Psyllid ID: psy9052

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350------
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATEEDNEGEVQNPRSSGGGNGRLFQNIDTALLSSREELDEVTSPSMRNVMSNSREELGDLNERTTSNLDLVDGNHQDIDKLRSLLPSYRPAPDYETAIQQKYNASEQQMYSSQPEIHSFPDVTQHYGHRNVLHTYSTPDLDKIKQNE
ccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccEEcccccccEEEEEEEccEEEEEccccccEEcccccccEEEcccEEEEEEccccccEEEEEcccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccc
ccccccHHHcccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEcccEEEEEEcccccccccccEEEEEEEcccEEEEEccccccEEcEccccHHHHHHHHHHHHHcccEEEcccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccHHHHccccccHccccccccccccccccccccccccccccccc
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQaefgnynserhtleYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQldgygqetflvkdeHGLETILGVTLKGIIvsgtnsskfYKWAEIANVLNhkknfgietsnaddhivnfvfpdvesaKYVFRMCVHQHTFymtyeateednegevqnprssgggngrlfQNIDTALLSSreeldevtspsmrnvmSNSReelgdlnerttsnldlvdgnhqdIDKLRsllpsyrpapdyETAIQQKYNAseqqmyssqpeihsfpdvtqhyghrnvlhtystpdldkikqne
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATEEDNEGEVQnprssgggngRLFQNIDTALLSSREeldevtspsmrnvmsnsreelgdlnerttsnldlvdgnhqDIDKLRSLLPSYRPAPDYETAIQQKYNASEQQMYSSQPEIHSFPDVTQHYGHRNVLhtystpdldkikqne
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATEEDNEGEVQNPRSSGGGNGRLFQNIDTALLSSREELDEVTSPSMRNVMSNSREELGDLNERTTSNLDLVDGNHQDIDKLRSLLPSYRPAPDYETAIQQKYNASEQQMYSSQPEIHSFPDVTQHYGHRNVLHTYSTPDLDKIKQNE
*YYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYE***************************************************************************************************************************QHYGHRNVLHT*************
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFY*******************************************************************************************************************************************************
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEA***************GGGNGRLFQNIDTALLSSRE*********MRNVMSNSREELGDLNERTTSNLDLVDGNHQDIDKLRSLLPSYRPAPDYETAIQQKYNA********QPEIHSFPDVTQHYGHRNVLHTYSTPDLDKIKQNE
MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATEEDNEGEVQNPRSSGGGNGRL**NIDTALLSSREELDE****************************************************************S**Q*YSSQ***HSFPDVTQHYGHRNVLHTYST**********
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MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADDHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATEEDNEGEVQNPRSSGGGNGRLFQNIDTALLSSREELDEVTSPSMRNVMSNSREELGDLNERTTSNLDLVDGNHQDIDKLRSLLPSYRPAPDYETAIQQKYNASEQQMYSSQPEIHSFPDVTQHYGHRNVLHTYSTPDLDKIKQNE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query356 2.2.26 [Sep-21-2011]
Q15678 1187 Tyrosine-protein phosphat yes N/A 0.938 0.281 0.300 3e-36
Q16825 1174 Tyrosine-protein phosphat no N/A 0.564 0.171 0.367 1e-35
Q62136 1176 Tyrosine-protein phosphat yes N/A 0.856 0.259 0.286 8e-35
Q62728 1175 Tyrosine-protein phosphat yes N/A 0.564 0.171 0.357 3e-34
Q62130 1189 Tyrosine-protein phosphat yes N/A 0.592 0.177 0.371 4e-34
A2ALK8 913 Tyrosine-protein phosphat no N/A 0.707 0.276 0.306 1e-26
P26045 913 Tyrosine-protein phosphat no N/A 0.547 0.213 0.354 1e-26
Q9H4G0 881 Band 4.1-like protein 1 O no N/A 0.547 0.221 0.277 2e-24
Q9Z2H5 879 Band 4.1-like protein 1 O no N/A 0.547 0.221 0.277 3e-24
Q6Q7P4 810 Protein 4.1 OS=Canis fami no N/A 0.547 0.240 0.277 9e-24
>sp|Q15678|PTN14_HUMAN Tyrosine-protein phosphatase non-receptor type 14 OS=Homo sapiens GN=PTPN14 PE=1 SV=2 Back     alignment and function desciption
 Score =  152 bits (385), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 189/412 (45%), Gaps = 78/412 (18%)

Query: 1   MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHT 60
           M+YV  +S +  E TRY  +LQ+K D++EGR++C LD  + LA   +QA+FG+YN +  +
Sbjct: 100 MFYVPNVSWLQQEATRYQYYLQVKKDVLEGRLRCTLDQVIRLAGLAVQADFGDYN-QFDS 158

Query: 61  LEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYG 120
            ++L+++ LFP DL       +LE LT  V Q+H A  G+    AE  YI   ++LDG+G
Sbjct: 159 QDFLREYVLFPMDLALE--EAVLEELTQKVAQEHKAHSGILPAEAELMYINEVERLDGFG 216

Query: 121 QETFLVKDEHGLETILGVTLKGIIVSGT--NSSKFYKWAEIANVLNHKKNFGIETSNADD 178
           QE F VKD HG    LG+   GI V       +  Y+W ++ N+ ++K    +E  N ++
Sbjct: 217 QEIFPVKDNHGNCVHLGIFFMGIFVRNRIGRQAVIYRWNDMGNITHNKSTILVELINKEE 276

Query: 179 HIVNFVFPDVESAKYVFRMCVHQHTFYMTYE-ATEEDNEGEV--QNPRSSGGGNGR---- 231
             + F   D+E+AKY+ R+   +H FY   +  TE+ N      + P  S     R    
Sbjct: 277 TAL-FHTDDIENAKYISRLFATRHKFYKQNKICTEQSNSPPPIRRQPTWSRSSLPRQQPY 335

Query: 232 ----------------------LFQNIDTAL-LSSREELD------EVTSPSMRNVMS-- 260
                                 +F   + AL  +S   LD       VT+ S+ +V S  
Sbjct: 336 ILPPVHVQCGEHYSETHTSQDSIFHGNEEALYCNSHNSLDLNYLNGTVTNGSVCSVHSVN 395

