Psyllid ID: psy9182

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480------
Protein Sequence
MTILYDPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVSI
Secondary Structure (PSIPRED)
ccEEccccccccccccccccccccccccccccccccccccccEEEccccccccccccHHHHHHHHHHcccccccccEEEEEccHHcEEEccccEEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEEccEEEEccccccEEEccccEEEEEcccccEEEEEcccccEEEcccccccccccccccEEEEEEcccEEEEEEEcccccccEEEEEEEcccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEcccEEEEEcccccEEEEEcccccEEEEcccccccEEEEEEcccEEEEEcccccEEEcccccccccccccccccccccEEEEEEcccEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEcccEEEEccccccEEEEEcccccEEEEcccccccEEEEEEcccEEEEEcccccEEEEEccccccccccccccEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccccccEEEccccccEEEEEcccccEEEEEEEccEcccccccccEEEEccccccccEEEEEccccEEEEEEcccccEEEEEccccccEccccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEcccccEEEEEcccEEEEcccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEcccccEEEEEEcccccEEEEEEEcccccccEEEEEEcccEEEEcccccEEEEEEcccccEEEEEccccccEEEEEccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccEEEEEccccEEEEEEcccccEEEEcccccEEEEEEEEc
Coil and Loop (DISEMBL)
mtilydpnrkkepapqfasekemcpyltisvssaspqlppmtilydpnrkkepapqfaseKEMCFKYFDKWSEQDQIDFVENLLSRMCHYqhghintylkpmlQRDFisllpnfdekYIVSASGDRTIKVWNTSSCEFVRTlnghkrgiaCLQYRdrlvvsgssdntiryrdefqivssshddtiLIWDFLnysetpiqggggggpppsgpsiennWRMGKFLLQRIncrsenskgvyclqyddhkivsglrdntIKVWDRVSLQCIKVLtghtgsvlclqyderviisgssdstvrvwdvNTGEMVNTLIHHCEAVLHLrfsngmmvtcskDRSIAvwdmvspneiTLRRVLVGHRAavnvvdfdeKYIVSASGDRTIKVWNTSSCEFVRTlnghkrgiaCLQYRdrlvvsgssdntirLWDIECGACLRVLEGHEELVRCIRFDakrivsgaydgKIKVWNLVaaldpraptttLCLRTLVVSI
Flexible Loop (DISEMBL)
mtilydpnrkkepapqfaseKEMCPYLTIsvssaspqlpPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLvvsgssdntiryrdefqivssshdDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIisgssdstvrvWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAavnvvdfdekyivsasgdrtikvwNTSSCEFVRTLNGHKRGIACLQYRDRLVvsgssdntirlWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVaaldpraptttlclrtlvvsi
Low Complexity Region (SEG)
MTILYDPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQggggggpppsgpsIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVSI
Disordered region (IsUnstruct)
*************************YL**********************************EMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNY**********************NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVV**
Disordered Region (DISOPRED)
MTILY*********************************************************MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVSI
Disordered Region (DISEMBL)
MTILYDPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPI*********PSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVSI
Disordered Region (DISPRO)
*TILYDPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVSI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTILYDPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	486	2.2.26 [Sep-21-2011]
Q9Y297	605	F-box/WD repeat-containin	no	N/A	0.853	0.685	0.660	1e-167
Q9UKB1	542	F-box/WD repeat-containin	no	N/A	0.849	0.761	0.660	1e-166
Q91854	518	Beta-TrCP OS=Xenopus laev	N/A	N/A	0.921	0.864	0.623	1e-166
Q5SRY7	542	F-box/WD repeat-containin	yes	N/A	0.849	0.761	0.660	1e-166
Q3ULA2	605	F-box/WD repeat-containin	no	N/A	0.853	0.685	0.656	1e-165
Q09990	665	F-box/WD repeat-containin	yes	N/A	0.899	0.657	0.552	1e-139
Q09855	506	F-box/WD repeat-containin	yes	N/A	0.516	0.496	0.410	7e-53
Q9VZF4	1326	F-box/WD repeat-containin	no	N/A	0.790	0.289	0.303	4e-50
Q8VBV4	629	F-box/WD repeat-containin	no	N/A	0.808	0.624	0.293	4e-48
Q969H0	707	F-box/WD repeat-containin	no	N/A	0.773	0.531	0.300	5e-48

>sp|Q9Y297|FBW1A_HUMAN F-box/WD repeat-containing protein 1A OS=Homo sapiens GN=BTRC PE=1 SV=1

 Score =  588 bits (1515), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 298/451 (66%), Positives = 349/451 (77%), Gaps = 36/451 (7%)

Query: 49  RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFI 108
           ++++ +  +  EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRDFI
Sbjct: 122 KQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFI 181

Query: 109 SLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
           + LP    +   + I+S    +++        E+ R  +    G+   +  +R+V + S 
Sbjct: 182 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSD---GMLWKKLIERMVRTDSL 238

Query: 165 DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG------------PS 212
              +  R  +               +L  ++ P     G  PP S              +
Sbjct: 239 WRGLAERRGWG-------------QYLFKNKPP----DGNAPPNSFYRALYPKIIQDIET 281

Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
           IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 341

Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
           HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
           DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
           LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Recognizes and binds to phosphorylated target proteins. SCF(BTRC) mediates the ubiquitination of CTNNB1 and participates in Wnt signaling. SCF(BTRC) mediates the ubiquitination of NFKBIA, NFKBIB and NFKBIE; the degradation frees the associated NFKB1 to translocate into the nucleus and to activate transcription. Ubiquitination of NFKBIA occurs at 'Lys-21' and 'Lys-22'. SCF(BTRC) mediates the ubiquitination of phosphorylated NFKB1/nuclear factor NF-kappa-B p105 subunit, ATF4, SMAD3, SMAD4, CDC25A, DLG1, FBXO5 and probably NFKB2. SCF(BTRC) mediates the ubiquitination of phosphorylated SNAI1. May be involved in ubiquitination and subsequent proteasomal degradation through a DBB1-CUL4 E3 ubiquitin-protein ligase. Required for activation of NFKB-mediated transcription by IL1B, MAP3K14, MAP3K1, IKBKB and TNF. Required for proteolytic processing of GLI3.
Homo sapiens (taxid: 9606)

>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11 PE=1 SV=1

 Score =  584 bits (1505), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 299/453 (66%), Positives = 346/453 (76%), Gaps = 40/453 (8%)

Query: 48  NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
           +RK+     +  EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 60  SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 119

Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS--- 164
           I+ LP     +I            N  S    R+L   +  + C +++ R++  G     
Sbjct: 120 ITALPEQGLDHIAE----------NILSYLDARSLCAAE--LVCKEWQ-RVISEGMLWKK 166

Query: 165 --DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG------------ 210
             +  +R    ++ +S         WD   +   P  G     PP S             
Sbjct: 167 LIERMVRTDPLWKGLSERRG-----WDQYLFKNRPTDG-----PPNSFYRSLYPKIIQDI 216

Query: 211 PSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL 270
            +IE+NWR G+  LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVL
Sbjct: 217 ETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVL 276

Query: 271 TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTC 330
           TGHTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTC
Sbjct: 277 TGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC 336

Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFV 390
           SKDRSIAVWDM S  +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFV
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 396

Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI 450
           RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRI
Sbjct: 397 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 456

Query: 451 VSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           VSGAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 489

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. SCF(FBXW11) mediates the ubiquitination of CTNNB1 and participates in Wnt signaling. SCF(FBXW11) mediates the ubiquitination of phosphorylated NFKBIA, which degradation frees the associated NFKB1 to translocate into the nucleus and to activate transcription. SCF(FBXW11) mediates the ubiquitination of IFNAR1. Targets phosphorylation-dependent degradation of beta-catenin. Involved in the oxidative stress-induced a ubiquitin-mediated decrease in RCAN1. Mediates the degradation of CDC25A induced by ionizing radiation in cells progressing through S phase and thus may function in the intra-S-phase checkpoint. Has an essential role in the control of the clock-dependent transcription via degradation of PER1 and phosphorylated PER2. Is target of human immunodeficiency virus type 1 (HIV-1) protein VPU to polyubiquitinate and deplete BST2 from cells and antagonize its antiviral action.

Homo sapiens (taxid: 9606)

>sp|Q91854|TRCB_XENLA Beta-TrCP OS=Xenopus laevis GN=fbxw1 PE=2 SV=1

 Score =  584 bits (1505), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 308/494 (62%), Positives = 363/494 (73%), Gaps = 46/494 (9%)

Query: 6   DPNRKKEPAPQFASEKEMCPYLTISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCF 65
           D NR  EP  +  +EK       ++  ++S  +P         ++++ +  +  EKE+C 
Sbjct: 18  DCNRD-EPPRKIITEKNTLRQTKLANGTSSMIVP---------KQRKLSANYEKEKELCV 67

Query: 66  KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLP----NFDEKYIVS 121
           KYF++WSE DQ++FVE+L+SRMCHYQHGHINTYLKPMLQRDFI+ LP    +   + I+S
Sbjct: 68  KYFEQWSECDQVEFVEHLISRMCHYQHGHINTYLKPMLQRDFITALPARGLDHIAENILS 127

Query: 122 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH 181
               +++        E+ R  +    G+   +  +R+V + S    +  R  +       
Sbjct: 128 YLDAKSLCSAELVCKEWYRVTSD---GMLWKKLIERMVRTDSLWRGLAERRGWG------ 178

Query: 182 DDTILIWDFLNYSETPIQGGGGGGPPPSG------------PSIENNWRMGKFLLQRINC 229
                   +L  ++ P     G  PP S              +IE+NWR G+  LQRI+C
Sbjct: 179 -------QYLFKNKPP----DGKTPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHC 227

Query: 230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS 289
           RSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C +VL GHTGSVLCLQYDERVII+
Sbjct: 228 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRVLMGHTGSVLCLQYDERVIIT 287

Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL 349
           GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSKDRSIAVWDM S  +ITL
Sbjct: 288 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASATDITL 347

Query: 350 RRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL 409
           RRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRL
Sbjct: 348 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRL 407

Query: 410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALD 469
           VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVSGAYDGKIKVW+LVAALD
Sbjct: 408 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALD 467

Query: 470 PRAPTTTLCLRTLV 483
           PRAP  TLCLRTLV
Sbjct: 468 PRAPAGTLCLRTLV 481

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. May participate in Wnt signaling.

Xenopus laevis (taxid: 8355)

>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11 PE=1 SV=1

 Score =  583 bits (1503), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 299/453 (66%), Positives = 346/453 (76%), Gaps = 40/453 (8%)

Query: 48  NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
           +RK+     +  EK++C KYFD+WSE DQ++FVE+L+SRMCHYQHGHIN+YLKPMLQRDF
Sbjct: 60  SRKRPSEGNYQKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDF 119

Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS--- 164
           I+ LP     +I            N  S    R+L   +  + C +++ R++  G     
Sbjct: 120 ITALPEQGLDHIAE----------NILSYLDARSLCAAE--LVCKEWQ-RVISEGMLWKK 166

Query: 165 --DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG------------ 210
             +  +R    ++ +S         WD   +   P  G     PP S             
Sbjct: 167 LIERMVRTDPLWKGLSERRG-----WDQYLFKNRPTDG-----PPNSFYRSLYPKIIQDI 216

Query: 211 PSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL 270
            +IE+NWR G+  LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVL
Sbjct: 217 ETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVL 276

Query: 271 TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTC 330
           TGHTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTC
Sbjct: 277 TGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTC 336

Query: 331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFV 390
           SKDRSIAVWDM S  +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFV
Sbjct: 337 SKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 396

Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI 450
           RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRI
Sbjct: 397 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRI 456

Query: 451 VSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           VSGAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct: 457 VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLV 489

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. SCF(FBXW11) mediates the ubiquitination of CTNNB1 and participates in Wnt signaling. Mediates also the ubiquitination of IFNAR1 and targets phosphorylation-dependent degradation of beta-catenin. Involved in the oxidative stress-induced ubiquitin-mediated decrease of RCAN1. Promotes the degradation of CDC25A induced by ionizing radiation in cells progressing through S phase and thus may function in the intra-S-phase checkpoint (By similarity). Involved in the ubiquitination of phosphorylated NFKBIA, which degradation frees the associated NFKB1 to translocate into the nucleus and to activate transcription. Has an essential role in the control of the clock-dependent transcription via degradation of PER1 and phosphorylated PER2.

Mus musculus (taxid: 10090)

>sp|Q3ULA2|FBW1A_MOUSE F-box/WD repeat-containing protein 1A OS=Mus musculus GN=Btrc PE=1 SV=2

 Score =  581 bits (1498), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/451 (65%), Positives = 348/451 (77%), Gaps = 36/451 (7%)

Query: 49  RKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFI 108
           ++++ +  +  EKE+C KYF++WSE DQ++FVE+L+S+MCHYQHGHIN+YLKPMLQRDFI
Sbjct: 122 KQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDFI 181

Query: 109 SLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS 164
           + LP    +   + I+S    +++        E+ R  +    G+   +  +R+V + S 
Sbjct: 182 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSD---GMLWKKLIERMVRTDSL 238

Query: 165 DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG-----PSI------ 213
              +  R  +               +L  ++ P +      PP S      P I      
Sbjct: 239 WRGLAERRGWG-------------QYLFKNKPPDE----NAPPNSFYRALYPKIIQDIET 281

Query: 214 -ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
            E+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341

Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
           HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
           DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
           LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           GAYDGKIKVW+L+AALDPRAP  TLCLRTLV
Sbjct: 522 GAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Recognizes and binds to phosphorylated target proteins. SCF(BTRC) mediates the ubiquitination of CTNNB1 and participates in Wnt signaling. SCF(BTRC) mediates the ubiquitination of NFKBIA, NFKBIB and NFKBIE; the degradation frees the associated NFKB1 to translocate into the nucleus and to activate transcription. Ubiquitination of NFKBIA occurs at 'Lys-21' and 'Lys-22'. SCF(BTRC) mediates the ubiquitination of phosphorylated NFKB1/nuclear factor NF-kappa-B p105 subunit, ATF4, SMAD3, SMAD4, CDC25A, DLG1, FBXO5 and probably NFKB2. SCF(BTRC) mediates the ubiquitination of phosphorylated SNAI1. May be involved in ubiquitination and subsequent proteasomal degradation through a DBB1-CUL4 E3 ubiquitin-protein ligase. Required for activation of NFKB-mediated transcription by IL1B, MAP3K14, MAP3K1, IKBKB and TNF. Required for proteolytic processing of GLI3.

Mus musculus (taxid: 10090)

>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans GN=lin-23 PE=1 SV=2

 Score =  494 bits (1273), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/480 (55%), Positives = 331/480 (68%), Gaps = 43/480 (8%)

Query: 32  SSASPQLPPMTILYDPNRKKEP-APQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHY 90
           +S + QL  +++    + + +P +  +    E   +   KWSE +Q+DF++ ++ R+ HY
Sbjct: 7   ASTTQQLADLSLTEGEHDEGKPLSIDYLQGHEGLIEEVLKWSEHEQLDFMDKIVHRLSHY 66

Query: 91  QHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 150
           Q G ++ +++PMLQRDFIS LP    + I+      ++K     SCE V T    +  +A
Sbjct: 67  QLGKVDNFIRPMLQRDFISNLPAHLVELILFNVNSDSLK-----SCEEVST--SWRCALA 119

Query: 151 CLQYRDRLV----------------------VSGSSDNTIR-----YRDEFQIVSSSHDD 183
             Q+  +L+                      ++ S D ++R     +  +  I     D 
Sbjct: 120 RGQHWKKLIEKNVRSDSLWWGLSEKRQWDKFLNISRDMSVRRICEKFNYDVNIKRDKLDQ 179

Query: 184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD 243
            IL+  F +     I             +I+NNW+ G + + RINC+SENSKGVYCLQYD
Sbjct: 180 LILMHVFYSKLYPKI--------IRDIHNIDNNWKRGNYKMTRINCQSENSKGVYCLQYD 231

Query: 244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT 303
           D KIVSGLRDNTIK+WDR    C ++L+GHTGSVLCLQYD RVIISGSSD+TVRVWDV T
Sbjct: 232 DDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVET 291

Query: 304 GEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
           GE + TLIHHCEAVLHLRF+NG+MVTCSKDRSIAVWDMVSP +IT+RRVLVGHRAAVNVV
Sbjct: 292 GECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVV 351

Query: 364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD 423
           DFD++YIVSASGDRTIKVW+  + EFVRTL GH+RGIACLQYR RLVVSGSSDNTIRLWD
Sbjct: 352 DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWD 411

Query: 424 IECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           I  G CLRVLEGHEELVRCIRFD KRIVSGAYDGKIKVW+L AALDPRA ++ +CL +LV
Sbjct: 412 IHSGVCLRVLEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLV 471

Functions cell autonomously to negatively regulate cell cycle progression. Required to restrain cell proliferation in response to developmental cues. Probably recognizes and binds to some proteins and promotes their ubiquitination and degradation.

Caenorhabditis elegans (taxid: 6239)

>sp|Q09855|POF11_SCHPO F-box/WD repeat-containing protein pof11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof11 PE=1 SV=2

 Score =  208 bits (530), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 110/268 (41%), Positives = 164/268 (61%), Gaps = 17/268 (6%)

Query: 213 IENNWRMGKFLLQRINCRS----------ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV 262
           +++NWR G+FL+   N  S               VYC+QYDD  +VSG +D T+ VWD  
Sbjct: 190 LDSNWRHGRFLVSTFNNPSIRFPADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVN 249

Query: 263 SLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL 320
           S   +  L GH+GSVLCL +  R  +++SGSSDST+ +WD      +     H + VL +
Sbjct: 250 SRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGV 309

Query: 321 RFSNGMMVTCSKDRSIAVW--DMVSPNEITLRRVLVGHRAAVNVVDFDEK--YIVSASGD 376
             S   +++ S+D +  VW  D  SP E  +  VL GH A+VN V +  K   IV+AS D
Sbjct: 310 VVSENYIISSSRDHTARVWRLDATSPAEACMH-VLRGHLASVNSVQYSSKTGLIVTASSD 368

Query: 377 RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
           RT++ W+ ++   +R ++ H+RGIAC QY  + +VSGSSD TIR+++   G  LR+L+GH
Sbjct: 369 RTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGH 428

Query: 437 EELVRCIRFDAKRIVSGAYDGKIKVWNL 464
           E+L+R +RF+ ++IVSG YDG +++WN 
Sbjct: 429 EDLIRTVRFNDEKIVSGGYDGTVRIWNF 456

Has a role in meiosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1

 Score =  199 bits (506), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 214/448 (47%), Gaps = 64/448 (14%)

Query: 47   PNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRD 106
            P+R   P      E +     F +WS  +++  ++ L+      Q  H+   ++P  QRD
Sbjct: 836  PSRDNPPP-----ELQHWLAQFQRWSHVERLLALDRLIDHCDPSQVRHMMKVIEPQFQRD 890

Query: 107  FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN 166
            FISLLP     +++S                ++   +  +    C  +R         D+
Sbjct: 891  FISLLPRELALFVLS----------------YLEPKDLLRAAQTCRSWRFLC------DD 928

Query: 167  TIRYRDE---FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGP---------SIE 214
             + ++++    QI++    D             P +G  G  PP + P          IE
Sbjct: 929  NLLWKEKCRKAQILAEPRSDR------------PKRGRDGNMPPIASPWKAAYMRQHIIE 976

Query: 215  NNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT 274
             NWR       ++  +  +   + CLQ+  ++IVSG  DNT+KVW  V+ +C++ L GHT
Sbjct: 977  MNWRSRPVRKPKV-LKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHT 1035

Query: 275  GSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDR 334
            G V   Q    +IISGS+D T++VWD+++G  V+TL  H   V  +      +V+ S+D 
Sbjct: 1036 GGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDA 1095

Query: 335  SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
            ++ VWD+    + +   VLVGH AAV  V +D K IVS + D  +K+W+    E + TL 
Sbjct: 1096 TLRVWDI---EQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQ 1152

Query: 395  GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA 454
            GH   +  LQ+    VVSGS D +IR+WD+E G C   L GH+ L   +      +VSG 
Sbjct: 1153 GHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGN 1212

Query: 455  YDGKIKVWNLVAALDPRAPTTTLCLRTL 482
             D  +KVW++         TT  CL+TL
Sbjct: 1213 ADSTVKVWDI---------TTGQCLQTL 1231

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins (By similarity). Involved in the degradation of cyclin E and dm/Myc. Required for endocycles, but not mitosis in follicle cell epithelium.

Drosophila melanogaster (taxid: 7227)

>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1 SV=1

 Score =  192 bits (489), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 216/439 (49%), Gaps = 46/439 (10%)

Query: 48  NRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDF 107
            R++  + Q  +  +   K F  WS  +++  ++ L+      Q  H+   ++P  QRDF
Sbjct: 143 QRRRITSVQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDF 202

Query: 108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT 167
           ISLLP     Y++S    + + +    +C + R L                     +++ 
Sbjct: 203 ISLLPKELALYVLSFLEPKDL-LQAAQTCRYWRIL---------------------AEDN 240

Query: 168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG----PSIENNWRMGKFL 223
           + +R++ +      D+ + I          I+ G    P  S       I+ NWR G+  
Sbjct: 241 LLWREKCK--EEGIDEPLHI-----KRRKIIKPGFIHSPWKSAYIRQHRIDTNWRRGELK 293

Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
             ++  +  +   + CLQ+  ++IVSG  DNT+KVW  V+ +C++ L GHTG V   Q  
Sbjct: 294 SPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR 352

Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS 343
           + +IISGS+D T++VW+  TGE ++TL  H   V  +      +V+ S+D ++ VWD+ +
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 412

Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
              +    VL+GH AAV  V +D + +VS + D  +KVW+  +   + TL GH   +  L
Sbjct: 413 GQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469

Query: 404 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
           Q+    VVSGS D +IR+WD+E G C+  L GH+ L   +      +VSG  D  +K+W+
Sbjct: 470 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWD 529

Query: 464 LVAALDPRAPTTTLCLRTL 482
           +          T  CL+TL
Sbjct: 530 I---------KTGQCLQTL 539

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. Involved in the degradation of cyclin-E, MYC, NOTCH1 released notch intracellular domain (NICD), and probably PSEN1.

Mus musculus (taxid: 10090)

>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1

 Score =  192 bits (488), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 209/422 (49%), Gaps = 46/422 (10%)

Query: 65  FKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASG 124
            K F  WS  +++  ++ L+      Q  H+   ++P  QRDFISLLP     Y++S   
Sbjct: 238 LKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLE 297

Query: 125 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT 184
            + + +    +C + R L                     +++ + +R++ +      D+ 
Sbjct: 298 PKDL-LQAAQTCRYWRIL---------------------AEDNLLWREKCK--EEGIDEP 333

Query: 185 ILIWDFLNYSETPIQGGGGGGPPPSG----PSIENNWRMGKFLLQRINCRSENSKGVYCL 240
           + I          I+ G    P  S       I+ NWR G+    ++  +  +   + CL
Sbjct: 334 LHI-----KRRKVIKPGFIHSPWKSAYIRQHRIDTNWRRGELKSPKV-LKGHDDHVITCL 387

Query: 241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWD 300
           Q+  ++IVSG  DNT+KVW  V+ +C++ L GHTG V   Q  + +IISGS+D T++VW+
Sbjct: 388 QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWN 447

Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
             TGE ++TL  H   V  +      +V+ S+D ++ VWD+ +   +    VL+GH AAV
Sbjct: 448 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL---HVLMGHVAAV 504

Query: 361 NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 420
             V +D + +VS + D  +KVW+  +   + TL GH   +  LQ+    VVSGS D +IR
Sbjct: 505 RCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIR 564

Query: 421 LWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           +WD+E G C+  L GH+ L   +      +VSG  D  +K+W++          T  CL+
Sbjct: 565 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI---------KTGQCLQ 615

Query: 481 TL 482
           TL
Sbjct: 616 TL 617

Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. Involved in the degradation of cyclin-E, MYC, NOTCH1 released notch intracellular domain (NICD), and probably PSEN1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	486
195451131	512	GK13501 [Drosophila willistoni] gi|19416	0.886	0.841	0.673	1e-172
195152029	507	GL22031 [Drosophila persimilis] gi|19845	0.886	0.850	0.668	1e-172
17738089	510	supernumerary limbs, isoform A [Drosophi	0.886	0.845	0.668	1e-171
194899574	510	GG14860 [Drosophila erecta] gi|190651037	0.886	0.845	0.666	1e-171
442620260	597	supernumerary limbs, isoform B [Drosophi	0.876	0.713	0.657	1e-171
195569257	510	GD20006 [Drosophila simulans] gi|1941985	0.886	0.845	0.666	1e-171
195355572	510	GM15099 [Drosophila sechellia] gi|194129	0.886	0.845	0.666	1e-170
194744891	510	GF18514 [Drosophila ananassae] gi|190627	0.886	0.845	0.662	1e-170
289742679	510	beta-TRCP/Slimb protein [Glossina morsit	0.903	0.860	0.678	1e-170
2853610	510	Slimb [Drosophila melanogaster]	0.886	0.845	0.666	1e-170

>gi|195451131|ref|XP_002072781.1| GK13501 [Drosophila willistoni] gi|194168866|gb|EDW83767.1| GK13501 [Drosophila willistoni]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 315/468 (67%), Positives = 359/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           S+++ Q    T+LYDP RKK+ +P + +E+E+CF+YF +WSE  Q+DFVE LLSRMCHYQ
Sbjct: 15  SNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSETGQVDFVEQLLSRMCHYQ 74

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 75  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSAELVCKEWLRVIS---E 131

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 132 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 173

Query: 208 PS-----GPSI-------ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I       ENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 174 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 233

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K LTGHTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCE
Sbjct: 234 IKIWDRTGLQCVKTLTGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 293

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 294 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 353

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 354 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 413

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 414 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 461

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195152029|ref|XP_002016941.1| GL22031 [Drosophila persimilis] gi|198453445|ref|XP_002137670.1| GA27349 [Drosophila pseudoobscura pseudoobscura] gi|194111998|gb|EDW34041.1| GL22031 [Drosophila persimilis] gi|198132361|gb|EDY68228.1| GA27349 [Drosophila pseudoobscura pseudoobscura]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 313/468 (66%), Positives = 359/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+E+CF+YF +WSE  Q+DFVE LLSRMCHYQ
Sbjct: 10  TNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEQLLSRMCHYQ 69

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 70  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYVDAESLKSAELVCKEWLRVIS---E 126

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 127 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 168

Query: 208 PS-----GPSI-------ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I       ENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 169 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 228

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K LTGHTGSVLCLQYD++VIISGSSDSTVRVWDVNTG+MVNTLIHHCE
Sbjct: 229 IKIWDRTDLQCVKTLTGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGDMVNTLIHHCE 288

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 289 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 348

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 349 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 408

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 409 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 456

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|17738089|ref|NP_524430.1| supernumerary limbs, isoform A [Drosophila melanogaster] gi|442620258|ref|NP_001262801.1| supernumerary limbs, isoform C [Drosophila melanogaster] gi|7300706|gb|AAF55853.1| supernumerary limbs, isoform A [Drosophila melanogaster] gi|7530435|gb|AAF63213.1| Slimb [Drosophila melanogaster] gi|7530437|gb|AAF63214.1| Slimb [Drosophila melanogaster] gi|21430160|gb|AAM50758.1| LD08669p [Drosophila melanogaster] gi|220943462|gb|ACL84274.1| slmb-PA [synthetic construct] gi|220953488|gb|ACL89287.1| slmb-PA [synthetic construct] gi|440217705|gb|AGB96181.1| supernumerary limbs, isoform C [Drosophila melanogaster]

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 313/468 (66%), Positives = 359/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+E+CF+YF +WSE  Q+DFVE+LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 130 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 171

Query: 208 PS-----GPSI-------ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I       ENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 172 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 231

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCE
Sbjct: 232 IKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 291

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 292 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 351

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 352 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 411

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 412 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194899574|ref|XP_001979334.1| GG14860 [Drosophila erecta] gi|190651037|gb|EDV48292.1| GG14860 [Drosophila erecta]

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 312/468 (66%), Positives = 358/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+E+CF+YF +WSE  Q+DFVE+LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSAELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 130 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 171

Query: 208 PS-----GPSI-------ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I       ENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 172 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 231

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDV TGEMVNTLIHHCE
Sbjct: 232 IKIWDRTDLQCVKTLIGHTGSVLCLQYDDKVIISGSSDSTVRVWDVKTGEMVNTLIHHCE 291

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 292 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 351

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 352 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 411

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 412 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442620260|ref|NP_001262802.1| supernumerary limbs, isoform B [Drosophila melanogaster] gi|440217706|gb|AGB96182.1| supernumerary limbs, isoform B [Drosophila melanogaster]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 311/473 (65%), Positives = 357/473 (75%), Gaps = 47/473 (9%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+E+CF+YF +WSE  Q+DFVE+LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFL----NYSETPIQGGGG 203
           G+   +  +R V + S                       +W  L    N+ +   +   G
Sbjct: 130 GMLWKKLIERKVRTDS-----------------------LWRGLAERRNWMQYLFKPRPG 166

Query: 204 GGPPPSG------PSIEN-------NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250
               P        P I N       NWR G+ +L+RINCRSENSKGVYCLQYDD KIVSG
Sbjct: 167 QTQRPHSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSG 226

Query: 251 LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
           LRDNTIK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTL
Sbjct: 227 LRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTL 286

Query: 311 IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI 370
           IHHCEAVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYI
Sbjct: 287 IHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYI 346

Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 430
           VSASGDRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACL
Sbjct: 347 VSASGDRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACL 406

Query: 431 RVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           RVLEGHEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 407 RVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195569257|ref|XP_002102627.1| GD20006 [Drosophila simulans] gi|194198554|gb|EDX12130.1| GD20006 [Drosophila simulans]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 312/468 (66%), Positives = 359/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+++CF+YF +WSE  Q+DFVE+LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPNYQTERDLCFQYFIQWSESGQVDFVEHLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 130 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 171

Query: 208 PS-----GPSI-------ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I       ENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 172 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 231

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCE
Sbjct: 232 IKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 291

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 292 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 351

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 352 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 411

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 412 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195355572|ref|XP_002044265.1| GM15099 [Drosophila sechellia] gi|194129566|gb|EDW51609.1| GM15099 [Drosophila sechellia]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/468 (66%), Positives = 358/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + SE+++CF+YF +WSE  Q+DFVE+LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPTYQSERDLCFQYFTQWSESGQVDFVEHLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSSELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 130 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 171

Query: 208 PS-----GPSIEN-------NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I N       NWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 172 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 231

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCE
Sbjct: 232 IKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 291

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 292 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 351

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 352 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 411

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 412 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194744891|ref|XP_001954926.1| GF18514 [Drosophila ananassae] gi|190627963|gb|EDV43487.1| GF18514 [Drosophila ananassae]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 310/468 (66%), Positives = 358/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+++CF+YF +W+E  Q+DFVE LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPTYQTERDLCFQYFTQWTEAGQVDFVEQLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP----NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    +   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIAENILSYLDAESLKSAELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 130 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 171

Query: 208 PS-----GPSI-------ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I       ENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 172 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 231

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDVN+GEMVNTLIHHCE
Sbjct: 232 IKIWDRTDLQCVKTLIGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNSGEMVNTLIHHCE 291

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 292 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 351

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 352 DRTIKVWSTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 411

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 412 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289742679|gb|ADD20087.1| beta-TRCP/Slimb protein [Glossina morsitans morsitans]

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/460 (67%), Positives = 353/460 (76%), Gaps = 21/460 (4%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKKE +P F  E+E C  YF +W+E DQ+DFVE LLSRMCHYQ
Sbjct: 13  TNSNAQPFTSTMLYDPVRKKESSPTFQVERETCLTYFSQWNEADQVDFVEQLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISL-----LPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 146
           HGHI+ +LKPMLQRDFISL     L +  E  +     D ++K       E++R ++   
Sbjct: 73  HGHIDAFLKPMLQRDFISLLPKKGLDHIAENILAYLDAD-SLKAAELVCKEWLRVIS--- 128

Query: 147 RGIACLQYRDRLVVSGSS-DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGG 205
            G+   +  +R V + S        R   Q +      T         +  P        
Sbjct: 129 EGMLWKKLIERKVRTDSLWRGLAERRGWIQYLFKPRPGT---------THRPHSFYRALF 179

Query: 206 PPPSG--PSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS 263
           P       SIENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNTIKVWDR  
Sbjct: 180 PKIMNDIESIENNWRTGRHMLRRINCRSENSKGVYCLQYDDVKIVSGLRDNTIKVWDRTD 239

Query: 264 LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
           LQC+K LTGHTGSVLCLQYD++VIISGSSDSTVRVWDVN+GEMVNTLIHHCEAVLHLRF+
Sbjct: 240 LQCVKTLTGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNSGEMVNTLIHHCEAVLHLRFN 299

Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
           NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW+
Sbjct: 300 NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWS 359

Query: 384 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
           TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEGHEELVRCI
Sbjct: 360 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCI 419

Query: 444 RFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           RFD+KRIVSGAYDGKIKVW+LVAALDPRA + +LCL TLV
Sbjct: 420 RFDSKRIVSGAYDGKIKVWDLVAALDPRAQSNSLCLNTLV 459

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|2853610|gb|AAC38852.1| Slimb [Drosophila melanogaster]

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/468 (66%), Positives = 358/468 (76%), Gaps = 37/468 (7%)

Query: 32  SSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQ 91
           ++++ Q    T+LYDP RKK+ +P + +E+E+CF+YF +WSE  Q+DFVE+LLSRMCHYQ
Sbjct: 13  TNSNAQAFTTTMLYDPVRKKDSSPTYQTERELCFQYFTQWSESGQVDFVEHLLSRMCHYQ 72

Query: 92  HGHINTYLKPMLQRDFISLLP--NFDE--KYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 147
           HG IN YLKPMLQRDFI+LLP    D   + I+S     ++K       E++R ++    
Sbjct: 73  HGQINAYLKPMLQRDFITLLPIKGLDHIGENILSYLDAESLKSSELVCKEWLRVIS---E 129

Query: 148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
           G+   +  +R V + S    +  R                 +++ Y   P    G    P
Sbjct: 130 GMLWKKLIERKVRTDSLWRGLAERR----------------NWMQYLFKP--RPGQTQRP 171

Query: 208 PS-----GPSIEN-------NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
            S      P I N       NWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNT
Sbjct: 172 HSFHRELFPKIMNDIDSIENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNT 231

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           IK+WDR  LQC+K L GHTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCE
Sbjct: 232 IKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 291

Query: 316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
           AVLHLRF+NGMMVTCSKDRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASG
Sbjct: 292 AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASG 351

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG 435
           DRTIKVW+TS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEG
Sbjct: 352 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEG 411

Query: 436 HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           HEELVRCIRFD KRIVSGAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct: 412 HEELVRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	486
FB|FBgn0023423	510	slmb "supernumerary limbs" [Dr	0.557	0.531	0.904	8.3e-164
UNIPROTKB|F1NYG1	605	BTRC "Uncharacterized protein"	0.557	0.447	0.892	1.4e-160
UNIPROTKB|Q68DS0	564	DKFZp781N011 "Putative unchara	0.557	0.480	0.896	2.3e-160
UNIPROTKB|E2RDC4	605	BTRC "Uncharacterized protein"	0.557	0.447	0.896	3.3e-158
UNIPROTKB|F1MVN1	569	BTRC "Uncharacterized protein"	0.557	0.476	0.896	3.3e-158
UNIPROTKB|Q9Y297	605	BTRC "F-box/WD repeat-containi	0.557	0.447	0.896	4.2e-158
UNIPROTKB|F1S8U2	506	BTRC "Uncharacterized protein"	0.557	0.535	0.892	4.2e-158
UNIPROTKB|F1P5E8	515	FBXW11 "Uncharacterized protei	0.557	0.526	0.885	8.8e-158
MGI|MGI:1338871	605	Btrc "beta-transducin repeat c	0.557	0.447	0.889	2.3e-157
UNIPROTKB|F1LMH8	605	Btrc "Protein Btrc" [Rattus no	0.557	0.447	0.889	2.3e-157

FB|FBgn0023423 slmb "supernumerary limbs" [Drosophila melanogaster (taxid:7227)]

 Score = 1321 (470.1 bits), Expect = 8.3e-164, Sum P(2) = 8.3e-164
 Identities = 245/271 (90%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IENNWR G+ +L+RINCRSENSKGVYCLQYDD KIVSGLRDNTIK+WDR  LQC+K L G
Sbjct:   189 IENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMG 248

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYD++VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   249 HTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSK 308

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP+EITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW+TS+CEFVRT
Sbjct:   309 DRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRT 368

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDN+IRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   369 LNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKRIVS 428

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+LVAALDPRA + TLCL TLV
Sbjct:   429 GAYDGKIKVWDLVAALDPRAASNTLCLNTLV 459

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IMP

GO:0030111 "regulation of Wnt receptor signaling pathway" evidence=IMP;TAS

GO:0008588 "release of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS

GO:0008589 "regulation of smoothened signaling pathway" evidence=TAS

GO:0000151 "ubiquitin ligase complex" evidence=ISS

GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS

GO:0030512 "negative regulation of transforming growth factor beta receptor signaling pathway" evidence=NAS

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IMP;NAS

GO:0019005 "SCF ubiquitin ligase complex" evidence=NAS;TAS

GO:0006508 "proteolysis" evidence=IMP

GO:0045475 "locomotor rhythm" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IMP;IPI

GO:0007611 "learning or memory" evidence=IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0030162 "regulation of proteolysis" evidence=TAS

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0030708 "germarium-derived female germ-line cyst encapsulation" evidence=IMP

GO:0046843 "dorsal appendage formation" evidence=IMP

GO:0030720 "oocyte localization involved in germarium-derived egg chamber formation" evidence=IMP

GO:0007088 "regulation of mitosis" evidence=IMP

GO:0030727 "germarium-derived female germ-line cyst formation" evidence=IMP

GO:0045849 "negative regulation of nurse cell apoptotic process" evidence=IMP

GO:0030707 "ovarian follicle cell development" evidence=IMP

GO:0007293 "germarium-derived egg chamber formation" evidence=IMP

GO:0030713 "ovarian follicle cell stalk formation" evidence=IMP

GO:0007304 "chorion-containing eggshell formation" evidence=IMP

GO:0051219 "phosphoprotein binding" evidence=IPI

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0046599 "regulation of centriole replication" evidence=IDA

GO:0060253 "negative regulation of glial cell proliferation" evidence=IGI

UNIPROTKB|F1NYG1 BTRC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1304 (464.1 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
 Identities = 242/271 (89%), Positives = 258/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 341

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct:   522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA

GO:0031648 "protein destabilization" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0042753 "positive regulation of circadian rhythm" evidence=IEA

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0045309 "protein phosphorylated amino acid binding" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

GO:0071407 "cellular response to organic cyclic compound" evidence=IEA

UNIPROTKB|Q68DS0 DKFZp781N011 "Putative uncharacterized protein DKFZp781N011" [Homo sapiens (taxid:9606)]

 Score = 1309 (465.8 bits), Expect = 2.3e-160, Sum P(3) = 2.3e-160
 Identities = 243/271 (89%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   241 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 300

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   301 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 360

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   361 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 420

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   421 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 480

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct:   481 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 511

GO:0046983 "protein dimerization activity" evidence=IEA

UNIPROTKB|E2RDC4 BTRC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1310 (466.2 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
 Identities = 243/271 (89%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct:   522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552

GO:0071407 "cellular response to organic cyclic compound" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0045309 "protein phosphorylated amino acid binding" evidence=IEA

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042753 "positive regulation of circadian rhythm" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031648 "protein destabilization" evidence=IEA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

UNIPROTKB|F1MVN1 BTRC "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1310 (466.2 bits), Expect = 3.3e-158, Sum P(2) = 3.3e-158
 Identities = 243/271 (89%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   246 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 305

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   306 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 365

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   366 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 425

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   426 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 485

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct:   486 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 516

GO:0071407 "cellular response to organic cyclic compound" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0045309 "protein phosphorylated amino acid binding" evidence=IEA

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042753 "positive regulation of circadian rhythm" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031648 "protein destabilization" evidence=IEA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

UNIPROTKB|Q9Y297 BTRC "F-box/WD repeat-containing protein 1A" [Homo sapiens (taxid:9606)]

 Score = 1309 (465.8 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
 Identities = 243/271 (89%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 341

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct:   522 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 552

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0042753 "positive regulation of circadian rhythm" evidence=IEA

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0045309 "protein phosphorylated amino acid binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

GO:0071407 "cellular response to organic cyclic compound" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IMP

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IDA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA

GO:0031648 "protein destabilization" evidence=IMP

GO:0016567 "protein ubiquitination" evidence=IDA

GO:0045862 "positive regulation of proteolysis" evidence=IMP

GO:0007165 "signal transduction" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0031145 "anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process" evidence=TAS

GO:0051437 "positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0051439 "regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle" evidence=TAS

GO:0043433 "negative regulation of sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0045879 "negative regulation of smoothened signaling pathway" evidence=TAS

UNIPROTKB|F1S8U2 BTRC "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1309 (465.8 bits), Expect = 4.2e-158, Sum P(2) = 4.2e-158
 Identities = 242/271 (89%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   183 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 242

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   243 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 302

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   303 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 362

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   363 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 422

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+L+AALDPRAP  TLCLRTLV
Sbjct:   423 GAYDGKIKVWDLIAALDPRAPAGTLCLRTLV 453

GO:0071407 "cellular response to organic cyclic compound" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0045309 "protein phosphorylated amino acid binding" evidence=IEA

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0042753 "positive regulation of circadian rhythm" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0031648 "protein destabilization" evidence=IEA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

UNIPROTKB|F1P5E8 FBXW11 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1298 (462.0 bits), Expect = 8.8e-158, Sum P(2) = 8.8e-158
 Identities = 240/271 (88%), Positives = 259/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI CRSENSKGVYCLQYDD KI+SGLRDN+IK+WD+ SL+C+KVLTG
Sbjct:   192 IESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTG 251

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVI++GSSDSTVRVWDVNTGE++NTLIHH EAVLHLRFSNG+MVTCSK
Sbjct:   252 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK 311

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVW+TS+CEFVRT
Sbjct:   312 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 371

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   372 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 431

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+L AALDPRAP +TLCLRTLV
Sbjct:   432 GAYDGKIKVWDLQAALDPRAPASTLCLRTLV 462

GO:0046983 "protein dimerization activity" evidence=IEA

MGI|MGI:1338871 Btrc "beta-transducin repeat containing protein" [Mus musculus (taxid:10090)]

 Score = 1302 (463.4 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
 Identities = 241/271 (88%), Positives = 258/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+L+AALDPRAP  TLCLRTLV
Sbjct:   522 GAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552

GO:0000209 "protein polyubiquitination" evidence=IDA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=ISO

GO:0008013 "beta-catenin binding" evidence=IDA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=ISO

GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO

GO:0030163 "protein catabolic process" evidence=IMP

GO:0031648 "protein destabilization" evidence=ISO

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IMP

GO:0042753 "positive regulation of circadian rhythm" evidence=IMP

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP

GO:0045309 "protein phosphorylated amino acid binding" evidence=IDA

GO:0045862 "positive regulation of proteolysis" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IMP

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IMP

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IDA

GO:0071407 "cellular response to organic cyclic compound" evidence=IDA

UNIPROTKB|F1LMH8 Btrc "Protein Btrc" [Rattus norvegicus (taxid:10116)]

 Score = 1302 (463.4 bits), Expect = 2.3e-157, Sum P(2) = 2.3e-157
 Identities = 241/271 (88%), Positives = 258/271 (95%)

Query:   213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
             IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct:   282 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG 341

Query:   273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
             HTGSVLCLQYDERVII+GSSDSTVRVWDVN GEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct:   342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 401

Query:   333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
             DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct:   402 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 461

Query:   393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
             LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct:   462 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 521

Query:   453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
             GAYDGKIKVW+L+AALDPRAP  TLCLRTLV
Sbjct:   522 GAYDGKIKVWDLMAALDPRAPAGTLCLRTLV 552

GO:0000209 "protein polyubiquitination" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0006470 "protein dephosphorylation" evidence=IEA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA

GO:0031648 "protein destabilization" evidence=IEA

GO:0033598 "mammary gland epithelial cell proliferation" evidence=IEA

GO:0042753 "positive regulation of circadian rhythm" evidence=IEA

GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA

GO:0045309 "protein phosphorylated amino acid binding" evidence=IEA

GO:0045862 "positive regulation of proteolysis" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0060444 "branching involved in mammary gland duct morphogenesis" evidence=IEA

GO:0061136 "regulation of proteasomal protein catabolic process" evidence=IEA

GO:0071407 "cellular response to organic cyclic compound" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5SRY7	FBW1B_MOUSE	No assigned EC number	0.6600	0.8497	0.7619	yes	N/A
Q09990	LIN23_CAEEL	No assigned EC number	0.5520	0.8991	0.6571	yes	N/A
Q91854	TRCB_XENLA	No assigned EC number	0.6234	0.9218	0.8648	N/A	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	486
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-68
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-65
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-53
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-35
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-35
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-35
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-28
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-25
pfam12125	40	pfam12125, Beta-TrCP_D, D domain of beta-TrCP	4e-23
smart01028	40	smart01028, Beta-TrCP_D, D domain of beta-TrCP	1e-22
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-09
smart00320	40	smart00320, WD40, WD40 repeats	7e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	1e-07
smart00320	40	smart00320, WD40, WD40 repeats	3e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	7e-06
smart00320	40	smart00320, WD40, WD40 repeats	2e-05
smart00320	40	smart00320, WD40, WD40 repeats	2e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-05
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	1e-04
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	2e-04
smart00320	40	smart00320, WD40, WD40 repeats	3e-04
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	3e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  220 bits (562), Expect = 2e-68
 Identities = 90/243 (37%), Positives = 133/243 (54%), Gaps = 15/243 (6%)

Query: 234 SKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS 289
           + GV C+ +      + +G  D TIKVWD  + + ++ L GHTG V  +    D   + S
Sbjct: 9   TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLAS 68

Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEI 347
           GSSD T+R+WD+ TGE V TL  H   V  + FS    ++ + S+D++I VWD+ +   +
Sbjct: 69  GSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL 128

Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
           T    L GH   VN V F  D  ++ S+S D TIK+W+  + + V TL GH   +  + +
Sbjct: 129 T---TLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAF 185

Query: 406 RD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKV 461
                 ++S SSD TI+LWD+  G CL  L GHE  V  + F      + SG+ DG I+V
Sbjct: 186 SPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRV 245

Query: 462 WNL 464
           W+L
Sbjct: 246 WDL 248

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  212 bits (541), Expect = 3e-65
 Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 61/337 (18%)

Query: 139 VRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET 196
            RTL GH  G+ C+ +    +L+ +GS D TI+                 +WD L   E 
Sbjct: 2   RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIK-----------------VWD-LETGEL 43

Query: 197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256
                G  GP                 ++ +   +           D   + SG  D TI
Sbjct: 44  LRTLKGHTGP-----------------VRDVAASA-----------DGTYLASGSSDKTI 75

Query: 257 KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC 314
           ++WD  + +C++ LTGHT  V  + +  D R++ S S D T++VWDV TG+ + TL  H 
Sbjct: 76  RLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT 135

Query: 315 EAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI 370
           + V  + FS     + + S+D +I +WD+ +         L GH   VN V F  D + +
Sbjct: 136 DWVNSVAFSPDGTFVASSSQDGTIKLWDLRT---GKCVATLTGHTGEVNSVAFSPDGEKL 192

Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA 428
           +S+S D TIK+W+ S+ + + TL GH+ G+  + +     L+ SGS D TIR+WD+  G 
Sbjct: 193 LSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE 252

Query: 429 CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
           C++ L GH   V  + +  D KR+ SG+ DG I++W+
Sbjct: 253 CVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  179 bits (457), Expect = 6e-53
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 13/209 (6%)

Query: 266 CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
             + L GHTG V C+ +  D +++ +GS D T++VWD+ TGE++ TL  H   V  +  S
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 324 --NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTI 379
                + + S D++I +WD+ +   +   R L GH + V+ V F  D + + S+S D+TI
Sbjct: 61  ADGTYLASGSSDKTIRLWDLETGECV---RTLTGHTSYVSSVAFSPDGRILSSSSRDKTI 117

Query: 380 KVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
           KVW+  + + + TL GH   +  + +      V S S D TI+LWD+  G C+  L GH 
Sbjct: 118 KVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT 177

Query: 438 ELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
             V  + F  D ++++S + DG IK+W+L
Sbjct: 178 GEVNSVAFSPDGEKLLSSSSDGTIKLWDL 206

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  137 bits (344), Expect = 2e-35
 Identities = 96/339 (28%), Positives = 154/339 (45%), Gaps = 27/339 (7%)

Query: 105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR---DRLVV 160
                  P+ +   + S+S D T+K+W+ S+  + +RTL GH   +  L +      L  
Sbjct: 113 SKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLAS 172

Query: 161 SGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN 216
             S D TI+  D    +     + H D +    F       I  G   G      +I   
Sbjct: 173 GSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDG------TIRL- 225

Query: 217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD-RVSLQCIKVLTGHTG 275
           W +    L R      +   V     D   + SG  D TI++WD R S   ++ L+GH+ 
Sbjct: 226 WDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSS 285

Query: 276 SVLCLQY--DERVIISGSSDSTVRVWDVNTGE--MVNTLIHHCEAVLHLRFS---NGMMV 328
           SVL + +  D +++ SGSSD TVR+WD+ TG+     TL  H   V  L FS   + ++ 
Sbjct: 286 SVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVS 345

Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCE 388
             S D +I +WD+ +   +          +       D + + S S D T+++W+ S+  
Sbjct: 346 GGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVS--FSPDGRVVSSGSTDGTVRLWDLSTGS 403

Query: 389 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE 425
            +R L+GH   +  L +    + + SGSSDNTIRLWD++
Sbjct: 404 LLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  136 bits (343), Expect = 3e-35
 Identities = 101/414 (24%), Positives = 179/414 (43%), Gaps = 56/414 (13%)

Query: 66  KYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGD 125
                     +   +   L          +++ L    +    S+  + D + ++S S D
Sbjct: 27  SLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSD 86

Query: 126 RTIKVWN-TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT 184
            TIK+W+  +  + +++L G              + S   ++ +       + SSS D T
Sbjct: 87  GTIKLWDLDNGEKLIKSLEGLHDS----SVSKLALSSPDGNSIL-------LASSSLDGT 135

Query: 185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD 244
           + +WD     +                           L++ +   SE+   +       
Sbjct: 136 VKLWDLSTPGK---------------------------LIRTLEGHSESVTSLAFSPDGK 168

Query: 245 HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDV 301
                   D TIK+WD  + + +  L GHT  V  L +      +I SGSSD T+R+WD+
Sbjct: 169 LLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL 228

Query: 302 NTGEMVNTLI--HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
           +TG+++ + +  H    V        ++ + S D +I +WD+ S + +   R L GH ++
Sbjct: 229 STGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLL--RTLSGHSSS 286

Query: 360 VNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV--RTLNGHKRGIACLQYR---DRLVVS 412
           V  V F  D K + S S D T+++W+  + + +   TL GH+  ++ L +      LV  
Sbjct: 287 VLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSG 346

Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
           GS D TIRLWD+  G  L+ LEGH   V  + F  D + + SG+ DG +++W+L
Sbjct: 347 GSDDGTIRLWDLRTGKPLKTLEGHSN-VLSVSFSPDGRVVSSGSTDGTVRLWDL 399

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  131 bits (332), Expect = 6e-35
 Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 52/232 (22%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
           D + + S+S D+TIKVW+  + + + TL GH   +  + +        S D T       
Sbjct: 104 DGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAF--------SPDGTF------ 149

Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
            + SSS D TI +WD                            +    L       + ++
Sbjct: 150 -VASSSQDGTIKLWDL------------------------RTGKCVATL-------TGHT 177

Query: 235 KGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG 290
             V  + +  D  K++S   D TIK+WD  + +C+  L GH   V  + +  D  ++ SG
Sbjct: 178 GEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG 237

Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWD 340
           S D T+RVWD+ TGE V TL  H  +V  L +S     + + S D +I +WD
Sbjct: 238 SEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  113 bits (286), Expect = 2e-28
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 50/196 (25%)

Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 168
           S+  + D  ++ S+S D TIK+W+  + + V TL GH   +  + +              
Sbjct: 140 SVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSP------------ 187

Query: 169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRIN 228
              D  +++SSS D TI +WD                              GK L     
Sbjct: 188 ---DGEKLLSSSSDGTIKLWDL---------------------------STGKCLGT--- 214

Query: 229 CRSENSKGVYCLQYDDHK--IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE 284
            R     GV  + +      + SG  D TI+VWD  + +C++ L+GHT SV  L +  D 
Sbjct: 215 LRGHE-NGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDG 273

Query: 285 RVIISGSSDSTVRVWD 300
           + + SGS+D T+R+WD
Sbjct: 274 KRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  107 bits (267), Expect = 4e-25
 Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 34/300 (11%)

Query: 115 DEKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRY 170
           D K + S S  D TIK+W+  + + + TL GH   ++ L +      L+ SGSSD TIR 
Sbjct: 166 DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRL 225

Query: 171 RD-----EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQ 225
            D       +   S H D++ +  F         G   G       +I   W + +    
Sbjct: 226 WDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDG-------TIRL-WDL-RSSSS 275

Query: 226 RINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQ 281
            +   S +S  V  + +  D   + SG  D T+++WD  + + +  LT  GH G V  L 
Sbjct: 276 LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLS 335

Query: 282 Y---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI 336
           +      ++  GS D T+R+WD+ TG+ + TL  H   VL + FS    ++ + S D ++
Sbjct: 336 FSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFSPDGRVVSSGSTDGTV 394

Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN 394
            +WD    +  +L R L GH + V  +DF  D K + S S D TI++W+  +     + +
Sbjct: 395 RLWD---LSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFS 451

Length = 466

>gnl|CDD|152560 pfam12125, Beta-TrCP_D, D domain of beta-TrCP

 Score = 91.4 bits (227), Expect = 4e-23
 Identities = 32/40 (80%), Positives = 35/40 (87%)

Query: 65  FKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQ 104
            KYF KWSE DQ+DFVE+LLSRMCHYQHG IN +LKPMLQ
Sbjct: 1   VKYFTKWSESDQVDFVEHLLSRMCHYQHGQINAFLKPMLQ 40

This domain is found in eukaryotes, and is approximately 40 amino acids in length. It is found associated with pfam00646, pfam00400. The protein that contains this domain functions as a ubiquitin ligase. Ubiquitination is required to direct proteins towards the proteasome for degradation. This protein is part of the WD40 class of F box proteins. The D domain of these F box proteins is involved in mediating the dimerisation of the protein. Dimerisation is necessary to polyubiquitinate substrates so this D domain is vital in directing substrates towards the proteasome for degradation. Length = 40

>gnl|CDD|198096 smart01028, Beta-TrCP_D, D domain of beta-TrCP

 Score = 89.9 bits (223), Expect = 1e-22
 Identities = 33/40 (82%), Positives = 38/40 (95%)

Query: 65  FKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQ 104
            KYF+KWSE DQ+DFVE+L+SRMCHYQHGHIN+YLKPMLQ
Sbjct: 1   VKYFEKWSESDQVDFVEHLISRMCHYQHGHINSYLKPMLQ 40

This domain is found in eukaryotes, and is approximately 40 amino acids in length. It is found associated with F-box domain, WD domain. The protein that contains this domain functions as a ubiquitin ligase. Ubiquitination is required to direct proteins towards the proteasome for degradation. This protein is part of the WD40 class of F box proteins. The D domain of these F box proteins is involved in mediating the dimerisation of the protein. Dimerisation is necessary to polyubiquitinate substrates so this D domain is vital in directing substrates towards the proteasome for degradation. Length = 40

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 56.2 bits (136), Expect = 8e-09
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSS 164
             S+  + D   + S S D TI+VW+  + E V+TL+GH   +  L +    + + SGS+
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA 281

Query: 165 DNTIR 169
           D TIR
Sbjct: 282 DGTIR 286

Length = 289

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 48.1 bits (115), Expect = 7e-08
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 2/40 (5%)

Query: 263 SLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
           S + +K L GHTG V  + +  D + + SGS D T+++WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
           + ++ L GHTG V  + +  D  ++ SGS D TVRVWD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
           G  L+ L+GH   V  + F  D K + SG+ DG IK+W+
Sbjct: 2   GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
           G  LR L+GH   V  + F  D   + SG+ DG ++VW+
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
            L R L GH   V  V F  D   + S S D T++VW+
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 386 SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
           S E ++TL GH   +  + +    + + SGS D TI+LWD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
            L + L GH   V  V F  D KY+ S S D TIK+W+
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 387 CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
            + +RTL GH   +  + +     L+ SGS D T+R+WD
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 44.7 bits (105), Expect = 1e-04
 Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 13/162 (8%)

Query: 276 SVLCLQ-YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCS 331
           S +C   Y +  + S + +  V+VWDV   ++V  +  H + V  + +S+    ++ + S
Sbjct: 536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGS 595

Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE---KYIVSASGDRTIKVWNTSSCE 388
            D S+ +W +     I      +  +A +  V F     + +   S D  +  ++  + +
Sbjct: 596 DDGSVKLWSINQGVSIGT----IKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPK 651

Query: 389 F-VRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIECGA 428
             + T+ GH + ++ +++ D   +VS S+DNT++LWD+    
Sbjct: 652 LPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSI 693

Length = 793

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 12/111 (10%)

Query: 242 YDDHKIVSGLRDNTIKVWD-------RVSLQCIKVLTGHTGSVLCLQYD---ERVIISGS 291
           +D  K+ +   D TI  W        +     I  L GHT  V  + +      V+ S  
Sbjct: 86  FDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAG 145

Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWD 340
           +D  V VWDV  G+ V  +  H + +  L ++    ++ T SKD+ + + D
Sbjct: 146 ADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIID 196

Length = 493

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 303 TGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWD 340
           +GE++ TL  H   V  + FS     + + S D +I +WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 43.2 bits (101), Expect = 3e-04
 Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 12/140 (8%)

Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEF 389
           +  + VWD+     +T  +    H   V  +D+   D   + S S D ++K+W+ +    
Sbjct: 554 EGVVQVWDVARSQLVTEMK---EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVS 610

Query: 390 VRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF 445
           + T+   K  I C+Q+     R +  GS+D+ +  +D+      L  + GH + V  +RF
Sbjct: 611 IGTIKT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF 669

Query: 446 -DAKRIVSGAYDGKIKVWNL 464
            D+  +VS + D  +K+W+L
Sbjct: 670 VDSSTLVSSSTDNTLKLWDL 689

Length = 793

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 304 GEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWD 340
           G+++ TL  H   V  + FS    ++ + S D ++ VWD
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 26/122 (21%), Positives = 61/122 (50%), Gaps = 10/122 (8%)

Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIEC 426
           + S++ +  ++VW+ +  + V  +  H++ +  + Y      L+ SGS D +++LW I  
Sbjct: 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 607

Query: 427 GACLRVLEGHEELVRCIRFDA---KRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           G  +  ++    +  C++F +   + +  G+ D K+  ++L    +P+ P  T+   +  
Sbjct: 608 GVSIGTIKTKANIC-CVQFPSESGRSLAFGSADHKVYYYDL---RNPKLPLCTMIGHSKT 663

Query: 484 VS 485
           VS
Sbjct: 664 VS 665

Length = 793

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	486
KOG0281|consensus	499		100.0
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0319|consensus	775		100.0
KOG0281|consensus	499		100.0
KOG0286|consensus	343		100.0
KOG0296|consensus	399		100.0
KOG0295|consensus	406		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0318|consensus	603		100.0
KOG0272|consensus	459		100.0
KOG0279|consensus	315		100.0
KOG0291|consensus	893		100.0
KOG0319|consensus	775		100.0
KOG0273|consensus	524		100.0
KOG0285|consensus	460		100.0
KOG0274|consensus	537		100.0
KOG0273|consensus	524		100.0
KOG0316|consensus	307		100.0
KOG0265|consensus	338		100.0
KOG0263|consensus	707		100.0
KOG0266|consensus	456		100.0
KOG0284|consensus	464		100.0
KOG0306|consensus	888		100.0
KOG0313|consensus	423		100.0
KOG0291|consensus	893		100.0
KOG0645|consensus	312		100.0
KOG0318|consensus	603		100.0
KOG0293|consensus	519		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0274|consensus	537		100.0
KOG0263|consensus	707		100.0
KOG0282|consensus	503		100.0
KOG0279|consensus	315		100.0
KOG0306|consensus	888		100.0
KOG0276|consensus	794		100.0
KOG0315|consensus	311		100.0
KOG0295|consensus	406		100.0
KOG0316|consensus	307		100.0
KOG0282|consensus	503		100.0
KOG0285|consensus	460		100.0
KOG0296|consensus	399		99.98
KOG0645|consensus	312		99.97
KOG0276|consensus	794		99.97
KOG1408|consensus	1080		99.97
KOG0284|consensus	464		99.97
KOG0275|consensus	508		99.97
KOG0292|consensus	1202		99.97
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
KOG0313|consensus	423		99.97
KOG0278|consensus	334		99.97
KOG0277|consensus	311		99.97
KOG1408|consensus	1080		99.97
KOG1446|consensus	311		99.97
KOG0265|consensus	338		99.97
KOG0288|consensus	459		99.96
KOG0300|consensus	481		99.96
KOG0266|consensus	456		99.96
KOG0301|consensus	745		99.96
KOG0294|consensus	362		99.96
KOG0643|consensus	327		99.96
KOG0305|consensus	484		99.96
KOG0292|consensus	1202		99.96
KOG1407|consensus	313		99.96
KOG0310|consensus	487		99.96
KOG0278|consensus	334		99.96
KOG0283|consensus	712		99.96
KOG0289|consensus	506		99.96
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.96
KOG0299|consensus	479		99.95
KOG1036|consensus	323		99.95
KOG0268|consensus	433		99.95
KOG0647|consensus	347		99.95
KOG1539|consensus	910		99.95
KOG0277|consensus	311		99.95
KOG1407|consensus	313		99.95
KOG0308|consensus	735		99.95
PTZ00421	493	coronin; Provisional	99.94
KOG0640|consensus	430		99.94
PTZ00420	568	coronin; Provisional	99.94
KOG0772|consensus	641		99.94
KOG0283|consensus	712		99.94
KOG0268|consensus	433		99.94
KOG0301|consensus	745		99.94
KOG0294|consensus	362		99.94
KOG0264|consensus	422		99.94
PTZ00421	493	coronin; Provisional	99.94
KOG0293|consensus	519		99.94
KOG0299|consensus	479		99.94
KOG0308|consensus	735		99.94
KOG0646|consensus	476		99.94
KOG0310|consensus	487		99.93
KOG0973|consensus	942		99.93
KOG0641|consensus	350		99.93
PTZ00420	568	coronin; Provisional	99.93
KOG0275|consensus	508		99.93
KOG0305|consensus	484		99.93
KOG4283|consensus	397		99.93
KOG2106|consensus	626		99.93
KOG0646|consensus	476		99.93
KOG1332|consensus	299		99.93
KOG1446|consensus	311		99.93
KOG0640|consensus	430		99.93
KOG1539|consensus	910		99.92
KOG0289|consensus	506		99.92
KOG1332|consensus	299		99.92
KOG2106|consensus	626		99.92
KOG0647|consensus	347		99.92
KOG0639|consensus	705		99.91
KOG0269|consensus	839		99.91
KOG4283|consensus	397		99.91
KOG0288|consensus	459		99.91
KOG2048|consensus	691		99.91
KOG1036|consensus	323		99.91
KOG0772|consensus	641		99.91
KOG2445|consensus	361		99.91
KOG0641|consensus	350		99.91
KOG0639|consensus	705		99.91
KOG2096|consensus	420		99.91
KOG0264|consensus	422		99.9
KOG2445|consensus	361		99.9
KOG0321|consensus	720		99.9
KOG0300|consensus	481		99.9
KOG0270|consensus	463		99.89
KOG2048|consensus	691		99.89
KOG1063|consensus	764		99.89
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG4378|consensus	673		99.89
KOG2055|consensus	514		99.89
KOG1274|consensus	933		99.89
KOG0302|consensus	440		99.88
KOG0269|consensus	839		99.88
KOG0643|consensus	327		99.88
KOG2055|consensus	514		99.88
KOG0267|consensus	825		99.88
KOG2096|consensus	420		99.88
KOG0650|consensus	733		99.87
KOG1274|consensus	933		99.87
KOG0649|consensus	325		99.87
KOG0270|consensus	463		99.87
KOG0973|consensus	942		99.86
KOG0302|consensus	440		99.86
KOG1273|consensus	405		99.86
KOG1517|consensus	1387		99.86
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.86
KOG1445|consensus	1012		99.85
KOG0321|consensus	720		99.85
KOG1034|consensus	385		99.84
KOG0267|consensus	825		99.84
KOG1188|consensus	376		99.84
KOG0307|consensus	1049		99.84
KOG4328|consensus	498		99.83
KOG0307|consensus	1049		99.83
KOG4328|consensus	498		99.82
KOG1063|consensus	764		99.82
KOG4378|consensus	673		99.81
KOG1273|consensus	405		99.81
KOG0649|consensus	325		99.8
KOG2919|consensus	406		99.8
KOG1963|consensus	792		99.79
KOG0322|consensus	323		99.79
KOG0322|consensus	323		99.79
COG2319	466	FOG: WD40 repeat [General function prediction only	99.79
KOG2110|consensus	391		99.77
KOG1034|consensus	385		99.77
COG2319	466	FOG: WD40 repeat [General function prediction only	99.77
KOG1538|consensus	1081		99.77
KOG2919|consensus	406		99.76
KOG1517|consensus	1387		99.75
KOG0642|consensus	577		99.75
KOG0644|consensus	1113		99.74
KOG1240|consensus	1431		99.74
KOG1587|consensus	555		99.74
KOG1009|consensus	434		99.73
KOG0642|consensus	577		99.73
KOG4227|consensus	609		99.72
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.72
KOG0303|consensus	472		99.71
KOG1007|consensus	370		99.71
KOG1334|consensus	559		99.7
KOG1007|consensus	370		99.7
KOG0290|consensus	364		99.69
KOG0290|consensus	364		99.69
KOG0303|consensus	472		99.68
KOG1188|consensus	376		99.68
KOG0650|consensus	733		99.68
KOG1334|consensus	559		99.67
KOG0644|consensus	1113		99.66
KOG2111|consensus	346		99.65
KOG2110|consensus	391		99.65
KOG1587|consensus	555		99.64
KOG1538|consensus	1081		99.64
KOG1963|consensus	792		99.62
KOG4227|consensus	609		99.61
KOG1272|consensus	545		99.6
KOG1310|consensus	758		99.6
KOG1524|consensus	737		99.6
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.58
KOG1445|consensus	1012		99.58
KOG1240|consensus	1431		99.57
PRK11028	330	6-phosphogluconolactonase; Provisional	99.57
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.53
PRK11028	330	6-phosphogluconolactonase; Provisional	99.53
KOG2394|consensus	636		99.53
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.52
KOG1272|consensus	545		99.51
KOG1523|consensus	361		99.51
KOG0771|consensus	398		99.5
KOG3881|consensus	412		99.5
KOG2111|consensus	346		99.49
KOG2321|consensus	703		99.48
KOG0771|consensus	398		99.48
KOG1524|consensus	737		99.46
KOG1523|consensus	361		99.46
KOG2321|consensus	703		99.45
KOG3881|consensus	412		99.45
KOG1409|consensus	404		99.43
KOG1310|consensus	758		99.43
KOG2394|consensus	636		99.42
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.41
PRK01742	429	tolB translocation protein TolB; Provisional	99.39
KOG0974|consensus	967		99.37
KOG4497|consensus	447		99.34
KOG1009|consensus	434		99.34
PRK01742	429	tolB translocation protein TolB; Provisional	99.3
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.3
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.29
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.28
KOG1912|consensus	1062		99.28
KOG1064|consensus	2439		99.27
KOG4547|consensus	541		99.25
KOG4497|consensus	447		99.24
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.2
KOG4547|consensus	541		99.19
KOG0280|consensus	339		99.19
KOG1354|consensus	433		99.15
KOG2139|consensus	445		99.14
KOG0974|consensus	967		99.13
KOG0280|consensus	339		99.13
KOG4190|consensus	1034		99.1
KOG4190|consensus	1034		99.1
KOG1409|consensus	404		99.1
PRK03629	429	tolB translocation protein TolB; Provisional	99.09
PRK02889	427	tolB translocation protein TolB; Provisional	99.08
KOG2041|consensus	1189		99.07
KOG1064|consensus	2439		99.07
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.06
PRK05137	435	tolB translocation protein TolB; Provisional	99.06
KOG2315|consensus	566		99.05
PRK04922	433	tolB translocation protein TolB; Provisional	99.05
PRK03629	429	tolB translocation protein TolB; Provisional	99.03
KOG1912|consensus	1062		99.02
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.0
KOG2139|consensus	445		99.0
PRK04922	433	tolB translocation protein TolB; Provisional	99.0
KOG1354|consensus	433		98.99
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.98
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.97
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.96
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.95
PRK05137	435	tolB translocation protein TolB; Provisional	98.93
KOG0309|consensus	1081		98.93
PRK02889	427	tolB translocation protein TolB; Provisional	98.92
KOG2041|consensus	1189		98.9
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.9
KOG2315|consensus	566		98.89
KOG4532|consensus	344		98.88
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.87
KOG2695|consensus	425		98.87
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.85
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.85
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.82
KOG3914|consensus	390		98.81
KOG1275|consensus	1118		98.81
KOG3914|consensus	390		98.8
KOG4714|consensus	319		98.79
KOG4649|consensus	354		98.79
KOG2314|consensus	698		98.77
KOG2314|consensus	698		98.76
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.75
KOG1275|consensus	1118		98.74
KOG2066|consensus	846		98.72
KOG2695|consensus	425		98.72
KOG0309|consensus	1081		98.71
PRK00178	430	tolB translocation protein TolB; Provisional	98.7
PRK00178	430	tolB translocation protein TolB; Provisional	98.65
PRK04792	448	tolB translocation protein TolB; Provisional	98.65
KOG4714|consensus	319		98.63
KOG2066|consensus	846		98.61
COG4946	668	Uncharacterized protein related to the periplasmic	98.59
PRK04792	448	tolB translocation protein TolB; Provisional	98.59
KOG4532|consensus	344		98.57
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.56
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.54
KOG1645|consensus	463		98.54
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.53
KOG0882|consensus	558		98.48
COG4946	668	Uncharacterized protein related to the periplasmic	98.48
KOG2114|consensus	933		98.43
KOG3621|consensus	726		98.42
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.4
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.33
PRK01029	428	tolB translocation protein TolB; Provisional	98.32
PRK01029	428	tolB translocation protein TolB; Provisional	98.31
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.3
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.29
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.28
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.28
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.25
PF12125	40	Beta-TrCP_D: D domain of beta-TrCP; InterPro: IPR0	98.19
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.17
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.16
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.16
KOG4649|consensus	354		98.15
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.14
KOG0882|consensus	558		98.12
KOG2114|consensus	933		98.12
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.11
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.1
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.04
KOG1645|consensus	463		98.04
PHA02713	557	hypothetical protein; Provisional	98.01
PRK04043	419	tolB translocation protein TolB; Provisional	97.96
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.95
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	97.92
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.9
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.9
KOG1897|consensus	1096		97.89
KOG3621|consensus	726		97.89
KOG1832|consensus	1516		97.88
KOG4441|consensus	571		97.88
PHA02713	557	hypothetical protein; Provisional	97.87
PRK04043	419	tolB translocation protein TolB; Provisional	97.86
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.78
KOG1920|consensus	1265		97.7
KOG1920|consensus	1265		97.7
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.67
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.64
KOG1832|consensus	1516		97.61
KOG2444|consensus	238		97.59
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.58
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.56
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.5
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.45
KOG4441|consensus	571		97.45
KOG1008|consensus	783		97.4
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.39
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.37
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.36
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.29
KOG2444|consensus	238		97.28
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.24
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.16
PRK02888	635	nitrous-oxide reductase; Validated	97.05
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.04
COG1520	370	FOG: WD40-like repeat [Function unknown]	97.03
PRK02888	635	nitrous-oxide reductase; Validated	96.94
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.88
PHA03098	534	kelch-like protein; Provisional	96.85
PHA03098	534	kelch-like protein; Provisional	96.82
KOG2395|consensus	644		96.81
KOG2079|consensus	1206		96.79
KOG2079|consensus	1206		96.79
PHA02790	480	Kelch-like protein; Provisional	96.74
KOG4640|consensus	665		96.7
PHA02790	480	Kelch-like protein; Provisional	96.68
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	96.67
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.65
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.59
KOG1008|consensus	783		96.58
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	96.53
KOG3617|consensus	1416		96.48
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.45
COG5276	370	Uncharacterized conserved protein [Function unknow	96.45
COG5276	370	Uncharacterized conserved protein [Function unknow	96.37
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	96.12
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.11
KOG2395|consensus	644		95.94
KOG3617|consensus	1416		95.93
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.83
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	95.81
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	95.74
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	95.44
KOG4640|consensus	665		95.36
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.34
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	95.17
PLN02153	341	epithiospecifier protein	95.12
PLN02193	470	nitrile-specifier protein	95.02
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	94.99
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	94.94
KOG4499|consensus	310		94.88
PLN02153	341	epithiospecifier protein	94.75
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	94.69
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	94.65
PLN02193	470	nitrile-specifier protein	94.55
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.47
KOG1897|consensus	1096		94.41
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	94.1
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	93.97
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	93.67
COG3391	381	Uncharacterized conserved protein [Function unknow	93.67
KOG4499|consensus	310		93.36
KOG1898|consensus	1205		92.86
KOG2280|consensus	829		92.79
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	92.38
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	92.21
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	92.15
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	92.12
COG5167	776	VID27 Protein involved in vacuole import and degra	91.93
COG5167	776	VID27 Protein involved in vacuole import and degra	91.85
PRK13616	591	lipoprotein LpqB; Provisional	91.65
PRK13616	591	lipoprotein LpqB; Provisional	91.14
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	91.12
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	91.01
COG1520	370	FOG: WD40-like repeat [Function unknown]	90.53
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	90.17
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	90.12
KOG2280|consensus	829		89.85
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	89.7
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	89.6
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	89.6
KOG1916|consensus	1283		89.42
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	88.58
KOG1983|consensus	993		88.56
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	88.39
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	88.18
KOG2063|consensus	877		87.66
KOG1898|consensus	1205		87.14
KOG1900|consensus	1311		87.14
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	86.85
KOG1900|consensus	1311		86.6
PF14727	418	PHTB1_N: PTHB1 N-terminus	86.26
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	86.14
COG3391	381	Uncharacterized conserved protein [Function unknow	85.63
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	85.04
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	84.73
KOG2063|consensus	877		83.73
PRK10115	686	protease 2; Provisional	83.49
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	83.33
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	83.11
KOG3616|consensus	1636		83.02
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	82.48
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	82.47
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	82.36
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	82.0
KOG3522|consensus	925		81.83
KOG1916|consensus	1283		80.75

