Psyllid ID: psy8997

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MFSPFCDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIVPKSKREGRQDNATSIRLDEEEKDEKEK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEccccccHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccHHHccccEEEEccccccccEEEEEEEcccccccccccHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mfspfcdtfpifgisvprsdspahLARWEQVQREVAQsgtydlteTELVFGAKLAWRNSARCIGRIQWSKLQTLEWkrfdrgncncyglivpkskregrqdnatsirldeeekdekek
Flexible Loop (DISEMBL)
mfspfcdtFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYglivpkskregrqdnatsirldeeekdekek
Low Complexity Region (SEG)
MFSPFCDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIVPKSKREGRQDNATSIRLdeeekdekek
Disordered region (IsUnstruct)
****FCDTFPIFGISVPR****AHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIV***************************
Disordered Region (DISOPRED)
*FSPFCDTFPIFGI**************EQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIVPKSKREGRQDNAT**************
Disordered Region (DISEMBL)
MFSPFCDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIVPKSKREGRQDNATSIR***********
Disordered Region (DISPRO)
MFSPFCDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIVPKSKREGRQDNATSIRLDEEEK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFSPFCDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCNCYGLIVPKSKREGRQDNATSIRLDEEEKDEKEK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	118	2.2.26 [Sep-21-2011]
Q26240	1174	Nitric oxide synthase, sa	N/A	N/A	0.542	0.054	0.671	3e-20
O61608	1247	Nitric oxide synthase OS=	N/A	N/A	0.516	0.048	0.688	5e-20
Q27571	1349	Nitric oxide synthase OS=	no	N/A	0.542	0.047	0.593	1e-17
Q8T8C0	1209	Nitric oxide synthase OS=	N/A	N/A	0.516	0.050	0.606	5e-16
B1B557	1097	Nitric oxide synthase-lik	N/A	N/A	0.516	0.055	0.704	2e-15
Q28969	1205	Nitric oxide synthase, en	yes	N/A	0.559	0.054	0.563	3e-15
P29473	1205	Nitric oxide synthase, en	yes	N/A	0.559	0.054	0.563	3e-15
Q9TUX8	1205	Nitric oxide synthase, en	no	N/A	0.559	0.054	0.563	3e-15
P29474	1203	Nitric oxide synthase, en	no	N/A	0.550	0.054	0.571	4e-15
P70313	1202	Nitric oxide synthase, en	yes	N/A	0.550	0.054	0.571	4e-15

>sp|Q26240|NOS_RHOPR Nitric oxide synthase, salivary gland OS=Rhodnius prolixus PE=2 SV=1

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  SPAH ARW QV++EVA +GTY+LTETELV+GAKLAWRN+ RCIGRIQW+KLQ  
Sbjct: 115 SIRRLQSPAHEARWAQVEKEVAATGTYELTETELVYGAKLAWRNAPRCIGRIQWAKLQVF 174

Query: 75  EWKR 78
           + ++
Sbjct: 175 DCRQ 178

Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. The production of NO in the salivary gland is used as a vasodilator for blood sucking.
Rhodnius prolixus (taxid: 13249)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 3EC: 9

>sp|O61608|NOS_ANOST Nitric oxide synthase OS=Anopheles stephensi PE=2 SV=2

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 52/61 (85%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  SPAH +RW+QVQ+EV  +G+Y LTETEL++GAKLAWRNS+RCIGRIQWSKLQ  
Sbjct: 177 SIRRLKSPAHDSRWQQVQKEVEATGSYHLTETELIYGAKLAWRNSSRCIGRIQWSKLQVF 236

Query: 75  E 75
           +
Sbjct: 237 D 237

Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. Nitric oxide limits plasmodium development in the midgut.

Anopheles stephensi (taxid: 30069)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|Q27571|NOS_DROME Nitric oxide synthase OS=Drosophila melanogaster GN=Nos PE=2 SV=3

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 50/64 (78%)

Query: 12  FGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKL 71
           +  S+ R+ S AH  RW+QV++ +  +G Y LTETEL++GAKLAWRNS+RCIGRIQWSKL
Sbjct: 278 YFTSIKRTSSTAHETRWKQVRQSIETTGHYQLTETELIYGAKLAWRNSSRCIGRIQWSKL 337

Query: 72  QTLE 75
           Q  +
Sbjct: 338 QVFD 341

Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. Truncated isoforms (isoform 3-isoform 6) are able to form intracellular complexes with the full length protein and serve as dominant negative inhibitors of the enzyme activity.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|Q8T8C0|NOS_BOMMO Nitric oxide synthase OS=Bombyx mori GN=NOS PE=2 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 47/61 (77%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R +S AH AR ++V+RE+ + GTY L  +ELVFGAKLAWRN+ RCIGRIQW KLQ  
Sbjct: 134 SIKRENSEAHKARLDEVKRELKERGTYQLKTSELVFGAKLAWRNATRCIGRIQWKKLQIF 193

Query: 75  E 75
           +
Sbjct: 194 D 194

Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. Involved in the induction of immune gene expression.

Bombyx mori (taxid: 7091)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|B1B557|NOSL_BOMMO Nitric oxide synthase-like protein OS=Bombyx mori GN=NSL PE=2 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 52/61 (85%)

Query: 15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
          S+ R+++PAH ARW+ VQ EVA +GTY LT TELVFGAKLAWRN++RCIGRIQWSKLQ  
Sbjct: 30 SIRRANTPAHEARWKIVQEEVATTGTYQLTTTELVFGAKLAWRNASRCIGRIQWSKLQVF 89

Query: 75 E 75
          +
Sbjct: 90 D 90

Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body.

Bombyx mori (taxid: 7091)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|Q28969|NOS3_PIG Nitric oxide synthase, endothelial OS=Sus scrofa GN=NOS3 PE=1 SV=4

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 139 SIKRSGSQAHEERLQEVEAEVATTGTYHLGESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 198 ----FDARDCS 204

Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|P29473|NOS3_BOVIN Nitric oxide synthase, endothelial OS=Bos taurus GN=NOS3 PE=1 SV=3

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 139 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 198 ----FDARDCS 204

Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|Q9TUX8|NOS3_CANFA Nitric oxide synthase, endothelial OS=Canis familiaris GN=NOS3 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 139 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 198 ----FDARDCS 204

Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets.

Canis familiaris (taxid: 9615)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|P29474|NOS3_HUMAN Nitric oxide synthase, endothelial OS=Homo sapiens GN=NOS3 PE=1 SV=3

 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 5/70 (7%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 137 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 195

Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 196 ----FDARDC 201

Isoform eNOS13C: Lacks eNOS activity, dominant-negative form that may downregulate eNOS activity by forming heterodimers with isoform 1.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

>sp|P70313|NOS3_MOUSE Nitric oxide synthase, endothelial OS=Mus musculus GN=Nos3 PE=1 SV=4

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 5/70 (7%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 136 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 194

Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 195 ----FDARDC 200

Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets. May play a significant role in normal and abnormal limb development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 3

EC: .

EC: 3

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
91090738	1105	PREDICTED: similar to nitric oxide synth	0.542	0.057	0.671	8e-20
328723781	1201	PREDICTED: nitric oxide synthase, saliva	0.516	0.050	0.737	1e-19
328723779	1190	PREDICTED: nitric oxide synthase, saliva	0.516	0.051	0.737	1e-19
148367286	1133	nitric oxide synthase [Luciola lateralis	0.516	0.053	0.704	1e-19
221136346	1163	nitric oxide synthase [Gryllus bimaculat	0.516	0.052	0.737	4e-19
148367288	1136	nitric oxide synthase [Luciola cruciata]	0.542	0.056	0.671	4e-19
241238513	1110	nitric oxide synthase, putative [Ixodes	0.576	0.061	0.671	6e-19
8473626	1174	RecName: Full=Nitric oxide synthase, sal	0.542	0.054	0.671	1e-18
307206433	1126	Nitric oxide synthase, salivary gland [H	0.516	0.054	0.737	1e-18
8473620	1247	RecName: Full=Nitric oxide synthase; Sho	0.516	0.048	0.688	2e-18

>gi|91090738|ref|XP_967195.1| PREDICTED: similar to nitric oxide synthase [Tribolium castaneum] gi|270013952|gb|EFA10400.1| hypothetical protein TcasGA2_TC012639 [Tribolium castaneum]

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 12  FGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKL 71
           +  S+ R++SPAH +RWEQVQ+EVA +GTY LTETEL++GAKL WRN+ RCIGRIQWSKL
Sbjct: 41  YFTSIRRANSPAHTSRWEQVQKEVAATGTYHLTETELIYGAKLGWRNAVRCIGRIQWSKL 100

Query: 72  QTLE 75
           Q  +
Sbjct: 101 QVFD 104

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723781|ref|XP_001946209.2| PREDICTED: nitric oxide synthase, salivary gland-like isoform 1 [Acyrthosiphon pisum]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 53/61 (86%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS++PA+  RWEQVQ+EV  +GTY LTETELVFGAKLAWRNSARCIGRIQW+KLQ  
Sbjct: 117 SIKRSNTPAYETRWEQVQQEVNSTGTYQLTETELVFGAKLAWRNSARCIGRIQWAKLQMF 176

Query: 75  E 75
           +
Sbjct: 177 D 177

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723779|ref|XP_003247939.1| PREDICTED: nitric oxide synthase, salivary gland-like isoform 2 [Acyrthosiphon pisum]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 53/61 (86%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS++PA+  RWEQVQ+EV  +GTY LTETELVFGAKLAWRNSARCIGRIQW+KLQ  
Sbjct: 117 SIKRSNTPAYETRWEQVQQEVNSTGTYQLTETELVFGAKLAWRNSARCIGRIQWAKLQMF 176

Query: 75  E 75
           +
Sbjct: 177 D 177

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|148367286|dbj|BAF63160.1| nitric oxide synthase [Luciola lateralis]

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 52/61 (85%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R+ +PAHLARWEQVQ+E+ ++ TY LTETELVFGAKL WRNS RCIGRIQW+KLQ  
Sbjct: 74  SIRRAKTPAHLARWEQVQKEIKETSTYQLTETELVFGAKLGWRNSVRCIGRIQWAKLQVF 133

Query: 75  E 75
           +
Sbjct: 134 D 134

Source: Luciola lateralis

Species: Luciola lateralis

Genus: Luciola

Family: Lampyridae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221136346|dbj|BAH14964.1| nitric oxide synthase [Gryllus bimaculatus]

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 51/61 (83%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R +SPAH ARW+QVQ+EV   GTY LTETELV+GAKLAWRNS RCIGRIQWSKLQ  
Sbjct: 99  SIRRLNSPAHAARWDQVQKEVEALGTYQLTETELVYGAKLAWRNSVRCIGRIQWSKLQVF 158

Query: 75  E 75
           +
Sbjct: 159 D 159

Source: Gryllus bimaculatus

Species: Gryllus bimaculatus

Genus: Gryllus

Family: Gryllidae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|148367288|dbj|BAF63161.1| nitric oxide synthase [Luciola cruciata]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 52/64 (81%)

Query: 12  FGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKL 71
           +  S+ R+ +P+H ARWEQVQ+EV  +GTY LTETELVFGAKL WRNS RCIGRIQW+KL
Sbjct: 73  YFTSIRRAKTPSHTARWEQVQKEVKGTGTYQLTETELVFGAKLGWRNSVRCIGRIQWAKL 132

