Psyllid ID: psy8927

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------
MGNSDTKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDENEGEGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLPSDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEKESAHPGGENENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV
ccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccHHHcccHHHHHHHHHHHHccccccccccccccHHHHHHccccccccHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEccccccccEEEEccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHcccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccEEEEEEEEEEcHHHHHHccccccccHHHHHHccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccHHccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccEEccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEc
ccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHccccHHHHHcccccccccccccccccccccHHHHcccccHHHHHHccccccccccccHHHHHcHHHHHHHHHHHHccccccccccccccHHHHHHHHHccccHHHHHHcccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHEEcccHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHccccccccccccEEEEcccccHcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHccccccHcccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEcccccccEcccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHEEcccccHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHccccccccccccccccEcccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccEEEcccccccEEEEEEcccHHHHHHHHHHHHHHHEHcccccccEccccEEEEEEEEc
MGNSDTKLNFRQAVIQLtsktqpidasdntfwNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYifedmdwrgffwsslpskstsdenegegpdkaedlqsidsCEYIWErgvgfatsparcpahESARTELLKLLLTCFSetiyqppqdasdntfwNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYifedmdwrgffwsslpskstsddnegegstpaedvesvpLAQSLLNAICDllfcpdftvasnkcTCQVFLMLGTQDNLFINYLSrihrdedfQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLlnnpllqtylpnstkkIEFHQELLVLFWKMCDYNKTLTQLAGFSRllnnpllqtylpnstkkIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHlndsradqsrVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHlndsradqsrVGLMHIGVFILLLLSgernfgvrlnkpysaavpmdipvFTGLVLRADQSRVGLMHIGVFILLLLSgernfgvrlnkpysaavpmdipvftgNSINILMEDLKFLYYVLKSSDVLDILVPILYHlndsradqsrVGLMHIGVFILLLLSgernfgvrlnkpysaavpmdipvftgtHADLLMIVFHKVItsghnrlqpLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAfaspaflytgetNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAfaspaflytgetNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYAlsnlpsdsasIHRALSvsggrkrssplpplltsapsspsagvepsspsmegskpalpaepgtlnatladtpgpdkaedlqsidsCEYIWErgvgfatsparcpahESARTELLKLLLTCFSetiyqppqgiekmtekesahpggenenvvakpssisspiqhshprvwtptpewvkswkdklpLQTIMRLLQVLVPQVEKIcidkgltdESEILKFLQHgtlvgllpvphpilirkyqansgtttwFRTYMWGVIYlrnvdppiwydtdvkLFEIQRV
MGNSDTKLNFRQAVIQLtsktqpidaSDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDENEGEGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALsnlpsdsaSIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEKESAHPGGENENVVAKPSsisspiqhshprvwtptpeWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV
MGNSDTKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDENEGEGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGvfilllkkflyyvlKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLPSDSASIHRALSVSGGRKRssplpplltsapsspsaGVEPSSPSMEGSKPALPAEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEKESAHPGGENENVVAKpssisspiqhshpRVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV
***********QAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWS************************IDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWS**************************LAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNL*****************************************************************************IDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQ***************************************RVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEI***
****DTKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWS************************IDSCEYIWERGVGFAT************TELLKLLLTCFSETIY*****ASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVD*******EQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSS*************************LAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLP*********************************************************************************************************************************************************************TPEWVKSWKDKLPLQTIMRLLQVLV*****************ILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQR*
MGNSDTKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLP****************EDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLP*******************ESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLPSDSASIHRA*****************************************LPAEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIE***********************************WTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV
*****TKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSL*******************LQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSL********************ESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLPSD****************************************************************************************************************************************************************WTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV
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MGNSDTKLNFRQAVIQLTSKTQPIDASDNTFWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDENEGEGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRLIPYIFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLPSDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEKESAHPGGENENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTTWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1196 2.2.26 [Sep-21-2011]
Q8IV36788 Protein HID1 OS=Homo sapi yes N/A 0.338 0.513 0.578 1e-153
Q8R1F6788 Protein HID1 OS=Mus muscu yes N/A 0.338 0.513 0.569 1e-151
Q54JJ6905 Protein HID1 OS=Dictyoste yes N/A 0.352 0.466 0.273 8e-51
Q9P7M6797 Hid-1 family protein P27G yes N/A 0.158 0.238 0.290 2e-14
O13776925 Hid-1 family protein C17A no N/A 0.239 0.310 0.222 4e-10
>sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1 Back     alignment and function desciption
 Score =  542 bits (1397), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 297/513 (57%), Positives = 337/513 (65%), Gaps = 108/513 (21%)

Query: 684  KFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 743
            KFL++VLKSSDVLDILVPIL+ LND+RADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY
Sbjct: 384  KFLFFVLKSSDVLDILVPILFFLNDARADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 443

Query: 744  SAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVAS 803
            S  VPMDIPVFTGTHADLL++VFHK+ITSGH RLQPLFDCL TI+VNVSPYLK+LSMV +
Sbjct: 444  SIRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPYLKSLSMVTA 503

Query: 804  TKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLH 863
             KLLHLLEAF++  FL++   NHHLVFFLLE+FNNIIQYQFD                  
Sbjct: 504  NKLLHLLEAFSTTWFLFSAAQNHHLVFFLLEVFNNIIQYQFD------------------ 545

Query: 864  LLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLP 923
                         G +N                        LVY IIRKR IF+ L+NLP
Sbjct: 546  -------------GNSN------------------------LVYAIIRKRSIFHQLANLP 568