>KOG0281|consensus

Probab=100.00  E-value=3.1e-58  Score=387.78  Aligned_cols=416  Identities=72%  Similarity=1.154  Sum_probs=336.1

Q ss_pred             eeecCCCCCCCccchhhhhHHHHHhccCChhhHHHHHHHHHHhhccCCchhhhhhhcccccccccccCCccCcceE----
Q psy9182          44 LYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYI----  119 (486)
Q Consensus        44 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l----  119 (486)
                      ++.+......+..+..+.+.++++++.|.+..|.+++++++.++|++++++++.+++|+++++|+..+|-..-..+    
T Consensus        11 ~~~~v~d~~~S~sy~~~~e~~~~~~~~wsE~~qvdfv~~ll~~m~hyq~g~v~n~~rpmLqrDFi~~lP~~gl~hi~e~i   90 (499)
T KOG0281|consen   11 SVIVVRDRPSSCSYQKEKELCIKYFPQWSESDQVDFVEHLISRMCHYQHGHINNYLKPMLQRDFITALPEQGLDHIAENI   90 (499)
T ss_pred             eeeeccCCCCCcchhcccccceeeccccccccchhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHhcccccHHHHHHHH
Confidence            4444444334566677788889999999999999999999999999999999999999999999999884321111    


Q ss_pred             EEe-------ecCceeeeccc--ccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeec
Q psy9182         120 VSA-------SGDRTIKVWNT--SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF  190 (486)
Q Consensus       120 ~tg-------~~dg~v~iWd~--~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~  190 (486)
                      ++-       ...-..+-|.-  ..|..-+.+-.  ..+.....                |.+        -..-+-|+.
T Consensus        91 lsyld~~sLc~celv~k~W~r~l~dg~~WKkLie--~~vr~dsl----------------Wrg--------l~e~rqw~~  144 (499)
T KOG0281|consen   91 LSYLDALSLCACELVCKEWKRVLSDGMLWKKLIE--RMVRTDSL----------------WRG--------LSERRQWDQ  144 (499)
T ss_pred             HHhcchhhhhHHHHHHHHHHHHhccchHHHHHHH--HhcchHHH----------------Hhh--------hhhccCcch
Confidence            110       00001111110  00000000000  00000000                000        000111221


Q ss_pred             ccccccccCC-CCCCC--------CCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         191 LNYSETPIQG-GGGGG--------PPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       191 ~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      ......+... .....        .......+..+|+.+...++++++.......++|+.+|...+++|..|++|+|||.
T Consensus       145 ~lf~~r~~~~~~~~n~f~~~l~pki~~di~~idsNWr~Gr~~~~rinc~Se~skgVYClQYDD~kiVSGlrDnTikiWD~  224 (499)
T KOG0281|consen  145 YLFKNRPNDGGFPPNSFYRLLYPKIIQDIETIESNWRCGRHLLQRINCRSENSKGVYCLQYDDEKIVSGLRDNTIKIWDK  224 (499)
T ss_pred             hhccCCCCcCCcCCCcchhhhhHHHHHHHhhhhcchhccceeeeeecCCcccCCceEEEEecchhhhcccccCceEEecc
Confidence            1110000000 00000        01134567799999999999999999999999999999999999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEEC
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~  341 (486)
                      .+..+.+.+.||.+.|.|+.++.+.+++|+.|.+|++||.++++++.++..|...|..+.|+++++++++.|..+.+||+
T Consensus       225 n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm  304 (499)
T KOG0281|consen  225 NSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDM  304 (499)
T ss_pred             ccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEE
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL  421 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~i  421 (486)
                      ..+..+...+.+.+|...|+.+.|+.+++++++.|.+|++|++.+++.++++.+|..+|.|+.+.++++++|+.|.+|++
T Consensus       305 ~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRl  384 (499)
T KOG0281|consen  305 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRL  384 (499)
T ss_pred             cCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccceehhccCeEEEecCCCceEEE
Confidence            99988888889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCCCCCCCCccccceeeeeec
Q psy9182         422 WDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVS  485 (486)
Q Consensus       422 wd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~~~~~~~~~~~~~~~~~~  485 (486)
                      ||+..|.+++.++||+.-|.++.||.+.+++|+.||+|++||+.++.+|++++...|+.+++.|
T Consensus       385 wdi~~G~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~h  448 (499)
T KOG0281|consen  385 WDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH  448 (499)
T ss_pred             EeccccHHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccCCcccccchHHHhhhhc
Confidence            9999999999999999999999999999999999999999999999999999999999988764

>KOG0271|consensus

Probab=100.00  E-value=1.2e-51  Score=352.15  Aligned_cols=316  Identities=29%  Similarity=0.556  Sum_probs=285.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      +.|...|+|+.|+|+|.+|++|+.|.++|+||+.|..++.+.++|...|.|++|+               ||++.|++|+
T Consensus       112 ~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvaws---------------PDgk~iASG~  176 (480)
T KOG0271|consen  112 AGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWS---------------PDGKKIASGS  176 (480)
T ss_pred             CCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEEC---------------CCcchhhccc
Confidence            6678899999999999999999999999999999999999999999999999998               7999999999


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe-------CCCEEEEEecC
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-------DDHKIVSGLRD  253 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~~~~~d  253 (486)
                      .||+|++||..++......                              ..+|...|.++++       ..++|++++.|
T Consensus       177 ~dg~I~lwdpktg~~~g~~------------------------------l~gH~K~It~Lawep~hl~p~~r~las~skD  226 (480)
T KOG0271|consen  177 KDGSIRLWDPKTGQQIGRA------------------------------LRGHKKWITALAWEPLHLVPPCRRLASSSKD  226 (480)
T ss_pred             cCCeEEEecCCCCCccccc------------------------------ccCcccceeEEeecccccCCCccceecccCC
Confidence            9999999997665433221                              2356666666665       45689999999


Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc---------
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---------  323 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~---------  323 (486)
                      |.++|||+..++++..+.+|..+|+|+.|. ..++++|+.|++|++|+...|.+.+.+++|...|..++.+         
T Consensus       227 g~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtga  306 (480)
T KOG0271|consen  227 GSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGA  306 (480)
T ss_pred             CCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccc
Confidence            999999999999999999999999999995 6799999999999999999999999999999999988876         


Q ss_pred             ----CC-------------------------eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEE
Q psy9182         324 ----NG-------------------------MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVS  372 (486)
Q Consensus       324 ----~~-------------------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~  372 (486)
                          ++                         .+++|+.|.++.+|+....+.  ....+.+|...|+.+.|  |++++++
T Consensus       307 f~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kk--pi~rmtgHq~lVn~V~fSPd~r~IAS  384 (480)
T KOG0271|consen  307 FDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKK--PITRMTGHQALVNHVSFSPDGRYIAS  384 (480)
T ss_pred             cccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccccc--chhhhhchhhheeeEEECCCccEEEE
Confidence                22                         399999999999999766542  33567799999999988  8999999


Q ss_pred             EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCC
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK  448 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~  448 (486)
                      ++.|..|++||-++|+.+.+|++|-..|..++|+  .++|++|+.|.++++||+++.+....+.+|.+.|.++.|  ||.
T Consensus       385 aSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~  464 (480)
T KOG0271|consen  385 ASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQ  464 (480)
T ss_pred             eecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCc
Confidence            9999999999999999999999999999999995  679999999999999999999999999999999999999  999


Q ss_pred             EEEEEeCCCcEEEEe
Q psy9182         449 RIVSGAYDGKIKVWN  463 (486)
Q Consensus       449 ~l~s~~~dg~v~iwd  463 (486)
                      ++++|+.|..+++|.
T Consensus       465 rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  465 RVASGGKDKVLRLWR  479 (480)
T ss_pred             eeecCCCceEEEeec
Confidence            999999999999995

>KOG0271|consensus

Probab=100.00  E-value=1.8e-44  Score=308.28  Aligned_cols=282  Identities=29%  Similarity=0.524  Sum_probs=247.4

Q ss_pred             ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccc
Q psy9182         138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW  217 (486)
Q Consensus       138 ~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (486)
                      +-..+.||.++|.|++|+               +++..|++|+.|.++|+||+.+......                   
T Consensus       107 CssS~~GH~e~Vl~~~fs---------------p~g~~l~tGsGD~TvR~WD~~TeTp~~t-------------------  152 (480)
T KOG0271|consen  107 CSSSIAGHGEAVLSVQFS---------------PTGSRLVTGSGDTTVRLWDLDTETPLFT-------------------  152 (480)
T ss_pred             eccccCCCCCcEEEEEec---------------CCCceEEecCCCceEEeeccCCCCccee-------------------
Confidence            455788999999999998               6888999999999999999876443221                   


Q ss_pred             ccCceeEEEEeccCCCccceEE--EEeCCCEEEEEecCCeEEEEECCCceee-EEEcCCcccEEEEEe-------cCCEE
Q psy9182         218 RMGKFLLQRINCRSENSKGVYC--LQYDDHKIVSGLRDNTIKVWDRVSLQCI-KVLTGHTGSVLCLQY-------DERVI  287 (486)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~-------~~~~l  287 (486)
                                  .++|..-+.|  ++|||+.||+|+.||+|++||.++++++ ..+.+|...|++++|       ..++|
T Consensus       153 ------------~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~l  220 (480)
T KOG0271|consen  153 ------------CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRL  220 (480)
T ss_pred             ------------ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccce
Confidence                        2245555555  5679999999999999999999998776 678999999999999       34689


Q ss_pred             EEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC
Q psy9182         288 ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD  366 (486)
Q Consensus       288 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~  366 (486)
                      ++++.||.++|||+..+.++..+.+|..+|+|+.|- .+++++|+.|++|++|+...+...   +.+.+|...|+.++.+
T Consensus       221 as~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~---r~lkGHahwvN~lals  297 (480)
T KOG0271|consen  221 ASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLC---RELKGHAHWVNHLALS  297 (480)
T ss_pred             ecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHH---Hhhcccchheeeeecc
Confidence            999999999999999999999999999999999998 569999999999999999887544   6777898888877763


Q ss_pred             -------------CC-------------------------EEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEe--
Q psy9182         367 -------------EK-------------------------YIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQY--  405 (486)
Q Consensus       367 -------------~~-------------------------~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~--  405 (486)
                                   ++                         .+++|+.|.++.+|+... .+++....+|...|+.+.|  
T Consensus       298 Tdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP  377 (480)
T KOG0271|consen  298 TDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP  377 (480)
T ss_pred             chhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC
Confidence                         33                         499999999999999765 4578889999999988887  


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         406 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       406 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +++++|+++-|..|++||.++|+.+..|++|-.+|..++|  |.++|++|+.|.++++||+++..
T Consensus       378 d~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkK  442 (480)
T KOG0271|consen  378 DGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKK  442 (480)
T ss_pred             CccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeee
Confidence            5899999999999999999999999999999999999999  88899999999999999999764

>KOG0272|consensus

Probab=100.00  E-value=1.2e-42  Score=300.93  Aligned_cols=276  Identities=25%  Similarity=0.427  Sum_probs=255.2

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      -.-.+.+..+.|+.|++.||||+.+|.++||+..+...+++|.+|...|.++.|+|..                      
T Consensus       172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~----------------------  229 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVD----------------------  229 (459)
T ss_pred             ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCC----------------------
Confidence            3445788899999999999999999999999999999999999999999999996410                      


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                    ++..+++++.||++++|+
T Consensus       230 --------------------------------------------------------------~~~~lat~s~Dgtvklw~  247 (459)
T KOG0272|consen  230 --------------------------------------------------------------SDLNLATASADGTVKLWK  247 (459)
T ss_pred             --------------------------------------------------------------CccceeeeccCCceeeec
Confidence                                                                          234588899999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI  336 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i  336 (486)
                      +.+..++..+.+|...|..++|  +|++|++++.|.+-++||++++..+....+|...|.+++|.++  ++++|+.|..-
T Consensus       248 ~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~  327 (459)
T KOG0272|consen  248 LSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLG  327 (459)
T ss_pred             cCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchh
Confidence            9988999999999999999999  8999999999999999999999999999999999999999854  89999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVV  411 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~  411 (486)
                      +|||++++..+   ..+.+|...|.+++|  +|..+++|+.|++++|||++..+.+.++.+|...|+.+.+.   |.+|+
T Consensus       328 RvWDlRtgr~i---m~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~  404 (459)
T KOG0272|consen  328 RVWDLRTGRCI---MFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLV  404 (459)
T ss_pred             heeecccCcEE---EEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEE
Confidence            99999999876   567789999999999  78899999999999999999999999999999999988885   78999


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +++.|++++||..+++.+++.+.||.+.|.++..  |+.++++++.|.++++|.
T Consensus       405 TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  405 TASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             EcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            9999999999999999999999999999999998  999999999999999995

>KOG0319|consensus

Probab=100.00  E-value=2.6e-41  Score=311.81  Aligned_cols=392  Identities=25%  Similarity=0.497  Sum_probs=304.4

Q ss_pred             HHhhccCCchhhhhhhcccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecc----ee
Q psy9182          84 LSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR----LV  159 (486)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~----~~  159 (486)
                      +.+....+.+..-+.++..|..++..+.++|.+..+++|+.||.|+|||+..+.+...|+||.+.|..+.|++.    .+
T Consensus        85 llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL  164 (775)
T KOG0319|consen   85 LLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLL  164 (775)
T ss_pred             eEEEEEcccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhhe
Confidence            33455566666777788889999999999999999999999999999999999999999999999999999764    57


Q ss_pred             EecCCCCceeccC--------------------------cceeecCCCCCcceeeecccccccccCCCCC----------
Q psy9182         160 VSGSSDNTIRYRD--------------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGG----------  203 (486)
Q Consensus       160 ~~~~~d~~i~~~~--------------------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~----------  203 (486)
                      +++..|+.++.||                          +..+++++.|..+.+||+.+.+.........          
T Consensus       165 ~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~  244 (775)
T KOG0319|consen  165 ASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLRE  244 (775)
T ss_pred             eecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEech
Confidence            8999999998755                          4568888999999999985433211110000          


Q ss_pred             --CCC-----CCCCccccccccc--------------------------Cce-------eE--------EEEeccCCCcc
Q psy9182         204 --GGP-----PPSGPSIENNWRM--------------------------GKF-------LL--------QRINCRSENSK  235 (486)
Q Consensus       204 --~~~-----~~~~~~~~~~~~~--------------------------~~~-------~~--------~~~~~~~~~~~  235 (486)
                        +..     ...+......|..                          ...       .+        ......-+...
T Consensus       245 ~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~nd  324 (775)
T KOG0319|consen  245 ELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYND  324 (775)
T ss_pred             hcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCch
Confidence              000     0000000000000                          000       00        00001112222


Q ss_pred             ce---EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE-e-cCCEEEEEeCCCcEEEEECCCCc----E
Q psy9182         236 GV---YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ-Y-DERVIISGSSDSTVRVWDVNTGE----M  306 (486)
Q Consensus       236 ~v---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~-~-~~~~l~~~~~dg~i~vwd~~~~~----~  306 (486)
                      .|   ..+.++.+++++++..+.+++|+..+..+. .+.+|...|.++. + +|.+|++|+.|.++++|.++++.    +
T Consensus       325 EI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~  403 (775)
T KOG0319|consen  325 EILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLC  403 (775)
T ss_pred             hheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhh
Confidence            23   334456689999999999999998887776 8899999999998 4 67799999999999999885443    3


Q ss_pred             EEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCce------eeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182         307 VNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEI------TLRRVLVGHRAAVNVVDF--DEKYIVSASG  375 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  375 (486)
                      +....+|.+.|.+++++.   ..+++++.|+++++|++...+..      ........|...|++++.  +..++++|+.
T Consensus       404 ~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~Sq  483 (775)
T KOG0319|consen  404 VAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQ  483 (775)
T ss_pred             hhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEeccc
Confidence            455678999999999973   49999999999999999873221      111234568888998888  7889999999


Q ss_pred             CCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182         376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV  451 (486)
Q Consensus       376 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~  451 (486)
                      |.+.++|+++.......+.+|..++.|+.|.  ++.++++|.|++|+||.+.+..++.++.||...|....|  +++.|+
T Consensus       484 DktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qli  563 (775)
T KOG0319|consen  484 DKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLI  563 (775)
T ss_pred             ccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEE
Confidence            9999999999999999999999999999997  569999999999999999999999999999999999999  999999


Q ss_pred             EEeCCCcEEEEeCCCCCCCCCCccccceeeeeec
Q psy9182         452 SGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVS  485 (486)
Q Consensus       452 s~~~dg~v~iwdl~~~~~~~~~~~~~~~~~~~~~  485 (486)
                      +++.||-|++|++.         +..|..++-+|
T Consensus       564 S~~adGliKlWnik---------t~eC~~tlD~H  588 (775)
T KOG0319|consen  564 SAGADGLIKLWNIK---------TNECEMTLDAH  588 (775)
T ss_pred             eccCCCcEEEEecc---------chhhhhhhhhc
Confidence            99999999999998         45677766554

>KOG0281|consensus

Probab=100.00  E-value=4.4e-42  Score=290.26  Aligned_cols=275  Identities=32%  Similarity=0.641  Sum_probs=246.7

Q ss_pred             cccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeE
Q psy9182         145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLL  224 (486)
Q Consensus       145 h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (486)
                      ...+|.|+.+                 |+..+++|..|++|++||..+.....                           
T Consensus       196 ~skgVYClQY-----------------DD~kiVSGlrDnTikiWD~n~~~c~~---------------------------  231 (499)
T KOG0281|consen  196 NSKGVYCLQY-----------------DDEKIVSGLRDNTIKIWDKNSLECLK---------------------------  231 (499)
T ss_pred             cCCceEEEEe-----------------cchhhhcccccCceEEeccccHHHHH---------------------------
Confidence            3457888887                 55568899999999999975543322                           


Q ss_pred             EEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC
Q psy9182         225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG  304 (486)
Q Consensus       225 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~  304 (486)
                          ...+|...++|+.++.+.+++|+.|.+|++||..++++++++-+|...|..+.|++.++++++.|.++.+||+...
T Consensus       232 ----~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sp  307 (499)
T KOG0281|consen  232 ----ILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASP  307 (499)
T ss_pred             ----hhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCc
Confidence                2347889999999999999999999999999999999999999999999999999999999999999999999765


Q ss_pred             c---EEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEE
Q psy9182         305 E---MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKV  381 (486)
Q Consensus       305 ~---~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i  381 (486)
                      .   +.+.+.+|...|..+.|+..++++++.|.+|++|++.+.+.+   +.+.+|...|.|+.+.++++++|+.|.+|++
T Consensus       308 s~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efv---Rtl~gHkRGIAClQYr~rlvVSGSSDntIRl  384 (499)
T KOG0281|consen  308 TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIRL  384 (499)
T ss_pred             hHHHHHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeee---hhhhcccccceehhccCeEEEecCCCceEEE
Confidence            4   234567899999999999999999999999999999998755   7788999999999999999999999999999


Q ss_pred             EECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCe---------eeEEecCcccCeEEEEecCCEEEE
Q psy9182         382 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRFDAKRIVS  452 (486)
Q Consensus       382 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~l~s  452 (486)
                      ||+..|.+++.+++|..-|.|+.|+.+.+++|+.||+|+|||+..+.         ++..+..|++.|..+.||...+++
T Consensus       385 wdi~~G~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvs  464 (499)
T KOG0281|consen  385 WDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIIS  464 (499)
T ss_pred             EeccccHHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEe
Confidence            99999999999999999999999999999999999999999998764         344556799999999999999999


Q ss_pred             EeCCCcEEEEeCCCCCCC
Q psy9182         453 GAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~~~~  470 (486)
                      ++.|.+|.|||+..+.+.
T Consensus       465 ssHddtILiWdFl~~~~~  482 (499)
T KOG0281|consen  465 SSHDDTILIWDFLNGPPS  482 (499)
T ss_pred             ccCCCeEEEEEcCCCCcc
Confidence            999999999999887543

>KOG0286|consensus

Probab=100.00  E-value=3e-38  Score=261.19  Aligned_cols=279  Identities=26%  Similarity=0.499  Sum_probs=244.0

Q ss_pred             ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccc
Q psy9182         138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW  217 (486)
Q Consensus       138 ~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (486)
                      ..++|+||.+.|.++.|.               .|.++++++|.||.+.|||.-+.....                    
T Consensus        47 ~rr~LkGH~~Ki~~~~ws---------------~Dsr~ivSaSqDGklIvWDs~TtnK~h--------------------   91 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWS---------------TDSRRIVSASQDGKLIVWDSFTTNKVH--------------------   91 (343)
T ss_pred             eEEEecccccceeeeEec---------------CCcCeEEeeccCCeEEEEEccccccee--------------------
Confidence            348999999999999997               688999999999999999964322111                    


Q ss_pred             ccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc------eeeEEEcCCcccEEEEEe-cCCEEEEE
Q psy9182         218 RMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL------QCIKVLTGHTGSVLCLQY-DERVIISG  290 (486)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~v~~~~~-~~~~l~~~  290 (486)
                              .+. ....-.-..+++|.++.+|+|+.|+...||++.+.      ...+.+.+|.+.+.|..| +...|+++
T Consensus        92 --------aip-l~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~  162 (343)
T KOG0286|consen   92 --------AIP-LPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTG  162 (343)
T ss_pred             --------EEe-cCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEec
Confidence                    111 01122234568899999999999999999998865      445678999999999999 88899999


Q ss_pred             eCCCcEEEEECCCCcEEEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--
Q psy9182         291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--  365 (486)
Q Consensus       291 ~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--  365 (486)
                      +.|.+..+||+++++.+..+.+|.+.|.++.++|   +.+++|+-|+..++||++.+...   +.+.+|...|+++.|  
T Consensus       163 SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~---qtF~ghesDINsv~ffP  239 (343)
T KOG0286|consen  163 SGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCV---QTFEGHESDINSVRFFP  239 (343)
T ss_pred             CCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCccee---EeecccccccceEEEcc
Confidence            9999999999999999999999999999999986   59999999999999999998644   788899999999999  


Q ss_pred             CCCEEEEEeCCCcEEEEECCCceEEEEEcCC--cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH--KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       366 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      +|.-+++|+.|++.++||++..+.+..+...  ..+|+++.|+  |++|++|..|.++.+||.-.++.+..+.+|...|+
T Consensus       240 ~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvS  319 (343)
T KOG0286|consen  240 SGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVS  319 (343)
T ss_pred             CCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeE
Confidence            8999999999999999999999888888733  3578888884  99999999999999999999999999999999999


Q ss_pred             EEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         442 CIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       442 ~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ++..  ||.-+++|+.|.+++||.
T Consensus       320 cl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  320 CLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             EEEECCCCcEEEecchhHheeecC
Confidence            9998  999999999999999994

>KOG0296|consensus

Probab=100.00  E-value=1.3e-37  Score=264.90  Aligned_cols=320  Identities=16%  Similarity=0.303  Sum_probs=264.9

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|..+++++..+|+.++++||+.|..-.||++.+|+....+.+|+..|+++.|+               .|+.+|+||.
T Consensus        61 ~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fs---------------hdgtlLATGd  125 (399)
T KOG0296|consen   61 DKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFS---------------HDGTLLATGD  125 (399)
T ss_pred             hhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEc---------------cCceEEEecC
Confidence            4678899999999999999999999999999999999999999999999999997               6888999999


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .+|.|++|+..++.......                             .......=++++|.+..|++|+.||.+.+|.
T Consensus       126 msG~v~v~~~stg~~~~~~~-----------------------------~e~~dieWl~WHp~a~illAG~~DGsvWmw~  176 (399)
T KOG0296|consen  126 MSGKVLVFKVSTGGEQWKLD-----------------------------QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQ  176 (399)
T ss_pred             CCccEEEEEcccCceEEEee-----------------------------cccCceEEEEecccccEEEeecCCCcEEEEE
Confidence            99999999987654332211                             1122334467788889999999999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc-CccEEEEEEc--CCeEEEEeCCCc
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH-CEAVLHLRFS--NGMMVTCSKDRS  335 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~~--~~~l~~~~~dg~  335 (486)
                      +.++...+.+.+|..++++=.|  +|+.++++..||+|++||..+++++..+... .....++.++  +..++.|..++.
T Consensus       177 ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~  256 (399)
T KOG0296|consen  177 IPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGV  256 (399)
T ss_pred             CCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCcc
Confidence            9998889999999999988666  9999999999999999999999999888532 2234455554  558888888888


Q ss_pred             EEEEECCCCCceeeEE-----eeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         336 IAVWDMVSPNEITLRR-----VLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~-----~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      +++-+..+++.+....     ....+...+.++.+     .=.+.|+|+.||+|.|||+...++.+.. .|..+|+.+.|
T Consensus       257 ~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l~w  335 (399)
T KOG0296|consen  257 ACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC-EHEDGVTKLKW  335 (399)
T ss_pred             EEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec-cCCCceEEEEE
Confidence            8888877766543222     11233344444444     3357889999999999999987654444 58888999999


Q ss_pred             CC-CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         406 RD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       406 ~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .+ .+|++++.+|.|+.||.++|+++..+.+|...|.+++.  +.++++|+|.|++.+||++.
T Consensus       336 ~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  336 LNTDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             cCcchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            76 89999999999999999999999999999999999999  88999999999999999875

>KOG0295|consensus

Probab=100.00  E-value=4e-38  Score=267.92  Aligned_cols=292  Identities=28%  Similarity=0.454  Sum_probs=253.1

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      +...++.+.+.|+-..+++++.|++|++||..+|++.+.++||.+.|..++|+               ..+.++++++.|
T Consensus       107 ~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~---------------a~Gk~l~tcSsD  171 (406)
T KOG0295|consen  107 HRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFD---------------ASGKYLATCSSD  171 (406)
T ss_pred             cccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEe---------------cCccEEEecCCc
Confidence            66788899999999999999999999999999999999999999999999997               356789999999


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                      -.+.+||+.+.......                            ...+.+.....++-|.|.++++++.|.+|+.|++.
T Consensus       172 l~~~LWd~~~~~~c~ks----------------------------~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~  223 (406)
T KOG0295|consen  172 LSAKLWDFDTFFRCIKS----------------------------LIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECD  223 (406)
T ss_pred             cchhheeHHHHHHHHHH----------------------------hcCcccceeeEEEEecCCeeeecccccceeEEecc
Confidence            99999998653211100                            11234566667788899999999999999999999


Q ss_pred             CceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEE
Q psy9182         263 SLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD  340 (486)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d  340 (486)
                      ++.+++++.+|...|..+..  ||..+++++.|.+|++|-+.++++...+..|..+|.+++|.+...+....+       
T Consensus       224 tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~-------  296 (406)
T KOG0295|consen  224 TGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISE-------  296 (406)
T ss_pred             cceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhh-------
Confidence            99999999999999998888  899999999999999999999999999999999999999977533221110       


Q ss_pred             CCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCc
Q psy9182         341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT  418 (486)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~  418 (486)
                       .++           ...       .+.++.+++.|++|++||+.++.++.++.+|...|..++++  |+||+++.+|++
T Consensus       297 -at~-----------~~~-------~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDkt  357 (406)
T KOG0295|consen  297 -ATG-----------STN-------GGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKT  357 (406)
T ss_pred             -ccC-----------CCC-------CccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCc
Confidence             000           000       45789999999999999999999999999999999999997  999999999999


Q ss_pred             EEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       419 v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +++||+++++++..+..|..-|+++.|  +-.+++||+-|.++++|.
T Consensus       358 lrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  358 LRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  404 (406)
T ss_pred             EEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence            999999999999999999999999999  556899999999999996

>KOG0286|consensus

Probab=100.00  E-value=2.1e-36  Score=250.23  Aligned_cols=283  Identities=24%  Similarity=0.392  Sum_probs=247.7

Q ss_pred             cccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      -..|..+|.++.+++|.++|++++.||.+.|||.-|...++.+.-....|..++|+               |.++.++.|
T Consensus        51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~s---------------PSg~~VAcG  115 (343)
T KOG0286|consen   51 LKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYS---------------PSGNFVACG  115 (343)
T ss_pred             ecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEEC---------------CCCCeEEec
Confidence            35677889999999999999999999999999999999999998888899999998               688889999


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKV  258 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i  258 (486)
                      +.|+...||++.+.....                         ..+......+|...+.|..+ +...|++++.|.+..+
T Consensus       116 GLdN~Csiy~ls~~d~~g-------------------------~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCal  170 (343)
T KOG0286|consen  116 GLDNKCSIYPLSTRDAEG-------------------------NVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCAL  170 (343)
T ss_pred             CcCceeEEEecccccccc-------------------------cceeeeeecCccceeEEEEEcCCCceEecCCCceEEE
Confidence            999999999986432111                         11111223356777777666 7788999999999999


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCC
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKD  333 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d  333 (486)
                      ||+++++.+..|.+|.+.|.++++   +++.+++|+-|+..++||++.+.+++.+.+|...|.++.|.|+  -+++|+.|
T Consensus       171 WDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD  250 (343)
T KOG0286|consen  171 WDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDD  250 (343)
T ss_pred             EEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCC
Confidence            999999999999999999999887   7799999999999999999999999999999999999999875  89999999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCE
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRL  409 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~  409 (486)
                      ++.++||++...++.... .......|++++|  .|++|++|..|.++.+||.-.++.+..+.+|.+.|+|+..  +|..
T Consensus       251 ~tcRlyDlRaD~~~a~ys-~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~a  329 (343)
T KOG0286|consen  251 ATCRLYDLRADQELAVYS-HDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMA  329 (343)
T ss_pred             ceeEEEeecCCcEEeeec-cCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcE
Confidence            999999999988765443 3445678899999  8999999999999999999999999999999999999877  6899


Q ss_pred             EEEEeCCCcEEEEE
Q psy9182         410 VVSGSSDNTIRLWD  423 (486)
Q Consensus       410 l~~~~~dg~v~iwd  423 (486)
                      +++|+.|.+++||.
T Consensus       330 v~TgSWDs~lriW~  343 (343)
T KOG0286|consen  330 VATGSWDSTLRIWA  343 (343)
T ss_pred             EEecchhHheeecC
Confidence            99999999999994

>KOG0315|consensus

Probab=100.00  E-value=1.8e-36  Score=245.12  Aligned_cols=268  Identities=22%  Similarity=0.370  Sum_probs=223.1

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSE  195 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~  195 (486)
                      .-+|++++.|.+||+|...+|.+.++++.....|..+..                                         
T Consensus        10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLei-----------------------------------------   48 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEI-----------------------------------------   48 (311)
T ss_pred             ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEE-----------------------------------------
Confidence            348999999999999999999999998877777766654                                         


Q ss_pred             cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCC
Q psy9182         196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGH  273 (486)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~  273 (486)
                                                                   .++++.||+++. -.|++||+.++.  ++.++.+|
T Consensus        49 ---------------------------------------------Tpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h   82 (311)
T KOG0315|consen   49 ---------------------------------------------TPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGH   82 (311)
T ss_pred             ---------------------------------------------cCCcchhhhccC-CeeEEEEccCCCCCceeEEecc
Confidence                                                         345666666654 469999988765  57889999


Q ss_pred             cccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceee
Q psy9182         274 TGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITL  349 (486)
Q Consensus       274 ~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~  349 (486)
                      ...|+++.|  +|+.+++|+.||+++|||++...+.+.++. ..+|.++..+|+  .|++|..+|.|++||+....... 
T Consensus        83 ~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~-~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~-  160 (311)
T KOG0315|consen   83 TKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQH-NSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH-  160 (311)
T ss_pred             CCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccC-CCCcceEEecCCcceEEeecCCCcEEEEEccCCcccc-
Confidence            999999999  899999999999999999999766666654 599999999876  89999999999999998764332 


Q ss_pred             EEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc------eEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcE
Q psy9182         350 RRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC------EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI  419 (486)
Q Consensus       350 ~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v  419 (486)
                       .........|.++..  ||.+++.+...|+.++|++-+.      +++..++.|.+-+....+  ++++||+++.|.++
T Consensus       161 -~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv  239 (311)
T KOG0315|consen  161 -ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTV  239 (311)
T ss_pred             -ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceE
Confidence             233344566666665  9999999999999999998653      466778899988766555  68999999999999


Q ss_pred             EEEECCCC-eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCCCC
Q psy9182         420 RLWDIECG-ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAP  473 (486)
Q Consensus       420 ~iwd~~~~-~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~~~  473 (486)
                      +||+.++. +....+++|...+...+|  ||.||++|+.|+.+++||+..+.+.+..
T Consensus       240 ~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy  296 (311)
T KOG0315|consen  240 KIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQY  296 (311)
T ss_pred             EEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeec
Confidence            99999987 666788999999999999  9999999999999999999998765543

>KOG0318|consensus

Probab=100.00  E-value=2.9e-35  Score=261.90  Aligned_cols=346  Identities=22%  Similarity=0.326  Sum_probs=263.0

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeec---CcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN---GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~---~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      ..|.+-+.|+-++|||.++||.+.||.|.++|=.+|+.+..|.   +|++.|.+++|+               ||+.+++
T Consensus       187 r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWs---------------PDs~~~~  251 (603)
T KOG0318|consen  187 REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWS---------------PDSTQFL  251 (603)
T ss_pred             cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEEC---------------CCCceEE
Confidence            4455667899999999999999999999999999999999998   899999999998               7999999


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEE---------------EEeccCCCccceEEEEe
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQ---------------RINCRSENSKGVYCLQY  242 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~v~~~~~  242 (486)
                      +++.|.++++||+.+............   .........|+......-               .+....+|...+.++.-
T Consensus       252 T~SaDkt~KIWdVs~~slv~t~~~~~~---v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv  328 (603)
T KOG0318|consen  252 TVSADKTIKIWDVSTNSLVSTWPMGST---VEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTV  328 (603)
T ss_pred             EecCCceEEEEEeeccceEEEeecCCc---hhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEE
Confidence            999999999999988765544433321   222334445553332221               12234566777777777


Q ss_pred             --CCCEEEEEecCCeEEEEECCCceeeEEE-cCCcccEEEEEecC-CEEEEEeCCCcEEEEECCCCcE------------
Q psy9182         243 --DDHKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQYDE-RVIISGSSDSTVRVWDVNTGEM------------  306 (486)
Q Consensus       243 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~------------  306 (486)
                        ++++|++|+.||.|.-|+..++..-+.. ++|...|.+++..+ ..+++.+.|.++++.++..+..            
T Consensus       329 ~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP  408 (603)
T KOG0318|consen  329 SPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQP  408 (603)
T ss_pred             cCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCc
Confidence              5677888888888888887777766665 56777788877743 6677777777788776632110            


Q ss_pred             E-------------------EEeccc--------CccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCc
Q psy9182         307 V-------------------NTLIHH--------CEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR  357 (486)
Q Consensus       307 ~-------------------~~~~~~--------~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~  357 (486)
                      .                   ..++.+        .-...++++++  +.+++|+.|+.|++|.+...+. ........|.
T Consensus       409 ~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l-~ee~~~~~h~  487 (603)
T KOG0318|consen  409 KGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDEL-KEEAKLLEHR  487 (603)
T ss_pred             eeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcc-cceeeeeccc
Confidence            0                   000000        01123445544  4899999999999999987654 2334567899


Q ss_pred             ccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE-EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCC-eeeE
Q psy9182         358 AAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG-ACLR  431 (486)
Q Consensus       358 ~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~-~~~~  431 (486)
                      ..++++++  |+.+|+++...+.+.+||..+.+... .+.-|...|.|++|+  +.++|+|+.|-.|.||+++.. +.+.
T Consensus       488 a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~  567 (603)
T KOG0318|consen  488 AAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHII  567 (603)
T ss_pred             CCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheE
Confidence            99999999  89999999999999999999887633 334599999999996  678999999999999999764 3455


Q ss_pred             EecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCC
Q psy9182         432 VLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       432 ~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ...+|...|+.+.| |.+.|++.|.|..|++|++.
T Consensus       568 iknAH~~gVn~v~wlde~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  568 IKNAHLGGVNSVAWLDESTVVSSGQDANIKVWNVT  602 (603)
T ss_pred             eccccccCceeEEEecCceEEeccCcceeEEeccc
Confidence            55789989999999 99999999999999999974

>KOG0272|consensus

Probab=100.00  E-value=4.5e-37  Score=266.37  Aligned_cols=242  Identities=23%  Similarity=0.437  Sum_probs=222.0

Q ss_pred             CCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEE
Q psy9182         232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMV  307 (486)
Q Consensus       232 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~  307 (486)
                      ..+.....++.+++.|++|+.+|.+++|+..+...+.++.+|...+.++.|    ++..+++|+.||++++|++.+..++
T Consensus       175 ~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l  254 (459)
T KOG0272|consen  175 TRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPL  254 (459)
T ss_pred             CCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcch
Confidence            455667778889999999999999999999999999999999999999999    2568999999999999999999999


Q ss_pred             EEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEE
Q psy9182         308 NTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN  383 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd  383 (486)
                      ..+.+|...|..++|+|+  +|++++.|.+-++||++++.+.   ....+|...|.+++|  ||.++++|+.|..-+|||
T Consensus       255 ~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El---L~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWD  331 (459)
T KOG0272|consen  255 QDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL---LLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWD  331 (459)
T ss_pred             hhhhcchhhheeeeecCCCceeeecccccchhhcccccchhh---HhhcccccccceeEecCCCceeeccCccchhheee
Confidence            999999999999999865  9999999999999999998766   445699999999999  999999999999999999


Q ss_pred             CCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCc
Q psy9182         384 TSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGK  458 (486)
Q Consensus       384 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~  458 (486)
                      +++|+++..+.+|...|..+.|+  |..||+|+.|++++|||++....+..+.+|..-|+.|.|   .|.+|+|++.|++
T Consensus       332 lRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t  411 (459)
T KOG0272|consen  332 LRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNT  411 (459)
T ss_pred             cccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcc
Confidence            99999999999999999999995  789999999999999999999999999999999999999   5788999999999


Q ss_pred             EEEEeCCCCCCCCCCccccceeeeeec
Q psy9182         459 IKVWNLVAALDPRAPTTTLCLRTLVVS  485 (486)
Q Consensus       459 v~iwdl~~~~~~~~~~~~~~~~~~~~~  485 (486)
                      +++|.-.+         ..|+++|.||
T Consensus       412 ~kiWs~~~---------~~~~ksLaGH  429 (459)
T KOG0272|consen  412 VKIWSTRT---------WSPLKSLAGH  429 (459)
T ss_pred             eeeecCCC---------cccchhhcCC
Confidence            99999874         4555555554

>KOG0279|consensus

Probab=100.00  E-value=1.1e-34  Score=238.60  Aligned_cols=286  Identities=24%  Similarity=0.452  Sum_probs=233.6

Q ss_pred             cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccc
Q psy9182         137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN  216 (486)
Q Consensus       137 ~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (486)
                      .+..++++|.+.|+.++...              .+...+++++.|.++.+|++....                      
T Consensus         6 ~l~~tl~gh~d~Vt~la~~~--------------~~~~~l~sasrDk~ii~W~L~~dd----------------------   49 (315)
T KOG0279|consen    6 VLRGTLEGHTDWVTALAIKI--------------KNSDILVSASRDKTIIVWKLTSDD----------------------   49 (315)
T ss_pred             eeeeeecCCCceEEEEEeec--------------CCCceEEEcccceEEEEEEeccCc----------------------
Confidence            34567899999999998753              245678999999999999985431                      


Q ss_pred             cccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182         217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS  294 (486)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  294 (486)
                      +..+ ...+++.. +.|...-..+++++++.++++.|+++++||+.+++..+.|.+|...|.++++  |++.+++|+.|.
T Consensus        50 ~~~G-~~~r~~~G-HsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDk  127 (315)
T KOG0279|consen   50 IKYG-VPVRRLTG-HSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDK  127 (315)
T ss_pred             cccC-ceeeeeec-cceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcc
Confidence            1111 12233333 4566666778999999999999999999999999999999999999999999  788999999999


Q ss_pred             cEEEEECCCCcEEEEeccc--CccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C
Q psy9182         295 TVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D  366 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~  366 (486)
                      +|++||+.. .+..++...  .+.|.|+.|+|+    .++.++.|+.|++||+++-+..   ..+.+|...++.+.+  |
T Consensus       128 Tiklwnt~g-~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~---~~~~gh~~~v~t~~vSpD  203 (315)
T KOG0279|consen  128 TIKLWNTLG-VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLR---TTFIGHSGYVNTVTVSPD  203 (315)
T ss_pred             eeeeeeecc-cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchh---hccccccccEEEEEECCC
Confidence            999999874 455555433  789999999986    8999999999999999887543   667789999998888  9


Q ss_pred             CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCCeeeEEecCc---------
Q psy9182         367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGH---------  436 (486)
Q Consensus       367 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~h---------  436 (486)
                      |...++|+.||.+.+||++.++.+..+. |...|.++.|.+ ++.+.+..+..|+|||+.++.++..++..         
T Consensus       204 GslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~  282 (315)
T KOG0279|consen  204 GSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAG  282 (315)
T ss_pred             CCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccC
Confidence            9999999999999999999999977776 778899999974 55556666777999999999888766421         


Q ss_pred             ccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         437 EELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       437 ~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .....+++|  ||..|++|-.|+.|++|.+.
T Consensus       283 ~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  283 DPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             CcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            123456677  89999999999999999985

>KOG0291|consensus

Probab=100.00  E-value=1.9e-34  Score=267.12  Aligned_cols=348  Identities=20%  Similarity=0.360  Sum_probs=277.5

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccc--eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~--~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      .|-.+++++.++.|.++|++|+.|-+++||++...+-  ...+.+|+..|....|.               .+...+++.
T Consensus       143 g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~---------------~~~~~l~tv  207 (893)
T KOG0291|consen  143 GHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFG---------------ANSLDLYTV  207 (893)
T ss_pred             CCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEec---------------cCcceEEEE
Confidence            4557899999999999999999999999999987665  66788999999998885               456669999


Q ss_pred             CCCCcceeeecccccccccCCCC--CCCC-CCCCcccccccccCceeEEEEeccCCCccceEEEE--eCCCEEEEEecCC
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGG--GGGP-PPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQ--YDDHKIVSGLRDN  254 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg  254 (486)
                      +.||.+.+|.++...........  .+.. .......+......................+.|.+  +..+.|++|-.+|
T Consensus       208 skdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG  287 (893)
T KOG0291|consen  208 SKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSG  287 (893)
T ss_pred             ecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCC
Confidence            99999999998643111111100  0000 00000001100001111111122223334555544  4567899999999


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEeCC-CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSD-STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVT  329 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~  329 (486)
                      ...+|++....++..+.-....|..++++  |+.++.|+.. |.+.||+..+...+.+.++|...+.+++++|+  ++++
T Consensus       288 ~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaT  367 (893)
T KOG0291|consen  288 EFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIAT  367 (893)
T ss_pred             eeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEe
Confidence            99999999999999998888899999995  9999998876 89999999999999999999999999999987  9999


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-cEEEEEeC
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYR  406 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~  406 (486)
                      |+.||.|++||..++-+.   ..+..|...|+.+.|  .++.+++.+.||+|+.||+...+..+++..... ...|++.+
T Consensus       368 G~eDgKVKvWn~~SgfC~---vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD  444 (893)
T KOG0291|consen  368 GAEDGKVKVWNTQSGFCF---VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVD  444 (893)
T ss_pred             ccCCCcEEEEeccCceEE---EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEc
Confidence            999999999999888544   678899999999999  899999999999999999999999999986553 44667766


Q ss_pred             --CCEEEEEeCCC-cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         407 --DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       407 --~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                        |.++.+|+.|. .|.+|++++|+.+-.+.||+++|.+++|  ++..|+++|.|.+||+||+-..
T Consensus       445 ~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s  510 (893)
T KOG0291|consen  445 PSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS  510 (893)
T ss_pred             CCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence              89999998876 5999999999999999999999999888  8999999999999999998765

>KOG0319|consensus

Probab=100.00  E-value=1.2e-35  Score=274.50  Aligned_cols=361  Identities=21%  Similarity=0.395  Sum_probs=269.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec-------ceeEecCCCCceeccC-
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-------RLVVSGSSDNTIRYRD-  172 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~-------~~~~~~~~d~~i~~~~-  172 (486)
                      ..|...++++++++|+.-+++++.|..+.|||+.+.+..+++.--. .+.++.+-.       .++++++.+|.+++++ 
T Consensus       189 ~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye-~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~  267 (775)
T KOG0319|consen  189 ILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYE-SLESVVRLREELGGKGEYIITAGGSGVVQYWDS  267 (775)
T ss_pred             HhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhh-heeeEEEechhcCCcceEEEEecCCceEEEEec
Confidence            4567789999999999999999999999999998877777665333 445555532       2566666666655533 


Q ss_pred             -------------------------cceeecCCCCCcceeeecccccccccCCCCCCCC--------CCCCccccccccc
Q psy9182         173 -------------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGP--------PPSGPSIENNWRM  219 (486)
Q Consensus       173 -------------------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~  219 (486)
                                               ...++....|..+.++|.++........+.....        .........  ..
T Consensus       268 es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVAT--Ns  345 (775)
T KOG0319|consen  268 ESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVAT--NS  345 (775)
T ss_pred             ccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEe--CC
Confidence                                     1234444455556666554433222221111100        000000000  01


Q ss_pred             CceeEEEE-----eccCCCccceEEEE--eCCCEEEEEecCCeEEEEECCCc----eeeEEEcCCcccEEEEEe---cCC
Q psy9182         220 GKFLLQRI-----NCRSENSKGVYCLQ--YDDHKIVSGLRDNTIKVWDRVSL----QCIKVLTGHTGSVLCLQY---DER  285 (486)
Q Consensus       220 ~~~~~~~~-----~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~v~~~~~---~~~  285 (486)
                      +...+...     ....+|...++++.  .+|.+|++|+.|.++++|.++++    .++....+|.+.|.+++.   ...
T Consensus       346 ~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~as  425 (775)
T KOG0319|consen  346 PELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGAS  425 (775)
T ss_pred             CceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCcc
Confidence            11111110     12346777888887  46679999999999999976433    345667799999999988   457


Q ss_pred             EEEEEeCCCcEEEEECCCCcE-----EE----EecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeee
Q psy9182         286 VIISGSSDSTVRVWDVNTGEM-----VN----TLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLV  354 (486)
Q Consensus       286 ~l~~~~~dg~i~vwd~~~~~~-----~~----~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  354 (486)
                      ++++++.|+++++|++...+.     ..    ....|...|.+++++|+  ++++|+.|++.++|++...   .....+.
T Consensus       426 ffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~---~l~~vLs  502 (775)
T KOG0319|consen  426 FFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL---RLLGVLS  502 (775)
T ss_pred             EEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCc---eEEEEee
Confidence            999999999999999975211     11    22468889999999865  9999999999999999844   4558889


Q ss_pred             cCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeee
Q psy9182         355 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACL  430 (486)
Q Consensus       355 ~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~  430 (486)
                      +|...+.++.|  ..+.+++++.|++|+||.+.++.++++|.+|...|...+|  ++..|++++.||.|++|++++++|+
T Consensus       503 GH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~  582 (775)
T KOG0319|consen  503 GHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECE  582 (775)
T ss_pred             CCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhh
Confidence            99999999999  5679999999999999999999999999999999988888  6999999999999999999999999


Q ss_pred             EEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         431 RVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .++.+|.+.|++++-  ...+++||+.||.|.+|.=.+.
T Consensus       583 ~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te  621 (775)
T KOG0319|consen  583 MTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTE  621 (775)
T ss_pred             hhhhhccceeEEEeecCccceeEecCCCeEEEEeecCcH
Confidence            999999999999998  6678999999999999985443

>KOG0273|consensus

Probab=100.00  E-value=1.5e-34  Score=254.08  Aligned_cols=312  Identities=22%  Similarity=0.388  Sum_probs=267.2

Q ss_pred             ccccccccCCccCcc-eEEEeecCceeeeccccc--cc--ceeeec------C----cccceeEEEeecceeEecCCCCc
Q psy9182         103 LQRDFISLLPNFDEK-YIVSASGDRTIKVWNTSS--CE--FVRTLN------G----HKRGIACLQYRDRLVVSGSSDNT  167 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~-~l~tg~~dg~v~iWd~~~--~~--~~~~l~------~----h~~~V~~~~~~~~~~~~~~~d~~  167 (486)
                      |...|++.+++|-.. .+++|+.|-+.++|++..  +.  ....|+      +    ....|++++|+            
T Consensus       177 ~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn------------  244 (524)
T KOG0273|consen  177 HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWN------------  244 (524)
T ss_pred             CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEec------------
Confidence            778899999999887 999999999999999864  11  111111      1    23579999997            


Q ss_pred             eeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe--CCC
Q psy9182         168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY--DDH  245 (486)
Q Consensus       168 i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~  245 (486)
                         .+|..|++|+.||.+++|+.....                                +.....|..+|+++.+  .|.
T Consensus       245 ---~~G~~LatG~~~G~~riw~~~G~l--------------------------------~~tl~~HkgPI~slKWnk~G~  289 (524)
T KOG0273|consen  245 ---NDGTLLATGSEDGEARIWNKDGNL--------------------------------ISTLGQHKGPIFSLKWNKKGT  289 (524)
T ss_pred             ---CCCCeEEEeecCcEEEEEecCchh--------------------------------hhhhhccCCceEEEEEcCCCC
Confidence               578889999999999999963321                                1122356777888777  578


Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~  324 (486)
                      +|++++.||++.+||..+++..+.+.-|..+-..+.| +...+++.+.||.|+|+.+....++.++.+|.+.|.++.|++
T Consensus       290 yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~  369 (524)
T KOG0273|consen  290 YILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNP  369 (524)
T ss_pred             EEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECC
Confidence            8999999999999999999999999999888788889 778999999999999999999999999999999999999995


Q ss_pred             --CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----------CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         325 --GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----------DEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       325 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----------~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                        .+|++++.|++++||.+......   ..+..|...|..+.|           .+..+++++.|++|++||+..+.++.
T Consensus       370 tg~LLaS~SdD~TlkiWs~~~~~~~---~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~  446 (524)
T KOG0273|consen  370 TGSLLASCSDDGTLKIWSMGQSNSV---HDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIH  446 (524)
T ss_pred             CCceEEEecCCCeeEeeecCCCcch---hhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeE
Confidence              59999999999999998766544   556678888888777           34589999999999999999999999


Q ss_pred             EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .|..|..+|.+++++  ++++|+|+.||.|.+|+.++++.++...+. +.|..++|  +|+.|..+-.||.+++-|++
T Consensus       447 ~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  447 TLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             eeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            999999999999995  999999999999999999999999998764 55999999  88999999999999999985

>KOG0285|consensus

Probab=100.00  E-value=2.3e-35  Score=250.54  Aligned_cols=277  Identities=27%  Similarity=0.460  Sum_probs=243.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|-.=|.|+++.|.+.+++||+.|++++|||+.+|++..++.||...|..+++++                        
T Consensus       148 ~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~------------------------  203 (460)
T KOG0285|consen  148 SGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK------------------------  203 (460)
T ss_pred             hhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc------------------------
Confidence            34556678999999999999999999999999999999999999999999998852                        


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                    --.++++++.|+.|+.||
T Consensus       204 --------------------------------------------------------------rHpYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  204 --------------------------------------------------------------RHPYLFSAGEDKQVKCWD  221 (460)
T ss_pred             --------------------------------------------------------------cCceEEEecCCCeeEEEe
Confidence                                                                          224788999999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSI  336 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i  336 (486)
                      ++..+.++.+.+|-..|.|++..  -+.|++|+.|.++++||+++...+..+.+|..+|..+.+.  +..+++|+.|++|
T Consensus       222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tv  301 (460)
T KOG0285|consen  222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTV  301 (460)
T ss_pred             chhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceE
Confidence            99999999999999999999985  6789999999999999999999999999999999999998  5699999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSG  413 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~  413 (486)
                      ++||++.++..   ..+..|...+.++...  ...+++++.| .|+-|++..+..+..+.+|...+.+++.+ +.++++|
T Consensus       302 rlWDl~agkt~---~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G  377 (460)
T KOG0285|consen  302 RLWDLRAGKTM---ITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSG  377 (460)
T ss_pred             EEeeeccCcee---EeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEc
Confidence            99999998755   5566788899888884  4567777665 69999999999999999999999999996 7899999


Q ss_pred             eCCCcEEEEECCCCeeeEEecC--------cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         414 SSDNTIRLWDIECGACLRVLEG--------HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       414 ~~dg~v~iwd~~~~~~~~~~~~--------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++.|.+.+||.++|-..+....        .+..|.+.+|  .|.+|++|..|.+|++|.=+..
T Consensus       378 ~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~  441 (460)
T KOG0285|consen  378 GDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH  441 (460)
T ss_pred             CCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence            9999999999999876655421        2457888999  7789999999999999986543

>KOG0274|consensus

Probab=100.00  E-value=1.6e-34  Score=275.65  Aligned_cols=278  Identities=35%  Similarity=0.600  Sum_probs=255.0

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceee-ecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~-l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      +...+++..+.  ..++++++.|++|++||..++..+.. +.||.+.|.++++..                         
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~-------------------------  259 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPS-------------------------  259 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEec-------------------------
Confidence            44566666666  66899999999999999999999888 999999999998831                         


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                   .+.++++|+.|.++++||.
T Consensus       260 -------------------------------------------------------------~~~~lvsgS~D~t~rvWd~  278 (537)
T KOG0274|consen  260 -------------------------------------------------------------GGDKLVSGSTDKTERVWDC  278 (537)
T ss_pred             -------------------------------------------------------------CCCEEEEEecCCcEEeEec
Confidence                                                                         2456889999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEEC
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~  341 (486)
                      .++++...+.+|.+.+.++...+..+++|+.|.+|++|++.++..+..+.+|..+|.++....+.+++|+.|+.|++||+
T Consensus       279 ~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~  358 (537)
T KOG0274|consen  279 STGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDP  358 (537)
T ss_pred             CCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceeeEEeeecCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI  419 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v  419 (486)
                      .+++.+   ..+.+|...|.++.+++ ..+++|+.|++|++||+++. +++..+.+|...+..+...+++|++++.|+.|
T Consensus       359 ~~~~cl---~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~I  435 (537)
T KOG0274|consen  359 RTGKCL---KSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSSADGTI  435 (537)
T ss_pred             hhceee---eeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccceeEeccccccE
Confidence            977654   77889999999999988 99999999999999999999 99999999999999999999999999999999


Q ss_pred             EEEECCCCeeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCCCCCCCC
Q psy9182         420 RLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPR  471 (486)
Q Consensus       420 ~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~~~~  471 (486)
                      ++||..+++++..+.+ |...|.++++....+++++.||.+++||++++...+
T Consensus       436 k~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~~~~  488 (537)
T KOG0274|consen  436 KLWDAEEGECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLRSGTLIR  488 (537)
T ss_pred             EEeecccCceeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecccCchhh
Confidence            9999999999999999 678999999977888899999999999999876543

>KOG0273|consensus

Probab=100.00  E-value=2.9e-34  Score=252.29  Aligned_cols=298  Identities=25%  Similarity=0.480  Sum_probs=242.9

Q ss_pred             eeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccccc
Q psy9182         140 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRM  219 (486)
Q Consensus       140 ~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (486)
                      +.+. |..+|.+.+|+|-              ....+++++.|-..++|++...........          ......+.
T Consensus       173 kvl~-~~~~V~~~~WnP~--------------~~~llasg~~~s~ari~~l~e~~~~~~~q~----------~lrh~~~~  227 (524)
T KOG0273|consen  173 KVLR-HESEVFICAWNPL--------------RDGLLASGSGDSTARIWNLLENSNIGSTQL----------VLRHCIRE  227 (524)
T ss_pred             eecc-CCCceEEEecCch--------------hhhhhhccCCccceeeeeehhhccccchhh----------hhhhhhhh
Confidence            3344 9999999999862              334689999999999999853110000000          00000000


Q ss_pred             CceeEEEEeccCCCccceEEEEe--CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCc
Q psy9182         220 GKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDST  295 (486)
Q Consensus       220 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~  295 (486)
                      +.       ........+.++++  +|..||+|+.||.++||+. .|..+.++..|.++|.++.|  +|++|++++.||+
T Consensus       228 ~~-------~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~t  299 (524)
T KOG0273|consen  228 GG-------KSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGT  299 (524)
T ss_pred             hc-------ccCCccCCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCcc
Confidence            00       00012334555555  5999999999999999985 57778889999999999999  6889999999999


Q ss_pred             EEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEE
Q psy9182         296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVS  372 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~  372 (486)
                      +.+||..+++....+..|..+..++.|- ++.+++++.|+.|+++.+....+.   ..+.+|.+.|.++.|+  +.+|++
T Consensus       300 tilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~---~t~~GH~g~V~alk~n~tg~LLaS  376 (524)
T KOG0273|consen  300 TILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPV---KTFIGHHGEVNALKWNPTGSLLAS  376 (524)
T ss_pred             EEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcc---eeeecccCceEEEEECCCCceEEE
Confidence            9999999999999999998887888886 569999999999999999876654   5667899999999996  899999


Q ss_pred             EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-----------CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-----------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      ++.|++++||+.........+.+|...|..+.|.           +..+++++.|++|++||+..|.++..|..|..+|.
T Consensus       377 ~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVy  456 (524)
T KOG0273|consen  377 CSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVY  456 (524)
T ss_pred             ecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceE
Confidence            9999999999999999999999999999888883           45799999999999999999999999999999999


Q ss_pred             EEEe--cCCEEEEEeCCCcEEEEeCCCCCCCCCC
Q psy9182         442 CIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAP  473 (486)
Q Consensus       442 ~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~~~  473 (486)
                      +++|  +|.++++|+.||.|++|+.+++.-.+..
T Consensus       457 svafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~  490 (524)
T KOG0273|consen  457 SVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSY  490 (524)
T ss_pred             EEEecCCCcEEEecCCCCeeEeccccchheeEee
Confidence            9999  8999999999999999999987654443

>KOG0316|consensus

Probab=100.00  E-value=7.3e-34  Score=228.14  Aligned_cols=271  Identities=23%  Similarity=0.377  Sum_probs=232.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..++..+.++-++-||+|.++++.|.+|++|+...|.+++++.+|...|..++.                          
T Consensus        14 ~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~--------------------------   67 (307)
T KOG0316|consen   14 DCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAAL--------------------------   67 (307)
T ss_pred             cccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccc--------------------------
Confidence            456778899999999999999999999999999999999999999988876654                          


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                  +.|...+++++.|..+.+||
T Consensus        68 ------------------------------------------------------------s~Dnskf~s~GgDk~v~vwD   87 (307)
T KOG0316|consen   68 ------------------------------------------------------------SSDNSKFASCGGDKAVQVWD   87 (307)
T ss_pred             ------------------------------------------------------------cccccccccCCCCceEEEEE
Confidence                                                                        23556688888999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC--CcEEEEecccCccEEEEEEcCCeEEEEeCCCcE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT--GEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI  336 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~--~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i  336 (486)
                      +.+|+.++.+.+|.+.|+.+.|  +...+++|+-|..+++||-++  .++++.+......|.++...+..+++|+.||++
T Consensus        88 V~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtv  167 (307)
T KOG0316|consen   88 VNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTV  167 (307)
T ss_pred             cccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEeeccCCcE
Confidence            9999999999999999999999  457899999999999999875  467888888889999999999999999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE----EEEeCCCEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA----CLQYRDRLV  410 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~----~~~~~~~~l  410 (486)
                      +.||++.+...   .-.  ...+|+++++  +++..++++.|+++++.|-.+|+++..+++|...-.    |+.-+...+
T Consensus       168 RtydiR~G~l~---sDy--~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV  242 (307)
T KOG0316|consen  168 RTYDIRKGTLS---SDY--FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHV  242 (307)
T ss_pred             EEEEeecceee---hhh--cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeE
Confidence            99999998644   222  3456777777  899999999999999999999999999999987543    333357889


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEecCcccC-eEEEEecCCE--EEEEeCCCcEEEEe
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCIRFDAKR--IVSGAYDGKIKVWN  463 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~--l~s~~~dg~v~iwd  463 (486)
                      ++|++||.|++||+.....+..+..+... |.++++.++.  |+++. ++.+.+|-
T Consensus       243 ~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~-~~~~~~~~  297 (307)
T KOG0316|consen  243 FSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT-GHGDLFWY  297 (307)
T ss_pred             EeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEec-CCceecee
Confidence            99999999999999999999999988887 8899995543  66665 45566665

>KOG0265|consensus

Probab=100.00  E-value=1.4e-33  Score=234.47  Aligned_cols=278  Identities=25%  Similarity=0.433  Sum_probs=239.3

Q ss_pred             hhhcccccccccccCCccCcceEEEeecCceeeeccc-ccccceeeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182          97 TYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus        97 ~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~-~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      ....+.|+..|..+.|+|+|.+||||+.|..|.+|+. ...+-...+++|.++|..+.|.                    
T Consensus        40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~--------------------   99 (338)
T KOG0265|consen   40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGM--------------------   99 (338)
T ss_pred             hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeec--------------------
Confidence            3455788999999999999999999999999999995 4455677889999999988874                    


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                                                                                        .|+..+++++.|.+
T Consensus       100 ------------------------------------------------------------------~d~s~i~S~gtDk~  113 (338)
T KOG0265|consen  100 ------------------------------------------------------------------RDGSHILSCGTDKT  113 (338)
T ss_pred             ------------------------------------------------------------------cCCCEEEEecCCce
Confidence                                                                              36677888999999


Q ss_pred             EEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEE
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC  330 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~  330 (486)
                      |+.||.++|++++.+++|..-|.++.+   ...++.+++.||++++||+++.+.++++.. .-.++++.|..  +.+++|
T Consensus       114 v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s~qv~sg  192 (338)
T KOG0265|consen  114 VRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTSDQVISG  192 (338)
T ss_pred             EEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEecccccceeec
Confidence            999999999999999999999999887   457889999999999999999888887754 56788999974  599999


Q ss_pred             eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC----ceEEEEEcCCccc----E
Q psy9182         331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS----CEFVRTLNGHKRG----I  400 (486)
Q Consensus       331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~----v  400 (486)
                      +-|+.|++||++.+...   ..+.+|...|+.+..  +|.++.+-+.|.++++||++.    .+++..+.+|...    .
T Consensus       193 gIdn~ikvWd~r~~d~~---~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknl  269 (338)
T KOG0265|consen  193 GIDNDIKVWDLRKNDGL---YTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNL  269 (338)
T ss_pred             cccCceeeeccccCcce---EEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhc
Confidence            99999999999988754   678899999999988  899999999999999999875    3457777766532    2


Q ss_pred             EEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         401 ACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       401 ~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      ...+|  ++..+.+|+.|..+++||..+...+..+.+|.+.|+++.|  ....|.+++.|.+|.+=++
T Consensus       270 L~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei  337 (338)
T KOG0265|consen  270 LKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI  337 (338)
T ss_pred             ceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence            33344  5788999999999999999998999999999999999999  6677999999999987443

>KOG0263|consensus

Probab=100.00  E-value=4e-34  Score=267.09  Aligned_cols=271  Identities=26%  Similarity=0.559  Sum_probs=231.1

Q ss_pred             eecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccC
Q psy9182         141 TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMG  220 (486)
Q Consensus       141 ~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (486)
                      ++..-...++|..|+               .|+.++|.|..|..|++|.+...+........                  
T Consensus       373 T~~nt~~~v~ca~fS---------------ddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~------------------  419 (707)
T KOG0263|consen  373 TFHNTYQGVTCAEFS---------------DDSSMLACGFVDSSVRVWSLTPKKLKKLKDAS------------------  419 (707)
T ss_pred             EEEEcCCcceeEeec---------------CCcchhhccccccEEEEEecchhhhccccchh------------------
Confidence            333334478888886               46778999999999999998643322221111                  


Q ss_pred             ceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEE
Q psy9182         221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRV  298 (486)
Q Consensus       221 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~v  298 (486)
                                            +-..+=+.+.|-.+.+.|-.+....+++.+|.++|...+|  +.++|++++.|+++++
T Consensus       420 ----------------------~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRL  477 (707)
T KOG0263|consen  420 ----------------------DLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRL  477 (707)
T ss_pred             ----------------------hhccccccccchhhhhccccCCceeEEeecCCCceeeeeecccccceeeccCCcceee
Confidence                                  1111223445555777777777777889999999998888  7899999999999999


Q ss_pred             EECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      |.+.+..++..+++|..+|.++.|+|.  ++++++.|++-++|........   +.+.+|-..|.|+.|  +..|+++|+
T Consensus       478 Wsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~Pl---RifaghlsDV~cv~FHPNs~Y~aTGS  554 (707)
T KOG0263|consen  478 WSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPL---RIFAGHLSDVDCVSFHPNSNYVATGS  554 (707)
T ss_pred             eecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCch---hhhcccccccceEEECCcccccccCC
Confidence            999999999999999999999999975  9999999999999998875543   778899999999999  788999999


Q ss_pred             CCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEE
Q psy9182         375 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI  450 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l  450 (486)
                      .|.++++||+.+|..++.|.+|.++|.++.++  |++|++|+.||.|.+||+.+++++..+.+|++.|.+|.|  ||+.|
T Consensus       555 sD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vL  634 (707)
T KOG0263|consen  555 SDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVL  634 (707)
T ss_pred             CCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEE
Confidence            99999999999999999999999999999884  999999999999999999999999999999999999999  99999


Q ss_pred             EEEeCCCcEEEEeCCCCCC
Q psy9182         451 VSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       451 ~s~~~dg~v~iwdl~~~~~  469 (486)
                      |+||.|.+|++||+.....
T Consensus       635 asgg~DnsV~lWD~~~~~~  653 (707)
T KOG0263|consen  635 ASGGADNSVRLWDLTKVIE  653 (707)
T ss_pred             EecCCCCeEEEEEchhhcc
Confidence            9999999999999876543

>KOG0266|consensus

Probab=100.00  E-value=5.8e-33  Score=266.38  Aligned_cols=282  Identities=33%  Similarity=0.586  Sum_probs=244.9

Q ss_pred             hhhcccccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182          97 TYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus        97 ~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..+...+...+.++.|+++|+++++++.|+.+++|+..+++  .++.+.+|...|..++|+                   
T Consensus       152 ~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs-------------------  212 (456)
T KOG0266|consen  152 QTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFS-------------------  212 (456)
T ss_pred             eeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEEC-------------------
Confidence            33445557888999999999999999999999999998888  788888999888888874                   


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                                                                                         ++++++++++.|+
T Consensus       213 -------------------------------------------------------------------~d~~~l~s~s~D~  225 (456)
T KOG0266|consen  213 -------------------------------------------------------------------PDGSYLLSGSDDK  225 (456)
T ss_pred             -------------------------------------------------------------------CCCcEEEEecCCc
Confidence                                                                               4666788999999


Q ss_pred             eEEEEEC-CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEE
Q psy9182         255 TIKVWDR-VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVT  329 (486)
Q Consensus       255 ~i~i~d~-~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~  329 (486)
                      +|+|||+ ..+..++++++|...|++++|  +++++++|+.|++|++||+++++++..+..|...|.+++|+++  .+++
T Consensus       226 tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s  305 (456)
T KOG0266|consen  226 TLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVS  305 (456)
T ss_pred             eEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEE
Confidence            9999999 556899999999999999999  6799999999999999999999999999999999999999864  8999


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcc--cEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRA--AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      ++.|+.|++||+.++... ....+.++..  .+.++.|  ++.++++++.|+.+++||+..+..+..+.+|...+.|+..
T Consensus       306 ~s~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~  384 (456)
T KOG0266|consen  306 ASYDGTIRVWDLETGSKL-CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFS  384 (456)
T ss_pred             cCCCccEEEEECCCCcee-eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEec
Confidence            999999999999998743 2233334433  4888888  8999999999999999999999999999999887544421


Q ss_pred             -----CCCEEEEEeCCCcEEEEECCCCeeeEEecCc-ccCeEEEEe--cCCEEEEEe--CCCcEEEEeCC
Q psy9182         406 -----RDRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRF--DAKRIVSGA--YDGKIKVWNLV  465 (486)
Q Consensus       406 -----~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~--~~~~l~s~~--~dg~v~iwdl~  465 (486)
                           .+.++++|+.|+.|++||+.++..+..+.+| ...+..+++  ..+++++++  .|+.+++|..+
T Consensus       385 ~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  385 PTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             ccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence                 4899999999999999999999999999999 888888888  778888888  79999999864

>KOG0284|consensus

Probab=100.00  E-value=9.2e-35  Score=250.97  Aligned_cols=274  Identities=20%  Similarity=0.427  Sum_probs=233.8

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      .+-.|..+.+.|+|+.|++|+..|.+.+|+..+......+++|..+|+++.|+               .           
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws---------------~-----------  148 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWS---------------H-----------  148 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEc---------------c-----------
Confidence            34467778889999999999999999999997766666778999999999885               2           


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                  ++..+++|..+|.|++|+..
T Consensus       149 ------------------------------------------------------------~g~wmiSgD~gG~iKyWqpn  168 (464)
T KOG0284|consen  149 ------------------------------------------------------------NGTWMISGDKGGMIKYWQPN  168 (464)
T ss_pred             ------------------------------------------------------------CCCEEEEcCCCceEEecccc
Confidence                                                                        44455556666666666543


Q ss_pred             CceeeEEEcCCc-ccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEE
Q psy9182         263 SLQCIKVLTGHT-GSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIA  337 (486)
Q Consensus       263 ~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~  337 (486)
                      - ..++.+++|. ..|.+++|  +...+++++.||+|+|||....+....+.+|.-.|.++.|+|  +++++|+.|..|+
T Consensus       169 m-nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVK  247 (464)
T KOG0284|consen  169 M-NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVK  247 (464)
T ss_pred             h-hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeE
Confidence            2 2234444444 88999998  678899999999999999999998889999999999999997  4999999999999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVS  412 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~  412 (486)
                      +||.+++.++   ..+.+|...|..+.|  ++++|++++.|..++++|+++.+.+..+++|...++++.|+   ..+|.+
T Consensus       248 lWDprSg~cl---~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lfts  324 (464)
T KOG0284|consen  248 LWDPRSGSCL---ATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTS  324 (464)
T ss_pred             eecCCCcchh---hhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceee
Confidence            9999999876   566789999999999  78999999999999999999999999999999999999985   789999