Query: 72  QTLE 75
           Q  +
Sbjct: 133 QVFD 136

Source: Luciola cruciata

Species: Luciola cruciata

Genus: Luciola

Family: Lampyridae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241238513|ref|XP_002401372.1| nitric oxide synthase, putative [Ixodes scapularis] gi|215496151|gb|EEC05792.1| nitric oxide synthase, putative [Ixodes scapularis]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 54/73 (73%), Gaps = 5/73 (6%)

Query: 12  FGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKL 71
           F  S+ R  S AH  RW +V+R+V Q GTYDLTETELVFGAKLAWRNSARCIGRIQWSKL
Sbjct: 41  FYTSIKRFHSKAHEKRWSEVERQVQQRGTYDLTETELVFGAKLAWRNSARCIGRIQWSKL 100

Query: 72  QTLEWKRFDRGNC 84
           Q      FD  +C
Sbjct: 101 QV-----FDARHC 108

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|8473626|sp|Q26240.1|NOS_RHOPR RecName: Full=Nitric oxide synthase, salivary gland; Short=NOS gi|1418270|gb|AAB03810.1| nitric oxide synthase [Rhodnius prolixus]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 54/64 (84%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  SPAH ARW QV++EVA +GTY+LTETELV+GAKLAWRN+ RCIGRIQW+KLQ  
Sbjct: 115 SIRRLQSPAHEARWAQVEKEVAATGTYELTETELVYGAKLAWRNAPRCIGRIQWAKLQVF 174

Query: 75  EWKR 78
           + ++
Sbjct: 175 DCRQ 178

Source: Rhodnius prolixus

Species: Rhodnius prolixus

Genus: Rhodnius

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206433|gb|EFN84471.1| Nitric oxide synthase, salivary gland [Harpegnathos saltator]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 50/61 (81%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R +S AH ARWE VQREV  + TY LTETELVFGAKLAWRN+ARCIGRIQWSKLQ  
Sbjct: 78  SIRRLNSDAHRARWESVQREVVTTSTYQLTETELVFGAKLAWRNAARCIGRIQWSKLQVF 137

Query: 75  E 75
           +
Sbjct: 138 D 138

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|8473620|sp|O61608.2|NOS_ANOST RecName: Full=Nitric oxide synthase; Short=NOS gi|3790537|gb|AAC68577.1| nitric oxide synthase [Anopheles stephensi]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 52/61 (85%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  SPAH +RW+QVQ+EV  +G+Y LTETEL++GAKLAWRNS+RCIGRIQWSKLQ  
Sbjct: 177 SIRRLKSPAHDSRWQQVQKEVEATGSYHLTETELIYGAKLAWRNSSRCIGRIQWSKLQVF 236

Query: 75  E 75
           +
Sbjct: 237 D 237

Source: Anopheles stephensi

Species: Anopheles stephensi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
FB|FBgn0011676	1349	Nos "Nitric oxide synthase" [D	0.516	0.045	0.622	1.8e-16
ZFIN|ZDB-GENE-001101-1	1431	nos1 "nitric oxide synthase 1	0.593	0.048	0.526	7.9e-15
UNIPROTKB|E2RHA7	1437	NOS1 "Uncharacterized protein"	0.593	0.048	0.513	1e-14
UNIPROTKB|J9P395	1465	NOS1 "Uncharacterized protein"	0.593	0.047	0.513	1e-14
UNIPROTKB|F1MY54	1205	NOS3 "Nitric oxide synthase" [	0.559	0.054	0.563	1.3e-14
UNIPROTKB|P29473	1205	NOS3 "Nitric oxide synthase, e	0.559	0.054	0.563	1.3e-14
UNIPROTKB|F1PV06	1205	NOS3 "Nitric oxide synthase" [	0.559	0.054	0.563	1.3e-14
UNIPROTKB|Q9TUX8	1205	NOS3 "Nitric oxide synthase, e	0.559	0.054	0.563	1.3e-14
UNIPROTKB|F1PV05	1211	NOS3 "Nitric oxide synthase" [	0.559	0.054	0.563	1.3e-14
UNIPROTKB|F1SSJ3	1155	NOS3 "Nitric oxide synthase" [	0.559	0.057	0.563	1.6e-14

FB|FBgn0011676 Nos "Nitric oxide synthase" [Drosophila melanogaster (taxid:7227)]

 Score = 218 (81.8 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ R+ S AH  RW+QV++ +  +G Y LTETEL++GAKLAWRNS+RCIGRIQWSKLQ  
Sbjct:   281 SIKRTSSTAHETRWKQVRQSIETTGHYQLTETELIYGAKLAWRNSSRCIGRIQWSKLQVF 340

Query:    75 E 75
             +
Sbjct:   341 D 341

GO:0004517 "nitric-oxide synthase activity" evidence=ISS;IMP;IDA;TAS

GO:0046620 "regulation of organ growth" evidence=TAS

GO:0005516 "calmodulin binding" evidence=IEA;NAS

GO:0008285 "negative regulation of cell proliferation" evidence=TAS

GO:0006809 "nitric oxide biosynthetic process" evidence=IEA;TAS

GO:0007444 "imaginal disc development" evidence=TAS

GO:0008156 "negative regulation of DNA replication" evidence=TAS

GO:0007416 "synapse assembly" evidence=TAS

GO:0020037 "heme binding" evidence=IEA;NAS

GO:0006952 "defense response" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0007399 "nervous system development" evidence=IMP

GO:0005829 "cytosol" evidence=IBA

GO:0007263 "nitric oxide mediated signal transduction" evidence=IBA

GO:0031284 "positive regulation of guanylate cyclase activity" evidence=IBA

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IBA

ZFIN|ZDB-GENE-001101-1 nos1 "nitric oxide synthase 1 (neuronal)" [Danio rerio (taxid:7955)]

 Score = 203 (76.5 bits), Expect = 7.9e-15, P = 7.9e-15
 Identities = 40/76 (52%), Positives = 54/76 (71%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ R  S AH+ R E+V++E+  SGTY L +TEL++GAK AWRN+ARC+GRIQWSKLQ  
Sbjct:   370 SIKRCCSKAHVDRLEEVKKEIETSGTYQLKDTELIYGAKHAWRNAARCVGRIQWSKLQV- 428

Query:    75 EWKRFDRGNCN-CYGL 89
                 FD  +C   +G+
Sbjct:   429 ----FDARDCTTAHGM 440

GO:0016491 "oxidoreductase activity" evidence=IEA;IBA

GO:0020037 "heme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004517 "nitric-oxide synthase activity" evidence=IEA;IBA

GO:0005506 "iron ion binding" evidence=IEA

GO:0006809 "nitric oxide biosynthetic process" evidence=IEA;IBA

GO:0010181 "FMN binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0031284 "positive regulation of guanylate cyclase activity" evidence=IBA

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IBA

GO:0045776 "negative regulation of blood pressure" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

GO:0045909 "positive regulation of vasodilation" evidence=IBA

GO:0060218 "hematopoietic stem cell differentiation" evidence=IMP

GO:0007263 "nitric oxide mediated signal transduction" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0021517 "ventral spinal cord development" evidence=IMP

GO:0048668 "collateral sprouting" evidence=IMP

UNIPROTKB|E2RHA7 NOS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 202 (76.2 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R E+V +E+  +GTY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct:   370 SIKRSGSKAHTERLEEVNKEIETTGTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 428

Query:    75 EWKRFDRGNCN-CYGL 89
                 FD  +C   +G+
Sbjct:   429 ----FDARDCTTAHGM 440

GO:0045909 "positive regulation of vasodilation" evidence=IBA

GO:0045776 "negative regulation of blood pressure" evidence=IBA

GO:0031284 "positive regulation of guanylate cyclase activity" evidence=IBA

GO:0016491 "oxidoreductase activity" evidence=IBA

GO:0007263 "nitric oxide mediated signal transduction" evidence=IBA

GO:0006936 "muscle contraction" evidence=IBA

GO:0006809 "nitric oxide biosynthetic process" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

GO:0004517 "nitric-oxide synthase activity" evidence=IBA

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IBA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0051926 "negative regulation of calcium ion transport" evidence=IEA

GO:0051612 "negative regulation of serotonin uptake" evidence=IEA

GO:0051346 "negative regulation of hydrolase activity" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0043267 "negative regulation of potassium ion transport" evidence=IEA

GO:0042738 "exogenous drug catabolic process" evidence=IEA

GO:0042383 "sarcolemma" evidence=IEA

GO:0035066 "positive regulation of histone acetylation" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0006941 "striated muscle contraction" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0002028 "regulation of sodium ion transport" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|J9P395 NOS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 202 (76.2 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 39/76 (51%), Positives = 53/76 (69%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R E+V +E+  +GTY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct:   370 SIKRSGSKAHTERLEEVNKEIETTGTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 428

Query:    75 EWKRFDRGNCN-CYGL 89
                 FD  +C   +G+
Sbjct:   429 ----FDARDCTTAHGM 440

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0006809 "nitric oxide biosynthetic process" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

GO:0004517 "nitric-oxide synthase activity" evidence=IEA

UNIPROTKB|F1MY54 NOS3 "Nitric oxide synthase" [Bos taurus (taxid:9913)]

 Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 40/71 (56%), Positives = 50/71 (70%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct:   139 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query:    75 EWKRFDRGNCN 85
                 FD  +C+
Sbjct:   198 ----FDARDCS 204

GO:0045909 "positive regulation of vasodilation" evidence=IBA

GO:0045776 "negative regulation of blood pressure" evidence=IBA

GO:0031284 "positive regulation of guanylate cyclase activity" evidence=IBA

GO:0016491 "oxidoreductase activity" evidence=IBA

GO:0007263 "nitric oxide mediated signal transduction" evidence=IBA

GO:0006809 "nitric oxide biosynthetic process" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

GO:0004517 "nitric-oxide synthase activity" evidence=IBA

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IBA

GO:0051926 "negative regulation of calcium ion transport" evidence=IEA

GO:0051346 "negative regulation of hydrolase activity" evidence=IEA

GO:0050880 "regulation of blood vessel size" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0043267 "negative regulation of potassium ion transport" evidence=IEA

GO:0034618 "arginine binding" evidence=IEA

GO:0034617 "tetrahydrobiopterin binding" evidence=IEA

GO:0034405 "response to fluid shear stress" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0014806 "smooth muscle hyperplasia" evidence=IEA

GO:0014740 "negative regulation of muscle hyperplasia" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0006527 "arginine catabolic process" evidence=IEA

GO:0005901 "caveola" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0003100 "regulation of systemic arterial blood pressure by endothelin" evidence=IEA

GO:0003057 "regulation of the force of heart contraction by chemical signal" evidence=IEA

GO:0002028 "regulation of sodium ion transport" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001542 "ovulation from ovarian follicle" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|P29473 NOS3 "Nitric oxide synthase, endothelial" [Bos taurus (taxid:9913)]

 Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 40/71 (56%), Positives = 50/71 (70%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct:   139 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query:    75 EWKRFDRGNCN 85
                 FD  +C+
Sbjct:   198 ----FDARDCS 204