Query: 261 --NSREELGDLNERTTSNLDLVDGNHQDIDKLRS------LLPSYRPAPDYETAIQQ--- 309
             N  +     +   +SNL +   +    D + S      ++PSYRP PDYET ++Q   
Sbjct: 396 SLNCSQSFIQASP-VSSNLSIPGSDIMRADYIPSHRHSAIIVPSYRPTPDYETVMRQMKR 454

Query: 310 ---------------------KYNASEQQMYSSQPEIHSFPDVTQHYGHRNV 340
                                 YN  E  +Y SQPE+      T  YG + V
Sbjct: 455 GILHTDSQSQSLRNLNIINTHAYNQPEDLVY-SQPEMRERHPYTVPYGPQGV 505
Protein tyrosine phosphatase which may play a role in the regulation of lymphangiogenesis.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 4EC: 8
>sp|Q16825|PTN21_HUMAN Tyrosine-protein phosphatase non-receptor type 21 OS=Homo sapiens GN=PTPN21 PE=1 SV=2 Back     alignment and function description
>sp|Q62136|PTN21_MOUSE Tyrosine-protein phosphatase non-receptor type 21 OS=Mus musculus GN=Ptpn21 PE=1 SV=1 Back     alignment and function description
>sp|Q62728|PTN21_RAT Tyrosine-protein phosphatase non-receptor type 21 OS=Rattus norvegicus GN=Ptpn21 PE=2 SV=1 Back     alignment and function description
>sp|Q62130|PTN14_MOUSE Tyrosine-protein phosphatase non-receptor type 14 OS=Mus musculus GN=Ptpn14 PE=1 SV=2 Back     alignment and function description
>sp|A2ALK8|PTN3_MOUSE Tyrosine-protein phosphatase non-receptor type 3 OS=Mus musculus GN=Ptpn3 PE=2 SV=1 Back     alignment and function description
>sp|P26045|PTN3_HUMAN Tyrosine-protein phosphatase non-receptor type 3 OS=Homo sapiens GN=PTPN3 PE=1 SV=2 Back     alignment and function description
>sp|Q9H4G0|E41L1_HUMAN Band 4.1-like protein 1 OS=Homo sapiens GN=EPB41L1 PE=1 SV=2 Back     alignment and function description
>sp|Q9Z2H5|E41L1_MOUSE Band 4.1-like protein 1 OS=Mus musculus GN=Epb41l1 PE=1 SV=2 Back     alignment and function description
>sp|Q6Q7P4|41_CANFA Protein 4.1 OS=Canis familiaris GN=EPB41 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
242021654 1096 conserved hypothetical protein [Pediculu 0.966 0.313 0.463 3e-82
328706134 1050 PREDICTED: tyrosine-protein phosphatase 0.932 0.316 0.461 4e-76
383849423431 PREDICTED: tyrosine-protein phosphatase 0.862 0.712 0.439 8e-68
357627466 1116 hypothetical protein KGM_05871 [Danaus p 0.904 0.288 0.433 1e-67
110756867429 PREDICTED: tyrosine-protein phosphatase 0.856 0.710 0.439 4e-67
340714387431 PREDICTED: tyrosine-protein phosphatase 0.862 0.712 0.436 4e-67
350417390431 PREDICTED: tyrosine-protein phosphatase 0.862 0.712 0.436 5e-67
345484109430 PREDICTED: tyrosine-protein phosphatase 0.853 0.706 0.429 5e-67
340714389445 PREDICTED: tyrosine-protein phosphatase 0.862 0.689 0.436 6e-67
332029135425 Tyrosine-protein phosphatase non-recepto 0.839 0.703 0.421 4e-65
>gi|242021654|ref|XP_002431259.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516513|gb|EEB18521.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  311 bits (797), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 184/397 (46%), Positives = 243/397 (61%), Gaps = 53/397 (13%)

Query: 1   MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHT 60
           MYYV+ +SLI DE TRYH FLQ+K D+IEGRIQC +++AV+LA++ MQAEFGN++ ERHT
Sbjct: 100 MYYVNNVSLIQDETTRYHYFLQIKKDVIEGRIQCRVEEAVLLATFAMQAEFGNHDHERHT 159

Query: 61  LEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYG 120
            EYLKDF +FP+ ++E+ H+     L +AV+QQH+ L GL QG A+E YIL A+QLDGYG
Sbjct: 160 AEYLKDFVVFPQHIIEHAHH---LDLYEAVVQQHAGLAGLPQGVAKERYILVAKQLDGYG 216

Query: 121 QETFLVKDEHGLETILGVTLKGIIVSGTNS--SKFYKWAEIANVLNHKKNFGIETSNADD 178
           QETFL +DE     ++GV+L GIIV   N+  +KFY+W +I+NV+NHKK F IE    +D
Sbjct: 217 QETFLARDEQRNPALVGVSLNGIIVGQENNTCTKFYQWKDISNVINHKKQFIIECQCPED 276

Query: 179 HIVNFVFPDVESAKYVFRMCVHQHTFYMTYEATEED--NEGEVQNPRSSGGGNGRLFQNI 236
           + V F F D E AKYV+++CV QHTF M  + + E+  N  E +NP  +   + + F N+
Sbjct: 277 N-VQFEFGDPELAKYVWKLCVLQHTFCMQNDQSSENAINRPE-RNPLQTSNDHVQ-FNNL 333

Query: 237 DTALLSSREELDEVTSPSMRNVMSNSREELGDLNER--TTSNLDLVDGNHQDIDKLRSLL 294
                 SR  +D +      + M  S      + +R  +TS LDL   +  D D+LRSLL
Sbjct: 334 FKQTAESR-LVDSLNDLGRNDHMFRSSSLTPGVGQRAQSTSYLDL--SSQPDADRLRSLL 390

Query: 295 PSYRPAPDYETAIQQKY----------NASEQQMYSSQPEIH-----------SFPDVTQ 333
           PSYRPAPDYETAIQ KY          N     +YSSQPEIH            +PDVTQ
Sbjct: 391 PSYRPAPDYETAIQHKYIRQAANISRSNPQVGLLYSSQPEIHQTHIHENVGGYCYPDVTQ 450