Q ss_pred             EeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         413 GSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       413 ~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      |+.||.|..|.+...+++..+ .+|...|++++|  -|..|++|+.|.++++|.-.-
T Consensus       325 gg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~r  381 (464)
T KOG0284|consen  325 GGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNR  381 (464)
T ss_pred             ccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCC
Confidence            999999999999866666555 579999999999  788999999999999998543

>KOG0306|consensus

Probab=100.00  E-value=3.9e-32  Score=251.67  Aligned_cols=359  Identities=23%  Similarity=0.402  Sum_probs=272.2

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccC----------
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD----------  172 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~----------  172 (486)
                      ..++|+..+++..+||.|-.||+|+||+..++....++.||+..|+++.|+  |..+++|+.|+.|.+||          
T Consensus        66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL  145 (888)
T KOG0306|consen   66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRL  145 (888)
T ss_pred             ceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEe
Confidence            468888999999999999999999999999999999999999999999996  78999999999998865          


Q ss_pred             ---------------cceeecCCCCCcceeeecccccccccCCCCC----------------------------------
Q psy9182         173 ---------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGG----------------------------------  203 (486)
Q Consensus       173 ---------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~----------------------------------  203 (486)
                                     ...+++.+.|+.|++||+++..+........                                  
T Consensus       146 ~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~  225 (888)
T KOG0306|consen  146 RGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEK  225 (888)
T ss_pred             ecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccc
Confidence                           4568888889999999875532111000000                                  


Q ss_pred             -------------------CCC-----CCC--------------------------------------Cc------cc--
Q psy9182         204 -------------------GGP-----PPS--------------------------------------GP------SI--  213 (486)
Q Consensus       204 -------------------~~~-----~~~--------------------------------------~~------~~--  213 (486)
                                         +..     ...                                      ..      .+  
T Consensus       226 ~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~  305 (888)
T KOG0306|consen  226 ETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEK  305 (888)
T ss_pred             cccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhh
Confidence                               000     000                                      00      00  


Q ss_pred             -------------------ccccccCceeE-------------EEEe---------------ccCCCccceEEEEeCC-C
Q psy9182         214 -------------------ENNWRMGKFLL-------------QRIN---------------CRSENSKGVYCLQYDD-H  245 (486)
Q Consensus       214 -------------------~~~~~~~~~~~-------------~~~~---------------~~~~~~~~v~~~~~~~-~  245 (486)
                                         ...|..+....             -.+.               ...+|...+..+.... +
T Consensus       306 sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~  385 (888)
T KOG0306|consen  306 SLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDS  385 (888)
T ss_pred             hHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCc
Confidence                               00000000000             0000               0112334444444422 2


Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~  323 (486)
                      .++..+..+.+++|+..+.++++++...  .+.+..|  .++++++|...|.+.+||+.+...+.++..|.+.+.+++..
T Consensus       386 ~~~~Sga~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~  463 (888)
T KOG0306|consen  386 ILLASGAGESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLS  463 (888)
T ss_pred             eeeeecCCCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeec
Confidence            3333345678999999999999999754  6666666  77899999999999999999999999999999999999998


Q ss_pred             CC--eEEEEeCCCcEEEEECCCCCc--------eeeE-EeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         324 NG--MMVTCSKDRSIAVWDMVSPNE--------ITLR-RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       324 ~~--~l~~~~~dg~i~i~d~~~~~~--------~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      |+  .+++|+.|.+|++||..--..        +... .....-...|.|+.+  |+++|+++--|.++++|-+++.+..
T Consensus       464 pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFf  543 (888)
T KOG0306|consen  464 PDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFF  543 (888)
T ss_pred             CCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeee
Confidence            65  899999999999999742111        0000 011123456777776  7999999999999999999999999


Q ss_pred             EEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         391 RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       391 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      -.+.+|.-+|.|+..  +++++++|+.|.+|+||-++=|.|-..+.+|.+.|.++.|  ....+.++|.|+.|+-||-.
T Consensus       544 lsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~  622 (888)
T KOG0306|consen  544 LSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGE  622 (888)
T ss_pred             eeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechh
Confidence            999999999999876  6899999999999999999999999999999999999999  66779999999999999976

>KOG0313|consensus

Probab=100.00  E-value=7.5e-33  Score=237.15  Aligned_cols=285  Identities=26%  Similarity=0.476  Sum_probs=231.4

Q ss_pred             hcccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182          99 LKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      +.++.+.|.++-.--. +++|++|+.||.++|||.. |+...++.||.++|..+++.-.      +      .....|++
T Consensus        99 l~~~~hdDWVSsv~~~-~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~------n------~~~~~fvs  164 (423)
T KOG0313|consen   99 LQCFLHDDWVSSVKGA-SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIK------N------SSSCLFVS  164 (423)
T ss_pred             cccccchhhhhhhccc-CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEec------C------CccceEEE
Confidence            3344444444333222 7899999999999999987 8999999999999998888410      0      22336999


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEE--eCCCEEEEEecCCeE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQ--YDDHKIVSGLRDNTI  256 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i  256 (486)
                      ++.|.++++|.++.+....                           ..+....+|...+.+++  .++..+++|+.|..|
T Consensus       165 as~Dqtl~Lw~~~~~~~~~---------------------------~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~l  217 (423)
T KOG0313|consen  165 ASMDQTLRLWKWNVGENKV---------------------------KALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTML  217 (423)
T ss_pred             ecCCceEEEEEecCchhhh---------------------------hHHhHhcccccceeEEEecCCCCeEEeeccccee
Confidence            9999999999986544221                           11222235666666665  588999999999999


Q ss_pred             EEEECC-------------------------CceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         257 KVWDRV-------------------------SLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       257 ~i~d~~-------------------------~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                      .||+..                         ++.++..+.+|.++|.++.| +...+++++.|.+|+.||+.++..+.++
T Consensus       218 kiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~  297 (423)
T KOG0313|consen  218 KIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTL  297 (423)
T ss_pred             eecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeee
Confidence            999821                         12345677899999999999 7789999999999999999999998887


Q ss_pred             cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECC
Q psy9182         311 IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       311 ~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~  385 (486)
                      .. .....++.+.+  +++++|+.|..+++||.+++........+.+|...|.++.|   +...|++++.|+++++||++
T Consensus       298 ~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR  376 (423)
T KOG0313|consen  298 TT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR  376 (423)
T ss_pred             ec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEec
Confidence            66 56688888876  49999999999999999998877777889999999999999   66789999999999999999


Q ss_pred             Cce-EEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECC
Q psy9182         386 SCE-FVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       386 ~~~-~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~  425 (486)
                      +.+ ++..+.+|...|.++.|. +.++++|+.|.+|+|+.-.
T Consensus       377 S~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  377 STKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             cCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence            987 899999999999999997 6699999999999998743

>KOG0291|consensus

Probab=100.00  E-value=8.6e-32  Score=249.56  Aligned_cols=327  Identities=20%  Similarity=0.376  Sum_probs=255.3

Q ss_pred             hhhcccccccccccCCccCcceEEEeecCceeeeccccc-----------------------ccc-----------eeee
Q psy9182          97 TYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS-----------------------CEF-----------VRTL  142 (486)
Q Consensus        97 ~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~-----------------------~~~-----------~~~l  142 (486)
                      .+.-..|+..|.++.|..+...+.|-+.||.+.+|....                       ++.           ..-+
T Consensus       182 ~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~l  261 (893)
T KOG0291|consen  182 TYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYL  261 (893)
T ss_pred             eEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeee
Confidence            445577889999999999999999999999999997651                       111           0001


Q ss_pred             cCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCce
Q psy9182         143 NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKF  222 (486)
Q Consensus       143 ~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (486)
                      ......|++.+|+               +....|+++-..|...++.+.....                           
T Consensus       262 n~~~~kvtaa~fH---------------~~t~~lvvgFssG~f~LyelP~f~l---------------------------  299 (893)
T KOG0291|consen  262 NQNSSKVTAAAFH---------------KGTNLLVVGFSSGEFGLYELPDFNL---------------------------  299 (893)
T ss_pred             cccccceeeeecc---------------CCceEEEEEecCCeeEEEecCCceE---------------------------
Confidence            1122445555555               2345588888888888988743221                           


Q ss_pred             eEEEEeccCCCccceEEEEeCCCEEEEEecC-CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182         223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRD-NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVW  299 (486)
Q Consensus       223 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vw  299 (486)
                       +..+. ...+.....++...|..++.|+.. |.+.||+..+...+...++|...+.++++  ||+++++|+.||.|+||
T Consensus       300 -ih~LS-is~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvW  377 (893)
T KOG0291|consen  300 -IHSLS-ISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVW  377 (893)
T ss_pred             -EEEee-cccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEE
Confidence             11111 112233333444459999998765 89999999999999999999999999988  88999999999999999


Q ss_pred             ECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182         300 DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG  375 (486)
Q Consensus       300 d~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  375 (486)
                      |..++-|..++..|+..|+.+.|.  ++.+++.+-||+|+.||+...........  ..+....+++.  .|..+.+|+.
T Consensus       378 n~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~--P~p~QfscvavD~sGelV~AG~~  455 (893)
T KOG0291|consen  378 NTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTS--PEPIQFSCVAVDPSGELVCAGAQ  455 (893)
T ss_pred             eccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecC--CCceeeeEEEEcCCCCEEEeecc
Confidence            999999999999999999999997  56899999999999999988776644333  33444455555  5889999887


Q ss_pred             CC-cEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe-eeEEecCcccCeEEEEe--cCCE
Q psy9182         376 DR-TIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DAKR  449 (486)
Q Consensus       376 d~-~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~--~~~~  449 (486)
                      |. .|.+|++++|+++..+.+|.++|.++++  ++..|++|+.|.+|++||+-... .+.++. +...+.+++|  ||+.
T Consensus       456 d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~e  534 (893)
T KOG0291|consen  456 DSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKE  534 (893)
T ss_pred             ceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCe
Confidence            76 5999999999999999999999998666  58999999999999999985442 334443 5667899999  8999


Q ss_pred             EEEEeCCCcEEEEeCCCCCCC
Q psy9182         450 IVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       450 l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      |+++.-||.|.+||...+.+.
T Consensus       535 laVaTldgqItf~d~~~~~q~  555 (893)
T KOG0291|consen  535 LAVATLDGQITFFDIKEAVQV  555 (893)
T ss_pred             EEEEEecceEEEEEhhhceee
Confidence            999999999999998876543

>KOG0645|consensus

Probab=100.00  E-value=1.7e-31  Score=218.98  Aligned_cols=285  Identities=22%  Similarity=0.445  Sum_probs=230.8

Q ss_pred             ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccc
Q psy9182         138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW  217 (486)
Q Consensus       138 ~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (486)
                      .++.+++|.+.+..++|++.              .|..|++++.|+.|++|+...+..                     |
T Consensus         6 ~~~~~~gh~~r~W~~awhp~--------------~g~ilAscg~Dk~vriw~~~~~~s---------------------~   50 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPG--------------KGVILASCGTDKAVRIWSTSSGDS---------------------W   50 (312)
T ss_pred             eEEeecCCCCcEEEEEeccC--------------CceEEEeecCCceEEEEecCCCCc---------------------E
Confidence            46788999999999999852              145699999999999999742110                     0


Q ss_pred             ccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC--ceeeEEEcCCcccEEEEEe--cCCEEEEEeCC
Q psy9182         218 RMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS--LQCIKVLTGHTGSVLCLQY--DERVIISGSSD  293 (486)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d  293 (486)
                      .    ....+...+.....-++++|.|++|++|+.|.++.||.-..  .+++..+.||...|.|++|  +|++||+++.|
T Consensus        51 ~----ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD  126 (312)
T KOG0645|consen   51 T----CKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD  126 (312)
T ss_pred             E----EEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence            0    11111112233444567788999999999999999997553  4778999999999999999  89999999999


Q ss_pred             CcEEEEECCCC---cEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C
Q psy9182         294 STVRVWDVNTG---EMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D  366 (486)
Q Consensus       294 g~i~vwd~~~~---~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~  366 (486)
                      ..|-||.+..+   ++...++.|...|..+.|+|  ++|++++.|++|++|+-..+........+.+|...|.++.|  .
T Consensus       127 KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~  206 (312)
T KOG0645|consen  127 KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI  206 (312)
T ss_pred             CeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC
Confidence            99999998744   56778899999999999998  79999999999999998766666777889999999999999  5


Q ss_pred             CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCC------eee-EEecCcccC
Q psy9182         367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG------ACL-RVLEGHEEL  439 (486)
Q Consensus       367 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~------~~~-~~~~~h~~~  439 (486)
                      |..|++++.|++++||-..+.    .-..|...+..++|....|++++.|+.|++|.-...      +.+ ..-..|...
T Consensus       207 G~rl~s~sdD~tv~Iw~~~~~----~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~d  282 (312)
T KOG0645|consen  207 GSRLVSCSDDGTVSIWRLYTD----LSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVD  282 (312)
T ss_pred             CceEEEecCCcceEeeeeccC----cchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccc
Confidence            789999999999999986521    112477888999999889999999999999986542      111 133568889


Q ss_pred             eEEEEec---CCEEEEEeCCCcEEEEeCC
Q psy9182         440 VRCIRFD---AKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       440 v~~~~~~---~~~l~s~~~dg~v~iwdl~  465 (486)
                      |+++.|+   +++|++++.||.|++|.+.
T Consensus       283 VNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  283 VNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             cceEEEcCCCCCceeecCCCceEEEEEec
Confidence            9999993   5789999999999999975

>KOG0318|consensus

Probab=100.00  E-value=2.8e-31  Score=236.63  Aligned_cols=333  Identities=18%  Similarity=0.305  Sum_probs=249.9

Q ss_pred             ccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEee--cceeEecCCCCc----eecc---
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYR--DRLVVSGSSDNT----IRYR---  171 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~----i~~~---  171 (486)
                      |...++-..++|.|.|+|+|...|.|||||....+  +..+++.-.++|..++|+  ++.++..+..+.    +..|   
T Consensus        58 H~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG  137 (603)
T KOG0318|consen   58 HAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSG  137 (603)
T ss_pred             ccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCC
Confidence            33445666788999999999999999999987533  334566677899999996  333433322211    1111   


Q ss_pred             ---------------------CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc
Q psy9182         172 ---------------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR  230 (486)
Q Consensus       172 ---------------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (486)
                                           ...++++++.|++|.+++=                             ..++...  ..
T Consensus       138 ~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeG-----------------------------PPFKFk~--s~  186 (603)
T KOG0318|consen  138 NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEG-----------------------------PPFKFKS--SF  186 (603)
T ss_pred             CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeC-----------------------------CCeeeee--cc
Confidence                                 1345777777777777651                             1111111  12


Q ss_pred             CCCcc--ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc---CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC
Q psy9182         231 SENSK--GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT---GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       231 ~~~~~--~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      ..|..  ..+.++|||.++++.+.||++.+||-.+++.+..+.   +|.+.|.+++|  |+..+++++.|.+++|||+.+
T Consensus       187 r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~  266 (603)
T KOG0318|consen  187 REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVST  266 (603)
T ss_pred             cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeec
Confidence            23333  345577899999999999999999999999999998   89999999999  889999999999999999999


Q ss_pred             CcEEEEecccC---ccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182         304 GEMVNTLIHHC---EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT  378 (486)
Q Consensus       304 ~~~~~~~~~~~---~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~  378 (486)
                      .+++.++....   .....+.|.++.|++.+.+|.|.+++.......   ....+|...|+++..  ++.+|++|+.||.
T Consensus       267 ~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~---~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~  343 (603)
T KOG0318|consen  267 NSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVL---KVISGHNKSITALTVSPDGKTIYSGSYDGH  343 (603)
T ss_pred             cceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChh---heecccccceeEEEEcCCCCEEEeeccCce
Confidence            99999885533   334455667899999999999999999888733   677899999999988  7899999999999


Q ss_pred             EEEEECCCceEE-----------EEEcCCc-c------------------------------------------------
Q psy9182         379 IKVWNTSSCEFV-----------RTLNGHK-R------------------------------------------------  398 (486)
Q Consensus       379 i~iwd~~~~~~~-----------~~~~~~~-~------------------------------------------------  398 (486)
                      |.-||..++..-           ..+..+. +                                                
T Consensus       344 I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~  423 (603)
T KOG0318|consen  344 INSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVA  423 (603)
T ss_pred             EEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEE
Confidence            999997654211           1110000 0                                                


Q ss_pred             -----------------------cEEEEEeCCCEEEEEeCCCcEEEEECCCCee--eEEecCcccCeEEEEe--cCCEEE
Q psy9182         399 -----------------------GIACLQYRDRLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRF--DAKRIV  451 (486)
Q Consensus       399 -----------------------~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~h~~~v~~~~~--~~~~l~  451 (486)
                                             ...++..++..++.|+.||.|+||.+..++.  ...+..|.++|+++++  |+.+|+
T Consensus       424 ~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla  503 (603)
T KOG0318|consen  424 CISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLA  503 (603)
T ss_pred             ecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEE
Confidence                                   0012233578899999999999999986553  3456789999999999  999999


Q ss_pred             EEeCCCcEEEEeCCCCCC
Q psy9182         452 SGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       452 s~~~dg~v~iwdl~~~~~  469 (486)
                      ++...+.+.+||+.+...
T Consensus       504 ~~Da~rkvv~yd~~s~~~  521 (603)
T KOG0318|consen  504 AGDASRKVVLYDVASREV  521 (603)
T ss_pred             EeccCCcEEEEEcccCce
Confidence            999999999999987654

>KOG0293|consensus

Probab=100.00  E-value=3.5e-33  Score=241.52  Aligned_cols=277  Identities=23%  Similarity=0.432  Sum_probs=217.9

Q ss_pred             hcccccccccccCCccCcceEEEeecCceeeecccccc---cceeeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182          99 LKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~---~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      +-..|...|.-+.||++|+|||+++.|.+..||++..-   ++.+++.+|..+|..+.|+               ||+.+
T Consensus       219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wS---------------PDdry  283 (519)
T KOG0293|consen  219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWS---------------PDDRY  283 (519)
T ss_pred             hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEEC---------------CCCCe
Confidence            44567788899999999999999999999999997643   4578899999999988886               34444


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                                                                                             +++++.+..
T Consensus       284 -----------------------------------------------------------------------LlaCg~~e~  292 (519)
T KOG0293|consen  284 -----------------------------------------------------------------------LLACGFDEV  292 (519)
T ss_pred             -----------------------------------------------------------------------EEecCchHh
Confidence                                                                                   444444445


Q ss_pred             EEEEECCCceeeEEEc-CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc-cCccEEEEEEc--CCeEEE
Q psy9182         256 IKVWDRVSLQCIKVLT-GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFS--NGMMVT  329 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~  329 (486)
                      +.+||+.+|.....+. ++...+.+.+|  ||..+++|+.|+++..||+. |......++ ....|.+++..  +..+++
T Consensus       293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~  371 (519)
T KOG0293|consen  293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLL  371 (519)
T ss_pred             eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEE
Confidence            5555555555554443 23456677777  89999999999999999986 444444443 23557788775  448888


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE--Ee
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL--QY  405 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~--~~  405 (486)
                      .+.|..|++|+.++.....    ......+++++..  +++++++.-.+..+++||++..+.+..+.+|...-.-+  +|
T Consensus       372 v~~d~~i~l~~~e~~~dr~----lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCF  447 (519)
T KOG0293|consen  372 VTVDKKIRLYNREARVDRG----LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCF  447 (519)
T ss_pred             Eecccceeeechhhhhhhc----cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEecc
Confidence            8899999999987765432    2234566777777  88899999999999999999999999999998653322  33


Q ss_pred             ---CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCC
Q psy9182         406 ---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       406 ---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~  466 (486)
                         +..++++|++|+.|+||+..+|+++..+.||...|++++|   ++.++|+||.||+||||....
T Consensus       448 gg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  448 GGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             CCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence               3589999999999999999999999999999999999999   778899999999999998763

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=4.4e-31  Score=272.45  Aligned_cols=300  Identities=19%  Similarity=0.339  Sum_probs=235.7

Q ss_pred             Cceeeecccccccceee-----ecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccC
Q psy9182         125 DRTIKVWNTSSCEFVRT-----LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQ  199 (486)
Q Consensus       125 dg~v~iWd~~~~~~~~~-----l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~  199 (486)
                      +|.+++|+..+.+....     +..|.+.|.+++|+               +++.++++++.|+.|++|++.........
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs---------------~dg~~latgg~D~~I~iwd~~~~~~~~~~  521 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFD---------------RDGEFFATAGVNKKIKIFECESIIKDGRD  521 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEEC---------------CCCCEEEEEeCCCEEEEEECCcccccccc
Confidence            67899999886655433     34589999999998               67888999999999999997432110000


Q ss_pred             CCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEE
Q psy9182         200 GGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL  278 (486)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~  278 (486)
                                          .......+.  .......+++.+ ++.++++++.||.|++||+.+++.+..+.+|...|.
T Consensus       522 --------------------~~~~~~~~~--~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~  579 (793)
T PLN00181        522 --------------------IHYPVVELA--SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVW  579 (793)
T ss_pred             --------------------cccceEEec--ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEE
Confidence                                000000011  111222334433 578999999999999999999999999999999999


Q ss_pred             EEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc---CCeEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         279 CLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       279 ~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                      +++|   ++.+|++|+.||.|++||++++..+..+..+ ..+.++.|.   +..+++|+.||.|++||+++....  ...
T Consensus       580 ~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~--~~~  656 (793)
T PLN00181        580 SIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLP--LCT  656 (793)
T ss_pred             EEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCcc--ceE
Confidence            9999   4679999999999999999999988888754 578888884   348999999999999999876532  244


Q ss_pred             eecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCC------ceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEE
Q psy9182         353 LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSS------CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD  423 (486)
Q Consensus       353 ~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd  423 (486)
                      ..+|...|.++.| ++.++++++.|+.|++||+..      .+++..+.+|...+.++.+  ++.+|++|+.|+.|++|+
T Consensus       657 ~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~  736 (793)
T PLN00181        657 MIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH  736 (793)
T ss_pred             ecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence            5689999999999 789999999999999999974      3578889999998877777  488999999999999999


Q ss_pred             CCCCeeeEEe-------------cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         424 IECGACLRVL-------------EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       424 ~~~~~~~~~~-------------~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      .....++..+             ..|...|.+++|  ++..|++|+.||.|++|++
T Consensus       737 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        737 KAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             CCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence            8765443222             234567999999  7889999999999999997

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=3.8e-31  Score=241.80  Aligned_cols=273  Identities=37%  Similarity=0.679  Sum_probs=233.0

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...+.++.++|++++|++++.||.|++||+.+++....+..|...+..+.|.                          
T Consensus         7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~--------------------------   60 (289)
T cd00200           7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS--------------------------   60 (289)
T ss_pred             ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEEC--------------------------
Confidence            466789999999999999999999999999999988888888887777666663                          


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                  ++++.+++++.+|.|++||+
T Consensus        61 ------------------------------------------------------------~~~~~l~~~~~~~~i~i~~~   80 (289)
T cd00200          61 ------------------------------------------------------------ADGTYLASGSSDKTIRLWDL   80 (289)
T ss_pred             ------------------------------------------------------------CCCCEEEEEcCCCeEEEEEc
Confidence                                                                        24456777777888888888


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEE
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIA  337 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~  337 (486)
                      .+++....+..|...+.++.+  +++++++++.+|.+.+||+++++....+..|...+.++.+++  .++++++.++.|+
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~  160 (289)
T cd00200          81 ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK  160 (289)
T ss_pred             CcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEE
Confidence            877777888888889999999  447788777799999999999999888888888999999987  3666666699999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSG  413 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  413 (486)
                      +||++.++..   ..+..|...+.++.+  +++.+++++.++.|++||+++++.+..+..|...+.++.++  +.+++++
T Consensus       161 i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  237 (289)
T cd00200         161 LWDLRTGKCV---ATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG  237 (289)
T ss_pred             EEEccccccc---eeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEE
Confidence            9999876654   344477778999988  56689999999999999999999999998899999999986  5777777


Q ss_pred             eCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       414 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +.||.|++||+.+++.+..+..|...|.+++|  ++++|++++.||.|++|+
T Consensus       238 ~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         238 SEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             cCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            77999999999999999999999999999999  568999999999999996

>KOG0274|consensus

Probab=100.00  E-value=3.2e-32  Score=259.99  Aligned_cols=234  Identities=35%  Similarity=0.600  Sum_probs=220.8

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEE-EcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      +...+++..+.+.++++++.+++|++||..++..+.. +.+|.+.|.++.+.  +..+++|+.|.++++||..+|++...
T Consensus       207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~  286 (537)
T KOG0274|consen  207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHS  286 (537)
T ss_pred             CcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEE
Confidence            4556777788899999999999999999999999988 99999999999996  89999999999999999999999999


Q ss_pred             ecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceE
Q psy9182         310 LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      +.+|.+.+.++...+..+++|+.|.+|++|++.++..+   ..+.+|..+|.++..++.++++|+.|++|++||+.++++
T Consensus       287 l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l---~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~~~c  363 (537)
T KOG0274|consen  287 LQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACL---NLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRTGKC  363 (537)
T ss_pred             ecCCCceEEEEEccCceEeeccCCceEEEEeccCcceE---EEeccccccEEEEEecCCEEEEEecCceEEEEEhhhcee
Confidence            99999999999999999999999999999999988765   555569999999999999999999999999999999999


Q ss_pred             EEEEcCCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCC-eeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         390 VRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       390 ~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++.+.+|...|.++.+++ ..+++|+.|++|++||+++. +++..+.+|.+.+..+.+.+++|++++.||+|++||..++
T Consensus       364 l~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~~~  443 (537)
T KOG0274|consen  364 LKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAEEG  443 (537)
T ss_pred             eeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccceeEeccccccEEEeecccC
Confidence            999999999999999998 99999999999999999999 9999999999999999999999999999999999999865


Q ss_pred             CC
Q psy9182         468 LD  469 (486)
Q Consensus       468 ~~  469 (486)
                      ..
T Consensus       444 ~~  445 (537)
T KOG0274|consen  444 EC  445 (537)
T ss_pred             ce
Confidence            44

>KOG0263|consensus

Probab=100.00  E-value=3.2e-32  Score=254.47  Aligned_cols=263  Identities=23%  Similarity=0.449  Sum_probs=216.1

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      ...+.|..|++|+.+||.|..|-.|++|.+...+ ++.+++-.. +.                        .+=+.+.|-
T Consensus       378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~k-l~~lk~~~~-l~------------------------~~d~~sad~  431 (707)
T KOG0263|consen  378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKK-LKKLKDASD-LS------------------------NIDTESADV  431 (707)
T ss_pred             CCcceeEeecCCcchhhccccccEEEEEecchhh-hccccchhh-hc------------------------cccccccch
Confidence            3567899999999999999999999999998643 334432211 10                        011122222


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      .+.+-|-+...                            ....   ..+|..+|  ..++|+.++|++++.|+++++|.+
T Consensus       432 ~~~~~D~~~~~----------------------------~~~~---L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl  480 (707)
T KOG0263|consen  432 DVDMLDDDSSG----------------------------TSRT---LYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSL  480 (707)
T ss_pred             hhhhccccCCc----------------------------eeEE---eecCCCceeeeeecccccceeeccCCcceeeeec
Confidence            22233321110                            0111   12344444  457789999999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEE
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIA  337 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~  337 (486)
                      .+..++..+++|..+|.++.|  .|-++++++.|++-++|......+++.+.+|.+.|.|+.|+|+  ++++|+.|.+|+
T Consensus       481 ~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVR  560 (707)
T KOG0263|consen  481 DTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVR  560 (707)
T ss_pred             ccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEE
Confidence            999999999999999999988  6889999999999999999999999999999999999999986  999999999999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSG  413 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  413 (486)
                      +||+.++..+   +.+.||..+|.++++  +|++|++|+.||.|.+||+.+++++..+.+|.+.|.+++|  +|..||+|
T Consensus       561 lWDv~~G~~V---RiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasg  637 (707)
T KOG0263|consen  561 LWDVSTGNSV---RIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASG  637 (707)
T ss_pred             EEEcCCCcEE---EEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEec
Confidence            9999999765   677899999999999  8999999999999999999999999999999999999988  59999999


Q ss_pred             eCCCcEEEEECCC
Q psy9182         414 SSDNTIRLWDIEC  426 (486)
Q Consensus       414 ~~dg~v~iwd~~~  426 (486)
                      +.|++|++||+..
T Consensus       638 g~DnsV~lWD~~~  650 (707)
T KOG0263|consen  638 GADNSVRLWDLTK  650 (707)
T ss_pred             CCCCeEEEEEchh
Confidence            9999999999853

>KOG0282|consensus

Probab=100.00  E-value=1.2e-33  Score=249.30  Aligned_cols=281  Identities=21%  Similarity=0.352  Sum_probs=233.5

Q ss_pred             hhcccccccccccCCcc-CcceEEEeecCceeeeccccc-ccceeeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182          98 YLKPMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus        98 ~~~~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~-~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      +.-+.|...+.++.+.| .+.+|++|+.|+.|+||++-. +++++++.+|..+|..++|+               .++..
T Consensus       208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s---------------~~g~~  272 (503)
T KOG0282|consen  208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFN---------------NCGTS  272 (503)
T ss_pred             eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhcc---------------ccCCe
Confidence            33467788899999988 899999999999999999876 89999999999999999998               57888


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC-CEEEEEecCC
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD-HKIVSGLRDN  254 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg  254 (486)
                      +++++.|+.+++||++++......                              ..+....++.+.|++ +.+++|+.|+
T Consensus       273 fLS~sfD~~lKlwDtETG~~~~~f------------------------------~~~~~~~cvkf~pd~~n~fl~G~sd~  322 (503)
T KOG0282|consen  273 FLSASFDRFLKLWDTETGQVLSRF------------------------------HLDKVPTCVKFHPDNQNIFLVGGSDK  322 (503)
T ss_pred             eeeeecceeeeeeccccceEEEEE------------------------------ecCCCceeeecCCCCCcEEEEecCCC
Confidence            999999999999999887654322                              123455566677777 8899999999


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec---ccCccEEEEEEcCCeEEE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI---HHCEAVLHLRFSNGMMVT  329 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~i~~~~~~~~~l~~  329 (486)
                      .|+.||+++++.++.+..|-+.|..+.|  ++..+++.+.|+.++||+.+.+-.+..+.   .|.-+...+..+++.+++
T Consensus       323 ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a  402 (503)
T KOG0282|consen  323 KIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA  402 (503)
T ss_pred             cEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh
Confidence            9999999999999999999999999999  78999999999999999999887665442   334444444444568999


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEE--Ee--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~--~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      -+.|+.|.+|.+...-.......+.+|...-.++  .|  ||++|++|+.||.+.+||.++-+++..+++|...+..+.|
T Consensus       403 Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~w  482 (503)
T KOG0282|consen  403 QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDW  482 (503)
T ss_pred             hccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEe
Confidence            9999999999976655554556667776544433  33  8999999999999999999999999999999999999999


Q ss_pred             C---CCEEEEEeCCCcEEEEE
Q psy9182         406 R---DRLVVSGSSDNTIRLWD  423 (486)
Q Consensus       406 ~---~~~l~~~~~dg~v~iwd  423 (486)
                      +   ...+|+++.||.|++||
T Consensus       483 HP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  483 HPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             cCCCcceeEecccCceeEecC
Confidence            6   56799999999999996

>KOG0279|consensus

Probab=100.00  E-value=2.8e-31  Score=218.68  Aligned_cols=275  Identities=27%  Similarity=0.447  Sum_probs=218.6

Q ss_pred             ccccccccccCCccC-cceEEEeecCceeeecccc-----cccceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFD-EKYIVSASGDRTIKVWNTS-----SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~-----~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      +.|...|+.++..+. .+.+++++.|.++.+|++.     .|..++.|.||...|..+..+               +|++
T Consensus        12 ~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s---------------~dg~   76 (315)
T KOG0279|consen   12 EGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLS---------------SDGN   76 (315)
T ss_pred             cCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEc---------------cCCc
Confidence            445666766665554 5689999999999999874     467799999999999988876               7899


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEec
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLR  252 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~  252 (486)
                      +.++++.|+++++||+.++...                            +++   .+|...+  +++++|...+++|+.
T Consensus        77 ~alS~swD~~lrlWDl~~g~~t----------------------------~~f---~GH~~dVlsva~s~dn~qivSGSr  125 (315)
T KOG0279|consen   77 FALSASWDGTLRLWDLATGEST----------------------------RRF---VGHTKDVLSVAFSTDNRQIVSGSR  125 (315)
T ss_pred             eEEeccccceEEEEEecCCcEE----------------------------EEE---EecCCceEEEEecCCCceeecCCC
Confidence            9999999999999998664322                            111   1344444  455668899999999


Q ss_pred             CCeEEEEECCCceeeEEEcC-CcccEEEEEec----CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--
Q psy9182         253 DNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYD----ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--  325 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~----~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--  325 (486)
                      |.+|++||+........... +.+.|.|+.|.    ..++++++.|++|++||+++.+....+.+|...++.+.++|+  
T Consensus       126 DkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs  205 (315)
T KOG0279|consen  126 DKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS  205 (315)
T ss_pred             cceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC
Confidence            99999999876554444433 37889999992    568999999999999999999999999999999999999976  


Q ss_pred             eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCceEEEEEcCC--------
Q psy9182         326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGH--------  396 (486)
Q Consensus       326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------  396 (486)
                      ..++|+.||.+.+||++.++...    ..++...|.++.|. .++.+....+..|+|||++++..+..++..        
T Consensus       206 lcasGgkdg~~~LwdL~~~k~ly----sl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~  281 (315)
T KOG0279|consen  206 LCASGGKDGEAMLWDLNEGKNLY----SLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKA  281 (315)
T ss_pred             EEecCCCCceEEEEEccCCceeE----eccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhcccccccccccc
Confidence            88999999999999999988643    33678899999994 445555556677999999999888776521        


Q ss_pred             -cccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         397 -KRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       397 -~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                       ......++|.  |..|++|-.|+.|++|.+.
T Consensus       282 ~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  282 GDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             CCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence             1223455564  9999999999999999875

>KOG0306|consensus

Probab=100.00  E-value=4.8e-31  Score=244.51  Aligned_cols=361  Identities=21%  Similarity=0.382  Sum_probs=281.1

Q ss_pred             cccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccC-------
Q psy9182         100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD-------  172 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~-------  172 (486)
                      -..|+..|+...|..+.++|++.+.|+.|++||+++..+..+.-.|.+.|+.+++.++.+++++.|+.+.+|+       
T Consensus       145 L~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~  224 (888)
T KOG0306|consen  145 LRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDE  224 (888)
T ss_pred             eecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeeccccc
Confidence            3567778888888888899999999999999999999999999999999999999999999988888777632       


Q ss_pred             -------------------------------cceeecCCCCCcceeeeccccc---------------------------
Q psy9182         173 -------------------------------EFQIVSSSHDDTILIWDFLNYS---------------------------  194 (486)
Q Consensus       173 -------------------------------~~~l~s~s~dg~i~vWd~~~~~---------------------------  194 (486)
                                                     +..++.-+.|..+.++.+....                           
T Consensus       225 ~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~  304 (888)
T KOG0306|consen  225 KETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVE  304 (888)
T ss_pred             ccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchh
Confidence                                           2233444444444444431100                           


Q ss_pred             --------------------------------------------------ccccCCCC--C----CCCCC----------
Q psy9182         195 --------------------------------------------------ETPIQGGG--G----GGPPP----------  208 (486)
Q Consensus       195 --------------------------------------------------~~~~~~~~--~----~~~~~----------  208 (486)
                                                                        ....+...  .    .+...          
T Consensus       305 ~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d  384 (888)
T KOG0306|consen  305 KSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSD  384 (888)
T ss_pred             hhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecC
Confidence                                                              00000000  0    00000          


Q ss_pred             ------CCcccccccccC-ceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE
Q psy9182         209 ------SGPSIENNWRMG-KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ  281 (486)
Q Consensus       209 ------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~  281 (486)
                            .+......|... ...++.+.+.   -.-..+|-|.++++++|..+|.+.+||+.+...+.++++|.+.|..++
T Consensus       385 ~~~~~Sga~~SikiWn~~t~kciRTi~~~---y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~  461 (888)
T KOG0306|consen  385 SILLASGAGESIKIWNRDTLKCIRTITCG---YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSIS  461 (888)
T ss_pred             ceeeeecCCCcEEEEEccCcceeEEeccc---cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeee
Confidence                  001112234433 2333333332   333445667899999999999999999999999999999999999988


Q ss_pred             e--cCCEEEEEeCCCcEEEEECCC-----CcEEEEe-------cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCC
Q psy9182         282 Y--DERVIISGSSDSTVRVWDVNT-----GEMVNTL-------IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPN  345 (486)
Q Consensus       282 ~--~~~~l~~~~~dg~i~vwd~~~-----~~~~~~~-------~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~  345 (486)
                      .  |+..+++|+.|.+|++||..-     +...+.+       ..-...|.|+.++|+  +++++--|.+|++|-+.+-+
T Consensus       462 ~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlK  541 (888)
T KOG0306|consen  462 LSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLK  541 (888)
T ss_pred             ecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEeccee
Confidence            7  899999999999999999741     2111111       123567899999975  89999999999999998764


Q ss_pred             ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEE
Q psy9182         346 EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL  421 (486)
Q Consensus       346 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~i  421 (486)
                         ..-.+.||.-+|.|+..  |++.+++|+.|.+|++|-++-|.+-+.+-+|...|.++.|-  ..++++++.|+.|+-
T Consensus       542 ---FflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKq  618 (888)
T KOG0306|consen  542 ---FFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQ  618 (888)
T ss_pred             ---eeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEe
Confidence               44667899999999887  89999999999999999999999999999999999999984  678999999999999


Q ss_pred             EECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         422 WDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       422 wd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ||-..-+.++.+.+|...|++++.  +|.+++++|.|..|++|.-..
T Consensus       619 WDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td  665 (888)
T KOG0306|consen  619 WDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD  665 (888)
T ss_pred             echhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence            999999999999999999999998  899999999999999999654

>KOG0276|consensus

Probab=100.00  E-value=2.9e-31  Score=241.11  Aligned_cols=269  Identities=25%  Similarity=0.448  Sum_probs=235.6

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      +...+-++.++|....++++-.+|.|.|||.++..+++.+.--.-+|++..|-                           
T Consensus        12 rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfi---------------------------   64 (794)
T KOG0276|consen   12 RSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFI---------------------------   64 (794)
T ss_pred             cCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheee---------------------------
Confidence            44567888999999999999999999999999999888887766677666662                           


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                 .-.+.+++|+.|..|+||+..
T Consensus        65 -----------------------------------------------------------aRknWiv~GsDD~~IrVfnyn   85 (794)
T KOG0276|consen   65 -----------------------------------------------------------ARKNWIVTGSDDMQIRVFNYN   85 (794)
T ss_pred             -----------------------------------------------------------eccceEEEecCCceEEEEecc
Confidence                                                                       123568999999999999999


Q ss_pred             CceeeEEEcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC---CeEEEEeCCCcE
Q psy9182         263 SLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSI  336 (486)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i  336 (486)
                      +++.++.|..|...|.|++.+  ..++++++.|-+|++||.+.+ .+.+++.+|...|++++|+|   +.+++++-|++|
T Consensus        86 t~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTV  165 (794)
T KOG0276|consen   86 TGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTV  165 (794)
T ss_pred             cceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccE
Confidence            999999999999999999884  579999999999999999754 67889999999999999986   499999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC--CEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLV  410 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~l  410 (486)
                      ++|.+.++...   ..+.+|...|+++.+    |..+|++|+.|.+|++||..+..+++++++|...|..+.|++  .++
T Consensus       166 KVWslgs~~~n---fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpii  242 (794)
T KOG0276|consen  166 KVWSLGSPHPN---FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPII  242 (794)
T ss_pred             EEEEcCCCCCc---eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEE
Confidence            99999877644   567799999999999    445999999999999999999999999999999999999985  579


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      ++|++||+|+||+..+-++...+.-.-..|++|+-  .++.++.|...|.|.
T Consensus       243 isgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~  294 (794)
T KOG0276|consen  243 ISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVT  294 (794)
T ss_pred             EEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEE
Confidence            99999999999999998888888877889999997  555677776666553

>KOG0315|consensus

Probab=100.00  E-value=9.6e-31  Score=211.99  Aligned_cols=252  Identities=25%  Similarity=0.447  Sum_probs=210.7

Q ss_pred             ccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      +..+...||+++||+|+. ..||++|+.+++  ++.++.+|.+.|+.+.|.               .++..+++|+.||+
T Consensus        43 VNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~---------------~dgrWMyTgseDgt  106 (311)
T KOG0315|consen   43 VNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQ---------------CDGRWMYTGSEDGT  106 (311)
T ss_pred             eeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEe---------------ecCeEEEecCCCce
Confidence            445566889999998875 599999998876  589999999999999997               58888999999999


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  264 (486)
                      ++|||++........                              ....+...++++|+...|++|..+|.|++||+.+.
T Consensus       107 ~kIWdlR~~~~qR~~------------------------------~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~  156 (311)
T KOG0315|consen  107 VKIWDLRSLSCQRNY------------------------------QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGEN  156 (311)
T ss_pred             EEEEeccCcccchhc------------------------------cCCCCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence            999999663322111                              11244555678889999999999999999999988


Q ss_pred             eeeEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC------cEEEEecccCccEEEEEEcCC--eEEEEeCC
Q psy9182         265 QCIKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG------EMVNTLIHHCEAVLHLRFSNG--MMVTCSKD  333 (486)
Q Consensus       265 ~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d  333 (486)
                      .+...+-. ....|.++..  ||.+++++...|..++|++-+.      +++.+++.|...+....++|+  +|++++.|
T Consensus       157 ~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd  236 (311)
T KOG0315|consen  157 SCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD  236 (311)
T ss_pred             ccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCC
Confidence            77765543 3455666655  9999999999999999998654      356678889999999999976  99999999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR  406 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  406 (486)
                      .+++||+.++.  +.....+.+|...+....|  |++||++++.|+.+++||++.++.++...+|.....|+..+
T Consensus       237 ktv~iwn~~~~--~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  237 KTVKIWNTDDF--FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             ceEEEEecCCc--eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence            99999999876  5566788899999999999  89999999999999999999999999999999888887754

>KOG0295|consensus

Probab=100.00  E-value=8.1e-32  Score=229.62  Aligned_cols=228  Identities=31%  Similarity=0.561  Sum_probs=207.9

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC-CcEEEEecccCc
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT-GEMVNTLIHHCE  315 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~  315 (486)
                      -++|+-..+++++.|++|++||..++++...+++|...+..+++  .|+++++++.|=.+.+||..+ .++++.+.+|..
T Consensus       115 ~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h  194 (406)
T KOG0295|consen  115 IFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEH  194 (406)
T ss_pred             eeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCccc
Confidence            35667778889999999999999999999999999999999999  579999999998899999976 567778888999


Q ss_pred             cEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         316 AVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       316 ~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      .|.++.|-  ++++++++.|.+|+.|++.++..+   ..+.+|...|..+..  ||..+++++.|.+|++|-+.++++..
T Consensus       195 ~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv---~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~  271 (406)
T KOG0295|consen  195 GVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCV---KTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKA  271 (406)
T ss_pred             ceeeEEEEecCCeeeecccccceeEEecccceeE---EeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhh
Confidence            99999886  469999999999999999998765   678899999999998  88999999999999999999999999


Q ss_pred             EEcCCcccEEEEEeC------------C-----CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEE
Q psy9182         392 TLNGHKRGIACLQYR------------D-----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVS  452 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~------------~-----~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s  452 (486)
                      .+..|..+|-|++|-            +     .++.+++.|++|++||+.+|.++.++.+|...|..++|  .|+||++
T Consensus       272 ~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~S  351 (406)
T KOG0295|consen  272 ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILS  351 (406)
T ss_pred             hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEE
Confidence            999999999998871            2     58999999999999999999999999999999999999  5999999


Q ss_pred             EeCCCcEEEEeCCCCCC
Q psy9182         453 GAYDGKIKVWNLVAALD  469 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~~~  469 (486)
                      +.+|+++++||+.+.+-
T Consensus       352 caDDktlrvwdl~~~~c  368 (406)
T KOG0295|consen  352 CADDKTLRVWDLKNLQC  368 (406)
T ss_pred             EecCCcEEEEEecccee
Confidence            99999999999997653

>KOG0316|consensus

Probab=100.00  E-value=5.6e-31  Score=211.62  Aligned_cols=231  Identities=26%  Similarity=0.411  Sum_probs=202.8

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE  315 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  315 (486)
                      ..+.-+|++.++++.|.+|++||...+.+++++.+|..+|..++.  |+..+++|+.|..+.+||+.+|+.++.+.+|..
T Consensus        23 vryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~a  102 (307)
T KOG0316|consen   23 VRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLA  102 (307)
T ss_pred             EEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccc
Confidence            334558999999999999999999999999999999999987765  889999999999999999999999999999999


Q ss_pred             cEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         316 AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       316 ~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      .|..+.|+..  .+++|+.|..+++||.++... .+.+.+......|.++...+..+++|+.||+++.||++.|+.....
T Consensus       103 qVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~-ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy  181 (307)
T KOG0316|consen  103 QVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF-EPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDY  181 (307)
T ss_pred             eeeEEEecCcceEEEeccccceeEEEEcccCCC-CccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhh
Confidence            9999999865  899999999999999987653 3456777788899999999999999999999999999999987777


Q ss_pred             cCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe----cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         394 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       394 ~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~----~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      -+|.-...+++.+++..++++.|+++++.|-.+|+.+..+++|...-..+..    ....+++|++||.|.+||+..+..
T Consensus       182 ~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~  261 (307)
T KOG0316|consen  182 FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQ  261 (307)
T ss_pred             cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEecccee
Confidence            6665444444557999999999999999999999999999999875444333    567799999999999999987654

>KOG0282|consensus

Probab=100.00  E-value=5.4e-32  Score=238.94  Aligned_cols=283  Identities=20%  Similarity=0.413  Sum_probs=233.6

Q ss_pred             ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccc
Q psy9182         136 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIEN  215 (486)
Q Consensus       136 ~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (486)
                      .+.+.++.+|...|+++.|.+              ..+.+|++++.|+.|++|++-...                     
T Consensus       204 kk~~~~~~gH~kgvsai~~fp--------------~~~hLlLS~gmD~~vklW~vy~~~---------------------  248 (503)
T KOG0282|consen  204 KKLSHNLSGHTKGVSAIQWFP--------------KKGHLLLSGGMDGLVKLWNVYDDR---------------------  248 (503)
T ss_pred             HhheeeccCCccccchhhhcc--------------ceeeEEEecCCCceEEEEEEecCc---------------------
Confidence            356788999999999999964              256789999999999999984411                     


Q ss_pred             ccccCceeEEEEeccCCCccc--eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cC-CEEEEE
Q psy9182         216 NWRMGKFLLQRINCRSENSKG--VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISG  290 (486)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~  290 (486)
                            ..++.   ..+|...  ..+++.+|..+++++.|+.|++||+++|+++..+.. ...+.|+.+  ++ +.+++|
T Consensus       249 ------~~lrt---f~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G  318 (503)
T KOG0282|consen  249 ------RCLRT---FKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVG  318 (503)
T ss_pred             ------ceehh---hhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEe
Confidence                  11111   1234333  456677899999999999999999999999999863 345688888  44 899999


Q ss_pred             eCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC
Q psy9182         291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK  368 (486)
Q Consensus       291 ~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~  368 (486)
                      +.|+.|+.||+++++.++++..|-+.|..+.|-+  ..+++.+.|+.++||+.+.+-.+........|..+...+.++++
T Consensus       319 ~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~  398 (503)
T KOG0282|consen  319 GSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGK  398 (503)
T ss_pred             cCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCC
Confidence            9999999999999999999999999999999975  49999999999999999988776655555667777777778999


Q ss_pred             EEEEEeCCCcEEEEECCCc---eEEEEEcCCcccE----EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         369 YIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGI----ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v----~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      +++.-+.|+.|.++.+...   .....+++|...=    ..++++|.+|++|+.||.+.+||.++-+.+..+++|..++.
T Consensus       399 ~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci  478 (503)
T KOG0282|consen  399 WFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCI  478 (503)
T ss_pred             eehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceE
Confidence            9999999999999986542   2334667776432    23444799999999999999999999999999999999999


Q ss_pred             EEEe---cCCEEEEEeCCCcEEEEe
Q psy9182         442 CIRF---DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       442 ~~~~---~~~~l~s~~~dg~v~iwd  463 (486)
                      .+.|   ....+|+++.||.|++||
T Consensus       479 ~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  479 GVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             EEEecCCCcceeEecccCceeEecC
Confidence            9999   556799999999999996

>KOG0285|consensus

Probab=100.00  E-value=5.3e-31  Score=224.10  Aligned_cols=234  Identities=26%  Similarity=0.476  Sum_probs=209.4

Q ss_pred             CCccceEEE--EeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEE
Q psy9182         232 ENSKGVYCL--QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMV  307 (486)
Q Consensus       232 ~~~~~v~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~  307 (486)
                      +|...+.|+  .|.+..+++|+.|++|+|||+.+++...++.+|...|..+++.  -.++++++.|+.|+.||++..+.+
T Consensus       149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvI  228 (460)
T KOG0285|consen  149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVI  228 (460)
T ss_pred             hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhH
Confidence            344444444  4557889999999999999999999999999999999999983  469999999999999999999999


Q ss_pred             EEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEEEeCCCcEEEEE
Q psy9182         308 NTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWN  383 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd  383 (486)
                      +.+.+|-..|.+++..|  +.+++|+.|..+++||+++...+   ..+.+|..+|..+.+.  +..+++|+.|++|++||
T Consensus       229 R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V---~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWD  305 (460)
T KOG0285|consen  229 RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV---HVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWD  305 (460)
T ss_pred             HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE---EEecCCCCcceeEEeecCCCceEEecCCceEEEee
Confidence            99999999999999986  59999999999999999998755   6788999999999984  77899999999999999


Q ss_pred             CCCceEEEEEcCCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEeCCCcEE
Q psy9182         384 TSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIK  460 (486)
Q Consensus       384 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~  460 (486)
                      ++.|+....+..|...+.++..++  ..+|+++.| .|+-|++..|+.+..+.+|..-|++++. +...+++|++.|.+.
T Consensus       306 l~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~  384 (460)
T KOG0285|consen  306 LRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIM  384 (460)
T ss_pred             eccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEE
Confidence            999999999999999999999873  456666655 6999999999999999999999999999 778899999999999


Q ss_pred             EEeCCCCCC
Q psy9182         461 VWNLVAALD  469 (486)
Q Consensus       461 iwdl~~~~~  469 (486)
                      +||..++-.
T Consensus       385 fwdwksg~n  393 (460)
T KOG0285|consen  385 FWDWKSGHN  393 (460)
T ss_pred             EEecCcCcc
Confidence            999988754

>KOG0296|consensus

Probab=99.98  E-value=1.6e-30  Score=221.92  Aligned_cols=279  Identities=18%  Similarity=0.282  Sum_probs=228.7

Q ss_pred             hcccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182          99 LKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ....|+..|+++.|+.||.+||||+.+|.|+||+..++.....+..--..|.++.|++               .+..|+.
T Consensus       101 eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp---------------~a~illA  165 (399)
T KOG0296|consen  101 ELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHP---------------RAHILLA  165 (399)
T ss_pred             EecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecc---------------cccEEEe
Confidence            4467899999999999999999999999999999999999999987778899999985               4556999


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                      |+.||.+.+|.+.+........                             .+..+...=++.|+|++++++..||+|++
T Consensus       166 G~~DGsvWmw~ip~~~~~kv~~-----------------------------Gh~~~ct~G~f~pdGKr~~tgy~dgti~~  216 (399)
T KOG0296|consen  166 GSTDGSVWMWQIPSQALCKVMS-----------------------------GHNSPCTCGEFIPDGKRILTGYDDGTIIV  216 (399)
T ss_pred             ecCCCcEEEEECCCcceeeEec-----------------------------CCCCCcccccccCCCceEEEEecCceEEE
Confidence            9999999999986532221111                             12233444567889999999999999999


Q ss_pred             EECCCceeeEEEcCCc-ccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec--------ccCccEEEEEEcC---
Q psy9182         259 WDRVSLQCIKVLTGHT-GSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI--------HHCEAVLHLRFSN---  324 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------~~~~~i~~~~~~~---  324 (486)
                      ||..+++++..+.+.. ....++.+  .+..++.|+.++.+++-+..+|+.+....        .+...+.++.+.+   
T Consensus       217 Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss  296 (399)
T KOG0296|consen  217 WNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSS  296 (399)
T ss_pred             EecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhccccc
Confidence            9999999998876322 23456655  78899999999999999999998877665        2334444554433   


Q ss_pred             --CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE
Q psy9182         325 --GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA  401 (486)
Q Consensus       325 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~  401 (486)
                        .+.++|+-||+|.|||+.....    +..-.|...|+.+.|.+ .+|++++.+|.|+.||.++|+++..+.+|...|.
T Consensus       297 ~lpL~A~G~vdG~i~iyD~a~~~~----R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il  372 (399)
T KOG0296|consen  297 KLPLAACGSVDGTIAIYDLAASTL----RHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTGHQMGIL  372 (399)
T ss_pred             ccchhhcccccceEEEEecccchh----heeccCCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEecCchhee
Confidence              2789999999999999987643    33446888899999955 8999999999999999999999999999999999


Q ss_pred             EEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         402 CLQY--RDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       402 ~~~~--~~~~l~~~~~dg~v~iwd~~  425 (486)
                      +++.  +.+++++++.|++.+||+..
T Consensus       373 ~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  373 DFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             EEEEcCCCcEEEEecCCCeEEEEecC
Confidence            8887  58999999999999999874

>KOG0645|consensus

Probab=99.97  E-value=2e-29  Score=206.91  Aligned_cols=274  Identities=24%  Similarity=0.440  Sum_probs=221.0

Q ss_pred             ccccccccccCCccC-cceEEEeecCceeeecccccc---cceeee-cCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         101 PMLQRDFISLLPNFD-EKYIVSASGDRTIKVWNTSSC---EFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~~~---~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      +.|...+..++++|. |..||||+.|..|+||+...+   .+...+ .+|+..|+.++|+               |.+++
T Consensus        11 ~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAws---------------p~g~~   75 (312)
T KOG0645|consen   11 SGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWS---------------PHGRY   75 (312)
T ss_pred             cCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeec---------------CCCcE
Confidence            455667888899998 889999999999999999853   344444 4799999999998               67889


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE--EEeCCCEEEEEecC
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC--LQYDDHKIVSGLRD  253 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d  253 (486)
                      |+++|.|.++.+|.-..+..                             ..+....+|...+-|  ++.+|.+||+++.|
T Consensus        76 La~aSFD~t~~Iw~k~~~ef-----------------------------ecv~~lEGHEnEVK~Vaws~sG~~LATCSRD  126 (312)
T KOG0645|consen   76 LASASFDATVVIWKKEDGEF-----------------------------ECVATLEGHENEVKCVAWSASGNYLATCSRD  126 (312)
T ss_pred             EEEeeccceEEEeecCCCce-----------------------------eEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence            99999999999998432211                             112223345555544  55689999999999


Q ss_pred             CeEEEEECCC---ceeeEEEcCCcccEEEEEecC--CEEEEEeCCCcEEEEECC---CCcEEEEecccCccEEEEEEcC-
Q psy9182         254 NTIKVWDRVS---LQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVN---TGEMVNTLIHHCEAVLHLRFSN-  324 (486)
Q Consensus       254 g~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~vwd~~---~~~~~~~~~~~~~~i~~~~~~~-  324 (486)
                      +.|-||.+..   .++...++.|...|..+.|.+  .+|++++.|.+|++|+-.   ..++..++.+|...|.+++|++ 
T Consensus       127 KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~  206 (312)
T KOG0645|consen  127 KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI  206 (312)
T ss_pred             CeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC
Confidence            9999999864   467788999999999999966  899999999999999876   3467899999999999999986 


Q ss_pred             -CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCc------eEEE-EEcCC
Q psy9182         325 -GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC------EFVR-TLNGH  396 (486)
Q Consensus       325 -~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~------~~~~-~~~~~  396 (486)
                       ..|++++.|++++||.....       ....|...+..++|+...|++++.|+.|++|.-...      +.+. .-..|
T Consensus       207 G~rl~s~sdD~tv~Iw~~~~~-------~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aH  279 (312)
T KOG0645|consen  207 GSRLVSCSDDGTVSIWRLYTD-------LSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAH  279 (312)
T ss_pred             CceEEEecCCcceEeeeeccC-------cchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhccc
Confidence             49999999999999986532       223467888999999889999999999999976542      1122 33478


Q ss_pred             cccEEEEEeC---CCEEEEEeCCCcEEEEECC
Q psy9182         397 KRGIACLQYR---DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       397 ~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~  425 (486)
                      ...|+++.|+   .++|++|+.||.|++|.+.
T Consensus       280 e~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  280 EVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             ccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            8999999997   4789999999999999874

>KOG0276|consensus

Probab=99.97  E-value=1.8e-30  Score=235.91  Aligned_cols=231  Identities=29%  Similarity=0.535  Sum_probs=212.0

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      ..+.++|....++++-.+|.|.|||.++...++.+....-+|.+..|  ..+.+++|+.|..|+||+..+++.++.+..|
T Consensus        17 KsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH   96 (794)
T KOG0276|consen   17 KSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAH   96 (794)
T ss_pred             eeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeecc
Confidence            34456778889999999999999999999999999988889988888  6789999999999999999999999999999


Q ss_pred             CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCce
Q psy9182         314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .+.|.+++.+|.  ++++++.|-.|++||.+..  ....+.+.+|...|.+++|   |.+.+++++-|++|++|.+.+..
T Consensus        97 ~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~--wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~  174 (794)
T KOG0276|consen   97 SDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE--WACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPH  174 (794)
T ss_pred             ccceeeeeecCCCCeEEecCCccEEEEeeccCc--eeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCC
Confidence            999999999985  8999999999999999765  3556889999999999999   77899999999999999999999


Q ss_pred             EEEEEcCCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE--EEEEeCCCcEEEE
Q psy9182         389 FVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVW  462 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--l~s~~~dg~v~iw  462 (486)
                      +..++++|..+|+|+.+    +..+|++|++|.+|+|||.++..|++++++|...|..+.|++.+  +++||+||+||||
T Consensus       175 ~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriW  254 (794)
T KOG0276|consen  175 PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIW  254 (794)
T ss_pred             CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEe
Confidence            99999999999999998    24599999999999999999999999999999999999996654  9999999999999


Q ss_pred             eCCCCC
Q psy9182         463 NLVAAL  468 (486)
Q Consensus       463 dl~~~~  468 (486)
                      +-.+-.
T Consensus       255 hs~Ty~  260 (794)
T KOG0276|consen  255 NSKTYK  260 (794)
T ss_pred             cCccee
Confidence            977643

>KOG1408|consensus

Probab=99.97  E-value=4.1e-30  Score=236.97  Aligned_cols=370  Identities=22%  Similarity=0.332  Sum_probs=263.5

Q ss_pred             hhhhhhcccccccccccCCccCcceEEEeecCceeeecccccccc---eeeecCcccceeEEEeecceeEecCCCCceec
Q psy9182          94 HINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY  170 (486)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~---~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~  170 (486)
                      +++....+..-.|.+++.|++....|.+--.|..++|||+..-+.   ...+-.|...|+.+.--+--   .-....-.+
T Consensus       314 ~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~n---v~~~~~acl  390 (1080)
T KOG1408|consen  314 PKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCN---VHSPTAACL  390 (1080)
T ss_pred             ccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeecccccc---ccCcccccC
Confidence            444555566667888999999999999999999999999976443   34455788888887653310   000011111


Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCC-----CCC--CCcccccccccCcee-EEEEeccCCCccceEEEEe
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGG-----PPP--SGPSIENNWRMGKFL-LQRINCRSENSKGVYCLQY  242 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~  242 (486)
                      +. ..+++++.|++|++||+............-..     ...  ....+......+.+. ...-.+........++++|
T Consensus       391 p~-~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp  469 (1080)
T KOG1408|consen  391 PR-GCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP  469 (1080)
T ss_pred             Cc-cceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC
Confidence            22 34899999999999998652211111000000     000  000000000000000 0000111223445678899


Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-----cCCEEEEEeCCCcEEEEECCCC-cEEEEecccCcc
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-----DERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEA  316 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~  316 (486)
                      ++++||+|..-|+++||++.+.+....+..|...|.|+.+     ..++|++++.|..|+|||+... .++.++.+|...
T Consensus       470 ~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSss  549 (1080)
T KOG1408|consen  470 DGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSS  549 (1080)
T ss_pred             CcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccc
Confidence            9999999999999999999999999999999999999998     3578999999999999999654 567888999999


Q ss_pred             EEEEEEcC----CeEEEEeCCCcEEEEECCCCCce--eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182         317 VLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEI--TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       317 i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      |+++.|..    -.+++++.|+.|.+--.+.....  .......-....+..++.  +.+++++++.|..|+|||+++++
T Consensus       550 ITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgK  629 (1080)
T KOG1408|consen  550 ITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGK  629 (1080)
T ss_pred             eeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccc
Confidence            99999963    27899999988875433321111  111111122345666666  56799999999999999999999


Q ss_pred             EEEEEcC---CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEE
Q psy9182         389 FVRTLNG---HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV  461 (486)
Q Consensus       389 ~~~~~~~---~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~i  461 (486)
                      .++.|++   |.+....+..  +|.|+++.+.|.++.++|.-+|+++..+.+|...|+.+.|  |-+.|++.+.||+|.|
T Consensus       630 q~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFv  709 (1080)
T KOG1408|consen  630 QVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFV  709 (1080)
T ss_pred             eeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEE
Confidence            9999985   4455555554  5899999999999999999999999999999999999999  7788999999999999


Q ss_pred             EeCCCC
Q psy9182         462 WNLVAA  467 (486)
Q Consensus       462 wdl~~~  467 (486)
                      |.+...
T Consensus       710 W~lp~~  715 (1080)
T KOG1408|consen  710 WKLPLT  715 (1080)
T ss_pred             EECchh
Confidence            998764

>KOG0284|consensus

Probab=99.97  E-value=1.7e-31  Score=230.85  Aligned_cols=248  Identities=26%  Similarity=0.491  Sum_probs=214.3

Q ss_pred             CCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       232 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      .+...++++.|+|+.|++|+..|...+|+..+......++.|..+|.++.|  ++.++++|+.+|.|++|+..-.. ++.
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-Vk~  174 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-VKI  174 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-hHH
Confidence            466778899999999999999999999998766666677889999999999  89999999999999999986443 444


Q ss_pred             ecc-cCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         310 LIH-HCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       310 ~~~-~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      +.. |...|.+++|+++  .+++++.||.|+|||....++.   ..+.+|.-.|.+++|  ...++++++.|..|++||.
T Consensus       175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee---~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDp  251 (464)
T KOG0284|consen  175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE---RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDP  251 (464)
T ss_pred             hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh---heeccCCCCcceeccCCccceeEEccCCceeEeecC
Confidence            444 4589999999964  8999999999999999887654   556899999999999  5678999999999999999


Q ss_pred             CCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcE
Q psy9182         385 SSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKI  459 (486)
Q Consensus       385 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v  459 (486)
                      ++++++.++.+|...|..+.|+  +++|++++.|..++++|+++.+.+..+++|...|+++.|   ....|.+|+.||.|
T Consensus       252 rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsv  331 (464)
T KOG0284|consen  252 RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSV  331 (464)
T ss_pred             CCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCce
Confidence            9999999999999999999995  899999999999999999999999999999999999999   77889999999999


Q ss_pred             EEEeCCCCCC--CCCCccccceeeee
Q psy9182         460 KVWNLVAALD--PRAPTTTLCLRTLV  483 (486)
Q Consensus       460 ~iwdl~~~~~--~~~~~~~~~~~~~~  483 (486)
                      ..|.+.....  ...++...++-.+.
T Consensus       332 vh~~v~~~~p~~~i~~AHd~~iwsl~  357 (464)
T KOG0284|consen  332 VHWVVGLEEPLGEIPPAHDGEIWSLA  357 (464)
T ss_pred             EEEeccccccccCCCcccccceeeee
Confidence            9999884332  22334444554443

>KOG0275|consensus

Probab=99.97  E-value=3.1e-31  Score=222.79  Aligned_cols=273  Identities=25%  Similarity=0.411  Sum_probs=230.2

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCc--------ccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH--------KRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h--------~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      .+..+-|..|+|||+||++|+.||-|.+||..+|++.+.++..        ..+|.|+.|                    
T Consensus       212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~F--------------------  271 (508)
T KOG0275|consen  212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISF--------------------  271 (508)
T ss_pred             cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEee--------------------
Confidence            3445668899999999999999999999999999987776532        223333333                    


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                                                                                        +.|...+++|+.||
T Consensus       272 ------------------------------------------------------------------SRDsEMlAsGsqDG  285 (508)
T KOG0275|consen  272 ------------------------------------------------------------------SRDSEMLASGSQDG  285 (508)
T ss_pred             ------------------------------------------------------------------cccHHHhhccCcCC
Confidence                                                                              33667789999999


Q ss_pred             eEEEEECCCceeeEEEc-CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEE
Q psy9182         255 TIKVWDRVSLQCIKVLT-GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVT  329 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~  329 (486)
                      .|++|.+.+|.|++.|. .|...|+|++|  |+..+++++.|.++++.-+++|++++.+.+|.+.|....|.+  ..+++
T Consensus       286 kIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iis  365 (508)
T KOG0275|consen  286 KIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIIS  365 (508)
T ss_pred             cEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEE
Confidence            99999999999999987 89999999999  889999999999999999999999999999999999999975  49999


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc---c-cE-E
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---R-GI-A  401 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~-~v-~  401 (486)
                      ++.||+|++|+..+.+....++.. +...+|.++..   +...++++...+++++.++. |+.++.+....   + -| .
T Consensus       366 aSsDgtvkvW~~KtteC~~Tfk~~-~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~  443 (508)
T KOG0275|consen  366 ASSDGTVKVWHGKTTECLSTFKPL-GTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINA  443 (508)
T ss_pred             ecCCccEEEecCcchhhhhhccCC-CCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEE
Confidence            999999999999998877554433 34566666665   77899999999999999975 78888886332   1 23 4


Q ss_pred             EEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         402 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       402 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ++++.|.++.+.++|+.++.|...+|+..+.+..|...|..++.  +.+.|++-++||.+++|.
T Consensus       444 ~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  444 ILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             EecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            45667999999999999999999999999999999999999888  667799999999999995

>KOG0292|consensus

Probab=99.97  E-value=2.1e-29  Score=237.54  Aligned_cols=275  Identities=23%  Similarity=0.458  Sum_probs=219.3

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .+-.++|+|...+++++-..|.|++||..-+.++..|..|.++|..+.|++                             
T Consensus        11 RvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-----------------------------   61 (1202)
T KOG0292|consen   11 RVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-----------------------------   61 (1202)
T ss_pred             cccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecC-----------------------------
Confidence            456778999999999999999999999999999999999999999999963                             


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ  265 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  265 (486)
                                                                               .+.++++|+.|-.|++|+.++.+
T Consensus        62 ---------------------------------------------------------~qplFVSGGDDykIkVWnYk~rr   84 (1202)
T KOG0292|consen   62 ---------------------------------------------------------TQPLFVSGGDDYKIKVWNYKTRR   84 (1202)
T ss_pred             ---------------------------------------------------------CCCeEEecCCccEEEEEecccce
Confidence                                                                     34456777777777777777778


Q ss_pred             eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEEC
Q psy9182         266 CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       266 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~  341 (486)
                      ++.++.+|-..|..+.|  .-.++++++.|.+|+||+..+++++..+.+|...|+|..|+|  +.+++++-|.+|++||+
T Consensus        85 clftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi  164 (1202)
T KOG0292|consen   85 CLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI  164 (1202)
T ss_pred             ehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEee
Confidence            88888888888877777  345788888888888888888888888888888888888876  47778888888888886


Q ss_pred             CCCC--------------------------ceeeEEeeecCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCce--EEE
Q psy9182         342 VSPN--------------------------EITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCE--FVR  391 (486)
Q Consensus       342 ~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d~~i~iwd~~~~~--~~~  391 (486)
                      ..-+                          .......+.+|...|+.++|.+  ..+++|+.|..|++|....-+  .+.
T Consensus       165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvD  244 (1202)
T KOG0292|consen  165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD  244 (1202)
T ss_pred             cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeeh
Confidence            4211                          1123356789999999999976  799999999999999976543  356


Q ss_pred             EEcCCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCC
Q psy9182         392 TLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~  466 (486)
                      +..+|.+.|.++-|++  +++++.++|++|+|||+...+.+++++...+.-+.++-+++. |+.++.|+-+.+|.++-
T Consensus       245 tcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleR  322 (1202)
T KOG0292|consen  245 TCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLER  322 (1202)
T ss_pred             hhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEcc
Confidence            7789999999999985  899999999999999999999999997666777777764332 44445566677777763

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=1.1e-28  Score=254.71  Aligned_cols=275  Identities=21%  Similarity=0.376  Sum_probs=214.1

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccc----c----ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----E----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----~----~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      |...|.++.|+|+|++||+|+.||.|+|||..+.    .    ....+.+ ...|.+++|++              .++.
T Consensus       482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~--------------~~~~  546 (793)
T PLN00181        482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELAS-RSKLSGICWNS--------------YIKS  546 (793)
T ss_pred             CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecc-cCceeeEEecc--------------CCCC
Confidence            5667889999999999999999999999997532    1    1223333 34677888753              3456


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---CCCEEEEEe
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY---DDHKIVSGL  251 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~  251 (486)
                      +|++++.||+|++||+.+...                            +..   ...|...+.++.+   ++.+|++|+
T Consensus       547 ~las~~~Dg~v~lWd~~~~~~----------------------------~~~---~~~H~~~V~~l~~~p~~~~~L~Sgs  595 (793)
T PLN00181        547 QVASSNFEGVVQVWDVARSQL----------------------------VTE---MKEHEKRVWSIDYSSADPTLLASGS  595 (793)
T ss_pred             EEEEEeCCCeEEEEECCCCeE----------------------------EEE---ecCCCCCEEEEEEcCCCCCEEEEEc
Confidence            799999999999999854321                            111   1235555655544   568999999


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCc-EEEEecccCccEEEEEEcC-Ce
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGE-MVNTLIHHCEAVLHLRFSN-GM  326 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~~~~-~~  326 (486)
                      .||.|++||+.++..+..+..+ ..+.++.|   ++.++++|+.||.|++||++++. .+..+.+|...|.++.|.+ ..
T Consensus       596 ~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~  674 (793)
T PLN00181        596 DDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSST  674 (793)
T ss_pred             CCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCE
Confidence            9999999999999988888754 57888887   57899999999999999998765 4667788999999999964 58


Q ss_pred             EEEEeCCCcEEEEECCCCC---ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE--------
Q psy9182         327 MVTCSKDRSIAVWDMVSPN---EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL--------  393 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~--------  393 (486)
                      +++++.|+.|++||++...   .......+.+|...+.++.+  ++.+|++|+.|+.|++|+......+..+        
T Consensus       675 lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~  754 (793)
T PLN00181        675 LVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPV  754 (793)
T ss_pred             EEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcc
Confidence            9999999999999997532   11234567788888887777  7899999999999999998765443322        


Q ss_pred             -----cCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182         394 -----NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       394 -----~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~  424 (486)
                           ..+...|.++.|+  +..|++|+.||.|+||++
T Consensus       755 ~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        755 SGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             cccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence                 2344568888884  789999999999999996

>KOG0313|consensus

Probab=99.97  E-value=4.2e-29  Score=214.25  Aligned_cols=260  Identities=28%  Similarity=0.449  Sum_probs=207.6

Q ss_pred             cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC--CCEEEEE
Q psy9182         173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD--DHKIVSG  250 (486)
Q Consensus       173 ~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  250 (486)
                      +..+++|+.||.+++||.....                             ...+..+.+....+..+..+  ...++++
T Consensus       115 ~~~IltgsYDg~~riWd~~Gk~-----------------------------~~~~~Ght~~ik~v~~v~~n~~~~~fvsa  165 (423)
T KOG0313|consen  115 SKWILTGSYDGTSRIWDLKGKS-----------------------------IKTIVGHTGPIKSVAWVIKNSSSCLFVSA  165 (423)
T ss_pred             CceEEEeecCCeeEEEecCCce-----------------------------EEEEecCCcceeeeEEEecCCccceEEEe
Confidence            5678899999999999963211                             12222222222222222223  3469999