Query: 924  SDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNA 983
            +D  +IH+AL     R+R +P        P S +   E +  SMEGS+PA PAEPGTL  
Sbjct: 569  TDPPTIHKALQ----RRRRTP-------EPLSRTGSQEGT--SMEGSRPAAPAEPGTLKT 615

Query: 984  TLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIY 1043
            +L  TPG DK  +   +       E G   +  P                          
Sbjct: 616  SLVATPGIDKLTEKSQVS------EDGTLRSLEP-------------------------- 643

Query: 1044 QPPQGIEKMTEKESAHPGGENENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQ 1103
            +P Q +E  +  +        E    +PS+ S+  Q      W+PTPEWV SWK KLPLQ
Sbjct: 644  EPQQSLEDGSPAKGEPSQAWREQ--RRPSTSSASGQ------WSPTPEWVLSWKSKLPLQ 695

Query: 1104 TIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTT 1163
            TIMRLLQVLVPQVEKICIDKGLTDESEIL+FLQHGTLVGLLPVPHPILIRKYQANSGT  
Sbjct: 696  TIMRLLQVLVPQVEKICIDKGLTDESEILRFLQHGTLVGLLPVPHPILIRKYQANSGTAM 755

Query: 1164 WFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV 1196
            WFRTYMWGVIYLRNVDPP+WYDTDVKLFEIQRV
Sbjct: 756  WFRTYMWGVIYLRNVDPPVWYDTDVKLFEIQRV 788
May play an important role in the development of cancers in a broad range of tissues.
Homo sapiens (taxid: 9606)
>sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1 Back     alignment and function description
>sp|Q54JJ6|HID1_DICDI Protein HID1 OS=Dictyostelium discoideum GN=hid1 PE=3 SV=1 Back     alignment and function description
>sp|Q9P7M6|YIOC_SCHPO Hid-1 family protein P27G11.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP27G11.12 PE=3 SV=1 Back     alignment and function description
>sp|O13776|YE9G_SCHPO Hid-1 family protein C17A5.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A5.16 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1196
350398971778 PREDICTED: UPF0663 transmembrane protein 0.347 0.534 0.602 1e-155
157119862843 hypothetical protein AaeL_AAEL001507 [Ae 0.360 0.511 0.572 1e-155
193608369761 PREDICTED: UPF0663 transmembrane protein 0.340 0.534 0.580 1e-155
291241639822 PREDICTED: CG8841-like [Saccoglossus kow 0.353 0.514 0.580 1e-154
156548268777 PREDICTED: UPF0663 transmembrane protein 0.343 0.528 0.593 1e-154
116004059787 UPF0663 transmembrane protein C17orf28 h 0.336 0.512 0.580 1e-153
350590149788 PREDICTED: UPF0663 transmembrane protein 0.338 0.513 0.584 1e-153
340712094778 PREDICTED: UPF0663 transmembrane protein 0.347 0.534 0.598 1e-153
395533053781 PREDICTED: protein hid-1 homolog [Sarcop 0.340 0.521 0.582 1e-153
350590151587 PREDICTED: UPF0663 transmembrane protein 0.338 0.689 0.584 1e-153
>gi|350398971|ref|XP_003485368.1| PREDICTED: UPF0663 transmembrane protein C17orf28-like [Bombus impatiens] Back     alignment and taxonomy information
 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 309/513 (60%), Positives = 342/513 (66%), Gaps = 97/513 (18%)

Query: 684  KFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 743
            KFLYYVLKSSDVL++LVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY
Sbjct: 363  KFLYYVLKSSDVLEVLVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 422

Query: 744  SAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVAS 803
            +A VPMDIPVFTGTHADLL+ VFHK+IT+GH RLQPLFDCL TILVNVSPYLKTLSMVAS
Sbjct: 423  TATVPMDIPVFTGTHADLLVTVFHKIITTGHQRLQPLFDCLLTILVNVSPYLKTLSMVAS 482

Query: 804  TKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLH 863
            TKLLHLLEAF++P FL++  TNHHLVFFLLEIFNNIIQYQFD                  
Sbjct: 483  TKLLHLLEAFSTPWFLFSAPTNHHLVFFLLEIFNNIIQYQFD------------------ 524

Query: 864  LLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYALSNLP 923
                         G +N                        LVYTIIRKRQ+F+AL+NLP
Sbjct: 525  -------------GNSN------------------------LVYTIIRKRQVFHALANLP 547

Query: 924  SDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPGTLNA 983
            SD  +I ++LS     KR     P  TS  +   A       +MEGS PA PAEPGTL A
Sbjct: 548  SDCNTIAKSLS-----KRQRRHVPASTSNENVNEA-------AMEGSHPAQPAEPGTLKA 595

Query: 984  TLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIY 1043
            TL +TPG +K  + +S           VG         A E         L+   S++  
Sbjct: 596  TLLETPGIEKMTEKESAHPLSPSVNIDVGKPNHQNNVNAAED--------LMNSTSKSSV 647

Query: 1044 QPPQGIEKMTEKESAHPGGENENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQ 1103
             P  GI                  VA+  + S+ I       W P+ EWV  WK KLPLQ
Sbjct: 648  IPKGGIR-----------------VAEHMNSSNNINQ-----WVPSSEWVYQWKSKLPLQ 685

Query: 1104 TIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANSGTTT 1163
            TIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIR+YQAN+GTT 
Sbjct: 686  TIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRRYQANAGTTA 745

