Psyllid ID: psy9122

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MFQNGDNLDSLIASTASSNGQSKIEEVLQFCTHFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFPQRTELVIDQYMV
Secondary Structure (PSIPRED)
cccccccccHHHHHccccccccccccEEcccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccEEEEccccccccHHHHHHHHHHcccccEEccccccccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHEccccccccHHHHHHHHccccccccccccccccHHHHHcccEcEEEEEccccHHHHHHHHHHHHHccHHHHHcccccccEEEEEcccccHHHHHcccccccEEEEEccccccccHHHHHHHHHHccccEEEEccccccccccccccccEEEccccc
Coil and Loop (DISEMBL)
MFQNGDNLDSLIASTASSNGQSKIEEVLQFcthfdfppsspdlssydsfswkyvkNKVYIYKTRTLDELTGASYREIRAIAQERLKThhfknrqvtlepdfpyvealapfqplamksihcpidtslnFNQANKLIRelkpstlvvpdcythpppsfpqrtelVIDQYMV
Flexible Loop (DISEMBL)
mfqngdnlDSLIASTASSNGQSKIEEVLQFCTHFDFPPSSPDLSSYDSFSWKYVKNKVYIYktrtldeltgasYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYthpppsfpqrtelVIDQYMV
Low Complexity Region (SEG)
MFQNGDNLDSLIASTASSNGQSKIEEVLQFCTHfdfppsspdlssydsfsWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFPQRTELVIDQYMV
Disordered region (IsUnstruct)
************************EEVLQFCTHFDFP*****LSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH******************
Disordered Region (DISOPRED)
*********************SKIEEVLQFCTHFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFPQRTELVIDQYMV
Disordered Region (DISEMBL)
MFQNGDNLDSLIASTASSNGQSKIEEVLQFCTHFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFPQRTELVIDQYMV
Disordered Region (DISPRO)
*****DNLDSLIASTAS*NGQSKIEEVLQFCTHFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFPQRTEL*I*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFQNGDNLDSLIASTASSNGQSKIEEVLQFCTHFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFPQRTELVIDQYMV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	169	2.2.26 [Sep-21-2011]
A7SBF0	660	Integrator complex subuni	N/A	N/A	0.437	0.112	0.594	3e-20
Q5ZKK2	658	Integrator complex subuni	yes	N/A	0.437	0.112	0.567	8e-19
Q8K114	658	Integrator complex subuni	yes	N/A	0.437	0.112	0.567	1e-18
Q4R5Z4	637	Integrator complex subuni	N/A	N/A	0.437	0.116	0.567	1e-18
Q9NV88	658	Integrator complex subuni	yes	N/A	0.437	0.112	0.567	2e-18
Q2KJA6	658	Integrator complex subuni	yes	N/A	0.437	0.112	0.540	2e-17
Q6DFF4	658	Integrator complex subuni	N/A	N/A	0.437	0.112	0.527	3e-17
Q54SH0	712	Integrator complex subuni	yes	N/A	0.349	0.082	0.389	2e-05

>sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog OS=Nematostella vectensis GN=ints9 PE=3 SV=1

 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 57/74 (77%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDFPY+EALAP+QPLAMK+ +CPID  LNF QANKL++EL+P  LV+P+ Y+ 
Sbjct: 422 NTVIFTEPDFPYLEALAPYQPLAMKTCYCPIDPRLNFAQANKLLKELQPRHLVMPESYSR 481

Query: 152 PPPSFPQRTELVID 165
           PP   P RT+L I+
Sbjct: 482 PPVIHPHRTDLTIE 495

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing.
Nematostella vectensis (taxid: 45351)

>sp|Q5ZKK2|INT9_CHICK Integrator complex subunit 9 OS=Gallus gallus GN=INTS9 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 57/74 (77%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDF Y++ALAP+QPLAMK ++CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct: 418 NTVIFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query: 152 PPPSFPQRTELVID 165
           PPPS   RT+L+ID
Sbjct: 478 PPPSQSHRTDLMID 491

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing.