Q ss_pred             ecCCeEEEEECCCceee----EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC----------------------
Q psy9182         251 LRDNTIKVWDRVSLQCI----KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN----------------------  302 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~----------------------  302 (486)
                      +.|.++++|..+.++..    +.-.||...|-+++.  ++..+++|+.|.+|.+|+..                      
T Consensus       166 s~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~  245 (423)
T KOG0313|consen  166 SMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREK  245 (423)
T ss_pred             cCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhh
Confidence            99999999988776543    344599999999987  78999999999999999932                      


Q ss_pred             ---CCcEEEEecccCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC
Q psy9182         303 ---TGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD  376 (486)
Q Consensus       303 ---~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d  376 (486)
                         ++.++..+.+|..+|.++.|++ ..+++++.|.+|+.||+.++.......    .....++++.  ..++|++|+.|
T Consensus       246 ~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~----~~ksl~~i~~~~~~~Ll~~gssd  321 (423)
T KOG0313|consen  246 EGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLT----TNKSLNCISYSPLSKLLASGSSD  321 (423)
T ss_pred             cccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeee----cCcceeEeecccccceeeecCCC
Confidence               2235667889999999999986 488999999999999999987654322    3456677777  67899999999


Q ss_pred             CcEEEEECCCce---EEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCe-eeEEecCcccCeEEEEe-cCC
Q psy9182         377 RTIKVWNTSSCE---FVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF-DAK  448 (486)
Q Consensus       377 ~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~-~~~  448 (486)
                      ..|++||.+++.   ...++.+|.+.|.++.|+   ..+|++|+.|+++++||+++.+ ++..+.+|.+.|.++.| ++.
T Consensus       322 r~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~  401 (423)
T KOG0313|consen  322 RHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGG  401 (423)
T ss_pred             CceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCc
Confidence            999999998753   456788999999999995   5789999999999999999877 99999999999999999 788


Q ss_pred             EEEEEeCCCcEEEEeCC
Q psy9182         449 RIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       449 ~l~s~~~dg~v~iwdl~  465 (486)
                      .+++||.|.+|+++.-.
T Consensus       402 ~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  402 LIVSGGADNKLRIFKGS  418 (423)
T ss_pred             eEEeccCcceEEEeccc
Confidence            99999999999998754

>KOG0278|consensus

Probab=99.97  E-value=7.7e-30  Score=206.87  Aligned_cols=279  Identities=24%  Similarity=0.394  Sum_probs=230.4

Q ss_pred             ccccccccccCCc---cCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         101 PMLQRDFISLLPN---FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s---~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      ..|.+.++.++++   |+|-+|++++.||.=.+-+-+||..+.+|.+|++.|+....+               .+...-+
T Consensus        11 ~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~---------------~na~~aa   75 (334)
T KOG0278|consen   11 HGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLN---------------KNATRAA   75 (334)
T ss_pred             cCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecC---------------chhhhhh
Confidence            3566777777776   589999999999999999999999999999999999988886               3455678


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                      +++.|-+-++||.-++.+....                              .+.|....++|+.|.++|++|+.+..++
T Consensus        76 saaadftakvw~a~tgdelhsf------------------------------~hkhivk~~af~~ds~~lltgg~ekllr  125 (334)
T KOG0278|consen   76 SAAADFTAKVWDAVTGDELHSF------------------------------EHKHIVKAVAFSQDSNYLLTGGQEKLLR  125 (334)
T ss_pred             hhcccchhhhhhhhhhhhhhhh------------------------------hhhheeeeEEecccchhhhccchHHHhh
Confidence            8999999999997665543322                              1235566677888999999999999999


Q ss_pred             EEECCCce-eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC-CeEEEEeCC
Q psy9182         258 VWDRVSLQ-CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKD  333 (486)
Q Consensus       258 i~d~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~d  333 (486)
                      |||+...+ +...+.+|.+.|..+-|  ..+.+++++.|++|++||.+++..++++.. ...|.++.++. +.+++....
T Consensus       126 vfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-~s~VtSlEvs~dG~ilTia~g  204 (334)
T KOG0278|consen  126 VFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF-NSPVTSLEVSQDGRILTIAYG  204 (334)
T ss_pred             hhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec-CCCCcceeeccCCCEEEEecC
Confidence            99987644 56788899999999988  677888889999999999999999999876 57788888875 588888889


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEE--EEEeCCCEEEEEeCCCcEEEEECCCceEEEEE-cCCcccEEEEEe--CCC
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQY--RDR  408 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~  408 (486)
                      +.|.+||..+-..++...    ....|.  ++.++...+++|+.|..++.||..+++.+..+ ++|.++|-|+.|  +|.
T Consensus       205 ssV~Fwdaksf~~lKs~k----~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE  280 (334)
T KOG0278|consen  205 SSVKFWDAKSFGLLKSYK----MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGE  280 (334)
T ss_pred             ceeEEeccccccceeecc----CccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCc
Confidence            999999998876654332    233444  44457789999999999999999999998886 899999999988  488


Q ss_pred             EEEEEeCCCcEEEEECCCCee
Q psy9182         409 LVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      ..++|+.||+|++|....++.
T Consensus       281 ~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  281 LYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             eeeccCCCceEEEEEecCCCc
Confidence            999999999999999876554

>KOG0277|consensus

Probab=99.97  E-value=3.6e-29  Score=203.49  Aligned_cols=218  Identities=22%  Similarity=0.491  Sum_probs=191.2

Q ss_pred             CCEEEEEecCCeEEEEECCC-ceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEE
Q psy9182         244 DHKIVSGLRDNTIKVWDRVS-LQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH  319 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~  319 (486)
                      .+.+++++.||++++||+.. ..++..++.|..+|.++.|   +...+++++.||+|++|+...++.+.++.+|...|..
T Consensus        73 e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~  152 (311)
T KOG0277|consen   73 ENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQ  152 (311)
T ss_pred             cceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEE
Confidence            45677888899999998543 4578888999999999999   5678888899999999999999999999999999999


Q ss_pred             EEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCc-eEEEE
Q psy9182         320 LRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSC-EFVRT  392 (486)
Q Consensus       320 ~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~-~~~~~  392 (486)
                      ..|+|   +.+++++.|+.+++||++.....   ..+..|...+.++.|   +.+.+++|+.|+.|+.||+++. .++..
T Consensus       153 a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~---~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~e  229 (311)
T KOG0277|consen  153 AAFSPHIPNLFASASGDGTLRLWDVRSPGKF---MSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFE  229 (311)
T ss_pred             EecCCCCCCeEEEccCCceEEEEEecCCCce---eEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcccccee
Confidence            99985   69999999999999999887544   336678899999999   7889999999999999999884 46888


Q ss_pred             EcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCC-eeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeC
Q psy9182         393 LNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       393 ~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl  464 (486)
                      +.+|.-.|..+.++   ..+|++++.|-+++|||...+ ..+.+...|+.-|..+.|   ++.++|+++.|+.++||+-
T Consensus       230 L~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  230 LNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            99999999999996   578999999999999999744 456677889999999998   8899999999999999983

>KOG1408|consensus

Probab=99.97  E-value=3.9e-28  Score=224.01  Aligned_cols=359  Identities=19%  Similarity=0.305  Sum_probs=241.2

Q ss_pred             hcccccccccccCCccCcceEEEee--cCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCcee--c--
Q psy9182          99 LKPMLQRDFISLLPNFDEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIR--Y--  170 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~~~~l~tg~--~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~--~--  170 (486)
                      +-..++..++|++|+++|+|+|+|-  ....++||++.....+..|..|+..|+|++|+  ++++++.+......  +  
T Consensus        73 lvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~d  152 (1080)
T KOG1408|consen   73 LVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVND  152 (1080)
T ss_pred             eecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecCCCcEEEeeccccceEEEhhh
Confidence            3344566899999999999999974  77889999999999999999999999999997  45677655543322  2  


Q ss_pred             ----------------------cCcceeecCCCCCcceeeeccccc----------------------------------
Q psy9182         171 ----------------------RDEFQIVSSSHDDTILIWDFLNYS----------------------------------  194 (486)
Q Consensus       171 ----------------------~~~~~l~s~s~dg~i~vWd~~~~~----------------------------------  194 (486)
                                            .|+.++++.+ ...|++|.++...                                  
T Consensus       153 Wr~N~~~asnkiss~Vsav~fsEdgSYfvT~g-nrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicA  231 (1080)
T KOG1408|consen  153 WRVNSSGASNKISSVVSAVAFSEDGSYFVTSG-NRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICA  231 (1080)
T ss_pred             hhhcccccccccceeEEEEEEccCCceeeeee-eeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccc
Confidence                                  1233333332 3455666553322                                  


Q ss_pred             ------------------------------------------------------------ccccCCCCCCCCCCCCcccc
Q psy9182         195 ------------------------------------------------------------ETPIQGGGGGGPPPSGPSIE  214 (486)
Q Consensus       195 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  214 (486)
                                                                                  ............    ..+.
T Consensus       232 estfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg----~d~a  307 (1080)
T KOG1408|consen  232 ESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALG----SDTA  307 (1080)
T ss_pred             cceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhhhccccccccccc----cchh
Confidence                                                                        111111000000    0000


Q ss_pred             cccccCceeEEEEeccCCCccceEEEEe--CCCEEEEEecCCeEEEEECCCceee---EEEcCCcccEEEEEe-------
Q psy9182         215 NNWRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCI---KVLTGHTGSVLCLQY-------  282 (486)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~v~~~~~-------  282 (486)
                      ...+....   ........-...+++.+  ....|.+...|..++|||++.-..+   ..+-.|...|+.+..       
T Consensus       308 ~~~q~~~~---~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~  384 (1080)
T KOG1408|consen  308 NLSQPEPK---NSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHS  384 (1080)
T ss_pred             hccccccc---ccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccC
Confidence            00000000   00000011112233444  5678999999999999998874332   233347777766543       


Q ss_pred             ------cCCEEEEEeCCCcEEEEECCCCcEEEEe-------------------------------------cccCccEEE
Q psy9182         283 ------DERVIISGSSDSTVRVWDVNTGEMVNTL-------------------------------------IHHCEAVLH  319 (486)
Q Consensus       283 ------~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------------------------~~~~~~i~~  319 (486)
                            -...+++++.|++|++||+..+..-..+                                     -.....+.+
T Consensus       385 ~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~  464 (1080)
T KOG1408|consen  385 PTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRA  464 (1080)
T ss_pred             cccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEE
Confidence                  1246899999999999999752110000                                     012335788


Q ss_pred             EEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCC-ceEEE
Q psy9182         320 LRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSS-CEFVR  391 (486)
Q Consensus       320 ~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~-~~~~~  391 (486)
                      ++.+|+  +|++|...|.+++|++...+..   .....|...|.|+.+     ..++|++++.|..|.+||+.. ..+++
T Consensus       465 ~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~---~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~q  541 (1080)
T KOG1408|consen  465 LAVSPDGQHLASGDRGGNLRVYDLQELEYT---CFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQ  541 (1080)
T ss_pred             EEECCCcceecccCccCceEEEEehhhhhh---hheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhh
Confidence            888875  8999999999999999876544   556789999999998     357899999999999999754 45566


Q ss_pred             EEcCCcccEEEEEe---------------------------------------------------CCCEEEEEeCCCcEE
Q psy9182         392 TLNGHKRGIACLQY---------------------------------------------------RDRLVVSGSSDNTIR  420 (486)
Q Consensus       392 ~~~~~~~~v~~~~~---------------------------------------------------~~~~l~~~~~dg~v~  420 (486)
                      ++.+|...|+++.|                                                   ..+++++++.|..|+
T Consensus       542 tld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnir  621 (1080)
T KOG1408|consen  542 TLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIR  621 (1080)
T ss_pred             hhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceE
Confidence            77777776665544                                                   124789999999999


Q ss_pred             EEECCCCeeeEEecC---cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         421 LWDIECGACLRVLEG---HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       421 iwd~~~~~~~~~~~~---h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      |||+.+|++.+.|++   |.+....+..  .|.||++...|.++.++|+.++.
T Consensus       622 if~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgE  674 (1080)
T KOG1408|consen  622 IFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGE  674 (1080)
T ss_pred             EEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccch
Confidence            999999999999975   4455555555  78899999999999999998553

>KOG1446|consensus

Probab=99.97  E-value=2.2e-27  Score=199.69  Aligned_cols=278  Identities=21%  Similarity=0.328  Sum_probs=228.4

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ....+.++.|+++|.++++++.|.+++|+|..+|+.++++..++-++..+.|.                           
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Ft---------------------------   65 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFT---------------------------   65 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEe---------------------------
Confidence            44578899999999999999999999999999999999999888888877773                           


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--cCCeEEEEE
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL--RDNTIKVWD  260 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~dg~i~i~d  260 (486)
                                                                                 .....++.++  .|.+|+..+
T Consensus        66 -----------------------------------------------------------h~~~~~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen   66 -----------------------------------------------------------HHSNTVIHSSTKEDDTIRYLS   86 (311)
T ss_pred             -----------------------------------------------------------cCCceEEEccCCCCCceEEEE
Confidence                                                                       1111222222  377899999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAV  338 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i  338 (486)
                      +.+.+.++.|.||...|.+++.  -++.+++++.|++|++||++..++...+.....++.+....+-.+|++...+.|++
T Consensus        87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkL  166 (311)
T KOG1446|consen   87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKL  166 (311)
T ss_pred             eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEE
Confidence            9999999999999999998877  46899999999999999999888888776666666555444557777777779999


Q ss_pred             EECCCCCc--eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE-----EEEEeCCCE
Q psy9182         339 WDMVSPNE--ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI-----ACLQYRDRL  409 (486)
Q Consensus       339 ~d~~~~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~  409 (486)
                      ||++.-..  ........+.....+.+.|  ||++++.++..+.+++.|.-+|....++..+...-     .++.+++++
T Consensus       167 yD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~F  246 (311)
T KOG1446|consen  167 YDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKF  246 (311)
T ss_pred             EEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcE
Confidence            99987532  2222222245667778888  89999999999999999999999999988766432     456678999


Q ss_pred             EEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCCC
Q psy9182         410 VVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       410 l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      +++|+.||+|.+|++++|..+..+.+ +..++.++.|++++..-++.+..+.+|=...
T Consensus       247 vl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~  304 (311)
T KOG1446|consen  247 VLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDE  304 (311)
T ss_pred             EEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEeccc
Confidence            99999999999999999999999998 7899999999999988888889999997653

>KOG0265|consensus

Probab=99.97  E-value=2.6e-28  Score=203.23  Aligned_cols=222  Identities=28%  Similarity=0.489  Sum_probs=185.2

Q ss_pred             EeCCCEEEEEecCCeEEEEEC-CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDR-VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~-~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      .|+|..+++|+.|..|.+|+. ...+....+++|.++|..+.+  |++.+++++.|.+++.||+++|+.++.++.|...+
T Consensus        56 ~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~v  135 (338)
T KOG0265|consen   56 HPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFV  135 (338)
T ss_pred             CCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhcccccee
Confidence            345666666666666666663 334455677799999999999  89999999999999999999999999999999999


Q ss_pred             EEEEEc---CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         318 LHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       318 ~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      ..+...   +.++.+++.|+++++||+++.+.++..    .....++++.|  .+..+.+|+-|+.|++||++.......
T Consensus       136 Ns~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~----~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~  211 (338)
T KOG0265|consen  136 NSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF----ENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYT  211 (338)
T ss_pred             eecCccccCCeEEEecCCCceEEEEeecccchhhcc----ccceeEEEEEecccccceeeccccCceeeeccccCcceEE
Confidence            988865   347889999999999999987765432    34678889999  677899999999999999999999999


Q ss_pred             EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC----CeeeEEecCccc----CeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         393 LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC----GACLRVLEGHEE----LVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       393 ~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~----~~~~~~~~~h~~----~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      +.+|...|+.++.  +|.++.+-+.|.++++||++.    .+++..+.+|..    .....+|  +++.+-+|+.|..++
T Consensus       212 lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vy  291 (338)
T KOG0265|consen  212 LSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVY  291 (338)
T ss_pred             eecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEE
Confidence            9999999999887  489999999999999999964    355778877643    2345566  888899999999999


Q ss_pred             EEeCCC
Q psy9182         461 VWNLVA  466 (486)
Q Consensus       461 iwdl~~  466 (486)
                      +||..+
T Consensus       292 vwd~~~  297 (338)
T KOG0265|consen  292 VWDTTS  297 (338)
T ss_pred             Eeeccc
Confidence            999875

>KOG0288|consensus

Probab=99.96  E-value=3.6e-29  Score=216.88  Aligned_cols=272  Identities=20%  Similarity=0.388  Sum_probs=218.5

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...+..+.|-++...|++|+.|..|++|+...++  .+.+|.|-.++|+.+.|.                       
T Consensus       172 d~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d-----------------------  228 (459)
T KOG0288|consen  172 DAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFD-----------------------  228 (459)
T ss_pred             hccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeec-----------------------
Confidence            3445555666666666778888888888888876555  556666666666666653                       


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                     ++++.+++++.|+.+++
T Consensus       229 ---------------------------------------------------------------~~~~~~iAas~d~~~r~  245 (459)
T KOG0288|consen  229 ---------------------------------------------------------------SDNKHVIAASNDKNLRL  245 (459)
T ss_pred             ---------------------------------------------------------------CCCceEEeecCCCceee
Confidence                                                                           35667888889999999


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcE
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI  336 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i  336 (486)
                      |++...+...++.+|.+.|+++.+  ....+++|+.|.+|+.||+....+.+++.. ...+.++...+..+++|..|+.|
T Consensus       246 Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~~~~~~SgH~Dkkv  324 (459)
T KOG0288|consen  246 WNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCSISDVISGHFDKKV  324 (459)
T ss_pred             eeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEecceeeeecccccce
Confidence            999999999999999999999999  334499999999999999999888877644 45566677777789999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC------CcccEEEEEeCCC
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG------HKRGIACLQYRDR  408 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~  408 (486)
                      ++||.++.....   .... .+.|+++..  ++..+.+++.|.++.+.|+++.+....+.+      |.-.-.++++++.
T Consensus       325 RfwD~Rs~~~~~---sv~~-gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~  400 (459)
T KOG0288|consen  325 RFWDIRSADKTR---SVPL-GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGS  400 (459)
T ss_pred             EEEeccCCceee---Eeec-CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCc
Confidence            999999887543   2222 347777776  899999999999999999999988887763      3333456666799


Q ss_pred             EEEEEeCCCcEEEEECCCCeeeEEecCcccC--eEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         409 LVVSGSSDNTIRLWDIECGACLRVLEGHEEL--VRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~--v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      |+++|+.||.|+||++.++++...+......  |++++|  .|..|++++.++.+.+|.
T Consensus       401 YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  401 YVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             eeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            9999999999999999999999988765554  999999  788899999999999993

>KOG0300|consensus

Probab=99.96  E-value=3.5e-28  Score=203.96  Aligned_cols=313  Identities=24%  Similarity=0.431  Sum_probs=234.8

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|+..|..++.......+.+++.|.+-+||.+++|+++.++.||.+.|+++.|++               .+.++++++.
T Consensus       146 GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~---------------s~~L~lTaSG  210 (481)
T KOG0300|consen  146 GHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHN---------------SGLLLLTASG  210 (481)
T ss_pred             ccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEecc---------------ccceEEEccC
Confidence            4566666666665566889999999999999999999999999999999999984               5566899999


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE--EecCC-eEEE
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS--GLRDN-TIKV  258 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~--~~~dg-~i~i  258 (486)
                      |++..||...-.-+.+........   ...             ....+...+           .....  -..|| +|+ 
T Consensus       211 D~taHIW~~av~~~vP~~~a~~~h---SsE-------------eE~e~sDe~-----------~~d~d~~~~sD~~tiR-  262 (481)
T KOG0300|consen  211 DETAHIWKAAVNWEVPSNNAPSDH---SSE-------------EEEEHSDEH-----------NRDTDSSEKSDGHTIR-  262 (481)
T ss_pred             CcchHHHHHhhcCcCCCCCCCCCC---Cch-------------hhhhccccc-----------ccccccccccCCceee-
Confidence            999999984221111111100000   000             000000000           00000  01122 232 


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCC
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDR  334 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg  334 (486)
                            .++..+.+|.+.|.+..|  .++.+++++.|.+-.+||+++++.+..+.+|....+.++-+|.  ++++.+.|.
T Consensus       263 ------vPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDt  336 (481)
T KOG0300|consen  263 ------VPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDT  336 (481)
T ss_pred             ------eeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCc
Confidence                  356788899999999999  7899999999999999999999999999999999998888775  788899999


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCce-EEEEEcCCcccEEEEEe--CCCEE
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE-FVRTLNGHKRGIACLQY--RDRLV  410 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~--~~~~l  410 (486)
                      +.++||++  +.+.....+.+|...|++..| .+..+++|+.|.+|++||+++.+ ++.++.. ..+++.+..  .+..+
T Consensus       337 TFRLWDFR--eaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iI  413 (481)
T KOG0300|consen  337 TFRLWDFR--EAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPII  413 (481)
T ss_pred             eeEeccch--hhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceE
Confidence            99999998  445666889999999999999 67789999999999999998854 4556553 344555555  45688


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEe-----cCcccCeEEEEe-cC---CEEEEEeCCCcEEEEeCCCC
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVL-----EGHEELVRCIRF-DA---KRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~-----~~h~~~v~~~~~-~~---~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +.--.+..|++||+. |..+..+     .+|..-|.|.+| +.   .-|+++|.|..+.=|++...
T Consensus       414 AiPhDNRqvRlfDln-G~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  414 AIPHDNRQVRLFDLN-GNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             EeccCCceEEEEecC-CCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence            888888999999998 4444433     589999999999 32   23899999999999998753

>KOG0266|consensus

Probab=99.96  E-value=2.4e-27  Score=227.68  Aligned_cols=234  Identities=31%  Similarity=0.594  Sum_probs=205.5

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEEC-CCCcEE
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDV-NTGEMV  307 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~-~~~~~~  307 (486)
                      .......++++|+.+++++.++.+++|+....+  ....+.+|...|.+++|  +++++++++.|++|++||+ ..+..+
T Consensus       160 ~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~  239 (456)
T KOG0266|consen  160 PSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNL  239 (456)
T ss_pred             CceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEE
Confidence            334445678899999999999999999997777  67777899999999999  8899999999999999999 556899


Q ss_pred             EEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEE
Q psy9182         308 NTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN  383 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd  383 (486)
                      +++.+|...|.+++|++  +++++|+.|+.|++||+++++..   ..+.+|...|++++|  +++++++++.|+.|++||
T Consensus       240 ~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~---~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd  316 (456)
T KOG0266|consen  240 KTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV---RKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWD  316 (456)
T ss_pred             EEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE---EeeeccCCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence            99999999999999986  49999999999999999996544   778899999999999  899999999999999999


Q ss_pred             CCCce--EEEEEcCCccc--EEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE---Ee--cCCEEEE
Q psy9182         384 TSSCE--FVRTLNGHKRG--IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RF--DAKRIVS  452 (486)
Q Consensus       384 ~~~~~--~~~~~~~~~~~--v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~---~~--~~~~l~s  452 (486)
                      +.++.  ++..+..+...  +.++.+  ++.++++++.|+.+++||+..+..+..+.+|...+.++   ..  .+.++++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s  396 (456)
T KOG0266|consen  317 LETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS  396 (456)
T ss_pred             CCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE
Confidence            99999  56777777665  777777  48999999999999999999999999999998765443   22  7889999


Q ss_pred             EeCCCcEEEEeCCCCCC
Q psy9182         453 GAYDGKIKVWNLVAALD  469 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~~~  469 (486)
                      |+.|+.|++||+.++..
T Consensus       397 g~~d~~v~~~~~~s~~~  413 (456)
T KOG0266|consen  397 GSEDGSVYVWDSSSGGI  413 (456)
T ss_pred             EeCCceEEEEeCCccch
Confidence            99999999999997543

>KOG0301|consensus

Probab=99.96  E-value=1.1e-27  Score=220.64  Aligned_cols=280  Identities=26%  Similarity=0.453  Sum_probs=227.5

Q ss_pred             cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccc
Q psy9182         137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN  216 (486)
Q Consensus       137 ~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (486)
                      ++.+.+.+|+..|..+++.                ++..++++|.||++++|+-..........                
T Consensus         5 ~ls~~l~gH~~DVr~v~~~----------------~~~~i~s~sRd~t~~vw~~~~~~~l~~~~----------------   52 (745)
T KOG0301|consen    5 KLSHELEGHKSDVRAVAVT----------------DGVCIISGSRDGTVKVWAKKGKQYLETHA----------------   52 (745)
T ss_pred             eeEEEeccCccchheeEec----------------CCeEEeecCCCCceeeeeccCccccccee----------------
Confidence            5667899999999888873                44568999999999999853322211100                


Q ss_pred             cccCceeEEEEeccCCCccceEEEE-eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCC
Q psy9182         217 WRMGKFLLQRINCRSENSKGVYCLQ-YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDS  294 (486)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg  294 (486)
                                +....+-.....|+. .++..+++|+.|+.|.+|...+..++..+++|...|.|++. ....+++|+.|.
T Consensus        53 ----------~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~  122 (745)
T KOG0301|consen   53 ----------FEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDS  122 (745)
T ss_pred             ----------cccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCceEeccccc
Confidence                      010111111113343 35667999999999999999999999999999999999997 334489999999


Q ss_pred             cEEEEECCCCcEEEEecccCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEE
Q psy9182         295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVS  372 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~  372 (486)
                      ++++|-.  +++...+.+|...|.++..-+ +.+++|+.|..|++|.-.  +   ..+.+.+|...|..+++ ++..+++
T Consensus       123 TakvW~~--~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~~--~---~l~tf~gHtD~VRgL~vl~~~~flS  195 (745)
T KOG0301|consen  123 TAKVWRI--GELVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKGG--T---LLKTFSGHTDCVRGLAVLDDSHFLS  195 (745)
T ss_pred             ceEEecc--hhhhcccCCcchheeeeeecCCCcEEeccCcceeeeccCC--c---hhhhhccchhheeeeEEecCCCeEe
Confidence            9999976  567777999999999888754 599999999999999752  2   33678899999999999 8889999


Q ss_pred             EeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCE
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKR  449 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~  449 (486)
                      ++.||.|++|++ +++.+.+..+|..-+.+++.  ++..++++++|++++||+..  ++.+.+......|+++.+ ...-
T Consensus       196 csNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD  272 (745)
T KOG0301|consen  196 CSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD  272 (745)
T ss_pred             ecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC
Confidence            999999999998 78999999999999999884  58899999999999999986  888888877778999998 6777


Q ss_pred             EEEEeCCCcEEEEeCCCCC
Q psy9182         450 IVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       450 l~s~~~dg~v~iwdl~~~~  468 (486)
                      +++|+.||.||||..+..+
T Consensus       273 Ivvg~SDG~VrVfT~~k~R  291 (745)
T KOG0301|consen  273 IVVGGSDGRVRVFTVDKDR  291 (745)
T ss_pred             EEEeccCceEEEEEecccc
Confidence            8899999999999987443

>KOG0294|consensus

Probab=99.96  E-value=2.1e-27  Score=199.14  Aligned_cols=241  Identities=21%  Similarity=0.398  Sum_probs=204.0

Q ss_pred             eEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecC----CEEEEEeCCCcEEE
Q psy9182         223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE----RVIISGSSDSTVRV  298 (486)
Q Consensus       223 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~v  298 (486)
                      .+..+.....|...+.+++-++.++++|+.|-+|+|||+.....+..+-.|.+.|+++.|..    +.|++|+.||.|.+
T Consensus        32 ~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   32 TLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             eeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            34445556678999999999999999999999999999999999999999999999999943    37999999999999


Q ss_pred             EECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      |+....+++..++.|...|+.++.+|.  +.++.+.|+.++.||+-.++.......  .+....  +.|  .|.+++.+.
T Consensus       112 w~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L--~~~at~--v~w~~~Gd~F~v~~  187 (362)
T KOG0294|consen  112 WRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL--KNKATL--VSWSPQGDHFVVSG  187 (362)
T ss_pred             EEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeecc--CCccee--eEEcCCCCEEEEEe
Confidence            999999999999999999999999864  777889999999999998875433221  233333  555  788888877


Q ss_pred             CCCcEEEEECCCceEEEEEcCCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe----cCCE
Q psy9182         375 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DAKR  449 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~----~~~~  449 (486)
                      .+ .|-+|.+.+......+... ..+.|+.| ++..|++|.+|+.|.+||..++.+...+.+|...|.++.+    ++.+
T Consensus       188 ~~-~i~i~q~d~A~v~~~i~~~-~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~  265 (362)
T KOG0294|consen  188 RN-KIDIYQLDNASVFREIENP-KRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEY  265 (362)
T ss_pred             cc-EEEEEecccHhHhhhhhcc-ccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceE
Confidence            64 6999999887766665543 55667776 5899999999999999999999999999999999999997    5579


Q ss_pred             EEEEeCCCcEEEEeCCCCCC
Q psy9182         450 IVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       450 l~s~~~dg~v~iwdl~~~~~  469 (486)
                      |+|+|.||.|++||++...+
T Consensus       266 lvTaSSDG~I~vWd~~~~~k  285 (362)
T KOG0294|consen  266 LVTASSDGFIKVWDIDMETK  285 (362)
T ss_pred             EEEeccCceEEEEEcccccc
Confidence            99999999999999998744

>KOG0643|consensus

Probab=99.96  E-value=4.5e-28  Score=198.53  Aligned_cols=276  Identities=20%  Similarity=0.351  Sum_probs=219.3

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|.+.++.+.++.+|.+|.+++.|.+..||-..+|+.+-++.||.+.|+|+..+                         
T Consensus         7 ~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did-------------------------   61 (327)
T KOG0643|consen    7 QGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDID-------------------------   61 (327)
T ss_pred             ccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEec-------------------------
Confidence            4588999999999999999999999999999999999999999999999998774                         


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                   .+.+++++|+.|.++++||
T Consensus        62 -------------------------------------------------------------~~s~~liTGSAD~t~kLWD   80 (327)
T KOG0643|consen   62 -------------------------------------------------------------WDSKHLITGSADQTAKLWD   80 (327)
T ss_pred             -------------------------------------------------------------CCcceeeeccccceeEEEE
Confidence                                                                         2345677778888888888


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-----CCcEEEEECC-------CCcEEEEecccCccEEEEEEcC--
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS-----DSTVRVWDVN-------TGEMVNTLIHHCEAVLHLRFSN--  324 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-----dg~i~vwd~~-------~~~~~~~~~~~~~~i~~~~~~~--  324 (486)
                      +++|+++..++ ...+|..+.|  +|++++....     .+.|.++|++       ..++...+..+...++.+-|.+  
T Consensus        81 v~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~  159 (327)
T KOG0643|consen   81 VETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG  159 (327)
T ss_pred             cCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccC
Confidence            88888887776 4456766666  6777766544     3679999998       4566778888889999999974  


Q ss_pred             CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182         325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       325 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~  402 (486)
                      ..+++|..||.|.+||++++....  .....|...|+.+.+  +..++++++.|.+-++||..+.+.++++.. ..+|++
T Consensus       160 ~~ii~Ghe~G~is~~da~~g~~~v--~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-e~PvN~  236 (327)
T KOG0643|consen  160 ETIIAGHEDGSISIYDARTGKELV--DSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-ERPVNT  236 (327)
T ss_pred             CEEEEecCCCcEEEEEcccCceee--echhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee-cccccc
Confidence            699999999999999999986543  555678889999998  889999999999999999999999988874 345655


Q ss_pred             EEeC--CCEEEE-EeCCC-cE------------EEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         403 LQYR--DRLVVS-GSSDN-TI------------RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       403 ~~~~--~~~l~~-~~~dg-~v------------~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      .++.  .+.++. |+.+- .|            ++|++-..+.+...++|-++|++++|  +|+..++|++||.|++.-+
T Consensus       237 aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~F  316 (327)
T KOG0643|consen  237 AAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHF  316 (327)
T ss_pred             eecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEe
Confidence            5553  333333 33321 12            22222223456677899999999999  9999999999999999877


Q ss_pred             CC
Q psy9182         465 VA  466 (486)
Q Consensus       465 ~~  466 (486)
                      +.
T Consensus       317 d~  318 (327)
T KOG0643|consen  317 DS  318 (327)
T ss_pred             cc
Confidence            64

>KOG0305|consensus

Probab=99.96  E-value=3.3e-27  Score=217.30  Aligned_cols=225  Identities=27%  Similarity=0.486  Sum_probs=196.8

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEE-ecccCccEE
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNT-LIHHCEAVL  318 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~i~  318 (486)
                      +++|.+|++|..+|.|.|||..+.+.+..+.+ |...|-+++|++..+.+|+.||.|..+|++..+.... +.+|...|+
T Consensus       226 s~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVC  305 (484)
T KOG0305|consen  226 SPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVC  305 (484)
T ss_pred             CCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceee
Confidence            35788899999999999999999999999988 9999999999999999999999999999998876555 888999999


Q ss_pred             EEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEe--CCCcEEEEECCCceEEE
Q psy9182         319 HLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSAS--GDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       319 ~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~--~d~~i~iwd~~~~~~~~  391 (486)
                      .+.|+++  ++++|+.|+.+.|||....+..   ..+..|...|.+++|   ....||+|+  .|+.|++||..+++.+.
T Consensus       306 gLkws~d~~~lASGgnDN~~~Iwd~~~~~p~---~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~  382 (484)
T KOG0305|consen  306 GLKWSPDGNQLASGGNDNVVFIWDGLSPEPK---FTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARID  382 (484)
T ss_pred             eeEECCCCCeeccCCCccceEeccCCCcccc---EEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEec
Confidence            9999865  9999999999999999665543   567789999999999   578899875  69999999999999888


Q ss_pred             EEcCCcccEEEEEeCCCE--EEE--EeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         392 TLNGHKRGIACLQYRDRL--VVS--GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~~~~--l~~--~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .+. -...|..+.|...+  |++  |..++.|.||+..+.+.+..+.+|...|..+++  ||..+++|+.|.++++|++-
T Consensus       383 ~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f  461 (484)
T KOG0305|consen  383 SVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLF  461 (484)
T ss_pred             ccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEecccc
Confidence            776 44678899996332  443  446789999999999999999999999999999  99999999999999999998


Q ss_pred             CCCC
Q psy9182         466 AALD  469 (486)
Q Consensus       466 ~~~~  469 (486)
                      ...+
T Consensus       462 ~~~~  465 (484)
T KOG0305|consen  462 DERP  465 (484)
T ss_pred             CCCC
Confidence            7643

>KOG0292|consensus

Probab=99.96  E-value=7.1e-28  Score=227.30  Aligned_cols=229  Identities=28%  Similarity=0.520  Sum_probs=204.3

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      .-++|+|....++++-.+|.|.+||.+-+.++..|..|.++|..+.|  .+.++++|+.|-.|++|+..+.+++.++.+|
T Consensus        13 KglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GH   92 (1202)
T KOG0292|consen   13 KGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGH   92 (1202)
T ss_pred             cceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccc
Confidence            34667888899999999999999999999999999999999999999  5789999999999999999999999999999


Q ss_pred             CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce-
Q psy9182         314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE-  388 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~-  388 (486)
                      -+.|..+.|+..  .+++++.|.+|+||+..+.+.+   ..+.+|...|.|..|  ....+++++-|.+|++||+...+ 
T Consensus        93 lDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~i---avltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRk  169 (1202)
T KOG0292|consen   93 LDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCI---AVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRK  169 (1202)
T ss_pred             cceeEEeeccCCCceEEEccCCCeEEEEeccCCceE---EEEecCceEEEeeccCCccceEEEecccceEEEEeecchhc
Confidence            999999999975  8999999999999999998766   677899999999999  46799999999999999975310 


Q ss_pred             ----------------------------EEEEEcCCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCCe--eeEEecCc
Q psy9182         389 ----------------------------FVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGA--CLRVLEGH  436 (486)
Q Consensus       389 ----------------------------~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~--~~~~~~~h  436 (486)
                                                  ..+.+++|..+|+..+|++  .++++|++|..|++|.+...+  .+-+..+|
T Consensus       170 k~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH  249 (1202)
T KOG0292|consen  170 KNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGH  249 (1202)
T ss_pred             cCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcc
Confidence                                        1245679999999999997  789999999999999987543  34567899


Q ss_pred             ccCeEEEEecC--CEEEEEeCCCcEEEEeCCCC
Q psy9182         437 EELVRCIRFDA--KRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       437 ~~~v~~~~~~~--~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ...|.++-|++  +.+++.|+|++|+|||+...
T Consensus       250 ~nnVssvlfhp~q~lIlSnsEDksirVwDm~kR  282 (1202)
T KOG0292|consen  250 YNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKR  282 (1202)
T ss_pred             cCCcceEEecCccceeEecCCCccEEEEecccc
Confidence            99999999966  78999999999999999843

>KOG1407|consensus

Probab=99.96  E-value=1.8e-26  Score=188.61  Aligned_cols=280  Identities=18%  Similarity=0.300  Sum_probs=223.2

Q ss_pred             eeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccccc
Q psy9182         140 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRM  219 (486)
Q Consensus       140 ~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (486)
                      +.+++|...|.+++|+               .+|..|++|+.|+++.+|+++...........                 
T Consensus        14 r~~~~~~~~v~Sv~wn---------------~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~-----------------   61 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWN---------------CDGTKLASGSFDKTVSVWNLERDRFRKELVYR-----------------   61 (313)
T ss_pred             HHhhhhhhcceEEEEc---------------ccCceeeecccCCceEEEEecchhhhhhhccc-----------------
Confidence            5677899999999997               68889999999999999998665322111111                 


Q ss_pred             CceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEE-EEecCCEEEEEeCCCcEEE
Q psy9182         220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC-LQYDERVIISGSSDSTVRV  298 (486)
Q Consensus       220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~i~v  298 (486)
                               .+......+.+...+...+++++.|.+|++||.+.+++...+....+.+.. .+++|+++++++.|..|..
T Consensus        62 ---------gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~  132 (313)
T KOG1407|consen   62 ---------GHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITF  132 (313)
T ss_pred             ---------CCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEE
Confidence                     011122333444447889999999999999999999999888766666543 3449999999999999999


Q ss_pred             EECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      .|.++.+.+...+. .-.+..+.|+  +++++.....|.|.|.....-+.   ...+..|...+.|+.|  +|+++|+|+
T Consensus       133 id~r~~~~~~~~~~-~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkp---v~si~AH~snCicI~f~p~GryfA~Gs  208 (313)
T KOG1407|consen  133 IDARTYKIVNEEQF-KFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKP---VQSIKAHPSNCICIEFDPDGRYFATGS  208 (313)
T ss_pred             EEecccceeehhcc-cceeeeeeecCCCCEEEEecCCceEEEEecccccc---ccccccCCcceEEEEECCCCceEeecc
Confidence            99999888776654 3345555554  55777777889999998775544   3667789999999998  899999999


Q ss_pred             CCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE--E
Q psy9182         375 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--I  450 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--l  450 (486)
                      .|..+.+||++..-+++.+..+.-+|..++|  +|++||+|++|..|-|=++++|..+..+. +.++...++|++++  |
T Consensus       209 ADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LL  287 (313)
T KOG1407|consen  209 ADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLL  287 (313)
T ss_pred             ccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCcee
Confidence            9999999999999999999999999999988  59999999999999999999999999987 77889999996654  6


Q ss_pred             EEEeCC---------CcEEEEeCC
Q psy9182         451 VSGAYD---------GKIKVWNLV  465 (486)
Q Consensus       451 ~s~~~d---------g~v~iwdl~  465 (486)
                      |-++.|         |.|++|-+.
T Consensus       288 AyA~ddk~~d~~reag~vKiFG~~  311 (313)
T KOG1407|consen  288 AYACDDKDGDSNREAGTVKIFGLS  311 (313)
T ss_pred             eEEecCCCCccccccceeEEecCC
Confidence            655543         567777654

>KOG0310|consensus

Probab=99.96  E-value=7e-27  Score=207.11  Aligned_cols=276  Identities=22%  Similarity=0.369  Sum_probs=225.7

Q ss_pred             cccccccCCccCcce-EEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         104 QRDFISLLPNFDEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~-l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ...|.++.|+|...+ +|+.+ .-.|.|++..+....+++.-.+..|.++.|                            
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~f----------------------------   76 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDF----------------------------   76 (487)
T ss_pred             cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEe----------------------------
Confidence            356788888885543 33333 347999999888877777666666666655                            


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                ..||+++++|...|.|+|||..
T Consensus        77 ----------------------------------------------------------R~DG~LlaaGD~sG~V~vfD~k   98 (487)
T KOG0310|consen   77 ----------------------------------------------------------RSDGRLLAAGDESGHVKVFDMK   98 (487)
T ss_pred             ----------------------------------------------------------ecCCeEEEccCCcCcEEEeccc
Confidence                                                                      2478889999999999999988


Q ss_pred             CceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcE
Q psy9182         263 SLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSI  336 (486)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i  336 (486)
                      +...++.+.+|..++..+.|   ++..+++|+.|+.+++||+.+......+.+|++.|.+.+++|.   .+++|+.||.|
T Consensus        99 ~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~v  178 (487)
T KOG0310|consen   99 SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKV  178 (487)
T ss_pred             cHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceE
Confidence            87788899999999988887   7889999999999999999999877789999999999999864   89999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEeC--CCEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYR--DRLVV  411 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~  411 (486)
                      ++||++.....   .....|..+|..+.+  .|..+++++. ..+++||+-+ ++.+.....|...|+|+.+.  +..|+
T Consensus       179 rl~DtR~~~~~---v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLl  254 (487)
T KOG0310|consen  179 RLWDTRSLTSR---VVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLL  254 (487)
T ss_pred             EEEEeccCCce---eEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEe
Confidence            99999987422   233468888888888  6788888866 5899999985 55566666699999999995  69999


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCC
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPR  471 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~  471 (486)
                      +|+-|+.|++||+.+.+.+..+. ..++|.+++.  ++..++.|..||.+.+=+...+.++.
T Consensus       255 S~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k~k~s  315 (487)
T KOG0310|consen  255 SGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVKKKPS  315 (487)
T ss_pred             ecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehhhcccCCC
Confidence            99999999999998888888876 5678999988  77889999999998887665555443

>KOG0278|consensus

Probab=99.96  E-value=3.4e-28  Score=197.32  Aligned_cols=282  Identities=21%  Similarity=0.406  Sum_probs=224.2

Q ss_pred             eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccc
Q psy9182         139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWR  218 (486)
Q Consensus       139 ~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (486)
                      -.+..+|..+|..++|++-.            +++..|++++.|+.-.+-+=+++.                      | 
T Consensus         7 pl~c~ghtrpvvdl~~s~it------------p~g~flisa~kd~~pmlr~g~tgd----------------------w-   51 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPIT------------PDGYFLISASKDGKPMLRNGDTGD----------------------W-   51 (334)
T ss_pred             ceEEcCCCcceeEEeccCCC------------CCceEEEEeccCCCchhccCCCCC----------------------c-
Confidence            45678999999999997521            678889999998875554322211                      1 


Q ss_pred             cCceeEEEEeccCCCccceEEEEe--CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182         219 MGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS  294 (486)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  294 (486)
                              +-...+|...+.....  +..+.++++.|-+-++||..+|..+..+. |..-|.+++|  |.++|++|+.+.
T Consensus        52 --------igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ek  122 (334)
T KOG0278|consen   52 --------IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEK  122 (334)
T ss_pred             --------EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHH
Confidence                    1112245666655544  44567888999999999999999998887 8888999999  788999999999


Q ss_pred             cEEEEECCCCc-EEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCE
Q psy9182         295 TVRVWDVNTGE-MVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       295 ~i~vwd~~~~~-~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~  369 (486)
                      .++|||++..+ +..++.+|.+.|..+.|.  +..+++.+.|+.|++||.+++.......    ....|+++..  +|++
T Consensus       123 llrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~----~~s~VtSlEvs~dG~i  198 (334)
T KOG0278|consen  123 LLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE----FNSPVTSLEVSQDGRI  198 (334)
T ss_pred             HhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe----cCCCCcceeeccCCCE
Confidence            99999997654 567788999999999886  4588888999999999999998765433    3556777776  6666


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcc-cEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--  445 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--  445 (486)
                      +.++ ..+.|.+||..+..+++.++.... .-.++.++...+++|++|..++.||..+|+.+..+ ++|.++|.|+.|  
T Consensus       199 lTia-~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSP  277 (334)
T KOG0278|consen  199 LTIA-YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSP  277 (334)
T ss_pred             EEEe-cCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECC
Confidence            6655 557899999999998888774332 23455566788999999999999999999999886 999999999999  


Q ss_pred             cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         446 DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ||...++||.||+|++|.+..+..
T Consensus       278 dGE~yAsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  278 DGELYASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             CCceeeccCCCceEEEEEecCCCc
Confidence            999999999999999999876643

>KOG0283|consensus

Probab=99.96  E-value=6.9e-27  Score=220.79  Aligned_cols=269  Identities=19%  Similarity=0.365  Sum_probs=201.6

Q ss_pred             eeeec-CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCC---------------
Q psy9182         139 VRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGG---------------  202 (486)
Q Consensus       139 ~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~---------------  202 (486)
                      .+.+. +|.+.|+++.|+               +||++||+|+.|+.|+||.+............               
T Consensus       259 ~Qe~~~ah~gaIw~mKFS---------------~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~  323 (712)
T KOG0283|consen  259 VQEISNAHKGAIWAMKFS---------------HDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIE  323 (712)
T ss_pred             eeccccccCCcEEEEEeC---------------CCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccC
Confidence            44556 899999999998               79999999999999999998652111000000               


Q ss_pred             ----CC-----C-----CCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCceee
Q psy9182         203 ----GG-----G-----PPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCI  267 (486)
Q Consensus       203 ----~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~  267 (486)
                          ..     .     .....+.....-....+....+....+|...|+.+++. .++|++++.|.+|++|++...+++
T Consensus       324 p~~s~~~~~~~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL  403 (712)
T KOG0283|consen  324 PSTSSEEKISSRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECL  403 (712)
T ss_pred             ccccccccccccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCccee
Confidence                00     0     00000011111111122223344456888999999994 678999999999999999999999


Q ss_pred             EEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECC
Q psy9182         268 KVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       268 ~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~  342 (486)
                      +.|. |...|+|++|   |.+++++|+.||.|+||++...+.+..... ..-|++++|.|+  ..++|+.+|.+++|+..
T Consensus       404 ~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-~~lITAvcy~PdGk~avIGt~~G~C~fY~t~  481 (712)
T KOG0283|consen  404 KVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-RDLITAVCYSPDGKGAVIGTFNGYCRFYDTE  481 (712)
T ss_pred             eEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhh-hhhheeEEeccCCceEEEEEeccEEEEEEcc
Confidence            9998 9999999999   789999999999999999987776655444 478999999865  89999999999999998


Q ss_pred             CCCceeeEEeee------cCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc----EEEEEeCCCE
Q psy9182         343 SPNEITLRRVLV------GHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG----IACLQYRDRL  409 (486)
Q Consensus       343 ~~~~~~~~~~~~------~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----v~~~~~~~~~  409 (486)
                      ..+.........      .|. .|+.+.+   +...+++.+.|..|+|+|.+..+++..|+++...    -..+..+|++
T Consensus       482 ~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~  560 (712)
T KOG0283|consen  482 GLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKH  560 (712)
T ss_pred             CCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCE
Confidence            766543333221      133 7999988   4456888889999999999998999999876543    2345558999


Q ss_pred             EEEEeCCCcEEEEECC
Q psy9182         410 VVSGSSDNTIRLWDIE  425 (486)
Q Consensus       410 l~~~~~dg~v~iwd~~  425 (486)
                      |+++++|..|++|+..
T Consensus       561 IVs~seDs~VYiW~~~  576 (712)
T KOG0283|consen  561 IVSASEDSWVYIWKND  576 (712)
T ss_pred             EEEeecCceEEEEeCC
Confidence            9999999999999974

>KOG0289|consensus

Probab=99.96  E-value=1.6e-26  Score=201.77  Aligned_cols=271  Identities=19%  Similarity=0.347  Sum_probs=224.4

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      .++.++...+....++||+.|..+.++|..+++.+.+|+||...|+++.|++               +.           
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~---------------~~-----------  273 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHK---------------DL-----------  273 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEecc---------------ch-----------
Confidence            5667777777778999999999999999999999999999999999998863               22           


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  264 (486)
                                                                                  ..+++++.|..|+||.....
T Consensus       274 ------------------------------------------------------------~~v~~aSad~~i~vws~~~~  293 (506)
T KOG0289|consen  274 ------------------------------------------------------------DTVITASADEIIRVWSVPLS  293 (506)
T ss_pred             ------------------------------------------------------------hheeecCCcceEEeeccccc
Confidence                                                                        23445555666666666555


Q ss_pred             eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc--CccEEEEEEcCC--eEEEEeCCCcEEE
Q psy9182         265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNG--MMVTCSKDRSIAV  338 (486)
Q Consensus       265 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~--~l~~~~~dg~i~i  338 (486)
                      ........|.++|+.+..  .|.||++++.||+..+.|++++..+......  .-.+++..|+|+  .+.+|..||.|++
T Consensus       294 s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki  373 (506)
T KOG0289|consen  294 SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI  373 (506)
T ss_pred             cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence            556666779999988877  7899999999999999999999988776553  345789999987  7778899999999


Q ss_pred             EECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-ccEEEEEeC--CCEEEEE
Q psy9182         339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYR--DRLVVSG  413 (486)
Q Consensus       339 ~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~--~~~l~~~  413 (486)
                      ||+.++...   ..+.+|.++|..++|  +|-+|++++.|+.|++||++..+...++.... .++.++.+|  |.+|+.+
T Consensus       374 wdlks~~~~---a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~  450 (506)
T KOG0289|consen  374 WDLKSQTNV---AKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA  450 (506)
T ss_pred             EEcCCcccc---ccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence            999988754   567789999999999  78899999999999999999988888776443 368888885  8999999


Q ss_pred             eCCCcEEEEEC--CCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         414 SSDNTIRLWDI--ECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       414 ~~dg~v~iwd~--~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      +.|=.|++++-  ++..++..+..|.+..+.+.|  +..+++++|.|..++++.+
T Consensus       451 g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  451 GSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             cceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            88777777763  357788888899999999999  6778999999999998865

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.96  E-value=1.1e-25  Score=205.55  Aligned_cols=226  Identities=39%  Similarity=0.675  Sum_probs=193.6

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      ++++++++++++.+|.+++|+..+++....+..|...+.++.+  +++.+++++.+|.|++||+.+++.+..+..+...+
T Consensus        17 ~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i   96 (289)
T cd00200          17 FSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYV   96 (289)
T ss_pred             EcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcE
Confidence            3456678888888999999999888888888889888888888  56799999999999999999988888888888899


Q ss_pred             EEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         318 LHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       318 ~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      .++.+.+  ..+++++.++.+.+||+.+.+..   ..+..|...+.++.+  ++.++++++.++.|++||+++++.+..+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~  173 (289)
T cd00200          97 SSVAFSPDGRILSSSSRDKTIKVWDVETGKCL---TTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL  173 (289)
T ss_pred             EEEEEcCCCCEEEEecCCCeEEEEECCCcEEE---EEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeE
Confidence            9999987  46666666999999999866543   344478888999999  4578888877999999999999999999


Q ss_pred             cCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         394 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       394 ~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ..|...+.++.++  ++.+++++.|+.|++||+++++.+..+..|...+.++.|  ++.++++++.||.|++||+..+.
T Consensus       174 ~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~  252 (289)
T cd00200         174 TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE  252 (289)
T ss_pred             ecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce
Confidence            9999899999986  458999999999999999999999999889999999999  55777777779999999998643

>KOG0299|consensus

Probab=99.95  E-value=2.1e-26  Score=202.58  Aligned_cols=294  Identities=26%  Similarity=0.449  Sum_probs=224.0

Q ss_pred             eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccc
Q psy9182         139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWR  218 (486)
Q Consensus       139 ~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (486)
                      ...+..|.-++.++++.               +++.+.++++.|++|.-|++.++......-.............     
T Consensus       135 ~~~~~~H~~s~~~vals---------------~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~-----  194 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALS---------------PDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPL-----  194 (479)
T ss_pred             ceeeccccCcceEEEee---------------ccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCC-----
Confidence            56677899999999997               6888999999999999999877664311110000000000000     


Q ss_pred             cCceeEEEEeccCCCcc--ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182         219 MGKFLLQRINCRSENSK--GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS  294 (486)
Q Consensus       219 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  294 (486)
                          ...+    ..|..  -.+++++|+++|++|+.|..|.||+..+.+.++.+.+|.+.|.+++|  ..+.+++++.|+
T Consensus       195 ----k~~r----~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr  266 (479)
T KOG0299|consen  195 ----KESR----KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR  266 (479)
T ss_pred             ----Cccc----ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC
Confidence                0000    12333  34567789999999999999999999999999999999999999999  457899999999


Q ss_pred             cEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEE
Q psy9182         295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIV  371 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~  371 (486)
                      .|++|++.....+.++.+|.+.|..+....  ..+-+|+.|+++++|++....    ...+.++...+-|+++ +...++
T Consensus       267 svkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees----qlifrg~~~sidcv~~In~~Hfv  342 (479)
T KOG0299|consen  267 SVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEES----QLIFRGGEGSIDCVAFINDEHFV  342 (479)
T ss_pred             ceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccc----eeeeeCCCCCeeeEEEeccccee
Confidence            999999999999999999999999998764  355566699999999994432    2456688889999999 999999


Q ss_pred             EEeCCCcEEEEECCCceEEEEEc-CCc-----------ccEEEEEe--CCCEEEEEeCCCcEEEEECCCC----eeeEEe
Q psy9182         372 SASGDRTIKVWNTSSCEFVRTLN-GHK-----------RGIACLQY--RDRLVVSGSSDNTIRLWDIECG----ACLRVL  433 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~~~-~~~-----------~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~----~~~~~~  433 (486)
                      +|+.+|.|.+|++.+.+++.+.+ +|.           ..|++++.  ..+++++|+.+|.|++|-+..+    .++..+
T Consensus       343 sGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~l  422 (479)
T KOG0299|consen  343 SGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSL  422 (479)
T ss_pred             eccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeec
Confidence            99999999999999988887765 222           15666665  4789999999999999999877    334444


Q ss_pred             cCcccCeEEEEe--cCCEEEEE-eCCCcEEEEeCC
Q psy9182         434 EGHEELVRCIRF--DAKRIVSG-AYDGKIKVWNLV  465 (486)
Q Consensus       434 ~~h~~~v~~~~~--~~~~l~s~-~~dg~v~iwdl~  465 (486)
                      . -.+.|++++|  +|++|++| +....+--|-..
T Consensus       423 s-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~  456 (479)
T KOG0299|consen  423 S-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCL  456 (479)
T ss_pred             c-cccEEEEEEEccCCCEEEEecccccccceeeEe
Confidence            4 5678999998  88865554 555555455543

>KOG1036|consensus

Probab=99.95  E-value=7.1e-26  Score=189.67  Aligned_cols=261  Identities=18%  Similarity=0.289  Sum_probs=206.9

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      +..|.++.|+|.+..|+.++.||+++++|....++...++ |..++.+++|.                            
T Consensus        13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~----------------------------   63 (323)
T KOG1036|consen   13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFA----------------------------   63 (323)
T ss_pred             hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeecc----------------------------
Confidence            4567888899999999999999999999998875544443 67788888883                            


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  263 (486)
                                                                                 +...+++|+.||.|+.+|+.+
T Consensus        64 -----------------------------------------------------------d~~~~~~G~~dg~vr~~Dln~   84 (323)
T KOG1036|consen   64 -----------------------------------------------------------DESTIVTGGLDGQVRRYDLNT   84 (323)
T ss_pred             -----------------------------------------------------------CCceEEEeccCceEEEEEecC
Confidence                                                                       233467788888888888877


Q ss_pred             ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEEC
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~  341 (486)
                      ++... +..|..+|.|+..  ....+++|+.|++|++||.+.......+.. ...|.++...++.|++|+.+..+.+||+
T Consensus        85 ~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~g~~LvVg~~~r~v~iyDL  162 (323)
T KOG1036|consen   85 GNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVSGNRLVVGTSDRKVLIYDL  162 (323)
T ss_pred             Cccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEeccCCEEEEeecCceEEEEEc
Confidence            76443 4459999999988  367899999999999999997555555544 4489999999999999999999999999


Q ss_pred             CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc----eEEEEEcCCcc---------cEEEEEeC
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC----EFVRTLNGHKR---------GIACLQYR  406 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~---------~v~~~~~~  406 (486)
                      ++...... .....-...+.+++.  ++.-.++++-||.|.+=.++..    +....|+.|..         +|.+++|+
T Consensus       163 Rn~~~~~q-~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fh  241 (323)
T KOG1036|consen  163 RNLDEPFQ-RRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFH  241 (323)
T ss_pred             ccccchhh-hccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEec
Confidence            98765431 222234455666666  6677888899999998766654    44456666653         67888887


Q ss_pred             C--CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182         407 D--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       407 ~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~  455 (486)
                      +  ..|++|+.||.|.+||+.+.+.+..+......|.+++|  ||..||+++.
T Consensus       242 p~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  242 PIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             cccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            4  57999999999999999999999999888888999999  9999999874

>KOG0268|consensus

Probab=99.95  E-value=1.1e-27  Score=204.40  Aligned_cols=276  Identities=18%  Similarity=0.314  Sum_probs=216.5

Q ss_pred             ccccccccccCCccCc-ceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ..|+..|.|++-+|.. ..+++|+.||.|+|||+.+.+++.++++|.+.|..+++..                 ..++++
T Consensus        63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-----------------~~~~tv  125 (433)
T KOG0268|consen   63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-----------------TSFFTV  125 (433)
T ss_pred             cccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-----------------cceEEe
Confidence            6788899999999887 7899999999999999999999999999999999999853                 458888


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEE--EeCCCEEEEEecCCeEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL--QYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~dg~i~  257 (486)
                      +.|.+|+.|.++....                             ..+.    ....+..+  ...+..+++++.  .|.
T Consensus       126 gdDKtvK~wk~~~~p~-----------------------------~til----g~s~~~gIdh~~~~~~FaTcGe--~i~  170 (433)
T KOG0268|consen  126 GDDKTVKQWKIDGPPL-----------------------------HTIL----GKSVYLGIDHHRKNSVFATCGE--QID  170 (433)
T ss_pred             cCCcceeeeeccCCcc-----------------------------eeee----ccccccccccccccccccccCc--eee
Confidence            8999999998744200                             0000    00111111  223455666655  599


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                      |||.....+++.+.-....|.++.++   ...|+++..|+.|.+||++++.+++.+.. ......++|+|.  .+++|.+
T Consensus       171 IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~E  249 (433)
T KOG0268|consen  171 IWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANE  249 (433)
T ss_pred             ecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-eccccceecCccccceeeccc
Confidence            99999889999988777889999994   46888888999999999999998877643 345567888875  7889999


Q ss_pred             CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC-CcccEEEEEe--CC
Q psy9182         333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQY--RD  407 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~--~~  407 (486)
                      |..++.||++.....  .....+|...|..++|  .|+-+++|+.|.+|+||..+.+.....+.. .-..|.|+.|  +.
T Consensus       250 D~nlY~~DmR~l~~p--~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Ds  327 (433)
T KOG0268|consen  250 DHNLYTYDMRNLSRP--LNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDS  327 (433)
T ss_pred             cccceehhhhhhccc--chhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccc
Confidence            999999999876543  3667799999999999  789999999999999999987654333221 2245788888  58


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeeE
Q psy9182         408 RLVVSGSSDNTIRLWDIECGACLR  431 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~~~~~~~  431 (486)
                      +++++||+|+.|++|.....+.+.
T Consensus       328 kyi~SGSdd~nvRlWka~Aseklg  351 (433)
T KOG0268|consen  328 KYIISGSDDGNVRLWKAKASEKLG  351 (433)
T ss_pred             cEEEecCCCcceeeeecchhhhcC
Confidence            999999999999999886554443

>KOG0647|consensus

Probab=99.95  E-value=6.6e-26  Score=189.14  Aligned_cols=264  Identities=20%  Similarity=0.332  Sum_probs=206.2

Q ss_pred             ccccccccccCCcc-CcceEEEeecCceeeeccccc-ccce-eeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         101 PMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSS-CEFV-RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~-~~~~-~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      +.-...|.++.||| ...++++|+.||+||+|+++. |..+ +....|.++|.+++|+                      
T Consensus        24 ~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Ws----------------------   81 (347)
T KOG0647|consen   24 NPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWS----------------------   81 (347)
T ss_pred             CCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEc----------------------
Confidence            33456788899999 455666899999999999986 3433 3445677788887774                      


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                                                                                      -+|..+++|+.|+.++
T Consensus        82 ----------------------------------------------------------------ddgskVf~g~~Dk~~k   97 (347)
T KOG0647|consen   82 ----------------------------------------------------------------DDGSKVFSGGCDKQAK   97 (347)
T ss_pred             ----------------------------------------------------------------cCCceEEeeccCCceE
Confidence                                                                            2566788889999999


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCC
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKD  333 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d  333 (486)
                      +||+.+++ +..+..|.++|.++.|    .-..|++|+.|.+|+.||.+...++.++.. .+.+.++.....+++++..+
T Consensus        98 ~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L-PeRvYa~Dv~~pm~vVata~  175 (347)
T KOG0647|consen   98 LWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL-PERVYAADVLYPMAVVATAE  175 (347)
T ss_pred             EEEccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec-cceeeehhccCceeEEEecC
Confidence            99999985 5556679999999999    224789999999999999999999888866 56788888888899999999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc--eEEEEEcCCcc---------cE
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC--EFVRTLNGHKR---------GI  400 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~---------~v  400 (486)
                      +.|.+|+++++..... .....-.-.+.+++.  +....+.|+-+|.+.+..+..+  +.-.+|+.|..         .|
T Consensus       176 r~i~vynL~n~~te~k-~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaV  254 (347)
T KOG0647|consen  176 RHIAVYNLENPPTEFK-RIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAV  254 (347)
T ss_pred             CcEEEEEcCCCcchhh-hhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEe
Confidence            9999999977643211 112223445566665  6666799999999999998876  44556666662         35


Q ss_pred             EEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEE
Q psy9182         401 ACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG  453 (486)
Q Consensus       401 ~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~  453 (486)
                      ..++|+  -..|++++.||+..+||-.....+...+.|..+|++..|  +|.+++-+
T Consensus       255 Nsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA  311 (347)
T KOG0647|consen  255 NSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA  311 (347)
T ss_pred             cceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence            677776  467999999999999999888888888999999999999  77776543

>KOG1539|consensus

Probab=99.95  E-value=1.2e-25  Score=211.21  Aligned_cols=351  Identities=16%  Similarity=0.248  Sum_probs=242.8

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCc-ceeecCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE-FQIVSSS  180 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~-~~l~s~s  180 (486)
                      .+...|+++..+|--+.+|.|..+|+|.|++++.++.+.+|+...+.|+.++|.               .|| ..+++++
T Consensus       200 ~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFr---------------tDG~p~las~~  264 (910)
T KOG1539|consen  200 EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFR---------------TDGNPLLASGR  264 (910)
T ss_pred             ccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEec---------------cCCCeeEEecc
Confidence            344678999999999999999999999999999999999999777999999995               233 3467788


Q ss_pred             CCCcceeeecccccccccCCCCC------CCCCCCCcccccccccCceeEEEEe----------ccCCCccceEEEEe--
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGG------GGPPPSGPSIENNWRMGKFLLQRIN----------CRSENSKGVYCLQY--  242 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~v~~~~~--  242 (486)
                      ..|.+.+||++............      ....+..+.....|.........++          .+.+|..+-.|+.+  
T Consensus       265 ~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~  344 (910)
T KOG1539|consen  265 SNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYG  344 (910)
T ss_pred             CCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeec
Confidence            88999999997765433222111      1111122222333333333333333          34455555556666  


Q ss_pred             -CCCEEEEEecCCeEEEEECCCceeeE---------------E---EcCCcccEEEEEec-------CCEEEEEeCCCcE
Q psy9182         243 -DDHKIVSGLRDNTIKVWDRVSLQCIK---------------V---LTGHTGSVLCLQYD-------ERVIISGSSDSTV  296 (486)
Q Consensus       243 -~~~~l~~~~~dg~i~i~d~~~~~~~~---------------~---~~~~~~~v~~~~~~-------~~~l~~~~~dg~i  296 (486)
                       ++..+.+++.|++++.+++.....-+               .   ....-.+|..+++.       .+.+++.-.+...
T Consensus       345 ~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~  424 (910)
T KOG1539|consen  345 SQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSA  424 (910)
T ss_pred             cCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceE
Confidence             34556666666666666543211000               0   00111234555541       2334444445566


Q ss_pred             EEEECCCCcE-EEEecc-----cCccEEEEE--EcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-
Q psy9182         297 RVWDVNTGEM-VNTLIH-----HCEAVLHLR--FSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-  367 (486)
Q Consensus       297 ~vwd~~~~~~-~~~~~~-----~~~~i~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-  367 (486)
                      +.|+.++... .+.+..     ....+++++  +.+++.+.|+..|.|-+|++.++-..........|..+|+.++.|+ 
T Consensus       425 ~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~  504 (910)
T KOG1539|consen  425 YTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGT  504 (910)
T ss_pred             EEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCC
Confidence            6677665443 222211     123444444  4588999999999999999998865443333468999999999964 


Q ss_pred             -CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEE
Q psy9182         368 -KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR  444 (486)
Q Consensus       368 -~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  444 (486)
                       +.+++++.+|.+.+||..+..++..++-. ..+.++..  ...+++.+..|-.|+++|..+.+.++.+.+|.+.|++++
T Consensus       505 n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~-~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~  583 (910)
T KOG1539|consen  505 NRLLVSAGADGILKFWDFKKKVLKKSLRLG-SSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMT  583 (910)
T ss_pred             CceEEEccCcceEEEEecCCcceeeeeccC-CCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeE
Confidence             67999999999999999998877777632 23444444  367889999999999999999999999999999999999


Q ss_pred             e--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         445 F--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       445 ~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      |  ||++|++++.|++|++||+.++.
T Consensus       584 FS~DgrWlisasmD~tIr~wDlpt~~  609 (910)
T KOG1539|consen  584 FSPDGRWLISASMDSTIRTWDLPTGT  609 (910)
T ss_pred             eCCCCcEEEEeecCCcEEEEeccCcc
Confidence            9  99999999999999999999875

>KOG0277|consensus

Probab=99.95  E-value=1.3e-26  Score=188.70  Aligned_cols=232  Identities=22%  Similarity=0.403  Sum_probs=190.3

Q ss_pred             cccccCCccCc-ceEEEeecCceeeeccccc-ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         106 DFISLLPNFDE-KYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       106 ~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~-~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      ....++++++. ..+++++.||+++|||+.. ..+++.++.|+.+|.++.|+.                           
T Consensus        62 ~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~---------------------------  114 (311)
T KOG0277|consen   62 GLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNT---------------------------  114 (311)
T ss_pred             ceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEecccc---------------------------
Confidence            34455555543 4788889999999999642 457888899999998887752                           


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  263 (486)
                                                                                ..+..+++++.|++|++|+...
T Consensus       115 ----------------------------------------------------------~~r~~~ltsSWD~TiKLW~~~r  136 (311)
T KOG0277|consen  115 ----------------------------------------------------------VRRRIFLTSSWDGTIKLWDPNR  136 (311)
T ss_pred             ----------------------------------------------------------ccceeEEeeccCCceEeecCCC
Confidence                                                                      1234567778888899998888


Q ss_pred             ceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc---CCeEEEEeCCCcEE
Q psy9182         264 LQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIA  337 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~  337 (486)
                      .+.+.++.+|...|....|   .++.+++++.||++++||++.......+..|...+.++.|+   ++.+++|+.|+.|+
T Consensus       137 ~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr  216 (311)
T KOG0277|consen  137 PNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVR  216 (311)
T ss_pred             CcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEE
Confidence            8888999999999999888   67999999999999999998654444488899999999987   46999999999999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC---CCEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR---DRLV  410 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~---~~~l  410 (486)
                      .||+++-+..  ...+.+|.-.|..+.+   ....|++++.|-+++|||...+ ..+.+...|..-+..+.|+   +.++
T Consensus       217 ~wDir~~r~p--l~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~v  294 (311)
T KOG0277|consen  217 GWDIRNLRTP--LFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQV  294 (311)
T ss_pred             EEehhhcccc--ceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCcee
Confidence            9999987643  4667899999999999   3568999999999999998854 4566677788888888884   8899


Q ss_pred             EEEeCCCcEEEEEC
Q psy9182         411 VSGSSDNTIRLWDI  424 (486)
Q Consensus       411 ~~~~~dg~v~iwd~  424 (486)
                      |+.+.|+.++||+.
T Consensus       295 As~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  295 ASTGWDELLYVWNP  308 (311)
T ss_pred             eecccccceeeecc
Confidence            99999999999984

>KOG1407|consensus

Probab=99.95  E-value=1.7e-25  Score=182.98  Aligned_cols=266  Identities=19%  Similarity=0.234  Sum_probs=218.6

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceee--ecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~--l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      .|...+.+++++.+|.+|++|+.|+++.+|++...+....  ..+|.+.|..++|++              .....++++
T Consensus        18 ~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~--------------~~~d~~ata   83 (313)
T KOG1407|consen   18 GHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDP--------------KHPDLFATA   83 (313)
T ss_pred             hhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCC--------------CCCcceEEe
Confidence            3445677889999999999999999999999988766554  468999999999976              466789999


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                      +.|.+|++||++..+......                              .....-..+++|+|+++++++.|..|...
T Consensus        84 s~dk~ir~wd~r~~k~~~~i~------------------------------~~~eni~i~wsp~g~~~~~~~kdD~it~i  133 (313)
T KOG1407|consen   84 SGDKTIRIWDIRSGKCTARIE------------------------------TKGENINITWSPDGEYIAVGNKDDRITFI  133 (313)
T ss_pred             cCCceEEEEEeccCcEEEEee------------------------------ccCcceEEEEcCCCCEEEEecCcccEEEE
Confidence            999999999986654332211                              12334456789999999999999999999


Q ss_pred             ECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCc
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRS  335 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~  335 (486)
                      |.++.+.+...+ ....+..+.|  ++++++.....|.|.|.....-+++..++.|.....|+.|+|.  ++++|+.|-.
T Consensus       134 d~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAl  212 (313)
T KOG1407|consen  134 DARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADAL  212 (313)
T ss_pred             Eecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccce
Confidence            999988776655 3345566666  6677777777899999999999999999999999999999875  9999999999


Q ss_pred             EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC--CEEE
Q psy9182         336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVV  411 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~  411 (486)
                      +.+||+...-   ..+.+..+.-+|..++|  +|++||+++.|..|-|=++++|..+..++ +.++...++|++  .+||
T Consensus       213 vSLWD~~ELi---C~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLA  288 (313)
T KOG1407|consen  213 VSLWDVDELI---CERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLA  288 (313)
T ss_pred             eeccChhHhh---hheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceee
Confidence            9999986543   44667778899999999  99999999999999999999999998887 677888899974  4566


Q ss_pred             EEeCC
Q psy9182         412 SGSSD  416 (486)
Q Consensus       412 ~~~~d  416 (486)
                      -++.|
T Consensus       289 yA~dd  293 (313)
T KOG1407|consen  289 YACDD  293 (313)
T ss_pred             EEecC
Confidence            66654

>KOG0308|consensus

Probab=99.95  E-value=1.7e-26  Score=211.21  Aligned_cols=265  Identities=24%  Similarity=0.445  Sum_probs=207.6

Q ss_pred             cCcceEEEeecCceeeeccccccc------ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCccee
Q psy9182         114 FDEKYIVSASGDRTIKVWNTSSCE------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILI  187 (486)
Q Consensus       114 ~~~~~l~tg~~dg~v~iWd~~~~~------~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~v  187 (486)
                      |.++||.||+.||.|++|+...-.      .+..++.|...|..+...+                               
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~-------------------------------   83 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCG-------------------------------   83 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhc-------------------------------
Confidence            467789999999999999985422      3667778887777665531                               


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc--e
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL--Q  265 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~--~  265 (486)
                                                                             +++.|++++.|-+|++|+...+  -
T Consensus        84 -------------------------------------------------------~~~tlIS~SsDtTVK~W~~~~~~~~  108 (735)
T KOG0308|consen   84 -------------------------------------------------------NGKTLISASSDTTVKVWNAHKDNTF  108 (735)
T ss_pred             -------------------------------------------------------CCCceEEecCCceEEEeecccCcch
Confidence                                                                   2334555555555555555544  4