GO:0004517 "nitric-oxide synthase activity" evidence=IDA

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0031284 "positive regulation of guanylate cyclase activity" evidence=IMP

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0006809 "nitric oxide biosynthetic process" evidence=IDA

GO:0006527 "arginine catabolic process" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005901 "caveola" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0007596 "blood coagulation" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|F1PV06 NOS3 "Nitric oxide synthase" [Canis lupus familiaris (taxid:9615)]

 Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 40/71 (56%), Positives = 50/71 (70%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct:   139 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query:    75 EWKRFDRGNCN 85
                 FD  +C+
Sbjct:   198 ----FDARDCS 204

GO:0004517 "nitric-oxide synthase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0006809 "nitric oxide biosynthetic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|Q9TUX8 NOS3 "Nitric oxide synthase, endothelial" [Canis lupus familiaris (taxid:9615)]

 Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 40/71 (56%), Positives = 50/71 (70%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct:   139 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 197

Query:    75 EWKRFDRGNCN 85
                 FD  +C+
Sbjct:   198 ----FDARDCS 204

GO:0005901 "caveola" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0004517 "nitric-oxide synthase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0006809 "nitric oxide biosynthetic process" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|F1PV05 NOS3 "Nitric oxide synthase" [Canis lupus familiaris (taxid:9615)]

 Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
 Identities = 40/71 (56%), Positives = 50/71 (70%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct:   145 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 203

Query:    75 EWKRFDRGNCN 85
                 FD  +C+
Sbjct:   204 ----FDARDCS 210

GO:0045909 "positive regulation of vasodilation" evidence=IBA

GO:0045776 "negative regulation of blood pressure" evidence=IBA

GO:0031284 "positive regulation of guanylate cyclase activity" evidence=IBA

GO:0016491 "oxidoreductase activity" evidence=IBA

GO:0007263 "nitric oxide mediated signal transduction" evidence=IBA

GO:0006809 "nitric oxide biosynthetic process" evidence=IBA

GO:0005829 "cytosol" evidence=IBA

GO:0004517 "nitric-oxide synthase activity" evidence=IBA

GO:0003958 "NADPH-hemoprotein reductase activity" evidence=IBA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

UNIPROTKB|F1SSJ3 NOS3 "Nitric oxide synthase" [Sus scrofa (taxid:9823)]

 Score = 199 (75.1 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 40/71 (56%), Positives = 49/71 (69%)

Query:    15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
             S+ RS S AH  R ++V+ EVA +GTY L E ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct:    89 SIKRSGSQAHEQRLQEVEAEVAATGTYQLRENELVFGAKQAWRNAPRCVGRIQWGKLQV- 147

Query:    75 EWKRFDRGNCN 85
                 FD  +C+
Sbjct:   148 ----FDARDCS 154

GO:0051926 "negative regulation of calcium ion transport" evidence=IEA

GO:0051346 "negative regulation of hydrolase activity" evidence=IEA

GO:0050880 "regulation of blood vessel size" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0043267 "negative regulation of potassium ion transport" evidence=IEA

GO:0034618 "arginine binding" evidence=IEA

GO:0034617 "tetrahydrobiopterin binding" evidence=IEA

GO:0034405 "response to fluid shear stress" evidence=IEA

GO:0031663 "lipopolysaccharide-mediated signaling pathway" evidence=IEA

GO:0030324 "lung development" evidence=IEA

GO:0014806 "smooth muscle hyperplasia" evidence=IEA

GO:0014740 "negative regulation of muscle hyperplasia" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0006809 "nitric oxide biosynthetic process" evidence=IEA

GO:0006527 "arginine catabolic process" evidence=IEA

GO:0005901 "caveola" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

GO:0003100 "regulation of systemic arterial blood pressure by endothelin" evidence=IEA

GO:0003057 "regulation of the force of heart contraction by chemical signal" evidence=IEA

GO:0002028 "regulation of sodium ion transport" evidence=IEA

GO:0001974 "blood vessel remodeling" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001542 "ovulation from ovarian follicle" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0004517 "nitric-oxide synthase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0050661 "NADP binding" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

GO:0010181 "FMN binding" evidence=IEA

GO:0005506 "iron ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q28969	NOS3_PIG	1, ., 1, 4, ., 1, 3, ., 3, 9	0.5633	0.5593	0.0547	yes	N/A
P70313	NOS3_MOUSE	1, ., 1, 4, ., 1, 3, ., 3, 9	0.5714	0.5508	0.0540	yes	N/A
P29473	NOS3_BOVIN	1, ., 1, 4, ., 1, 3, ., 3, 9	0.5633	0.5593	0.0547	yes	N/A
P29476	NOS1_RAT	1, ., 1, 4, ., 1, 3, ., 3, 9	0.5142	0.5508	0.0454	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	118
cd00795	412	cd00795, NOS_oxygenase_euk, Nitric oxide synthase	1e-31
pfam02898	366	pfam02898, NO_synthase, Nitric oxide synthase, oxy	2e-30
cd00575	356	cd00575, NOS_oxygenase, Nitric oxide synthase (NOS	3e-30
cd00794	353	cd00794, NOS_oxygenase_prok, Nitric oxide synthase	3e-14
COG4362	355	COG4362, COG4362, Nitric oxide synthase, oxygenase	2e-12

>gnl|CDD|238410 cd00795, NOS_oxygenase_euk, Nitric oxide synthase (NOS) eukaryotic oxygenase domain

 Score =  115 bits (289), Expect = 1e-31
 Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 5/71 (7%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AHLAR E+V +E+  +GTY LTE EL+FGAK AWRN+ RCIGRIQWSKLQ  
Sbjct: 69  SIKRSGSEAHLARLEEVTKEIEATGTYQLTEDELIFGAKQAWRNAPRCIGRIQWSKLQV- 127

Query: 75  EWKRFDRGNCN 85
               FD  +C 
Sbjct: 128 ----FDARDCT 134

NOS produces nitric oxide (NO) by catalyzing a five-electron heme-based oxidation of a guanidine nitrogen of L-arginine to L-citrulline via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine (NHA) as an intermediate. In mammals, there are three distinct NOS isozymes: neuronal (nNOS or NOS-1), cytokine-inducible (iNOS or NOS-2) and endothelial (eNOS or NOS-3) . Nitric oxide synthases are homodimers. In eukaryotes, each monomer has an N-terminal oxygenase domain, which binds to the substrate L-Arg, zinc, and to the cofactors heme and 5.6.7.8-(6R)-tetrahydrobiopterin (BH4) . Eukaryotic NOS's also have a C-terminal electron supplying reductase region, which is homologous to cytochrome P450 reductase and binds NADH, FAD and FMN. Length = 412

>gnl|CDD|202456 pfam02898, NO_synthase, Nitric oxide synthase, oxygenase domain

 Score =  111 bits (278), Expect = 2e-30
 Identities = 42/61 (68%), Positives = 49/61 (80%)

Query: 15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
          S+ RS S AHLAR E+V +E+  +GTY LTETELVFGAK AWRN+ RCIGRIQWSKLQ  
Sbjct: 23 SIKRSKSEAHLARLEEVNKEIEATGTYQLTETELVFGAKQAWRNAPRCIGRIQWSKLQVF 82

Query: 75 E 75
          +
Sbjct: 83 D 83

Length = 366

>gnl|CDD|238321 cd00575, NOS_oxygenase, Nitric oxide synthase (NOS) produces nitric oxide (NO) by catalyzing a five-electron heme-based oxidation of a guanidine nitrogen of L-arginine to L-citrulline via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine (NHA) as an intermediate

 Score =  110 bits (276), Expect = 3e-30
 Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 5/71 (7%)

Query: 15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
          S+ RS S AH AR E+V++E+  +GTY LTE EL++GAK+AWRN+ RCIGRIQWSKLQ  
Sbjct: 16 SIKRSGSEAHEARLEEVEKEIEATGTYQLTEEELIYGAKMAWRNAPRCIGRIQWSKLQV- 74

Query: 75 EWKRFDRGNCN 85
              FD  +  
Sbjct: 75 ----FDARDVT 81

In mammals, there are three distinct NOS isozymes: neuronal (nNOS or NOS-1), cytokine-inducible (iNOS or NOS-2) and endothelial (eNOS or NOS-3) . Nitric oxide synthases are homodimers. In eukaryotes, each monomer has an N-terminal oxygenase domain which binds to the substrate L-Arg, zinc, and to the cofactors heme and 5.6.7.8-(6R)-tetrahydrobiopterin (BH4) . Eukaryotic NOSs also have a C-terminal electron supplying reductase region, which is homologous to cytochrome P450 reductase and binds NADH, FAD and FMN. While prokaryotes can produce NO as a byproduct of denitrification, using a completely different set of enzymes than NOS, a few prokaryotes also have a NOS which consists solely of the NOS oxygenase domain. Prokaryotic NOS binds to the substrate L-Arg, zinc, and to the cofactors heme and tetrahydrofolate. Length = 356

>gnl|CDD|238409 cd00794, NOS_oxygenase_prok, Nitric oxide synthase (NOS) prokaryotic oxygenase domain

 Score = 66.7 bits (163), Expect = 3e-14
 Identities = 25/46 (54%), Positives = 32/46 (69%)

Query: 26 ARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKL 71
           R   V+ E+ ++GTY  T  ELV+GAK+AWRNS RCIGR+ W  L
Sbjct: 25 KRLAAVESEIDETGTYTHTTEELVYGAKMAWRNSNRCIGRLFWESL 70

NOS produces nitric oxide (NO) by catalyzing a five-electron heme-based oxidation of a guanidine nitrogen of L-arginine to L-citrulline via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine (NHA) as an intermediate. Nitric oxide synthases are homodimers. Most prokaryotes produce NO as a byproduct of denitrification, using a completely different set of enzymes than NOS. However, a few prokaryotes also have a NOS, consisting solely of the NOS oxygenase domain. Prokaryotic NOS binds to the substrate L-Arg, zinc, and to the cofactors heme and tetrahydrofolate. Length = 353

>gnl|CDD|226804 COG4362, COG4362, Nitric oxide synthase, oxygenase domain [Inorganic ion transport and metabolism / Amino acid transport and metabolism]

 Score = 61.4 bits (149), Expect = 2e-12
 Identities = 24/49 (48%), Positives = 32/49 (65%)

Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R   + RE+ ++GTY  T  EL  GAK+AWRNS RCIGR+ W  L  ++
Sbjct: 27 RLPDILREIDETGTYVHTSEELTHGAKMAWRNSNRCIGRLFWESLNVID 75

Length = 355

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
cd00575	356	NOS_oxygenase Nitric oxide synthase (NOS) produces	100.0
cd00795	412	NOS_oxygenase_euk Nitric oxide synthase (NOS) euka	100.0
cd00794	353	NOS_oxygenase_prok Nitric oxide synthase (NOS) pro	100.0
PF02898	372	NO_synthase: Nitric oxide synthase, oxygenase doma	100.0
COG4362	355	Nitric oxide synthase, oxygenase domain [Inorganic	99.94

>cd00575 NOS_oxygenase Nitric oxide synthase (NOS) produces nitric oxide (NO) by catalyzing a five-electron heme-based oxidation of a guanidine nitrogen of L-arginine to L-citrulline via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine (NHA) as an intermediate