Gallus gallus (taxid: 9031)

>sp|Q8K114|INT9_MOUSE Integrator complex subunit 9 OS=Mus musculus GN=Ints9 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct: 418 NTIIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query: 152 PPPSFPQRTELVID 165
           PPP+   R +L+ID
Sbjct: 478 PPPAQAHRMDLMID 491

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.

Mus musculus (taxid: 10090)

>sp|Q4R5Z4|INT9_MACFA Integrator complex subunit 9 OS=Macaca fascicularis GN=INTS9 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct: 397 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 456

Query: 152 PPPSFPQRTELVID 165
           PPP+   R +L+ID
Sbjct: 457 PPPAQSHRMDLMID 470

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.

Macaca fascicularis (taxid: 9541)

>sp|Q9NV88|INT9_HUMAN Integrator complex subunit 9 OS=Homo sapiens GN=INTS9 PE=1 SV=2

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct: 418 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query: 152 PPPSFPQRTELVID 165
           PPP+   R +L+ID
Sbjct: 478 PPPAQSHRMDLMID 491

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.

Homo sapiens (taxid: 9606)

>sp|Q2KJA6|INT9_BOVIN Integrator complex subunit 9 OS=Bos taurus GN=INTS9 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 55/74 (74%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct: 418 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query: 152 PPPSFPQRTELVID 165
           P P+   R +L++D
Sbjct: 478 PTPAQSHRMDLMVD 491

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.

Bos taurus (taxid: 9913)

>sp|Q6DFF4|INT9_XENLA Integrator complex subunit 9 OS=Xenopus laevis GN=ints9 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 55/74 (74%)

Query: 92  NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
           N  +  EPDF Y++ALAP+QPLAMK ++CPIDT LNF Q  KL++E++P  +V P+ YT 
Sbjct: 418 NTVIFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVTKLLKEVQPLHVVCPEQYTQ 477

Query: 152 PPPSFPQRTELVID 165
           PP +   R++L+ID
Sbjct: 478 PPATQSHRSDLMID 491

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing.

Xenopus laevis (taxid: 8355)

>sp|Q54SH0|INT9_DICDI Integrator complex subunit 9 homolog OS=Dictyostelium discoideum GN=ints9 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 33/59 (55%)

Query: 91  KNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCY 149
           KN  + +EPDF +   + PF     +    PID  +NFN+AN LI +L P  L++P  Y
Sbjct: 451 KNSILLIEPDFDFKSTVLPFSKQISRIQFLPIDPRINFNEANLLISKLSPKHLIIPRIY 509

Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
383862659	661	PREDICTED: integrator complex subunit 9-	0.402	0.102	0.75	2e-24
380023750	661	PREDICTED: integrator complex subunit 9-	0.402	0.102	0.75	2e-24
340719906	661	PREDICTED: integrator complex subunit 9-	0.402	0.102	0.75	2e-24
380023752	644	PREDICTED: integrator complex subunit 9-	0.402	0.105	0.75	3e-24
350408417	644	PREDICTED: integrator complex subunit 9-	0.402	0.105	0.75	3e-24
350408420	661	PREDICTED: integrator complex subunit 9-	0.402	0.102	0.75	3e-24
332025996	638	Integrator complex subunit 9 [Acromyrmex	0.402	0.106	0.735	3e-23
307189043	661	Integrator complex subunit 9 [Camponotus	0.402	0.102	0.735	4e-23
307202731	608	Integrator complex subunit 9 [Harpegnath	0.402	0.111	0.720	7e-23
321469645	650	hypothetical protein DAPPUDRAFT_303892 [	0.485	0.126	0.634	9e-23

>gi|383862659|ref|XP_003706801.1| PREDICTED: integrator complex subunit 9-like [Megachile rotundata]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 61/68 (89%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP + P
Sbjct: 425 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPMTAP 484

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 485 HRTDLVIE 492

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023750|ref|XP_003695675.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Apis florea]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 61/68 (89%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP + P
Sbjct: 425 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAP 484