Q ss_pred             eeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCc--EEEE--------ec-ccCccEEEEEEcCC--eEEE
Q psy9182         266 CIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGE--MVNT--------LI-HHCEAVLHLRFSNG--MMVT  329 (486)
Q Consensus       266 ~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~--~~~~--------~~-~~~~~i~~~~~~~~--~l~~  329 (486)
                      ++.++..|...|.|+++   +...+++|+.|+.|.+||++++.  .+..        +. ++...|.+++.++.  .++.
T Consensus       109 c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivs  188 (735)
T KOG0308|consen  109 CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVS  188 (735)
T ss_pred             hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEe
Confidence            56677789999999888   67789999999999999998772  2222        22 67788999999876  8899


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD  407 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  407 (486)
                      |+.++.+++||.++.+.+   ..+.+|...|.++-.  ||..+++++.||+|++||+...+++.++..|...|.++..+.
T Consensus       189 Ggtek~lr~wDprt~~ki---mkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~  265 (735)
T KOG0308|consen  189 GGTEKDLRLWDPRTCKKI---MKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSP  265 (735)
T ss_pred             cCcccceEEeccccccce---eeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCC
Confidence            999999999999998766   345599999999888  899999999999999999999999999999999999988875


Q ss_pred             --CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         408 --RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       408 --~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                        ..+.+|+.||.|..=|+++......+-....+|..+..  +.+-+-++..|+.|+-|.+...
T Consensus       266 sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~  329 (735)
T KOG0308|consen  266 SFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPD  329 (735)
T ss_pred             CcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccc
Confidence              56999999999999999885443344345567777777  3555677888999999987653

>PTZ00421 coronin; Provisional

Probab=99.94  E-value=4.4e-24  Score=204.19  Aligned_cols=219  Identities=20%  Similarity=0.290  Sum_probs=153.3

Q ss_pred             CCEEEEEecCCeEEEEECCCc-------eeeEEEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSL-------QCIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +++|++|+.||+|++||+.++       +.+..+.+|...|.++.|+   +++|++|+.|+.|++||+++++.+..+..|
T Consensus        88 ~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h  167 (493)
T PTZ00421         88 PQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH  167 (493)
T ss_pred             CCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC
Confidence            344455555555555554332       3456788999999999993   368999999999999999999999999999


Q ss_pred             CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccE-EEEEe--CCCEEEEEe----CCCcEEEEEC
Q psy9182         314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV-NVVDF--DEKYIVSAS----GDRTIKVWNT  384 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~~~~--~~~~l~~~~----~d~~i~iwd~  384 (486)
                      ...|.+++|+++  .+++++.|+.|++||+++++..   ....+|.... ..+.|  ++..+++++    .|+.|++||+
T Consensus       168 ~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v---~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDl  244 (493)
T PTZ00421        168 SDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIV---SSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDT  244 (493)
T ss_pred             CCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEE---EEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeC
Confidence            999999999854  8999999999999999988754   3445665433 23444  556666554    4789999999


Q ss_pred             CCce-EEEEEcCCcc-cEEEEEe--CCCEEEEEe-CCCcEEEEECCCCeeeEEecC-cccCeEEEEecCCEEEEEeCCCc
Q psy9182         385 SSCE-FVRTLNGHKR-GIACLQY--RDRLVVSGS-SDNTIRLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGK  458 (486)
Q Consensus       385 ~~~~-~~~~~~~~~~-~v~~~~~--~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~  458 (486)
                      ++.. ++.....+.. .+....+  ++++|++++ .|+.|++||+.+++.+..... +..++..++|..++-+=...--.
T Consensus       245 r~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~~dv~~~Ei  324 (493)
T PTZ00421        245 RKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWSLDTRKCEI  324 (493)
T ss_pred             CCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccccccccceee
Confidence            8754 3444443333 3333334  578888877 599999999999887766543 44567778775554333333333


Q ss_pred             EEEEeCC
Q psy9182         459 IKVWNLV  465 (486)
Q Consensus       459 v~iwdl~  465 (486)
                      .|+|.+.
T Consensus       325 ~r~~~l~  331 (493)
T PTZ00421        325 ARFYALT  331 (493)
T ss_pred             eEEEEec
Confidence            4555554

>KOG0640|consensus

Probab=99.94  E-value=5.1e-26  Score=190.41  Aligned_cols=283  Identities=18%  Similarity=0.339  Sum_probs=216.1

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccc------------c------cceeeecCcccceeEEEeecceeEec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS------------C------EFVRTLNGHKRGIACLQYRDRLVVSG  162 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~------------~------~~~~~l~~h~~~V~~~~~~~~~~~~~  162 (486)
                      ..|+..+.+..|++||.++|||+.|-+|+|.|++-            |      -.+++|-.|..+|+++.|+|      
T Consensus       109 t~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP------  182 (430)
T KOG0640|consen  109 TSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP------  182 (430)
T ss_pred             eecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc------
Confidence            45777888999999999999999999999999761            1      25788999999999999984      


Q ss_pred             CCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe
Q psy9182         163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY  242 (486)
Q Consensus       163 ~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  242 (486)
                               ....|++++.|++|+++|+.........+.                           ....+....++++|
T Consensus       183 ---------re~ILiS~srD~tvKlFDfsK~saKrA~K~---------------------------~qd~~~vrsiSfHP  226 (430)
T KOG0640|consen  183 ---------RETILISGSRDNTVKLFDFSKTSAKRAFKV---------------------------FQDTEPVRSISFHP  226 (430)
T ss_pred             ---------hhheEEeccCCCeEEEEecccHHHHHHHHH---------------------------hhccceeeeEeecC
Confidence                     556699999999999999865432211100                           01134455667788


Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEE---cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-cc-Cc
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVL---TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HH-CE  315 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~-~~  315 (486)
                      .|.++++|....++++||+.+.++...-   ..|.+.|+++.+  .+++.++|+.||.|++||--+++++.++. .| ..
T Consensus       227 sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gs  306 (430)
T KOG0640|consen  227 SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGS  306 (430)
T ss_pred             CCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCc
Confidence            9999999999999999999998887554   368899999998  68999999999999999999999988874 33 45


Q ss_pred             cEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeee--cCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCce
Q psy9182         316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLV--GHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSCE  388 (486)
Q Consensus       316 ~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~  388 (486)
                      .|++..|..  .++++.+.|..+++|.+.+++.+....-..  +...--+...|  ...|++.-. ..+.+.-||.++..
T Consensus       307 evcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtad  386 (430)
T KOG0640|consen  307 EVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTAD  386 (430)
T ss_pred             eeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchh
Confidence            688888874  499999999999999999988664322110  11111122233  345555443 45678899999887


Q ss_pred             EEEEEc-CCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         389 FVRTLN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       389 ~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      .+..+. +|.+.+.++..+  +.-+++++.|...++|--+
T Consensus       387 r~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  387 RVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             hhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence            766665 789999888775  6778999999999999643

>PTZ00420 coronin; Provisional

Probab=99.94  E-value=3.1e-24  Score=206.04  Aligned_cols=214  Identities=17%  Similarity=0.291  Sum_probs=170.6

Q ss_pred             EecCCeEEEEECCCceeeEEEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCc--------EEEEecccCccEE
Q psy9182         250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGE--------MVNTLIHHCEAVL  318 (486)
Q Consensus       250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~--------~~~~~~~~~~~i~  318 (486)
                      |+.++.|++|+......+..+.+|.+.|.+++|+   +++|++|+.||.|++||+.++.        ++..+.+|...|.
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~  129 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS  129 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence            6678899999988888888999999999999993   6799999999999999997642        3446778999999


Q ss_pred             EEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         319 HLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       319 ~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      +++|+|.   .+++++.|+.|++||+++++....   + .+...|.++.|  +|.+|++++.|+.|++||+++++.+..+
T Consensus       130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~---i-~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl  205 (568)
T PTZ00420        130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQ---I-NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF  205 (568)
T ss_pred             EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEE---E-ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence            9999974   467899999999999998865422   2 24567889988  7999999999999999999999999999


Q ss_pred             cCCcccEEEEE-------eCCCEEEEEeCCC----cEEEEECCC-CeeeEEecCc--ccCeEEEEe--cCCEEEEEeCCC
Q psy9182         394 NGHKRGIACLQ-------YRDRLVVSGSSDN----TIRLWDIEC-GACLRVLEGH--EELVRCIRF--DAKRIVSGAYDG  457 (486)
Q Consensus       394 ~~~~~~v~~~~-------~~~~~l~~~~~dg----~v~iwd~~~-~~~~~~~~~h--~~~v~~~~~--~~~~l~s~~~dg  457 (486)
                      .+|.+.+.+..       .++.+|++++.|+    .|+|||+++ ++++..+..+  .+.+.....  ++.++++|+.|+
T Consensus       206 ~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~  285 (568)
T PTZ00420        206 HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDG  285 (568)
T ss_pred             ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCC
Confidence            99987653221       3567888887764    799999985 5666555432  222222222  577899999999


Q ss_pred             cEEEEeCCCC
Q psy9182         458 KIKVWNLVAA  467 (486)
Q Consensus       458 ~v~iwdl~~~  467 (486)
                      .|++|++..+
T Consensus       286 tIr~~e~~~~  295 (568)
T PTZ00420        286 NCRYYQHSLG  295 (568)
T ss_pred             eEEEEEccCC
Confidence            9999999765

>KOG0772|consensus

Probab=99.94  E-value=2.9e-25  Score=197.93  Aligned_cols=289  Identities=20%  Similarity=0.317  Sum_probs=221.8

Q ss_pred             ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccc
Q psy9182         136 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIEN  215 (486)
Q Consensus       136 ~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (486)
                      +.....+++|...|.++++.               +.|..|++|+.|-+|++||+.......                  
T Consensus       157 ~shEi~l~hgtk~Vsal~~D---------------p~GaR~~sGs~Dy~v~~wDf~gMdas~------------------  203 (641)
T KOG0772|consen  157 GSHEIQLKHGTKIVSALAVD---------------PSGARFVSGSLDYTVKFWDFQGMDASM------------------  203 (641)
T ss_pred             ccceEeccCCceEEEEeeec---------------CCCceeeeccccceEEEEecccccccc------------------
Confidence            33455678999999999997               678889999999999999985432111                  


Q ss_pred             ccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEE------------EcCCcccEEEEEe-
Q psy9182         216 NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV------------LTGHTGSVLCLQY-  282 (486)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~------------~~~~~~~v~~~~~-  282 (486)
                            ...+.+.....|....+.+++.+..|++.+.....+++|....+....            .++|...++|.+| 
T Consensus       204 ------~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~wh  277 (641)
T KOG0772|consen  204 ------RSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWH  277 (641)
T ss_pred             ------hhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccc
Confidence                  112233334467778888899999999998899999999766554433            3578889999999 


Q ss_pred             --cCCEEEEEeCCCcEEEEECCCCcE-EEEe-----cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         283 --DERVIISGSSDSTVRVWDVNTGEM-VNTL-----IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       283 --~~~~l~~~~~dg~i~vwd~~~~~~-~~~~-----~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                        +...+++++.||++++||+...+. ...+     .+..-.++..+|+++  .+++|+.||.|.+|+..+.........
T Consensus       278 P~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~v  357 (641)
T KOG0772|consen  278 PDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKV  357 (641)
T ss_pred             cCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEe
Confidence              457899999999999999976543 2222     223446788889864  899999999999999866544444455


Q ss_pred             eecCcc--cEEEEEe--CCCEEEEEeCCCcEEEEECCCce-EEEEEcCC----cccEEEEEeCCCEEEEEeC------CC
Q psy9182         353 LVGHRA--AVNVVDF--DEKYIVSASGDRTIKVWNTSSCE-FVRTLNGH----KRGIACLQYRDRLVVSGSS------DN  417 (486)
Q Consensus       353 ~~~~~~--~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~----~~~v~~~~~~~~~l~~~~~------dg  417 (486)
                      ...|..  .|+++.|  +|++|++-+.|+++++||++..+ ++....+-    ...-.|++++.++|++|+.      .|
T Consensus       358 k~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g  437 (641)
T KOG0772|consen  358 KDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAG  437 (641)
T ss_pred             eeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCc
Confidence            567766  8999999  99999999999999999999854 44443332    2334677778899999874      57


Q ss_pred             cEEEEECCCCeeeEEecCcccCeEEEEecCC--EEEEEeCCCcEEEEe
Q psy9182         418 TIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVWN  463 (486)
Q Consensus       418 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~l~s~~~dg~v~iwd  463 (486)
                      .+.+||..+-+.+..+.-....|..+.|+++  .|+.|+.||++++|=
T Consensus       438 ~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  438 TLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             eEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence            8999999999999999888888999999765  488889999999864

>KOG0283|consensus

Probab=99.94  E-value=5.8e-26  Score=214.56  Aligned_cols=241  Identities=20%  Similarity=0.320  Sum_probs=185.9

Q ss_pred             hhhcccccccccccCCccCcceEEEeecCceeeecccccc----------------------------------------
Q psy9182          97 TYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----------------------------------------  136 (486)
Q Consensus        97 ~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----------------------------------------  136 (486)
                      +.++..|...|.++-||+||+|||+|+.||.|+||.+...                                        
T Consensus       260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~  339 (712)
T KOG0283|consen  260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS  339 (712)
T ss_pred             eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence            4455589999999999999999999999999999987650                                        


Q ss_pred             --------------------cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccccc
Q psy9182         137 --------------------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET  196 (486)
Q Consensus       137 --------------------~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~  196 (486)
                                          ++++.|.||.+.|..++|+                ..++|++++.|.+|++|++....+.
T Consensus       340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS----------------Kn~fLLSSSMDKTVRLWh~~~~~CL  403 (712)
T KOG0283|consen  340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWS----------------KNNFLLSSSMDKTVRLWHPGRKECL  403 (712)
T ss_pred             ccccCCccccCCCccccccccchhhhhccchhheecccc----------------cCCeeEeccccccEEeecCCCccee
Confidence                                1334566788888888884                6678999999999999998654433


Q ss_pred             ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---CCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182         197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY---DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                      ...                                .|..-|.|+.+   |.+++++|+-||.|+||++...+.+.-...+
T Consensus       404 ~~F--------------------------------~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~  451 (712)
T KOG0283|consen  404 KVF--------------------------------SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR  451 (712)
T ss_pred             eEE--------------------------------ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhh
Confidence            221                                36666777666   7899999999999999999988877655544


Q ss_pred             cccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc--------cCccEEEEEEcC---CeEEEEeCCCcEEEEE
Q psy9182         274 TGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH--------HCEAVLHLRFSN---GMMVTCSKDRSIAVWD  340 (486)
Q Consensus       274 ~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------~~~~i~~~~~~~---~~l~~~~~dg~i~i~d  340 (486)
                       .-|+++++  ||+..++|+.+|.+++|+....+......-        ....|+.+.|.+   +.+++.+.|..|+|||
T Consensus       452 -~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d  530 (712)
T KOG0283|consen  452 -DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYD  530 (712)
T ss_pred             -hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEe
Confidence             67888887  999999999999999999987776554421        123799999874   4799999999999999


Q ss_pred             CCCCCceeeEEeeecCcccEE-EEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         341 MVSPNEITLRRVLVGHRAAVN-VVDFDEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      .+....+..++-+......+. ++..||++|++++.|..|++|+...
T Consensus       531 ~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  531 GRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             ccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence            977665533332222222222 2333999999999999999999744

>KOG0268|consensus

Probab=99.94  E-value=2.1e-26  Score=196.63  Aligned_cols=279  Identities=20%  Similarity=0.415  Sum_probs=213.8

Q ss_pred             ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccc
Q psy9182         138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW  217 (486)
Q Consensus       138 ~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (486)
                      .+..|.||..+|.|++-+++.+.              .+++|+.||.|++||+.+..+....                  
T Consensus        58 Fv~~L~gHrdGV~~lakhp~~ls--------------~~aSGs~DG~VkiWnlsqR~~~~~f------------------  105 (433)
T KOG0268|consen   58 FVGSLDGHRDGVSCLAKHPNKLS--------------TVASGSCDGEVKIWNLSQRECIRTF------------------  105 (433)
T ss_pred             chhhccccccccchhhcCcchhh--------------hhhccccCceEEEEehhhhhhhhee------------------
Confidence            34556789999999998865433              5899999999999999765433222                  


Q ss_pred             ccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCc
Q psy9182         218 RMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDST  295 (486)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~  295 (486)
                                .   .|...|..+..+...+++++.|.+|+.|.+.. .++.++.+ ...+..+.-  .++.+++++.  .
T Consensus       106 ----------~---AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~  168 (433)
T KOG0268|consen  106 ----------K---AHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--Q  168 (433)
T ss_pred             ----------e---cccCceeeEEecccceEEecCCcceeeeeccC-Ccceeeec-cccccccccccccccccccCc--e
Confidence                      1   23344444555558899999999999998765 35555543 234455544  4667777775  4


Q ss_pred             EEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE
Q psy9182         296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI  370 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l  370 (486)
                      |.|||.....++..+.-..+.|.++.|+|.   .|++++.|+.|.+||++....+...  ...  ..-+.++|  .+-.+
T Consensus       169 i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KV--i~~--mRTN~IswnPeafnF  244 (433)
T KOG0268|consen  169 IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKV--ILT--MRTNTICWNPEAFNF  244 (433)
T ss_pred             eeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCcccee--eee--ccccceecCccccce
Confidence            999999999999999888899999999974   7888889999999999998766422  222  23345566  45578


Q ss_pred             EEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEec-CcccCeEEEEe-
Q psy9182         371 VSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF-  445 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~-  445 (486)
                      ++++.|..++.||++.. .++....+|.+.|..+.++  |+-+++|+.|.+|+||..+.+..--... .-...|.++.| 
T Consensus       245 ~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S  324 (433)
T KOG0268|consen  245 VAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYS  324 (433)
T ss_pred             eeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEe
Confidence            88999999999999874 5677888999999999996  8999999999999999998765433221 12346899999 


Q ss_pred             -cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         446 -DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       446 -~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                       |.+++++||.|+.|++|.-....+
T Consensus       325 ~Dskyi~SGSdd~nvRlWka~Asek  349 (433)
T KOG0268|consen  325 MDSKYIISGSDDGNVRLWKAKASEK  349 (433)
T ss_pred             ccccEEEecCCCcceeeeecchhhh
Confidence             999999999999999999876654

>KOG0301|consensus

Probab=99.94  E-value=3.1e-25  Score=204.57  Aligned_cols=269  Identities=27%  Similarity=0.472  Sum_probs=215.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccce--eeecCcccceeE-EEeecceeEecCCCCceeccCcceee
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV--RTLNGHKRGIAC-LQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~--~~l~~h~~~V~~-~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      ..|..|+..++.. ++..+++++.||++++|+-..++.+  ..+.+|.+-|.+ ++|.+              .++..++
T Consensus        11 ~gH~~DVr~v~~~-~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e--------------~~~~~l~   75 (745)
T KOG0301|consen   11 EGHKSDVRAVAVT-DGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAE--------------SDKGRLV   75 (745)
T ss_pred             ccCccchheeEec-CCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceecc--------------ccCcceE
Confidence            3566677666655 4458999999999999998766654  356778777766 66642              2555689


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTI  256 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i  256 (486)
                      +|+.|..+.+|...+....                               ....+|...|+|++. ....+++|+.|.++
T Consensus        76 ~g~~D~~i~v~~~~~~~P~-------------------------------~~LkgH~snVC~ls~~~~~~~iSgSWD~Ta  124 (745)
T KOG0301|consen   76 VGGMDTTIIVFKLSQAEPL-------------------------------YTLKGHKSNVCSLSIGEDGTLISGSWDSTA  124 (745)
T ss_pred             eecccceEEEEecCCCCch-------------------------------hhhhccccceeeeecCCcCceEecccccce
Confidence            9999999999997553322                               223478888999985 33448999999999


Q ss_pred             EEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEEeCCC
Q psy9182         257 KVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTCSKDR  334 (486)
Q Consensus       257 ~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~~dg  334 (486)
                      ++|-  .+++...+.+|...|.++.. ..+.+++|+.|.+|++|.-  ++.++++.+|.+.|..+++-++ .+++++.||
T Consensus       125 kvW~--~~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg  200 (745)
T KOG0301|consen  125 KVWR--IGELVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDG  200 (745)
T ss_pred             EEec--chhhhcccCCcchheeeeeecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCc
Confidence            9995  56677779999999999877 5569999999999999985  7889999999999999999776 999999999


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe-CCCEEE
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVV  411 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~  411 (486)
                      .|+.|++ +++.+   ....+|..-+.+++.  ++..+++++.|+++++|+..  ++.+.+.-....+.+... ...-++
T Consensus       201 ~Ir~w~~-~ge~l---~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIv  274 (745)
T KOG0301|consen  201 SIRLWDL-DGEVL---LEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIV  274 (745)
T ss_pred             eEEEEec-cCcee---eeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEE
Confidence            9999999 44433   566799999999984  88999999999999999976  777777766666766655 355578


Q ss_pred             EEeCCCcEEEEECC
Q psy9182         412 SGSSDNTIRLWDIE  425 (486)
Q Consensus       412 ~~~~dg~v~iwd~~  425 (486)
                      +|++||.||||...
T Consensus       275 vg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  275 VGGSDGRVRVFTVD  288 (745)
T ss_pred             EeccCceEEEEEec
Confidence            89999999999875

>KOG0294|consensus

Probab=99.94  E-value=3.6e-24  Score=179.84  Aligned_cols=273  Identities=19%  Similarity=0.316  Sum_probs=204.2

Q ss_pred             eEEEeecCceeeecccccc------------cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         118 YIVSASGDRTIKVWNTSSC------------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       118 ~l~tg~~dg~v~iWd~~~~------------~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .|++|+....|.=+++...            ..+..+..|.+.|++++.++                 .++++|+.|.+|
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~-----------------~~~aSGssDetI   65 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSG-----------------PYVASGSSDETI   65 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecc-----------------eeEeccCCCCcE
Confidence            4677777777766665321            12556788999999999854                 467888888899


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCC----EEEEEecCCeEEEEEC
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH----KIVSGLRDNTIKVWDR  261 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~l~~~~~dg~i~i~d~  261 (486)
                      ++||+....+...                               .-.|...+.++.+...    .|++|+.||.|.+|+.
T Consensus        66 ~IYDm~k~~qlg~-------------------------------ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~  114 (362)
T KOG0294|consen   66 HIYDMRKRKQLGI-------------------------------LLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRV  114 (362)
T ss_pred             EEEeccchhhhcc-------------------------------eeccccceEEEEecCCcchhheeeecCCCcEEEEEc
Confidence            9999865433221                               1135566677766433    6999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEE
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIA  337 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~  337 (486)
                      ...+++..+++|.+.|+.++.  .+++.++.+.|+.++.||+-+|+.-..+.-. .....+.|++  ++++++..+ .|-
T Consensus       115 ~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~-~~at~v~w~~~Gd~F~v~~~~-~i~  192 (362)
T KOG0294|consen  115 GSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK-NKATLVSWSPQGDHFVVSGRN-KID  192 (362)
T ss_pred             CCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC-CcceeeEEcCCCCEEEEEecc-EEE
Confidence            999999999999999998887  6889999999999999999988765544332 2223377764  467776654 688


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe----CCCEEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY----RDRLVVS  412 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~  412 (486)
                      +|.+.+.......    .....+.++.| ++..+++|..|+.|.+||..+..+...+.+|...|-.+.+    .+.+|++
T Consensus       193 i~q~d~A~v~~~i----~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvT  268 (362)
T KOG0294|consen  193 IYQLDNASVFREI----ENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVT  268 (362)
T ss_pred             EEecccHhHhhhh----hccccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEE
Confidence            9988776543211    12355777888 8999999999999999999999999999999999998885    2579999


Q ss_pred             EeCCCcEEEEECCCC-----eeeEEecCcccCeEEEEe
Q psy9182         413 GSSDNTIRLWDIECG-----ACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       413 ~~~dg~v~iwd~~~~-----~~~~~~~~h~~~v~~~~~  445 (486)
                      ++.||.|+|||++..     +++..+.. ...++|+..
T Consensus       269 aSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~  305 (362)
T KOG0294|consen  269 ASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV  305 (362)
T ss_pred             eccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence            999999999999765     34444432 334455443

>KOG0264|consensus

Probab=99.94  E-value=1.2e-24  Score=191.49  Aligned_cols=237  Identities=20%  Similarity=0.389  Sum_probs=195.3

Q ss_pred             cCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce----------eeEEEcCCcccEEEEEe---cCCEEEEEeCCCcE
Q psy9182         230 RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ----------CIKVLTGHTGSVLCLQY---DERVIISGSSDSTV  296 (486)
Q Consensus       230 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i  296 (486)
                      +.+....+..+..+...+++++..+.|.|||..+-.          +-..+.+|...-.+++|   ....+++++.|+.|
T Consensus       123 h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i  202 (422)
T KOG0264|consen  123 HDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTI  202 (422)
T ss_pred             CCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCcE
Confidence            444455556666688899999999999999975422          22367889887788888   45689999999999


Q ss_pred             EEEECCCCc-------EEEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-
Q psy9182         297 RVWDVNTGE-------MVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-  365 (486)
Q Consensus       297 ~vwd~~~~~-------~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-  365 (486)
                      ++||+....       ....+.+|...|..++|++   +++++++.|+.+.|||++++ .........+|...+.|++| 
T Consensus       203 ~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~~~vn~~~fn  281 (422)
T KOG0264|consen  203 CLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHSAEVNCVAFN  281 (422)
T ss_pred             EEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccccccCCceeEEEeC
Confidence            999997543       3456788999999999974   58999999999999999974 33445667789999999999 


Q ss_pred             --CCCEEEEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCC-------------
Q psy9182         366 --DEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC-------------  426 (486)
Q Consensus       366 --~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~-------------  426 (486)
                        ++..||+|+.|++|.+||+++. +++.++.+|...|.++.|+   ...||+++.|+.+.|||+..             
T Consensus       282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dg  361 (422)
T KOG0264|consen  282 PFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDG  361 (422)
T ss_pred             CCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccC
Confidence              6789999999999999999984 5688999999999999996   57899999999999999953             


Q ss_pred             -CeeeEEecCcccCeEEEEec---CCEEEEEeCCCcEEEEeCCCC
Q psy9182         427 -GACLRVLEGHEELVRCIRFD---AKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       427 -~~~~~~~~~h~~~v~~~~~~---~~~l~s~~~dg~v~iwdl~~~  467 (486)
                       .+++..-.||...|..+.|+   +-.+++++.|+.+.||+....
T Consensus       362 ppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~  406 (422)
T KOG0264|consen  362 PPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN  406 (422)
T ss_pred             CcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence             12346667999999999994   445999999999999998743

>PTZ00421 coronin; Provisional

Probab=99.94  E-value=6.9e-24  Score=202.85  Aligned_cols=226  Identities=17%  Similarity=0.351  Sum_probs=170.7

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCc----------eee---EEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCC
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSL----------QCI---KVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~----------~~~---~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      .++++..+++++.+.....|+...+          +..   ..+.+|.+.|.+++|   ++++|++|+.||+|++||+.+
T Consensus        28 ~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~  107 (493)
T PTZ00421         28 ALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPE  107 (493)
T ss_pred             ccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCC
Confidence            3445444555555555555553332          211   246789999999998   467999999999999999976


Q ss_pred             C-------cEEEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE
Q psy9182         304 G-------EMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV  371 (486)
Q Consensus       304 ~-------~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~  371 (486)
                      +       +.+..+.+|...|.+++|++   +.|++++.|+.|++||+.+++..   ..+.+|...|.++.|  ++.+|+
T Consensus       108 ~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~---~~l~~h~~~V~sla~spdG~lLa  184 (493)
T PTZ00421        108 EGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAV---EVIKCHSDQITSLEWNLDGSLLC  184 (493)
T ss_pred             CccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEE---EEEcCCCCceEEEEEECCCCEEE
Confidence            5       35677889999999999986   38999999999999999987643   456678899999998  789999


Q ss_pred             EEeCCCcEEEEECCCceEEEEEcCCcccE-EEEEe--CCCEEEEEe----CCCcEEEEECCCCe-eeEEecCccc-CeEE
Q psy9182         372 SASGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQY--RDRLVVSGS----SDNTIRLWDIECGA-CLRVLEGHEE-LVRC  442 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~--~~~~l~~~~----~dg~v~iwd~~~~~-~~~~~~~h~~-~v~~  442 (486)
                      +++.|+.|++||+++++.+..+.+|.+.. ..+.|  ++..+++++    .|+.|++||+++.. ++.....+.. .+..
T Consensus       185 tgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~  264 (493)
T PTZ00421        185 TTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFI  264 (493)
T ss_pred             EecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEE
Confidence            99999999999999999999999987653 33444  345666544    47999999998754 4444443433 3444


Q ss_pred             EEe--cCCEEEEEe-CCCcEEEEeCCCCC
Q psy9182         443 IRF--DAKRIVSGA-YDGKIKVWNLVAAL  468 (486)
Q Consensus       443 ~~~--~~~~l~s~~-~dg~v~iwdl~~~~  468 (486)
                      ..|  ++++|++++ .||.|++||+..+.
T Consensus       265 ~~~d~d~~~L~lggkgDg~Iriwdl~~~~  293 (493)
T PTZ00421        265 PFFDEDTNLLYIGSKGEGNIRCFELMNER  293 (493)
T ss_pred             EEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence            445  788888887 59999999998754

>KOG0293|consensus

Probab=99.94  E-value=5.3e-26  Score=197.23  Aligned_cols=238  Identities=20%  Similarity=0.427  Sum_probs=194.1

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ..|...|..+.+|||.++|++|+.|..+.+||+.+|.+...+. +|...+.+++|.               ||+..+++|
T Consensus       266 vgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~---------------pDg~~~V~G  330 (519)
T KOG0293|consen  266 VGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWC---------------PDGFRFVTG  330 (519)
T ss_pred             ecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEc---------------cCCceeEec
Confidence            3456778889999999999999999999999999999988875 567888999997               799999999


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                      +.|+++..||++...                   ...|+.-          .......+++++||+++++.+.|..|++|
T Consensus       331 s~dr~i~~wdlDgn~-------------------~~~W~gv----------r~~~v~dlait~Dgk~vl~v~~d~~i~l~  381 (519)
T KOG0293|consen  331 SPDRTIIMWDLDGNI-------------------LGNWEGV----------RDPKVHDLAITYDGKYVLLVTVDKKIRLY  381 (519)
T ss_pred             CCCCcEEEecCCcch-------------------hhccccc----------ccceeEEEEEcCCCcEEEEEecccceeee
Confidence            999999999985422                   2223211          12334456777899999999999999999


Q ss_pred             ECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc--EEEEEEc---CCeEEEEeC
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA--VLHLRFS---NGMMVTCSK  332 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--i~~~~~~---~~~l~~~~~  332 (486)
                      +.++......+. ...+|++++.  +++++++--.+..+++||++....+..+.+|...  +..-+|.   ..++++|++
T Consensus       382 ~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSE  460 (519)
T KOG0293|consen  382 NREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSE  460 (519)
T ss_pred             chhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCC
Confidence            988776665444 3457877777  8899999999999999999988888888887654  3333443   248999999


Q ss_pred             CCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCC
Q psy9182         333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      |+.|+||+..+++.+   ..+.||...|++++|   +...+|+++.||+|+||-...
T Consensus       461 D~kvyIWhr~sgkll---~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  461 DSKVYIWHRISGKLL---AVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             CceEEEEEccCCcee---EeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            999999999998755   778899999999999   567899999999999998654

>KOG0299|consensus

Probab=99.94  E-value=9.3e-25  Score=192.28  Aligned_cols=248  Identities=27%  Similarity=0.467  Sum_probs=202.0

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeE----E---E-----------cCCcccEEEEEe--cCCEEEEEeC
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK----V---L-----------TGHTGSVLCLQY--DERVIISGSS  292 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----~---~-----------~~~~~~v~~~~~--~~~~l~~~~~  292 (486)
                      .+...+++++++++.++++.+|+|.-|++.+++...    .   +           ++|...+.+++.  |+++|++|+.
T Consensus       143 ~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatgg~  222 (479)
T KOG0299|consen  143 LSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATGGR  222 (479)
T ss_pred             CcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEecCC
Confidence            444556677899999999999999999988776331    1   0           257777877766  9999999999


Q ss_pred             CCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCC
Q psy9182         293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK  368 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~  368 (486)
                      |..|.|||.++.+.++.+.+|.+.|.+++|-  .+.+++++.|+.|++|++.....+   ..+.+|...|..+..  -++
T Consensus       223 d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v---etlyGHqd~v~~IdaL~reR  299 (479)
T KOG0299|consen  223 DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV---ETLYGHQDGVLGIDALSRER  299 (479)
T ss_pred             CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH---HHHhCCccceeeechhcccc
Confidence            9999999999999999999999999999997  459999999999999999776544   567799999999988  455


Q ss_pred             EEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEec-Cc----------
Q psy9182         369 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLE-GH----------  436 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~h----------  436 (486)
                      .+-+|+.|+++++|++.. +....+.++.+.+-|+++ +...+++|+.+|.|.+|++.+.+++.+.. +|          
T Consensus       300 ~vtVGgrDrT~rlwKi~e-esqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~  378 (479)
T KOG0299|consen  300 CVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVN  378 (479)
T ss_pred             eEEeccccceeEEEeccc-cceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccc
Confidence            566666999999999943 445567788989999988 78899999999999999999888887653 22          


Q ss_pred             -ccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCCCCccccceeeeee
Q psy9182         437 -EELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVV  484 (486)
Q Consensus       437 -~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~~~~~~~~~~~~~~  484 (486)
                       ...|++++.  ..+++++|+.+|.|++|.+..+..+-.+.....+..++.
T Consensus       379 ~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVN  429 (479)
T KOG0299|consen  379 GNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVN  429 (479)
T ss_pred             cccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEE
Confidence             127888888  788999999999999999998866555444444444444

>KOG0308|consensus

Probab=99.94  E-value=1.3e-25  Score=205.57  Aligned_cols=226  Identities=26%  Similarity=0.473  Sum_probs=194.4

Q ss_pred             eCCCEEEEEecCCeEEEEECCCce------eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC--cEEEEec
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQ------CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG--EMVNTLI  311 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~  311 (486)
                      +++++|++|+.||.|++|+.....      ....++.|...|..+..  +++.|++++.|-+|++|+...+  -++.++.
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir  114 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR  114 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence            467789999999999999875432      35677889999988766  7889999999999999999877  5777889


Q ss_pred             ccCccEEEEEE-c--CCeEEEEeCCCcEEEEECCCCCc--------eeeEEeeecCcccEEEEEeC--CCEEEEEeCCCc
Q psy9182         312 HHCEAVLHLRF-S--NGMMVTCSKDRSIAVWDMVSPNE--------ITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRT  378 (486)
Q Consensus       312 ~~~~~i~~~~~-~--~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~  378 (486)
                      .|.+.|.|+++ .  ...+++|+-|+.|.+||+.++..        ........++...|.+++.+  |..+++|+..+.
T Consensus       115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~  194 (735)
T KOG0308|consen  115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD  194 (735)
T ss_pred             cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence            99999999999 3  34899999999999999997632        11112223788899999984  458999999999


Q ss_pred             EEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecC--CEEEEEe
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGA  454 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~~  454 (486)
                      |++||.++++.+..+.+|...|.++-.  +|..+++++.||+|++||+...+++.++..|...|+++..+.  ..+.+|+
T Consensus       195 lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~  274 (735)
T KOG0308|consen  195 LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGG  274 (735)
T ss_pred             eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecC
Confidence            999999999999999999999999887  489999999999999999999999999999999999999944  5599999


Q ss_pred             CCCcEEEEeCCCC
Q psy9182         455 YDGKIKVWNLVAA  467 (486)
Q Consensus       455 ~dg~v~iwdl~~~  467 (486)
                      .||.|..=|+++.
T Consensus       275 rd~~i~~Tdl~n~  287 (735)
T KOG0308|consen  275 RDGNIYRTDLRNP  287 (735)
T ss_pred             CCCcEEecccCCc
Confidence            9999999999874

>KOG0646|consensus

Probab=99.94  E-value=8.8e-25  Score=192.83  Aligned_cols=297  Identities=21%  Similarity=0.329  Sum_probs=216.7

Q ss_pred             EEeecC-ceeeecccccccceeeecCcc-cceeEEEeecceeEecCCCCceeccCcceeecCC-CCCcceeeeccccccc
Q psy9182         120 VSASGD-RTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS-HDDTILIWDFLNYSET  196 (486)
Q Consensus       120 ~tg~~d-g~v~iWd~~~~~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s-~dg~i~vWd~~~~~~~  196 (486)
                      .+++.| .++.+||+.||....++++-. ..-..+..                -.+.+++++. ....+.+|.+......
T Consensus        11 sssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~----------------l~~~yllsaq~~rp~l~vw~i~k~~~~   74 (476)
T KOG0646|consen   11 SSSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTA----------------LNNEYLLSAQLKRPLLHVWEILKKDQV   74 (476)
T ss_pred             eccCCCCcceeEEecCCCceeEEecCcccccchhhhh----------------hchhheeeecccCccccccccCchhhh
Confidence            334445 459999999999888877541 11111111                1223333333 3446888987443322


Q ss_pred             ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCccc
Q psy9182         197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS  276 (486)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  276 (486)
                      ..                             .+.-......+..+++|.+++.|+..|.|++|.+.+|..+..+.+|-..
T Consensus        75 ~q-----------------------------~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~  125 (476)
T KOG0646|consen   75 VQ-----------------------------YIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQS  125 (476)
T ss_pred             hh-----------------------------hcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccc
Confidence            10                             0011122334445568889999989999999999999999999999999


Q ss_pred             EEEEEe--cCCEEEEEeCCCcEEEEECC---------CCcEEEEecccCccEEEEEEcCC----eEEEEeCCCcEEEEEC
Q psy9182         277 VLCLQY--DERVIISGSSDSTVRVWDVN---------TGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDM  341 (486)
Q Consensus       277 v~~~~~--~~~~l~~~~~dg~i~vwd~~---------~~~~~~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~  341 (486)
                      |+|+.|  |+.++++|+.||.|.+|++.         +-++.+.+..|.-+|+++....+    .+++++.|.++++||+
T Consensus       126 ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdl  205 (476)
T KOG0646|consen  126 ITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDL  205 (476)
T ss_pred             eeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEe
Confidence            999999  88999999999999999863         34678889999999999998643    9999999999999999


Q ss_pred             CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc----------------eEEEEEcCCcc--cEE
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC----------------EFVRTLNGHKR--GIA  401 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~----------------~~~~~~~~~~~--~v~  401 (486)
                      ..+..+....    ....+.++..  .++.+++|+.+|.|.+.++.+.                ..+..+.+|.+  .|+
T Consensus       206 S~g~LLlti~----fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~IT  281 (476)
T KOG0646|consen  206 SLGVLLLTIT----FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAIT  281 (476)
T ss_pred             ccceeeEEEe----cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCccee
Confidence            9986553222    3456666666  5789999999999999886542                24556778888  899


Q ss_pred             EEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCC
Q psy9182         402 CLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       402 ~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~  465 (486)
                      |++.  +|.+|++|+.||.|+|||+.+.++++++....++|+.+.+   ....+..-...-.+-.|++.
T Consensus       282 cLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~lk  350 (476)
T KOG0646|consen  282 CLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPHLK  350 (476)
T ss_pred             EEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccccceecccccCccCCchHhh
Confidence            8887  6999999999999999999999999998877888998888   33333333333344445443

>KOG0310|consensus

Probab=99.93  E-value=2.6e-24  Score=190.94  Aligned_cols=234  Identities=23%  Similarity=0.400  Sum_probs=192.4

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ++..+.++.|-.||+++|+|+..|.|+|+|..+...++.+.+|+.+|..+.|++                          
T Consensus        67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~--------------------------  120 (487)
T KOG0310|consen   67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSP--------------------------  120 (487)
T ss_pred             hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecc--------------------------
Confidence            566788889999999999999999999999888778999999999999988863                          


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                 .++..+++|+.|+.+++||+.
T Consensus       121 -----------------------------------------------------------~d~t~l~s~sDd~v~k~~d~s  141 (487)
T KOG0310|consen  121 -----------------------------------------------------------QDNTMLVSGSDDKVVKYWDLS  141 (487)
T ss_pred             -----------------------------------------------------------cCCeEEEecCCCceEEEEEcC
Confidence                                                                       144557777788888888888


Q ss_pred             CceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcCC-eEEEEeCCCcEE
Q psy9182         263 SLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSNG-MMVTCSKDRSIA  337 (486)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~~-~l~~~~~dg~i~  337 (486)
                      +......+.+|...|.|.++   ++..+++|+.||.|++||++.. ..+.++ .|..+|..+.+-|+ .+++......|+
T Consensus       142 ~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgGn~vk  220 (487)
T KOG0310|consen  142 TAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGGNSVK  220 (487)
T ss_pred             CcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCCCeEE
Confidence            87776688999999999998   5679999999999999999987 445454 56888988888654 555555567899


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSG  413 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  413 (486)
                      +||+.++....  .....|...|+|+.+  ++..|++++-|+.+++||+.+.+.+..+. -.++|.+++.  ++..++.|
T Consensus       221 VWDl~~G~qll--~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viG  297 (487)
T KOG0310|consen  221 VWDLTTGGQLL--TSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIG  297 (487)
T ss_pred             EEEecCCceeh--hhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEe
Confidence            99999776442  334459999999999  67999999999999999999999888877 4566766665  46899999


Q ss_pred             eCCCcEEEEECC
Q psy9182         414 SSDNTIRLWDIE  425 (486)
Q Consensus       414 ~~dg~v~iwd~~  425 (486)
                      ..||.+-+-+..
T Consensus       298 msnGlv~~rr~~  309 (487)
T KOG0310|consen  298 MSNGLVSIRRRE  309 (487)
T ss_pred             cccceeeeehhh
Confidence            999998877543

>KOG0973|consensus

Probab=99.93  E-value=3e-24  Score=208.24  Aligned_cols=294  Identities=18%  Similarity=0.333  Sum_probs=234.1

Q ss_pred             cccccCCccCcceEEEee--cCceeeeccccc------------ccceeeecCcccceeEEEeecceeEecCCCCceecc
Q psy9182         106 DFISLLPNFDEKYIVSAS--GDRTIKVWNTSS------------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR  171 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~--~dg~v~iWd~~~------------~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~  171 (486)
                      .|.++..+|||..+|||+  .||.++||+.+.            .+.+.+...|.+.|.|+.|+               +
T Consensus        15 ~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S---------------~   79 (942)
T KOG0973|consen   15 SIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFS---------------P   79 (942)
T ss_pred             eEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEEC---------------C
Confidence            378889999999999999  999999998642            23466778899999999998               6


Q ss_pred             CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe
Q psy9182         172 DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL  251 (486)
Q Consensus       172 ~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  251 (486)
                      |+.+||+|+.|+.|.+|.... .                                                 +..=+.|+
T Consensus        80 dG~~lAsGSDD~~v~iW~~~~-~-------------------------------------------------~~~~~fgs  109 (942)
T KOG0973|consen   80 DGSYLASGSDDRLVMIWERAE-I-------------------------------------------------GSGTVFGS  109 (942)
T ss_pred             CCCeEeeccCcceEEEeeecc-c-------------------------------------------------CCcccccc
Confidence            999999999999999999532 0                                                 00001111


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeE
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMM  327 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l  327 (486)
                      ..|   .-+.+..++...+.+|.+.|..+.|  ++.++++++.|++|.+||.++.+.+..+.+|...|..+.|+|  .++
T Consensus       110 ~g~---~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~  186 (942)
T KOG0973|consen  110 TGG---AKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYF  186 (942)
T ss_pred             ccc---ccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCee
Confidence            111   1234566788889999999999999  689999999999999999999999999999999999999986  599


Q ss_pred             EEEeCCCcEEEEECCCCCceeeEEee---ecCcccEEEEEe--CCCEEEEEeC----CCcEEEEECCCceEEEEEcCCcc
Q psy9182         328 VTCSKDRSIAVWDMVSPNEITLRRVL---VGHRAAVNVVDF--DEKYIVSASG----DRTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       328 ~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      ++-+.|++|++|++.+-.........   .........++|  ||.+|++...    -..+.|.+-.+.+.-..+-+|..
T Consensus       187 ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~  266 (942)
T KOG0973|consen  187 ASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSA  266 (942)
T ss_pred             eeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCC
Confidence            99999999999997653322211111   122334555666  9999998753    34688999888888899999999


Q ss_pred             cEEEEEeC-------CC------------EEEEEeCCCcEEEEECCCCeeeEEec-CcccCeEEEEe--cCCEEEEEeCC
Q psy9182         399 GIACLQYR-------DR------------LVVSGSSDNTIRLWDIECGACLRVLE-GHEELVRCIRF--DAKRIVSGAYD  456 (486)
Q Consensus       399 ~v~~~~~~-------~~------------~l~~~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~--~~~~l~s~~~d  456 (486)
                      ++.++.|+       ..            .+|+|+.|++|-||.....+++.... -....|.+++|  ||..|+.+|.|
T Consensus       267 p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~D  346 (942)
T KOG0973|consen  267 PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLD  346 (942)
T ss_pred             ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecC
Confidence            99999984       12            68899999999999998888776543 23568999999  89999999999


Q ss_pred             CcEEEEeCCCC
Q psy9182         457 GKIKVWNLVAA  467 (486)
Q Consensus       457 g~v~iwdl~~~  467 (486)
                      |+|.+..++..
T Consensus       347 GtV~~i~Fee~  357 (942)
T KOG0973|consen  347 GTVALIHFEEK  357 (942)
T ss_pred             CeEEEEEcchH
Confidence            99999999875

>KOG0641|consensus

Probab=99.93  E-value=2e-22  Score=161.56  Aligned_cols=292  Identities=18%  Similarity=0.276  Sum_probs=214.3

Q ss_pred             cccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeE
Q psy9182         145 HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLL  224 (486)
Q Consensus       145 h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (486)
                      ....|.+++|+               |.+.+.+.|+...++++-.+.............              ......+
T Consensus        31 dsqairav~fh---------------p~g~lyavgsnskt~ric~yp~l~~~r~~hea~--------------~~pp~v~   81 (350)
T KOG0641|consen   31 DSQAIRAVAFH---------------PAGGLYAVGSNSKTFRICAYPALIDLRHAHEAA--------------KQPPSVL   81 (350)
T ss_pred             chhheeeEEec---------------CCCceEEeccCCceEEEEccccccCcccccccc--------------cCCCeEE
Confidence            34588999998               566777888888888877643211110000000              0011122


Q ss_pred             EEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCcee-----eEEEcCCcccEEEEEe-c-----CCEEEEEe-C
Q psy9182         225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC-----IKVLTGHTGSVLCLQY-D-----ERVIISGS-S  292 (486)
Q Consensus       225 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~v~~~~~-~-----~~~l~~~~-~  292 (486)
                      ...+.++.......|++++|+++++|+.|.+|++.-.....+     -..+.-|.+.|..++| +     +..|++++ .
T Consensus        82 ~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag  161 (350)
T KOG0641|consen   82 CKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG  161 (350)
T ss_pred             eeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC
Confidence            222333334455566788999999999999999976544332     2456679999999999 2     35666655 3


Q ss_pred             CCcEEEEECCCCcEEEEecccCccEEEE-EEcCCeEEEEeCCCcEEEEECCCCCceeeEEee-ec---CcccEEEEEe--
Q psy9182         293 DSTVRVWDVNTGEMVNTLIHHCEAVLHL-RFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL-VG---HRAAVNVVDF--  365 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~---~~~~v~~~~~--  365 (486)
                      |..|++-|..+|+..+.+.+|.+.|.++ .|++-++++|+.|.+|++||++-+..+...... .+   ....|.+++.  
T Consensus       162 dc~iy~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp  241 (350)
T KOG0641|consen  162 DCKIYITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP  241 (350)
T ss_pred             cceEEEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence            6778888999999999999999999887 467779999999999999999877654322211 11   2355666666  


Q ss_pred             CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCC----eeeEEecCcccC
Q psy9182         366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG----ACLRVLEGHEEL  439 (486)
Q Consensus       366 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~h~~~  439 (486)
                      .|++|++|-.|....+||++.++.++.+..|...|.|+.|+  ..++++++.|..|++-|++..    -++.....|.+.
T Consensus       242 sgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk  321 (350)
T KOG0641|consen  242 SGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDK  321 (350)
T ss_pred             CcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCc
Confidence            78999999999999999999999999999999999999996  578999999999999998731    233455678888


Q ss_pred             eEEEEecC--CEEEEEeCCCcEEEEeCC
Q psy9182         440 VRCIRFDA--KRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       440 v~~~~~~~--~~l~s~~~dg~v~iwdl~  465 (486)
                      +..+.|+.  -.+++.+.|.++.+|-+.
T Consensus       322 ~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  322 AIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             eEEEEecCccceeeeccCcceEEEeccC
Confidence            88999933  348899999999999874

>PTZ00420 coronin; Provisional

Probab=99.93  E-value=3.5e-23  Score=198.79  Aligned_cols=246  Identities=18%  Similarity=0.247  Sum_probs=175.2

Q ss_pred             eecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCC
Q psy9182         122 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGG  201 (486)
Q Consensus       122 g~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~  201 (486)
                      |+.+|.|++|+......+..+.+|.+.|.+++|++              .++..|++|+.|++|++||+.+....     
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP--------------~~~~lLASgS~DgtIrIWDi~t~~~~-----  110 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNP--------------CFSEILASGSEDLTIRVWEIPHNDES-----  110 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcC--------------CCCCEEEEEeCCCeEEEEECCCCCcc-----
Confidence            67789999999888778889999999999999973              12556777777777778876321000     


Q ss_pred             CCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE
Q psy9182         202 GGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ  281 (486)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~  281 (486)
                                                                   ..             .....+..+.+|...|.+++
T Consensus       111 ---------------------------------------------~~-------------~i~~p~~~L~gH~~~V~sVa  132 (568)
T PTZ00420        111 ---------------------------------------------VK-------------EIKDPQCILKGHKKKISIID  132 (568)
T ss_pred             ---------------------------------------------cc-------------ccccceEEeecCCCcEEEEE
Confidence                                                         00             00022345677999999999


Q ss_pred             ec--CC-EEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecC
Q psy9182         282 YD--ER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH  356 (486)
Q Consensus       282 ~~--~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  356 (486)
                      |+  +. .+++++.|+.|++||+++++.+..+. +...|.+++|++  .++++++.|+.|++||+++++..   ..+.+|
T Consensus       133 f~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i---~tl~gH  208 (568)
T PTZ00420        133 WNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA---SSFHIH  208 (568)
T ss_pred             ECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEE---EEEecc
Confidence            93  44 46789999999999999998877775 457899999985  48888889999999999988654   445667


Q ss_pred             cccEEEE-----E--eCCCEEEEEeCCC----cEEEEECCC-ceEEEEEcCCc--ccEEEEE-e-CCCEEEEEeCCCcEE
Q psy9182         357 RAAVNVV-----D--FDEKYIVSASGDR----TIKVWNTSS-CEFVRTLNGHK--RGIACLQ-Y-RDRLVVSGSSDNTIR  420 (486)
Q Consensus       357 ~~~v~~~-----~--~~~~~l~~~~~d~----~i~iwd~~~-~~~~~~~~~~~--~~v~~~~-~-~~~~l~~~~~dg~v~  420 (486)
                      .+.+.+.     .  .++.++++++.|+    .|++||+++ .+++..+..+.  +.+.... . ++.++++|+.|+.|+
T Consensus       209 ~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr  288 (568)
T PTZ00420        209 DGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCR  288 (568)
T ss_pred             cCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEE
Confidence            6654322     1  3678889888764    799999995 55565544332  3322221 1 378899999999999


Q ss_pred             EEECCCCeeeEEecC--cccCeEEEEecCCE
Q psy9182         421 LWDIECGACLRVLEG--HEELVRCIRFDAKR  449 (486)
Q Consensus       421 iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~  449 (486)
                      +|++..+. +..+..  +..++.+++|-+++
T Consensus       289 ~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        289 YYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             EEEccCCc-EEeecccccCCCccceEEcccc
Confidence            99998764 333322  45677888884444

>KOG0275|consensus

Probab=99.93  E-value=4.5e-25  Score=185.85  Aligned_cols=232  Identities=24%  Similarity=0.410  Sum_probs=197.5

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc--------CCcccEEEEEe--cCCEEEEEeCCCcEEEEECC
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT--------GHTGSVLCLQY--DERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~  302 (486)
                      .......|+|||++|++|+.||-|.+||..+|+..+.++        -+..+|.|++|  |..++++|+.||.|++|.++
T Consensus       214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~  293 (508)
T KOG0275|consen  214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE  293 (508)
T ss_pred             cchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence            334556689999999999999999999999988765443        46788999999  78899999999999999999


Q ss_pred             CCcEEEEec-ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC
Q psy9182         303 TGEMVNTLI-HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR  377 (486)
Q Consensus       303 ~~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~  377 (486)
                      +|.+++.+. .|...|+++.|+.+  .+++++.|.++++--+.+++.+   ..+.+|...|+...|  +|.++++++.||
T Consensus       294 tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L---KEfrGHsSyvn~a~ft~dG~~iisaSsDg  370 (508)
T KOG0275|consen  294 TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL---KEFRGHSSYVNEATFTDDGHHIISASSDG  370 (508)
T ss_pred             cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH---HHhcCccccccceEEcCCCCeEEEecCCc
Confidence            999999996 89999999999854  8999999999999999998766   667899999999998  899999999999


Q ss_pred             cEEEEECCCceEEEEEcCCc--ccEEEEEe---CCCEEEEEeCCCcEEEEECCCCeeeEEecCc----ccCeEEEE-ecC
Q psy9182         378 TIKVWNTSSCEFVRTLNGHK--RGIACLQY---RDRLVVSGSSDNTIRLWDIECGACLRVLEGH----EELVRCIR-FDA  447 (486)
Q Consensus       378 ~i~iwd~~~~~~~~~~~~~~--~~v~~~~~---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h----~~~v~~~~-~~~  447 (486)
                      +|++|+..+.+++.+++...  .+|..+..   +...++++...++|+|-++. |+.++.+...    .+-|.++- ..|
T Consensus       371 tvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkG  449 (508)
T KOG0275|consen  371 TVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKG  449 (508)
T ss_pred             cEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCC
Confidence            99999999999999988443  45555544   57789999999999999997 8888888532    22354433 389


Q ss_pred             CEEEEEeCCCcEEEEeCCCCC
Q psy9182         448 KRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       448 ~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      .++.+.++|+.++.|.+.++.
T Consensus       450 ewiYcigED~vlYCF~~~sG~  470 (508)
T KOG0275|consen  450 EWIYCIGEDGVLYCFSVLSGK  470 (508)
T ss_pred             cEEEEEccCcEEEEEEeecCc
Confidence            999999999999999988764

>KOG0305|consensus

Probab=99.93  E-value=2.3e-24  Score=198.60  Aligned_cols=232  Identities=26%  Similarity=0.413  Sum_probs=195.0

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecC-cccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~-h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ...++++.++++|.+|+.|..+|.|.|||..+.+.++.+.+ |...|.+++|+                           
T Consensus       217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~---------------------------  269 (484)
T KOG0305|consen  217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN---------------------------  269 (484)
T ss_pred             CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc---------------------------
Confidence            57889999999999999999999999999999999999988 88888888874                           


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                   +..+.+|+.++.|..+|++
T Consensus       270 -------------------------------------------------------------~~~lssGsr~~~I~~~dvR  288 (484)
T KOG0305|consen  270 -------------------------------------------------------------SSVLSSGSRDGKILNHDVR  288 (484)
T ss_pred             -------------------------------------------------------------CceEEEecCCCcEEEEEEe
Confidence                                                                         2335556666666666666


Q ss_pred             CceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC---CeEEEEe--CCC
Q psy9182         263 SLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCS--KDR  334 (486)
Q Consensus       263 ~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~--~dg  334 (486)
                      ..+.... +.+|...|..+.|  |+.++++|+.|+.+.|||....+++..+..|...|.+++|+|   +.||+|+  .|+
T Consensus       289 ~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~  368 (484)
T KOG0305|consen  289 ISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR  368 (484)
T ss_pred             cchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence            5554433 7789999999999  899999999999999999988899999999999999999986   5888875  699


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEEE--eCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCC
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSA--SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDR  408 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~  408 (486)
                      .|++||..++..+...    .....|..+.|.  .+-++++  ..++.|.||+..+.+.+..+.+|...|..+++  +|.
T Consensus       369 ~i~fwn~~~g~~i~~v----dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~  444 (484)
T KOG0305|consen  369 CIKFWNTNTGARIDSV----DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGE  444 (484)
T ss_pred             EEEEEEcCCCcEeccc----ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCC
Confidence            9999999988765432    357889999993  3335543  45778999999999999999999999988887  589


Q ss_pred             EEEEEeCCCcEEEEECCCC
Q psy9182         409 LVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~  427 (486)
                      .+++|+.|.++++|++-..
T Consensus       445 ~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  445 TIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEEEecccCcEEeccccCC
Confidence            9999999999999998653

>KOG4283|consensus

Probab=99.93  E-value=2.7e-23  Score=173.01  Aligned_cols=291  Identities=22%  Similarity=0.358  Sum_probs=211.1

Q ss_pred             cCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCce
Q psy9182         143 NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKF  222 (486)
Q Consensus       143 ~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (486)
                      ..|.+.|..+...+              -.+.++++|+.||.|.+||+.+.........                ..+..
T Consensus        40 r~HgGsvNsL~id~--------------tegrymlSGgadgsi~v~Dl~n~t~~e~s~l----------------i~k~~   89 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDL--------------TEGRYMLSGGADGSIAVFDLQNATDYEASGL----------------IAKHK   89 (397)
T ss_pred             ccCCCccceeeecc--------------ccceEEeecCCCccEEEEEeccccchhhccc----------------eehee
Confidence            45778888888764              4678899999999999999966431110000                00000


Q ss_pred             eEEEEeccCCCc---cceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-----cCCEEEEEeCCC
Q psy9182         223 LLQRINCRSENS---KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-----DERVIISGSSDS  294 (486)
Q Consensus       223 ~~~~~~~~~~~~---~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg  294 (486)
                      .+-..+....|.   ..+.-+..|...+.+++-|.++++||..+.+....|+ -++.|.+-++     .-.++++|..|-
T Consensus        90 c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~  168 (397)
T KOG4283|consen   90 CIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDV  168 (397)
T ss_pred             eeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCC
Confidence            110111112222   3334455588899999999999999999988887776 3345544333     346788888999


Q ss_pred             cEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCC------------ceeeEEeeecCccc
Q psy9182         295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPN------------EITLRRVLVGHRAA  359 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~------------~~~~~~~~~~~~~~  359 (486)
                      .|++-|+.+|...+.+.+|.+.|.++.|+|.   .|++|+.||.|++||++...            .....+....|.+.
T Consensus       169 ~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gk  248 (397)
T KOG4283|consen  169 QVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGK  248 (397)
T ss_pred             cEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccce
Confidence            9999999999999999999999999999986   78999999999999997641            11122234568888


Q ss_pred             EEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc---CCcc----cEEEEEeCCCEEEEEeCCCcEEEEECCCCeee
Q psy9182         360 VNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN---GHKR----GIACLQYRDRLVVSGSSDNTIRLWDIECGACL  430 (486)
Q Consensus       360 v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~----~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~  430 (486)
                      +..++|  ++.++++++.|..+++|+..+|+....-.   .|..    .+..-+.+...++---.++.+.++++-+|+.+
T Consensus       249 vngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~i  328 (397)
T KOG4283|consen  249 VNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFV  328 (397)
T ss_pred             eeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeEEEEEccCceEE
Confidence            999999  89999999999999999998876422111   1111    11111223444554556799999999999999


Q ss_pred             EEecCcccCeEEEEecC--CEEEEEeCCCcEEEEeC
Q psy9182         431 RVLEGHEELVRCIRFDA--KRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~~~--~~l~s~~~dg~v~iwdl  464 (486)
                      +.+..|-..|.+.++.+  +.+.++..|+.|..|-.
T Consensus       329 r~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  329 RRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP  364 (397)
T ss_pred             EeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence            99999988888888854  45999999999999987

>KOG2106|consensus

Probab=99.93  E-value=5.7e-23  Score=182.96  Aligned_cols=337  Identities=17%  Similarity=0.289  Sum_probs=231.6

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      +.-+.|+.|.++| -++||.++|.|.||+..+.+..+....|.++|.+++.-                .+..|++|+.|+
T Consensus       246 kk~Vl~v~F~eng-dviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~l----------------r~GtllSGgKDR  308 (626)
T KOG2106|consen  246 KKFVLCVTFLENG-DVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCML----------------RDGTLLSGGKDR  308 (626)
T ss_pred             ceEEEEEEEcCCC-CEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEe----------------cCccEeecCccc
Confidence            3567899999888 58899999999999999888888877999999999874                223466699999


Q ss_pred             cceeeecccccccccCCCCCCCC-----CCCCcccccccccCceeEEE-------EeccCCCccceEEEEeCCCEEEEEe
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGP-----PPSGPSIENNWRMGKFLLQR-------INCRSENSKGVYCLQYDDHKIVSGL  251 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~l~~~~  251 (486)
                      .|..|| .+.........+....     ......+...-.........       ....+....--++.+|+...+++++
T Consensus       309 ki~~Wd-~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~g  387 (626)
T KOG2106|consen  309 KIILWD-DNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCG  387 (626)
T ss_pred             eEEecc-ccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeecc
Confidence            999999 3322221111111100     00000000000000000000       0111122333456677889999999


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      .|+.+++|+  ..+.+.... -..++.|+.|  .| .++.|+..|...+.|.++...+..-.. ..++.+++|+++  ++
T Consensus       388 qdk~v~lW~--~~k~~wt~~-~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~l  462 (626)
T KOG2106|consen  388 QDKHVRLWN--DHKLEWTKI-IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFL  462 (626)
T ss_pred             CcceEEEcc--CCceeEEEE-ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEE
Confidence            999999999  334443332 3356677777  45 899999999999999999666655555 889999999864  99


Q ss_pred             EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc-----------
Q psy9182         328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN-----------  394 (486)
Q Consensus       328 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-----------  394 (486)
                      ++|+.|+.|++|.+....... .+.-..+...|+.+.|  |++++.+-+.|-.|..|.....+.....+           
T Consensus       463 Avgs~d~~iyiy~Vs~~g~~y-~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~l  541 (626)
T KOG2106|consen  463 AVGSHDNHIYIYRVSANGRKY-SRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTL  541 (626)
T ss_pred             EEecCCCeEEEEEECCCCcEE-EEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEE
Confidence            999999999999987654332 1222334488999999  89999999999999999644332222111           


Q ss_pred             -------CCcccEE--EEEeCCCEEEEEeCCCcEEEEECCCC---eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         395 -------GHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       395 -------~~~~~v~--~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                             .+...+.  +.+...+++|+|.+.|.|++|...-.   .....+.+|.+-|++++|  +...|++.+.|..|.
T Consensus       542 GF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~  621 (626)
T KOG2106|consen  542 GFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIM  621 (626)
T ss_pred             EEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEE
Confidence                   1222222  22334788999999999999997643   345677899999999999  666777777999999


Q ss_pred             EEeC
Q psy9182         461 VWNL  464 (486)
Q Consensus       461 iwdl  464 (486)
                      .|++
T Consensus       622 qW~l  625 (626)
T KOG2106|consen  622 QWRL  625 (626)
T ss_pred             EEEe
Confidence            9987

>KOG0646|consensus

Probab=99.93  E-value=5.4e-24  Score=187.88  Aligned_cols=224  Identities=23%  Similarity=0.440  Sum_probs=182.3

Q ss_pred             CCEEEEEec-CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEE
Q psy9182         244 DHKIVSGLR-DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL  320 (486)
Q Consensus       244 ~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~  320 (486)
                      +.+++++.. ...|.+|.+...........-+++|.|+.-  +|.+++.|+..|.|++|.+.+|.++..+..|...|+++
T Consensus        50 ~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL  129 (476)
T KOG0646|consen   50 NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCL  129 (476)
T ss_pred             hhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEE
Confidence            355555543 347899987765554433345678899877  67888888899999999999999999999999999999


Q ss_pred             EEcCC--eEEEEeCCCcEEEEECCC------CCceeeEEeeecCcccEEEEEe-C---CCEEEEEeCCCcEEEEECCCce
Q psy9182         321 RFSNG--MMVTCSKDRSIAVWDMVS------PNEITLRRVLVGHRAAVNVVDF-D---EKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       321 ~~~~~--~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~~~~v~~~~~-~---~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .|+++  ++++|+.||.|.+|++..      .........+..|.-+|+.+.. .   ..++++++.|.++++||+..+.
T Consensus       130 ~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~  209 (476)
T KOG0646|consen  130 KFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV  209 (476)
T ss_pred             EEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce
Confidence            99865  999999999999998742      1234556778899999999988 2   3589999999999999999999


Q ss_pred             EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC----------------CeeeEEecCccc--CeEEEEe--c
Q psy9182         389 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC----------------GACLRVLEGHEE--LVRCIRF--D  446 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~----------------~~~~~~~~~h~~--~v~~~~~--~  446 (486)
                      ++.++. ....+.++..+  +..+..|+.+|.|.+.++..                +..+..+.+|.+  .|+|++.  |
T Consensus       210 LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~D  288 (476)
T KOG0646|consen  210 LLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTD  288 (476)
T ss_pred             eeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecC
Confidence            888776 34556666665  78999999999999988743                234566788988  9999988  9


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCC
Q psy9182         447 AKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       447 ~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      |..|++|+.||.|.|||+.+.+
T Consensus       289 gtlLlSGd~dg~VcvWdi~S~Q  310 (476)
T KOG0646|consen  289 GTLLLSGDEDGKVCVWDIYSKQ  310 (476)
T ss_pred             ccEEEeeCCCCCEEEEecchHH
Confidence            9999999999999999998543

>KOG1332|consensus

Probab=99.93  E-value=2.4e-24  Score=174.62  Aligned_cols=228  Identities=23%  Similarity=0.391  Sum_probs=187.9

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCc---eeeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcE--EEE
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSL---QCIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEM--VNT  309 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~--~~~  309 (486)
                      .+.+.|++|++++.|++|+|+..++.   +.+.++.+|.++|..++|    -|.+|++++.||.|.||.-.+++-  ...
T Consensus        18 ~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e   97 (299)
T KOG1332|consen   18 QLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYE   97 (299)
T ss_pred             hhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhh
Confidence            35567999999999999999998764   567889999999999999    478999999999999999887743  345


Q ss_pred             ecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----CC-----------CE
Q psy9182         310 LIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----DE-----------KY  369 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----~~-----------~~  369 (486)
                      ...|...|.+++|.|.    .|++++.||.|.+.+.+.............|...|+++++     .|           +.
T Consensus        98 ~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~kr  177 (299)
T KOG1332|consen   98 HAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKR  177 (299)
T ss_pred             hhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccce
Confidence            5778999999999875    8999999999999998876444444666789999999988     23           56


Q ss_pred             EEEEeCCCcEEEEECCCc--eEEEEEcCCcccEEEEEeC------CCEEEEEeCCCcEEEEECCCC-e--eeEEecCccc
Q psy9182         370 IVSASGDRTIKVWNTSSC--EFVRTLNGHKRGIACLQYR------DRLVVSGSSDNTIRLWDIECG-A--CLRVLEGHEE  438 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~------~~~l~~~~~dg~v~iwd~~~~-~--~~~~~~~h~~  438 (486)
                      |++|+.|..|+||+..++  +.-.++++|...|+.++|.      ..+||+++.||+|.||..+.. +  ....++....
T Consensus       178 lvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~  257 (299)
T KOG1332|consen  178 LVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPD  257 (299)
T ss_pred             eeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCc
Confidence            999999999999998875  3445689999999998884      357999999999999987621 1  1223344567


Q ss_pred             CeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         439 LVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       439 ~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .+..+.|  .|+.|+.++.|+.|.+|.-..
T Consensus       258 ~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  258 VVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             ceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            8999999  999999999999999998543

>KOG1446|consensus

Probab=99.93  E-value=2.2e-22  Score=169.76  Aligned_cols=234  Identities=19%  Similarity=0.295  Sum_probs=192.8

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEEE
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMVN  308 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~~  308 (486)
                      .....+.++.+|..+++++.|..+++||..+++.++++..+.-.+..+.|  ..+.++.++.  |.+|+..++.+++.++
T Consensus        15 ~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylR   94 (311)
T KOG1446|consen   15 GKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLR   94 (311)
T ss_pred             CceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEE
Confidence            33444556678999999999999999999999999999888777777777  5667777766  8899999999999999


Q ss_pred             EecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         309 TLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      .+.+|...|..+..+|  +.+++++.|++|++||++..+...   .+.....++.+..+.|-++|++.....|++||++.
T Consensus        95 YF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg---~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs  171 (311)
T KOG1446|consen   95 YFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQG---LLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRS  171 (311)
T ss_pred             EcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCce---EEecCCCcceeECCCCcEEEEecCCCeEEEEEecc
Confidence            9999999999999986  599999999999999999776553   33345567777777899999998888999999987


Q ss_pred             c--eEEEEEc---CCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe---EEEEe--cCCEEEEEe
Q psy9182         387 C--EFVRTLN---GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV---RCIRF--DAKRIVSGA  454 (486)
Q Consensus       387 ~--~~~~~~~---~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v---~~~~~--~~~~l~s~~  454 (486)
                      .  .+..++.   ......+.+.|  +|++|+.++..+.+++.|.-+|..+..+..+...-   .+..|  |++++++|+
T Consensus       172 ~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs  251 (311)
T KOG1446|consen  172 FDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGS  251 (311)
T ss_pred             cCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEec
Confidence            3  3444444   33456677777  59999999999999999999999999988775432   23444  999999999


Q ss_pred             CCCcEEEEeCCCCCC
Q psy9182         455 YDGKIKVWNLVAALD  469 (486)
Q Consensus       455 ~dg~v~iwdl~~~~~  469 (486)
                      .||+|++|+++++.+
T Consensus       252 ~dg~i~vw~~~tg~~  266 (311)
T KOG1446|consen  252 DDGTIHVWNLETGKK  266 (311)
T ss_pred             CCCcEEEEEcCCCcE
Confidence            999999999988764

>KOG0640|consensus

Probab=99.93  E-value=8.2e-24  Score=177.25  Aligned_cols=297  Identities=23%  Similarity=0.338  Sum_probs=217.0

Q ss_pred             eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccc
Q psy9182         139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWR  218 (486)
Q Consensus       139 ~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (486)
                      ...+..|+.++.+-+|+               +||.++++|+.|..|++.|++.......+.....          ..-+
T Consensus       105 t~ylt~HK~~cR~aafs---------------~DG~lvATGsaD~SIKildvermlaks~~~em~~----------~~~q  159 (430)
T KOG0640|consen  105 TKYLTSHKSPCRAAAFS---------------PDGSLVATGSADASIKILDVERMLAKSKPKEMIS----------GDTQ  159 (430)
T ss_pred             eEEEeecccceeeeeeC---------------CCCcEEEccCCcceEEEeehhhhhhhcchhhhcc----------CCcc
Confidence            34567899999999998               6889999999999999999864322211111000          0001


Q ss_pred             cCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeC
Q psy9182         219 MGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSS  292 (486)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~  292 (486)
                      .....   +....+|...+  +.|+|....|++|+.|++|++||...-...+.++  ....+|.+++|  .|.++++|..
T Consensus       160 a~hPv---IRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTd  236 (430)
T KOG0640|consen  160 ARHPV---IRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTD  236 (430)
T ss_pred             cCCce---EeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecC
Confidence            11111   22233454444  4556678899999999999999987643332222  24467889988  7899999999


Q ss_pred             CCcEEEEECCCCcEEEEe---cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecC-cccEEEEEe-
Q psy9182         293 DSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDF-  365 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~-  365 (486)
                      -.++++||+++-++...-   ..|.+.|+++.+++  .+.++++.||.|++||--+++.+..+  ...| ...|.+..| 
T Consensus       237 Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~--~~AH~gsevcSa~Ft  314 (430)
T KOG0640|consen  237 HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTI--GNAHGGSEVCSAVFT  314 (430)
T ss_pred             CCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHH--HhhcCCceeeeEEEc
Confidence            999999999998876544   45788999999985  48999999999999998777665432  2334 346777777 