Probab=100.00  E-value=2.7e-38  Score=265.89  Aligned_cols=97  Identities=45%  Similarity=0.709  Sum_probs=91.0

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|+++.+++++..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     +|+|+|+
T Consensus         7 ~~Fi~~~y~e~~~~~~~~~~~Rl~ev~~eI~~TGtY~hT~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~   81 (356)
T cd00575           7 KDFINQYYSSIKRSGSEAHEARLEEVEKEIEATGTYQLTEEELIYGAKMAWRNAPRCIGRIQWSKLQV-----FDARDVT   81 (356)
T ss_pred             HHHHHHHHHhhCcCCcHHHHHHHHHHHHHHHhcCceeCCHHHHHHHHHHHHhcCccccccccccccee-----eeccCCC
Confidence            48999999999998899999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhcccc-CCccee
Q psy8997          86 CYGLIVPKSKREGRQD-NATSIR  107 (118)
Q Consensus        86 t~~~i~~~~~~~~~~~-~~~~~~  107 (118)
                      |+++||+++.+|++.. |.-.||
T Consensus        82 t~~~m~~al~~Hl~~ATN~G~Ir  104 (356)
T cd00575          82 TAQEMFEAICNHIKYATNGGNIR  104 (356)
T ss_pred             CHHHHHHHHHHHHHHhcCCCccc
Confidence            9999999999999863 444443

In mammals, there are three distinct NOS isozymes: neuronal (nNOS or NOS-1), cytokine-inducible (iNOS or NOS-2) and endothelial (eNOS or NOS-3) . Nitric oxide synthases are homodimers. In eukaryotes, each monomer has an N-terminal oxygenase domain which binds to the substrate L-Arg, zinc, and to the cofactors heme and 5.6.7.8-(6R)-tetrahydrobiopterin (BH4) . Eukaryotic NOSs also have a C-terminal electron supplying reductase region, which is homologous to cytochrome P450 reductase and binds NADH, FAD and FMN. While prokaryotes can produce NO as a byproduct of denitrification, using a completely different set of enzymes than NOS, a few prokaryotes also have a NOS which consists solely of the NOS oxy

>cd00795 NOS_oxygenase_euk Nitric oxide synthase (NOS) eukaryotic oxygenase domain

Probab=100.00  E-value=1.2e-37  Score=265.70  Aligned_cols=97  Identities=47%  Similarity=0.751  Sum_probs=91.1

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|+++.++++|..||++|.+||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|+|+
T Consensus        60 ~~Fi~~~y~e~~~~~~~~~~~Rl~ev~~eI~~TGtY~hT~eEL~yGAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~  134 (412)
T cd00795          60 KDFINQYYSSIKRSGSEAHLARLEEVTKEIEATGTYQLTEDELIFGAKQAWRNAPRCIGRIQWSKLQV-----FDARDCT  134 (412)
T ss_pred             HHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHcccceeCCHHHHHHHHHHHHhcCccccCccccccCee-----eeccCCC
Confidence            58999999999999899999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhcccc-CCccee
Q psy8997          86 CYGLIVPKSKREGRQD-NATSIR  107 (118)
Q Consensus        86 t~~~i~~~~~~~~~~~-~~~~~~  107 (118)
                      |+++||+++.+|++.. |.-.||
T Consensus       135 t~~~m~~al~~Hl~~ATN~G~Ir  157 (412)
T cd00795         135 TAQEMFEAICNHIKYATNKGNLR  157 (412)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCcc
Confidence            9999999999999863 444443

NOS produces nitric oxide (NO) by catalyzing a five-electron heme-based oxidation of a guanidine nitrogen of L-arginine to L-citrulline via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine (NHA) as an intermediate. In mammals, there are three distinct NOS isozymes: neuronal (nNOS or NOS-1), cytokine-inducible (iNOS or NOS-2) and endothelial (eNOS or NOS-3) . Nitric oxide synthases are homodimers. In eukaryotes, each monomer has an N-terminal oxygenase domain, which binds to the substrate L-Arg, zinc, and to the cofactors heme and 5.6.7.8-(6R)-tetrahydrobiopterin (BH4) . Eukaryotic NOS's also have a C-terminal electron supplying reductase region, which is homologous to cytochrome P450 reductase and binds NADH, FAD and FMN.

>cd00794 NOS_oxygenase_prok Nitric oxide synthase (NOS) prokaryotic oxygenase domain

Probab=100.00  E-value=1.8e-37  Score=260.77  Aligned_cols=95  Identities=31%  Similarity=0.472  Sum_probs=88.5

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|++  +++++..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     +|+|+|+
T Consensus         7 ~~Fi~~~y~e~~--~~~~~~~Rl~ev~~eI~~TGtY~hT~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~   79 (353)
T cd00794           7 RAFLTNMYEELG--ETGELNKRLAAVESEIDETGTYTHTTEELVYGAKMAWRNSNRCIGRLFWESLNV-----RDARDVR   79 (353)
T ss_pred             HHHHHHHHHhcC--CcHHHHHHHHHHHHHHHhcCceeCCHHHHHHHHHHHHhcCccccccccccccee-----EeccCCC
Confidence            489999999999  488999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhcccc-CCccee
Q psy8997          86 CYGLIVPKSKREGRQD-NATSIR  107 (118)
Q Consensus        86 t~~~i~~~~~~~~~~~-~~~~~~  107 (118)
                      |+++||+++.+|++.. |.-.||
T Consensus        80 t~~~m~~al~~Hl~~ATN~G~Ir  102 (353)
T cd00794          80 TEEEVAEALLDHITEATNGGKIR  102 (353)
T ss_pred             CHHHHHHHHHHHHHHhcCCCccc
Confidence            9999999999999863 444443

NOS produces nitric oxide (NO) by catalyzing a five-electron heme-based oxidation of a guanidine nitrogen of L-arginine to L-citrulline via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine (NHA) as an intermediate. Nitric oxide synthases are homodimers. Most prokaryotes produce NO as a byproduct of denitrification, using a completely different set of enzymes than NOS. However, a few prokaryotes also have a NOS, consisting solely of the NOS oxygenase domain. Prokaryotic NOS binds to the substrate L-Arg, zinc, and to the cofactors heme and tetrahydrofolate.

>PF02898 NO_synthase: Nitric oxide synthase, oxygenase domain; InterPro: IPR004030 Nitric oxide synthase (1

Probab=100.00  E-value=6e-37  Score=258.88  Aligned_cols=90  Identities=40%  Similarity=0.606  Sum_probs=80.1

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|++++++++|..||++|+++|++||||+||++||+||||||||||+|||||+||++|+|     +|+||++
T Consensus        14 ~~Fi~~~y~e~~~~~~~~~~~Rl~ev~~ei~~tGtY~~T~eEL~~Gak~AWRNs~RCIGRl~W~~L~V-----~D~R~~~   88 (372)
T PF02898_consen   14 KEFIDQYYSELKRSGSEAHERRLEEVRREIETTGTYTHTYEELTYGAKMAWRNSNRCIGRLFWSSLQV-----FDARHVT   88 (372)
T ss_dssp             HHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHT-TT-TTGGGTTG-EE-----EEETTS-
T ss_pred             HHHHHHHHHhcCCccchHHHHHHHHHHhhhcCCCCCccChHHHHhhhHHHhccCCcCCCcccccccee-----ecCCCCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus        89 t~~~~~~al~~Hl~~  103 (372)
T PF02898_consen   89 TAEEMFEALCEHLRY  103 (372)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999985

14.13.39 from EC) (NOS) enzymes produce nitric oxide (NO) by catalysing a five-electron oxidation of a guanidino nitrogen of L-arginine (L-Arg). Oxidation of L-Arg to L-citrulline occurs via two successive monooxygenation reactions producing N(omega)-hydroxy-L-arginine as an intermediate. 2 mol of O(2) and 1.5 mol of NADPH are consumed per mole of NO formed []. Arginine-derived NO synthesis has been identified in mammals, fish, birds, invertebrates, plants, and bacteria []. Best studied are mammals, where three distinct genes encode NOS isozymes: neuronal (nNOS or NOS-1), cytokine-inducible (iNOS or NOS-2) and endothelial (eNOS or NOS-3) []. iNOS and nNOS are soluble and found predominantly in the cytosol, while eNOS is membrane associated. The enzymes exist as homodimers, each monomer consisting of two major domains: an N-terminal oxygenase domain, which belongs to the class of haem-thiolate proteins, and a C-terminal reductase domain, which is homologous to NADPH:P450 reductase (1.6.2.4 from EC). The interdomain linker between the oxygenase and reductase domains contains a calmodulin (CaM)-binding sequence. NOSs are the only enzymes known to simultaneously require five bound cofactors animal NOS isozymes are catalytically self-sufficient. The electron flow in the NO synthase reaction is: NADPH --> FAD --> FMN --> haem --> O(2). eNOS localisation to endothelial membranes is mediated by cotranslational N-terminal myristoylation and post-translational palmitoylation []. The subcellular localisation of nNOS in skeletal muscle is mediated by anchoring of nNOS to dystrophin. nNOS contains an additional N-terminal domain, the PDZ domain []. Some bacteria, like Bacillus halodurans, Bacillus subtilis or Deinococcus radiodurans, contain homologs of NOS oxygenase domain. The pattern is directed against the N-terminal haem binding site. This entry represents the oxygenase domain of NOS.; GO: 0004517 nitric-oxide synthase activity, 0006809 nitric oxide biosynthetic process, 0055114 oxidation-reduction process; PDB: 2FBZ_X 2AMO_A 2AN0_A 1M7V_A 2FC1_A 2FC2_B 1M7Z_A 2AN2_A 2ORS_A 1QW5_B ....