Query: 334 -----------------HYGHRNVLHTYSTPDLDKIK 353
                            H      +HTYSTPDLD ++
Sbjct: 451 VKRMYVDDDQQRMVKANHGPPGMTIHTYSTPDLDNLE 487

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328706134|ref|XP_001951888.2| PREDICTED: tyrosine-protein phosphatase non-receptor type 21-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|383849423|ref|XP_003700344.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 14-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|357627466|gb|EHJ77146.1| hypothetical protein KGM_05871 [Danaus plexippus] Back     alignment and taxonomy information
>gi|110756867|ref|XP_392377.2| PREDICTED: tyrosine-protein phosphatase non-receptor type 14 [Apis mellifera] Back     alignment and taxonomy information
>gi|340714387|ref|XP_003395710.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 14-like isoform 1 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350417390|ref|XP_003491399.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 14-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|345484109|ref|XP_003424949.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 14-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|340714389|ref|XP_003395711.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 14-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information
>gi|332029135|gb|EGI69146.1| Tyrosine-protein phosphatase non-receptor type 14 [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query356
FB|FBgn0031799 1252 Pez "Pez" [Drosophila melanoga 0.581 0.165 0.369 3.2e-45
UNIPROTKB|F1PU81 1187 PTPN14 "Uncharacterized protei 0.592 0.177 0.371 8.2e-40
UNIPROTKB|Q15678 1187 PTPN14 "Tyrosine-protein phosp 0.592 0.177 0.371 2.2e-39
UNIPROTKB|F1NUW7 1170 PTPN21 "Uncharacterized protei 0.564 0.171 0.391 2.6e-39
UNIPROTKB|E1C5H0 1185 PTPN21 "Uncharacterized protei 0.564 0.169 0.391 2.8e-39
UNIPROTKB|F1NVR5 1193 PTPN14 "Uncharacterized protei 0.589 0.176 0.351 6e-39
UNIPROTKB|E1BEZ8 1190 PTPN14 "Uncharacterized protei 0.592 0.177 0.362 9.7e-39
UNIPROTKB|I3LKD1 444 I3LKD1 "Uncharacterized protei 0.550 0.441 0.369 1.3e-38
MGI|MGI:102467 1189 Ptpn14 "protein tyrosine phosp 0.592 0.177 0.371 2.6e-38
UNIPROTKB|D4A088 1189 Ptpn14 "Protein Ptpn14" [Rattu 0.592 0.177 0.371 6.8e-38
FB|FBgn0031799 Pez "Pez" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 406 (148.0 bits), Expect = 3.2e-45, Sum P(2) = 3.2e-45
 Identities = 78/211 (36%), Positives = 130/211 (61%)

Query:     2 YYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTL 61
             Y  +G+  ++DE TR++ FLQLK+DI EGRI C++  A++LA YC QAE+ +Y  ++ + 
Sbjct:   107 YVTTGVRHLSDEATRFYYFLQLKSDIYEGRIACDIRTAILLALYCRQAEYDSYQGDKQSK 166

Query:    62 EYLKDFALFPKDLVENGHN-GLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYG 120
             +YLK   + P+++    ++  +LE L   V+QQ + +  LSQ  AEE YI   QQL+GYG
Sbjct:   167 DYLKKSLVLPRNMQGLANDDSMLEGLIVEVLQQQAGIAHLSQSQAEEMYIQCCQQLEGYG 226

Query:   121 QETFLVKDEHGLETILGVTLKGIIVSGTNSSKFYKWAEIANVLNHKKNFGIETSNADD-- 178
             +E F  KD  G + +LG+ + G++V+  N  +++ W E   V   K+   IE +  D   
Sbjct:   227 EERFAAKDTLGNDLLLGLAINGMVVNADNGRQYFPWKEFHTVTIDKRTIKIEQNKLDGGG 286

Query:   179 HIV-NFVFPDVESAKYVFRMCVHQHTFYMTY 208
              IV +F+F + ++A+Y +++ + QH F+  Y
Sbjct:   287 SIVGSFIFSEADTARYFWKLTISQHKFFKRY 317
GO:0004725 "protein tyrosine phosphatase activity" evidence=ISS;NAS
GO:0006470 "protein dephosphorylation" evidence=IEA;NAS
GO:0008092 "cytoskeletal protein binding" evidence=ISS
GO:0005856 "cytoskeleton" evidence=IEA
GO:2000647 "negative regulation of stem cell proliferation" evidence=IMP
GO:0045177 "apical part of cell" evidence=IDA
GO:0035331 "negative regulation of hippo signaling cascade" evidence=IGI
GO:0005938 "cell cortex" evidence=IDA
UNIPROTKB|F1PU81 PTPN14 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q15678 PTPN14 "Tyrosine-protein phosphatase non-receptor type 14" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NUW7 PTPN21 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C5H0 PTPN21 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NVR5 PTPN14 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BEZ8 PTPN14 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|I3LKD1 I3LKD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:102467 Ptpn14 "protein tyrosine phosphatase, non-receptor type 14" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|D4A088 Ptpn14 "Protein Ptpn14" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
pfam00373113 pfam00373, FERM_M, FERM central domain 1e-27
cd13188111 cd13188, FERM_C_PTPN14_PTPN21, Protein tyrosine ph 7e-27
smart00295201 smart00295, B41, Band 4 5e-22
pfam0938090 pfam09380, FERM_C, FERM C-terminal PH-like domain 1e-18
cd0083691 cd00836, FERM_C-lobe, FERM domain C-lobe 2e-17
cd13189123 cd13189, FERM_C_PTPN4_PTPN3_like, Protein tyrosine 4e-15
cd13195131 cd13195, FERM_C_MYLIP_IDOL, The E3 ubiquitin ligas 1e-11
cd13192105 cd13192, FERM_C_FRMD3_FRMD5, FERM domain-containin 1e-10
cd13186111 cd13186, FERM_C_NBL4_NBL5, Novel band 4 4e-10
cd13187124 cd13187, FERM_C_PTPH13, Protein tyrosine phosphata 2e-09
cd1319497 cd13194, FERM_C_ERM, ERM family FERM domain C-lobe 5e-08
cd13184113 cd13184, FERM_C_4_1_family, Protein 4 1e-07
cd13191115 cd13191, FERM_C_FRMD4A_FRMD4B, FERM domain-contain 0.002
>gnl|CDD|215882 pfam00373, FERM_M, FERM central domain Back     alignment and domain information 
 Score =  104 bits (261), Expect = 1e-27
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 4/116 (3%)