Q ss_pred             -CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--cc---EEEEEeC--CCEEEEEe-CCCcEEEEECCCCeeeEEe-cC
Q psy9182         366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--RG---IACLQYR--DRLVVSGS-SDNTIRLWDIECGACLRVL-EG  435 (486)
Q Consensus       366 -~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~---v~~~~~~--~~~l~~~~-~dg~v~iwd~~~~~~~~~~-~~  435 (486)
                       +++|+++.+.|..+++|.+.+++++..+.+-.  +.   -+...|+  ..+++.-. ..+.+.-||.+++..+..+ -+
T Consensus       315 kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slg  394 (430)
T KOG0640|consen  315 KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLG  394 (430)
T ss_pred             cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccC
Confidence             89999999999999999999999999887542  11   1222333  56665544 3578999999998776655 47


Q ss_pred             cccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         436 HEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       436 h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      |.+.+..+..  .+.-+++++.|-.+++|--+
T Consensus       395 Hn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  395 HNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             CCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence            9999999888  56679999999999999754

>KOG1539|consensus

Probab=99.92  E-value=1.3e-22  Score=191.20  Aligned_cols=340  Identities=17%  Similarity=0.288  Sum_probs=240.4

Q ss_pred             ccccccCCccCcce-EEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         105 RDFISLLPNFDEKY-IVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       105 ~~~~~~~~s~~~~~-l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ..|+++.|.-||.. +|+|+..|.+-+||++..+++..+. .|.+.|....|.               +....+++++.|
T Consensus       245 g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl---------------~~epVl~ta~~D  309 (910)
T KOG1539|consen  245 GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFL---------------PGEPVLVTAGAD  309 (910)
T ss_pred             cceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceec---------------CCCceEeeccCC
Confidence            67889999988874 6667788999999999888877665 898899888886               344457888888


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccc------------------------ccc---ccCc----eeEEEEe---
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIE------------------------NNW---RMGK----FLLQRIN---  228 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~---~~~~----~~~~~~~---  228 (486)
                      +.+++|=.+++...+..-....+...+...+.                        ...   ..+.    ....+..   
T Consensus       310 nSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~  389 (910)
T KOG1539|consen  310 NSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFS  389 (910)
T ss_pred             CceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccc
Confidence            88888876644332222111111000000000                        000   0000    0000000   


Q ss_pred             ccCCCccceEEEEeCC-------CEEEEEecCCeEEEEECCCcee-eEEEc-----CCcccEEEEE--ecCCEEEEEeCC
Q psy9182         229 CRSENSKGVYCLQYDD-------HKIVSGLRDNTIKVWDRVSLQC-IKVLT-----GHTGSVLCLQ--YDERVIISGSSD  293 (486)
Q Consensus       229 ~~~~~~~~v~~~~~~~-------~~l~~~~~dg~i~i~d~~~~~~-~~~~~-----~~~~~v~~~~--~~~~~l~~~~~d  293 (486)
                      .....-..+..++..+       +.+++--.+...+.|+..+... ...+.     .....+++++  +.|++.+.|+..
T Consensus       390 ~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~  469 (910)
T KOG1539|consen  390 TEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSK  469 (910)
T ss_pred             hhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccC
Confidence            1111223455555532       3455555667899999877554 23332     1224455544  489999999999


Q ss_pred             CcEEEEECCCCcEEEEe---cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C
Q psy9182         294 STVRVWDVNTGEMVNTL---IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D  366 (486)
Q Consensus       294 g~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~  366 (486)
                      |.|-+|++.+|-....+   ..|..+|+.++.++  ..+++++.+|.+++||..+........  .  ...+.++..  .
T Consensus       470 G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~--l--~~~~~~iv~hr~  545 (910)
T KOG1539|consen  470 GTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLR--L--GSSITGIVYHRV  545 (910)
T ss_pred             CeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeec--c--CCCcceeeeeeh
Confidence            99999999999888888   58999999999974  479999999999999998765332221  1  233334444  6


Q ss_pred             CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEE
Q psy9182         367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR  444 (486)
Q Consensus       367 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  444 (486)
                      ...++.+..|-.|+++|..+.+.++.+.+|...|+.+.|  +|++|++++.|++|++||+.++.++-.+. -..+.+++.
T Consensus       546 s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls  624 (910)
T KOG1539|consen  546 SDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLS  624 (910)
T ss_pred             hhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeE
Confidence            678888899999999999999999999999999999988  49999999999999999999999987775 356788888


Q ss_pred             e--cCCEEEEEeCC-CcEEEEeC
Q psy9182         445 F--DAKRIVSGAYD-GKIKVWNL  464 (486)
Q Consensus       445 ~--~~~~l~s~~~d-g~v~iwdl  464 (486)
                      |  +|.+|||+..| .-|++|.=
T Consensus       625 ~SPngD~LAT~Hvd~~gIylWsN  647 (910)
T KOG1539|consen  625 FSPNGDFLATVHVDQNGIYLWSN  647 (910)
T ss_pred             ECCCCCEEEEEEecCceEEEEEc
Confidence            8  89999999988 56999973

>KOG0289|consensus

Probab=99.92  E-value=3.5e-23  Score=181.00  Aligned_cols=229  Identities=21%  Similarity=0.365  Sum_probs=195.6

Q ss_pred             ccceEEEEeCC--CEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         234 SKGVYCLQYDD--HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       234 ~~~v~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      ...+.++.+.+  ..+++|+.|..+.++|...++.+..++||...|+.+.+  +...+++++.|-.|+||..........
T Consensus       219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~  298 (506)
T KOG0289|consen  219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTS  298 (506)
T ss_pred             CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccc
Confidence            34555555544  78999999999999999999999999999999999998  567889999999999999988877778


Q ss_pred             ecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         310 LIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~  385 (486)
                      ...|..+|+.+..++  +++++++.|+...+.|++++..+...... .....+++..|  ||..+.+|..|+.|++||+.
T Consensus       299 ~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~-~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlk  377 (506)
T KOG0289|consen  299 SRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDE-TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLK  377 (506)
T ss_pred             cccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeec-cccceeEEeeEcCCceEEeccCCCceEEEEEcC
Confidence            888999999988874  59999999999999999999876433321 23345677777  99999999999999999999


Q ss_pred             CceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcc-cCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         386 SCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      ++..+..|.+|.++|..++|.  |-+|+++++|+.|++||++.-+...++.-.. .+|.++.|  .|.+|+.+|.|=+|+
T Consensus       378 s~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy  457 (506)
T KOG0289|consen  378 SQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVY  457 (506)
T ss_pred             CccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEE
Confidence            999999999999999999994  8899999999999999999888777775432 37999999  789999998886676


Q ss_pred             EEe
Q psy9182         461 VWN  463 (486)
Q Consensus       461 iwd  463 (486)
                      +++
T Consensus       458 ~~~  460 (506)
T KOG0289|consen  458 ICK  460 (506)
T ss_pred             EEe
Confidence            666

>KOG1332|consensus

Probab=99.92  E-value=5.7e-24  Score=172.41  Aligned_cols=241  Identities=18%  Similarity=0.291  Sum_probs=182.8

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccc---cceeeecCcccceeEEEee-cceeEecCCCCceeccCcceee
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~---~~~~~l~~h~~~V~~~~~~-~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      .|..-|........|++|||+++|++|+|+....+   +++.+|.||.++|..++|. |              .-|..|+
T Consensus         9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahP--------------k~G~iLA   74 (299)
T KOG1332|consen    9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHP--------------KFGTILA   74 (299)
T ss_pred             hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeeccc--------------ccCcEee
Confidence            34445555566667999999999999999998754   4688999999999999994 3              2356799


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEe--CCCEEEEEecC
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQY--DDHKIVSGLRD  253 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~--~~~~l~~~~~d  253 (486)
                      +++.||.|.+|.-.++.-...                             ..+..|...+.  ++.|  .|-.|++++.|
T Consensus        75 ScsYDgkVIiWke~~g~w~k~-----------------------------~e~~~h~~SVNsV~wapheygl~LacasSD  125 (299)
T KOG1332|consen   75 SCSYDGKVIIWKEENGRWTKA-----------------------------YEHAAHSASVNSVAWAPHEYGLLLACASSD  125 (299)
T ss_pred             EeecCceEEEEecCCCchhhh-----------------------------hhhhhhcccceeecccccccceEEEEeeCC
Confidence            999999999999655422111                             11223444443  4444  35679999999


Q ss_pred             CeEEEEECCCc---eeeEEEcCCcccEEEEEe-----cC-----------CEEEEEeCCCcEEEEECCCCc--EEEEecc
Q psy9182         254 NTIKVWDRVSL---QCIKVLTGHTGSVLCLQY-----DE-----------RVIISGSSDSTVRVWDVNTGE--MVNTLIH  312 (486)
Q Consensus       254 g~i~i~d~~~~---~~~~~~~~~~~~v~~~~~-----~~-----------~~l~~~~~dg~i~vwd~~~~~--~~~~~~~  312 (486)
                      |.|.|.+.++.   ...+....|.-.|++++|     .|           +.|++|+.|..|+||+..+++  ...++.+
T Consensus       126 G~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~  205 (299)
T KOG1332|consen  126 GKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEG  205 (299)
T ss_pred             CcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhh
Confidence            99999987664   233455679999999988     22           569999999999999998763  3456889


Q ss_pred             cCccEEEEEEcCC------eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         313 HCEAVLHLRFSNG------MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       313 ~~~~i~~~~~~~~------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      |.+.|..++|.|.      .+++++.||++.||-.+..........+......+..++|  .|+.|++++.|+.+.+|.-
T Consensus       206 H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke  285 (299)
T KOG1332|consen  206 HKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKE  285 (299)
T ss_pred             cchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEe
Confidence            9999999999874      7999999999999988744333333444456677888887  8999999999999999975


Q ss_pred             C
Q psy9182         385 S  385 (486)
Q Consensus       385 ~  385 (486)
                      .
T Consensus       286 ~  286 (299)
T KOG1332|consen  286 N  286 (299)
T ss_pred             C
Confidence            4

>KOG2106|consensus

Probab=99.92  E-value=3.4e-21  Score=171.74  Aligned_cols=342  Identities=17%  Similarity=0.341  Sum_probs=229.8

Q ss_pred             ccccccccccCCccCcceEEEeecCc--------eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDR--------TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD  172 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg--------~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~  172 (486)
                      ..|..++.|+..+||.-++++|-..|        .|+|||..+-..+..+.....+|.|++|+.-             ..
T Consensus       101 ~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~-------------~~  167 (626)
T KOG2106|consen  101 LGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKI-------------NG  167 (626)
T ss_pred             cCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeeccc-------------CC
Confidence            35678999999999999999876555        5999998888888888888889999999631             11


Q ss_pred             cce--eecCCCCCcceeeecccccccccCCCCCCC-----CCC--------CCcccccccccCceeEEE-Ee-ccCCCcc
Q psy9182         173 EFQ--IVSSSHDDTILIWDFLNYSETPIQGGGGGG-----PPP--------SGPSIENNWRMGKFLLQR-IN-CRSENSK  235 (486)
Q Consensus       173 ~~~--l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~  235 (486)
                      +.+  .+--+.+..+.+||+...............     ..+        .+......|......+.+ .. ..+....
T Consensus       168 G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk  247 (626)
T KOG2106|consen  168 GSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKK  247 (626)
T ss_pred             CceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccce
Confidence            111  222344555667777554332222211100     001        111222223222211111 11 1112226


Q ss_pred             ceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCc--------
Q psy9182         236 GVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGE--------  305 (486)
Q Consensus       236 ~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~--------  305 (486)
                      .++|+.+. +.-+++|.++|.|.||+..+.+..+....|.+.|.++.. ....|++|+.|..|..||-.-.+        
T Consensus       248 ~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elPe  327 (626)
T KOG2106|consen  248 FVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELPE  327 (626)
T ss_pred             EEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCch
Confidence            67777773 445889999999999999988888887799999999887 34455669999999999832100        


Q ss_pred             ---EEE-----------------------------EecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEE
Q psy9182         306 ---MVN-----------------------------TLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRR  351 (486)
Q Consensus       306 ---~~~-----------------------------~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~  351 (486)
                         .++                             ...+|......++..+  +++++++.|+.+++|+  ..+..  ..
T Consensus       328 ~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~--wt  403 (626)
T KOG2106|consen  328 QFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLE--WT  403 (626)
T ss_pred             hcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCcee--EE
Confidence               001                             1123344444555544  4899999999999999  22221  12


Q ss_pred             eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-
Q psy9182         352 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-  426 (486)
Q Consensus       352 ~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~-  426 (486)
                      ..  -..++.++.|  .| .++.|+..|...+.|.++...+..-.. ..+++++.+  +|.+||.|+.|+.|+||.+.. 
T Consensus       404 ~~--~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~  479 (626)
T KOG2106|consen  404 KI--IEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSAN  479 (626)
T ss_pred             EE--ecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCC
Confidence            22  2344556666  56 999999999999999999666555544 788888887  599999999999999999864 


Q ss_pred             CeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         427 GACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       427 ~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      |...... +.|.++|+.+.|  |+++|.+-+.|-.|..|.
T Consensus       480 g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~  519 (626)
T KOG2106|consen  480 GRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK  519 (626)
T ss_pred             CcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence            3333333 334589999999  999999999999999994

>KOG0647|consensus

Probab=99.92  E-value=5.8e-23  Score=171.64  Aligned_cols=234  Identities=23%  Similarity=0.358  Sum_probs=181.4

Q ss_pred             CCccceEEEEe-CCCEEEEEecCCeEEEEECCC-ceee-EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE
Q psy9182         232 ENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVS-LQCI-KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM  306 (486)
Q Consensus       232 ~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~  306 (486)
                      ......++|+| ...++++|+.||+||+|++.. +... +....|.++|.+++|  ||..+++|+.|+.+++||+.++ .
T Consensus        27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q  105 (347)
T KOG0647|consen   27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-Q  105 (347)
T ss_pred             ccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-C
Confidence            45566677888 456677999999999999877 3333 445579999999999  7899999999999999999999 4


Q ss_pred             EEEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEE
Q psy9182         307 VNTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW  382 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iw  382 (486)
                      ...+..|..+|..+.|-++    .|++|+.|++|+.||++....+....    -...+.++..-...++++..+..|.+|
T Consensus       106 ~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~----LPeRvYa~Dv~~pm~vVata~r~i~vy  181 (347)
T KOG0647|consen  106 VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ----LPERVYAADVLYPMAVVATAERHIAVY  181 (347)
T ss_pred             eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee----ccceeeehhccCceeEEEecCCcEEEE
Confidence            5677889999999999764    67999999999999999877654332    356788888878889999999999999


Q ss_pred             ECCCceEEE-EEcC-CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCC--eeeEEecCccc---------CeEEEEecC
Q psy9182         383 NTSSCEFVR-TLNG-HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEE---------LVRCIRFDA  447 (486)
Q Consensus       383 d~~~~~~~~-~~~~-~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~h~~---------~v~~~~~~~  447 (486)
                      +++++.... .... -.-.++|++.  +....+.|+-+|.+.|..+..+  +.-..|+.|..         .|++|+|++
T Consensus       182 nL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP  261 (347)
T KOG0647|consen  182 NLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHP  261 (347)
T ss_pred             EcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeec
Confidence            998754322 1111 1223455554  5556699999999999999876  44455666652         578899944


Q ss_pred             --CEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         448 --KRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       448 --~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                        ..|+|+|.||++.+||-+...+.
T Consensus       262 ~hgtlvTaGsDGtf~FWDkdar~kL  286 (347)
T KOG0647|consen  262 VHGTLVTAGSDGTFSFWDKDARTKL  286 (347)
T ss_pred             ccceEEEecCCceEEEecchhhhhh
Confidence              45999999999999997766543

>KOG0639|consensus

Probab=99.91  E-value=2.2e-23  Score=185.42  Aligned_cols=273  Identities=19%  Similarity=0.319  Sum_probs=209.1

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccc---cceeeecC--cccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC---EFVRTLNG--HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~---~~~~~l~~--h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      |..-|.++..|...+++.||+. |.|+|||+..-   ..+..|..  ..+.|.++..               .+|+..|+
T Consensus       418 HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL---------------~pdgrtLi  481 (705)
T KOG0639|consen  418 HGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKL---------------LPDGRTLI  481 (705)
T ss_pred             cCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEe---------------cCCCceEE
Confidence            3334455667778889999875 79999999642   12222221  1223333333               27889999


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                      +|+.-.++.|||+...........                           .........+++++|.+..+++..||.|.
T Consensus       482 vGGeastlsiWDLAapTprikael---------------------------tssapaCyALa~spDakvcFsccsdGnI~  534 (705)
T KOG0639|consen  482 VGGEASTLSIWDLAAPTPRIKAEL---------------------------TSSAPACYALAISPDAKVCFSCCSDGNIA  534 (705)
T ss_pred             eccccceeeeeeccCCCcchhhhc---------------------------CCcchhhhhhhcCCccceeeeeccCCcEE
Confidence            999999999999855432211100                           01123345567889999999999999999


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCC
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKD  333 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~d  333 (486)
                      |||+.+...++.|++|...+.||..  ||..|.+|+.|.+|+.||++++..+..... ...|.++.++|  +++++|-.+
T Consensus       535 vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF-~SQIfSLg~cP~~dWlavGMen  613 (705)
T KOG0639|consen  535 VWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF-SSQIFSLGYCPTGDWLAVGMEN  613 (705)
T ss_pred             EEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhh-hhhheecccCCCccceeeeccc
Confidence            9999999999999999999999988  799999999999999999999887665543 56788888875  599999999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE--EEEeCCCE
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRL  409 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~  409 (486)
                      +.+.+......+.    ..+..|...|.++.|  .|+++++.+.|+.+..|...-|..+...+... .|.  .+++++++
T Consensus       614 s~vevlh~skp~k----yqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE~S-sVlsCDIS~ddky  688 (705)
T KOG0639|consen  614 SNVEVLHTSKPEK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-SVLSCDISFDDKY  688 (705)
T ss_pred             CcEEEEecCCccc----eeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccccC-cceeeeeccCceE
Confidence            9999988776654    345568999999999  79999999999999999999888877766433 343  35667999


Q ss_pred             EEEEeCCCcEEEEEC
Q psy9182         410 VVSGSSDNTIRLWDI  424 (486)
Q Consensus       410 l~~~~~dg~v~iwd~  424 (486)
                      +++|+.|..-.||.+
T Consensus       689 IVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  689 IVTGSGDKKATVYEV  703 (705)
T ss_pred             EEecCCCcceEEEEE
Confidence            999999988888764

>KOG0269|consensus

Probab=99.91  E-value=3.6e-24  Score=199.93  Aligned_cols=228  Identities=20%  Similarity=0.407  Sum_probs=193.0

Q ss_pred             EeCCCEEEEEecCCeEEEEECCC---ceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVS---LQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      ..+.++||+++.+|.|.+||+..   .+.+..|..|...+.++.|   ..++|++|+.||+|++||++..+...++.+..
T Consensus        97 ~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nS  176 (839)
T KOG0269|consen   97 QLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNS  176 (839)
T ss_pred             cchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccc
Confidence            34678999999999999999987   5666788899999999999   67899999999999999999999999998889


Q ss_pred             ccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182         315 EAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       315 ~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ..|.++.|++   +.++++...|.+.+||++.....  ...+..|.+.|.++.|  ++.+||+|+.|+.|+|||..+.+.
T Consensus       177 ESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~--~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~  254 (839)
T KOG0269|consen  177 ESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRC--EKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA  254 (839)
T ss_pred             hhhhceeeccCCCceEEEecCCceEEEeeccCchhH--HHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc
Confidence            9999999985   48999999999999999987643  3567799999999999  788999999999999999987654


Q ss_pred             EEEEcCC-cccEEEEEeC---CCEEEEEe--CCCcEEEEECCCC-eeeEEecCcccCeEEEEe---cCCEEEEEeCCCcE
Q psy9182         390 VRTLNGH-KRGIACLQYR---DRLVVSGS--SDNTIRLWDIECG-ACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKI  459 (486)
Q Consensus       390 ~~~~~~~-~~~v~~~~~~---~~~l~~~~--~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v  459 (486)
                      ......+ ..++.++.|.   ...|++++  .|-.|+|||++.. -+..++..|...++.++|   |...|.+++.||+|
T Consensus       255 ~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv  334 (839)
T KOG0269|consen  255 KPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTV  334 (839)
T ss_pred             cceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHH
Confidence            4333333 3578899995   45677776  4788999999754 456788899999999999   45679999999999


Q ss_pred             EEEeCCCCCCC
Q psy9182         460 KVWNLVAALDP  470 (486)
Q Consensus       460 ~iwdl~~~~~~  470 (486)
                      ..-.++.+..|
T Consensus       335 ~qh~~knat~p  345 (839)
T KOG0269|consen  335 LQHLFKNATTP  345 (839)
T ss_pred             HHhhhhcccCh
Confidence            87777776654

>KOG4283|consensus

Probab=99.91  E-value=2e-22  Score=167.89  Aligned_cols=282  Identities=25%  Similarity=0.393  Sum_probs=204.1

Q ss_pred             hcccccccccccCCcc-CcceEEEeecCceeeeccccccc------c----e-----eeecCcccceeEEEeecceeEec
Q psy9182          99 LKPMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSCE------F----V-----RTLNGHKRGIACLQYRDRLVVSG  162 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~~------~----~-----~~l~~h~~~V~~~~~~~~~~~~~  162 (486)
                      +...|...|.++...+ .|+|+++|+.||.|.+||++...      +    +     ..-.+|+-.|..+.|-|      
T Consensus        38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP------  111 (397)
T KOG4283|consen   38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYP------  111 (397)
T ss_pred             eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEee------
Confidence            3455667777666544 68999999999999999997543      1    1     11246888888888865      


Q ss_pred             CCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe
Q psy9182         163 SSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY  242 (486)
Q Consensus       163 ~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  242 (486)
                              .|...+.+++.|.++++||.++.+........                              ......+++|
T Consensus       112 --------~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me------------------------------~~VYshamSp  153 (397)
T KOG4283|consen  112 --------IDTGMFTSSSFDHTLKVWDTNTLQEAVDFKME------------------------------GKVYSHAMSP  153 (397)
T ss_pred             --------ecCceeecccccceEEEeecccceeeEEeecC------------------------------ceeehhhcCh
Confidence                    46778999999999999998775543222111                              1111112232


Q ss_pred             ---CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCC-cEEEEe-----
Q psy9182         243 ---DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTG-EMVNTL-----  310 (486)
Q Consensus       243 ---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~-~~~~~~-----  310 (486)
                         .-.++|+|..+-.|++-|+.+|.+...+.+|.+.|.++.|.   .-.|++|+.||.|++||++.. .+...+     
T Consensus       154 ~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~  233 (397)
T KOG4283|consen  154 MAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNT  233 (397)
T ss_pred             hhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccC
Confidence               34568899999999999999999999999999999999993   447899999999999999754 232222     


Q ss_pred             ---------cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcc----cEEEEEeCCCEEEEEeC
Q psy9182         311 ---------IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA----AVNVVDFDEKYIVSASG  375 (486)
Q Consensus       311 ---------~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~l~~~~~  375 (486)
                               ..|.+.+..++|..  .++++++.|..+++|+..+++..........|..    .+..-..+...++.--.
T Consensus       234 k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~  313 (397)
T KOG4283|consen  234 KRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPN  313 (397)
T ss_pred             ccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEec
Confidence                     34667788888864  4899999999999999988765321111111111    11111123444444456


Q ss_pred             CCcEEEEECCCceEEEEEcCCcccEEEEEeCCC--EEEEEeCCCcEEEEEC
Q psy9182         376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDI  424 (486)
Q Consensus       376 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~v~iwd~  424 (486)
                      ++.+.++++-.+..++.+..|...+.|..+.++  ...+|..|+.|..|-.
T Consensus       314 ~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  314 DGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP  364 (397)
T ss_pred             CCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence            689999999999999999999888888888654  4889999999999986

>KOG0288|consensus

Probab=99.91  E-value=2.7e-23  Score=180.66  Aligned_cols=230  Identities=22%  Similarity=0.387  Sum_probs=177.1

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      ..|+++.+.++++++++++.|+.+++|++...+...+|.||++.|+++.|.               .....+++|+.|.+
T Consensus       220 g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~---------------~~~~~vVsgs~DRt  284 (459)
T KOG0288|consen  220 GNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFK---------------LSHSRVVSGSADRT  284 (459)
T ss_pred             CCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhh---------------ccccceeeccccch
Confidence            458899999999999999999999999999999999999999999999884               11122555555555


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  264 (486)
                      |+.||+                                                                       ...
T Consensus       285 iK~WDl-----------------------------------------------------------------------~k~  293 (459)
T KOG0288|consen  285 IKLWDL-----------------------------------------------------------------------QKA  293 (459)
T ss_pred             hhhhhh-----------------------------------------------------------------------hhh
Confidence            555554                                                                       444


Q ss_pred             eeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECC
Q psy9182         265 QCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       265 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~  342 (486)
                      .+.+++- ....+..|...+..+++|-.|+.|++||.++..+......+. .|+++..+.+  .+++++.|..+.+.|++
T Consensus       294 ~C~kt~l-~~S~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlR  371 (459)
T KOG0288|consen  294 YCSKTVL-PGSQCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLR  371 (459)
T ss_pred             heecccc-ccccccceEecceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecc
Confidence            4433332 122334444446678888899999999999999988887754 8888887644  78888999999999999


Q ss_pred             CCCceeeEEee---ecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc--cEEEEEeC--CCEEEEEeC
Q psy9182         343 SPNEITLRRVL---VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR--GIACLQYR--DRLVVSGSS  415 (486)
Q Consensus       343 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~--~~~l~~~~~  415 (486)
                      +.+........   .++.-.-..+++++.|+++|+.||.|+||++.++++...+.....  .|++++|+  |..+++++.
T Consensus       372 t~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk  451 (459)
T KOG0288|consen  372 TKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADK  451 (459)
T ss_pred             cccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccC
Confidence            87765443321   223323334455999999999999999999999999998886554  59999996  899999999


Q ss_pred             CCcEEEE
Q psy9182         416 DNTIRLW  422 (486)
Q Consensus       416 dg~v~iw  422 (486)
                      ++.+.+|
T Consensus       452 ~~~v~lW  458 (459)
T KOG0288|consen  452 QKAVTLW  458 (459)
T ss_pred             CcceEec
Confidence            9999999

>KOG2048|consensus

Probab=99.91  E-value=2e-21  Score=179.34  Aligned_cols=278  Identities=19%  Similarity=0.312  Sum_probs=222.1

Q ss_pred             ccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEE
Q psy9182         146 KRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQ  225 (486)
Q Consensus       146 ~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (486)
                      ..+|.+++|+               .+.+.||.+-.||.|.+|+++..                       |    +...
T Consensus        25 Ps~I~slA~s---------------~kS~~lAvsRt~g~IEiwN~~~~-----------------------w----~~~~   62 (691)
T KOG2048|consen   25 PSEIVSLAYS---------------HKSNQLAVSRTDGNIEIWNLSNN-----------------------W----FLEP   62 (691)
T ss_pred             ccceEEEEEe---------------ccCCceeeeccCCcEEEEccCCC-----------------------c----eeeE
Confidence            4578999997               45667899999999999998541                       1    2222


Q ss_pred             EEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC
Q psy9182         226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       226 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      .+..........+|++ ++.+|++.+.+|.|.-||+.+++....+....+.|.+++.  .+..++.|+.||.+..++...
T Consensus        63 vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p  141 (691)
T KOG2048|consen   63 VIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGP  141 (691)
T ss_pred             EEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCC
Confidence            3333334445555665 6788999999999999999999999999999999999888  568899999999888888887


Q ss_pred             CcEEEE--ecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeE-----EeeecCcccEEEEEe-CCCEEEEE
Q psy9182         304 GEMVNT--LIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLR-----RVLVGHRAAVNVVDF-DEKYIVSA  373 (486)
Q Consensus       304 ~~~~~~--~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~~~~~v~~~~~-~~~~l~~~  373 (486)
                      ++....  +...++.+.++.|+++  .++.|+.||.|++||..++......     ....+...-|.++.+ ....+++|
T Consensus       142 ~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sg  221 (691)
T KOG2048|consen  142 DKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASG  221 (691)
T ss_pred             ceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEe
Confidence            766543  4455789999999976  5899999999999999998766521     112224455667776 78899999


Q ss_pred             eCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee----eEEecCcccCeEEEEecC
Q psy9182         374 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRFDA  447 (486)
Q Consensus       374 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~h~~~v~~~~~~~  447 (486)
                      ...|+|.+||...+.+++.+..|...|.|++..  ++++++++.|+.|.-|...++..    ......|...|.+++.-+
T Consensus       222 DS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~  301 (691)
T KOG2048|consen  222 DSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE  301 (691)
T ss_pred             cCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeec
Confidence            999999999999999999999999999999884  68999999999999998876533    233457888999999977


Q ss_pred             CEEEEEeCCCcEEEEeCCC
Q psy9182         448 KRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       448 ~~l~s~~~dg~v~iwdl~~  466 (486)
                      ..|++||.|..+.+=....
T Consensus       302 ~~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  302 NALISGGRDFTLAICSSRE  320 (691)
T ss_pred             ceEEecceeeEEEEccccc
Confidence            7999999999998876654

>KOG1036|consensus

Probab=99.91  E-value=2.7e-22  Score=168.33  Aligned_cols=230  Identities=18%  Similarity=0.296  Sum_probs=181.1

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      .-+.+++.++.|++++.||.+++||.........++ |..++.+.+| +...+++|+.||.|+.+|+.+++.. .+..|.
T Consensus        17 S~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~-~igth~   94 (323)
T KOG1036|consen   17 SSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED-QIGTHD   94 (323)
T ss_pred             eeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCcce-eeccCC
Confidence            334455677888999999999999999886666665 8899999999 7889999999999999999987654 556789


Q ss_pred             ccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         315 EAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       315 ~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      ..+.++.+.  .+.+++|+.|+.|++||.+......    .......|.+++..++.|++|+.+..+.+||+++.....+
T Consensus        95 ~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~----~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~~~q  170 (323)
T KOG1036|consen   95 EGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG----TFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLDEPFQ  170 (323)
T ss_pred             CceEEEEeeccCCeEEEcccCccEEEEecccccccc----ccccCceEEEEeccCCEEEEeecCceEEEEEcccccchhh
Confidence            999999998  5799999999999999998643221    1123448999999999999999999999999998765443


Q ss_pred             EcC--CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCC----eeeEEecCcc---------cCeEEEEecC--CEEEEE
Q psy9182         393 LNG--HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG----ACLRVLEGHE---------ELVRCIRFDA--KRIVSG  453 (486)
Q Consensus       393 ~~~--~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~h~---------~~v~~~~~~~--~~l~s~  453 (486)
                      ...  -.-.+.|++.  ++.-.++++-||.|.+=.++..    +....|+.|.         -+|++|+|++  +.|+||
T Consensus       171 ~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTg  250 (323)
T KOG1036|consen  171 RRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATG  250 (323)
T ss_pred             hccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEec
Confidence            322  2234455554  5677888999999988766654    3445666664         2799999954  469999


Q ss_pred             eCCCcEEEEeCCCCCCCC
Q psy9182         454 AYDGKIKVWNLVAALDPR  471 (486)
Q Consensus       454 ~~dg~v~iwdl~~~~~~~  471 (486)
                      |.||.|.+||+.+..+..
T Consensus       251 GsDG~V~~Wd~~~rKrl~  268 (323)
T KOG1036|consen  251 GSDGIVNIWDLFNRKRLK  268 (323)
T ss_pred             CCCceEEEccCcchhhhh
Confidence            999999999999876543

>KOG0772|consensus

Probab=99.91  E-value=6.3e-23  Score=183.19  Aligned_cols=289  Identities=17%  Similarity=0.282  Sum_probs=200.4

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc----ceeeec-CcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE----FVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~----~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      +.+...|.++.+.|.|-+|++|+.|.+|+.||.....    ..+.|. .....|.+++|+               ..+.+
T Consensus       164 ~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys---------------~Tg~~  228 (641)
T KOG0772|consen  164 KHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYS---------------VTGDQ  228 (641)
T ss_pred             cCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeec---------------CCCCe
Confidence            3455678899999999999999999999999987543    222222 223378889987               34455


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE--EEe-CCCEEEEEec
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC--LQY-DDHKIVSGLR  252 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~-~~~~l~~~~~  252 (486)
                      |+..+.....+++|-+.....                   ....+...+..+...++|...+.|  ++| +...+++++.
T Consensus       229 iLvvsg~aqakl~DRdG~~~~-------------------e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~  289 (641)
T KOG0772|consen  229 ILVVSGSAQAKLLDRDGFEIV-------------------EFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSY  289 (641)
T ss_pred             EEEEecCcceeEEccCCceee-------------------eeeccchhhhhhhccCCceeeeeccccccCcccceEEecC
Confidence            555555666777774321111                   111223333444445567666665  444 3467999999


Q ss_pred             CCeEEEEECCCce-eeEEEc-----CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE---EEEecccCc--cEEE
Q psy9182         253 DNTIKVWDRVSLQ-CIKVLT-----GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM---VNTLIHHCE--AVLH  319 (486)
Q Consensus       253 dg~i~i~d~~~~~-~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~--~i~~  319 (486)
                      ||+++|||+..-+ ..+.++     +..-.++..+|  +++.+++|+.||.|.+|+......   ...-..|..  .|++
T Consensus       290 DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Its  369 (641)
T KOG0772|consen  290 DGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITS  369 (641)
T ss_pred             CCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeE
Confidence            9999999987643 333333     22334567777  899999999999999999754321   222245555  8999


Q ss_pred             EEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeec--CcccEEEEEeCCCEEEEEeC------CCcEEEEECCCceE
Q psy9182         320 LRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVG--HRAAVNVVDFDEKYIVSASG------DRTIKVWNTSSCEF  389 (486)
Q Consensus       320 ~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~  389 (486)
                      +.|+.  ++|++-+.|+.+++||++..+.......-..  ....-.+++++.+++++|+.      .|++.+||..+...
T Consensus       370 i~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~  449 (641)
T KOG0772|consen  370 ISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDT  449 (641)
T ss_pred             EEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceee
Confidence            99984  5999999999999999998765432222111  22223344558888998863      57899999999999


Q ss_pred             EEEEcCCcccEEEEEeCC--CEEEEEeCCCcEEEEE
Q psy9182         390 VRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWD  423 (486)
Q Consensus       390 ~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd  423 (486)
                      +..+.-....|..+.|+.  +.|++|+.||.++||=
T Consensus       450 v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  450 VYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             EEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence            999998888899999985  4588889999999874

>KOG2445|consensus

Probab=99.91  E-value=8.9e-22  Score=165.05  Aligned_cols=233  Identities=18%  Similarity=0.355  Sum_probs=180.2

Q ss_pred             CccceEE--EEeCCCEEEEEecCCeEEEEECCC----ceeeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECC
Q psy9182         233 NSKGVYC--LQYDDHKIVSGLRDNTIKVWDRVS----LQCIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       233 ~~~~v~~--~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~  302 (486)
                      |..-+.+  +.+.|+++|+++.|++|+|||...    ..+....+.|.+.|..+.|    -|+.+++++.|+++.||.-.
T Consensus        12 h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~   91 (361)
T KOG2445|consen   12 HKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQ   91 (361)
T ss_pred             CcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeec
Confidence            3334444  455799999999999999999543    4567788899999999999    48999999999999999752


Q ss_pred             C---------CcEEEEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeE---E-------eeecCccc
Q psy9182         303 T---------GEMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLR---R-------VLVGHRAA  359 (486)
Q Consensus       303 ~---------~~~~~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~---~-------~~~~~~~~  359 (486)
                      .         .....++......|+++.|.|.    .+++++.||.++||+....-.+...   .       ....+...
T Consensus        92 ~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~  171 (361)
T KOG2445|consen   92 EKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQP  171 (361)
T ss_pred             ccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCc
Confidence            1         1234556777889999999875    7899999999999997664332211   1       12235566


Q ss_pred             EEEEEe-----CCCEEEEEeCC-----CcEEEEECCC----ceEEEEEcCCcccEEEEEeCC------CEEEEEeCCCcE
Q psy9182         360 VNVVDF-----DEKYIVSASGD-----RTIKVWNTSS----CEFVRTLNGHKRGIACLQYRD------RLVVSGSSDNTI  419 (486)
Q Consensus       360 v~~~~~-----~~~~l~~~~~d-----~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~v  419 (486)
                      ..|+.|     ...+|++|+.+     +.++||....    ...+.++.+|..+|+.++|.+      .+||+++.|| |
T Consensus       172 ~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v  250 (361)
T KOG2445|consen  172 CFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-V  250 (361)
T ss_pred             ceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-E
Confidence            778888     34678888765     4788887544    235667889999999999952      4799999999 9


Q ss_pred             EEEECCCC--------------------eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         420 RLWDIECG--------------------ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       420 ~iwd~~~~--------------------~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      +||.++..                    +.+..+.+|.+.|..+.|  .|..|++.|.||+||+|...-
T Consensus       251 ~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany  319 (361)
T KOG2445|consen  251 RIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY  319 (361)
T ss_pred             EEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence            99998731                    234567889999999999  899999999999999998543

>KOG0641|consensus

Probab=99.91  E-value=6.7e-21  Score=152.91  Aligned_cols=278  Identities=22%  Similarity=0.300  Sum_probs=208.5

Q ss_pred             cccccCCccCcceEEEeecCceeeecccc------ccc---------ceeeecCcccceeEEEeecceeEecCCCCceec
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTS------SCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY  170 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~------~~~---------~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~  170 (486)
                      .|.+++|.|.|.+.+.|+...+.+|-...      .+.         +.+.-+.|.+.|.|.+|+               
T Consensus        34 airav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws---------------   98 (350)
T KOG0641|consen   34 AIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWS---------------   98 (350)
T ss_pred             heeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEec---------------
Confidence            57788999999999999999999986532      111         112335789999999998               


Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe----CCCE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY----DDHK  246 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~  246 (486)
                      +++.++++|+.|.+|++-.++..........           .            .++. +.....-+||--    .+..
T Consensus        99 ~~geliatgsndk~ik~l~fn~dt~~~~g~d-----------l------------e~nm-hdgtirdl~fld~~~s~~~i  154 (350)
T KOG0641|consen   99 PCGELIATGSNDKTIKVLPFNADTCNATGHD-----------L------------EFNM-HDGTIRDLAFLDDPESGGAI  154 (350)
T ss_pred             CccCeEEecCCCceEEEEecccccccccCcc-----------e------------eeee-cCCceeeeEEecCCCcCceE
Confidence            6888899999999999987755433221110           0            0111 112222223322    2445


Q ss_pred             EEEEe-cCCeEEEEECCCceeeEEEcCCcccEEEE-EecCCEEEEEeCCCcEEEEECCCCcEEEEecc-------cCccE
Q psy9182         247 IVSGL-RDNTIKVWDRVSLQCIKVLTGHTGSVLCL-QYDERVIISGSSDSTVRVWDVNTGEMVNTLIH-------HCEAV  317 (486)
Q Consensus       247 l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------~~~~i  317 (486)
                      |++++ .|..|++-|...|+....+.+|.+.|.++ +|++-++++|+.|.+|++||++-..++..+..       ....|
T Consensus       155 l~s~gagdc~iy~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessav  234 (350)
T KOG0641|consen  155 LASAGAGDCKIYITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAV  234 (350)
T ss_pred             EEecCCCcceEEEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCccccee
Confidence            66544 56688888999999999999999999887 67999999999999999999998888887732       23567


Q ss_pred             EEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc----eE
Q psy9182         318 LHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC----EF  389 (486)
Q Consensus       318 ~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~----~~  389 (486)
                      .+++..|  .++++|-.|....+||++.++.+   +.+..|...|.++.|  ...|+++++.|..|++-|+...    -+
T Consensus       235 aav~vdpsgrll~sg~~dssc~lydirg~r~i---q~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~  311 (350)
T KOG0641|consen  235 AAVAVDPSGRLLASGHADSSCMLYDIRGGRMI---QRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELP  311 (350)
T ss_pred             EEEEECCCcceeeeccCCCceEEEEeeCCcee---eeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCc
Confidence            7777765  48999999999999999998765   566789999999999  4569999999999999998642    22


Q ss_pred             EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       390 ~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      +.....|...+..+.|+  .--+++.+.|.++.+|-+.
T Consensus       312 ~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  312 IMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             eEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            34455688888888886  3457888999999999764

>KOG0639|consensus

Probab=99.91  E-value=8.7e-23  Score=181.70  Aligned_cols=260  Identities=19%  Similarity=0.336  Sum_probs=200.7

Q ss_pred             cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc-CCCccceEEEEeCCCEEEEEe
Q psy9182         173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR-SENSKGVYCLQYDDHKIVSGL  251 (486)
Q Consensus       173 ~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~  251 (486)
                      ..++++|+ .|.|+|||+......                         .....+.|. .+.-....-+.+||+.|++|+
T Consensus       431 trhVyTgG-kgcVKVWdis~pg~k-------------------------~PvsqLdcl~rdnyiRSckL~pdgrtLivGG  484 (705)
T KOG0639|consen  431 TRHVYTGG-KGCVKVWDISQPGNK-------------------------SPVSQLDCLNRDNYIRSCKLLPDGRTLIVGG  484 (705)
T ss_pred             cceeEecC-CCeEEEeeccCCCCC-------------------------CccccccccCcccceeeeEecCCCceEEecc
Confidence            34556655 678999998553211                         112223333 233344456788999999999


Q ss_pred             cCCeEEEEECCCceeeE--EEcCCcccEEE--EEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--C
Q psy9182         252 RDNTIKVWDRVSLQCIK--VLTGHTGSVLC--LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--G  325 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~--~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~  325 (486)
                      .-.++.|||+......-  .+........+  ++.|.+..++++.||.|.|||+.+...++.+++|.+.+.|+..++  .
T Consensus       485 eastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGt  564 (705)
T KOG0639|consen  485 EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGT  564 (705)
T ss_pred             ccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCc
Confidence            99999999987755432  22222222333  444889999999999999999999999999999999999999984  4


Q ss_pred             eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                      .|.+|+-|++|+.||++.+..+...    .....|.++..  .+.++++|-.++.+.+..... .....+..|..-|.++
T Consensus       565 klWTGGlDntvRcWDlregrqlqqh----dF~SQIfSLg~cP~~dWlavGMens~vevlh~sk-p~kyqlhlheScVLSl  639 (705)
T KOG0639|consen  565 KLWTGGLDNTVRCWDLREGRQLQQH----DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSK-PEKYQLHLHESCVLSL  639 (705)
T ss_pred             eeecCCCccceeehhhhhhhhhhhh----hhhhhheecccCCCccceeeecccCcEEEEecCC-ccceeecccccEEEEE
Confidence            9999999999999999998765322    23566777766  889999999999999988654 4456777899999998


Q ss_pred             Ee--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         404 QY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       404 ~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      .|  .|+++++.+.|+.+..|...-|..+...+. .+.|.+...  |.++++||+.|....+|.+
T Consensus       640 KFa~cGkwfvStGkDnlLnawrtPyGasiFqskE-~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  640 KFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             EecccCceeeecCchhhhhhccCccccceeeccc-cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            88  499999999999999999999988877764 456776555  9999999999999998876

>KOG2096|consensus

Probab=99.91  E-value=3e-22  Score=168.61  Aligned_cols=293  Identities=19%  Similarity=0.329  Sum_probs=202.6

Q ss_pred             eeecccccccc-----eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCC
Q psy9182         128 IKVWNTSSCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGG  202 (486)
Q Consensus       128 v~iWd~~~~~~-----~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~  202 (486)
                      ..-|+.+....     +..|++|.+.|++++|+               .||++|++++.|++|++|+++.......    
T Consensus        63 ~~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~Fs---------------SdGK~lat~~~Dr~Ir~w~~~DF~~~eH----  123 (420)
T KOG2096|consen   63 NDQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFS---------------SDGKKLATISGDRSIRLWDVRDFENKEH----  123 (420)
T ss_pred             hhhhcccCCCcccchhhhhhhccCCceeeeEEc---------------CCCceeEEEeCCceEEEEecchhhhhhh----
Confidence            44455544332     34678999999999997               6899999999999999999865322110    


Q ss_pred             CCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEECCCce---ee---------EE
Q psy9182         203 GGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDRVSLQ---CI---------KV  269 (486)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~~~~---~~---------~~  269 (486)
                                          ..-+.+...+ ....+.|+||-+-+++.. ...++++|.+...+   ..         ..
T Consensus       124 --------------------r~~R~nve~d-hpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f  182 (420)
T KOG2096|consen  124 --------------------RCIRQNVEYD-HPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEF  182 (420)
T ss_pred             --------------------hHhhccccCC-CceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCccccccccccc
Confidence                                0111122223 334456777766555444 45579999653321   11         01


Q ss_pred             EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCC
Q psy9182         270 LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPN  345 (486)
Q Consensus       270 ~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~  345 (486)
                      -+.|.-.+..+-.  ++.++++++.|..|.+|+++ |+.+..+......-...+.+|  .++++++..-.|++|.+--.+
T Consensus       183 ~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~k  261 (420)
T KOG2096|consen  183 ERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTK  261 (420)
T ss_pred             chhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEecc
Confidence            1234445555444  67899999999999999998 898888876555555556665  488899999999999874322


Q ss_pred             -----ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-------ceEEEEEc----CC-cccE-EEEEe
Q psy9182         346 -----EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS-------CEFVRTLN----GH-KRGI-ACLQY  405 (486)
Q Consensus       346 -----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~----~~-~~~v-~~~~~  405 (486)
                           +......+.+|...|..++|  +...+++.+.||++++||++-       .+.++...    .. ..++ ..+++
T Consensus       262 dG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP  341 (420)
T KOG2096|consen  262 DGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSP  341 (420)
T ss_pred             CcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCC
Confidence                 22333567899999999999  678999999999999999753       12222221    11 1222 34555


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         406 RDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       406 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +++.||.+. ...+++|..++|+....+ +.|...|.+|+|  +|++++++| |..+++..
T Consensus       342 ~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  342 SGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             CCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            677776654 668999999998877666 468999999999  899999988 77888876

>KOG0264|consensus

Probab=99.90  E-value=2.8e-22  Score=176.73  Aligned_cols=233  Identities=21%  Similarity=0.404  Sum_probs=180.5

Q ss_pred             CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe-CCCEEEEE
Q psy9182         172 DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSG  250 (486)
Q Consensus       172 ~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~  250 (486)
                      +...+++.+..+.+.|||..+..........      .           ...+ ++..+.. ...-+++++ ....++++
T Consensus       136 np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~------~-----------~Pdl-~L~gH~~-eg~glsWn~~~~g~Lls~  196 (422)
T KOG0264|consen  136 NPNIVATKTSSGDVYVFDYTKHPSKPKASGE------C-----------RPDL-RLKGHEK-EGYGLSWNRQQEGTLLSG  196 (422)
T ss_pred             CCcEEEecCCCCCEEEEEeccCCCccccccc------C-----------CCce-EEEeecc-cccccccccccceeEeec
Confidence            4566888899999999998654433222110      0           0000 1111111 122234444 45679999


Q ss_pred             ecCCeEEEEECCCce-------eeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECC--CCcEEEEecccCccEE
Q psy9182         251 LRDNTIKVWDRVSLQ-------CIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVN--TGEMVNTLIHHCEAVL  318 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~-------~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~i~  318 (486)
                      +.|+.|++||+....       ....+.+|...|..++|   +..++++++.|+.+.|||++  +.++......|...+.
T Consensus       197 ~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn  276 (422)
T KOG0264|consen  197 SDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVN  276 (422)
T ss_pred             cCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCcee
Confidence            999999999986533       34677899999999999   67899999999999999999  5666777889999999


Q ss_pred             EEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCC------
Q psy9182         319 HLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSS------  386 (486)
Q Consensus       319 ~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~------  386 (486)
                      |++|++   ..||+|+.|++|.+||+++.+.  ....+.+|...|..+.|   ....|++++.|+.+.+||+..      
T Consensus       277 ~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~  354 (422)
T KOG0264|consen  277 CVAFNPFNEFILATGSADKTVALWDLRNLNK--PLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQS  354 (422)
T ss_pred             EEEeCCCCCceEEeccCCCcEEEeechhccc--CceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccC
Confidence            999986   3899999999999999998765  44778899999999999   567899999999999999864      


Q ss_pred             --------ceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECC
Q psy9182         387 --------CEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       387 --------~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~  425 (486)
                              .+++..-.||...|..++|+   ...+++.++|+.+.||.+.
T Consensus       355 ~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  355 PEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             hhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence                    13456667999999999997   4679999999999999985

>KOG2445|consensus

Probab=99.90  E-value=1.3e-21  Score=164.06  Aligned_cols=260  Identities=15%  Similarity=0.272  Sum_probs=180.7

Q ss_pred             cccccccccccCCccCcceEEEeecCceeeecccccc----cceeeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      ...|+.-+.++.|.+.|+++|||+.|++|+|||....    .+....+.|.+.|..+.|...             .=|+.
T Consensus         9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhP-------------EfGqv   75 (361)
T KOG2445|consen    9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHP-------------EFGQV   75 (361)
T ss_pred             ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCc-------------cccce
Confidence            4456677899999999999999999999999996432    345567788888888887310             11333


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                      +++++.|+++.||.=....                                                         .+..
T Consensus        76 vA~cS~Drtv~iWEE~~~~---------------------------------------------------------~~~~   98 (361)
T KOG2445|consen   76 VATCSYDRTVSIWEEQEKS---------------------------------------------------------EEAH   98 (361)
T ss_pred             EEEEecCCceeeeeecccc---------------------------------------------------------cccc
Confidence            4555555555555410000                                                         0000


Q ss_pred             EEEEECCCceeeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCC------cEEEEec-------ccCccEE
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTG------EMVNTLI-------HHCEAVL  318 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~-------~~~~~i~  318 (486)
                      =     .......++....+.|+.+.|    -|-.+++++.||.++||+.-..      .+.++++       .+.....
T Consensus        99 ~-----~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~  173 (361)
T KOG2445|consen   99 G-----RRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCF  173 (361)
T ss_pred             c-----ceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcce
Confidence            0     111233455556778888888    4678999999999999986543      2233333       3456678


Q ss_pred             EEEEcCC-----eEEEEeCC-----CcEEEEECCCCC-ceeeEEeeecCcccEEEEEeC------CCEEEEEeCCCcEEE
Q psy9182         319 HLRFSNG-----MMVTCSKD-----RSIAVWDMVSPN-EITLRRVLVGHRAAVNVVDFD------EKYIVSASGDRTIKV  381 (486)
Q Consensus       319 ~~~~~~~-----~l~~~~~d-----g~i~i~d~~~~~-~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~i  381 (486)
                      |+.|++.     .+++|+.+     +.+.||...... .......+.+|..+|+.++|.      -..||+++.|| |+|
T Consensus       174 CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I  252 (361)
T KOG2445|consen  174 CVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRI  252 (361)
T ss_pred             EEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEE
Confidence            8888754     67777766     478899876544 444556677999999999992      24799999999 999


Q ss_pred             EECCC--------------------ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECC---CCeeeEEecC
Q psy9182         382 WNTSS--------------------CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRVLEG  435 (486)
Q Consensus       382 wd~~~--------------------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~  435 (486)
                      |++..                    -+.+..+..|.+.|..+.|+  |..|++.+.||.|++|...   ..++...++.
T Consensus       253 ~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~~  331 (361)
T KOG2445|consen  253 FKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLKA  331 (361)
T ss_pred             EEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEec
Confidence            99863                    13455677999999999997  9999999999999999864   2345555543

>KOG0321|consensus

Probab=99.90  E-value=9.4e-22  Score=180.10  Aligned_cols=225  Identities=23%  Similarity=0.378  Sum_probs=153.6

Q ss_pred             EEEEEecCCeEEEEECCCceeeEE--EcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcE--------------
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKV--LTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEM--------------  306 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~--------------  306 (486)
                      .|++++.|.++++||+++.++...  +.+|...|.+++|   +...+++|+.||.|.|||++-...              
T Consensus       114 ~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~  193 (720)
T KOG0321|consen  114 LLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRH  193 (720)
T ss_pred             eEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccc
Confidence            355555566666666666555544  6677777777766   667788888888888888753210              


Q ss_pred             -------------EEEecccC----ccEEEEEEcC-CeEEEEeC-CCcEEEEECCCCCceeeEE-----eeecC---ccc
Q psy9182         307 -------------VNTLIHHC----EAVLHLRFSN-GMMVTCSK-DRSIAVWDMVSPNEITLRR-----VLVGH---RAA  359 (486)
Q Consensus       307 -------------~~~~~~~~----~~i~~~~~~~-~~l~~~~~-dg~i~i~d~~~~~~~~~~~-----~~~~~---~~~  359 (486)
                                   +.....+.    ..|+.+.|.+ +.|++++. |+.|++||+++........     ....|   ...
T Consensus       194 n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G  273 (720)
T KOG0321|consen  194 NTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVG  273 (720)
T ss_pred             cCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceee
Confidence                         01111122    2355666654 58888777 9999999998764331111     11112   233


Q ss_pred             EEEEEe--CCCEEEEEeCCCcEEEEECCCc--eEEEEEcCCccc----EEEEEeCCCEEEEEeCCCcEEEEECCCCe-ee
Q psy9182         360 VNVVDF--DEKYIVSASGDRTIKVWNTSSC--EFVRTLNGHKRG----IACLQYRDRLVVSGSSDNTIRLWDIECGA-CL  430 (486)
Q Consensus       360 v~~~~~--~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~----v~~~~~~~~~l~~~~~dg~v~iwd~~~~~-~~  430 (486)
                      +.++..  .|.+|++.+.|+.|+.||+.+.  .++..+.++...    -.++.+++.++++|+.|...++|.+.+.+ ..
T Consensus       274 ~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~  353 (720)
T KOG0321|consen  274 QVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPP  353 (720)
T ss_pred             eEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCCh
Confidence            445555  5688888888999999998863  334455544432    24667789999999999999999998754 45


Q ss_pred             EEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         431 RVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      ..+.+|.-.|++++|   +-.-+++++.|..+++|++..+...
T Consensus       354 ~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e  396 (720)
T KOG0321|consen  354 ALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEE  396 (720)
T ss_pred             hhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhh
Confidence            667899999999999   4455888899999999999776543

>KOG0300|consensus

Probab=99.90  E-value=9.1e-22  Score=165.60  Aligned_cols=240  Identities=23%  Similarity=0.455  Sum_probs=193.6

Q ss_pred             cCCCccceEEEEeC--CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC---
Q psy9182         230 RSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN---  302 (486)
Q Consensus       230 ~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~---  302 (486)
                      ..+|...+.-++.+  ...+.+++.|.+.+||.++++.|+..+.+|.+.|+++.|  .+.++++++.|++-.||...   
T Consensus       144 ~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~  223 (481)
T KOG0300|consen  144 LEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNW  223 (481)
T ss_pred             hcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcC
Confidence            34666777666653  346888999999999999999999999999999999999  57889999999999999621   


Q ss_pred             ---C------------------------------C----cEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCC
Q psy9182         303 ---T------------------------------G----EMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVS  343 (486)
Q Consensus       303 ---~------------------------------~----~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~  343 (486)
                         .                              +    .++..+.+|...|.+..|-  ++.+++++.|.+-.+||+++
T Consensus       224 ~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt  303 (481)
T KOG0300|consen  224 EVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVET  303 (481)
T ss_pred             cCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeecc
Confidence               0                              0    1334556777777777774  45999999999999999999


Q ss_pred             CCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcE
Q psy9182         344 PNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTI  419 (486)
Q Consensus       344 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v  419 (486)
                      ++.+   ..+.+|....+-++-  ..+++++.+.|.+.++||++.. ..+..|++|...|++..|. +..+++|+.|.+|
T Consensus       304 ge~v---~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTv  380 (481)
T KOG0300|consen  304 GEVV---NILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTV  380 (481)
T ss_pred             Ccee---ccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceE
Confidence            9765   677788888876665  6788999999999999999853 4577899999999999997 7889999999999


Q ss_pred             EEEECCCCe-eeEEecCcccCeEEEEe-cCC-EEEEEeCCCcEEEEeCCCCCCCCCC
Q psy9182         420 RLWDIECGA-CLRVLEGHEELVRCIRF-DAK-RIVSGAYDGKIKVWNLVAALDPRAP  473 (486)
Q Consensus       420 ~iwd~~~~~-~~~~~~~h~~~v~~~~~-~~~-~l~s~~~dg~v~iwdl~~~~~~~~~  473 (486)
                      +|||+++.+ ++.++. -.++++.++. .|. .++.--.+..|++||+....-++-|
T Consensus       381 KvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlP  436 (481)
T KOG0300|consen  381 KVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLP  436 (481)
T ss_pred             EEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCC
Confidence            999998754 555655 4567888888 444 6666677788999999987665554

>KOG0270|consensus

Probab=99.89  E-value=3.8e-22  Score=175.22  Aligned_cols=223  Identities=24%  Similarity=0.449  Sum_probs=175.8

Q ss_pred             CCCEEEEEecCCeEEEEECCCcee---e------------------EEEcCCcccEEEEEec---CCEEEEEeCCCcEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQC---I------------------KVLTGHTGSVLCLQYD---ERVIISGSSDSTVRV  298 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~---~------------------~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~v  298 (486)
                      .|+++|.|+.|..|.|||+.-...   .                  ....+|...|.+++|+   .+.|++|+.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            467999999999999999642111   0                  0123688888888884   478999999999999


Q ss_pred             EECCCCcEEEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEE
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVS  372 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~  372 (486)
                      ||+.++++...+..|...|.++.|++   ..+++|+.|++|.+.|.+........-.   ..+.|-.+.|   ....+++
T Consensus       271 WD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk---~~g~VEkv~w~~~se~~f~~  347 (463)
T KOG0270|consen  271 WDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK---FDGEVEKVAWDPHSENSFFV  347 (463)
T ss_pred             EEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE---eccceEEEEecCCCceeEEE
Confidence            99999999999999999999999985   4999999999999999996443322222   2456667777   5678899


Q ss_pred             EeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc---cCeEEEEe
Q psy9182         373 ASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE---ELVRCIRF  445 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~---~~v~~~~~  445 (486)
                      ++.||+|+-+|+++. +++.++++|..+|.+++++   ..++++++.|+.|++|++.....- ....|.   +...|+++
T Consensus       348 ~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~-~v~~~~~~~~rl~c~~~  426 (463)
T KOG0270|consen  348 STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPK-SVKEHSFKLGRLHCFAL  426 (463)
T ss_pred             ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCc-ccccccccccceeeccc
Confidence            999999999999985 8999999999999999996   678999999999999998643331 112222   23556666


Q ss_pred             ---cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         446 ---DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       446 ---~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                         ....++.||..+.++|||+.+...
T Consensus       427 ~~~~a~~la~GG~k~~~~vwd~~~~~~  453 (463)
T KOG0270|consen  427 DPDVAFTLAFGGEKAVLRVWDIFTNSP  453 (463)
T ss_pred             CCCcceEEEecCccceEEEeecccChh
Confidence               334688999999999999986543

>KOG2048|consensus

Probab=99.89  E-value=1.4e-20  Score=173.85  Aligned_cols=275  Identities=18%  Similarity=0.297  Sum_probs=213.7

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccc-eeeecCc-ccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-VRTLNGH-KRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~-~~~l~~h-~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      ...|++++++.+.+.||.+-.||.|.||++..+=. ...+.++ ...|..++|.                ++..|.+.+.
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~----------------e~~RLFS~g~   88 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA----------------EGGRLFSSGL   88 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc----------------cCCeEEeecC
Confidence            35789999999999999999999999999987543 4455655 4678899994                5667889999


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      +|+|.-||+.+........                             ..+......|+++.+..+++|+.||.+..++.
T Consensus        89 sg~i~EwDl~~lk~~~~~d-----------------------------~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~  139 (691)
T KOG2048|consen   89 SGSITEWDLHTLKQKYNID-----------------------------SNGGAIWSIAINPENTILAIGCDDGVLYDFSI  139 (691)
T ss_pred             CceEEEEecccCceeEEec-----------------------------CCCcceeEEEeCCccceEEeecCCceEEEEec
Confidence            9999999986544322111                             11233344566677889999999998888888


Q ss_pred             CCceee--EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc--------cCccEEEEEE-cCCeEE
Q psy9182         262 VSLQCI--KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH--------HCEAVLHLRF-SNGMMV  328 (486)
Q Consensus       262 ~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------~~~~i~~~~~-~~~~l~  328 (486)
                      ..++..  ..+....+.|.+++|  ++..+++|+.||.|++||...+..++....        ...-|.++.+ .++.++
T Consensus       140 ~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~  219 (691)
T KOG2048|consen  140 GPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIA  219 (691)
T ss_pred             CCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEE
Confidence            877665  345556789999999  567789999999999999999987763211        2223455555 477999


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE----EEEEcCCcccEEE
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF----VRTLNGHKRGIAC  402 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~  402 (486)
                      +|...|.|.+||...+...   +....|...|.+++.  +++++++++.|+.|..|...+.+.    ......|...+.+
T Consensus       220 sgDS~G~V~FWd~~~gTLi---qS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs  296 (691)
T KOG2048|consen  220 SGDSAGTVTFWDSIFGTLI---QSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRS  296 (691)
T ss_pred             EecCCceEEEEcccCcchh---hhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCccccee
Confidence            9999999999999888655   556678889999988  668999999999999998776533    2334578889999


Q ss_pred             EEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         403 LQYRDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       403 ~~~~~~~l~~~~~dg~v~iwd~~~  426 (486)
                      ++.-+..+++|+.|..+.+-..+.
T Consensus       297 ~av~~~~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  297 MAVIENALISGGRDFTLAICSSRE  320 (691)
T ss_pred             eeeecceEEecceeeEEEEccccc
Confidence            999888999999999999877654

>KOG1063|consensus

Probab=99.89  E-value=6.9e-20  Score=169.53  Aligned_cols=369  Identities=18%  Similarity=0.274  Sum_probs=242.4

Q ss_pred             cccccccccccCCccCcc---eEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceecc---
Q psy9182         100 KPMLQRDFISLLPNFDEK---YIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR---  171 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~---~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~---  171 (486)
                      -+.|...|.|+.+-|+.+   ++++|+.||.|++|.+....  .+.++.+|...+.|+.-..........|+.+.+|   
T Consensus        50 l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~  129 (764)
T KOG1063|consen   50 LDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVWDKQ  129 (764)
T ss_pred             ccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEeecC
Confidence            356777888888877776   89999999999999998433  4566777766665554322222222233333321   


Q ss_pred             ---------------------------------------------------------------------------Cccee
Q psy9182         172 ---------------------------------------------------------------------------DEFQI  176 (486)
Q Consensus       172 ---------------------------------------------------------------------------~~~~l  176 (486)
                                                                                                 +..+|
T Consensus       130 ~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~l  209 (764)
T KOG1063|consen  130 QDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLL  209 (764)
T ss_pred             CCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEE
Confidence                                                                                       24568


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe--CCCEEEEEecCC
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY--DDHKIVSGLRDN  254 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  254 (486)
                      +|+|.|..||+|.+.-...........................-...+..-....+|..-+.++.+  .+..|++++.|.
T Consensus       210 aS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDk  289 (764)
T KOG1063|consen  210 ASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADK  289 (764)
T ss_pred             EecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCc
Confidence            999999999999985443221111000000000000000000000111111223467777777655  556799999999


Q ss_pred             eEEEEECCCceeeE-------EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC---cEEEEecccCccEEEEEE
Q psy9182         255 TIKVWDRVSLQCIK-------VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG---EMVNTLIHHCEAVLHLRF  322 (486)
Q Consensus       255 ~i~i~d~~~~~~~~-------~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~i~~~~~  322 (486)
                      ++.+|...+..-+.       ...+.........|  +++.+++-+..|..++|-....   .+...+.+|...|.++.|
T Consensus       290 smiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W  369 (764)
T KOG1063|consen  290 SMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDW  369 (764)
T ss_pred             ceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeee
Confidence            99999765542221       12233334555556  6778999999999999983322   233345678888888888


Q ss_pred             cC--CeEEEEeCCCcEEEEECCCC--------------------------------------------------------
Q psy9182         323 SN--GMMVTCSKDRSIAVWDMVSP--------------------------------------------------------  344 (486)
Q Consensus       323 ~~--~~l~~~~~dg~i~i~d~~~~--------------------------------------------------------  344 (486)
                      +|  .++++.+.|.+-++|-.-..                                                        
T Consensus       370 ~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g  449 (764)
T KOG1063|consen  370 DPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICG  449 (764)
T ss_pred             cCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhC
Confidence            73  47777777776666532100                                                        


Q ss_pred             ----------------------Ccee-----------------------------------------eEEeeecCcccEE
Q psy9182         345 ----------------------NEIT-----------------------------------------LRRVLVGHRAAVN  361 (486)
Q Consensus       345 ----------------------~~~~-----------------------------------------~~~~~~~~~~~v~  361 (486)
                                            +...                                         ....+.+|...|.
T Consensus       450 ~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~  529 (764)
T KOG1063|consen  450 KCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVY  529 (764)
T ss_pred             ccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEE
Confidence                                  0000                                         0001446888888


Q ss_pred             EEEe--CCCEEEEEeCC-----CcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe----
Q psy9182         362 VVDF--DEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA----  428 (486)
Q Consensus       362 ~~~~--~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~----  428 (486)
                      +++.  +++++|+++..     ..|++|+..+...+..+.+|.-.|+.+.|  ++++|++.+.|+++.+|......    
T Consensus       530 ~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~  609 (764)
T KOG1063|consen  530 ALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEF  609 (764)
T ss_pred             EEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhh
Confidence            8888  58999998754     35999999999999999999999999998  48999999999999999985432    


Q ss_pred             eeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         429 CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       429 ~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      .....+.|+.-|.+..|  ++.+++|+|.|.+|++|......
T Consensus       610 ~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~  651 (764)
T KOG1063|consen  610 RFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLR  651 (764)
T ss_pred             hhccccccceEEEEcccCcccceeEEecCCceEEEEeccCch
Confidence            22346789999999999  88889999999999999998763

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=9.9e-20  Score=167.90  Aligned_cols=279  Identities=16%  Similarity=0.184  Sum_probs=191.0

Q ss_pred             ceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCccee-ecCCCCCcceeeecccccc
Q psy9182         117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI-VSSSHDDTILIWDFLNYSE  195 (486)
Q Consensus       117 ~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l-~s~s~dg~i~vWd~~~~~~  195 (486)
                      ..+++++.|+.|++||+.+++.+..+..|.. +.+++|+               +++..+ ++++.++.|++||..+...
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~---------------~dg~~l~~~~~~~~~v~~~d~~~~~~   65 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLS---------------KDGKLLYVCASDSDTIQVIDLATGEV   65 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEEC---------------CCCCEEEEEECCCCeEEEEECCCCcE
Confidence            4788999999999999999999888887653 5678886               455544 5677889999999755332


Q ss_pred             cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCc
Q psy9182         196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHT  274 (486)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~  274 (486)
                      ..                            .+..  .......+++++++.++++ ..++.|++||+.+.+.+..+..+ 
T Consensus        66 ~~----------------------------~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~-  114 (300)
T TIGR03866        66 IG----------------------------TLPS--GPDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVG-  114 (300)
T ss_pred             EE----------------------------eccC--CCCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCC-
Confidence            11                            1111  1122345678888877655 56899999999998887777632 


Q ss_pred             ccEEEEEe--cCCEEEEEeCCC-cEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEE-EeCCCcEEEEECCCCCcee
Q psy9182         275 GSVLCLQY--DERVIISGSSDS-TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVT-CSKDRSIAVWDMVSPNEIT  348 (486)
Q Consensus       275 ~~v~~~~~--~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~-~~~dg~i~i~d~~~~~~~~  348 (486)
                      ..+.++.+  +++.++++..++ .+.+||.++++....... ......+.|+++  .+++ +..++.|++||+.+++...
T Consensus       115 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~  193 (300)
T TIGR03866       115 VEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIK  193 (300)
T ss_pred             CCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeee
Confidence            23455665  788888888765 467789988877665433 233456777654  5544 4468999999999876543


Q ss_pred             eEEeee--cC--cccEEEEEe--CCCEEEE-EeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEE-eCCCc
Q psy9182         349 LRRVLV--GH--RAAVNVVDF--DEKYIVS-ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSG-SSDNT  418 (486)
Q Consensus       349 ~~~~~~--~~--~~~v~~~~~--~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~dg~  418 (486)
                      ......  .+  ......+.+  +++++++ .+.++.+.+||.++++.+..+. +...+.++.+  ++++|+++ ..+|.
T Consensus       194 ~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~  272 (300)
T TIGR03866       194 KITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSND  272 (300)
T ss_pred             eeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCe
Confidence            222110  01  111223444  7777554 4456789999999988776654 3345667777  57888776 46899


Q ss_pred             EEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         419 IRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       419 v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      |.+||+++++.+..++.. ...+.+++
T Consensus       273 i~v~d~~~~~~~~~~~~~-~~~~~~~~  298 (300)
T TIGR03866       273 VSVIDVAALKVIKSIKVG-RLPWGVVV  298 (300)
T ss_pred             EEEEECCCCcEEEEEEcc-cccceeEe
Confidence            999999999999988754 44477665

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4378|consensus

Probab=99.89  E-value=2.7e-21  Score=172.05  Aligned_cols=275  Identities=19%  Similarity=0.280  Sum_probs=206.4

Q ss_pred             ceeeecccccccceeeecCcc--cceeEEEeecc-eeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCC
Q psy9182         126 RTIKVWNTSSCEFVRTLNGHK--RGIACLQYRDR-LVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGG  202 (486)
Q Consensus       126 g~v~iWd~~~~~~~~~l~~h~--~~V~~~~~~~~-~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~  202 (486)
                      ..+++||....+....+..|.  .++..+.|+.+ .++               +++.+.|..+++|.-....  +.    
T Consensus        12 d~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lv---------------vas~~gdk~~~~~~K~g~~--~~----   70 (673)
T KOG4378|consen   12 DKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLV---------------VASMAGDKVMRIKEKDGKT--PE----   70 (673)
T ss_pred             CceEEeecccccCccccccCCCCCcceeeeccccceEE---------------EeecCCceeEEEecccCCC--Cc----
Confidence            379999998776666665543  34777777532 233               5566678888888732210  00    


Q ss_pred             CCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe
Q psy9182         203 GGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY  282 (486)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~  282 (486)
                                           +.......+....++++.....++++|+..+.|+|||++...+.+.+++|...|+++.+
T Consensus        71 ---------------------Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~Y  129 (673)
T KOG4378|consen   71 ---------------------VPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDY  129 (673)
T ss_pred             ---------------------cceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEe
Confidence                                 00111111112222222234478999999999999999988888999999999999998


Q ss_pred             --cCCEEEEEeCCCcEEEEECCCCcEEEEecccC-ccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecC
Q psy9182         283 --DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGH  356 (486)
Q Consensus       283 --~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  356 (486)
                        ...+|++++..|.|.|..+.++.....+.... ..|..+.|++.   +|.+++.+|.|.+||+.......  .....|
T Consensus       130 N~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~--~~~~~H  207 (673)
T KOG4378|consen  130 NNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIF--HASEAH  207 (673)
T ss_pred             cCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCccc--chhhhc
Confidence              56899999999999999999998888887654 44558888764   78899999999999998766443  556678


Q ss_pred             cccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-Ceee
Q psy9182         357 RAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-GACL  430 (486)
Q Consensus       357 ~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~-~~~~  430 (486)
                      ..+...++|   +..+|++.+.|..|.+||....+....+.. ..+...++|  +|.+|++|...|.|..||++. ..++
T Consensus       208 sAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv  286 (673)
T KOG4378|consen  208 SAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPV  286 (673)
T ss_pred             cCCcCcceecCCccceEEEecccceEEEeecccccccceeee-cCCcceeeecCCceEEEeecCCceEEEEecccCCCCc
Confidence            888887777   678999999999999999998776666542 234555555  699999999999999999985 4678


Q ss_pred             EEecCcccCeEEEEe
Q psy9182         431 RVLEGHEELVRCIRF  445 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~  445 (486)
                      ..+..|...|++++|
T Consensus       287 ~v~sah~~sVt~vaf  301 (673)
T KOG4378|consen  287 AVRSAHDASVTRVAF  301 (673)
T ss_pred             eEeeecccceeEEEe
Confidence            889999999999999

>KOG2055|consensus

Probab=99.89  E-value=3.2e-21  Score=170.18  Aligned_cols=282  Identities=13%  Similarity=0.250  Sum_probs=217.9