>COG4362 Nitric oxide synthase, oxygenase domain [Inorganic ion transport and metabolism / Amino acid transport and metabolism]

Probab=99.94  E-value=1.4e-28  Score=205.45  Aligned_cols=85  Identities=32%  Similarity=0.469  Sum_probs=80.4

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -.||..||.++.      +..||.+|..||+.||||.||.+||+||||||||||||||||+||++|.|     +|+|+++
T Consensus        12 ~aFl~~~yeE~g------~~~rL~di~~ei~etGty~hT~~EL~~GAkmAWRNSnRCiGRLfWesL~V-----iD~Rdl~   80 (355)
T COG4362          12 RAFLRRFYEEMG------IEKRLPDILREIDETGTYVHTSEELTHGAKMAWRNSNRCIGRLFWESLNV-----IDLRDLN   80 (355)
T ss_pred             HHHHHHHHHHhC------cccchHHHHHHHHhhCCeeccHHHHhhhhhhhhhcccchHHHHHHhhccc-----chhhhcc
Confidence            369999999998      47899999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhcccc
Q psy8997          86 CYGLIVPKSKREGRQD  101 (118)
Q Consensus        86 t~~~i~~~~~~~~~~~  101 (118)
                      |+++|.+++..|+-+.
T Consensus        81 t~e~~~eal~~Hi~~A   96 (355)
T COG4362          81 TEEEVYEALLQHITDA   96 (355)
T ss_pred             cHHHHHHHHHHHHHhh
Confidence            9999999999998763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	118
3e7s_B	431	Structure Of Bovine Enos Oxygenase Domain With Inhi		3e-16
1zzt_A	416	Bovine Enos N368dV106M DOUBLE MUTANT WITH L-N(Omega		3e-16
3e7s_A	431	Structure Of Bovine Enos Oxygenase Domain With Inhi		3e-16
1nse_A	444	Bovine Endothelial Nitric Oxide Synthase Length = 4		3e-16
1i83_A	444	Bovine Endothelial Nitric Oxide Synthase Heme Domai		3e-16
3n67_A	444	Structure Of Endothelial Nitric Oxide Synthase N368		3e-16
3n6b_A	444	Structure Of Endothelial Nitric Oxide Synthase H373		3e-16
3nlh_A	444	Structure Of Endothelial Nitric Oxide Synthase Heme		3e-16
1zzs_A	416	Bovine Enos N368d Single Mutant With L-N(Omega)-Nit		3e-16
1q2o_A	416	Bovine Endothelial Nitric Oxide Synthase N368d Muta		3e-16
1p6l_A	417	Bovine Endothelial Nos Heme Domain With L-N(Omega)-		3e-16
1rs8_A	416	Bovine Endothelial Nos Heme Domain With D-Lysine-D-		3e-16
3rqo_A	443	Structure Of The Endothelial Nitric Oxide Synthase		3e-16
3nos_A	427	Human Endothelial Nitric Oxide Synthase With Argini		4e-16
1m9m_A	415	Human Endothelial Nitric Oxide Synthase With 6- Nit		4e-16
1lzx_A	419	Rat Neuronal Nos Heme Domain With Ng-Hydroxy-L-Argi		1e-15
1zzq_A	420	Rat Nnos D597n Mutant With L-N(Omega)-Nitroarginine		1e-15
2g6h_A	420	Structure Of Rat Nnos Heme Domain (Bh4 Bound) In Th		1e-15
1om5_A	421	Structure Of Rat Neuronal Nos Heme Domain With 3-Br		1e-15
1p6k_A	421	Rat Neuronal Nos D597n Mutant Heme Domain With L-N(		1e-15
3fc5_A	422	G586s Mutant Nnosoxy Length = 422		1e-15
2g6j_A	420	Structure Of Rat Nnos (l337n) Heme Domain (4-aminob		1e-15
1zzr_A	420	Rat Nnos D597nM336V DOUBLE MUTANT WITH L-N(Omega)-N		1e-15
3jws_A	422	Structure Of Neuronal Nitric Oxide Synthase R349a M		1e-15
1om4_A	422	Structure Of Rat Neuronal Nos Heme Domain With L-ar		1e-15
1qw6_A	420	Rat Neuronal Nitric Oxide Synthase Oxygenase Domain		1e-15
3jx0_A	422	Structure Of Rat Neuronal Nitric Oxide Synthase D59		1e-15
3n65_A	422	Structure Of Neuronal Nitric Oxide Synthase S602h M		1e-15
3dqr_A	422	Structure Of Neuronal Nos D597nM336V MUTANT HEME DO		1e-15
3jx6_A	422	Structure Of Neuronal Nitric Oxide Synthase D597nM3		1e-15
1jwj_A	433	Murine Inducible Nitric Oxide Synthase Oxygenase Di		1e-14
1jwk_A	434	Murine Inducible Nitric Oxide Synthase Oxygenase Di		1e-14
1m8e_A	434	Inducible Nitric Oxide Synthase With 7-Nitroindazol		2e-14
1qom_A	440	Murine Inducible Nitric Oxide Synthase Oxygenase Di		2e-14
1r35_A	433	Murine Inducible Nitric Oxide Synthase Oxygenase Di		2e-14
1n2n_A	419	Crystal Structure Of Cyanide Complex Of The Oxygena		2e-14
2orq_A	389	Murine Inducible Nitric Oxide Synthase Oxygenase Do		2e-14
1dww_A	420	Murine Inducible Nitric Oxide Synthase Oxygenase Di		2e-14
2bhj_A	422	Murine Ino Synthase With Coumarin Inhibitor Length		2e-14
1nod_A	423	Murine Inducible Nitric Oxide Synthase Oxygenase Di		2e-14
1dd7_A	389	Murine Inducible Nitric Oxide Synthase Oxygenase Do		2e-14
1noc_A	388	Murine Inducible Nitric Oxide Synthase Oxygenase Do		2e-14
3dwj_A	431	Heme-Proximal W188h Mutant Of Inducible Nitric Oxid		3e-13
1nsi_A	431	Human Inducible Nitric Oxide Synthase, Zn-Bound, L-		3e-13
3ej8_A	424	Structure Of Double Mutant Of Human Inos Oxygenase		3e-13
4nos_A	427	Human Inducible Nitric Oxide Synthase With Inhibito		3e-13
3e7g_A	424	Structure Of Human Inosox With Inhibitor Ar-C95791		4e-13
1mjt_A	347	Crystal Structure Of Sanos, A Bacterial Nitric Oxid		6e-11
2flq_A	375	Crystal Structure Of Nitric Oxide Synthase From Geo		2e-08
2an0_A	361	Crystal Structure Of The P332g Mutant Of The Bacill		2e-08
2fbz_X	363	Heme-No Complex In A Bacterial Nitric Oxide Synthas		3e-08
1m7z_A	361	Structure Of Nitric Oxide Synthase Heme Protein Fro		3e-08
2amo_A	362	Loose Dimer Of A Bacillus Subtilis Nitric Oxide Syn		4e-08
2an2_A	360	P332g, A333s Double Mutant Of The Bacillus Subtilis		4e-08
2fc2_A	363	No-Heme Complex In A Bacterial Nitric Oxide Synthas		6e-08

>pdb|3E7S|B Chain B, Structure Of Bovine Enos Oxygenase Domain With Inhibitor Ar- C95791 Length = 431

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 83  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 141
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 142 ----FDARDCS 148

>pdb|1ZZT|A Chain A, Bovine Enos N368dV106M DOUBLE MUTANT WITH L-N(Omega)- Nitroarginine-(4r)-Amino-L-Proline Amide Bound Length = 416

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 73  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 131
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 132 ----FDARDCS 138

>pdb|3E7S|A Chain A, Structure Of Bovine Enos Oxygenase Domain With Inhibitor Ar- C95791 Length = 431

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 83  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 141
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 142 ----FDARDCS 148

>pdb|1NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase Length = 444

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 101 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 159
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 160 ----FDARDCS 166

>pdb|1I83|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed With N1,N14-Bis((S-Methyl)isothioureido)tetradecane (H4b Free) Length = 444

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 101 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 159
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 160 ----FDARDCS 166

>pdb|3N67|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M DOUBLE Mutant Heme Domain Complexed With 6,6'-(2,2'-(5-Amino-1,3-Phenylene) Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine) Length = 444

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 101 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 159
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 160 ----FDARDCS 166

>pdb|3N6B|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s Single Mutant Heme Domain Complexed With 6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane- 2,1-Diyl))bis(4-Methylpyridin-2-Amine) Length = 444

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 101 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 159
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 160 ----FDARDCS 166

>pdb|3NLH|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain N368d Mutant Complexed With 6-{{(3's,4's)-3'-[2"-(3'''- Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4- Methylpyridin- 2-Amine Length = 444

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 101 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 159
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 160 ----FDARDCS 166

>pdb|1ZZS|A Chain A, Bovine Enos N368d Single Mutant With L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide Bound Length = 416

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 73  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 131
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 132 ----FDARDCS 138

>pdb|1Q2O|A Chain A, Bovine Endothelial Nitric Oxide Synthase N368d Mutant Heme Domain Dimer With L-N(Omega)-Nitroarginine-2,4-L-Diaminobutyramide Bound Length = 416

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 73  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 131
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 132 ----FDARDCS 138

>pdb|1P6L|A Chain A, Bovine Endothelial Nos Heme Domain With L-N(Omega)-Nitroarginine-2,4- L-Diaminobutyric Amide Bound Length = 417

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 73  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 131
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 132 ----FDARDCS 138

>pdb|1RS8|A Chain A, Bovine Endothelial Nos Heme Domain With D-Lysine-D-Nitroarginine Amide Bound Length = 416

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 73  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 131
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 132 ----FDARDCS 138

>pdb|3RQO|A Chain A, Structure Of The Endothelial Nitric Oxide Synthase Heme Domain In Complex With 6-(((3r,4r)-4-(2-((1s,2r1R,2S)-2-(3-Clorophenyl) Cyclopropylamino)ethoxy)pyrrolidin-3-Yl)methyl)-4- Methylpyridin-2- Amine Length = 443

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 100 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 158
Query: 75  EWKRFDRGNCN 85
               FD  +C+
Sbjct: 159 ----FDARDCS 165

>pdb|3NOS|A Chain A, Human Endothelial Nitric Oxide Synthase With Arginine Substrate Length = 427

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 72  SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|1M9M|A Chain A, Human Endothelial Nitric Oxide Synthase With 6- Nitroindazole Bound Length = 415

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 71  SIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQV- 129
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 130 ----FDARDC 135

>pdb|1LZX|A Chain A, Rat Neuronal Nos Heme Domain With Ng-Hydroxy-L-Arginine Bound Length = 419

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 70  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 128
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 129 ----FDARDC 134

>pdb|1ZZQ|A Chain A, Rat Nnos D597n Mutant With L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide Bound Length = 420

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 70  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 128
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 129 ----FDARDC 134

>pdb|2G6H|A Chain A, Structure Of Rat Nnos Heme Domain (Bh4 Bound) In The Reduced Form Length = 420

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 70  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 128
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 129 ----FDARDC 134

>pdb|1OM5|A Chain A, Structure Of Rat Neuronal Nos Heme Domain With 3-Bromo-7- Nitroindazole Bound Length = 421

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|1P6K|A Chain A, Rat Neuronal Nos D597n Mutant Heme Domain With L-N(Omega)- Nitroarginine-2,4-L-Diaminobutyric Amide Bound Length = 421

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|3FC5|A Chain A, G586s Mutant Nnosoxy Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|2G6J|A Chain A, Structure Of Rat Nnos (l337n) Heme Domain (4-aminobiopterin Bound) Complexed With No Length = 420

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 70  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 128
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 129 ----FDARDC 134

>pdb|1ZZR|A Chain A, Rat Nnos D597nM336V DOUBLE MUTANT WITH L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide Bound Length = 420

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 70  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 128
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 129 ----FDARDC 134

>pdb|3JWS|A Chain A, Structure Of Neuronal Nitric Oxide Synthase R349a Mutant Hem Complexed With N1-[(3' S,4's)-4'-((6"-Amino-4"-Methylpyridi Methyl)pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane- 1,2- Tetrahydrochloride Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|1OM4|A Chain A, Structure Of Rat Neuronal Nos Heme Domain With L-arginine Bound Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|1QW6|A Chain A, Rat Neuronal Nitric Oxide Synthase Oxygenase Domain In Complex With N- Omega-Propyl-L-Arg. Length = 420