Query: 1164 WFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV 1196
            WFRTYMWGVIYLRNV+PPIWYDTDVKLFEIQRV
Sbjct: 746  WFRTYMWGVIYLRNVEPPIWYDTDVKLFEIQRV 778

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157119862|ref|XP_001659543.1| hypothetical protein AaeL_AAEL001507 [Aedes aegypti] gi|108883127|gb|EAT47352.1| AAEL001507-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|193608369|ref|XP_001950927.1| PREDICTED: UPF0663 transmembrane protein C17orf28 homolog [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|291241639|ref|XP_002740718.1| PREDICTED: CG8841-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|156548268|ref|XP_001601368.1| PREDICTED: UPF0663 transmembrane protein C17orf28 homolog isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|116004059|ref|NP_001070392.1| UPF0663 transmembrane protein C17orf28 homolog [Bos taurus] gi|115305130|gb|AAI23460.1| Chromosome 17 open reading frame 28 ortholog [Bos taurus] gi|296475981|tpg|DAA18096.1| TPA: hypothetical protein LOC540436 [Bos taurus] Back     alignment and taxonomy information
>gi|350590149|ref|XP_003482999.1| PREDICTED: UPF0663 transmembrane protein C17orf28-like isoform 1 [Sus scrofa] Back     alignment and taxonomy information
>gi|340712094|ref|XP_003394599.1| PREDICTED: UPF0663 transmembrane protein C17orf28-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|395533053|ref|XP_003768578.1| PREDICTED: protein hid-1 homolog [Sarcophilus harrisii] Back     alignment and taxonomy information
>gi|350590151|ref|XP_003483000.1| PREDICTED: UPF0663 transmembrane protein C17orf28-like isoform 2 [Sus scrofa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1196
UNIPROTKB|F1RVV6796 C17orf28 "Uncharacterized prot 0.151 0.227 0.769 1.1e-232
UNIPROTKB|E1C0V2796 C18H17orf28 "Uncharacterized p 0.151 0.227 0.774 5.1e-232
UNIPROTKB|Q8IV36788 HID1 "Protein HID1" [Homo sapi 0.151 0.229 0.758 2.5e-229
MGI|MGI:2445087788 Hid1 "HID1 domain containing" 0.151 0.229 0.763 4.4e-229
UNIPROTKB|F6QK33787 C19H17orf28 "Uncharacterized p 0.151 0.229 0.763 5.5e-229
UNIPROTKB|D4A0C3788 RGD1311422 "Protein RGD1311422 0.151 0.229 0.763 5.8e-229
UNIPROTKB|F1PV04782 C17orf28 "Uncharacterized prot 0.151 0.231 0.769 1.6e-222
ZFIN|ZDB-GENE-040718-239804 hid1b "HID1 domain containing 0.151 0.225 0.741 3.2e-221
WB|WBGene00001844729 hid-1 [Caenorhabditis elegans 0.135 0.222 0.691 4.7e-175
DICTYBASE|DDB_G0288009905 DDB_G0288009 "UPF0663 family p 0.133 0.176 0.378 5.4e-54
UNIPROTKB|F1RVV6 C17orf28 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
 Score = 723 (259.6 bits), Expect = 1.1e-232, Sum P(7) = 1.1e-232
 Identities = 140/182 (76%), Positives = 159/182 (87%)

Query:   684 KFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 743
             KFL++VLKSSDVLDILVPILY LND+RADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY
Sbjct:   384 KFLFFVLKSSDVLDILVPILYFLNDARADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 443

Query:   744 SAAVPMDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLSMVAS 803
             S  VPMDIPVFTGTHADLL++VFHK+ITSGH RLQPLFDCL TI+VNVSPYLK+LSMVA+
Sbjct:   444 SVRVPMDIPVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPYLKSLSMVAA 503

Query:   804 TKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLH 863
              KLLHLLEAF++  FL++   NHHLVFFLLE+FNNIIQYQFD +  L   +++    + H
Sbjct:   504 NKLLHLLEAFSTTWFLFSAAQNHHLVFFLLEVFNNIIQYQFDGNSNL-VYAIIRKRSVFH 562

Query:   864 LL 865
              L
Sbjct:   563 QL 564
GO:0031001 "response to brefeldin A" evidence=IEA
GO:0006886 "intracellular protein transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IEA
GO:0005797 "Golgi medial cisterna" evidence=IEA
GO:0000139 "Golgi membrane" evidence=IEA
GO:0000138 "Golgi trans cisterna" evidence=IEA
UNIPROTKB|E1C0V2 C18H17orf28 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IV36 HID1 "Protein HID1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2445087 Hid1 "HID1 domain containing" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F6QK33 C19H17orf28 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|D4A0C3 RGD1311422 "Protein RGD1311422" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PV04 C17orf28 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040718-239 hid1b "HID1 domain containing b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00001844 hid-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0288009 DDB_G0288009 "UPF0663 family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8R1F6HID1_MOUSENo assigned EC number0.56920.33860.5139yesN/A
Q8IV36HID1_HUMANNo assigned EC number0.57890.33860.5139yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1196
pfam12722813 pfam12722, Hid1, High-temperature-induced dauer-fo 1e-129
pfam12722813 pfam12722, Hid1, High-temperature-induced dauer-fo 2e-66
pfam09742659 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndr 5e-62
pfam09742659 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndr 1e-60
pfam12722813 pfam12722, Hid1, High-temperature-induced dauer-fo 3e-58
pfam09742659 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndr 6e-20
pfam12722 813 pfam12722, Hid1, High-temperature-induced dauer-fo 1e-13
pfam09742 659 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndr 5e-10
>gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein Back     alignment and domain information 
 Score =  414 bits (1066), Expect = e-129
 Identities = 201/530 (37%), Positives = 254/530 (47%), Gaps = 124/530 (23%)