Query: 10  ITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDF-A 68
           + DE+TR   +LQLK DI+EGR+ C+ ++A++LA+  +QAEFG+YN E+H+  YLK+   
Sbjct: 1   LQDEVTRELLYLQLKRDILEGRLPCSEEEALLLAALALQAEFGDYNPEKHSSSYLKELEY 60

Query: 69  LFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETF 124
             P  L++       + L   +++ H  L GLS   A+  Y+  AQ L  YG   F
Sbjct: 61  FLPSRLIKKEK---SKELEKRILEAHKNLRGLSPAEAKLKYLQIAQSLPTYGVTFF 113

This domain is the central structural domain of the FERM domain. Length = 113
>gnl|CDD|241342 cd13188, FERM_C_PTPN14_PTPN21, Protein tyrosine phosphatase non-receptor proteins 14 and 21 (PTPN14 and 21) FERM domain Back     alignment and domain information
>gnl|CDD|214604 smart00295, B41, Band 4 Back     alignment and domain information
>gnl|CDD|220216 pfam09380, FERM_C, FERM C-terminal PH-like domain Back     alignment and domain information
>gnl|CDD|241233 cd00836, FERM_C-lobe, FERM domain C-lobe Back     alignment and domain information
>gnl|CDD|241343 cd13189, FERM_C_PTPN4_PTPN3_like, Protein tyrosine phosphatase non-receptor proteins 3 and 4 (PTPN4 and PTPN3) FERM domain C-lobe Back     alignment and domain information
>gnl|CDD|241349 cd13195, FERM_C_MYLIP_IDOL, The E3 ubiquitin ligase myosin regulatory light chain-interacting protein (MYLIP; also called inducible degrader of the LDL receptor, IDOL) FERM domain C-lobe Back     alignment and domain information
>gnl|CDD|241346 cd13192, FERM_C_FRMD3_FRMD5, FERM domain-containing protein 3 and 5 FERM (FRMD3 and 5) domain C-lobe Back     alignment and domain information
>gnl|CDD|241340 cd13186, FERM_C_NBL4_NBL5, Novel band 4 Back     alignment and domain information
>gnl|CDD|241341 cd13187, FERM_C_PTPH13, Protein tyrosine phosphatase non-receptor 13 (PTPH13) FERM domain C-lobe Back     alignment and domain information
>gnl|CDD|241348 cd13194, FERM_C_ERM, ERM family FERM domain C-lobe/F3 Back     alignment and domain information
>gnl|CDD|241338 cd13184, FERM_C_4_1_family, Protein 4 Back     alignment and domain information
>gnl|CDD|241345 cd13191, FERM_C_FRMD4A_FRMD4B, FERM domain-containing protein 4A and 4B (FRMD4A and 4B) FERM domain C-lobe Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 356
KOG3530|consensus 616 100.0
KOG0792|consensus 1144 100.0
KOG3527|consensus 975 100.0
KOG3529|consensus 596 99.96
PF00373126 FERM_M: FERM central domain; InterPro: IPR019748 T 99.92
cd0083692 FERM_C FERM_C domain. The FERM_C domain is the thi 99.9
KOG3531|consensus 1036 99.87
smart00295207 B41 Band 4.1 homologues. Also known as ezrin/radix 99.83
PF0938090 FERM_C: FERM C-terminal PH-like domain; InterPro: 99.83
KOG0248|consensus936 99.68
KOG4261|consensus 1003 99.6
KOG4371|consensus 1332 99.58
KOG3552|consensus 1298 98.61
KOG4257|consensus 974 98.18
KOG3727|consensus664 98.06
KOG4371|consensus 1332 97.93
cd0043585 ACBP Acyl CoA binding protein (ACBP) binds thiol e 97.49
KOG3531|consensus 1036 97.34
PF0088787 ACBP: Acyl CoA binding protein; InterPro: IPR00058 97.17
PTZ0045890 acyl CoA binding protein; Provisional 96.12
KOG3784|consensus407 95.64
KOG4335|consensus558 95.52
COG428187 ACB Acyl-CoA-binding protein [Lipid metabolism] 94.99
KOG4335|consensus558 94.57
KOG0817|consensus142 92.21
PF02174100 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 86.1
cd00934123 PTB Phosphotyrosine-binding (PTB) domain. Phosphot 81.89
cd01203104 DOK_PTB Downstream of tyrosine kinase (DOK) Phosph 80.12
smart00462134 PTB Phosphotyrosine-binding domain, phosphotyrosin 80.11
PF1431762 YcxB: YcxB-like protein 80.08
>KOG3530|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.7e-49  Score=402.08  Aligned_cols=202  Identities=33%  Similarity=0.588  Sum_probs=193.0

Q ss_pred             CcccCCCCCCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCc
Q psy9052           1 MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHN   80 (356)
Q Consensus         1 kFY~~d~~~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~   80 (356)
                      |||+.||..|.+|.|||+||||||+||++|||+|+.++|++||||++|+|+|||+++.|+.+|+.+.+|+|.+.      
T Consensus        89 KfY~sdP~~Lree~tRYqfflQlKqDll~GRL~Cp~~~AaeLaAl~lQsELGDYn~~~Ht~~yVSefRf~p~Qt------  162 (616)
T KOG3530|consen   89 KFYPSDPNNLREENTRYQFFLQLKQDLLSGRLYCPFETAAELAALILQSELGDYNEEEHTGGYVSEFRFLPNQT------  162 (616)
T ss_pred             EeccCChhhhhchhhHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHhcCCChhhccccceeeeEeccccc------
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999875      