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|3JX0|A Chain A, Structure Of Rat Neuronal Nitric Oxide Synthase D597n Mutant Domain In Complex With N1-{(3's,4's)-4'-[(6"-Amino-4"-Methy 2"-Yl)methyl]pyrrolidin-3'-Yl}-N2-(3'- Fluorophenethyl)ethan Diamine Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|3N65|A Chain A, Structure Of Neuronal Nitric Oxide Synthase S602h Mutant Heme Domain In Complex With 6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-2,1-Diyl)) Bis(4-Methylpyridin-2-Amine) Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|3DQR|A Chain A, Structure Of Neuronal Nos D597nM336V MUTANT HEME DOMAIN IN Complex With A Inhibitor (+-)-N1-{cis-4'-[(6"-Aminopyridin- 2"-Yl)methyl]pyrrolidin-3'-Yl}ethane-1,2-Diamine Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|3JX6|A Chain A, Structure Of Neuronal Nitric Oxide Synthase D597nM336VY706 Heme Domain Complexed With N1-[(3' R,4' R)-4'-((6"-Amino-4" Methylpyridin-2"-Yl)methyl)pyrrolidin-3'-Yl]-N2-(3'- Fluorop Ethane-1,2-Diamine Tetrahydrochloride Length = 422

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV- 130
Query: 75  EWKRFDRGNC 84
               FD  +C
Sbjct: 131 ----FDARDC 136

>pdb|1JWJ|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (delta 65) With W457f Mutation At Tetrahydrobiopterin Binding Site Length = 433

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 91  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 145
Query: 84  CN 85
           C+
Sbjct: 146 CS 147

>pdb|1JWK|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) With W457a Mutation At Tetrahydrobiopterin Binding Site Length = 434

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 92  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 146
Query: 84  CN 85
           C+
Sbjct: 147 CS 148

>pdb|1M8E|A Chain A, Inducible Nitric Oxide Synthase With 7-Nitroindazole Bound Length = 434

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 92  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 146
Query: 84  CN 85
           C+
Sbjct: 147 CS 148

>pdb|1QOM|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) With Swapped N-Terminal Hook Length = 440

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 92  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 146
Query: 84  CN 85
           C+
Sbjct: 147 CS 148

>pdb|1R35|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer, Tetrahydrobiopterin And 4r-Fluoro-N6-Ethanimidoyl-L-Lysine Length = 433

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 91  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 145
Query: 84  CN 85
           C+
Sbjct: 146 CS 147

>pdb|1N2N|A Chain A, Crystal Structure Of Cyanide Complex Of The Oxygenase Domain Of Inducible Nitric Oxide Synthase. Length = 419

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 80  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 134
Query: 84  CN 85
           C+
Sbjct: 135 CS 136

>pdb|2ORQ|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) 4-(Imidazol-1-Yl)phenol And Piperonylamine Complex Length = 389

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24 HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
          HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 43 HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 97
Query: 84 CN 85
          C+
Sbjct: 98 CS 99

>pdb|1DWW|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer N-Hydroxyarginine And Dihydrobiopterin Length = 420

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 80  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 134
Query: 84  CN 85
           C+
Sbjct: 135 CS 136

>pdb|2BHJ|A Chain A, Murine Ino Synthase With Coumarin Inhibitor Length = 422

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 80  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 134
Query: 84  CN 85
           C+
Sbjct: 135 CS 136

>pdb|1NOD|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) With Tetrahydrobiopterin And Substrate L-Arginine Length = 423

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 80  HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 134
Query: 84  CN 85
           C+
Sbjct: 135 CS 136

>pdb|1DD7|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) (N-[(1,3-Benzodioxol-5-Yl)methyl]-1-[2-(1h- Imidazol-1-Yl)pyrimidin-4-Yl]-4-(Methoxycarbonyl)- Piperazine-2-Acetamide Complex Length = 389

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24 HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
          HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 43 HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 97
Query: 84 CN 85
          C+
Sbjct: 98 CS 99

>pdb|1NOC|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Domain (Delta 114) Complexed With Type I E. Coli Chloramphenicol Acetyl Transferase And Imidazole Length = 388

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 24 HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
          HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ      FD  N
Sbjct: 42 HLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARN 96
Query: 84 CN 85
          C+
Sbjct: 97 CS 98

>pdb|3DWJ|A Chain A, Heme-Proximal W188h Mutant Of Inducible Nitric Oxide Synthase Length = 431

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K+A RN+ RCIGRIQWS LQ      FD  N
Sbjct: 91  HLARLEAVTKEIETTGTYQLTLDELIFATKMAHRNAPRCIGRIQWSNLQV-----FDARN 145
Query: 84  CN 85
           C+
Sbjct: 146 CS 147

>pdb|1NSI|A Chain A, Human Inducible Nitric Oxide Synthase, Zn-Bound, L-Arg Complex Length = 431

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K AWRN+ RCIGRIQWS LQ      FD  +
Sbjct: 89  HLARVEAVTKEIETTGTYQLTGDELIFATKQAWRNAPRCIGRIQWSNLQV-----FDARS 143
Query: 84  CN 85
           C+
Sbjct: 144 CS 145

>pdb|3EJ8|A Chain A, Structure Of Double Mutant Of Human Inos Oxygenase Domain With Bound Immidazole Length = 424

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGN 83
           HLAR E V +E+  +GTY LT  EL+F  K AWRN+ RCIGRIQWS LQ      FD  +
Sbjct: 81  HLARVEAVTKEIETTGTYQLTGDELIFATKQAWRNAPRCIGRIQWSNLQV-----FDARS 135
Query: 84  CN 85
           C+
Sbjct: 136 CS 137

>pdb|4NOS|A Chain A, Human Inducible Nitric Oxide Synthase With Inhibitor Length = 427

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
           HLAR E V +E+  +GTY LT  EL+F  K AWRN+ RCIGRIQWS LQ  +
Sbjct: 81  HLARVEAVTKEIETTGTYQLTGDELIFATKQAWRNAPRCIGRIQWSNLQVFD 132

>pdb|3E7G|A Chain A, Structure Of Human Inosox With Inhibitor Ar-C95791 Length = 424

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 24  HLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
           HLAR E V +E+  +GTY LT  EL+F  K AWRN+ RCIGRIQWS LQ  +
Sbjct: 81  HLARVEAVTKEIETTGTYQLTGDELIFATKQAWRNAPRCIGRIQWSNLQVFD 132

>pdb|1MJT|A Chain A, Crystal Structure Of Sanos, A Bacterial Nitric Oxide Synthase Oxygenase Protein, In Complex With Nad+ And Seitu Length = 347

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 35/49 (71%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R   ++ E+ ++GTY  TE EL++GAK+AWRNS RCIGR+ W  L  ++
Sbjct: 28 RLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLNVID 76

>pdb|2FLQ|A Chain A, Crystal Structure Of Nitric Oxide Synthase From Geobacillus Stearothermophilus (Atcc 12980) Complexed With L-Arginine Length = 375

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R  +++ EV Q+GTY  T  EL +GAK+AWR+S RCIGR+ W  L  ++
Sbjct: 41 RVNEIRWEVEQTGTYRHTYEELSYGAKMAWRHSNRCIGRLFWQSLHVID 89

>pdb|2AN0|A Chain A, Crystal Structure Of The P332g Mutant Of The Bacillus Subtilis Nos Length = 361

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R + ++ E+ ++G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  ++
Sbjct: 31 RLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVID 79

>pdb|2FBZ|X Chain X, Heme-No Complex In A Bacterial Nitric Oxide Synthase Length = 363

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R + ++ E+ ++G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  ++
Sbjct: 31 RLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVID 79

>pdb|1M7Z|A Chain A, Structure Of Nitric Oxide Synthase Heme Protein From Bacillus Subtilis With N-Hydroxy-Arginine And Tetrahydrofolate Bound Length = 361

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R + ++ E+ ++G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  ++
Sbjct: 31 RLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVID 79

>pdb|2AMO|A Chain A, Loose Dimer Of A Bacillus Subtilis Nitric Oxide Synthase Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R + ++ E+  +G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  ++
Sbjct: 30 RLDSIKSEIDLTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVID 78

>pdb|2AN2|A Chain A, P332g, A333s Double Mutant Of The Bacillus Subtilis Nitric Oxide Synthase Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R + ++ E+  +G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  ++
Sbjct: 30 RLDSIKSEIDLTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVID 78

>pdb|2FC2|A Chain A, No-Heme Complex In A Bacterial Nitric Oxide Synthase. An Fe(Iii)-No May Cause Nitrosation. Length = 363

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 27 RWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLE 75
          R + ++ E+  +G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  ++
Sbjct: 31 RLDSIKSEIDLTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVID 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	118
1d0c_A	444	Bovine endothelial nitric oxide synthase heme DOM;	6e-23
2ort_A	389	Nitric oxide synthase, inducible; L-arginine monoo	9e-23
3e7m_A	433	Nitric oxide synthase, inducible; NOS, heme, tetra	2e-22
3n5w_A	422	Nitric oxide synthase; heme enzyme, substrate inhi	5e-22
1mjt_A	347	Nitric-oxide synthase homolog; sanos, NO, NOS, bac	1e-21
2flq_A	375	Nitric oxide synthase; thermostable enzyme, oxidor	3e-21
1m7v_A	363	Nitric oxide synthase; pterin oxygenase, bacteria,	3e-21

>1d0c_A Bovine endothelial nitric oxide synthase heme DOM; alpha-beta fold, oxidoreductase; HET: HEM INE; 1.65A {Bos taurus} SCOP: d.174.1.1 PDB: 1d0o_A* 1d1v_A* 1d1w_A* 1d1x_A* 1d1y_A* 1dm6_A* 1dm7_A* 1dm8_A* 1dmi_A* 1dmj_A* 1dmk_A* 1ed4_A* 1ed5_A* 1ed6_A* 1foi_A* 1foj_A* 1fol_A* 1foo_A* 1fop_A* 1nse_A* ... Length = 444

 Score = 91.2 bits (226), Expect = 6e-23
 Identities = 37/60 (61%), Positives = 45/60 (75%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ  
Sbjct: 101 SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQVF 160

>2ort_A Nitric oxide synthase, inducible; L-arginine monooxygenase, heme, dimerization, inhibitor, NOS, oxidoreductase; HET: HEM 342; 1.87A {Mus musculus} PDB: 1dd7_A* 2oro_A* 2orq_A* 2orr_A* 2ors_A* 2orp_A* 1nos_A* 1noc_A* 2nos_A* 1df1_A* 1nod_A* 2nod_A* 3nod_A* 3nw2_A* 2bhj_A* 1dwv_A* 1dww_A* 1dwx_A* 1n2n_A* 1qw4_A* ... Length = 389

 Score = 89.9 bits (223), Expect = 9e-23
 Identities = 32/60 (53%), Positives = 39/60 (65%)

Query: 15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
          S   +    HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ  
Sbjct: 34 SFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQVF 93

>3e7m_A Nitric oxide synthase, inducible; NOS, heme, tetrahydrobiopterin, oxido calmodulin-binding, FAD, FMN, iron, metal-binding, NADP, oxidoreductase; HET: HEM H4B AT2; 2.00A {Mus musculus} SCOP: d.174.1.1 PDB: 2y37_A* 1r35_A* 3e67_A* 3e68_A* 3e6l_A* 3e6n_A* 3e6o_A* 3e6t_A* 3e7i_A* 3e65_A* 3e7t_A* 3eai_A* 3ebd_A* 3ebf_A* 3nqs_A* 1m8d_A* 1m8e_A* 1m8h_A* 1m8i_A* 1m9t_A* ... Length = 433