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccc--cccceeeecCcccceeEEEeecceeEecCCCCceeccCcc-eeec
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF-QIVS  178 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~--~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~-~l~s  178 (486)
                      ...+.|.++.|+|....|++|+.||+++|+.+.  +...++.+.--..+|.+..|.               ++|. .+++
T Consensus       211 ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~---------------p~G~~~i~~  275 (514)
T KOG2055|consen  211 PSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFA---------------PNGHSVIFT  275 (514)
T ss_pred             cCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeec---------------CCCceEEEe
Confidence            334688999999999999999999999999875  345677776667788888886               4555 7889


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                      ++...-+..||+.+.+........+                          .......-+.+++++++|+..+..|.|.+
T Consensus       276 s~rrky~ysyDle~ak~~k~~~~~g--------------------------~e~~~~e~FeVShd~~fia~~G~~G~I~l  329 (514)
T KOG2055|consen  276 SGRRKYLYSYDLETAKVTKLKPPYG--------------------------VEEKSMERFEVSHDSNFIAIAGNNGHIHL  329 (514)
T ss_pred             cccceEEEEeeccccccccccCCCC--------------------------cccchhheeEecCCCCeEEEcccCceEEe
Confidence            9999999999997765443332221                          11233445667899999999999999999


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCc---cEEEEEEcCCeEEEEeCC
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRFSNGMMVTCSKD  333 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~i~~~~~~~~~l~~~~~d  333 (486)
                      ....+++.+..++ -.+.|..+.|  |++.|++.+.+|.|.+||++...+++.+.....   .-.|++.++.++++|+..
T Consensus       330 LhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~  408 (514)
T KOG2055|consen  330 LHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDS  408 (514)
T ss_pred             ehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCc
Confidence            9999999998887 4577888888  789999999999999999999999998865322   223344556799999999


Q ss_pred             CcEEEEECCC---CCceeeEEeeecCcccEEEEEe--CCCEEEEEeC--CCcEEEEECCCceEEEEEcCCc---ccEEEE
Q psy9182         334 RSIAVWDMVS---PNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHK---RGIACL  403 (486)
Q Consensus       334 g~i~i~d~~~---~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~---~~v~~~  403 (486)
                      |.|.|||..+   .....+...+..-...|+++.|  +.+.|+.++.  +..+++-.+.+......+....   +.++|+
T Consensus       409 GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~  488 (514)
T KOG2055|consen  409 GIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCM  488 (514)
T ss_pred             ceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEE
Confidence            9999999654   2223334455566778999999  6778877764  6678998888877766666443   457888


Q ss_pred             EeC--CCEEEEEeCCCcEEEEECC
Q psy9182         404 QYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       404 ~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      +|+  +.+||.|..+|.|.+|.+.
T Consensus       489 aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  489 AFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             EecCCCceEEeecCCCceeeEeec
Confidence            885  7899999999999999864

>KOG1274|consensus

Probab=99.89  E-value=5.4e-21  Score=182.33  Aligned_cols=254  Identities=21%  Similarity=0.303  Sum_probs=197.9

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccc-cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~-~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      .|....+.+++.++|.+|.+++.||.|++|+...- +.-.++..+...|.+++..                 ..+|++++
T Consensus        11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~-----------------s~~f~~~s   73 (933)
T KOG1274|consen   11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY-----------------SNHFLTGS   73 (933)
T ss_pred             hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec-----------------ccceEEee
Confidence            56667888999999999999999999999997765 5555555577788888763                 34688888


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .+++|.++.+..+......                         .    +-.-+..+++++-+|+++|.|+.|-.|++.+
T Consensus        74 ~~~tv~~y~fps~~~~~iL-------------------------~----Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~  124 (933)
T KOG1274|consen   74 EQNTVLRYKFPSGEEDTIL-------------------------A----RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLN  124 (933)
T ss_pred             ccceEEEeeCCCCCcccee-------------------------e----eeeccceEEEEecCCcEEEeecCceeEEEEe
Confidence            9999999987654432111                         1    1134566778888999999999999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc-------c-CccEEEEEEcCC--eEE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH-------H-CEAVLHLRFSNG--MMV  328 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------~-~~~i~~~~~~~~--~l~  328 (486)
                      ..+....+.+.+|.++|.++.+  .+++|++.+.||.|++||+.++.+...+.+       . ...+..++|+|+  .++
T Consensus       125 ~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la  204 (933)
T KOG1274|consen  125 LDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLA  204 (933)
T ss_pred             ccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEE
Confidence            9999999999999999999999  678999999999999999999887766632       1 345667889875  899


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR  406 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  406 (486)
                      +...|+.|++|+....+.....+. ..+...+..+.|  +|.|||+++.||.|.|||.++.+.    ......|+|++|.
T Consensus       205 ~~~~d~~Vkvy~r~~we~~f~Lr~-~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~  279 (933)
T KOG1274|consen  205 VPPVDNTVKVYSRKGWELQFKLRD-KLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWK  279 (933)
T ss_pred             eeccCCeEEEEccCCceeheeecc-cccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecC
Confidence            999999999999888765433222 223333677777  899999999999999999987221    2233567777773

>KOG0302|consensus

Probab=99.88  E-value=1.8e-21  Score=167.58  Aligned_cols=198  Identities=22%  Similarity=0.419  Sum_probs=161.7

Q ss_pred             CCcccEEEEEe----cCCEEEEEeCCCcEEEEECCC----------------CcEEEEecccCccEEEEEEcC---CeEE
Q psy9182         272 GHTGSVLCLQY----DERVIISGSSDSTVRVWDVNT----------------GEMVNTLIHHCEAVLHLRFSN---GMMV  328 (486)
Q Consensus       272 ~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~----------------~~~~~~~~~~~~~i~~~~~~~---~~l~  328 (486)
                      .|.+.+..+..    +..+.++-+..|.|+|||+..                .+++.++.+|...-..+.|+|   +.++
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll  228 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL  228 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence            34444444433    445666777889999999752                346777888888889999997   4788


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCce--EEEEEcCCcccEEEE
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACL  403 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~  403 (486)
                      +|..-+.|++|...++.-..-...+.+|...|-.+.|   ....|++|+.||+|+|||++.+.  .....++|.+.|+.+
T Consensus       229 sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVI  308 (440)
T KOG0302|consen  229 SGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVI  308 (440)
T ss_pred             cCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeE
Confidence            8888899999999887654445567789999999999   66799999999999999999872  222338999999999


Q ss_pred             EeC--CCEEEEEeCCCcEEEEECCC---CeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         404 QYR--DRLVVSGSSDNTIRLWDIEC---GACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       404 ~~~--~~~l~~~~~dg~v~iwd~~~---~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      +|+  ..+||+|+.||+++|||+++   ++++..++.|..+|++|.|   +...|+++|.|.+|.+||+....+
T Consensus       309 SWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D  382 (440)
T KOG0302|consen  309 SWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD  382 (440)
T ss_pred             EccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence            997  34899999999999999975   6789999999999999999   467799999999999999987665

>KOG0269|consensus

Probab=99.88  E-value=3.4e-22  Score=186.89  Aligned_cols=227  Identities=19%  Similarity=0.339  Sum_probs=184.3

Q ss_pred             cCcceEEEeecCceeeeccccc---ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeec
Q psy9182         114 FDEKYIVSASGDRTIKVWNTSS---CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF  190 (486)
Q Consensus       114 ~~~~~l~tg~~dg~v~iWd~~~---~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~  190 (486)
                      -+.++|||++..|.|.+||+..   .+++..|..|...++++.|+.                                  
T Consensus        98 ~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~----------------------------------  143 (839)
T KOG0269|consen   98 LYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHS----------------------------------  143 (839)
T ss_pred             chhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeecc----------------------------------
Confidence            3567999999999999999986   667788999999999999852                                  


Q ss_pred             ccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEE
Q psy9182         191 LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL  270 (486)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  270 (486)
                                                                         ....+|++|+.||.|++||++..+...++
T Consensus       144 ---------------------------------------------------tep~iliSGSQDg~vK~~DlR~~~S~~t~  172 (839)
T KOG0269|consen  144 ---------------------------------------------------TEPNILISGSQDGTVKCWDLRSKKSKSTF  172 (839)
T ss_pred             ---------------------------------------------------CCccEEEecCCCceEEEEeeecccccccc
Confidence                                                               23456888888888888888888888888


Q ss_pred             cCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCC
Q psy9182         271 TGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP  344 (486)
Q Consensus       271 ~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~  344 (486)
                      .+....|..+.|   .+..++++...|.+.+||++.. ++...+..|.++|.++.|+|+  +|++|+.|+.|+|||+.+.
T Consensus       173 ~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~  252 (839)
T KOG0269|consen  173 RSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDS  252 (839)
T ss_pred             cccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCC
Confidence            888888988888   6789999999999999999865 456778899999999999986  9999999999999999876


Q ss_pred             CceeeEEeeecCcccEEEEEe---CCCEEEEEe--CCCcEEEEECCCc-eEEEEEcCCcccEEEEEeCC---CEEEEEeC
Q psy9182         345 NEITLRRVLVGHRAAVNVVDF---DEKYIVSAS--GDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYRD---RLVVSGSS  415 (486)
Q Consensus       345 ~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~--~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~---~~l~~~~~  415 (486)
                      +.....  ......++..+.|   ....|++++  .|-.|+|||++.. -+..++..|...++.+.|.+   ..+.+++.
T Consensus       253 ~~~~~~--tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sK  330 (839)
T KOG0269|consen  253 RAKPKH--TINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSK  330 (839)
T ss_pred             Ccccee--EEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecC
Confidence            543322  2234577888988   345677766  4778999999764 45678899999999999963   67889999


Q ss_pred             CCcEEEEECCCC
Q psy9182         416 DNTIRLWDIECG  427 (486)
Q Consensus       416 dg~v~iwd~~~~  427 (486)
                      ||+|..-.++++
T Consensus       331 D~tv~qh~~kna  342 (839)
T KOG0269|consen  331 DGTVLQHLFKNA  342 (839)
T ss_pred             ccHHHHhhhhcc
Confidence            998876555443

>KOG0643|consensus

Probab=99.88  E-value=2.2e-20  Score=153.73  Aligned_cols=196  Identities=21%  Similarity=0.363  Sum_probs=169.5

Q ss_pred             EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCC
Q psy9182         269 VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSP  344 (486)
Q Consensus       269 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~  344 (486)
                      .+++|..+++.+.+  +|.+|++++.|.+..+|-.-+|+.+.++.+|.+.|.++..+.  ..+++|+.|.++++||+.++
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tG   84 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETG   84 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCC
Confidence            35789999999999  799999999999999999989999999999999999988864  59999999999999999999


Q ss_pred             CceeeEEeeecCcccEEEEEe--CCCEEEEEeC-----CCcEEEEECC-------CceEEEEEcCCcccEEEEEeC--CC
Q psy9182         345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-----DRTIKVWNTS-------SCEFVRTLNGHKRGIACLQYR--DR  408 (486)
Q Consensus       345 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-----d~~i~iwd~~-------~~~~~~~~~~~~~~v~~~~~~--~~  408 (486)
                      +.+....    ...+|..+.|  +|++++....     .+.|.++|++       ..++...+..+...++..-|+  ++
T Consensus        85 k~la~~k----~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~  160 (327)
T KOG0643|consen   85 KQLATWK----TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGE  160 (327)
T ss_pred             cEEEEee----cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCC
Confidence            8765443    3566777777  7777776654     4679999988       456688888888999988886  89


Q ss_pred             EEEEEeCCCcEEEEECCCCe-eeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         409 LVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +|++|.+||.|.+||+++|+ .+...+.|...|+.|.+  |..++++++.|.+-++||+.+-.
T Consensus       161 ~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~  223 (327)
T KOG0643|consen  161 TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLE  223 (327)
T ss_pred             EEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeecccee
Confidence            99999999999999999984 55566889999999999  99999999999999999998643

>KOG2055|consensus

Probab=99.88  E-value=8.9e-21  Score=167.40  Aligned_cols=277  Identities=15%  Similarity=0.255  Sum_probs=210.7

Q ss_pred             ccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEE
Q psy9182         146 KRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQ  225 (486)
Q Consensus       146 ~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (486)
                      .++|+++.|++               ....+++++.|+++++|.++.....                          .++
T Consensus       213 ~~~I~sv~FHp---------------~~plllvaG~d~~lrifqvDGk~N~--------------------------~lq  251 (514)
T KOG2055|consen  213 HGGITSVQFHP---------------TAPLLLVAGLDGTLRIFQVDGKVNP--------------------------KLQ  251 (514)
T ss_pred             cCCceEEEecC---------------CCceEEEecCCCcEEEEEecCccCh--------------------------hhe
Confidence            35899999984               5556999999999999998543221                          111


Q ss_pred             EEeccCCCccceEEEEeCCC-EEEEEecCCeEEEEECCCceeeEE--EcCCccc-E--EEEEecCCEEEEEeCCCcEEEE
Q psy9182         226 RINCRSENSKGVYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKV--LTGHTGS-V--LCLQYDERVIISGSSDSTVRVW  299 (486)
Q Consensus       226 ~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~-v--~~~~~~~~~l~~~~~dg~i~vw  299 (486)
                      .+. ....+....++.++|. .+++++....++.||+.+.+..+.  ..++... +  ..++.++++|+..+..|.|.+.
T Consensus       252 S~~-l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lL  330 (514)
T KOG2055|consen  252 SIH-LEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLL  330 (514)
T ss_pred             eee-eccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEee
Confidence            111 1234455667888998 899999999999999988776543  3344422 2  3455589999999999999999


Q ss_pred             ECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC
Q psy9182         300 DVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR  377 (486)
Q Consensus       300 d~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~  377 (486)
                      ...+++.+..++. .+.|..+.|+.  ..+++++.+|.|.+||++............+-.+.-.|++.++.+||+|+..|
T Consensus       331 hakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~G  409 (514)
T KOG2055|consen  331 HAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSG  409 (514)
T ss_pred             hhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcc
Confidence            9999999988875 67788898874  38888888999999999998655433332233344455667999999999999


Q ss_pred             cEEEEECCC------ceEEEEEcCCcccEEEEEeC--CCEEEEEe--CCCcEEEEECCCCeeeEEecCc---ccCeEEEE
Q psy9182         378 TIKVWNTSS------CEFVRTLNGHKRGIACLQYR--DRLVVSGS--SDNTIRLWDIECGACLRVLEGH---EELVRCIR  444 (486)
Q Consensus       378 ~i~iwd~~~------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h---~~~v~~~~  444 (486)
                      .|.|||..+      .+++..+..-...|+.+.|+  .++||.+|  .+..+++-.+.+......+...   -+.|+||+
T Consensus       410 iVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~a  489 (514)
T KOG2055|consen  410 IVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMA  489 (514)
T ss_pred             eEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEE
Confidence            999999654      46677777777889999995  67777666  4788999999877666655433   35689999


Q ss_pred             e--cCCEEEEEeCCCcEEEEeCC
Q psy9182         445 F--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       445 ~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      |  .+.+|+.|..+|.|.+|.+.
T Consensus       490 FSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  490 FSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             ecCCCceEEeecCCCceeeEeec
Confidence            9  78999999999999999874

>KOG0267|consensus

Probab=99.88  E-value=1.1e-22  Score=188.70  Aligned_cols=212  Identities=26%  Similarity=0.544  Sum_probs=188.6

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL  320 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~  320 (486)
                      .++.+++|+.|..+-+|.+..-..+..+.+|..+|.++.|  +..+|++|+.+|+|++||++.++.++++.+|...+..+
T Consensus        39 s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv  118 (825)
T KOG0267|consen   39 SSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSV  118 (825)
T ss_pred             cceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCccee
Confidence            5677999999999999998888888889999999999999  56789999999999999999999999999999999999


Q ss_pred             EEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         321 RFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       321 ~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      .|+|-  +.+.|+.|+.+++||.+...+.   ....+|...+.++.+  +|++++.++.|..+++||...|+....|+.|
T Consensus       119 ~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~---~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~  195 (825)
T KOG0267|consen  119 DFHPYGEFFASGSTDTDLKIWDIRKKGCS---HTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSH  195 (825)
T ss_pred             eeccceEEeccccccccceehhhhccCce---eeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccc
Confidence            99975  7788999999999999866554   455568888888777  8999999999999999999999999999999


Q ss_pred             cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCC
Q psy9182         397 KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDG  457 (486)
Q Consensus       397 ~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg  457 (486)
                      ...+..+.++  .-++++|+.|++|++||+++-+.+...+.....|.+.+|  ++..+.+|..+.
T Consensus       196 e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  196 EGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQIS  260 (825)
T ss_pred             cccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchhh
Confidence            9999999986  567889999999999999999999988888899999999  666677665543

>KOG2096|consensus

Probab=99.88  E-value=1.2e-20  Score=158.99  Aligned_cols=285  Identities=19%  Similarity=0.285  Sum_probs=192.4

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccc-----ee-eecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VR-TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~-----~~-~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|...+++++|+.||++|||++.|++|+||++.....     ++ .+..  +.-+.+.|.+.              -..
T Consensus        83 KgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~--dhpT~V~FapD--------------c~s  146 (420)
T KOG2096|consen   83 KGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEY--DHPTRVVFAPD--------------CKS  146 (420)
T ss_pred             hccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccC--CCceEEEECCC--------------cce
Confidence            56889999999999999999999999999999876331     11 1110  12245566532              112


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE--EEeCCCEEEEEec
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC--LQYDDHKIVSGLR  252 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~  252 (486)
                      .+++.....++++|.+.....-     .. ...             ......+.....+...+..  +.-++.++++++.
T Consensus       147 ~vv~~~~g~~l~vyk~~K~~dG-----~~-~~~-------------~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~  207 (420)
T KOG2096|consen  147 VVVSVKRGNKLCVYKLVKKTDG-----SG-SHH-------------FVHIDNLEFERKHQVDIINIGIAGNAKYIMSASL  207 (420)
T ss_pred             EEEEEccCCEEEEEEeeecccC-----CC-Ccc-------------cccccccccchhcccceEEEeecCCceEEEEecC
Confidence            3455556677888887543320     00 000             0000111111223333333  3446789999999


Q ss_pred             CCeEEEEECCCceeeEEEcCCcc--cEEEEEecCCEEEEEeCCCcEEEEECC---CC-----cEEEEecccCccEEEEEE
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTG--SVLCLQYDERVIISGSSDSTVRVWDVN---TG-----EMVNTLIHHCEAVLHLRF  322 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~dg~i~vwd~~---~~-----~~~~~~~~~~~~i~~~~~  322 (486)
                      |..|.+|+++ |+.+..+.....  .-.+++++|+++++++----|++|.+-   .|     ..+..+++|...|..++|
T Consensus       208 dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aF  286 (420)
T KOG2096|consen  208 DTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAF  286 (420)
T ss_pred             CCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeee
Confidence            9999999998 888877764332  234677799999999998899999863   22     235577899999999999


Q ss_pred             cCC--eEEEEeCCCcEEEEECCCC----CceeeEEee------ecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         323 SNG--MMVTCSKDRSIAVWDMVSP----NEITLRRVL------VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       323 ~~~--~l~~~~~dg~i~i~d~~~~----~~~~~~~~~------~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      +++  .+++.+.||.+++||..-.    +.....+..      .+....-..++++|+.|+.+.. ..++++..++++..
T Consensus       287 sn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~  365 (420)
T KOG2096|consen  287 SNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDY  365 (420)
T ss_pred             CCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccc
Confidence            986  8999999999999997532    111111111      1111223455668888877654 67999999999887


Q ss_pred             EEEc-CCcccEEEEEeC--CCEEEEEeCCCcEEEEE
Q psy9182         391 RTLN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWD  423 (486)
Q Consensus       391 ~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd  423 (486)
                      ..++ .|...|++++|+  |+++++++ |..++++.
T Consensus       366 ~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  366 PELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             hhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            7776 688999999995  88888877 67788775

>KOG0650|consensus

Probab=99.87  E-value=3.8e-21  Score=174.91  Aligned_cols=305  Identities=17%  Similarity=0.278  Sum_probs=215.8

Q ss_pred             hhhcccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182          97 TYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus        97 ~~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      .++-..|...+.++...|.|.+|++|+.||+|+||.+.||.+++++.-. +.|.|++|++.             ++-. +
T Consensus       393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~-------------~~~~-v  457 (733)
T KOG0650|consen  393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPL-------------SDLC-V  457 (733)
T ss_pred             eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCC-------------CCce-e
Confidence            3344677888899999999999999999999999999999999987643 38999999853             1111 2


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE----ec
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG----LR  252 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~----~~  252 (486)
                      +..+..+.+.+-+-.-+.....                                          .+....|+.+    ..
T Consensus       458 LAvA~~~~~~ivnp~~G~~~e~------------------------------------------~~t~ell~~~~~~~~p  495 (733)
T KOG0650|consen  458 LAVAVGECVLIVNPIFGDRLEV------------------------------------------GPTKELLASAPNESEP  495 (733)
T ss_pred             EEEEecCceEEeCccccchhhh------------------------------------------cchhhhhhcCCCccCC
Confidence            2222233344433211000000                                          0001111111    23


Q ss_pred             CCeEEEEECCCce----eeEEEcCCcccEEEEEe--cCCEEEEEeCC---CcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182         253 DNTIKVWDRVSLQ----CIKVLTGHTGSVLCLQY--DERVIISGSSD---STVRVWDVNTGEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       253 dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~  323 (486)
                      ++.+..|.-...+    -+...-.|...|..+.|  .|.+|++...+   ..|.|+++........+....+.+.++.|+
T Consensus       496 ~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FH  575 (733)
T KOG0650|consen  496 DAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFH  575 (733)
T ss_pred             cccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEec
Confidence            4466777644211    13344458889999999  78999987654   568999998777766777778889999999


Q ss_pred             CC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc-eEEEEEcCCcc
Q psy9182         324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKR  398 (486)
Q Consensus       324 ~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~  398 (486)
                      |.  +|++++ ...|++||+......   ..+......|..++.  .|..|+.|+.|+.+..+|+.-. ++.+++..|..
T Consensus       576 Ps~p~lfVaT-q~~vRiYdL~kqelv---KkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~  651 (733)
T KOG0650|consen  576 PSKPYLFVAT-QRSVRIYDLSKQELV---KKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEK  651 (733)
T ss_pred             CCCceEEEEe-ccceEEEehhHHHHH---HHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhh
Confidence            75  565555 468999999875543   233334555666666  7899999999999999998754 67788999999


Q ss_pred             cEEEEEeCCC--EEEEEeCCCcEEEEECC-------C--CeeeEEecCcccC----eEEEEecC--CEEEEEeCCCcEEE
Q psy9182         399 GIACLQYRDR--LVVSGSSDNTIRLWDIE-------C--GACLRVLEGHEEL----VRCIRFDA--KRIVSGAYDGKIKV  461 (486)
Q Consensus       399 ~v~~~~~~~~--~l~~~~~dg~v~iwd~~-------~--~~~~~~~~~h~~~----v~~~~~~~--~~l~s~~~dg~v~i  461 (486)
                      .++.++++++  ++++|+.||++.||.-.       +  --++..+.+|...    |....|++  -+|+++|.||+|++
T Consensus       652 avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirl  731 (733)
T KOG0650|consen  652 AVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRL  731 (733)
T ss_pred             hhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEe
Confidence            9999999864  69999999999998642       1  1346778888765    88888955  46999999999999


Q ss_pred             E
Q psy9182         462 W  462 (486)
Q Consensus       462 w  462 (486)
                      |
T Consensus       732 f  732 (733)
T KOG0650|consen  732 F  732 (733)
T ss_pred             e
Confidence            8

>KOG1274|consensus

Probab=99.87  E-value=1e-19  Score=173.64  Aligned_cols=259  Identities=19%  Similarity=0.283  Sum_probs=200.6

Q ss_pred             cCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCce
Q psy9182         143 NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKF  222 (486)
Q Consensus       143 ~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (486)
                      .+|..+-+.++|.               +++..+++++.||.|++|+.......+..                       
T Consensus        10 yaht~G~t~i~~d---------------~~gefi~tcgsdg~ir~~~~~sd~e~P~t-----------------------   51 (933)
T KOG1274|consen   10 YAHTGGLTLICYD---------------PDGEFICTCGSDGDIRKWKTNSDEEEPET-----------------------   51 (933)
T ss_pred             hhccCceEEEEEc---------------CCCCEEEEecCCCceEEeecCCcccCCch-----------------------
Confidence            3677788888887               67788999999999999997544221111                       


Q ss_pred             eEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEE
Q psy9182         223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD  300 (486)
Q Consensus       223 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd  300 (486)
                          +   ......+.++..++.+|++|+.+++|.+|...+++.-..+....-++.++++  +|++++.|+.|-.|++.+
T Consensus        52 ----i---~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~  124 (933)
T KOG1274|consen   52 ----I---DISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLN  124 (933)
T ss_pred             ----h---hccCceeEEEeecccceEEeeccceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEe
Confidence                0   0155667888888899999999999999999888766555555567777777  678999999999999999


Q ss_pred             CCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeec----C-cccEEEEEe--CCCEEE
Q psy9182         301 VNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVG----H-RAAVNVVDF--DEKYIV  371 (486)
Q Consensus       301 ~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~-~~~v~~~~~--~~~~l~  371 (486)
                      +.+......+.+|..+|.++.|+|+  +|++.+.||.|++||+.++...........    . ...+..++|  ++..++
T Consensus       125 ~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la  204 (933)
T KOG1274|consen  125 LDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLA  204 (933)
T ss_pred             ccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEE
Confidence            9999999999999999999999865  899999999999999998765432221111    1 334555666  677888


Q ss_pred             EEeCCCcEEEEECCCceEEEEEcC--CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182         372 SASGDRTIKVWNTSSCEFVRTLNG--HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--  445 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--  445 (486)
                      ....|+.|.+|+..+++....+..  +...+.++.|  +|.|||+++.||.|.|||.++-+.    ......|.+++|  
T Consensus       205 ~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p  280 (933)
T KOG1274|consen  205 VPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKP  280 (933)
T ss_pred             eeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCC
Confidence            888999999999999998888763  3344777777  499999999999999999987222    223457888888  


Q ss_pred             cCCEE
Q psy9182         446 DAKRI  450 (486)
Q Consensus       446 ~~~~l  450 (486)
                      +.+.+
T Consensus       281 ~~n~i  285 (933)
T KOG1274|consen  281 NANAI  285 (933)
T ss_pred             CCCee
Confidence            44443

>KOG0649|consensus

Probab=99.87  E-value=3.2e-19  Score=144.96  Aligned_cols=277  Identities=16%  Similarity=0.229  Sum_probs=192.3

Q ss_pred             cccccCCccCcceEEEeecCceeeeccccc---------c-cceeeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSS---------C-EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~---------~-~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      .|.+-+.+|.+++|++|+.+|.|-+..+.+         | ..+-..++|.++|..++|.+..                 
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~-----------------   74 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDF-----------------   74 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhh-----------------
Confidence            355667789999999999999999998753         2 2345568999999999996543                 


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                      |++++ ||.|+-|.++...+....              ...|......  ......-.....+.+.|..+-++.++.|+.
T Consensus        75 Lls~g-dG~V~gw~W~E~~es~~~--------------K~lwe~~~P~--~~~~~evPeINam~ldP~enSi~~AgGD~~  137 (325)
T KOG0649|consen   75 LLSGG-DGLVYGWEWNEEEESLAT--------------KRLWEVKIPM--QVDAVEVPEINAMWLDPSENSILFAGGDGV  137 (325)
T ss_pred             eeecc-CceEEEeeehhhhhhccc--------------hhhhhhcCcc--ccCcccCCccceeEeccCCCcEEEecCCeE
Confidence            33443 588888888654432110              1111111000  000111223344556666677777779999


Q ss_pred             EEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc----------CccEEEEEEc
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH----------CEAVLHLRFS  323 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----------~~~i~~~~~~  323 (486)
                      ++.||+++|+..+++++|...|.++.-  ....+++|+.||++++||.++++.+..+...          ...|.+++.+
T Consensus       138 ~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~  217 (325)
T KOG0649|consen  138 IYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN  217 (325)
T ss_pred             EEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc
Confidence            999999999999999999999999987  4568999999999999999999988776432          2346778888


Q ss_pred             CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       324 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                      .+.+++|+ ...+.+|.++..+....+    .-...+..+.|....+++++..+.+.-|.+. |.+..........+...
T Consensus       218 edWlvCGg-Gp~lslwhLrsse~t~vf----pipa~v~~v~F~~d~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~  291 (325)
T KOG0649|consen  218 EDWLVCGG-GPKLSLWHLRSSESTCVF----PIPARVHLVDFVDDCVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSA  291 (325)
T ss_pred             CceEEecC-CCceeEEeccCCCceEEE----ecccceeEeeeecceEEEeccccceeeeeec-cEEEEeccCCccceeee
Confidence            88887765 457899999987765433    2356777888888888888887888888864 45555555544555555


Q ss_pred             EeC---CCEEEEEeCCCcEEEE
Q psy9182         404 QYR---DRLVVSGSSDNTIRLW  422 (486)
Q Consensus       404 ~~~---~~~l~~~~~dg~v~iw  422 (486)
                      +++   -+++-.++..+.+.|+
T Consensus       292 s~~~~p~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  292 SWQTSPIKFISIAGFSNKLHIL  313 (325)
T ss_pred             cccCCceEEEEecccceeeeee
Confidence            554   2344455555555554

>KOG0270|consensus

Probab=99.87  E-value=1.1e-20  Score=166.19  Aligned_cols=247  Identities=20%  Similarity=0.293  Sum_probs=178.3

Q ss_pred             CcceeecCCCCCcceeeecccccccc-cCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC---CCEE
Q psy9182         172 DEFQIVSSSHDDTILIWDFLNYSETP-IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD---DHKI  247 (486)
Q Consensus       172 ~~~~l~s~s~dg~i~vWd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l  247 (486)
                      .+++++.|+.|..|.|||++-..... ....+.         ...  +.....-.+-....+|...+.+++++   .+.|
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs---------~~s--k~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVL  259 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGS---------KAS--KKKKKKGKRSNSASGHTDAVLALSWNRNFRNVL  259 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeech---------hhh--hhhhhhcccccccccchHHHHHHHhccccceeE
Confidence            57899999999999999985432111 110000         000  00000111122234577777777775   4679


Q ss_pred             EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182         248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~  324 (486)
                      |+|+.|.+|++||+.++++..++..|...|.++.|   .+..|++|+.|++|.+.|.+........-.-.+.|-.+.|.+
T Consensus       260 aSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~  339 (463)
T KOG0270|consen  260 ASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDP  339 (463)
T ss_pred             EecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecC
Confidence            99999999999999999999999999999999999   578999999999999999985332222222256677888864


Q ss_pred             ---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceE--EEEEcCC
Q psy9182         325 ---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEF--VRTLNGH  396 (486)
Q Consensus       325 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~  396 (486)
                         ..+++++.||.|+-+|+|+...  .......|...|.++++   ...++++++.|+.+++|++..-..  +..-.-.
T Consensus       340 ~se~~f~~~tddG~v~~~D~R~~~~--~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~  417 (463)
T KOG0270|consen  340 HSENSFFVSTDDGTVYYFDIRNPGK--PVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFK  417 (463)
T ss_pred             CCceeEEEecCCceEEeeecCCCCC--ceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccccc
Confidence               5899999999999999998763  34667789999999999   457899999999999999875433  2221111


Q ss_pred             cccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeE
Q psy9182         397 KRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLR  431 (486)
Q Consensus       397 ~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~  431 (486)
                      -+...|++++   .-.++.|+..+.++|||+.+...+.
T Consensus       418 ~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  418 LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             ccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence            2335566665   4678899999999999998776543

>KOG0973|consensus

Probab=99.86  E-value=1.6e-20  Score=182.72  Aligned_cols=254  Identities=23%  Similarity=0.343  Sum_probs=186.6

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...+.|+-|++||++||+|+.|+.|.||+... .......+                                 +++.
T Consensus        67 ~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~-~~~~~~fg---------------------------------s~g~  112 (942)
T KOG0973|consen   67 DHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAE-IGSGTVFG---------------------------------STGG  112 (942)
T ss_pred             cccCceeEEEECCCCCeEeeccCcceEEEeeecc-cCCccccc---------------------------------cccc
Confidence            3556789999999999999999999999999874 11111100                                 0111


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      ...+.-|..                                 ...+.+ +.....-++++|++.++++++.|++|.|||.
T Consensus       113 ~~~vE~wk~---------------------------------~~~l~~-H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~  158 (942)
T KOG0973|consen  113 AKNVESWKV---------------------------------VSILRG-HDSDVLDVNWSPDDSLLVSVSLDNSVIIWNA  158 (942)
T ss_pred             ccccceeeE---------------------------------EEEEec-CCCccceeccCCCccEEEEecccceEEEEcc
Confidence            112222321                                 001111 1233344567789999999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEEecccC------ccEEEEEEcCC--eEEEEe
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHC------EAVLHLRFSNG--MMVTCS  331 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------~~i~~~~~~~~--~l~~~~  331 (486)
                      .+.+.++.+.+|.+.|..+.||  |+++++-+.|++|++|++.+..+.+.+..+.      .....+.|+|+  +|++..
T Consensus       159 ~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~n  238 (942)
T KOG0973|consen  159 KTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPN  238 (942)
T ss_pred             ccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchh
Confidence            9999999999999999999996  7999999999999999988877777765443      34577888876  565542


Q ss_pred             -CC---CcEEEEECCCCCceeeEEeeecCcccEEEEEeC-------CC------------EEEEEeCCCcEEEEECCCce
Q psy9182         332 -KD---RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-------EK------------YIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       332 -~d---g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~------------~l~~~~~d~~i~iwd~~~~~  388 (486)
                       .+   ..+.|.+-.   .......+.+|..++.++.|+       ..            .+|+|+.|+.|.||.....+
T Consensus       239 A~n~~~~~~~IieR~---tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~R  315 (942)
T KOG0973|consen  239 AVNGGKSTIAIIERG---TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPR  315 (942)
T ss_pred             hccCCcceeEEEecC---CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCC
Confidence             22   245555532   233446788999999999982       12            67889999999999998877


Q ss_pred             EEEEEc-CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182         389 FVRTLN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       389 ~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~  426 (486)
                      ++.... -....|..++|+  |..|+++|.||+|.++.++.
T Consensus       316 Pl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee  356 (942)
T KOG0973|consen  316 PLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEE  356 (942)
T ss_pred             chhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence            766544 345689999995  89999999999999999875

>KOG0302|consensus

Probab=99.86  E-value=4.2e-20  Score=159.19  Aligned_cols=219  Identities=25%  Similarity=0.486  Sum_probs=172.6

Q ss_pred             CCCEEEEEecCCeEEEEECCC----------------ceeeEEEcCCcccEEEEEecC---CEEEEEeCCCcEEEEECCC
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVS----------------LQCIKVLTGHTGSVLCLQYDE---RVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~----------------~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~  303 (486)
                      +..+.++-+..|.|.|||+..                .+++.++.+|...=.++.|.+   ..+++|..-+.|++|...+
T Consensus       164 ~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~  243 (440)
T KOG0302|consen  164 NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPST  243 (440)
T ss_pred             CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccccceEeeeecc
Confidence            455667778899999999642                345677888998888898843   4578888888999999988


Q ss_pred             CcEE---EEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC--CEEEEEeC
Q psy9182         304 GEMV---NTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASG  375 (486)
Q Consensus       304 ~~~~---~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~  375 (486)
                      |.-.   ..+.+|...|-.+.|+|   +.+++|+.||.|+|||++.+....... ...|...|+.++|++  .+|++|+.
T Consensus       244 g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~D  322 (440)
T KOG0302|consen  244 GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGD  322 (440)
T ss_pred             CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCceeeEEccCCcceeeecCC
Confidence            7653   34567999999999976   499999999999999999985433333 378999999999943  48999999


Q ss_pred             CCcEEEEECCC---ceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCe----------------eeEEe
Q psy9182         376 DRTIKVWNTSS---CEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGA----------------CLRVL  433 (486)
Q Consensus       376 d~~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~----------------~~~~~  433 (486)
                      ||+++|||++.   ++++..++-|..+|+++.|+   ...|++++.|..|.+||+..-.                +.+.+
T Consensus       323 dGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLL  402 (440)
T KOG0302|consen  323 DGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLL  402 (440)
T ss_pred             CceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeE
Confidence            99999999886   57889999999999999997   6789999999999999984211                11122


Q ss_pred             cCc--ccCeEEEEe---cCCEEEEEeCCCcEEEEe
Q psy9182         434 EGH--EELVRCIRF---DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       434 ~~h--~~~v~~~~~---~~~~l~s~~~dg~v~iwd  463 (486)
                      .-|  ...+..+.|   .+.+|++.+.|| +.||.
T Consensus       403 FVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  403 FVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             EEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence            234  346778888   567899999999 55553

>KOG1273|consensus

Probab=99.86  E-value=1.5e-19  Score=152.22  Aligned_cols=270  Identities=18%  Similarity=0.338  Sum_probs=178.7

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcce
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTIL  186 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~  186 (486)
                      -.|+.|++.|.+||.|+.||.|.|||+.|...-+.+.+|..+|.+++|+               +               
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS---------------~---------------   75 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWS---------------R---------------   75 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEec---------------C---------------
Confidence            5688999999999999999999999999999999999999999999986               3               


Q ss_pred             eeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCcee
Q psy9182         187 IWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC  266 (486)
Q Consensus       187 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  266 (486)
                                                                              +|+.|++++.|..|.+||+..|.+
T Consensus        76 --------------------------------------------------------dgr~LltsS~D~si~lwDl~~gs~   99 (405)
T KOG1273|consen   76 --------------------------------------------------------DGRKLLTSSRDWSIKLWDLLKGSP   99 (405)
T ss_pred             --------------------------------------------------------CCCEeeeecCCceeEEEeccCCCc
Confidence                                                                    444555555555555555555555


Q ss_pred             eEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEeccc-----CccE-EEEEE--cCCeEEEEeCCCc
Q psy9182         267 IKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHH-----CEAV-LHLRF--SNGMMVTCSKDRS  335 (486)
Q Consensus       267 ~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-----~~~i-~~~~~--~~~~l~~~~~dg~  335 (486)
                      ++.+. ..++|....|   +.+.+++.-.+..-.+.++..+  .+.+...     .+.+ .+..|  .++++++|...|.
T Consensus       100 l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk  176 (405)
T KOG1273|consen  100 LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK  176 (405)
T ss_pred             eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEecCcce
Confidence            55554 3455655555   2223333322333344444331  1111110     0011 11123  3669999999999


Q ss_pred             EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc-------eE--EEEEcC----CcccE
Q psy9182         336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC-------EF--VRTLNG----HKRGI  400 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~-------~~--~~~~~~----~~~~v  400 (486)
                      +.+||..+.+.+...+...  ...|..+.+  .|+.++.-+.|..|+.|+++.-       ++  .+.+..    -.-.-
T Consensus       177 llv~~a~t~e~vas~rits--~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~  254 (405)
T KOG1273|consen  177 LLVYDAETLECVASFRITS--VQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKK  254 (405)
T ss_pred             EEEEecchheeeeeeeech--heeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhh
Confidence            9999999887665444322  245555555  8999999999999999997631       11  111111    01112


Q ss_pred             EEEEeCCCEEEEEeC-CCcEEEEECCCCeeeEEecCcc-cCeEEEEecCCE-EEEEeCCCcEEEEeCCCC
Q psy9182         401 ACLQYRDRLVVSGSS-DNTIRLWDIECGACLRVLEGHE-ELVRCIRFDAKR-IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       401 ~~~~~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~  467 (486)
                      .|++-+|.|+++|+. ...++||....|.+++.+.|.. .....+.|+.-+ ++..-..|.|++|.....
T Consensus       255 ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~sg~v~iw~~~~~  324 (405)
T KOG1273|consen  255 CCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIASGVVYIWAVVQV  324 (405)
T ss_pred             eeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeeccCCceEEEEeecc
Confidence            344446888877764 5779999999999999999887 567789996655 233336899999997654

>KOG1517|consensus

Probab=99.86  E-value=1.7e-19  Score=174.28  Aligned_cols=289  Identities=20%  Similarity=0.312  Sum_probs=198.2

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeeecCcc---cceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~---~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      ...+.++|-...+++++..-.|+|||.+.++.+..|..+.   ..|+.+.+-+.             -|..++++++.||
T Consensus      1067 pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe-------------~D~aLlLtas~dG 1133 (1387)
T KOG1517|consen 1067 PKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINE-------------QDDALLLTASSDG 1133 (1387)
T ss_pred             CceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecc-------------cchhheeeeccCc
Confidence            3445667777889999888899999999999888887553   46777777422             3566799999999


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  263 (486)
                      .|++|+--....             ....+...|..-    ............++.+.....+|++++.-..|+|||...
T Consensus      1134 vIRIwk~y~~~~-------------~~~eLVTaw~~L----s~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~ 1196 (1387)
T KOG1517|consen 1134 VIRIWKDYADKW-------------KKPELVTAWSSL----SDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHK 1196 (1387)
T ss_pred             eEEEeccccccc-------------CCceeEEeeccc----cccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEeccc
Confidence            999998321110             011111122111    001111112234555555566677777788999999999


Q ss_pred             ceeeEEEcC-CcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCc---EEEEecccCcc--EEEEEEcC---CeEEEEe
Q psy9182         264 LQCIKVLTG-HTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGE---MVNTLIHHCEA--VLHLRFSN---GMMVTCS  331 (486)
Q Consensus       264 ~~~~~~~~~-~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~--i~~~~~~~---~~l~~~~  331 (486)
                      ..+...+.. ....|++++.   .|+.+++|..||.|++||.+...   .+...+.|...  |..+.+.+   +.+++|+
T Consensus      1197 E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs 1276 (1387)
T KOG1517|consen 1197 EQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGS 1276 (1387)
T ss_pred             ceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeec
Confidence            888877753 4456778876   57999999999999999998643   45666777776  88888875   2799999


Q ss_pred             CCCcEEEEECCCCCceeeEEeeecC--cccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC-------CcccE
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-------HKRGI  400 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v  400 (486)
                      .+|.|++||++.............-  .+..+++..  +...+|+|+. +.|.||++.. +.+..++.       ..+.+
T Consensus      1277 ~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~ 1354 (1387)
T KOG1517|consen 1277 QDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSV 1354 (1387)
T ss_pred             cCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCc
Confidence            9999999999985322222222111  224677776  6778888888 9999999864 44444432       22456


Q ss_pred             EEEEeCC--CEEEEEeCCCcEEEEECCCC
Q psy9182         401 ACLQYRD--RLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       401 ~~~~~~~--~~l~~~~~dg~v~iwd~~~~  427 (486)
                      .|+.|+.  -++|+|+.|.+|.||....+
T Consensus      1355 scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1355 SCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred             ceeeecchhHhhhhccCCceEEEeecCCc
Confidence            8888874  46888999999999987654

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.86  E-value=2.2e-18  Score=158.87  Aligned_cols=258  Identities=16%  Similarity=0.166  Sum_probs=175.0

Q ss_pred             ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEec
Q psy9182         174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLR  252 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~  252 (486)
                      ..+++++.|+.+++||+.+...                            ...+...  ......+++++++.+ ++++.
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~----------------------------~~~~~~~--~~~~~l~~~~dg~~l~~~~~~   51 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEV----------------------------TRTFPVG--QRPRGITLSKDGKLLYVCASD   51 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCce----------------------------EEEEECC--CCCCceEECCCCCEEEEEECC
Confidence            3578888999999999754321                            1112111  112335678888876 56678


Q ss_pred             CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEE-eCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      ++.|++||..+++....+..+.. +..+.+  +++.++++ ..++.+++||+++++.+..+... ..+..+.++++  .+
T Consensus        52 ~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l  129 (300)
T TIGR03866        52 SDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVG-VEPEGMAVSPDGKIV  129 (300)
T ss_pred             CCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCC-CCcceEEECCCCCEE
Confidence            89999999999988877765443 344555  67766554 56899999999988877776532 33567788754  67


Q ss_pred             EEEeCCC-cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCCceEEEEEcCCcc-----
Q psy9182         328 VTCSKDR-SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSSCEFVRTLNGHKR-----  398 (486)
Q Consensus       328 ~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~-----  398 (486)
                      +++..++ .+.+||..+.+....  ...++  ....+.+  ++++++++ ..++.|++||+++++.+..+..+..     
T Consensus       130 ~~~~~~~~~~~~~d~~~~~~~~~--~~~~~--~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~  205 (300)
T TIGR03866       130 VNTSETTNMAHFIDTKTYEIVDN--VLVDQ--RPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPE  205 (300)
T ss_pred             EEEecCCCeEEEEeCCCCeEEEE--EEcCC--CccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccc
Confidence            7776654 567789877654321  11222  2334444  78877554 4689999999999988776653211     


Q ss_pred             --cEEEEEe--CCCEEEE-EeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEE-eCCCcEEEEeCCCCC
Q psy9182         399 --GIACLQY--RDRLVVS-GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG-AYDGKIKVWNLVAAL  468 (486)
Q Consensus       399 --~v~~~~~--~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~-~~dg~v~iwdl~~~~  468 (486)
                        ....+.+  +++++++ .+.++.|.+||+++++.+..+. +...+.+++|  ++++|+++ +.+|.|++||+.+..
T Consensus       206 ~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~  282 (300)
T TIGR03866       206 AVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK  282 (300)
T ss_pred             cCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence              1223444  5776544 4557789999999888776653 3457889999  88888876 468999999999754

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1445|consensus

Probab=99.85  E-value=8.7e-20  Score=167.21  Aligned_cols=111  Identities=25%  Similarity=0.472  Sum_probs=98.5

Q ss_pred             EEEEEe---CCCEEEEEeCCCcEEEEECCCc-------eEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCC
Q psy9182         360 VNVVDF---DEKYIVSASGDRTIKVWNTSSC-------EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       360 v~~~~~---~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~  426 (486)
                      |+.+.|   |...|++++.||.|++|.+..+       .+...+.+|...|+.+.|+   .+.|++++.|.+|++||+++
T Consensus       630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~  709 (1012)
T KOG1445|consen  630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLAN  709 (1012)
T ss_pred             eeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhh
Confidence            445555   6678999999999999998653       3456788999999999997   58999999999999999999


Q ss_pred             CeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      ++....+.+|.+.|.+++|  ||+++++.+.||+|++|+-+++..|
T Consensus       710 ~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~p  755 (1012)
T KOG1445|consen  710 AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQP  755 (1012)
T ss_pred             hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCc
Confidence            9999999999999999999  9999999999999999998887654

>KOG0321|consensus

Probab=99.85  E-value=3.1e-20  Score=170.26  Aligned_cols=265  Identities=23%  Similarity=0.340  Sum_probs=181.0

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceee--ecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~--l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...|+.+.+-|...+|++++.|.++++||+++++++..  +.||...|.+++|.+              -|...|++
T Consensus        97 ~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~--------------~n~~vF~t  162 (720)
T KOG0321|consen   97 LAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMP--------------TNPAVFCT  162 (720)
T ss_pred             ccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhcc--------------CCCcceee
Confidence            55777888899999888999999999999999999998777  899999999999975              35667999


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe---
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT---  255 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~---  255 (486)
                      |+.||.|.|||+...........                                          . .-+++...+.   
T Consensus       163 GgRDg~illWD~R~n~~d~~e~~------------------------------------------~-~~~~~~~n~~ptp  199 (720)
T KOG0321|consen  163 GGRDGEILLWDCRCNGVDALEEF------------------------------------------D-NRIYGRHNTAPTP  199 (720)
T ss_pred             ccCCCcEEEEEEeccchhhHHHH------------------------------------------h-hhhhccccCCCCC
Confidence            99999999999853221100000                                          0 0001111110   


Q ss_pred             EEEEECCCceeeEEEcCCc----ccEEEEEe-cCCEEEEEeC-CCcEEEEECCCCcEEEEe--------ccc---CccEE
Q psy9182         256 IKVWDRVSLQCIKVLTGHT----GSVLCLQY-DERVIISGSS-DSTVRVWDVNTGEMVNTL--------IHH---CEAVL  318 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~----~~v~~~~~-~~~~l~~~~~-dg~i~vwd~~~~~~~~~~--------~~~---~~~i~  318 (486)
                      ...-    .+.+...+.+.    +.|+.+.| |...|++++. |+.|+|||++........        ..+   .-.+.
T Consensus       200 skp~----~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~  275 (720)
T KOG0321|consen  200 SKPL----KKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQV  275 (720)
T ss_pred             Cchh----hccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeE
Confidence            0000    00111112222    23556666 8889999888 999999999876543322        112   22345


Q ss_pred             EEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcc---cE-EEEEeCCCEEEEEeCCCcEEEEECCCceE-EE
Q psy9182         319 HLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AV-NVVDFDEKYIVSASGDRTIKVWNTSSCEF-VR  391 (486)
Q Consensus       319 ~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~v-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~  391 (486)
                      ++..+  +.++++.+.|+.|++||+....... ...+.++..   .+ ..+.+++.++++|+.|...++|.+.+.+. ..
T Consensus       276 nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP-~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~  354 (720)
T KOG0321|consen  276 NLILDSSGTYLFASCTDNSIYFYNMRSLSISP-VAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPA  354 (720)
T ss_pred             EEEecCCCCeEEEEecCCcEEEEeccccCcCc-hhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChh
Confidence            55554  4678888889999999998754321 122222221   12 24455999999999999999999988654 56


Q ss_pred             EEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCC
Q psy9182         392 TLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~  427 (486)
                      .+.+|...|+++.|.   -.-+++++.|..++||++..+
T Consensus       355 ~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  355 LLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             hhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence            677999999999995   234777899999999999643

>KOG1034|consensus

Probab=99.84  E-value=5.4e-19  Score=149.80  Aligned_cols=222  Identities=24%  Similarity=0.400  Sum_probs=174.5

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe---cccCccE
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL---IHHCEAV  317 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~i  317 (486)
                      ..++|+|+.-|.|+|.|..++++...+.+|...|..+.+   +.+++++++.|..|++||+++..++..+   .+|.+.|
T Consensus       105 ~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV  184 (385)
T KOG1034|consen  105 NPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV  184 (385)
T ss_pred             CeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence            457889999999999999999999999999999999998   5689999999999999999999998877   6799999


Q ss_pred             EEEEEcC--CeEEEEeCCCcEEEEECCCCCce-------------------------eeEEeeecCcccEEEEEeCCCEE
Q psy9182         318 LHLRFSN--GMMVTCSKDRSIAVWDMVSPNEI-------------------------TLRRVLVGHRAAVNVVDFDEKYI  370 (486)
Q Consensus       318 ~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~-------------------------~~~~~~~~~~~~v~~~~~~~~~l  370 (486)
                      .++.|+.  +.+++++.|..+++|++...+..                         .......-|...|-|+.|-|+++
T Consensus       185 LSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~i  264 (385)
T KOG1034|consen  185 LSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFI  264 (385)
T ss_pred             EEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhhe
Confidence            9999984  59999999999999999742210                         00112234777788888888999


Q ss_pred             EEEeCCCcEEEEECC-CceE-------------EEEEcCCcccEEEEEe--C--CCEEEEEeCCCcEEEEECCCCeee--
Q psy9182         371 VSASGDRTIKVWNTS-SCEF-------------VRTLNGHKRGIACLQY--R--DRLVVSGSSDNTIRLWDIECGACL--  430 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~-~~~~-------------~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~v~iwd~~~~~~~--  430 (486)
                      ++-+-++.|..|... -.+.             +.+++-....+.-+.+  +  +++||.|...|.|.+||++..++.  
T Consensus       265 lSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~  344 (385)
T KOG1034|consen  265 LSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKC  344 (385)
T ss_pred             eecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccC
Confidence            999999999999872 1221             2233333334433333  3  789999999999999999876653  


Q ss_pred             EEecCc--ccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         431 RVLEGH--EELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       431 ~~~~~h--~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .++..+  ...|...+|  |+..|+...+|++|.-||-.
T Consensus       345 ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  345 TTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            222222  346777788  99999999999999999964

>KOG0267|consensus

Probab=99.84  E-value=1.9e-21  Score=180.59  Aligned_cols=211  Identities=27%  Similarity=0.588  Sum_probs=182.2

Q ss_pred             EEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~  324 (486)
                      ++.+...-.+++||.+.      +-.|...+.++..  .++.+++|+.|..+-+|.+.....+..+.+|..+|.++.|+.
T Consensus         7 ~m~~~~~t~Lr~~~~~~------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~   80 (825)
T KOG0267|consen    7 LMKTKRATKLRVWDTRE------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDT   80 (825)
T ss_pred             cceeeeeeccccccchh------hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCc
Confidence            33444455677787543      3457777777765  678999999999999999988888888999999999999985


Q ss_pred             C--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE
Q psy9182         325 G--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI  400 (486)
Q Consensus       325 ~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v  400 (486)
                      .  ++++|+.+|.|++||+...+.+   +.+.+|...+.++.|  -+.+.+.|+.|..+.+||.+..-+.+.+.+|...+
T Consensus        81 ~E~LlaagsasgtiK~wDleeAk~v---rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv  157 (825)
T KOG0267|consen   81 SERLLAAGSASGTIKVWDLEEAKIV---RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVV  157 (825)
T ss_pred             chhhhcccccCCceeeeehhhhhhh---hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCccee
Confidence            4  8889999999999999987655   578899999999999  57788999999999999999888999999999988


Q ss_pred             EEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec--CCEEEEEeCCCcEEEEeCCC
Q psy9182         401 ACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       401 ~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .++.+  +|++++.|++|..++|||+..|+.+..|+.|...+.++.|+  .-.+++||.|++|++||+++
T Consensus       158 ~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet  227 (825)
T KOG0267|consen  158 DVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET  227 (825)
T ss_pred             EEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccce
Confidence            88776  58999999999999999999999999999999999999994  44588999999999999984

>KOG1188|consensus

Probab=99.84  E-value=1.4e-19  Score=154.21  Aligned_cols=267  Identities=19%  Similarity=0.349  Sum_probs=184.2

Q ss_pred             ceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccccc
Q psy9182         117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET  196 (486)
Q Consensus       117 ~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~  196 (486)
                      ..+|++-+.|.|+++|..+++.+..+++|...+..+.|.+.             ...                       
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~-------------ds~-----------------------   84 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISC-------------DSP-----------------------   84 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecC-------------CCC-----------------------
Confidence            57999999999999999999999999999999888888421             011                       


Q ss_pred             ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEE--EcCCc
Q psy9182         197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV--LTGHT  274 (486)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~  274 (486)
                                                                      ..+.+++.||+|++||++.......  +..+.
T Consensus        85 ------------------------------------------------h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~  116 (376)
T KOG1188|consen   85 ------------------------------------------------HGVISCSSDGTVRLWDIRSQAESARISWTQQS  116 (376)
T ss_pred             ------------------------------------------------CeeEEeccCCeEEEEEeecchhhhheeccCCC
Confidence                                                            2344555555555555554333222  22333


Q ss_pred             -ccEEEEEe--cCCEEEEEe----CCCcEEEEECCCCcE-EEEe-cccCccEEEEEEcC---CeEEEEeCCCcEEEEECC
Q psy9182         275 -GSVLCLQY--DERVIISGS----SDSTVRVWDVNTGEM-VNTL-IHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       275 -~~v~~~~~--~~~~l~~~~----~dg~i~vwd~~~~~~-~~~~-~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~  342 (486)
                       .+..|++.  .++.+++|+    .+-.|.+||++..+. +..+ ..|.+.|+++.|+|   ++|++|+.||.|.+||+.
T Consensus       117 ~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~  196 (376)
T KOG1188|consen  117 GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK  196 (376)
T ss_pred             CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence             34456665  455666653    356799999998766 5444 67899999999975   599999999999999998


Q ss_pred             CCCceeeEEeeecCcccEEEEEeC-C--CEEEEEeCCCcEEEEECCCceEEEEEcCCc-------------ccEEEEEeC
Q psy9182         343 SPNEITLRRVLVGHRAAVNVVDFD-E--KYIVSASGDRTIKVWNTSSCEFVRTLNGHK-------------RGIACLQYR  406 (486)
Q Consensus       343 ~~~~~~~~~~~~~~~~~v~~~~~~-~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------------~~v~~~~~~  406 (486)
                      ....-........+...|..+.|- .  +.+.+-+...+..+|+++.+.....++...             .-|.+....
T Consensus       197 ~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~  276 (376)
T KOG1188|consen  197 KDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPG  276 (376)
T ss_pred             CCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCC
Confidence            765433333344577889999992 2  368888889999999999887665554321             112333332


Q ss_pred             -CCEEEEEeC-CCcEEEEECC---C---CeeeEEecC-cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         407 -DRLVVSGSS-DNTIRLWDIE---C---GACLRVLEG-HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       407 -~~~l~~~~~-dg~v~iwd~~---~---~~~~~~~~~-h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                       ....+.++. -|...++-+.   +   .+.+..+.+ |...|.++.|  .+..+.|||+||.+.+|..+.+
T Consensus       277 ~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~da  348 (376)
T KOG1188|consen  277 DKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVEDA  348 (376)
T ss_pred             CcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecCCc
Confidence             344444444 5666665443   2   344556666 6778889999  7788999999999999996443

>KOG0307|consensus

Probab=99.84  E-value=2.4e-20  Score=182.24  Aligned_cols=237  Identities=19%  Similarity=0.332  Sum_probs=183.4

Q ss_pred             ccccccCCccCcce----EEEeecCceeeeccccc---c---cceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         105 RDFISLLPNFDEKY----IVSASGDRTIKVWNTSS---C---EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       105 ~~~~~~~~s~~~~~----l~tg~~dg~v~iWd~~~---~---~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|..+++.+.|..    ||.|..||.|.+||...   +   ..+.++..|.+.|..+.|+.              ..++
T Consensus        65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~--------------~q~n  130 (1049)
T KOG0307|consen   65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNP--------------FQGN  130 (1049)
T ss_pred             ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccc--------------cCCc
Confidence            45667777776665    89999999999999764   2   35677888999999999973              2333


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      .|++|+.||.|.|||+.+.                                                             
T Consensus       131 lLASGa~~geI~iWDlnn~-------------------------------------------------------------  149 (1049)
T KOG0307|consen  131 LLASGADDGEILIWDLNKP-------------------------------------------------------------  149 (1049)
T ss_pred             eeeccCCCCcEEEeccCCc-------------------------------------------------------------
Confidence            5666666666666665431                                                             


Q ss_pred             eEEEEECCCceeeEEE--cCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCcEEEEecccCc--cEEEEEEcCC--
Q psy9182         255 TIKVWDRVSLQCIKVL--TGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE--AVLHLRFSNG--  325 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~i~~~~~~~~--  325 (486)
                                +.-...  ....+.|.+++|+   ...|++++.+|.+.|||++..+.+-.+..+..  .+..+.|+|+  
T Consensus       150 ----------~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~a  219 (1049)
T KOG0307|consen  150 ----------ETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHA  219 (1049)
T ss_pred             ----------CCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCc
Confidence                      111111  1134678899994   46899999999999999998888877765544  4678899986  


Q ss_pred             -eEEEEeCCC---cEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc
Q psy9182         326 -MMVTCSKDR---SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       326 -~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                       .+++++.|.   .|.+||++.....  .+.+.+|...|.+++|   |..++++++.|+.|.+|+.++++.+..+.....
T Consensus       220 Tql~~As~dd~~PviqlWDlR~assP--~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~n  297 (1049)
T KOG0307|consen  220 TQLLVASGDDSAPVIQLWDLRFASSP--LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGN  297 (1049)
T ss_pred             eeeeeecCCCCCceeEeecccccCCc--hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCc
Confidence             667766654   5999999876543  3566899999999999   778999999999999999999999999999889


Q ss_pred             cEEEEEeC---CCEEEEEeCCCcEEEEECCCCe
Q psy9182         399 GIACLQYR---DRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       399 ~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      .+..+.|.   ...+++++-||.|.|+.+..+.
T Consensus       298 W~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  298 WCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             ceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            99999995   5689999999999999997543

>KOG4328|consensus

Probab=99.83  E-value=1.3e-18  Score=153.63  Aligned_cols=298  Identities=18%  Similarity=0.232  Sum_probs=200.9

Q ss_pred             cccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCC
Q psy9182         131 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG  210 (486)
Q Consensus       131 Wd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~  210 (486)
                      .|+.+-......+-|.+.|++++|+|.             .+.+.+++|+.-|.|-+||+.+.....             
T Consensus       171 l~l~~~~~~~v~kv~~~Rit~l~fHPt-------------~~~~lva~GdK~G~VG~Wn~~~~~~d~-------------  224 (498)
T KOG4328|consen  171 LDLDDYRILNVAKVTDRRITSLAFHPT-------------ENRKLVAVGDKGGQVGLWNFGTQEKDK-------------  224 (498)
T ss_pred             cccccceecceeEecccceEEEEeccc-------------CcceEEEEccCCCcEEEEecCCCCCcc-------------
Confidence            344444455566778899999999863             233678999999999999985211110             


Q ss_pred             cccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC--CcccEEEEEe--cCCE
Q psy9182         211 PSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG--HTGSVLCLQY--DERV  286 (486)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~  286 (486)
                                 ........+......+.+...+...+++.+.||+|++-|++.+.....+..  ....+..+.+  +...
T Consensus       225 -----------d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~  293 (498)
T KOG4328|consen  225 -----------DGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRS  293 (498)
T ss_pred             -----------CceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCcc
Confidence                       001111111122222333333677899999999999999987654433333  3334455555  5566


Q ss_pred             EEEEeCCCcEEEEECCCCcE-EEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCcee-eEEeeecCcccEE
Q psy9182         287 IISGSSDSTVRVWDVNTGEM-VNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEIT-LRRVLVGHRAAVN  361 (486)
Q Consensus       287 l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~  361 (486)
                      ++.+..=|...+||++++.. ...+..|...|..++++|   .++++++.|++.+|||++.-.... ..-....|...|.
T Consensus       294 vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~  373 (498)
T KOG4328|consen  294 VLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVN  373 (498)
T ss_pred             EEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceee
Confidence            77777777999999998765 566677888999999986   499999999999999998754332 2344567999999


Q ss_pred             EEEe--CCCEEEEEeCCCcEEEEECC----CceEEEEEcC---CcccEE--EEEe--CCCEEEEEeCCCcEEEEECCCCe
Q psy9182         362 VVDF--DEKYIVSASGDRTIKVWNTS----SCEFVRTLNG---HKRGIA--CLQY--RDRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       362 ~~~~--~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~---~~~~v~--~~~~--~~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      +..|  ++..|++.+.|..|+|||..    ...+..++..   +...++  ...|  +..++++|-.-..|-|+|-..++
T Consensus       374 sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q  453 (498)
T KOG4328|consen  374 SAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ  453 (498)
T ss_pred             eeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence            9888  45559999999999999983    3344444431   111222  2233  57889999999999999999888


Q ss_pred             eeEEecCccc-CeEEEE-e--cCC-EEEEEeCCCcEEEEeCC
Q psy9182         429 CLRVLEGHEE-LVRCIR-F--DAK-RIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       429 ~~~~~~~h~~-~v~~~~-~--~~~-~l~s~~~dg~v~iwdl~  465 (486)
                      .+..+..... .|.++- |  -+. .++.++..|.|+||--.
T Consensus       454 ~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  454 MVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             EeeeccCccccccccceeecccccceeccCCccceEEEEecC
Confidence            8887655433 444432 3  333 55556678888888643

>KOG0307|consensus

Probab=99.83  E-value=6.3e-20  Score=179.42  Aligned_cols=222  Identities=25%  Similarity=0.472  Sum_probs=180.4

Q ss_pred             EEEEEecCCeEEEEECCCc------eeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe--cccC
Q psy9182         246 KIVSGLRDNTIKVWDRVSL------QCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL--IHHC  314 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~  314 (486)
                      .++.|..||.|.+||....      ..+.....|.+.|..+.|   .++.|++|+.||.|.|||+...+.-...  ....
T Consensus        82 lIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~  161 (1049)
T KOG0307|consen   82 LIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPP  161 (1049)
T ss_pred             eeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCc
Confidence            5889999999999997652      334566789999999999   4679999999999999999875443333  2245


Q ss_pred             ccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCC---cEEEEECC
Q psy9182         315 EAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDR---TIKVWNTS  385 (486)
Q Consensus       315 ~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~---~i~iwd~~  385 (486)
                      +.|.+++|+..   .|++++.+|.+.|||++..+.+..... ......+..+.|   +...+++++.|.   .|.+||++
T Consensus       162 ~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~-~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR  240 (1049)
T KOG0307|consen  162 SEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSD-TPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR  240 (1049)
T ss_pred             ccceEeccchhhhHHhhccCCCCCceeccccCCCccccccc-CCCccceeeeeeCCCCceeeeeecCCCCCceeEeeccc
Confidence            77999999854   899999999999999998865532222 222345778888   334566666543   59999988


Q ss_pred             C-ceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCc
Q psy9182         386 S-CEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGK  458 (486)
Q Consensus       386 ~-~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~  458 (486)
                      . ..+++.+.+|..+|.+++|.   ..+|++++.|+.|.+|+.++++.+..+......+..+.|   ++..++.++-||.
T Consensus       241 ~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgk  320 (1049)
T KOG0307|consen  241 FASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGK  320 (1049)
T ss_pred             ccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccc
Confidence            6 45678889999999999994   589999999999999999999999999988899999999   7778999999999


Q ss_pred             EEEEeCCCCC
Q psy9182         459 IKVWNLVAAL  468 (486)
Q Consensus       459 v~iwdl~~~~  468 (486)
                      |.|+.+.+..
T Consensus       321 I~I~sl~~~~  330 (1049)
T KOG0307|consen  321 ISIYSLQGTD  330 (1049)
T ss_pred             eeeeeeecCC
Confidence            9999998765

>KOG4328|consensus

Probab=99.82  E-value=1.2e-18  Score=153.96  Aligned_cols=282  Identities=18%  Similarity=0.213  Sum_probs=198.3

Q ss_pred             ccccccccccCCccCc--ceEEEeecCceeeecccccc----cceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFDE--KYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~--~~l~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..+.+.|++++|.|..  +++|+|+.-|.|-+||+.+.    .-+..+..|..+|.++.|++              .+..
T Consensus       183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P--------------~n~s  248 (498)
T KOG4328|consen  183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSP--------------ANTS  248 (498)
T ss_pred             EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecC--------------CChh
Confidence            3455778888887765  58999999999999999532    23667789999999999987              4667


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccc--eEEEEeCCCEEEEEec
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKG--VYCLQYDDHKIVSGLR  252 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~~  252 (486)
                      ++++.|.||+|++-|+++..........                             .....  .+.++.+...++.+..
T Consensus       249 ~i~ssSyDGtiR~~D~~~~i~e~v~s~~-----------------------------~d~~~fs~~d~~~e~~~vl~~~~  299 (498)
T KOG4328|consen  249 QIYSSSYDGTIRLQDFEGNISEEVLSLD-----------------------------TDNIWFSSLDFSAESRSVLFGDN  299 (498)
T ss_pred             heeeeccCceeeeeeecchhhHHHhhcC-----------------------------ccceeeeeccccCCCccEEEeec
Confidence            8999999999999998664433222110                             01111  1123345666777887


Q ss_pred             CCeEEEEECCCcee-eEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcE----EEEecccCccEEEEEEcC
Q psy9182         253 DNTIKVWDRVSLQC-IKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEM----VNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       253 dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~i~~~~~~~  324 (486)
                      =|...+||.++... ...+.-|...|..+++   ...++++++.|++.+|||++.-..    .-....|...|.+..|+|
T Consensus       300 ~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSP  379 (498)
T KOG4328|consen  300 VGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSP  379 (498)
T ss_pred             ccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcC
Confidence            78999999988654 5666778889999998   567999999999999999985432    233456888999999986


Q ss_pred             C--eEEEEeCCCcEEEEECC----CCCceeeEEeeecCccc--EEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         325 G--MMVTCSKDRSIAVWDMV----SPNEITLRRVLVGHRAA--VNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       325 ~--~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~~~~--v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      .  .|++.+.|..|+|||..    .......+.....+...  ..-..|  +..++++|..-..|-++|-..++.+..+.
T Consensus       380 s~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~  459 (498)
T KOG4328|consen  380 SGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELH  459 (498)
T ss_pred             CCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeecc
Confidence            4  89999999999999984    22222111111111111  222334  77899999999999999999998888876


Q ss_pred             CCcc-cEEEE-EeC--CC-EEEEEeCCCcEEEEECC
Q psy9182         395 GHKR-GIACL-QYR--DR-LVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       395 ~~~~-~v~~~-~~~--~~-~l~~~~~dg~v~iwd~~  425 (486)
                      .... .|.++ .++  +. +++.++..|.|+||--+
T Consensus       460 ~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  460 DPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             CccccccccceeecccccceeccCCccceEEEEecC
Confidence            5443 44433 333  44 45555567889988754

>KOG1063|consensus

Probab=99.82  E-value=3.4e-17  Score=151.99  Aligned_cols=333  Identities=18%  Similarity=0.317  Sum_probs=219.6

Q ss_pred             EEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccccccc
Q psy9182         119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPI  198 (486)
Q Consensus       119 l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~  198 (486)
                      +++-+....|.+||..+...+.++.||..+|+|+.+-+..-.            ...+++|+.|+.|.+|.++.......
T Consensus        27 ~vafGa~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~------------~a~~vsG~sD~~v~lW~l~~~~~~~i   94 (764)
T KOG1063|consen   27 LVAFGAGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEI------------VAEMVSGDSDGRVILWKLRDEYLIKI   94 (764)
T ss_pred             eEEecCCceEEEeCcccceeEEeccCCccceEEEEEcccccc------------cceEEEccCCCcEEEEEEeehheEEE
Confidence            333345679999999988788899999999999999532100            11799999999999999973333222


Q ss_pred             CCCCCCCCC-------------CCCcccccccccCceeEEEEeccCC-----CccceEEE--EeC-CC-EEEEEecCCeE
Q psy9182         199 QGGGGGGPP-------------PSGPSIENNWRMGKFLLQRINCRSE-----NSKGVYCL--QYD-DH-KIVSGLRDNTI  256 (486)
Q Consensus       199 ~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~--~~~-~~-~l~~~~~dg~i  256 (486)
                      .........             .........|+. .  ...+.+...     ...-.+|+  .++ +. .++.|+.+..|
T Consensus        95 ~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~-~--~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v  171 (764)
T KOG1063|consen   95 YTIQGHCKECVCVVARSSVMTCKAADGTVSVWDK-Q--QDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVV  171 (764)
T ss_pred             EeecCcceeEEEEEeeeeEEEeeccCceEEEeec-C--CCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEE
Confidence            222210000             001111112211 0  000000000     00000111  222 22 35667777777


Q ss_pred             EEEECCC--ceeeEEEcCCcccEEEEEe-----cCCEEEEEeCCCcEEEEECCCCc---------------------EEE
Q psy9182         257 KVWDRVS--LQCIKVLTGHTGSVLCLQY-----DERVIISGSSDSTVRVWDVNTGE---------------------MVN  308 (486)
Q Consensus       257 ~i~d~~~--~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~vwd~~~~~---------------------~~~  308 (486)
                      .++.-..  .+.+..+.||...|.+++|     +.-+|++++.|..|++|.+.-+.                     ...
T Consensus       172 ~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~  251 (764)
T KOG1063|consen  172 DLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILE  251 (764)
T ss_pred             EEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeee
Confidence            7775443  3456778899999999999     24589999999999999874222                     111


Q ss_pred             E----------ecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEe----eecCcccEEEEEe--CCCEE
Q psy9182         309 T----------LIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRV----LVGHRAAVNVVDF--DEKYI  370 (486)
Q Consensus       309 ~----------~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~~~v~~~~~--~~~~l  370 (486)
                      .          +.+|.+.|.++.|+|.  .|++++.|.++.+|...+..-+-....    ..+.........|  +++.+
T Consensus       252 ~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~i  331 (764)
T KOG1063|consen  252 EIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVI  331 (764)
T ss_pred             eEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEE
Confidence            1          2479999999999976  789999999999998876543322111    2222334555556  67779


Q ss_pred             EEEeCCCcEEEEECCC---ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC----CeeeEEecCcccCeE
Q psy9182         371 VSASGDRTIKVWNTSS---CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC----GACLRVLEGHEELVR  441 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~----~~~~~~~~~h~~~v~  441 (486)
                      ++-+..|-.++|....   ......+.+|...|..+.|+  |.+|++.+.|.+-|+|-.-.    .-.+..-+-|...++
T Consensus       332 i~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~  411 (764)
T KOG1063|consen  332 IAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLT  411 (764)
T ss_pred             EEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccce
Confidence            9989999999998333   23445667999999999997  99999999999999987641    123344456888999