Q ss_pred             chHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCccceeeeecccc
Q psy9052          81 GLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGTNSSKFYKWAEI  159 (356)
Q Consensus        81 ~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~~~~~~f~W~~I  159 (356)
                         |.++.+|++.||+++|++|++||..||+.|+.|++|||++|.|++++|.+..||+++.||.| .+..++..|-|++|
T Consensus       163 ---e~LE~~I~e~hK~~rGqspaqAElnyLnkAkwLemYGVDmH~V~g~dg~ey~LGLTptGIlvf~g~~kig~f~WpkI  239 (616)
T KOG3530|consen  163 ---EELEERIFELHKELRGQSPAQAELNYLNKAKWLEMYGVDMHPVKGHDGSEYYLGLTPTGILVFEGKKKIGLFFWPKI  239 (616)
T ss_pred             ---HHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhhhhhccccceeeecCCCceeEeeccCceEEEEECCceeeEEecchh
Confidence               67899999999999999999999999999999999999999999999999999999999999 88899999999999


Q ss_pred             cceeccCceEEEEEcCCC------CceEEEEeCCHHHHHHHHHHHHHhhHHhhcCccc
Q psy9052         160 ANVLNHKKNFGIETSNAD------DHIVNFVFPDVESAKYVFRMCVHQHTFYMTYEAT  211 (356)
Q Consensus       160 ~~lsf~~k~F~I~~~~~~------~~~~~F~~~s~~~AK~Lwklcie~H~Ffr~~~~~  211 (356)
                      .++.|++++|++++...+      +++..|.+++.++||+|||||+|||+|||+....
T Consensus       240 ~KvdFk~kk~~L~v~edd~~~~~q~hTf~F~~~~~~AcKhLWKCavEhhaFFRl~~p~  297 (616)
T KOG3530|consen  240 TKVDFKGKKFTLVVSEDDDQGREQEHTFVFRLPSPKACKHLWKCAVEHHAFFRLRCPV  297 (616)
T ss_pred             eEeeccCcEEEEEEeeccccCCcccceEEEeCCCcchhHHHHHHhhhccceEeccCCc
Confidence            999999999999987543      2478999999999999999999999999998773

>KOG0792|consensus Back     alignment and domain information
>KOG3527|consensus Back     alignment and domain information
>KOG3529|consensus Back     alignment and domain information
>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4 Back     alignment and domain information
>cd00836 FERM_C FERM_C domain Back     alignment and domain information
>KOG3531|consensus Back     alignment and domain information
>smart00295 B41 Band 4 Back     alignment and domain information
>PF09380 FERM_C: FERM C-terminal PH-like domain; InterPro: IPR018980 The FERM domain (F for 4 Back     alignment and domain information
>KOG0248|consensus Back     alignment and domain information
>KOG4261|consensus Back     alignment and domain information
>KOG4371|consensus Back     alignment and domain information
>KOG3552|consensus Back     alignment and domain information
>KOG4257|consensus Back     alignment and domain information
>KOG3727|consensus Back     alignment and domain information
>KOG4371|consensus Back     alignment and domain information
>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity Back     alignment and domain information
>KOG3531|consensus Back     alignment and domain information
>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters [] Back     alignment and domain information
>PTZ00458 acyl CoA binding protein; Provisional Back     alignment and domain information
>KOG3784|consensus Back     alignment and domain information
>KOG4335|consensus Back     alignment and domain information
>COG4281 ACB Acyl-CoA-binding protein [Lipid metabolism] Back     alignment and domain information
>KOG4335|consensus Back     alignment and domain information
>KOG0817|consensus Back     alignment and domain information
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain Back     alignment and domain information
>cd00934 PTB Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain Back     alignment and domain information
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain Back     alignment and domain information
>PF14317 YcxB: YcxB-like protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
3qij_A296 Primitive-Monoclinic Crystal Structure Of The Ferm 2e-23
1gg3_A279 Crystal Structure Of The Protein 4.1r Membrane Bind 2e-23
2he7_A283 Ferm Domain Of Epb41l3 (Dal-1) Length = 283 5e-23
3bin_A283 Structure Of The Dal-1 And Tslc1 (372-383) Complex 5e-23
2emt_A322 Crystal Structure Analysis Of The Radixin Ferm Doma 4e-19
2zpy_A312 Crystal Structure Of The Mouse Radxin Ferm Domain C 4e-19
2d10_A312 Crystal Structure Of The Radixin Ferm Domain Comple 5e-19
2d2q_A310 Crystal Structure Of The Dimerized Radixin Ferm Dom 5e-19
1j19_A317 Crystal Structure Of The Radxin Ferm Domain Complex 5e-19
1gc6_A297 Crystal Structure Of The Radixin Ferm Domain Comple 6e-19
1ni2_A296 Structure Of The Active Ferm Domain Of Ezrin Length 2e-18
3u8z_A300 Human Merlin Ferm Domain Length = 300 9e-18
1h4r_A314 Crystal Structure Of The Ferm Domain Of Merlin, The 9e-18
1h4r_B314 Crystal Structure Of The Ferm Domain Of Merlin, The 9e-18
1isn_A323 Crystal Structure Of Merlin Ferm Domain Length = 32 1e-17
1e5w_A346 Structure Of Isolated Ferm Domain And First Long He 3e-17
1sgh_A297 Moesin Ferm Domain Bound To Ebp50 C-Terminal Peptid 5e-17
1ef1_A294 Crystal Structure Of The Moesin Ferm DomainTAIL DOM 8e-16
2i1j_A 575 Moesin From Spodoptera Frugiperda At 2.1 Angstroms 3e-14
2rq1_A109 Solution Structure Of The 4.1r Ferm Alpha Lobe Doma 2e-11
4f7g_A222 Crystal Structure Of Talin Autoinhibition Complex L 4e-06
1y19_B202 Structural Basis For Phosphatidylinositol Phosphate 4e-06
3ivf_A371 Crystal Structure Of The Talin Head Ferm Domain Len 5e-06
1miz_B201 Crystal Structure Of An Integrin Beta3-Talin Chimer 7e-06
1mix_A206 Crystal Structure Of A Ferm Domain Of Talin Length 8e-06
1mk7_B192 Crystal Structure Of An Integrin Beta3-Talin Chimer 1e-05
3g9w_A223 Crystal Structure Of Talin2 F2-f3 In Complex With T 4e-04
>pdb|3QIJ|A Chain A, Primitive-Monoclinic Crystal Structure Of The Ferm Domain Of Protein 4.1r Length = 296 Back     alignment and structure 
Iteration: 1