 Score = 89.2 bits (221), Expect = 2e-22
 Identities = 32/60 (53%), Positives = 39/60 (65%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S   +    HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ  
Sbjct: 82  SFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQVF 141

>3n5w_A Nitric oxide synthase; heme enzyme, substrate inhibitor, Zn oxidoreductase, oxidoreductase-oxidoreductase inhibitor COM; HET: HEM XFJ; 1.73A {Rattus norvegicus} PDB: 2hx3_A* 2hx4_A* 3b3m_A* 3b3n_A* 3b3o_A* 3b3p_A* 3hsn_A* 3hso_A* 3hsp_A* 3jt3_A* 3jt4_A* 3jt5_A* 3jt6_A* 3jt7_A* 3jt8_A* 3jt9_A* 3jta_A* 3n2r_A* 3n5v_A* 1om4_A* ... Length = 422

 Score = 88.4 bits (219), Expect = 5e-22
 Identities = 33/60 (55%), Positives = 45/60 (75%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ  
Sbjct: 72  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVF 131

>1mjt_A Nitric-oxide synthase homolog; sanos, NO, NOS, bacterial, MRSA, seitu, oxidoreductase; HET: SUC HEM NAD; 2.40A {Staphylococcus aureus} SCOP: d.174.1.1 Length = 347

 Score = 86.5 bits (214), Expect = 1e-21
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 18 RSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
            ++     R   ++ E+ ++GTY  TE EL++GAK+AWRNS RCIGR+ W  L  +
Sbjct: 19 HYETQIINKRLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLNVI 75

>2flq_A Nitric oxide synthase; thermostable enzyme, oxidoreductase; HET: ARG HEM; 3.20A {Geobacillus stearothermophilus} Length = 375

 Score = 85.7 bits (212), Expect = 3e-21
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 15 SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
           + +S+      R  +++ EV Q+GTY  T  EL +GAK+AWR+S RCIGR+ W  L   
Sbjct: 30 ELGKSEQEIK-RRVNEIRWEVEQTGTYRHTYEELSYGAKMAWRHSNRCIGRLFWQSLHV- 87

Query: 75 EWKRFDRGNCN 85
               D     
Sbjct: 88 ----IDAREAV 94

>1m7v_A Nitric oxide synthase; pterin oxygenase, bacteria, heme, oxidoreductase; HET: ARG HEM THG; 1.95A {Bacillus subtilis} SCOP: d.174.1.1 PDB: 2fbz_X* 2fc1_A* 1m7z_A* 2fc2_A* 2an0_A* 2amo_A* 2an2_A* Length = 363

 Score = 85.7 bits (212), Expect = 3e-21
 Identities = 22/55 (40%), Positives = 34/55 (61%)

Query: 20 DSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTL 74
                 R + ++ E+ ++G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L  +
Sbjct: 24 KEEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNVI 78

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	118
3n5w_A	422	Nitric oxide synthase; heme enzyme, substrate inhi	100.0
3e7m_A	433	Nitric oxide synthase, inducible; NOS, heme, tetra	100.0
2ort_A	389	Nitric oxide synthase, inducible; L-arginine monoo	100.0
1mjt_A	347	Nitric-oxide synthase homolog; sanos, NO, NOS, bac	100.0
1d0c_A	444	Bovine endothelial nitric oxide synthase heme DOM;	100.0
2flq_A	375	Nitric oxide synthase; thermostable enzyme, oxidor	100.0
1m7v_A	363	Nitric oxide synthase; pterin oxygenase, bacteria,	100.0

>3n5w_A Nitric oxide synthase; heme enzyme, substrate inhibitor, Zn oxidoreductase, oxidoreductase-oxidoreductase inhibitor COM; HET: HEM XFJ; 1.73A {Rattus norvegicus} SCOP: d.174.1.1 PDB: 2hx3_A* 2hx4_A* 3b3m_A* 3b3n_A* 3b3o_A* 3b3p_A* 3hsn_A* 3hso_A* 3hsp_A* 3jt3_A* 3jt4_A* 3jt5_A* 3jt6_A* 3jt7_A* 3jt8_A* 3jt9_A* 3jta_A* 3n2r_A* 3n5v_A* 1om4_A* ...

Probab=100.00  E-value=6.4e-38  Score=266.79  Aligned_cols=90  Identities=40%  Similarity=0.694  Sum_probs=88.4

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|++++++++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus        63 ~~Fi~q~y~e~~~~~~~~~~~Rl~eV~~eI~~tGTY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~~~  137 (422)
T 3n5w_A           63 KEFLDQYYSSIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV-----FDARDCT  137 (422)
T ss_dssp             HHHHHHHHHHTTCTTSHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEE-----EECTTCC
T ss_pred             HHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhCCccCCHHHHhhcchhhhccCccccCcccccccee-----eecccCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus       138 t~~~m~~al~~Hi~~  152 (422)
T 3n5w_A          138 TAHGMFNYICNHVKY  152 (422)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999986

>3e7m_A Nitric oxide synthase, inducible; NOS, heme, tetrahydrobiopterin, oxido calmodulin-binding, FAD, FMN, iron, metal-binding, NADP, oxidoreductase; HET: HEM H4B AT2; 2.00A {Mus musculus} SCOP: d.174.1.1 PDB: 2y37_A* 1r35_A* 3e67_A* 3e68_A* 3e6l_A* 3e6n_A* 3e6o_A* 3e6t_A* 3e7i_A* 3e65_A* 3e7t_A* 3eai_A* 3ebd_A* 3ebf_A* 3nqs_A* 1m8d_A* 1m8e_A* 1m8h_A* 1m8i_A* 1m9t_A* ...

Probab=100.00  E-value=1.1e-37  Score=265.97  Aligned_cols=90  Identities=41%  Similarity=0.665  Sum_probs=88.4

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|++++++++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus        73 ~~Fi~q~y~e~~~~~~~~~~~Rl~eV~~eI~~tGTY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~~~  147 (433)
T 3e7m_A           73 IEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARNCS  147 (433)
T ss_dssp             HHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEE-----EECTTCC
T ss_pred             HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHhhCCccCCHHHHHhhhHhhhccCCcCcCccccccCee-----eecccCC
Confidence            48999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus       148 t~~~m~~al~~Hi~~  162 (433)
T 3e7m_A          148 TAQEMFQHICRHILY  162 (433)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999986

>2ort_A Nitric oxide synthase, inducible; L-arginine monooxygenase, heme, dimerization, inhibitor, NOS, oxidoreductase; HET: HEM 342; 1.87A {Mus musculus} PDB: 1dd7_A* 2oro_A* 2orq_A* 2orr_A* 2ors_A* 2orp_A* 1nos_A* 1noc_A* 2nos_A* 1df1_A* 1nod_A* 2nod_A* 3nod_A* 3nw2_A* 2bhj_A* 1dwv_A* 1dww_A* 1dwx_A* 1n2n_A* 1qw4_A* ...

Probab=100.00  E-value=1.9e-37  Score=261.80  Aligned_cols=90  Identities=41%  Similarity=0.665  Sum_probs=88.0

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|++++++++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus        25 ~~Fi~~~y~e~~~~~~~~~~~Rl~ev~~eI~~tGTY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~   99 (389)
T 2ort_A           25 IEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARNCS   99 (389)
T ss_dssp             HHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCGGGGGTTCCEE-----EECTTCC
T ss_pred             HHHHHHHHHhcCcccchHHHHHHHHHHHHHHccCCccCCHHHHHHHHHHhhccCCcCcCccccccCee-----eeccCCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus       100 t~~~m~~al~~Hi~~  114 (389)
T 2ort_A          100 TAQEMFQHICRHILY  114 (389)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999986

>1mjt_A Nitric-oxide synthase homolog; sanos, NO, NOS, bacterial, MRSA, seitu, oxidoreductase; HET: SUC HEM NAD; 2.40A {Staphylococcus aureus} SCOP: d.174.1.1

Probab=100.00  E-value=2.6e-37  Score=258.11  Aligned_cols=89  Identities=29%  Similarity=0.481  Sum_probs=86.9

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|+++ ++++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus         8 ~~Fi~~~y~e~~~-~~~~~~~Rl~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~~~   81 (347)
T 1mjt_A            8 QAFIENMYKECHY-ETQIINKRLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLNV-----IDARDVT   81 (347)
T ss_dssp             HHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCTTGGGGGGCEE-----EEETTCC
T ss_pred             HHHHHHHHHhcCC-CchHHHHHHHHHHHHHHccCCCcCCHHHHHHHHHHHhccCccCCCccCCCcCee-----eecccCC
Confidence            4799999999999 788999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus        82 t~~~~~~al~~Hi~~   96 (347)
T 1mjt_A           82 DEASFLSSITYHITQ   96 (347)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999986

>1d0c_A Bovine endothelial nitric oxide synthase heme DOM; alpha-beta fold, oxidoreductase; HET: HEM INE; 1.65A {Bos taurus} SCOP: d.174.1.1 PDB: 1d0o_A* 1d1v_A* 1d1w_A* 1d1x_A* 1d1y_A* 1dm6_A* 1dm7_A* 1dm8_A* 1dmi_A* 1dmj_A* 1dmk_A* 1ed4_A* 1ed5_A* 1ed6_A* 1foi_A* 1foj_A* 1fol_A* 1foo_A* 1fop_A* 1nse_A* ...

Probab=100.00  E-value=7e-37  Score=261.63  Aligned_cols=90  Identities=46%  Similarity=0.723  Sum_probs=88.1

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||.|+++.++++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus        92 ~~Fi~~~y~e~~~~~~~~~~~Rl~ev~~eI~~tGTY~hT~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~  166 (444)
T 1d0c_A           92 RDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV-----FDARDCS  166 (444)
T ss_dssp             HHHHHHHHHHTTCTTSHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHTCTTCTTGGGTTSCEE-----EECTTCC
T ss_pred             HHHHHHHHHhcccccchhHHHHHHHHHHHHHccCCccCCHHHHHhhhHhhhccCCcccCccccccCee-----eecccCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus       167 t~~~m~~al~~Hi~~  181 (444)
T 1d0c_A          167 SAQEMFTYICNHIKY  181 (444)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999986

>2flq_A Nitric oxide synthase; thermostable enzyme, oxidoreductase; HET: ARG HEM; 3.20A {Geobacillus stearothermophilus}

Probab=100.00  E-value=4.2e-37  Score=258.83  Aligned_cols=90  Identities=28%  Similarity=0.395  Sum_probs=87.3

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|+++ ++++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus        21 ~~Fi~~~y~e~~~-~~~~~~~Rl~ev~~eI~~tGTY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~   94 (375)
T 2flq_A           21 EQFIIASYRELGK-SEQEIKRRVNEIRWEVEQTGTYRHTYEELSYGAKMAWRHSNRCIGRLFWQSLHV-----IDAREAV   94 (375)
T ss_dssp             HHHHHHHHHHTTC-CSHHHHHHHHHHHHHHHHHSSCCCCTTTHHHHHHHHHHTCTTCSCCGGGTTCEE-----EEETTCC
T ss_pred             HHHHHHHHHhcCC-CchHHHHHHHHHHHHHHccCCccCCHHHHHHHHHHHhccCccCCCcccCCcCee-----eecccCC
Confidence            4799999999999 789999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhcccc
Q psy8997          86 CYGLIVPKSKREGRQD  101 (118)
Q Consensus        86 t~~~i~~~~~~~~~~~  101 (118)
                      |+++||+++.+|++..
T Consensus        95 t~~~m~~al~~Hi~~A  110 (375)
T 2flq_A           95 TEEEVFSYLFHHIEVA  110 (375)
T ss_dssp             SHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            9999999999999863