Query: 684  KFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPY 743
            +F  YV      LD+LV ILY+L   R D S+ GL+ + VFILL LS E+NFGV+LNKP+
Sbjct: 388  RFRNYVADK-RALDLLVFILYYLFYYRNDPSKKGLVPLCVFILLYLSSEKNFGVKLNKPF 446

Query: 744  SA--AVP--MDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPYLKTLS 799
            +A   +P    +PVFTGT+AD L+I    +IT+G  RLQ LF CL               
Sbjct: 447  NANNKLPNFFKLPVFTGTYADFLIIQICNIITTGKKRLQQLFPCL--------------- 491

Query: 800  MVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVAST 859
                                             LEI  N+        PYL  LS  AS+
Sbjct: 492  ---------------------------------LEILYNLS-------PYLGGLSYNASS 511

Query: 860  KLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRQIFYAL 919
            KLLHL   F+SP FL +   NH L+  LLE FNNIIQYQFDGNSNL+Y I+R R++F  L
Sbjct: 512  KLLHLFSKFSSPWFLLSNPFNHDLLALLLEAFNNIIQYQFDGNSNLLYAILRHRKVFDQL 571

Query: 920  SNLPSDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALPAEPG 979
             NL  DS+      S                    S S  +  +  +   S+    +E  
Sbjct: 572  RNLILDSSQEEDERS------------------NQSASGSLSDNPSNDNDSRSPSLSEVP 613

Query: 980  TLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFS 1039
              N +LA T   D A    S               TS A  P   ++             
Sbjct: 614  EENKSLAITDDFDPASRENS---------------TSEAAAPPSVNS------------- 645

Query: 1040 ETIYQPPQGIEKMTEKESA-HPGGENENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKD 1098
                Q     EK   K  A        N   +P   S  +       + PT +WV+SWK 
Sbjct: 646  -VPLQLQGPSEKDRGKNPAGSLAFSRLNSATRPKWPS-GLSSKSKEKFPPTSDWVESWKG 703

Query: 1099 KLPLQTIMRLLQVLVPQVEKICIDKGLTDESEIL-----KFLQHGTLVGLLP-------V 1146
            KLPLQTI+RL++VL+PQV KICI KGLT ESE+L     KFL  GT+VGLLP       V
Sbjct: 704  KLPLQTILRLIKVLLPQVPKICIIKGLTYESELLVLNIEKFLFDGTIVGLLPQLLYDLSV 763

Query: 1147 PHPILIRKYQANSGTTTWFRTYMWGVIYLRNV---DPPIWYDTDVKLFEI 1193
            PHPI IRK+Q N+ +  W+R+ +WGVI+ RN     P IW  TDVKLF+I
Sbjct: 764  PHPIKIRKFQWNALSLGWYRSLLWGVIFNRNSGLGTPNIWNGTDVKLFKI 813

Hid1 (high-temperature-induced dauer-formation protein 1) represents proteins of approximately 800 residues long and is conserved from fungi to humans. It contains up to seven potential transmembrane domains separated by regions of low complexity. Functionally it might be involved in vesicle secretion or be an inter-cellular signalling protein or be a novel insulin receptor. Length = 813
>gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein Back     alignment and domain information
>gnl|CDD|220375 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndrome protein Back     alignment and domain information
>gnl|CDD|220375 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndrome protein Back     alignment and domain information
>gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein Back     alignment and domain information
>gnl|CDD|220375 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndrome protein Back     alignment and domain information
>gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein Back     alignment and domain information
>gnl|CDD|220375 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndrome protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1196
PF12722895 Hid1: High-temperature-induced dauer-formation pro 100.0
KOG2226|consensus786 100.0
PF09742678 Dymeclin: Dyggve-Melchior-Clausen syndrome protein 100.0
KOG2226|consensus786 100.0
PF12722895 Hid1: High-temperature-induced dauer-formation pro 100.0
PF09742678 Dymeclin: Dyggve-Melchior-Clausen syndrome protein 99.78
KOG2225|consensus695 99.22
>PF12722 Hid1: High-temperature-induced dauer-formation protein Back     alignment and domain information 
Probab=100.00  E-value=7.1e-163  Score=1500.16  Aligned_cols=769  Identities=46%  Similarity=0.769  Sum_probs=622.3

Q ss_pred             CCCchhhhHHHHHHHHhhcCCccCCCCChh-hHHhhccCCCCChhhhcccCChHHHHHHHhhCcchHHHHHHHHHHHHHH
Q psy8927           1 MGNSDTKLNFRQAVIQLTSKTQPIDASDNT-FWNQFWSENVTNAQDIFTLIPSAEIRALREEAPSNLATLCYKAVEKLVN   79 (1196)
Q Consensus         1 MG~sdsKL~Fr~~v~~L~~~~~~I~~~Dd~-fW~~fW~~~p~sa~DVF~Lisp~dIR~~Rd~~p~NlaTLi~~~v~rL~~   79 (1196)
                      ||++||||+||++|+||++++++++|.||. ||++||+ .|++++|||+||+|+|||++|+++|+|++|||+++++||+.
T Consensus         1 MG~sdsKl~fr~~i~~L~~~~~~~~~~dd~~fw~~fw~-~~~s~~Dvf~Li~~~diR~ir~~~~~Nl~tLi~~~~~~l~~   79 (895)
T PF12722_consen    1 MGNSDSKLNFRKHIFKLAQERIIVDPDDDAFFWDQFWE-LPTSAEDVFSLISPADIRRIRDENPENLATLIRKLVERLVQ   79 (895)
T ss_pred             CCchhhHHHHHHHHHHHcCCCcCCCCcccHHHHHHHHc-CCCCHHHHHhcCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988777889998 9999997 99999999999999999999999999999999999999999


Q ss_pred             hhcCcCC--CccccchhhhhHHhhhhccccccc---cccccc-cccccccCCCCC---------CCC-CCCCCCCcccCC
Q psy8927          80 AVDSSCR--MAHEQQAVLNCTRLLTRLIPYIFE---DMDWRG-FFWSSLPSKSTS---------DEN-EGEGPDKAEDLQ  143 (1196)
Q Consensus        80 ~~~~~~~--~~~~~~~~LNCiRlLTRiLP~ifE---~~~w~~-fFWs~~~~~~~~---------~~~-~~~~~~~~e~l~  143 (1196)
                      +++++++  +..+.++||||||+||||||||||   +++|++ |||++.+++...         ++. ....++....|+
T Consensus        80 ~~~~~~~~~~~~~~~~~LNciRiLTRilP~i~E~~~~~~~~~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLg  159 (895)
T PF12722_consen   80 LANSPSFPSTPAPKQELLNCIRILTRILPFIFEADYDEEWEEEFFWSSRPKPSRGAQSASEVLFDEASSEEDDEQSPPLG  159 (895)
T ss_pred             HhcCccccccchhhhHHHHHHHHHHHhhhHhhcccccccchhccccCCCCccccccccccccccccccccccccCCCCHH
Confidence            9999988  555667999999999999999999   789996 999998775211         000 000111111111


Q ss_pred             -----------------------Cccccc-ccccCCcccCCCCCC-CchhhhhhHHHHHHHHHhhcccccCCCCCCCCcc
Q psy8927         144 -----------------------SIDSCE-YIWERGVGFATSPAR-CPAHESARTELLKLLLTCFSETIYQPPQDASDNT  198 (1196)
Q Consensus       144 -----------------------~ids~~-~IWe~GVG~~~~~~~-n~~~dsNR~EVLrLLLTl~Se~mY~~p~~~~D~~  198 (1196)
                                             +.+.|. .|||+|||++.+++. +++||+||+|||||||||||++||+||......+
T Consensus       160 ~~Ll~al~dLLF~~gFTv~~~~~~~~~~~~~iWe~GIg~~~~~~~~~~~~dsNR~EvLrLLLtl~S~~lY~~~~~~~~~~  239 (895)
T PF12722_consen  160 ERLLDALVDLLFCPGFTVPSSSSSPDKVSYSIWEPGIGTNTSPPSPNKEHDSNRTEVLRLLLTLFSEPLYQPPSLSSTGN  239 (895)
T ss_pred             HHHHHHHHHHhCCCCCcCCCccCCCCccceeeccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhchhhcCCCccCCCCC
Confidence                                   122334 499999999998886 9999999999999999999999999998335678


Q ss_pred             chhhhccc--cccccccccccCCHHHHHHHHhhCchhHHHHHHHHHHHHHHhcCCcccchhhhhhhhhHHhhhc---ccc
Q psy8927         199 FWNQFWSE--NVTNAQDIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLT---RLI  273 (1196)
Q Consensus       199 fW~qfW~e--~~~sa~DVFsLi~~~dIr~lrd~~psNLaTL~~~~~~rL~~~~dp~~~~~~~~~~vLNCiRlLT---RvL  273 (1196)
                      .|..|++.  +...+..++|               |.|||+|         .++|                 .+   +.+
T Consensus       240 ~~l~~l~s~~~~~~~l~L~~---------------SLlNt~~---------~y~p-----------------~~~~~~~l  278 (895)
T PF12722_consen  240 KFLTYLVSCTPRQLVLTLLC---------------SLLNTVC---------RYDP-----------------SGNEEWGL  278 (895)
T ss_pred             eeeeeeccCcchhhhHHHHH---------------HHHHHHH---------hcCC-----------------CCcccccc
Confidence            99999983  3233677777               9999999         8998                 45   889


Q ss_pred             ccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHhhhcCCCCccccCCcchhhhhhhhcCCCCc
Q psy8927         274 PYIFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKCTCQVFLMLGTQDNL  353 (1196)
Q Consensus       274 PyifE~~~w~~fFWs~~p~~~~~d~~E~~~~~~~e~~~~~pLae~Ll~aL~DLLFcpgFTv~~~~c~~q~l~~~l~~~~~  353 (1196)
                      ||.+-           .    +.|.++             +|++.+                     .|+|+++++++.+
T Consensus       279 pY~~~-----------~----~~d~r~-------------~lV~~s---------------------lQlL~vlL~y~~~  309 (895)
T PF12722_consen  279 PYNHL-----------V----FSDSRE-------------PLVTYS---------------------LQLLNVLLDYPPP  309 (895)
T ss_pred             ccccc-----------c----ccCccc-------------HHHHHH---------------------HHHHHHheeCCCC
Confidence            99554           1    344444             899999                     9999999998765