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 2   YYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTL 61
           +Y    + +T+++TRY+  LQL+ DI+ GR+ C+     +L SY +Q+E G+Y+ E H +
Sbjct: 96  FYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHGV 155
Query: 62  EYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQ 121
           +Y+ DF L P    E         L + V++ H +   ++   A+  ++  A++L  YG 
Sbjct: 156 DYVSDFKLAPNQTKE---------LEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGV 206
Query: 122 ETFLVKDEHGLETILGVTLKGIIVSGTN-SSKFYKWAEIANVLNHKKNFGIETSNAD--- 177
           +    KD  G++ ILGV   G++V         + W ++  +   + +F I+    +   
Sbjct: 207 DLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQEQ 266
Query: 178 -DHIVNFVFPDVESAKYVFRMCVHQHTFY 205
            +  + F  P   +AK ++++CV  HTF+
Sbjct: 267 YESTIGFKLPSYRAAKKLWKVCVEHHTFF 295
>pdb|1GG3|A Chain A, Crystal Structure Of The Protein 4.1r Membrane Binding Domain Length = 279 Back     alignment and structure
>pdb|2HE7|A Chain A, Ferm Domain Of Epb41l3 (Dal-1) Length = 283 Back     alignment and structure
>pdb|3BIN|A Chain A, Structure Of The Dal-1 And Tslc1 (372-383) Complex Length = 283 Back     alignment and structure
>pdb|2EMT|A Chain A, Crystal Structure Analysis Of The Radixin Ferm Domain Complexed With Adhesion Molecule Psgl-1 Length = 322 Back     alignment and structure
>pdb|2ZPY|A Chain A, Crystal Structure Of The Mouse Radxin Ferm Domain Complexed With The Mouse Cd44 Cytoplasmic Peptide Length = 312 Back     alignment and structure
>pdb|2D10|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed With The Nherf-1 C-Terminal Tail Peptide Length = 312 Back     alignment and structure
>pdb|2D2Q|A Chain A, Crystal Structure Of The Dimerized Radixin Ferm Domain Length = 310 Back     alignment and structure
>pdb|1J19|A Chain A, Crystal Structure Of The Radxin Ferm Domain Complexed With The Icam-2 Cytoplasmic Peptide Length = 317 Back     alignment and structure
>pdb|1GC6|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed With Inositol-(1,4,5)-Triphosphate Length = 297 Back     alignment and structure
>pdb|1NI2|A Chain A, Structure Of The Active Ferm Domain Of Ezrin Length = 296 Back     alignment and structure
>pdb|3U8Z|A Chain A, Human Merlin Ferm Domain Length = 300 Back     alignment and structure
>pdb|1H4R|A Chain A, Crystal Structure Of The Ferm Domain Of Merlin, The Neurofibromatosis 2 Tumor Suppressor Protein Length = 314 Back     alignment and structure
>pdb|1H4R|B Chain B, Crystal Structure Of The Ferm Domain Of Merlin, The Neurofibromatosis 2 Tumor Suppressor Protein Length = 314 Back     alignment and structure
>pdb|1ISN|A Chain A, Crystal Structure Of Merlin Ferm Domain Length = 323 Back     alignment and structure
>pdb|1E5W|A Chain A, Structure Of Isolated Ferm Domain And First Long Helix Of Moesin Length = 346 Back     alignment and structure
>pdb|1SGH|A Chain A, Moesin Ferm Domain Bound To Ebp50 C-Terminal Peptide Length = 297 Back     alignment and structure
>pdb|1EF1|A Chain A, Crystal Structure Of The Moesin Ferm DomainTAIL DOMAIN COMPLEX Length = 294 Back     alignment and structure
>pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms Resolution Length = 575 Back     alignment and structure
>pdb|2RQ1|A Chain A, Solution Structure Of The 4.1r Ferm Alpha Lobe Domain Length = 109 Back     alignment and structure
>pdb|4F7G|A Chain A, Crystal Structure Of Talin Autoinhibition Complex Length = 222 Back     alignment and structure
>pdb|1Y19|B Chain B, Structural Basis For Phosphatidylinositol Phosphate Kinase Type I-Gamma Binding To Talin At Focal Adhesions Length = 202 Back     alignment and structure
>pdb|3IVF|A Chain A, Crystal Structure Of The Talin Head Ferm Domain Length = 371 Back     alignment and structure
>pdb|1MIZ|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera Length = 201 Back     alignment and structure
>pdb|1MIX|A Chain A, Crystal Structure Of A Ferm Domain Of Talin Length = 206 Back     alignment and structure
>pdb|1MK7|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera Length = 192 Back     alignment and structure
>pdb|3G9W|A Chain A, Crystal Structure Of Talin2 F2-f3 In Complex With The Integrin Beta1d Cytoplasmic Tail Length = 223 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query356
1h4r_A314 Merlin; FERM, neurofibromatosis, NF2, structural p 3e-60
1ef1_A294 Moesin; membrane, FERM domain, tail domain, membra 3e-57
3qij_A296 Protein 4.1; cytoskeleton, structural genomics, st 5e-57
2i1j_A 575 Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, 4e-51
4f7g_A222 Talin-1; alpha-helix bundle, integrin activation, 2e-47
3ivf_A371 Talin-1; FERM domain, cell membrane, cell projecti 5e-46
1mix_A206 Talin; focal adhesion, integrin binding, FERM doma 9e-42
4dxa_B322 KREV interaction trapped protein 1; GTPase, FERM, 3e-31
4eku_A392 Protein-tyrosine kinase 2-beta; proline-rich tyros 3e-21
3pvl_A655 Myosin VIIA isoform 1; protein complex, novel fold 4e-18
3au4_A555 Myosin-X; protein-protein complex, motor protein c 6e-18
2al6_A375 Focal adhesion kinase 1; transferase; 2.35A {Gallu 8e-16
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 1e-04
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A Length = 314 Back     alignment and structure
 Score =  195 bits (497), Expect = 3e-60
 Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 6/211 (2%)

Query: 1   MYYVSGISL-ITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERH 59
            +Y       +  E+T++  FLQ+K  I++ +I C  + +V+LASY +QA++G+Y+   H
Sbjct: 100 KFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVH 159