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 485 HRTDLVIE 492

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719906|ref|XP_003398385.1| PREDICTED: integrator complex subunit 9-like [Bombus terrestris]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 61/68 (89%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP + P
Sbjct: 425 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAP 484

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 485 HRTDLVIE 492

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023752|ref|XP_003695676.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Apis florea]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 61/68 (89%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP + P
Sbjct: 410 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAP 469

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 470 HRTDLVIE 477

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408417|ref|XP_003488397.1| PREDICTED: integrator complex subunit 9-like isoform 1 [Bombus impatiens]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 61/68 (89%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP + P
Sbjct: 410 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAP 469

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 470 HRTDLVIE 477

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350408420|ref|XP_003488398.1| PREDICTED: integrator complex subunit 9-like isoform 2 [Bombus impatiens]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 61/68 (89%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP + P
Sbjct: 425 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPITAP 484

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 485 HRTDLVIE 492

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025996|gb|EGI66149.1| Integrator complex subunit 9 [Acromyrmex echinatior]

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 59/68 (86%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY+EALAPFQPL+MK++HCPIDTSLNF QANKLIR+LKP  LV+P+ YT PP   P
Sbjct: 402 EPDFPYLEALAPFQPLSMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPGMAP 461

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 462 HRTDLVIE 469

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189043|gb|EFN73542.1| Integrator complex subunit 9 [Camponotus floridanus]

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 50/68 (73%), Positives = 60/68 (88%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+ YT PP + P
Sbjct: 425 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPEVYTQPPLTAP 484

Query: 158 QRTELVID 165
            RT+LVI+
Sbjct: 485 HRTDLVIE 492

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202731|gb|EFN82022.1| Integrator complex subunit 9 [Harpegnathos saltator]

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 59/68 (86%)

Query: 98  EPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTHPPPSFP 157
           EPDFPY++ALAPFQPLAMK++HCPIDTSLNF QANKLIR+LKP  LV+P+CYT PP +  
Sbjct: 394 EPDFPYLDALAPFQPLAMKAVHCPIDTSLNFTQANKLIRDLKPEHLVIPECYTQPPLTAS 453

Query: 158 QRTELVID 165
            R +LVI+
Sbjct: 454 HRADLVIE 461

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321469645|gb|EFX80624.1| hypothetical protein DAPPUDRAFT_303892 [Daphnia pulex]

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 63/82 (76%)

Query: 85  LKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLV 144
           L   H  +  V +EPDFPY+EALAP+QPL MK +HCPIDTSL+F QANKLIR+LKP  L+
Sbjct: 412 LWGSHSNHSIVFVEPDFPYLEALAPYQPLTMKIVHCPIDTSLSFTQANKLIRDLKPGNLL 471

Query: 145 VPDCYTHPPPSFPQRTELVIDQ 166
           VPD Y HPP S P R++LVI +
Sbjct: 472 VPDVYLHPPVSAPLRSDLVIQE 493

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	169
FB|FBgn0036570	654	IntS9 "Integrator 9" [Drosophi	0.426	0.110	0.626	2.2e-20
UNIPROTKB|E2QVB2	409	INTS9 "Uncharacterized protein	0.437	0.180	0.567	1.2e-18
UNIPROTKB|Q5ZKK2	658	INTS9 "Integrator complex subu	0.437	0.112	0.567	1.2e-18
ZFIN|ZDB-GENE-061013-129	658	ints9 "integrator complex subu	0.437	0.112	0.527	1.5e-18
UNIPROTKB|G3XAN1	525	INTS9 "Integrator complex subu	0.437	0.140	0.567	2.6e-18
UNIPROTKB|H7BYQ6	552	INTS9 "Integrator complex subu	0.437	0.134	0.567	2.9e-18
UNIPROTKB|F1RJQ5	576	INTS9 "Uncharacterized protein	0.437	0.128	0.567	3.2e-18
UNIPROTKB|F6XI08	658	INTS9 "Uncharacterized protein	0.437	0.112	0.567	4.2e-18
UNIPROTKB|Q9NV88	658	INTS9 "Integrator complex subu	0.437	0.112	0.567	4.2e-18
RGD|1311539	659	Ints9 "integrator complex subu	0.437	0.112	0.567	4.2e-18