Q ss_pred             cccccccccccchhhHhhhcccccccCCCCcccccccccCCCCCchhhhhhhcccCccchhhhHHHHHHhhccccccccc
Q psy8927         354 FINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGLALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYL  433 (1196)
Q Consensus       354 ~~~~~~~~hRtEdLkllLTgfSe~~~~p~~~~~~~~~~~~~~~~N~~~~~l~~lhr~~df~fiL~g~trLLn~pL~~s~l  433 (1196)
                      .......                 ...++.        .....+|.||+|++|+||++||+||++||+|+|++|+..+--
T Consensus       310 ~~~~~~~-----------------~~~~~~--------~~~~~~N~~r~yl~~lhr~~D~~fi~~gl~~iL~~pl~~~~~  364 (895)
T PF12722_consen  310 SQTNSSF-----------------SSETNL--------TSSKPKNLFRNYLSKLHREEDFQFILDGLTRILNNPLQSAIE  364 (895)
T ss_pred             CCCcccc-----------------ccccCc--------CCCCcchHHHHHHhccCcHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            4332100                 000000        014689999999999999999999999999999999863211


Q ss_pred             CCCcchhhhhhhhhhhhhhhcccccchhhhccchhcccCcc-cccccCCCccccchhhHHHHHHHHhhccchhhhhhhhc
Q psy8927         434 PNSTKKIEFHQELLVLFWKMCDYNKTLTQLAGFSRLLNNPL-LQTYLPNSTKKIEFHQELLVLFWKMCDYNKKFLYYVLK  512 (1196)
Q Consensus       434 p~~~~~~~~~q~liv~l~~~~~~~~~~~~l~g~~rll~npl-~qtYLP~S~Kki~~hqElLvLfWk~~d~n~~f~~~vl~  512 (1196)
                      -++                                   |+. .++|+|+++|++.||||++||||++|||||||+.||++
T Consensus       365 ~es-----------------------------------~~f~~~~~lp~s~~~~~~~~e~l~l~W~l~~~Nk~F~~~v~~  409 (895)
T PF12722_consen  365 QES-----------------------------------NPFSSSSYLPGSQKPSPWAQELLMLFWELIQCNKRFRNYVLD  409 (895)
T ss_pred             ccc-----------------------------------cccccccccccccccchHHHHHHHHHHHHHhhCHHHHHHHhh
Confidence            111                                   122 47999999999999999999999999999999999999


Q ss_pred             cCccchhhhhhhhhcccccccccccccchhhhHHHHHHHHHHhhhccccccchhhhhhhccccccccccccccchhhhhH
Q psy8927         513 SSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFI  592 (1196)
Q Consensus       513 s~~~~d~~v~~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~f~  592 (1196)
                       .+++|++|++|||++++|+||                                                          
T Consensus       410 -~~~~~llv~llyy~~~~~~~~----------------------------------------------------------  430 (895)
T PF12722_consen  410 -KRALDLLVPLLYYLLEYRDDP----------------------------------------------------------  430 (895)
T ss_pred             -ccHHHHHHHHHHHHHHhcCCh----------------------------------------------------------
Confidence             999999999999999999999                                                          


Q ss_pred             hhhhccccccccccCCCCCcccCCcccccccccccccccccccchhhhhHhhhhccccccccccCCCCCCCCCCCccccc
Q psy8927         593 LLLLSGERNFGVRLNKPYSAAVPMDIPVFTGLVLRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSAAVPMDIPVFT  672 (1196)
Q Consensus       593 ~~~~s~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  672 (1196)
                                                                                                      
T Consensus       431 --------------------------------------------------------------------------------  430 (895)
T PF12722_consen  431 --------------------------------------------------------------------------------  430 (895)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccchhhhhhhhHHHHHhhccccchhhhHhHHhhcccccccccccchhhhHHHHHHhhccccccccccCcCccC----CCC
Q psy8927         673 GNSINILMEDLKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSA----AVP  748 (1196)
Q Consensus       673 ~~~~~~~~~~~~f~~~~~~~~~~~~~l~~~l~~~~~~r~~~sk~GLvricvFILq~LS~ErnFGv~LNKpf~~----~~p  748 (1196)
                                                               +++|+||||+||||+||+||+||++|||||+.    ++|
T Consensus       431 -----------------------------------------~~~glv~i~~fill~LS~e~~f~~~Ln~p~~~~~~~~lP  469 (895)
T PF12722_consen  431 -----------------------------------------SKQGLVRICSFILLYLSSERNFGVKLNKPFSAYYQNSLP  469 (895)
T ss_pred             -----------------------------------------hhcccHHHHHHHHHHHccchHHHHHhccccchhhcccCC
Confidence                                                     77799999999999999999999999999999    788


Q ss_pred             --cccCCccccccchhhhhhhhhhccCcCCccccchhhhHhhhcchHh---------hhhccHHHHHHHHHHHHhhcCcc
Q psy8927         749 --MDIPVFTGTHADLLMIVFHKVITSGHNRLQPLFDCLFTILVNVSPY---------LKTLSMVASTKLLHLLEAFASPA  817 (1196)
Q Consensus       749 --i~ip~f~GTyADfLIisi~~LItt~~~rL~~ly~~LLtIL~NiSPY---------~k~LS~~assKLl~Lf~sfSsP~  817 (1196)
                        +|||+|+||||||||++||+||+++++++.++||||++||+||+||         +|+||++||+||+|||++||+|+
T Consensus       470 ~~~~i~~~~gT~~DflI~~i~~ii~~~~~~~~~l~~~l~~il~Ni~p~~~s~~~~~~~~~LS~~as~~L~~L~~~~S~p~  549 (895)
T PF12722_consen  470 NSFKIPVFPGTYADFLIISICNIITTSHGRLSSLYPCLLEILYNISPYTLSSKKSSNLKGLSYVASSKLLQLFSKFSSPS  549 (895)
T ss_pred             CccccCCCCCcHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHhcccccccchhhhhhcCcCHHHHHHHHHHHHHhcChH
Confidence              9999999999999999999999999999999999999999999999         99999999999999999999999