Query: 60  TLEYLKDFALFPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGY 119
              +L    L PK ++   +    E   + +   ++   G ++  AE  Y+  AQ L+ Y
Sbjct: 160 KRGFLAQEELLPKRVINL-YQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDLEMY 218

Query: 120 GQETFLVKDEHGLETILGVTLKGIIV----SGTNSSKFYKWAEIANVLNHKKNFGIETSN 175
           G   F ++++ G E +LGV   G+ +    +       + W EI N+    K F I+  +
Sbjct: 219 GVNYFAIRNKKGTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSDKEFTIKPLD 278

Query: 176 ADDHIVNFVFPDVESAKYVFRMCVHQHTFYM 206
               +  F    +   K + ++C+  H  +M
Sbjct: 279 KKIDVFKFNSSKLRVNKLILQLCIGNHDLFM 309
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A Length = 294 Back     alignment and structure
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A Length = 296 Back     alignment and structure
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A Length = 575 Back     alignment and structure
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} Length = 222 Back     alignment and structure
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A Length = 371 Back     alignment and structure
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B Length = 206 Back     alignment and structure
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} Length = 322 Back     alignment and structure
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens} Length = 392 Back     alignment and structure
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus} Length = 655 Back     alignment and structure
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A Length = 555 Back     alignment and structure
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A Length = 375 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
3qij_A296 Protein 4.1; cytoskeleton, structural genomics, st 100.0
1ef1_A294 Moesin; membrane, FERM domain, tail domain, membra 100.0
1h4r_A314 Merlin; FERM, neurofibromatosis, NF2, structural p 100.0
2i1j_A 575 Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, 100.0
1mix_A206 Talin; focal adhesion, integrin binding, FERM doma 100.0
4f7g_A222 Talin-1; alpha-helix bundle, integrin activation, 100.0
3ivf_A371 Talin-1; FERM domain, cell membrane, cell projecti 100.0
4dxa_B322 KREV interaction trapped protein 1; GTPase, FERM, 100.0
2al6_A375 Focal adhesion kinase 1; transferase; 2.35A {Gallu 99.97
3pvl_A655 Myosin VIIA isoform 1; protein complex, novel fold 99.97
3au4_A555 Myosin-X; protein-protein complex, motor protein c 99.96
4eku_A392 Protein-tyrosine kinase 2-beta; proline-rich tyros 99.94
2j0j_A 656 Focal adhesion kinase 1; cell migration, FERM, tra 99.85
1hbk_A89 ACBP, acyl-COA binding protein; fatty acid metabol 97.24
3epy_A89 Acyl-COA-binding domain-containing protein 7; acyl 97.16
2cb8_A87 Acyl-COA-binding protein; acyl-coenzyme A binding 96.94
2lbb_A96 Acyl COA binding protein; protein binding, structu 96.86
1st7_A86 ACBP, acyl-COA-binding protein; four helix bundle, 96.84
2cop_A109 Acyl-coenzyme A binding domain containing 6; acyl 96.74
2wh5_A106 Acyl-COA-binding domain-containing protein 4; alte 96.53
2cqu_A116 Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi 96.38
3fp5_A106 Acyl-COA binding protein; ACBP, cacao disease, fat 96.09
3flv_A119 Acyl-COA-binding domain-containing protein 5; lipi 96.03
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A Back     alignment and structure
Probab=100.00  E-value=5.2e-49  Score=378.47  Aligned_cols=197  Identities=28%  Similarity=0.616  Sum_probs=185.1

Q ss_pred             CcccCCCCCCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCc
Q psy9052           1 MYYVSGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHN   80 (356)
Q Consensus         1 kFY~~d~~~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~   80 (356)
                      |||+++|..|.|++||+|+|+|+|+||++|+++|+.++|++||||++|+++|||+++.|..+|+....++|.+.      
T Consensus        95 kfy~~~~~~l~~~~tr~l~ylQ~~~dil~G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~------  168 (296)
T 3qij_A           95 KFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQT------  168 (296)
T ss_dssp             SSCCSCGGGSSCHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCC------
T ss_pred             EEeCCCchhccCHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCH------
Confidence            79999999999999999999999999999999999999999999999999999999889899999889999752      


Q ss_pred             chHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCCCceeEEeecCCCCeEEEEeeccceEE-eCccceeeeecccc
Q psy9052          81 GLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGYGQETFLVKDEHGLETILGVTLKGIIV-SGTNSSKFYKWAEI  159 (356)
Q Consensus        81 ~~le~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~YGv~~F~Vkd~~~~~l~LGV~~~GI~V-~~~~~~~~f~W~~I  159 (356)
                         ++|++.|.+.|++++|+|+.+|+.+||++|++||+||+++|.|++..|.++||||+.+||.| +.++++..|+|++|
T Consensus       169 ---~~~~~~I~~~h~~~~g~s~~eA~~~yL~~a~~l~~yG~~~f~vk~~~~~~~~LgV~~~Gi~v~~~~~kl~~f~w~~I  245 (296)
T 3qij_A          169 ---KELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKV  245 (296)
T ss_dssp             ---HHHHHHHHHHHHTCCSCCHHHHHHHHHHHHTTSTTTTCEEEEEECTTSCEEEEEECSSEEEEEETTEEEEEEEGGGE
T ss_pred             ---HHHHHHHHHHHHHccCCCHHHHHHHHHHHHhcccccCceEEEEEcCCCCEEEEEECCCeEEEEeCCCeEEEEEhhhc
Confidence               56889999999999999999999999999999999999999999999999999999999999 77777899999999