>1m7v_A Nitric oxide synthase; pterin oxygenase, bacteria, heme, oxidoreductase; HET: ARG HEM THG; 1.95A {Bacillus subtilis} SCOP: d.174.1.1 PDB: 2fbz_X* 2fc1_A* 1m7z_A* 2fc2_A* 2an0_A* 2amo_A* 2an2_A*

Probab=100.00  E-value=7.5e-37  Score=256.49  Aligned_cols=88  Identities=27%  Similarity=0.439  Sum_probs=85.7

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|+++  +++|..||++|++||++||||+||.+||+||||||||||+|||||+||++|+|     ||+|||+
T Consensus        12 ~~Fi~~~y~e~~~--~~~~~~Rl~ev~~eI~~tGTY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~~~   84 (363)
T 1m7v_A           12 KAFIAECYQELGK--EEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNV-----IDRRDVR   84 (363)
T ss_dssp             HHHHHHHHHHHTC--GGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCSCGGGGGGCEE-----EECTTCC
T ss_pred             HHHHHHHHHhcCC--chHHHHHHHHHHHHHHccCCccCCHHHHHHHHHHHhccCccCCCccCCCcCee-----eeccCCC
Confidence            4799999999999  68999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus        85 t~~~~~~al~~Hi~~   99 (363)
T 1m7v_A           85 TKEDVRDALFHHIET   99 (363)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	118
d1om4a_	418	d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenas	1e-28
d1q2oa_	416	d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenas	1e-28
d3e7ma1	421	d.174.1.1 (A:77-497) Nitric oxide (NO) synthase ox	2e-28
d1mjta_	346	d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenas	8e-27
d1m7va_	363	d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenas	2e-26

>d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 418

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (263), Expect = 1e-28
 Identities = 33/58 (56%), Positives = 45/58 (77%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQ 72
           S+ R  S AH+ R E+V +E+  + TY L +TEL++GAK AWRN++RC+GRIQWSKLQ
Sbjct: 70  SIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQ 127

>d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]} Length = 416

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  104 bits (262), Expect = 1e-28
 Identities = 37/58 (63%), Positives = 45/58 (77%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQ 72
           S+ RS S AH  R ++V+ EVA +GTY L E+ELVFGAK AWRN+ RC+GRIQW KLQ
Sbjct: 73  SIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQ 130

>d3e7ma1 d.174.1.1 (A:77-497) Nitric oxide (NO) synthase oxygenase domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 421

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  104 bits (262), Expect = 2e-28
 Identities = 32/58 (55%), Positives = 39/58 (67%)

Query: 15  SVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQ 72
           S   +    HLAR E V +E+  +GTY LT  EL+F  K+AWRN+ RCIGRIQWS LQ
Sbjct: 71  SFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQ 128

>d1mjta_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Staphylococcus aureus [TaxId: 1280]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Staphylococcus aureus [TaxId: 1280]

 Score = 99.0 bits (247), Expect = 8e-27
 Identities = 24/55 (43%), Positives = 35/55 (63%)

Query: 18 RSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQ 72
            ++     R   ++ E+ ++GTY  TE EL++GAK+AWRNS RCIGR+ W  L 
Sbjct: 18 HYETQIINKRLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLN 72

>d1m7va_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Bacillus subtilis [TaxId: 1423]} Length = 363

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Bacillus subtilis [TaxId: 1423]

 Score = 98.2 bits (245), Expect = 2e-26
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query: 21 SPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQ 72
                R + ++ E+ ++G+Y  T+ EL  GAK+AWRNS RCIGR+ W+ L 
Sbjct: 25 EEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLN 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	118
d3e7ma1	421	Nitric oxide (NO) synthase oxygenase domain {Mouse	100.0
d1om4a_	418	Nitric oxide (NO) synthase oxygenase domain {Rat (	100.0
d1q2oa_	416	Nitric oxide (NO) synthase oxygenase domain {Cow (	100.0
d1mjta_	346	Nitric oxide (NO) synthase oxygenase domain {Staph	100.0
d1m7va_	363	Nitric oxide (NO) synthase oxygenase domain {Bacil	100.0

>d3e7ma1 d.174.1.1 (A:77-497) Nitric oxide (NO) synthase oxygenase domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.1e-39  Score=271.92  Aligned_cols=90  Identities=41%  Similarity=0.665  Sum_probs=88.3

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|++++++++|.+||++|++||++||||+||++||+||||||||||+|||||+||++|||     ||+|+|+
T Consensus        62 ~~Fi~qyy~e~~~~~~~~~~~R~~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRi~W~~L~V-----~D~R~v~  136 (421)
T d3e7ma1          62 IEFINQYYGSFKEAKIEEHLARLEAVTKEIETTGTYQLTLDELIFATKMAWRNAPRCIGRIQWSNLQV-----FDARNCS  136 (421)
T ss_dssp             HHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEE-----EECTTCC
T ss_pred             HHHHHHHHHHhcccCcHHHHHHHHHHHHHHHccccccCCHHHHHHHHHHHHccccccccccccccCee-----eecCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||++|.+|++.
T Consensus       137 t~~~mfeal~~Hi~~  151 (421)
T d3e7ma1         137 TAQEMFQHICRHILY  151 (421)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999985

>d1om4a_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.1e-39  Score=270.65  Aligned_cols=90  Identities=40%  Similarity=0.694  Sum_probs=88.3

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|++++++++|..||++|++||++||||+||++||+||||||||||+|||||+||++|||     ||+|+|+
T Consensus        61 ~~Fi~qyy~e~~~~~~~~~~~Rl~ev~~eI~~tGtY~~T~~EL~~GAk~AWRNs~RCIGRi~W~~L~V-----~D~R~v~  135 (418)
T d1om4a_          61 KEFLDQYYSSIKRFGSKAHMDRLEEVNKEIESTSTYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQV-----FDARDCT  135 (418)
T ss_dssp             HHHHHHHHHHTTCTTSHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHTCTTCTTGGGTTCCEE-----EECTTCC
T ss_pred             HHHHHHHHHhhcccCcHHHHHHHHHHHHHHHccccccCCHHHHHHHHHHHHccccccccccccccCee-----eecCCCC
Confidence            48999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus       136 t~~~mfeal~~Hi~~  150 (418)
T d1om4a_         136 TAHGMFNYICNHVKY  150 (418)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999985

>d1q2oa_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.6e-39  Score=270.36  Aligned_cols=90  Identities=46%  Similarity=0.723  Sum_probs=88.4

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      .+||+|||+|++++++++|..||++|++||++||||+||++||+||||||||||+|||||+||++|||     ||+|+|+
T Consensus        64 ~~Fi~q~y~e~~~~~~~~~~~R~~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGR~~W~~L~V-----~D~R~v~  138 (416)
T d1q2oa_          64 RDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRESELVFGAKQAWRNAPRCVGRIQWGKLQV-----FDARDCS  138 (416)
T ss_dssp             HHHHHHHHHHTTCTTSHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHCTTCTTGGGTTCCEE-----EECTTCC
T ss_pred             HHHHHHHHHhhCccCCHHHHHHHHHHHHHHHccccccCCHHHHHHHHHHHHccccccccccccccCee-----eecCCCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus       139 t~~~mfeal~~Hi~~  153 (416)
T d1q2oa_         139 SAQEMFTYICNHIKY  153 (416)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999985

>d1mjta_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=4.9e-38  Score=260.42  Aligned_cols=89  Identities=29%  Similarity=0.471  Sum_probs=86.3

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|++++ ++++..||.+|++||++||||+||++||+||||||||||+|||||+||++|||     ||+|+|+
T Consensus         7 ~~Fi~q~y~e~~~~-~~~~~~R~~eV~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~   80 (346)
T d1mjta_           7 QAFIENMYKECHYE-TQIINKRLHDIELEIKETGTYTHTEEELIYGAKMAWRNSNRCIGRLFWDSLNV-----IDARDVT   80 (346)
T ss_dssp             HHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCTTGGGGGGCEE-----EEETTCC
T ss_pred             HHHHHHHHHHcCCC-hHHHHHHHHHHHHHHHccCCccCCHHHHHHHHHHHHccccccccccccCcCee-----eecCCCC
Confidence            58999999999985 78999999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus        81 t~~~mfeal~~Hl~~   95 (346)
T d1mjta_          81 DEASFLSSITYHITQ   95 (346)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999985

>d1m7va_ d.174.1.1 (A:) Nitric oxide (NO) synthase oxygenase domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Nitric oxide (NO) synthase oxygenase domain
superfamily: Nitric oxide (NO) synthase oxygenase domain
family: Nitric oxide (NO) synthase oxygenase domain
domain: Nitric oxide (NO) synthase oxygenase domain
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=9.1e-38  Score=260.06  Aligned_cols=88  Identities=27%  Similarity=0.439  Sum_probs=85.1

Q ss_pred             hchhHHHhhcCCCCCcHHHHHHHHHHHHHHHhhccccccHHHHhhhhhhhhhccCcccccccccceeecccccccCCCCC
Q psy8997           6 CDTFPIFGISVPRSDSPAHLARWEQVQREVAQSGTYDLTETELVFGAKLAWRNSARCIGRIQWSKLQTLEWKRFDRGNCN   85 (118)
Q Consensus         6 ~dfl~qyY~s~kr~~s~a~~~Rl~eV~~eI~~tGtY~~T~eEL~fGAklAWRNS~RCIGRi~W~~LqV~~~~~~D~R~v~   85 (118)
                      -+||+|||+|+++  ++++..||++|+++|++||||+||++||+||||||||||+|||||+||++|||     ||+|+|+
T Consensus        12 ~~Fi~~~y~e~~~--~~~~~~Rl~ev~~eI~~tGtY~~T~eEL~~GAk~AWRNs~RCIGRl~W~~L~V-----~D~R~v~   84 (363)
T d1m7va_          12 KAFIAECYQELGK--EEEVKDRLDSIKSEIDRTGSYVHTKEELEHGAKMAWRNSNRCIGRLFWNSLNV-----IDRRDVR   84 (363)
T ss_dssp             HHHHHHHHHHHTC--GGGHHHHHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTCTTCSCGGGGGGCEE-----EECTTCC
T ss_pred             HHHHHHHHHhcCc--chhHHHHHHHHHHHHHccCCccCCHHHHHHHHHHHHccccccccccccCcCee-----eeccCCC
Confidence            4899999999997  57899999999999999999999999999999999999999999999999999     9999999


Q ss_pred             chhhhhHHHHhhccc
Q psy8997          86 CYGLIVPKSKREGRQ  100 (118)
Q Consensus        86 t~~~i~~~~~~~~~~  100 (118)
                      |+++||+++.+|++.
T Consensus        85 t~~~m~eal~~Hl~~   99 (363)
T d1m7va_          85 TKEDVRDALFHHIET   99 (363)
T ss_dssp             SHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999975