Q ss_pred             ccccCCCCchhHHHHHHHhhhhhcccccCchhhhhhhhHHHHHHHHHHhhhcCCcccccCCCChhhHHHHHHHHHHHhhh
Q psy8927         818 FLYTGETNHHLVFFLLEIFNNIIQYQFDVSPYLKTLSMVASTKLLHLLEAFASPAFLYTGETNHHLVFFLLEIFNNIIQY  897 (1196)
Q Consensus       818 FL~~~~~n~~ll~~ll~~~~~ii~~~~~~~p~~~~ls~~~~~~l~~l~~~~ssp~fllane~Nh~LL~~LLE~fNnIIqy  897 (1196)
                      ||                                                       |++++||+||++|||+|||||||
T Consensus       550 fL-------------------------------------------------------~~~~~n~~ll~~LL~a~n~~i~~  574 (895)
T PF12722_consen  550 FL-------------------------------------------------------LSNEFNHDLLALLLEAFNNIIQY  574 (895)
T ss_pred             HH-------------------------------------------------------hcCCchHHHHHHHHHHHHHHHHh
Confidence            99                                                       99999999999999999999999


Q ss_pred             ccCCCcchhhHhhhhccccccccCC--CCChHHHHHhhcccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy8927         898 QFDGNSNLVYTIIRKRQIFYALSNL--PSDSASIHRALSVSGGRKRSSPLPPLLTSAPSSPSAGVEPSSPSMEGSKPALP  975 (1196)
Q Consensus       898 Qf~~N~nLVYaIiR~r~~F~~L~~l--~s~~~eI~r~~~~~~~rr~~~~~~~~~~s~~ss~s~~~~~~~~s~~~s~~~~~  975 (1196)
                      ||++|+||||+|+|+|++|++|+++  +.++++++++.+    +|++...........++.+......+..++++....+
T Consensus       575 ~~~~n~~Lvyailr~~~~f~~L~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  650 (895)
T PF12722_consen  575 QFSGNPNLVYAILRNRKVFEQLRNFTLSSGQEEIERQNR----KRKDEAESDPISNSSSSSSSQSSRSPSSNNDSRSPSP  650 (895)
T ss_pred             ccccchHHHHHHHhhHHHHHHHHHhhhhhhHHHHhhccc----ccccccccccccccccccccccCCCCccccccCCCCc
Confidence            9999999999999999999999997  677777777655    3222111110000011111111222222334433334


Q ss_pred             CCCCccccccCCCCCCCCcccccccCccccccccCCCCCCCCCCCCCCcchhHHHHHhhhcccccccCCCCccccccccc
Q psy8927         976 AEPGTLNATLADTPGPDKAEDLQSIDSCEYIWERGVGFATSPARCPAHESARTELLKLLLTCFSETIYQPPQGIEKMTEK 1055 (1196)
Q Consensus       976 ~e~~~~~~~l~~~~g~d~~~e~~~~~~~~~~~~~~~~~~~sp~~~~s~~s~~~~~~~~~~~~~se~~~s~p~~~~~m~e~ 1055 (1196)
                      .++++..++++.++++++++++++.++          .+++++                       ..++|.+.++|+++
T Consensus       651 ~~~~~~~~s~~~~~~~d~~s~~~~~~~----------~~s~~~-----------------------~~s~~~~~~~~se~  697 (895)
T PF12722_consen  651 SEPPEENASFAIGPDDDDDSEENSPSP----------SQSSPS-----------------------SSSVPKQLQGMSEK  697 (895)
T ss_pred             cCCCCCCcccccCCCcCccccccCCCC----------Cccccc-----------------------ccccccccCCcCcc
Confidence            444455555665666665554332110          011100                       00344566677777


Q ss_pred             ccC-CCCCCC----cccccCCCCCCCCcccCCCCccccChhHHHhhhcCCChHHHHHHHHHhhhhhHHHhhhcCCCCHHH
Q psy8927        1056 ESA-HPGGEN----ENVVAKPSSISSPIQHSHPRVWTPTPEWVKSWKDKLPLQTIMRLLQVLVPQVEKICIDKGLTDESE 1130 (1196)
Q Consensus      1056 ~~~-~~~~~~----~~s~~~~~~~s~~~~~~~~~~F~PT~eWv~SW~~~LPL~TIl~lIq~L~PqVe~~c~~kg~tde~e 1130 (1196)
                      +++ +|.+..    +++.++++..+ +....++++|+||++|++||+++|||||||++||+|+|||+++|.++|.+++++
T Consensus       698 a~~k~~~~~~~~s~~~~~~r~~~p~-g~s~~~~~kf~Pt~~Wv~SW~~~LpL~tIL~lIq~L~pqv~~i~~~~~~t~~~~  776 (895)
T PF12722_consen  698 ARGKMPAGSPEFSRQNSSTRPSWPS-GMSFKSKGKFVPTQEWVESWKGKLPLQTILRLIQVLLPQVPKICIDKGLTDESE  776 (895)
T ss_pred             ccccCCCCCCcccccccccccccCc-CcccccccCcCCCchHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence            766 555542    23333333222 233477899999999999999999999999999999999999999999999999