FB|FBgn0036570 IntS9 "Integrator 9" [Drosophila melanogaster (taxid:7227)]

 Score = 250 (93.1 bits), Expect = 2.2e-20, P = 2.2e-20
 Identities = 47/75 (62%), Positives = 58/75 (77%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDFPY++ LAPFQPLAMK+ +CPIDTSLN+ QANKLI+ELKP+ LV+P+ YT 
Sbjct:   418 NSIIFTEPDFPYLQVLAPFQPLAMKAFYCPIDTSLNYQQANKLIKELKPNVLVIPEAYTK 477

Query:   152 PPPSFPQRTELVIDQ 166
             P PS P    L I+Q
Sbjct:   478 PHPSAPN---LFIEQ 489

GO:0005847 "mRNA cleavage and polyadenylation specificity factor complex" evidence=ISS

GO:0006379 "mRNA cleavage" evidence=ISS

GO:0006378 "mRNA polyadenylation" evidence=ISS

GO:0034472 "snRNA 3'-end processing" evidence=IDA

GO:0032039 "integrator complex" evidence=ISS

GO:0016180 "snRNA processing" evidence=ISS

UNIPROTKB|E2QVB2 INTS9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 229 (85.7 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   169 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 228

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   229 PPPAQSHRMDLMID 242

GO:0032039 "integrator complex" evidence=IEA

GO:0016180 "snRNA processing" evidence=IEA

UNIPROTKB|Q5ZKK2 INTS9 "Integrator complex subunit 9" [Gallus gallus (taxid:9031)]

 Score = 234 (87.4 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 42/74 (56%), Positives = 57/74 (77%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y++ALAP+QPLAMK ++CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   418 NTVIFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query:   152 PPPSFPQRTELVID 165
             PPPS   RT+L+ID
Sbjct:   478 PPPSQSHRTDLMID 491

GO:0016180 "snRNA processing" evidence=IEA

GO:0032039 "integrator complex" evidence=IEA

ZFIN|ZDB-GENE-061013-129 ints9 "integrator complex subunit 9" [Danio rerio (taxid:7955)]

 Score = 233 (87.1 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 39/74 (52%), Positives = 59/74 (79%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y++ALAP+QPLAMK ++CPIDT LNF+Q +KL+++++P  +V P+ YT 
Sbjct:   418 NTIIFTEPDFSYLDALAPYQPLAMKCVYCPIDTRLNFHQVSKLLKDIQPLHVVCPEPYTQ 477

Query:   152 PPPSFPQRTELVID 165
             PPPS P R++L+++
Sbjct:   478 PPPSQPHRSDLMLE 491

GO:0016180 "snRNA processing" evidence=IEA

GO:0032039 "integrator complex" evidence=IEA

UNIPROTKB|G3XAN1 INTS9 "Integrator complex subunit 9" [Homo sapiens (taxid:9606)]

 Score = 229 (85.7 bits), Expect = 2.6e-18, P = 2.6e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   418 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   478 PPPAQSHRMDLMID 491

GO:0016180 "snRNA processing" evidence=IEA

GO:0032039 "integrator complex" evidence=IEA

UNIPROTKB|H7BYQ6 INTS9 "Integrator complex subunit 9" [Homo sapiens (taxid:9606)]

 Score = 229 (85.7 bits), Expect = 2.9e-18, P = 2.9e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   312 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 371

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   372 PPPAQSHRMDLMID 385

GO:0016180 "snRNA processing" evidence=IEA

GO:0032039 "integrator complex" evidence=IEA

UNIPROTKB|F1RJQ5 INTS9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 229 (85.7 bits), Expect = 3.2e-18, P = 3.2e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   336 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 395

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   396 PPPAQSHRMDLMID 409

GO:0032039 "integrator complex" evidence=IEA

GO:0016180 "snRNA processing" evidence=IEA

UNIPROTKB|F6XI08 INTS9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 229 (85.7 bits), Expect = 4.2e-18, P = 4.2e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   418 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   478 PPPAQSHRMDLMID 491

GO:0032039 "integrator complex" evidence=IEA

GO:0016180 "snRNA processing" evidence=IEA

UNIPROTKB|Q9NV88 INTS9 "Integrator complex subunit 9" [Homo sapiens (taxid:9606)]

 Score = 229 (85.7 bits), Expect = 4.2e-18, P = 4.2e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   418 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 477

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   478 PPPAQSHRMDLMID 491

GO:0005515 "protein binding" evidence=IPI

GO:0016180 "snRNA processing" evidence=IDA

GO:0032039 "integrator complex" evidence=IDA

RGD|1311539 Ints9 "integrator complex subunit 9" [Rattus norvegicus (taxid:10116)]

 Score = 229 (85.7 bits), Expect = 4.2e-18, P = 4.2e-18
 Identities = 42/74 (56%), Positives = 56/74 (75%)

Query:    92 NRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPDCYTH 151
             N  +  EPDF Y+EALAP+QPLAMK I+CPIDT LNF Q +KL++E++P  +V P+ YT 
Sbjct:   419 NTVIFTEPDFSYLEALAPYQPLAMKCIYCPIDTRLNFIQVSKLLKEVQPLHVVCPEQYTQ 478

Query:   152 PPPSFPQRTELVID 165
             PPP+   R +L+ID
Sbjct:   479 PPPAQSHRMDLMID 492

GO:0016180 "snRNA processing" evidence=IEA;ISO

GO:0032039 "integrator complex" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9NV88	INT9_HUMAN	No assigned EC number	0.5675	0.4378	0.1124	yes	N/A
Q5ZKK2	INT9_CHICK	No assigned EC number	0.5675	0.4378	0.1124	yes	N/A
Q8K114	INT9_MOUSE	No assigned EC number	0.5675	0.4378	0.1124	yes	N/A
Q2KJA6	INT9_BOVIN	No assigned EC number	0.5405	0.4378	0.1124	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	169
KOG1138|consensus	653		99.94
PF13358	146	DDE_3: DDE superfamily endonuclease	99.41
COG3335	132	Transposase and inactivated derivatives [DNA repli	97.07
PF13333	52	rve_2: Integrase core domain	85.86

>KOG1138|consensus

Probab=99.94  E-value=9.5e-28  Score=217.21  Aligned_cols=99  Identities=40%  Similarity=0.616  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHhhhhHHHHhhccCCceeEEeCCCCCcccccCCCcccceeeeeeccccCcChhHHHHhhhhcCcCeEEccC
Q psy9122          68 ELTGASYREIRAIAQERLKTHHFKNRQVTLEPDFPYVEALAPFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVPD  147 (169)
Q Consensus        68 eLk~aI~raw~sIs~e~l~g~~~~N~ii~~ep~~~~~~~~~Pf~~l~~~~~~~pid~r~~~~~~~~li~~l~P~~~i~p~  147 (169)
                      ....+..++++..+..++||++|+|++|++||||+++++++|||||+||+++||||+||||.|+++|++++||++++||+
T Consensus       395 f~~H~SlRfgdv~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpe  474 (653)
T KOG1138|consen  395 FMGHPSLRFGDVVHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPE  474 (653)
T ss_pred             ecCCcchhhhHHHHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChh
Confidence            34456788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCCCCCCccceeecc
Q psy9122         148 CYTHPPPSFPQRTELVIDQ  166 (169)
Q Consensus       148 ~y~~p~~~~~~~~d~~i~~  166 (169)
                      .||+|++++|++++..+++
T Consensus       475 aytqp~~~ap~~~i~~~d~  493 (653)
T KOG1138|consen  475 AYTQPIPLAPIKTISILDY  493 (653)
T ss_pred             hhcCCCCccchheehhccc
Confidence            9999999999999988875

>PF13358 DDE_3: DDE superfamily endonuclease

Probab=99.41  E-value=2.4e-14  Score=106.21  Aligned_cols=61  Identities=30%  Similarity=0.459  Sum_probs=55.1

Q ss_pred             hhhhhhcccccchhhhHHHHhc--CC--cccCCCCCCCCCccccccccccccccccCCCCCHHHHH
Q psy9122           9 DSLIASTASSNGQSKIEEVLQF--CT--HFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELT   70 (169)
Q Consensus         9 ~~~~~~~a~~~~~~~~~~wi~r--~~--~~~WPp~SPDLnPidf~lW~~LK~~vy~~~~~~ieeLk   70 (169)
                      -.++.++|++|+.+.+.+|+..  .+  .+.|||||||||||| .+|+.||+.+.++.+.|+++||
T Consensus        82 ~~li~DNa~~H~~~~~~~~l~~~~~~~~~~~~P~~sPdLNpiE-~~w~~lk~~~~~~~~~~~~~Lk  146 (146)
T PF13358_consen   82 IVLIMDNASIHKSKKVQEWLEEHERGIELLFLPPYSPDLNPIE-NVWGYLKRRIRRRRFSSIEELK  146 (146)
T ss_pred             EEEecccccccccccccceeeccccccccccccCcCCccCHHH-HHHHHHHHHHHhcCCCChHHhC
Confidence            3478899999999999999987  54  578999999999999 5999999999988999999985

>COG3335 Transposase and inactivated derivatives [DNA replication, recombination, and repair]

Probab=97.07  E-value=0.00049  Score=49.49  Aligned_cols=66  Identities=21%  Similarity=0.181  Sum_probs=45.2

Q ss_pred             hhhhc-ccccchhhhHHHHhcCCc--ccCCCCCCCCCcccccccccccc-ccccCCCCCHHHHHHHHHHHH
Q psy9122          11 LIAST-ASSNGQSKIEEVLQFCTH--FDFPPSSPDLSSYDSFSWKYVKN-KVYIYKTRTLDELTGASYREI   77 (169)
Q Consensus        11 ~~~~~-a~~~~~~~~~~wi~r~~~--~~WPp~SPDLnPidf~lW~~LK~-~vy~~~~~~ieeLk~aI~raw   77 (169)
                      .+-++ |+.|....+.+.+++.+.  +.=|++|||+||+|+ +|..+|. .++.......+.+++.+....
T Consensus        46 ~~~~~~~~~~~~~~i~~~~~~~~~~~~flp~y~p~~n~ie~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  115 (132)
T COG3335          46 LILDNVASFHRKKALKEDAEENGIHLLFLPPYSPDLNPIEY-AWKKLKIRRLKKILYLYEELIKDLLSLLG  115 (132)
T ss_pred             EEecCCcccchHHHHHHHHHhCCccEEEcCCCCCCccHHHH-HHHHHHHHhhcccccchHHHHHHHHHHHH
Confidence            34444 788887777777777653  467999999999995 9999994 555555555444555444443

>PF13333 rve_2: Integrase core domain

Probab=85.86  E-value=0.41  Score=30.83  Aligned_cols=30  Identities=27%  Similarity=0.226  Sum_probs=25.4

Q ss_pred             ccccccccc-ccCCCCCHHHHHHHHHHHHhh
Q psy9122          50 SWKYVKNKV-YIYKTRTLDELTGASYREIRA   79 (169)
Q Consensus        50 lW~~LK~~v-y~~~~~~ieeLk~aI~raw~s   79 (169)
                      +||.||... ++....|.+++++.|.+.+.-
T Consensus         3 ff~~lK~E~~~~~~~~t~eel~~~I~~YI~~   33 (52)
T PF13333_consen    3 FFGTLKTEMLYRQKFKTREELKQAIDEYIDY   33 (52)
T ss_pred             chHhhcchhcCCcccchHHHHHHHHHHHHHH
Confidence            699999875 777899999999999887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	169
2f7t_A	227	MOS1 transposase; RNAse-H like fold, DDD motif, DN	99.66
3f2k_A	226	Histone-lysine N-methyltransferase setmar; histone	99.65
3hot_A	345	Transposable element mariner, complete CDS; protei	99.5
2i7t_A	459	Cleavage and polyadenylation specificity factor 73	88.38

>2f7t_A MOS1 transposase; RNAse-H like fold, DDD motif, DNA binding protein; 2.25A {Drosophila mauritiana}

Probab=99.66  E-value=1.1e-17  Score=135.16  Aligned_cols=77  Identities=13%  Similarity=0.097  Sum_probs=71.3

Q ss_pred             hhhhhcccccchhhhHHHHhcCC--cccCCCCCCCCCccccccccccccccccCCCCCHHHHHHHHHHHHhhhhHHHHh
Q psy9122          10 SLIASTASSNGQSKIEEVLQFCT--HFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLK   86 (169)
Q Consensus        10 ~~~~~~a~~~~~~~~~~wi~r~~--~~~WPp~SPDLnPidf~lW~~LK~~vy~~~~~~ieeLk~aI~raw~sIs~e~l~   86 (169)
                      -+.+++|+.|+++.+++|+...+  .+.|||||||||||||++|+.||+.++++.+.|.++|++++.++|++++.+++.
T Consensus       127 ~~~~Dna~~H~~~~~~~~~~~~~~~~~~~p~ysPdlnpie~~~w~~lk~~l~~~~~~~~~~l~~~i~~~~~~~~~~~~~  205 (227)
T 2f7t_A          127 IFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLAPSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYW  205 (227)
T ss_dssp             EEECCCCGGGGSHHHHHHHHHHTCEECCCCTTCGGGCHHHHTHHHHHHHHHHTCCBCSHHHHHHHHHHHHHHSCHHHHH
T ss_pred             EEEECCCchhhhHHHHHHHHHhCcccccCCCCCCCcCcccchhhHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCHHHHH
Confidence            47899999999999999998765  578999999999999889999999999999999999999999999999987765

>3f2k_A Histone-lysine N-methyltransferase setmar; histone-lysine N-methyltransferase setmar, SET domain and mariner transposase fusion; 1.85A {Homo sapiens} PDB: 3k9k_A 3k9j_A

Probab=99.65  E-value=9e-18  Score=136.49  Aligned_cols=77  Identities=16%  Similarity=0.122  Sum_probs=71.4

Q ss_pred             hhhhhcccccchhhhHHHHhcCC--cccCCCCCCCCCccccccccccccccccCCCCCHHHHHHHHHHHHhhhhHHHHh
Q psy9122          10 SLIASTASSNGQSKIEEVLQFCT--HFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLK   86 (169)
Q Consensus        10 ~~~~~~a~~~~~~~~~~wi~r~~--~~~WPp~SPDLnPidf~lW~~LK~~vy~~~~~~ieeLk~aI~raw~sIs~e~l~   86 (169)
                      -+++++|+.|+++.+++|+...+  .+.|||||||||||||++|+.||+.++++.+.|.++|++++.++|++++.+++.
T Consensus       126 i~~~Dna~~H~~~~~~~~l~~~~~~~~~~P~ySPdlnpie~~~w~~lk~~l~~~~~~~~~~l~~~i~~~~~~~~~~~~~  204 (226)
T 3f2k_A          126 ILLHDNARPHVAQPTLQKLNELGYEVLPHPPYSPDLLPTNYHVFKHLNNFLQGKRFHNQQDAENAFQEFVESQSTDFYA  204 (226)
T ss_dssp             EEECCCCHHHHSTTHHHHHHHHTCEECCCCTTCGGGCHHHHTHHHHHHHHHTTCBCSSHHHHHHHHHHHHHTSCTTHHH
T ss_pred             EEEeCCCccchhhhHHHHHHhhcceeecCCCCCCCcchHHHHHHHHHHHHHHhcCCccHHHHHHHHHhHHhhcCcHHHH
Confidence            37889999999999999999876  479999999999999889999999999999999999999999999999987765

>3hot_A Transposable element mariner, complete CDS; protein-DNA complex, synaptic complex, transposase, inverted DNA, DNA binding protein-DNA complex; HET: 5IU; 3.25A {Drosophila mauritiana} PDB: 3hos_A*

Probab=99.50  E-value=3.5e-15  Score=125.29  Aligned_cols=77  Identities=13%  Similarity=0.097  Sum_probs=71.6

Q ss_pred             hhhhhcccccchhhhHHHHhcCC--cccCCCCCCCCCccccccccccccccccCCCCCHHHHHHHHHHHHhhhhHHHHh
Q psy9122          10 SLIASTASSNGQSKIEEVLQFCT--HFDFPPSSPDLSSYDSFSWKYVKNKVYIYKTRTLDELTGASYREIRAIAQERLK   86 (169)
Q Consensus        10 ~~~~~~a~~~~~~~~~~wi~r~~--~~~WPp~SPDLnPidf~lW~~LK~~vy~~~~~~ieeLk~aI~raw~sIs~e~l~   86 (169)
                      .+.+++|+.|+...+.+|+...|  .+.|||||||||||||++|+.||+.++++.+.|.++|++++.++|.+++.+++.
T Consensus       245 ~~~~Dna~~h~~~~~~~~l~~~~~~~~~~p~~spdlnpie~~~~~~lk~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~  323 (345)
T 3hot_A          245 IFLHDNAPSHTARAVRDTLETLNWEVLPHAAYSPDLAPSDYHLFASMGHALAEQRFDSYESVKKWLDEWFAAKDDEFYW  323 (345)
T ss_dssp             EEECCCCTTTTSHHHHHHHHHTTCEECCCCTTCGGGCHHHHTHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHSCSHHHH
T ss_pred             EEEECCCCccccHHHHHHHHHcCcEeccCCCCCCCcccccchhhHHHHHHhccccCCCHHHHHHHHHHHHHHhhHHHHH
Confidence            47889999999999999999987  478999999999999889999999999999999999999999999999987765

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A

Probab=88.38  E-value=1  Score=39.07  Aligned_cols=63  Identities=17%  Similarity=0.187  Sum_probs=47.8

Q ss_pred             HHHHhhccCCceeEEeCCCCCccccc---------------CCCcccceeeeeeccccCcChhHHHHhhhhcCcCeEEcc
Q psy9122          82 QERLKTHHFKNRQVTLEPDFPYVEAL---------------APFQPLAMKSIHCPIDTSLNFNQANKLIRELKPSTLVVP  146 (169)
Q Consensus        82 ~e~l~g~~~~N~ii~~ep~~~~~~~~---------------~Pf~~l~~~~~~~pid~r~~~~~~~~li~~l~P~~~i~p  146 (169)
                      ....|..+++|+|+|+.....  ..+               .-..++.+++..++..-.-|+.++.++|+.++|+++++.
T Consensus       340 ~l~~~~~~~~~~ii~~gy~~~--gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~~v~~v  417 (459)
T 2i7t_A          340 LFESWCTDKRNGVIIAGYCVE--GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILV  417 (459)
T ss_dssp             HHHHHTTCTTCEEEECSCCCT--TSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred             HHHHHcCCCCCeEEEEecCCC--CChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCCeEEEe
Confidence            345567889999999765443  322               123346788888888777999999999999999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	169
d2i7xa1	514	Cleavage factor two protein 2, CFT2 {Baker's yeast	92.11

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage factor two protein 2, CFT2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.11  E-value=0.043  Score=46.82  Aligned_cols=22  Identities=18%  Similarity=0.289  Sum_probs=19.5

Q ss_pred             cChhHHHHhhhhcCcCeEEccC
Q psy9122         126 LNFNQANKLIRELKPSTLVVPD  147 (169)
Q Consensus       126 ~~~~~~~~li~~l~P~~~i~p~  147 (169)
                      -|..++..+++.++|++||+--
T Consensus       461 ad~~el~~~~~~~~P~~vvlvH  482 (514)
T d2i7xa1         461 VDQRSASIIWPSLKSRKIVLSA  482 (514)
T ss_dssp             CCHHHHHHHGGGSCCSEEEECS
T ss_pred             CCHHHHHHHHHhhCCCEEEEeC
Confidence            7888999999999999998753