Q ss_pred             cceeccCceEEEEEcCCC----CceEEEEeCCHHHHHHHHHHHHHhhHHhh
Q psy9052         160 ANVLNHKKNFGIETSNAD----DHIVNFVFPDVESAKYVFRMCVHQHTFYM  206 (356)
Q Consensus       160 ~~lsf~~k~F~I~~~~~~----~~~~~F~~~s~~~AK~Lwklcie~H~Ffr  206 (356)
                      .+|+|++|+|+|++.+.+    +.++.|++++.++||+||++|+++|+|||
T Consensus       246 ~~~s~~~k~F~i~~~~~~~~~~~~~~~f~~~~~~~~k~l~~~c~~~h~ffr  296 (296)
T 3qij_A          246 LKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFR  296 (296)
T ss_dssp             EEEEEETTEEEEEEC-------CEEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred             CEEEecCCEEEEEEecCccCCccceEEEECCCHHHHHHHHHHHHHhccccC
Confidence            999999999999997542    35789999999999999999999999997
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A Back     alignment and structure
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A Back     alignment and structure
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A Back     alignment and structure
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B Back     alignment and structure
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} Back     alignment and structure
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A Back     alignment and structure
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A Back     alignment and structure
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A Back     alignment and structure
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus} Back     alignment and structure
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A Back     alignment and structure
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens} Back     alignment and structure
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Back     alignment and structure
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1 Back     alignment and structure
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1 Back     alignment and structure
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A Back     alignment and structure
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis} Back     alignment and structure
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens} Back     alignment and structure
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0 Back     alignment and structure
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 356
d1h4ra1111 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) 3e-30
d1ef1a1111 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [ 2e-28
d1gg3a1106 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1 3e-27
d1mixa1114 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus 2e-25
d1ef1a299 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) 1e-23
d1h4ra299 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) 9e-23
d1gg3a292 b.55.1.5 (A:188-279) Erythroid membrane protein 4. 4e-18
d2al6a1123 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chic 4e-11
>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 Back     information, alignment and structure

class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Merlin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 3e-30
 Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 10  ITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFAL 69
           +  E+T++  FLQ+K  I++ +I C  + +V+LASY +QA++G+Y+   H   +L    L
Sbjct: 6   LVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEEL 65

Query: 70  FPKDLVENGHNGLLERLTDAVIQQHSALVGLSQGTAEEYYILAAQQL 116
            PK ++   +    E   + +   ++   G ++  AE  Y+  AQ L
Sbjct: 66  LPKRVINL-YQMTPEMWEERITAWYAEHRGRARDEAEMEYLKIAQDL 111
>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 Back     information, alignment and structure
>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Length = 106 Back     information, alignment and structure
>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 114 Back     information, alignment and structure
>d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId: 9606]} Length = 99 Back     information, alignment and structure
>d1h4ra2 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) [TaxId: 9606]} Length = 99 Back     information, alignment and structure
>d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Length = 92 Back     information, alignment and structure
>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 123 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query356
d1gg3a1106 Erythroid membrane protein 4.1R {Human (Homo sapie 99.96
d1mixa1114 Talin {Chicken (Gallus gallus) [TaxId: 9031]} 99.95
d1h4ra1111 Merlin {Human (Homo sapiens) [TaxId: 9606]} 99.94
d1ef1a1111 Moesin {Human (Homo sapiens) [TaxId: 9606]} 99.94
d1ef1a299 Moesin {Human (Homo sapiens) [TaxId: 9606]} 99.92
d1h4ra299 Merlin {Human (Homo sapiens) [TaxId: 9606]} 99.92
d1gg3a292 Erythroid membrane protein 4.1R {Human (Homo sapie 99.88
d2al6a1123 Focal adhesion kinase 1 {Chicken (Gallus gallus) [ 99.86
d1mixa292 Talin {Chicken (Gallus gallus) [TaxId: 9031]} 98.29
d1hb6a_86 Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 97.47
d1hbka_89 Acyl-CoA binding protein {Plasmodium falciparum [T 96.56
d1xr0b_129 FGFR substrate 2 (SNT-1) {Human (Homo sapiens) [Ta 91.94
d1j0wa_99 Downstream of tyrosine kinase 5, Dok-5 {Human (Hom 89.58
d1qqga2104 Insulin receptor substrate 1, IRS-1 {Human (Homo s 87.96
d2al6a2110 Focal adhesion kinase 1 {Chicken (Gallus gallus) [ 82.64
>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Acyl-CoA binding protein-like
superfamily: Second domain of FERM
family: Second domain of FERM
domain: Erythroid membrane protein 4.1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-29  Score=207.90  Aligned_cols=106  Identities=31%  Similarity=0.645  Sum_probs=101.4

Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHhhhCCCCCccchhhhhhhhccCCchhhhcCCcchHH
Q psy9052           5 SGISLITDEMTRYHCFLQLKNDIIEGRIQCNLDDAVVLASYCMQAEFGNYNSERHTLEYLKDFALFPKDLVENGHNGLLE   84 (356)
Q Consensus         5 ~d~~~L~de~TR~LlYLQlr~dIl~Grlpcs~e~av~LAAL~lQae~GDy~~~~h~~~yl~~~~~lP~~i~~~~~~~~le   84 (356)
                      |||..|.|++|||+||+|+|+||++|+++|+.++|++||||++||++|||+++.|..+|+....++|.+.         +
T Consensus         1 pdp~~L~~e~Tr~l~ylQlr~~i~~G~~~~~~~~a~~Laal~~Qae~GD~~~~~~~~~yl~~~~~~p~~~---------~   71 (106)
T d1gg3a1           1 PDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQT---------K   71 (106)
T ss_dssp             SSGGGSSCHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTSCSSCCGGGSCCCSSCC---------H
T ss_pred             CCHHHhccHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHhCCCCccccchhhhhHHhcCCccH---------H
Confidence            6899999999999999999999999999999999999999999999999999999999999999999753         5


Q ss_pred             HHHHHHHHHhhhccCCCHHHHHHHHHHHHhcCCCC
Q psy9052          85 RLTDAVIQQHSALVGLSQGTAEEYYILAAQQLDGY  119 (356)
Q Consensus        85 ~~~~~I~~~Hk~L~GmS~~eAe~~FL~~a~~Lp~Y  119 (356)
                      +|+++|...|++++|||+.+|+..||++|++||+|
T Consensus        72 ~~~~~I~~~h~~l~G~s~~~A~~~fL~~~~~l~~Y  106 (106)
T d1gg3a1          72 ELEEKVMELHKSYRSMTPAQADLEFLENAKKLSMY  106 (106)
T ss_dssp             HHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHHccCcCHHHHHHHHHHHHhcCCCC
Confidence            68999999999999999999999999999999998
>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h4ra2 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1xr0b_ b.55.1.2 (B:) FGFR substrate 2 (SNT-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j0wa_ b.55.1.2 (A:) Downstream of tyrosine kinase 5, Dok-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qqga2 b.55.1.2 (A:159-262) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure