0.421 Sum_probs=37.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.+.+++.+++++|+++|++++++||.....+..+++.+++.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~ 59 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 59 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCC
Confidence 46788999999999999999999999999999999999874
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.20 E-value=0.00041 Score=69.00 Aligned_cols=42 Identities=17% Similarity=0.244 Sum_probs=38.4
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
.++.+++.+++++|++.|+++++.||.+...+..+++.+|+.
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~ 60 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN 60 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCC
Confidence 456789999999999999999999999999999999999873
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=96.86 E-value=0.00044 Score=65.89 Aligned_cols=86 Identities=15% Similarity=0.234 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-----------------------------CccccCCCCCcCcEE
Q psy886 733 DSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-----------------------------EEDTTGKSYSKAEIG 783 (962)
Q Consensus 733 eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-----------------------------~~~~~g~~l~~AdVG 783 (962)
.+|+.+++.|+.+.++||++...+...++++++..- |...+-+.|+.|++|
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~~~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~s 118 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTS 118 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccccccccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeE
Confidence 489999999999999999999999999999998521 011122234699999
Q ss_pred EeccChhHHHHhhcccccccCC----hhHHHHHHHHhHH
Q psy886 784 IAMGSGTAVAKSASEMVLADDN----FSSIVAAVEEGRA 818 (962)
Q Consensus 784 IAmg~gtdvAkeaADivL~dd~----f~~iv~ai~~gR~ 818 (962)
+||+.+++.+|++||+|+.... +.-+++.|-..+.
T Consensus 119 iap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~ 157 (177)
T d1k1ea_ 119 FAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQG 157 (177)
T ss_dssp EECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred EEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHHCC
Confidence 9999999999999999998765 6666666654333
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.77 E-value=0.00088 Score=66.20 Aligned_cols=81 Identities=14% Similarity=0.283 Sum_probs=62.6
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC-----------CccccC--------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE-----------EEDTTG-------------------- 774 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~-----------~~~~~g-------------------- 774 (962)
+++|++.+.|+.||+.|++++++||.....+..+++.+||... ++..+|
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~ 161 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 161 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccchHHHHHHHH
Confidence 3689999999999999999999999999999999999998421 111111
Q ss_pred -------------------CCCCcCcEEEecc--ChhHHHHhhcccccccCChhH
Q psy886 775 -------------------KSYSKAEIGIAMG--SGTAVAKSASEMVLADDNFSS 808 (962)
Q Consensus 775 -------------------~~l~~AdVGIAmg--~gtdvAkeaADivL~dd~f~~ 808 (962)
+.++.|+++||+| ......++.||.++ ++|..
T Consensus 162 ~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i--~~f~e 214 (217)
T d1nnla_ 162 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVE 214 (217)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGG
T ss_pred HhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEe--CCHHH
Confidence 0125899999998 35667778899887 34554
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=96.58 E-value=0.00043 Score=68.71 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC----------Ccc--------------ccCC------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE----------EED--------------TTGK------ 775 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~----------~~~--------------~~g~------ 775 (962)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+... +.. ..+.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 154 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVI 154 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccCCHHHHHHHH
Confidence 4789999999999999999999999999999999999987421 000 0000
Q ss_pred ---------------------CCCcCcEEEeccCh-hHHHHhhcccccccCChhHHHHHHHHhHHHHHHHH
Q psy886 776 ---------------------SYSKAEIGIAMGSG-TAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMK 824 (962)
Q Consensus 776 ---------------------~l~~AdVGIAmg~g-tdvAkeaADivL~dd~f~~iv~ai~~gR~i~~ni~ 824 (962)
.+++||+++|++.+ ..+.++..+.+ .-++|..|+..+++-..+.+.|+
T Consensus 155 ~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 155 HELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp HHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHHHhh
Confidence 01489999999954 44445445433 35789999999988877777664
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=95.61 E-value=0.0091 Score=60.38 Aligned_cols=42 Identities=24% Similarity=0.302 Sum_probs=38.5
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
.+-+++.+++++|+++||++++.||-+...+..+.+++++..
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~ 62 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 62 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcC
Confidence 467889999999999999999999999999999999998753
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.42 E-value=0.0026 Score=61.55 Aligned_cols=88 Identities=16% Similarity=0.297 Sum_probs=70.5
Q ss_pred CCCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCC--------Cc---------cccC-------------
Q psy886 725 DPPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTE--------EE---------DTTG------------- 774 (962)
Q Consensus 725 D~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~--------~~---------~~~g------------- 774 (962)
.++.+++.+.++.++..|..+.++||.....+....++.++... +. ...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI 153 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhccccccccccccccccccccccchhhhHHHH
Confidence 46789999999999999999999999999999999999887421 00 0000
Q ss_pred ------------------CCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHH
Q psy886 775 ------------------KSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAV 813 (962)
Q Consensus 775 ------------------~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai 813 (962)
+.++.|++|||| ++.+..|+.||+|+-.+|+..|+++|
T Consensus 154 ~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 154 EGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred hcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 011489999999 77888999999999888888887654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.008 Score=60.79 Aligned_cols=39 Identities=10% Similarity=0.200 Sum_probs=35.4
Q ss_pred CCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 727 PRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 727 lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
+.+.+.+++++|+++|+++++.||-+...+..+.+++++
T Consensus 21 ~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~ 59 (269)
T d1rlma_ 21 NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKD 59 (269)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTT
T ss_pred ChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 356799999999999999999999999999998888876
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=94.62 E-value=0.021 Score=57.91 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=36.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGV 765 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI 765 (962)
.+-+.+.+++++|+++||++++.||=+...+..+.+++|+
T Consensus 18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~ 57 (285)
T d1nrwa_ 18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGI 57 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence 4568899999999999999999999999999999999886
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=94.61 E-value=0.023 Score=57.38 Aligned_cols=39 Identities=21% Similarity=0.168 Sum_probs=35.4
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIG 764 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~G 764 (962)
++-+.+.+++++|+++|++++..||-+...+..++++++
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~ 66 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEEN 66 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhC
Confidence 467889999999999999999999999999999888765
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.57 E-value=0.045 Score=52.05 Aligned_cols=89 Identities=11% Similarity=0.193 Sum_probs=65.9
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------cc-------------------------
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFTEE---------ED------------------------- 771 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~~~---------~~------------------------- 771 (962)
+..++....++.+ +.+.+++.+|+.........+...++.... ..
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e 147 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYR 147 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCE
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecccccccccccchhhHHHHHHHhcccccc
Confidence 3466677777665 578999999999999999999999874310 00
Q ss_pred --------ccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHHHh
Q psy886 772 --------TTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEEG 816 (962)
Q Consensus 772 --------~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~g 816 (962)
++-+-++.|++||||+.+.++.++++|++.. .|+..+++++..-
T Consensus 148 viaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 148 VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp EEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred eEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHHHH
Confidence 0000125999999999888999999999875 6688888877653
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=92.26 E-value=0.038 Score=55.30 Aligned_cols=37 Identities=32% Similarity=0.413 Sum_probs=32.2
Q ss_pred cCcEEEeccChhHHHHhhcccccccCChhHHHHHHHH
Q psy886 779 KAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVEE 815 (962)
Q Consensus 779 ~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~~ 815 (962)
.|+.||||++|++.+|+.||.|..+++=..+.++|+.
T Consensus 220 ~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 220 HAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp HSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred hCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 7999999999999999999998777777778887753
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=88.84 E-value=0.074 Score=53.27 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=47.9
Q ss_pred HHHHHHHHHHcCCCCC------CccccCCCCCcCcEEEeccChhHHHHhhcccccccCChhHHHHHHH
Q psy886 753 KATAEAICRRIGVFTE------EEDTTGKSYSKAEIGIAMGSGTAVAKSASEMVLADDNFSSIVAAVE 814 (962)
Q Consensus 753 ~~TA~~IA~~~GI~~~------~~~~~g~~l~~AdVGIAmg~gtdvAkeaADivL~dd~f~~iv~ai~ 814 (962)
......+++.+||-.. |..++-+-|+.|++|||||+|++.+|++||.|..+++-..+..+|+
T Consensus 192 ~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 192 GKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred hHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 3444678888887543 2233444568999999999999999999999998888788887775
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| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=88.60 E-value=0.32 Score=46.80 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=37.1
Q ss_pred CCccHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 727 PRKEVFDSIARCRAAG-IRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 727 lR~~v~eaI~~l~~AG-I~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
+-||+.+++++|++.| +++.++|+.....+..+-+..||.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~ 132 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 132 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccc
Confidence 4689999999999987 899999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=88.35 E-value=0.52 Score=41.54 Aligned_cols=106 Identities=10% Similarity=0.124 Sum_probs=61.7
Q ss_pred cChhHHHHHHHHHHcCCCCcccCCCchhhHHHhhhhHHhhhceeeEeecCCCCCceEEEEEecCCCCCCCCCCCEEEEeC
Q psy886 561 GEATETALIVLAEKLNPFNVSKSGLGRREQAIAVRQDVETKWKKEFTLEFSRDRKSMSSYCTPLKSSKLGSSGPKLFVKG 640 (962)
Q Consensus 561 g~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvv~~~~~~~~~~~~~~~~~~KG 640 (962)
.+|...|++.+|++.+...... ..+.....+||....+...+.+ +-..+.+|
T Consensus 30 eHPlakAIv~~Ak~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~g~~~-----------~g~~v~~G 81 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRERD-----------------VQSLHATFVPFTAQSRMSGINI-----------DNRMIRKG 81 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCCCC-----------------TTTTTCEEEEEETTTTEEEEEE-----------TTEEEEEE
T ss_pred CchHHHHHHHHHHHhcCCCccc-----------------cccccccccccccccceEEEEE-----------CCEEEEec
Confidence 4799999999998765422110 1112223456655554433322 22567899
Q ss_pred ChHHHHhcccccccCCeeeeCCHHHHHHHHHHHHHHhcccchhheeeEEeeeCCCCccccccccccccccccCCeEEEEE
Q psy886 641 APEGVLERCTHARIGSQKFPLTATLKNRILDLTRQYGTGRDTLRCLGLATADNPLKPEDMNLADSTKFASYEVNLTFVGV 720 (962)
Q Consensus 641 A~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~glRvl~~A~~~~~~~~~~~~~~~~~~~~~~e~~l~~lGl 720 (962)
++..+.+.+.... ..++++. .+..+++. .+|..++.+| .|-.++|+
T Consensus 82 ~~~~~~~~~~~~g-----~~~~~~~----~~~~~~~~--~~G~Tvv~Va-----------------------~d~~~~G~ 127 (136)
T d2a29a1 82 SVDAIRRHVEANG-----GHFPTDV----DQKVDQVA--RQGATPLVVV-----------------------EGSRVLGV 127 (136)
T ss_dssp CHHHHHHHHHHHT-----CCCCHHH----HHHHHHHH--HTTSEEEEEE-----------------------ETTEEEEE
T ss_pred HHHHHHHHHHHcC-----CCCcHHH----HHHHHHHH--HCCCeEEEEE-----------------------ECCEEEEE
Confidence 9977765432110 1133333 33444443 6787777776 35579999
Q ss_pred ecccCCCC
Q psy886 721 VGMLDPPR 728 (962)
Q Consensus 721 ~~i~D~lR 728 (962)
+++.|++|
T Consensus 128 i~l~D~iK 135 (136)
T d2a29a1 128 IALKDIVK 135 (136)
T ss_dssp EEEEESSC
T ss_pred EEEEeecC
Confidence 99999986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=85.81 E-value=0.4 Score=45.63 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=38.7
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVF 766 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~ 766 (962)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 45799999999999999999999999999999999999995
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=83.15 E-value=0.55 Score=44.64 Aligned_cols=42 Identities=17% Similarity=0.222 Sum_probs=39.1
Q ss_pred CCCccHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCCC
Q psy886 726 PPRKEVFDSIARCRAAGIRVIVITGDNKATAEAICRRIGVFT 767 (962)
Q Consensus 726 ~lR~~v~eaI~~l~~AGI~v~MiTGD~~~TA~~IA~~~GI~~ 767 (962)
++.|++++.++.|++.|+++.++||.....+..+.+++||..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~ 136 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH 136 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh
Confidence 358999999999999999999999999999999999999853
|