Q ss_pred             HH-----HHhhccccccccC-------CCCCccccccccCcchhhHHHHHhHHhhhhcCC--------------------
Q psy8927        1131 IL-----KFLQHGTLVGLLP-------VPHPILIRKYQANSGTTTWFRTYMWGVIYLRNV-------------------- 1178 (1196)
Q Consensus      1131 il-----~fL~~~tlvgllP-------vP~Pi~iRkfewn~~t~~Wf~SllWG~Ifl~~~-------------------- 1178 (1196)
                      |+     +|+++++++|++|       +||||++|+||||+++++||+|||||+||.++|                    
T Consensus       777 il~~~~~~~l~~~tl~~lLp~~~~~~~~p~Pi~ir~f~wn~~sl~Wy~SllWg~If~s~~~v~~~s~~~~~~~~~~s~s~  856 (895)
T PF12722_consen  777 ILVQSIFKFLFHGTLVGLLPIYNYDLPEPHPIRIRKFQWNPLSLGWYESLLWGVIFNSNSQVSSASGSNNNIMKNNSSSN  856 (895)
T ss_pred             HHHhhhhhhhhHHHHHhhccccccccCCCCCceeecCCCCHHHHHHHHHHHHHHHhcccchhhccccccccccccccccc
Confidence            98     9999999999999       999999999999999999999999999999999                    


Q ss_pred             ------------------------CCCCccCCceeEEEE
Q psy8927        1179 ------------------------DPPIWYDTDVKLFEI 1193 (1196)
Q Consensus      1179 ------------------------~p~iW~~T~VkLF~v 1193 (1196)
                                              +||||+||+||||+|
T Consensus       857 ~~~S~f~~sW~~f~~~~~~~v~l~~~niW~gT~IkLF~V  895 (895)
T PF12722_consen  857 SSFSFFKFSWSGFSQNSSTSVDLGTPNIWNGTDIKLFKV  895 (895)
T ss_pred             cccceeeccccCCcccccccccCCCCCcCCCceeeeeeC
Confidence                                    899999999999997

>KOG2226|consensus Back     alignment and domain information
>PF09742 Dymeclin: Dyggve-Melchior-Clausen syndrome protein; InterPro: IPR019142 Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs Back     alignment and domain information
>KOG2226|consensus Back     alignment and domain information
>PF12722 Hid1: High-temperature-induced dauer-formation protein Back     alignment and domain information
>PF09742 Dymeclin: Dyggve-Melchior-Clausen syndrome protein; InterPro: IPR019142 Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs Back     alignment and domain information
>KOG2225|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1196
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 67.2 bits (163), Expect = 3e-11
 Identities = 85/589 (14%), Positives = 161/589 (27%), Gaps = 216/589 (36%)

Query: 72  KAVEKLVNAVDSSCRMAH--EQQAVLNCTRLL--------TRLIPYIFEDMDWR--GFFW 119
           K V+ +  ++ S   + H    +  ++ T  L          ++    E++      F  
Sbjct: 36  KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM 95

Query: 120 SSLPSKSTSDENEGEGPDKAEDLQSIDSCEYIWERGVGFATSPA-------RCPAHESAR 172
           S +       + E   P       S+ +  YI +R   +  +         R   +   R
Sbjct: 96  SPI-------KTEQRQP-------SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR 141

Query: 173 TELLKL--------------------LLTCFSETIYQPPQDASDNTFWNQFWSENVTNAQ 212
             LL+L                    L  C S  +    Q   D      FW  N+ N  
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV----QCKMDF---KIFWL-NLKNCN 193

Query: 213 DIFTLIPAAEIRALREEAPSNLATLCYKAVEKLVNAVDSSCRMAHEQQAVLNCTRLLTRL 272
              T++               L  L Y+      +  D S  +     ++    R L + 
Sbjct: 194 SPETVL-------------EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 273 IPY-----IFEDMDWRGFFWSSLPSKSTSDDNEGEGSTPAEDVESVPLAQSLLNAICDLL 327
            PY     +  ++       ++                               NA     
Sbjct: 241 KPYENCLLVLLNV------QNA----------------------------KAWNA----- 261

Query: 328 FCPDFTVASNKCTCQVFLMLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLYQDGNRTRGL 387
           F  +        +C++ L+  T+     ++LS               + +  D + +  L
Sbjct: 262 F--NL-------SCKI-LLT-TRFKQVTDFLSAATT-----------THISLD-HHSMTL 298

Query: 388 ALTRHLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELL 447
                      L + YL    +D   + VL        NP   + +  S +      +  
Sbjct: 299 TPDEVKS----LLLKYLDCRPQDLPRE-VLTT------NPRRLSIIAESIRDGLATWD-- 345

Query: 448 VLFWKMCDYNKTLTQLAGFSRLLNNPLLQTY------LPNSTKKIEFHQELLVLFW---- 497
              WK  + +K  T +     +L     +         P S   I     LL L W    
Sbjct: 346 --NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA-HIP--TILLSLIWFDVI 400

Query: 498 ---------KMCDY------NKKFLYYVLKSSDVLDILVPILYHLNDSRADQSRVGLMHI 542
                    K+  Y       K+          +  I + +   L +  A       +H 
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTIS------IPSIYLELKVKLENEYA-------LH- 446

Query: 543 GVFILLLKKFL--YYVLKSSDVLDILVP---------ILYHLNDSRADQ 580
                  +  +  Y + K+ D  D++ P         I +HL +    +
Sbjct: 447 -------RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00