Q ss_pred             EEEe-c-CCEEEEEeCCCcEEEEeCCC
Q psy9182         442 CIRF-D-AKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       442 ~~~~-~-~~~l~s~~~dg~v~iwdl~~  466 (486)
                      |++| + ...+++|.....+|+|+...
T Consensus       412 c~~~vn~~~~FVSgAdEKVlRvF~aPk  438 (764)
T KOG1063|consen  412 CLSFVNEDLQFVSGADEKVLRVFEAPK  438 (764)
T ss_pred             eeehccCCceeeecccceeeeeecCcH
Confidence            9999 5 66788988889999999653

>KOG4378|consensus

Probab=99.81  E-value=1.8e-18  Score=154.33  Aligned_cols=229  Identities=16%  Similarity=0.339  Sum_probs=170.6

Q ss_pred             eEEEEeCCCE-EEEE--ecCCeEEEEECCCc--ee--eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE
Q psy9182         237 VYCLQYDDHK-IVSG--LRDNTIKVWDRVSL--QC--IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV  307 (486)
Q Consensus       237 v~~~~~~~~~-l~~~--~~dg~i~i~d~~~~--~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~  307 (486)
                      +..+.++.+. |+++  +.|..+++|.-...  +.  +....+.  .-.|++.  ...++++|+..+.|+|||++...+.
T Consensus        37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~h  114 (673)
T KOG4378|consen   37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIH  114 (673)
T ss_pred             ceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhHHHHHh
Confidence            4444444332 4444  45678888863322  12  2222232  2344444  4579999999999999999977778


Q ss_pred             EEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEE
Q psy9182         308 NTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iw  382 (486)
                      +.+.+|...|+++.++.  .++++++..|.|.+..+.++.....+..  +....|.-+.+   ...+|.+++.+|.|.+|
T Consensus       115 r~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~--~sgqsvRll~ys~skr~lL~~asd~G~Vtlw  192 (673)
T KOG4378|consen  115 RFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTI--DSGQSVRLLRYSPSKRFLLSIASDKGAVTLW  192 (673)
T ss_pred             hhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceec--CCCCeEEEeecccccceeeEeeccCCeEEEE
Confidence            88899999999999974  4999999999999999988765443322  22334445666   34577889999999999


Q ss_pred             ECCCceEEEEE-cCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC
Q psy9182         383 NTSSCEFVRTL-NGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD  456 (486)
Q Consensus       383 d~~~~~~~~~~-~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d  456 (486)
                      |+....++..+ +.|..+...++|+   ..+|++.+.|..|.+||....+....+. ...+.++++|  +|.+|+.|+..
T Consensus       193 Dv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~  271 (673)
T KOG4378|consen  193 DVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFSECGTYLCAGNSK  271 (673)
T ss_pred             eccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeecCCceEEEeecCC
Confidence            99987776655 4788888777774   6789999999999999998776665554 4568899999  89999999999


Q ss_pred             CcEEEEeCCCCCCC
Q psy9182         457 GKIKVWNLVAALDP  470 (486)
Q Consensus       457 g~v~iwdl~~~~~~  470 (486)
                      |.|..||++....|
T Consensus       272 G~~i~YD~R~~k~P  285 (673)
T KOG4378|consen  272 GELIAYDMRSTKAP  285 (673)
T ss_pred             ceEEEEecccCCCC
Confidence            99999999987655

>KOG1273|consensus

Probab=99.81  E-value=3.5e-18  Score=144.12  Aligned_cols=233  Identities=18%  Similarity=0.300  Sum_probs=169.9

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      .....|++.|.+||+|+.||.|.|||..+...-+.+.+|..+|.+++|  ||+.|++++.|..|.+||+..|.+++.+..
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf  105 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF  105 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence            445557778999999999999999999999988999999999999999  899999999999999999999999988876


Q ss_pred             cCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEE---EEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         313 HCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV---VDFDEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       313 ~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~---~~~~~~~l~~~~~d~~i~iwd~~~  386 (486)
                       .++|....|+|.   ..++.-.+..-.+.++..+....+.....+....+.+   ..-.|+++++|...|.+.++|..+
T Consensus       106 -~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t  184 (405)
T KOG1273|consen  106 -DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET  184 (405)
T ss_pred             -cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecch
Confidence             678888888763   4555444444555565543221111111111111111   222789999999999999999999


Q ss_pred             ceEEEEEcCCc-ccEEEEEe--CCCEEEEEeCCCcEEEEECCCC----eeeEEecCc--ccCe-----EEEEe--cCCEE
Q psy9182         387 CEFVRTLNGHK-RGIACLQY--RDRLVVSGSSDNTIRLWDIECG----ACLRVLEGH--EELV-----RCIRF--DAKRI  450 (486)
Q Consensus       387 ~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~h--~~~v-----~~~~~--~~~~l  450 (486)
                      .+++..++... ..|..+.+  .|+.|+.-+.|..||.|+++.-    +-...-..|  .+-|     .++.|  +|.++
T Consensus       185 ~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv  264 (405)
T KOG1273|consen  185 LECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYV  264 (405)
T ss_pred             heeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEE
Confidence            99999888665 56666555  5999999999999999998621    100000011  1223     35566  78887


Q ss_pred             EEEeC-CCcEEEEeCCCCC
Q psy9182         451 VSGAY-DGKIKVWNLVAAL  468 (486)
Q Consensus       451 ~s~~~-dg~v~iwdl~~~~  468 (486)
                      +.++. -..++||.-..+.
T Consensus       265 ~a~s~~aHaLYIWE~~~Gs  283 (405)
T KOG1273|consen  265 CAGSARAHALYIWEKSIGS  283 (405)
T ss_pred             EeccccceeEEEEecCCcc
Confidence            77664 4569999977654

>KOG0649|consensus

Probab=99.80  E-value=1.7e-17  Score=134.99  Aligned_cols=229  Identities=18%  Similarity=0.268  Sum_probs=177.8

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCC----------ceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcE-
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVS----------LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM-  306 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-  306 (486)
                      .+++|.+++|++|..+|.|.++.+.+          ...+...++|.+++..+.|...+|++|+. |.|+-|..+.... 
T Consensus        16 qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~E~~es   94 (325)
T KOG0649|consen   16 QAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWNEEEES   94 (325)
T ss_pred             HhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccC-ceEEEeeehhhhhh
Confidence            45778899999999999999998653          22344557899999999998888888764 9999998654322 


Q ss_pred             -----EEEe--cc-----cCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE
Q psy9182         307 -----VNTL--IH-----HCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI  370 (486)
Q Consensus       307 -----~~~~--~~-----~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l  370 (486)
                           +...  ..     .-..|.++...|  +-++.++.|+.++.||+++++..   +.+.+|...+.++.-  ....+
T Consensus        95 ~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~---r~~rGHtDYvH~vv~R~~~~qi  171 (325)
T KOG0649|consen   95 LATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQ---REYRGHTDYVHSVVGRNANGQI  171 (325)
T ss_pred             ccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEE---EEEcCCcceeeeeeecccCcce
Confidence                 1111  11     123466666654  56666779999999999998644   778899999999988  45689


Q ss_pred             EEEeCCCcEEEEECCCceEEEEEcC---------C-cccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe
Q psy9182         371 VSASGDRTIKVWNTSSCEFVRTLNG---------H-KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV  440 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~~~~~~~~~~---------~-~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v  440 (486)
                      ++|+.||++++||.++++.+..+..         | ...|-+++.+..+|+.|+ ...+.+|++++.++...+. -..++
T Consensus       172 lsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlvCGg-Gp~lslwhLrsse~t~vfp-ipa~v  249 (325)
T KOG0649|consen  172 LSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLVCGG-GPKLSLWHLRSSESTCVFP-IPARV  249 (325)
T ss_pred             eecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEEecC-CCceeEEeccCCCceEEEe-cccce
Confidence            9999999999999999999888752         2 234678888889988776 5679999999988887775 34678


Q ss_pred             EEEEecCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182         441 RCIRFDAKRIVSGAYDGKIKVWNLVAALDPRA  472 (486)
Q Consensus       441 ~~~~~~~~~l~s~~~dg~v~iwdl~~~~~~~~  472 (486)
                      ..+.|+.+.+++++..+.|.-|.+..-.+...
T Consensus       250 ~~v~F~~d~vl~~G~g~~v~~~~l~Gvl~a~i  281 (325)
T KOG0649|consen  250 HLVDFVDDCVLIGGEGNHVQSYTLNGVLQANI  281 (325)
T ss_pred             eEeeeecceEEEeccccceeeeeeccEEEEec
Confidence            89999889999999888999999877655433

>KOG2919|consensus

Probab=99.80  E-value=1.3e-17  Score=141.11  Aligned_cols=259  Identities=19%  Similarity=0.298  Sum_probs=185.3

Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE-------EEeC
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC-------LQYD  243 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------~~~~  243 (486)
                      ||+..|++-+.|..+.+|++............    ..            ......+....+......|       ..|+
T Consensus        59 PDGSciL~~sedn~l~~~nlP~dlys~~~~~~----~~------------~~~~~~~r~~eg~tvydy~wYs~M~s~qP~  122 (406)
T KOG2919|consen   59 PDGSCILSLSEDNCLNCWNLPFDLYSKKADGP----LN------------FSKHLSYRYQEGETVYDYCWYSRMKSDQPS  122 (406)
T ss_pred             CCCceEEeecccCeeeEEecChhhcccCCCCc----cc------------cccceeEEeccCCEEEEEEeeeccccCCCc
Confidence            78889999999999999998433221111000    00            0000011111111111222       2356


Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcC--CcccE---EEEEe--cCCEEEEEeCCCcEEEEEC-CCCcEEEE--e---
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTG--HTGSV---LCLQY--DERVIISGSSDSTVRVWDV-NTGEMVNT--L---  310 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v---~~~~~--~~~~l~~~~~dg~i~vwd~-~~~~~~~~--~---  310 (486)
                      ..++++.+.+.-|++||..+|+....+.+  |...+   .++.|  ||..|++|. ...|+++|+ +.|.-...  .   
T Consensus       123 t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~  201 (406)
T KOG2919|consen  123 TNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTK  201 (406)
T ss_pred             cceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhc
Confidence            78899999999999999999998877654  43333   45666  899998765 578999999 55532211  1   


Q ss_pred             --cccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CCcEEEE
Q psy9182         311 --IHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DRTIKVW  382 (486)
Q Consensus       311 --~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~i~iw  382 (486)
                        .+..+.+.+++|+|   ..+++|+....+-||.-......   ..+.+|.+.|+.+.|  +|+.|++|.. |..|..|
T Consensus       202 ~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl---~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~W  278 (406)
T KOG2919|consen  202 GKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPL---QLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCW  278 (406)
T ss_pred             ccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCce---eeecccCCCeeeEEeccCcCeecccccCCCeEEEE
Confidence              23356788999986   38899999999999987776655   556699999999999  8999999874 7789999


Q ss_pred             ECCC-ceEEEEEcCCcc-cEEEEEe----CCCEEEEEeCCCcEEEEECCC-CeeeEEecCcccCeEEEEecCCE
Q psy9182         383 NTSS-CEFVRTLNGHKR-GIACLQY----RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRFDAKR  449 (486)
Q Consensus       383 d~~~-~~~~~~~~~~~~-~v~~~~~----~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~  449 (486)
                      |++. ..++..+..|.. .-..+.|    .+++|++|+.||.|++||++. |..+..+..|...++.+++++-+
T Consensus       279 DiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~m  352 (406)
T KOG2919|consen  279 DIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIM  352 (406)
T ss_pred             eehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCccc
Confidence            9986 456677777765 3333444    589999999999999999998 78788888999999999997766

>KOG1963|consensus

Probab=99.79  E-value=9.9e-17  Score=153.18  Aligned_cols=344  Identities=17%  Similarity=0.282  Sum_probs=207.9

Q ss_pred             ccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceee
Q psy9182         109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIW  188 (486)
Q Consensus       109 ~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vW  188 (486)
                      .-.+++|+++++....+ .|.|+...||+++..+.+|..++..+.+.++.            ..-.++++++.||.|++|
T Consensus        21 ~avfSnD~k~l~~~~~~-~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~------------~~~~~~~~~sl~G~I~vw   87 (792)
T KOG1963|consen   21 PAVFSNDAKFLFLCTGN-FVKVYSTATGECITSLEDHTAPLTSVIVLPSS------------ENANYLIVCSLDGTIRVW   87 (792)
T ss_pred             ccccccCCcEEEEeeCC-EEEEEecchHhhhhhcccccCccceeeecCCC------------ccceEEEEEecCccEEEe
Confidence            34678899888877654 99999999999999999999999999986431            112456677777777777


Q ss_pred             ecccccccccCCCCCCC------------------------------CCC----------------------C-Cccccc
Q psy9182         189 DFLNYSETPIQGGGGGG------------------------------PPP----------------------S-GPSIEN  215 (486)
Q Consensus       189 d~~~~~~~~~~~~~~~~------------------------------~~~----------------------~-~~~~~~  215 (486)
                      |+..+............                              ...                      . .+....
T Consensus        88 d~~~~~Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~  167 (792)
T KOG1963|consen   88 DWSDGELLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIV  167 (792)
T ss_pred             cCCCcEEEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEE
Confidence            76554322111000000                              000                      0 000000


Q ss_pred             ccccCceeE-------------------EEEeccCCCc--cceEEEEeCCCEEEEEecCCeEEEEECCC----ceeeEEE
Q psy9182         216 NWRMGKFLL-------------------QRINCRSENS--KGVYCLQYDDHKIVSGLRDNTIKVWDRVS----LQCIKVL  270 (486)
Q Consensus       216 ~~~~~~~~~-------------------~~~~~~~~~~--~~v~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~  270 (486)
                      .-..+.+..                   ........|.  ....+++|+++++++|..||.|.+|.--.    ......+
T Consensus       168 ~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~l  247 (792)
T KOG1963|consen  168 DNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLL  247 (792)
T ss_pred             EcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEE
Confidence            000000000                   0000011122  35678899999999999999999996332    1223456


Q ss_pred             cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCc
Q psy9182         271 TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNE  346 (486)
Q Consensus       271 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~  346 (486)
                      .=|...|.+++|  +|.+|++|+..|.+.+|.+.+++ .+-+..-.++|..+.++++  ..++...|+.|.+....+...
T Consensus       248 HWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~  326 (792)
T KOG1963|consen  248 HWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEI  326 (792)
T ss_pred             EecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhh
Confidence            668889999999  89999999999999999999988 4445566788999999864  777888899999987643221


Q ss_pred             eeeEEeee--------cCcccEEEEEeC--CCEEEEEeCCCcEEEEEC--------------------------------
Q psy9182         347 ITLRRVLV--------GHRAAVNVVDFD--EKYIVSASGDRTIKVWNT--------------------------------  384 (486)
Q Consensus       347 ~~~~~~~~--------~~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~--------------------------------  384 (486)
                      ......+.        ....-.+.+.+|  .+.++-.+..|.|.+||+                                
T Consensus       327 k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~  406 (792)
T KOG1963|consen  327 KSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVAR  406 (792)
T ss_pred             hhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehh
Confidence            11000000        001111111111  122333333333333333                                


Q ss_pred             -------------------------------CCce----EEEEE-cCCcccEEEEEe----CCCEEEEEeCCCcEEEEEC
Q psy9182         385 -------------------------------SSCE----FVRTL-NGHKRGIACLQY----RDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       385 -------------------------------~~~~----~~~~~-~~~~~~v~~~~~----~~~~l~~~~~dg~v~iwd~  424 (486)
                                                     ....    +...+ ..|........+    .....++++.||.++||-+
T Consensus       407 ~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~  486 (792)
T KOG1963|consen  407 SRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVF  486 (792)
T ss_pred             hccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEE
Confidence                                           2211    11111 244443333333    1337889999999999988


Q ss_pred             CCC----------eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         425 ECG----------ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       425 ~~~----------~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ...          .+...-.-|..++++.+|  || .+++.+.|++|.+||..+.
T Consensus       487 ~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG-slla~s~~~~Itiwd~~~~  540 (792)
T KOG1963|consen  487 TDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG-SLLAVSFDDTITIWDYDTK  540 (792)
T ss_pred             ecccccCcCccceEEeeeeccccCcccchhhcCCC-cEEEEecCCEEEEecCCCh
Confidence            322          232222347889999999  66 5666778999999999873

>KOG0322|consensus

Probab=99.79  E-value=5.3e-18  Score=139.58  Aligned_cols=278  Identities=15%  Similarity=0.243  Sum_probs=182.2

Q ss_pred             ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccc
Q psy9182         138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW  217 (486)
Q Consensus       138 ~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (486)
                      +...+++|.+.|+++.|.                ...+|.+|..-|.|++|++.+.........                
T Consensus         6 P~fvLRp~~~~v~s~~fq----------------a~~rL~sg~~~G~V~~w~lqt~r~~~~~r~----------------   53 (323)
T KOG0322|consen    6 PFFVLRPHSSSVTSVLFQ----------------ANERLMSGLSVGIVKMWVLQTERDLPLIRL----------------   53 (323)
T ss_pred             CeeEeccccchheehhhc----------------cchhhhcccccceEEEEEeecCccchhhhh----------------
Confidence            456677899999999984                445689999999999999866543322211                


Q ss_pred             ccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCC-c
Q psy9182         218 RMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS-T  295 (486)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg-~  295 (486)
                                    .+...+..+.. .+..+.+-+.|+.+.+|++..+..+..   |.-.+.++.|...-+...+... .
T Consensus        54 --------------~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eq  116 (323)
T KOG0322|consen   54 --------------FGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQ  116 (323)
T ss_pred             --------------hccceeeceeecCCcchhhcCCCceEEEEEccCcceEEE---eeeeccccccccceeccCCCcchh
Confidence                          11222222222 236788889999999999887655443   3333344444222222221111 1


Q ss_pred             -----------EEEEECCCCcEEEEe----cccCccEEEEEEcC---C--eEEEEeCCCcEEEEECCCCCce-------e
Q psy9182         296 -----------VRVWDVNTGEMVNTL----IHHCEAVLHLRFSN---G--MMVTCSKDRSIAVWDMVSPNEI-------T  348 (486)
Q Consensus       296 -----------i~vwd~~~~~~~~~~----~~~~~~i~~~~~~~---~--~l~~~~~dg~i~i~d~~~~~~~-------~  348 (486)
                                 +.+-|......+...    ....+.+++..+.-   .  ++++|.++|.+.+||+.++...       .
T Consensus       117 ll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~k  196 (323)
T KOG0322|consen  117 LLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSK  196 (323)
T ss_pred             heecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccc
Confidence                       222222211122211    12345566666431   1  7888999999999999886332       1


Q ss_pred             eEEeeecCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCc--eE--E--EEEcCCcccEEEEEeCCCEEEEEeCCCcEE
Q psy9182         349 LRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSC--EF--V--RTLNGHKRGIACLQYRDRLVVSGSSDNTIR  420 (486)
Q Consensus       349 ~~~~~~~~~~~v~~~~~~~--~~l~~~~~d~~i~iwd~~~~--~~--~--~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~  420 (486)
                      .......|..+|.++.++.  ..=++|+.+..+..|+++..  .+  -  ..++.....-..+..+++.+|+++.|+.||
T Consensus       197 v~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiR  276 (323)
T KOG0322|consen  197 VESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIR  276 (323)
T ss_pred             cccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEE
Confidence            2233456888999999842  34466777778888887642  21  1  222222222345666899999999999999


Q ss_pred             EEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         421 LWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       421 iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      ||+.++..++..++-|...|++++|  +.+.+|++|.|++|.+|++
T Consensus       277 Vyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  277 VYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             EEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            9999999999999999999999999  5578999999999999996

>KOG0322|consensus

Probab=99.79  E-value=1.3e-18  Score=143.13  Aligned_cols=279  Identities=17%  Similarity=0.268  Sum_probs=184.5

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      .|...++++.|..++ +|.+|..-|.|++|++.+...+..++ .|...|+.+..-                .+..+.+-+
T Consensus        12 p~~~~v~s~~fqa~~-rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~----------------p~d~l~tqg   74 (323)
T KOG0322|consen   12 PHSSSVTSVLFQANE-RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSI----------------PNDSLDTQG   74 (323)
T ss_pred             cccchheehhhccch-hhhcccccceEEEEEeecCccchhhhhhccceeeceeec----------------CCcchhhcC
Confidence            566778888888766 59999999999999999999888888 567778877763                235688999


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCC----EEEEEecCC-e
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH----KIVSGLRDN-T  255 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~l~~~~~dg-~  255 (486)
                      .|+.+.+|++.-............                .....           -.++.++++    .++.-+... .
T Consensus        75 Rd~~L~lw~ia~s~~i~i~Si~~n----------------slgFC-----------rfSl~~~~k~~eqll~yp~rgsde  127 (323)
T KOG0322|consen   75 RDPLLILWTIAYSAFISIHSIVVN----------------SLGFC-----------RFSLVKKPKNSEQLLEYPSRGSDE  127 (323)
T ss_pred             CCceEEEEEccCcceEEEeeeecc----------------ccccc-----------cceeccCCCcchhheecCCcccch
Confidence            999999999854222111100000                00000           001111111    111111100 1


Q ss_pred             EEEEECCCceeeEEE----cCCcccEEEEEe---cC--CEEEEEeCCCcEEEEECCCCcEE----------EEecccCcc
Q psy9182         256 IKVWDRVSLQCIKVL----TGHTGSVLCLQY---DE--RVIISGSSDSTVRVWDVNTGEMV----------NTLIHHCEA  316 (486)
Q Consensus       256 i~i~d~~~~~~~~~~----~~~~~~v~~~~~---~~--~~l~~~~~dg~i~vwd~~~~~~~----------~~~~~~~~~  316 (486)
                      +.+-|......+...    .+..+.++|..+   ++  -++++|..+|.+.+||+.++..+          .....|..+
T Consensus       128 ~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qp  207 (323)
T KOG0322|consen  128 THKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQP  207 (323)
T ss_pred             hhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCc
Confidence            222222222222221    134466788776   33  25677888999999999988433          334567889


Q ss_pred             EEEEEEcC--CeEEEEeCCCcEEEEECCCCC-ceeeEEeeecCcccEE--EEEeCCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         317 VLHLRFSN--GMMVTCSKDRSIAVWDMVSPN-EITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       317 i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      +.++.+.+  +.=++|+.+..+..|++.... .........-....+.  .+..|++.+|+++.|+.|++|+.++.+++.
T Consensus       208 vlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLA  287 (323)
T KOG0322|consen  208 VLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLA  287 (323)
T ss_pred             ceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchh
Confidence            99999874  355677778888888886541 1212122222223333  455599999999999999999999999999


Q ss_pred             EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182         392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~  424 (486)
                      .++-|...|.+++|+  .+++|+++.|++|.+|++
T Consensus       288 VLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  288 VLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             hhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            999999999999996  479999999999999986

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.79  E-value=4.5e-15  Score=143.89  Aligned_cols=323  Identities=33%  Similarity=0.603  Sum_probs=232.2

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc-ceeeecCccc-ceeEEEeecceeEecCCCCceeccCcc-eee
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE-FVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRYRDEF-QIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~-~~~~l~~h~~-~V~~~~~~~~~~~~~~~d~~i~~~~~~-~l~  177 (486)
                      ..+...+.++.+.+.+..++.++.|+.+.+|+...+. .+..+.++.. .+..+.+. .             .++. .++
T Consensus        62 ~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~~~~~~~~  127 (466)
T COG2319          62 RGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALS-S-------------PDGNSILL  127 (466)
T ss_pred             eeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEE-C-------------CCcceEEe
Confidence            4566778888899999999999999999999998886 6777766443 45554441 1             2333 344


Q ss_pred             c-CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCe
Q psy9182         178 S-SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNT  255 (486)
Q Consensus       178 s-~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~  255 (486)
                      . +..|+.+.+|++...                           ......+. .+......+++++++..+++++. ++.
T Consensus       128 ~~~~~d~~~~~~~~~~~---------------------------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~  179 (466)
T COG2319         128 ASSSLDGTVKLWDLSTP---------------------------GKLIRTLE-GHSESVTSLAFSPDGKLLASGSSLDGT  179 (466)
T ss_pred             ccCCCCccEEEEEecCC---------------------------CeEEEEEe-cCcccEEEEEECCCCCEEEecCCCCCc
Confidence            4 444999999997540                           01111111 11122235677778888888885 999


Q ss_pred             EEEEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCcEEE-EecccCccEEEEEEcC--CeEEE
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGEMVN-TLIHHCEAVLHLRFSN--GMMVT  329 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~i~~~~~~~--~~l~~  329 (486)
                      +++|+...+..+..+.+|...+.++.+  ++. .+++++.|+.|++||...+.... .+..|.... ...|++  ..+++
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  258 (466)
T COG2319         180 IKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLAS  258 (466)
T ss_pred             eEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEE
Confidence            999999998999999999999999998  455 45555899999999999888887 677777764 335554  47888


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEe
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQY  405 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~  405 (486)
                      ++.|+.+++|++......  ......|...+.++.+  ++..+++++.|+.+.+||..+........  .|...+..+.+
T Consensus       259 ~~~d~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (466)
T COG2319         259 GSSDGTIRLWDLRSSSSL--LRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSF  336 (466)
T ss_pred             ecCCCcEEEeeecCCCcE--EEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEE
Confidence            999999999999876651  1222677888988888  45788888888889999999887777666  77777877777


Q ss_pred             C--CCEEEEE-eCCCcEEEEECCCCeeeEEecCcccCeEEEEecC-CEEEE-EeCCCcEEEEeCCCCCC
Q psy9182         406 R--DRLVVSG-SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-KRIVS-GAYDGKIKVWNLVAALD  469 (486)
Q Consensus       406 ~--~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s-~~~dg~v~iwdl~~~~~  469 (486)
                      .  +..++.+ ..|+.+.+|+............... +..+.+.. ..++. +..++.+.+|+......
T Consensus       337 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (466)
T COG2319         337 SPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN-VLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSL  404 (466)
T ss_pred             CCCCCEEEEeecCCCcEEeeecCCCceeEEecCCce-EEEEEECCCCCEEEEecCCCceEEEecccCee
Confidence            3  1455555 6889999999988773333333322 77777722 23444 68899999999987654

>KOG2110|consensus

Probab=99.77  E-value=8.2e-16  Score=132.84  Aligned_cols=227  Identities=14%  Similarity=0.260  Sum_probs=179.7

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCC--cEEEEECCCCcEEEEecccCccE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS--TVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      +..+...|..|+.|| .++|+................|..+-|...+++..+.+.  .+++++.+.+..+..+.. ...|
T Consensus        13 ~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~f-pt~I   90 (391)
T KOG2110|consen   13 FNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIFF-PTSI   90 (391)
T ss_pred             eccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEec-CCce
Confidence            334556677888887 677776654443222233445666677888888777654  499999998888877754 5679


Q ss_pred             EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEEEe--CCCcEEEEECCCceEEEEE
Q psy9182         318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSAS--GDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~d~~i~iwd~~~~~~~~~~  393 (486)
                      .++.++.+.|+++-.+. |+|||+++.+.+........+...+.+++++  +.+++--+  ..|.|.+||+.+.+.+..+
T Consensus        91 L~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I  169 (391)
T KOG2110|consen   91 LAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTI  169 (391)
T ss_pred             EEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEE
Confidence            99999999888887765 9999999988776666665677778888883  44777533  4689999999999999999


Q ss_pred             cCCcccEEEEEeC--CCEEEEEeCCCc-EEEEECCCCeeeEEecCcc--cCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         394 NGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIECGACLRVLEGHE--ELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       394 ~~~~~~v~~~~~~--~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~h~--~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .+|.+.+.|++++  |.+||++++.|+ |||+.+.+|+.+.+|+.-.  ..|.+++|  |+.+|++.|..++|++|.++.
T Consensus       170 ~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  170 NAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             EecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            9999999999995  999999999998 7899999999999997543  35779999  889999999999999999987


Q ss_pred             CCC
Q psy9182         467 ALD  469 (486)
Q Consensus       467 ~~~  469 (486)
                      ...
T Consensus       250 ~~~  252 (391)
T KOG2110|consen  250 VSN  252 (391)
T ss_pred             ccc
Confidence            653

>KOG1034|consensus

Probab=99.77  E-value=2.2e-17  Score=140.16  Aligned_cols=225  Identities=23%  Similarity=0.384  Sum_probs=174.4

Q ss_pred             CEEEEEecCCeEEEEECCCce---eeEEEc--CCcccEEEEEe-----c-CCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQ---CIKVLT--GHTGSVLCLQY-----D-ERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~---~~~~~~--~~~~~v~~~~~-----~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +.+++.+ .+.+.+|+....-   .++.+.  .|......++|     + ..++++|+.-|.|+|.|+.++++...+.+|
T Consensus        56 ~vfatvG-~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~gh  134 (385)
T KOG1034|consen   56 QVFATVG-GNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGH  134 (385)
T ss_pred             ceEEEeC-CcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceecc
Confidence            3445444 4578888765432   233332  25555666666     2 458888999999999999999999999999


Q ss_pred             CccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182         314 CEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       314 ~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      ...|..+.+.|   +++++++.|..|++|++++...+..+.-..+|...|.++.|  ++.++++++.|..|++|++...+
T Consensus       135 G~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~  214 (385)
T KOG1034|consen  135 GGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKE  214 (385)
T ss_pred             CccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhH
Confidence            99999999985   48999999999999999999988888888999999999999  78899999999999999987321


Q ss_pred             E------E-------------------E---EEcCCcccEEEEEeCCCEEEEEeCCCcEEEEEC-CCCe-----------
Q psy9182         389 F------V-------------------R---TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI-ECGA-----------  428 (486)
Q Consensus       389 ~------~-------------------~---~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~-~~~~-----------  428 (486)
                      .      .                   .   +-..|...|-|+.|-|+++++-+-++.|..|.. +-++           
T Consensus       215 f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~  294 (385)
T KOG1034|consen  215 FKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESA  294 (385)
T ss_pred             HhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccc
Confidence            1      0                   0   123466677788888999999999999999987 2222           


Q ss_pred             --eeEEecCcccCeEEEEe----cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         429 --CLRVLEGHEELVRCIRF----DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       429 --~~~~~~~h~~~v~~~~~----~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                        .+..+.-....|+-|.|    -.+.||.|...|.|.+|||+....+
T Consensus       295 ~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~  342 (385)
T KOG1034|consen  295 TTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPP  342 (385)
T ss_pred             eeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCc
Confidence              23344444556777777    4567999999999999999987654

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.77  E-value=8.2e-15  Score=142.06  Aligned_cols=308  Identities=32%  Similarity=0.606  Sum_probs=220.8

Q ss_pred             ccCcc-eEEEeec-Cceeeeccccc-ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC-CCcceee
Q psy9182         113 NFDEK-YIVSASG-DRTIKVWNTSS-CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH-DDTILIW  188 (486)
Q Consensus       113 s~~~~-~l~tg~~-dg~v~iWd~~~-~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~-dg~i~vW  188 (486)
                      ++++. +++..+. |+.+++||... ......+..|...|..++|.               +++..+++++. |+.+++|
T Consensus       119 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~~~~~~~~~~~~~~~~~  183 (466)
T COG2319         119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFS---------------PDGKLLASGSSLDGTIKLW  183 (466)
T ss_pred             CCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEEC---------------CCCCEEEecCCCCCceEEE
Confidence            56666 5555444 99999999998 78889999999999999997               45556777775 9999999


Q ss_pred             ecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCC-EEEEEecCCeEEEEECCCceee
Q psy9182         189 DFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCI  267 (486)
Q Consensus       189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~  267 (486)
                      +.......                            ..+.. +........+.+++. .+++++.|+.|++||...+...
T Consensus       184 ~~~~~~~~----------------------------~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~  234 (466)
T COG2319         184 DLRTGKPL----------------------------STLAG-HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL  234 (466)
T ss_pred             EcCCCceE----------------------------Eeecc-CCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEE
Confidence            97541111                            11111 122333344445666 4555599999999998888888


Q ss_pred             E-EEcCCccc-EEEEEecCCEEEEEeCCCcEEEEECCCCcE-EEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECC
Q psy9182         268 K-VLTGHTGS-VLCLQYDERVIISGSSDSTVRVWDVNTGEM-VNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       268 ~-~~~~~~~~-v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~  342 (486)
                      . .+.+|... +..+..++..+++++.|+.+++||...... ...+..|...+.++.+.+  ..+++++.|+.+.+||..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~  314 (466)
T COG2319         235 RSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLE  314 (466)
T ss_pred             eeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcC
Confidence            7 68888777 444444778888999999999999987665 444456788999999987  477778888889999988


Q ss_pred             CCCceeeEEeeecCcccEEEEEeC--CCEEEEE-eCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC-CEEE-EEeCCC
Q psy9182         343 SPNEITLRRVLVGHRAAVNVVDFD--EKYIVSA-SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-RLVV-SGSSDN  417 (486)
Q Consensus       343 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~-~~~~dg  417 (486)
                      ......... ...|...+..+.+.  +..++.+ ..|+.+.+|+............... +..+.+.. ..+. .+..++
T Consensus       315 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  392 (466)
T COG2319         315 TGKLLSSLT-LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSN-VLSVSFSPDGRVVSSGSTDG  392 (466)
T ss_pred             CCceEEEee-ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCce-EEEEEECCCCCEEEEecCCC
Confidence            776553333 23566667777772  1455555 6788999999988773333333322 45554433 2333 378899


Q ss_pred             cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         418 TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       418 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .+.+|+............+...+....+  ++..+++++.++.+++|++..
T Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         393 TVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             ceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence            9999999988887777665466777776  777888899999999999986

>KOG1538|consensus

Probab=99.77  E-value=3.2e-17  Score=151.51  Aligned_cols=262  Identities=16%  Similarity=0.331  Sum_probs=195.5

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .|..++|-|||..|+.+..+ .+.++|...|.+++++++|+..|.|++|+               .||+.+++|+.|..|
T Consensus        14 ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llqtLKgHKDtVycVAys---------------~dGkrFASG~aDK~V   77 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQPLKGHKDTVYCVAYA---------------KDGKRFASGSADKSV   77 (1081)
T ss_pred             chheeEECCCCceEEEecCC-EEEEEeCCCcccccccccccceEEEEEEc---------------cCCceeccCCCceeE
Confidence            46677899999988887554 89999999999999999999999999997               689999999999999


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC--CCEEEEEecCCeEEEEECCC
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~  263 (486)
                      .+|+-.-..                                 .....|...+.|++++  ...|++++-+ ..-+|....
T Consensus        78 I~W~~klEG---------------------------------~LkYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~q  123 (1081)
T KOG1538|consen   78 IIWTSKLEG---------------------------------ILKYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQ  123 (1081)
T ss_pred             EEecccccc---------------------------------eeeeccCCeeeEeecCchHHHhhhcchh-hccccChhh
Confidence            999831100                                 0123567777887776  4667776654 466787554


Q ss_pred             ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec---ccCccEEEEEEcC-------CeEEEEe
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI---HHCEAVLHLRFSN-------GMMVTCS  331 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~i~~~~~~~-------~~l~~~~  331 (486)
                      ....+ .+ ....+.+.+|  ||.+++.|-.+|+|.+-+- +++....+.   +..++|.+++|++       +.+++..
T Consensus       124 K~V~K-~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~D  200 (1081)
T KOG1538|consen  124 KSVSK-HK-SSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVAD  200 (1081)
T ss_pred             hhHHh-hh-hheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEe
Confidence            33221 11 2345677888  8999999999999999875 455444443   3678899999975       3788899


Q ss_pred             CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CC
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RD  407 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~  407 (486)
                      ...++.+|.+.....- ..+   .-.-...|+++  +|.+++.|+.|+.+.+|. +.|-.+.++......|..+..  ++
T Consensus       201 W~qTLSFy~LsG~~Ig-k~r---~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNs  275 (1081)
T KOG1538|consen  201 WGQTLSFYQLSGKQIG-KDR---ALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNS  275 (1081)
T ss_pred             ccceeEEEEecceeec-ccc---cCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCC
Confidence            9999999988643211 111   11222334554  999999999999999997 557777777767777776665  68


Q ss_pred             CEEEEEeCCCcEEEEECC
Q psy9182         408 RLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~  425 (486)
                      ++++.|+.||+|..|++.
T Consensus       276 Q~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  276 QYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             ceEEEEEccCeeehhhhH
Confidence            999999999999999874

>KOG2919|consensus

Probab=99.76  E-value=2.4e-16  Score=133.59  Aligned_cols=232  Identities=23%  Similarity=0.352  Sum_probs=172.5

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCce------------eeEEEc-CCcccEEEEEe---------cCCEEEEEeCCCc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQ------------CIKVLT-GHTGSVLCLQY---------DERVIISGSSDST  295 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~-~~~~~v~~~~~---------~~~~l~~~~~dg~  295 (486)
                      ..++|||..|++-+.|..+.+|++...-            ....++ .....|....|         +.+++++.+.+.-
T Consensus        55 ckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~P  134 (406)
T KOG2919|consen   55 CKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQP  134 (406)
T ss_pred             ceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccCc
Confidence            4588999999999999999999864311            011111 12234544444         4578999999999


Q ss_pred             EEEEECCCCcEEEEecc--cC---ccEEEEEEcCC-eEEEEeCCCcEEEEECC-CCCceeeEEe----eecCcccEEEEE
Q psy9182         296 VRVWDVNTGEMVNTLIH--HC---EAVLHLRFSNG-MMVTCSKDRSIAVWDMV-SPNEITLRRV----LVGHRAAVNVVD  364 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~--~~---~~i~~~~~~~~-~l~~~~~dg~i~i~d~~-~~~~~~~~~~----~~~~~~~v~~~~  364 (486)
                      |++||.-+|+....+..  |.   ....++.|+++ .-+.++....|++||+. .+........    ..+..+-+.+++
T Consensus       135 Ih~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a  214 (406)
T KOG2919|consen  135 IHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFA  214 (406)
T ss_pred             eeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceeeeee
Confidence            99999999998777644  22   23467889865 44555667899999994 3332211111    223456677777


Q ss_pred             e---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeC-CCcEEEEECCC-CeeeEEecCcc
Q psy9182         365 F---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSS-DNTIRLWDIEC-GACLRVLEGHE  437 (486)
Q Consensus       365 ~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~v~iwd~~~-~~~~~~~~~h~  437 (486)
                      +   +...++.|+....+-||.-..+.++..+-+|.+.|+.+.|  +|+.|++|+. |-.|..||++. +.++..+..|.
T Consensus       215 ~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv  294 (406)
T KOG2919|consen  215 FSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHV  294 (406)
T ss_pred             ccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhc
Confidence            7   6678999999999999998999999999999999999999  4888888884 78899999975 56777888886


Q ss_pred             c-CeEEEEe----cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         438 E-LVRCIRF----DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       438 ~-~v~~~~~----~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      . .=..|-|    +++.|++|+.||.|++||+..-.+
T Consensus       295 ~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn  331 (406)
T KOG2919|consen  295 GDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGN  331 (406)
T ss_pred             cCccceEEEecCCCCceeeccCCCccEEEEecCCCCC
Confidence            6 3334555    789999999999999999998443

>KOG1517|consensus

Probab=99.75  E-value=3.2e-16  Score=152.09  Aligned_cols=223  Identities=18%  Similarity=0.347  Sum_probs=157.8

Q ss_pred             CCCEEEEEecCCeEEEEECC-----CceeeEEEcC---C----cccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRV-----SLQCIKVLTG---H----TGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN  308 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~---~----~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~  308 (486)
                      |..++++|+.||.|+||+--     +.+.+..+.+   +    .+.=.-+.|  ...+|++++.-..|+|||........
T Consensus      1122 D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~ 1201 (1387)
T KOG1517|consen 1122 DDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVA 1201 (1387)
T ss_pred             chhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEe
Confidence            56789999999999999632     2233333321   1    111123455  33455555557899999999888777


Q ss_pred             Eeccc-CccEEEEEEc---CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCccc--EEEEEe--CCC-EEEEEeCCCcE
Q psy9182         309 TLIHH-CEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA--VNVVDF--DEK-YIVSASGDRTI  379 (486)
Q Consensus       309 ~~~~~-~~~i~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--v~~~~~--~~~-~l~~~~~d~~i  379 (486)
                      .+... ...++++..+   ++.+++|..||.|++||.+....-........|...  |..+.+  .|- .|++|+.+|.|
T Consensus      1202 diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I 1281 (1387)
T KOG1517|consen 1202 DIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDI 1281 (1387)
T ss_pred             ecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeE
Confidence            76443 3456666653   579999999999999999887654455566677766  888887  333 59999999999


Q ss_pred             EEEECCCceEE--EEEcCCc--c-cEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc-------ccCeEEEEe
Q psy9182         380 KVWNTSSCEFV--RTLNGHK--R-GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-------EELVRCIRF  445 (486)
Q Consensus       380 ~iwd~~~~~~~--~~~~~~~--~-~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~  445 (486)
                      ++||++.....  .++..|.  + ..+++..+  ...+|+|+. +.|+||++. |+.+..++.+       .+.+.+++|
T Consensus      1282 ~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~F 1359 (1387)
T KOG1517|consen 1282 QLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAF 1359 (1387)
T ss_pred             EEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeee
Confidence            99999974222  2233333  3 47888875  688999988 999999987 6666665543       346789999


Q ss_pred             cCCE--EEEEeCCCcEEEEeCCCC
Q psy9182         446 DAKR--IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       446 ~~~~--l~s~~~dg~v~iwdl~~~  467 (486)
                      ++.+  ||+|+.|.+|.||.-...
T Consensus      1360 HP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1360 HPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred             cchhHhhhhccCCceEEEeecCCc
Confidence            6654  889999999999987643

>KOG0642|consensus

Probab=99.75  E-value=2.1e-17  Score=149.95  Aligned_cols=229  Identities=19%  Similarity=0.364  Sum_probs=169.0

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECC--------CceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC--
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRV--------SLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG--  304 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~--------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--  304 (486)
                      ...+.+....|++++.||.|.+|++.        .-+++.+|.+|.++|.|+..  ++..+++|+.||+|+.|++...  
T Consensus       299 ~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~d  378 (577)
T KOG0642|consen  299 ALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQD  378 (577)
T ss_pred             hhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCC
Confidence            34555667889999999999999982        23567899999999999988  8899999999999999966421  


Q ss_pred             --------cEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC---CEEE
Q psy9182         305 --------EMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE---KYIV  371 (486)
Q Consensus       305 --------~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~  371 (486)
                              .....+.+|.+.+..++++.  +.|++++.||+++.|+...... ..+.. ......-+++++..   ...+
T Consensus       379 p~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~-~~e~g~Plsvd~~ss~~a~~~  456 (577)
T KOG0642|consen  379 PDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGE-PKEHGYPLSVDRTSSRPAHSL  456 (577)
T ss_pred             cccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCC-ccccCCcceEeeccchhHhhh
Confidence                    23456789999999999974  5899999999999999876554 11111 12223344566622   2233


Q ss_pred             EEeCCCcEEEEECCCceEEEEEcCCc-------ccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEE
Q psy9182         372 SASGDRTIKVWNTSSCEFVRTLNGHK-------RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC  442 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  442 (486)
                      +...-+.-.+++......+..+....       ..+..+.+  ...+.+++..|+.|+++|..+++.+.....|...+++
T Consensus       457 ~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svts  536 (577)
T KOG0642|consen  457 ASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTS  536 (577)
T ss_pred             hhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecc
Confidence            33333334444555444444444221       12233333  3678899999999999999999999999999999999


Q ss_pred             EEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         443 IRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       443 ~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +++  +|-+|++++.||.+++|.+...
T Consensus       537 lai~~ng~~l~s~s~d~sv~l~kld~k  563 (577)
T KOG0642|consen  537 LAIDPNGPYLMSGSHDGSVRLWKLDVK  563 (577)
T ss_pred             eeecCCCceEEeecCCceeehhhccch
Confidence            999  7788999999999999999743

>KOG0644|consensus

Probab=99.74  E-value=5.7e-18  Score=160.11  Aligned_cols=268  Identities=22%  Similarity=0.341  Sum_probs=204.6

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...|.|..|...|.++++|+.|..|+||..+++.++.++.||.+.|+.++.+.                         
T Consensus       188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~-------------------------  242 (1113)
T KOG0644|consen  188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSS-------------------------  242 (1113)
T ss_pred             hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccch-------------------------
Confidence            4667899999999999999999999999999999999999999999998887641                         


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                   +..++++++.|..|++|.+
T Consensus       243 -------------------------------------------------------------~n~~iaaaS~D~vIrvWrl  261 (1113)
T KOG0644|consen  243 -------------------------------------------------------------NNTMIAAASNDKVIRVWRL  261 (1113)
T ss_pred             -------------------------------------------------------------hhhhhhhcccCceEEEEec
Confidence                                                                         2334677888889999999


Q ss_pred             CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEe----c-ccCccEEEEEEcC--CeEEEEeCCC
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL----I-HHCEAVLHLRFSN--GMMVTCSKDR  334 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~-~~~~~i~~~~~~~--~~l~~~~~dg  334 (486)
                      ..+.++..+.+|.+.|++++|.+..  +.+.||++++||.+ .......    . .....+.++.+..  ..+++++.|+
T Consensus       262 ~~~~pvsvLrghtgavtaiafsP~~--sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~  338 (1113)
T KOG0644|consen  262 PDGAPVSVLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDG  338 (1113)
T ss_pred             CCCchHHHHhccccceeeeccCccc--cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCCc
Confidence            9999999999999999999997644  77889999999987 2222111    1 1123445555543  4788999999


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC---CC
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DR  408 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~  408 (486)
                      .-..|.+....         .+...+.-+..   ...+.+++-.+-.+.+|++.+|.+.+.+.+|...+..+.++   ..
T Consensus       339 ea~n~e~~~l~---------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~r  409 (1113)
T KOG0644|consen  339 EARNHEFEQLA---------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPR  409 (1113)
T ss_pred             ccccchhhHhh---------hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcH
Confidence            88888764321         11111111111   12466677778889999999999999999999999888874   67


Q ss_pred             EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ...+++.||...|||+-.|.+++........+..-+|  ||..++....-|.+.|.....+
T Consensus       410 i~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs  470 (1113)
T KOG0644|consen  410 IAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQS  470 (1113)
T ss_pred             hhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCC
Confidence            7789999999999999988887765433445556667  8888888888888888776543

>KOG1240|consensus

Probab=99.74  E-value=5.3e-16  Score=152.86  Aligned_cols=293  Identities=18%  Similarity=0.267  Sum_probs=196.2

Q ss_pred             cccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCC
Q psy9182         131 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSG  210 (486)
Q Consensus       131 Wd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~  210 (486)
                      |+.. |.++..+..|...|..++.+.              +++.+++|||.||+|++||.........            
T Consensus      1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~--------------~~~s~FvsgS~DGtVKvW~~~k~~~~~~------------ 1086 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSS--------------EHTSLFVSGSDDGTVKVWNLRKLEGEGG------------ 1086 (1431)
T ss_pred             CCcc-ceEeehhhhccccccceeecC--------------CCCceEEEecCCceEEEeeehhhhcCcc------------
Confidence            7775 889999999999998877753              3557899999999999999754321110            


Q ss_pred             cccccccccCceeEEEEecc-CCCccceEEEEeCCCEEEEEecCCeEEEEECCCce-------eeEEEcCC-cccEEEE-
Q psy9182         211 PSIENNWRMGKFLLQRINCR-SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-------CIKVLTGH-TGSVLCL-  280 (486)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~-~~~v~~~-  280 (486)
                                 ..-.+.... .+.....+.+.+.++.+|+++.||.|.+.++...+       +.+....+ .+.+..+ 
T Consensus      1087 -----------s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~ 1155 (1431)
T KOG1240|consen 1087 -----------SARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMH 1155 (1431)
T ss_pred             -----------eeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEee
Confidence                       000111111 23444555666789999999999999999876521       11222222 2334443 


Q ss_pred             Ee---cCC-EEEEEeCCCcEEEEECCCCcEEEEe--cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         281 QY---DER-VIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       281 ~~---~~~-~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                      ++   ... .++.+...+.|..||++.......+  ....+.|++++.++  +.++.|+..|.+.+||++-+..+...  
T Consensus      1156 a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw-- 1233 (1431)
T KOG1240|consen 1156 AFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSW-- 1233 (1431)
T ss_pred             cccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecc--
Confidence            33   344 7888888999999999877665544  33467789999886  49999999999999999987655432  


Q ss_pred             eecCcccEEEEEe---CC--CEEEEE-e-CCCcEEEEECCCceEEEEEcCC-c----------------c---cE-EEEE
Q psy9182         353 LVGHRAAVNVVDF---DE--KYIVSA-S-GDRTIKVWNTSSCEFVRTLNGH-K----------------R---GI-ACLQ  404 (486)
Q Consensus       353 ~~~~~~~v~~~~~---~~--~~l~~~-~-~d~~i~iwd~~~~~~~~~~~~~-~----------------~---~v-~~~~  404 (486)
                      ..++..++..+..   .+  ...+++ + ..+.|.+|++.+|.....+... .                .   .+ .++.
T Consensus      1234 ~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~ 1313 (1431)
T KOG1240|consen 1234 EHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVC 1313 (1431)
T ss_pred             cCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecc
Confidence            2234455554444   22  444444 3 5778999999998766655432 0                0   11 1222


Q ss_pred             eCCCEEEEEeCCCcEEEEECCCCeee-----------------------------E-------------------Ee---
Q psy9182         405 YRDRLVVSGSSDNTIRLWDIECGACL-----------------------------R-------------------VL---  433 (486)
Q Consensus       405 ~~~~~l~~~~~dg~v~iwd~~~~~~~-----------------------------~-------------------~~---  433 (486)
                      -.+..+.+|+.|..|+.||....+..                             .                   ..   
T Consensus      1314 ~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~ 1393 (1431)
T KOG1240|consen 1314 EKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPG 1393 (1431)
T ss_pred             cCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccC
Confidence            23678999999999999998532211                             0                   00   


Q ss_pred             -----cCcccCeEEEEe---cCCEEEEEeCCCcEEEEe
Q psy9182         434 -----EGHEELVRCIRF---DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       434 -----~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwd  463 (486)
                           ..|..+|++|++   +..+|++++.||.|++|.
T Consensus      1394 ~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1394 PSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             CCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence                 146778999988   444799999999999994

>KOG1587|consensus

Probab=99.74  E-value=7.2e-16  Score=146.97  Aligned_cols=233  Identities=14%  Similarity=0.221  Sum_probs=169.3

Q ss_pred             ceEEEEe-CCCEEEEEecCCeEEEEECCCcee--eEE----EcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCC
Q psy9182         236 GVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQC--IKV----LTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTG  304 (486)
Q Consensus       236 ~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~--~~~----~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~  304 (486)
                      .++++++ ++.+++.|..+|.|.+||+..+..  ...    ...|..+++.+.|    .+.-+++++.||.|..|+++.-
T Consensus       246 ~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l  325 (555)
T KOG1587|consen  246 TCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDML  325 (555)
T ss_pred             eEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeecccc
Confidence            3344444 678899999999999999887655  222    2358888999988    2356999999999999988643


Q ss_pred             cEE-E-----Eec------ccCccEEEEEEc---CCeEEEEeCCCcEEEEECCCCCc-e----eeEEeeecCcccEEEEE
Q psy9182         305 EMV-N-----TLI------HHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNE-I----TLRRVLVGHRAAVNVVD  364 (486)
Q Consensus       305 ~~~-~-----~~~------~~~~~i~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~-~----~~~~~~~~~~~~v~~~~  364 (486)
                      ... .     ...      .....++++.|.   ++.+++|+.+|.|..-+-..... .    ........|.+.|.++.
T Consensus       326 ~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~  405 (555)
T KOG1587|consen  326 SLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVS  405 (555)
T ss_pred             ccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeee
Confidence            221 1     111      223457788886   56999999999998733322111 1    11234567888999998


Q ss_pred             eC---CCEEEEEeCCCcEEEEECC-CceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCC--CeeeEEecC
Q psy9182         365 FD---EKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC--GACLRVLEG  435 (486)
Q Consensus       365 ~~---~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~--~~~~~~~~~  435 (486)
                      ++   ...+.+++ |-+++||... ...++..+..+...+++++|+   ...++++..||.|.+||+..  .+++.....
T Consensus       406 ~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~  484 (555)
T KOG1587|consen  406 RNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKV  484 (555)
T ss_pred             cCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccc
Confidence            83   44555555 8999999988 677888888888889999997   56899999999999999964  345555555


Q ss_pred             cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         436 HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       436 h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      +....+.+.|  .|..|+.|...|.+++|++.....
T Consensus       485 ~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~l~  520 (555)
T KOG1587|consen  485 CSPALTRVRWSPNGKLLAVGDANGTTHILKLSESLA  520 (555)
T ss_pred             cccccceeecCCCCcEEEEecCCCcEEEEEcCchhh
Confidence            5555566667  588999999999999999976544

>KOG1009|consensus

Probab=99.73  E-value=2.2e-15  Score=131.64  Aligned_cols=317  Identities=17%  Similarity=0.265  Sum_probs=194.2

Q ss_pred             ccccccCCccCcc-eEEEeecCceeeeccccccc---------ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         105 RDFISLLPNFDEK-YIVSASGDRTIKVWNTSSCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       105 ~~~~~~~~s~~~~-~l~tg~~dg~v~iWd~~~~~---------~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..+.++.+.++.. +++||+.|..|+||-+..++         .+..|..|...|+++.|+               +++.
T Consensus        14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~---------------p~ge   78 (434)
T KOG1009|consen   14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFS---------------PDGE   78 (434)
T ss_pred             CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEc---------------CCcC
Confidence            3455666666665 99999999999999876432         345678999999999998               6888


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      .|++|+.+|.+.+|....-...            .... +................+.....-+++++++..+++++.|+
T Consensus        79 lLASg~D~g~v~lWk~~~~~~~------------~~d~-e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn  145 (434)
T KOG1009|consen   79 LLASGGDGGEVFLWKQGDVRIF------------DADT-EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN  145 (434)
T ss_pred             eeeecCCCceEEEEEecCcCCc------------cccc-hhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc
Confidence            8999999999999986431000            0000 00001111222222222233344567888999999999999


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeC
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK  332 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~  332 (486)
                      .+++||+..|.....+..|...+..++||  ++++++-+.|...+.+.+...+.+.....  .....-.+.+      ..
T Consensus       146 s~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~--~~m~~~~~~~------~e  217 (434)
T KOG1009|consen  146 SVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGL--DIMPAKAFNE------RE  217 (434)
T ss_pred             eEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeee--eEeeecccCC------CC
Confidence            99999999999999999999999999995  68899999998788877765544433221  0001111111      11


Q ss_pred             CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC---------CCcEEEEECCC-ceEEEEEcCCcccEEE
Q psy9182         333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG---------DRTIKVWNTSS-CEFVRTLNGHKRGIAC  402 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---------d~~i~iwd~~~-~~~~~~~~~~~~~v~~  402 (486)
                      ....++|.-++.+....          -.++.++|.++++...         -+..++++-.. .++...+.+.......
T Consensus       218 ~~s~rLfhDeTlksFFr----------RlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~la  287 (434)
T KOG1009|consen  218 GKSTRLFHDETLKSFFR----------RLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALA  287 (434)
T ss_pred             cceeeeeecCchhhhhh----------hcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEE
Confidence            11223333222221100          0112224444433221         12233343221 2233334333333222


Q ss_pred             EEe-------------------CCCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         403 LQY-------------------RDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       403 ~~~-------------------~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      +.+                   .-+++++......|+|||.++-+++... .-|-..|+.++|  ||..|+..|.||...
T Consensus       288 vr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS  367 (434)
T KOG1009|consen  288 VRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCS  367 (434)
T ss_pred             EEeeeeEEEeccccccccccccccceEEEEeecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceE
Confidence            221                   1233444445678999999988887766 357789999999  888999999999877


Q ss_pred             EEeCCCC
Q psy9182         461 VWNLVAA  467 (486)
Q Consensus       461 iwdl~~~  467 (486)
                      +-.++..
T Consensus       368 ~vtfe~~  374 (434)
T KOG1009|consen  368 LVTFEPW  374 (434)
T ss_pred             EEEEcch
Confidence            7665543

>KOG0642|consensus

Probab=99.73  E-value=6.2e-17  Score=146.97  Aligned_cols=258  Identities=22%  Similarity=0.348  Sum_probs=178.2

Q ss_pred             ccccccccCCccCcceEEEeecCceeeeccccc--------ccceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS--------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~--------~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      |-..+..+++.+....|++++.||++++|+++.        -+.+.+|.+|.++|.|++..               .++.
T Consensus       293 ~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~---------------~n~~  357 (577)
T KOG0642|consen  293 HDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVP---------------SNGE  357 (577)
T ss_pred             chhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEec---------------CCce
Confidence            334566778888888999999999999999932        24688999999999999986               5677


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      ++++|+.||+|+.|++.. ..                                             .++.          
T Consensus       358 ~~ysgg~Dg~I~~w~~p~-n~---------------------------------------------dp~d----------  381 (577)
T KOG0642|consen  358 HCYSGGIDGTIRCWNLPP-NQ---------------------------------------------DPDD----------  381 (577)
T ss_pred             EEEeeccCceeeeeccCC-CC---------------------------------------------Cccc----------
Confidence            888999999999998621 00                                             0010          


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc--CccEEEEEEcCC---eE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNG---MM  327 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~---~l  327 (486)
                         .||  .......+.||.+.|+.+.+  ....|++++.||+++.|+.....+ .++...  ...-.++.+...   ..
T Consensus       382 ---s~d--p~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~  455 (577)
T KOG0642|consen  382 ---SYD--PSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHS  455 (577)
T ss_pred             ---ccC--cchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhh
Confidence               011  01123356789999988888  457799999999999999876665 333222  222344444332   33


Q ss_pred             EEEeCCCcEEEEECCCCCceeeEEeee--c--CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE
Q psy9182         328 VTCSKDRSIAVWDMVSPNEITLRRVLV--G--HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA  401 (486)
Q Consensus       328 ~~~~~dg~i~i~d~~~~~~~~~~~~~~--~--~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~  401 (486)
                      ++...-+.-.++++.............  +  ....+.-+..  ...+.+++..|+.|+++|..+++++.....|...++
T Consensus       456 ~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svt  535 (577)
T KOG0642|consen  456 LASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVT  535 (577)
T ss_pred             hhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceec
Confidence            333333333344444333222111110  0  0122333333  567889999999999999999999999999999999


Q ss_pred             EEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182         402 CLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE  437 (486)
Q Consensus       402 ~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~  437 (486)
                      +++++  |.+|++++.|+.|++|.+....++.....|.
T Consensus       536 slai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  536 SLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             ceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence            99884  8899999999999999998888877776664

>KOG4227|consensus

Probab=99.72  E-value=1.8e-15  Score=131.52  Aligned_cols=285  Identities=18%  Similarity=0.268  Sum_probs=197.6

Q ss_pred             eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccc
Q psy9182         139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWR  218 (486)
Q Consensus       139 ~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (486)
                      .+.+.+|.+.|.++.|+               .++..|++|+.|..+++|+++..-....++..+               
T Consensus        49 qKD~~~H~GCiNAlqFS---------------~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~---------------   98 (609)
T KOG4227|consen   49 QKDVREHTGCINALQFS---------------HNDRFLASGGDDMHGRVWNVDELMVRKTPKPIG---------------   98 (609)
T ss_pred             hhhhhhhccccceeeec---------------cCCeEEeecCCcceeeeechHHHHhhcCCCCce---------------
Confidence            34567899999999997               467789999999999999986543332221110               


Q ss_pred             cCceeEEEEeccCCCccceEEEEeC--CCEEEEEecCCeEEEEECCCceeeEEEcC--CcccEEEEEe--cCCEEEEEeC
Q psy9182         219 MGKFLLQRINCRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTG--HTGSVLCLQY--DERVIISGSS  292 (486)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~  292 (486)
                               .....|...|+|+.++  ...+++|..+++|...|+++.+.+..+..  ..+.|..+..  ..+.+++.+.
T Consensus        99 ---------~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~  169 (609)
T KOG4227|consen   99 ---------VMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTR  169 (609)
T ss_pred             ---------eccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEec
Confidence                     0112455778888885  56799999999999999999998887762  2347877766  5688999999


Q ss_pred             CCcEEEEECCCCc-EEEE--ecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEe-eecC---cccEEE
Q psy9182         293 DSTVRVWDVNTGE-MVNT--LIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRV-LVGH---RAAVNV  362 (486)
Q Consensus       293 dg~i~vwd~~~~~-~~~~--~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~---~~~v~~  362 (486)
                      +|.|.+||.+... .+..  ..........+.|+|   .++++.+..+.+.+||.+.......... ..+-   ...-..
T Consensus       170 ~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~  249 (609)
T KOG4227|consen  170 AKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMG  249 (609)
T ss_pred             CceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhh
Confidence            9999999998654 2221  222334456677764   4899999999999999987654321111 1111   111123


Q ss_pred             EEe--CCCEEEEEeCCCcEEEEECCCceE-EEEEcCCcc-------cEEEEEe-CCCEEEEEeCCCcEEEEECCC-----
Q psy9182         363 VDF--DEKYIVSASGDRTIKVWNTSSCEF-VRTLNGHKR-------GIACLQY-RDRLVVSGSSDNTIRLWDIEC-----  426 (486)
Q Consensus       363 ~~~--~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~-------~v~~~~~-~~~~l~~~~~dg~v~iwd~~~-----  426 (486)
                      ..|  +|+.+.+--....-.+||+.+.++ +..+. |..       .+.++.| +..-+++|+.+-.|++|.+..     
T Consensus       250 ~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D-~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~  328 (609)
T KOG4227|consen  250 SLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSD-HNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSY  328 (609)
T ss_pred             eeeCCCCCeehhhhccCCCEEeeeecccceeEecc-CCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCcccc
Confidence            344  677777666656667788877444 33333 322       2344555 355699999999999998842     


Q ss_pred             -----C-------------eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         427 -----G-------------ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       427 -----~-------------~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                           |             +.+..+++|.+.++.+.|  +..+|++.|-.+.+++|.
T Consensus       329 G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  329 GFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWS  385 (609)
T ss_pred             CccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheeccc
Confidence                 1             134567899999999999  667789999999999996

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.72  E-value=2.3e-14  Score=136.07  Aligned_cols=294  Identities=11%  Similarity=0.059  Sum_probs=197.5

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      .+.++++++.+|.|.-+|..+|+.+....-..........                 ++..++.++.++.+..+|..+++
T Consensus        64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v-----------------~~~~v~v~~~~g~l~ald~~tG~  126 (377)
T TIGR03300        64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA-----------------DGGLVFVGTEKGEVIALDAEDGK  126 (377)
T ss_pred             ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE-----------------cCCEEEEEcCCCEEEEEECCCCc
Confidence            4668888999999999999999988776544321111222                 33456666777888888876554


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE-EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY-CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                      .........                                .+. .....+..++.+..+|.|..||..+++.+..+...
T Consensus       127 ~~W~~~~~~--------------------------------~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~  174 (377)
T TIGR03300       127 ELWRAKLSS--------------------------------EVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRV  174 (377)
T ss_pred             EeeeeccCc--------------------------------eeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccC
Confidence            332211100                                000 01114567778888999999999999988777643


Q ss_pred             cccE-----EEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCc-----------cEEEEEEcCCeEEEEeCCCcEE
Q psy9182         274 TGSV-----LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE-----------AVLHLRFSNGMMVTCSKDRSIA  337 (486)
Q Consensus       274 ~~~v-----~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----------~i~~~~~~~~~l~~~~~dg~i~  337 (486)
                      ....     .+....+..++.+..+|.+..+|.++|+.+........           ......+.++.+++++.+|.++
T Consensus       175 ~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~  254 (377)
T TIGR03300       175 TPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVA  254 (377)
T ss_pred             CCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEE
Confidence            3221     11122345778888899999999999987765432110           0112234567888999999999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCC-cccEEEEEeCCCEEEEEeCC
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH-KRGIACLQYRDRLVVSGSSD  416 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d  416 (486)
                      .||..+++..-...    . .........+..++.++.+|.+..+|..+++.+...... ..........+..+++++.+
T Consensus       255 a~d~~tG~~~W~~~----~-~~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~  329 (377)
T TIGR03300       255 ALDLRSGRVLWKRD----A-SSYQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFE  329 (377)
T ss_pred             EEECCCCcEEEeec----c-CCccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCC
Confidence            99999887543221    1 112233346788888889999999999999887665322 22223333467889999999


Q ss_pred             CcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEE
Q psy9182         417 NTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       417 g~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iw  462 (486)
                      |.|+++|..+|+.+..++.+...+ .+..+.++.|+.++.||.|..|
T Consensus       330 G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       330 GYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTRDGDLYAF  376 (377)
T ss_pred             CEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeCCceEEEe
Confidence            999999999999999988766543 3444555678899999999875

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG0303|consensus

Probab=99.71  E-value=8.8e-16  Score=133.56  Aligned_cols=195  Identities=22%  Similarity=0.400  Sum_probs=150.6

Q ss_pred             EEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC-------cEEEEecccCccEEEEEEcC---CeEEEEeCCCc
Q psy9182         269 VLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG-------EMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRS  335 (486)
Q Consensus       269 ~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~  335 (486)
                      .+.+|.++|..+.|   +.+.+++|+.|.+|.||++-.+       +++..+.+|...|-.+.|+|   +.|++++.|..
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~  155 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT  155 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence            45689999999999   6789999999999999998654       45677889999999999986   58999999999


Q ss_pred             EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc--EEEEEe-CCCEE
Q psy9182         336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG--IACLQY-RDRLV  410 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~--v~~~~~-~~~~l  410 (486)
                      |.+||+.+++....   + .|...|.+++|  ||.++++++.|..|+|||.++++.+..-.+|.+.  ...+-. ++.++
T Consensus       156 v~iWnv~tgeali~---l-~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~  231 (472)
T KOG0303|consen  156 VSIWNVGTGEALIT---L-DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIF  231 (472)
T ss_pred             EEEEeccCCceeee---c-CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCcee
Confidence            99999999986532   2 39999999999  8999999999999999999999999998888763  344433 56655


Q ss_pred             EEEe---CCCcEEEEECCCCee---eEEecCcccCeEEEEe--cCCEEE-EEeCCCcEEEEeCCCCC
Q psy9182         411 VSGS---SDNTIRLWDIECGAC---LRVLEGHEELVRCIRF--DAKRIV-SGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       411 ~~~~---~dg~v~iwd~~~~~~---~~~~~~h~~~v~~~~~--~~~~l~-s~~~dg~v~iwdl~~~~  468 (486)
                      -+|.   ++..+-+||..+-+.   +..+.... .|.-=-+  |.+.+. +|-.|+.||.|.+....
T Consensus       232 tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSn-Gvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  232 TTGFSRMSERQIALWDPNNLEEPIALQELDTSN-GVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             eeccccccccceeccCcccccCcceeEEeccCC-ceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence            4444   478899999765332   33343332 3322222  445554 45569999999998653

>KOG1007|consensus

Probab=99.71  E-value=2.4e-15  Score=125.62  Aligned_cols=307  Identities=19%  Similarity=0.273  Sum_probs=193.0

Q ss_pred             CcceEEEee----cCceeeeccccccc--c-eeeecCcccceeEEEeec---ceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         115 DEKYIVSAS----GDRTIKVWNTSSCE--F-VRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       115 ~~~~l~tg~----~dg~v~iWd~~~~~--~-~~~l~~h~~~V~~~~~~~---~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      +.-.+++|.    .|+.|.+-++..+.  + -..|..|.+.|+.++-+|   +.++++.++..    + ..+.     ..
T Consensus        25 d~icFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s----~-s~vl-----~~   94 (370)
T KOG1007|consen   25 DHICFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTS----D-SGVL-----TG   94 (370)
T ss_pred             cceEEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccC----C-Ccce-----ee
Confidence            334455553    46778887765432  2 345778889999988764   33333322210    0 0000     23


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  264 (486)
                      +.+|.+.........               ..|    ..+..+..........+-+.|++..+++-. |..|.+|++..+
T Consensus        95 aaiw~ipe~~~~S~~---------------~tl----E~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~es  154 (370)
T KOG1007|consen   95 AAIWQIPEPLGQSNS---------------STL----ECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDES  154 (370)
T ss_pred             EEEEecccccCcccc---------------chh----hHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccC
Confidence            568987543221000               000    001111111112234455667888887765 889999999887


Q ss_pred             ee-eEEEc-----CCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCccEEEEEEcCC---eEEEE
Q psy9182         265 QC-IKVLT-----GHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNG---MMVTC  330 (486)
Q Consensus       265 ~~-~~~~~-----~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~---~l~~~  330 (486)
                      .. +..+.     .+....++-.|    +++.+++. .|+++..||+++......+ ..|...+..+.|+|+   .|++|
T Consensus       155 s~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~  233 (370)
T KOG1007|consen  155 SKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTC  233 (370)
T ss_pred             cchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEc
Confidence            65 33332     23334455555    56777765 5789999999988776666 567888999999987   89999


Q ss_pred             eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcC-CcccEEEEEeC
Q psy9182         331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYR  406 (486)
Q Consensus       331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~  406 (486)
                      +.||.|++||.+..+..  ...+.+|...|.++.|   ..+++++|+.|..|.+|....-.....+.. +...-      
T Consensus       234 gDdgyvriWD~R~tk~p--v~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese------  305 (370)
T KOG1007|consen  234 GDDGYVRIWDTRKTKFP--VQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESE------  305 (370)
T ss_pred             CCCccEEEEeccCCCcc--ccccCCCceEEEEEEecCccceEEEecCCCceeEEEecccccccccccccccccc------
Confidence            99999999999987643  3678899999999999   467899999999999998654322222211 10000      


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCC
Q psy9182         407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~  466 (486)
                           .-..|..=++=-+. ...+.++..|.+.|.+++|   |+-.+|+-+.||.+.|=.+..
T Consensus       306 -----~e~~dseer~kpL~-dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r  362 (370)
T KOG1007|consen  306 -----SEDEDSEERVKPLQ-DGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR  362 (370)
T ss_pred             -----CcchhhHHhccccc-ccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence                 00001111111122 3346778889999999999   999999999999998887753

>KOG1334|consensus

Probab=99.70  E-value=1.5e-16  Score=142.05  Aligned_cols=290  Identities=18%  Similarity=0.258  Sum_probs=205.6

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ..|+.-+..+.|+..|..|++|+.|..|.+||+..++....+ .+|...|.--.|-|.             .+...++++
T Consensus       139 ~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~-------------s~d~ti~~~  205 (559)
T KOG1334|consen  139 NKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPF-------------SGDRTIVTS  205 (559)
T ss_pred             cCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCC-------------CCCcCceec
Confidence            567788889999999999999999999999999998877666 489888876666442             355568888


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKV  258 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i  258 (486)
                      +.||.+++=.+.......                         ....+..+ ......+++.| ....|.+++.|+.+.-
T Consensus       206 s~dgqvr~s~i~~t~~~e-------------------------~t~rl~~h-~g~vhklav~p~sp~~f~S~geD~~v~~  259 (559)
T KOG1334|consen  206 SRDGQVRVSEILETGYVE-------------------------NTKRLAPH-EGPVHKLAVEPDSPKPFLSCGEDAVVFH  259 (559)
T ss_pred             cccCceeeeeecccccee-------------------------cceecccc-cCccceeeecCCCCCcccccccccceee
Confidence            888888776653211100                         01111111 22233344444 4567999999999999


Q ss_pred             EECCCceeeEEEc---CCcc---cEEEEEe---cCCEEEEEeCCCcEEEEECCCCcE------EEEe------cccCccE
Q psy9182         259 WDRVSLQCIKVLT---GHTG---SVLCLQY---DERVIISGSSDSTVRVWDVNTGEM------VNTL------IHHCEAV  317 (486)
Q Consensus       259 ~d~~~~~~~~~~~---~~~~---~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~------~~~~------~~~~~~i  317 (486)
                      +|+..+.....+.   .+..   ...+++.   +...+++|+.|..+++||.+.-..      +..+      ......|
T Consensus       260 ~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~I  339 (559)
T KOG1334|consen  260 IDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNI  339 (559)
T ss_pred             eeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccc
Confidence            9988766544332   2233   3355655   456899999999999999864322      1222      1234568


Q ss_pred             EEEEEc--CCeEEEEeCCCcEEEEECCCCCc----------eeeEEeeecCcc--cEEEEEe---CCCEEEEEeCCCcEE
Q psy9182         318 LHLRFS--NGMMVTCSKDRSIAVWDMVSPNE----------ITLRRVLVGHRA--AVNVVDF---DEKYIVSASGDRTIK  380 (486)
Q Consensus       318 ~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~----------~~~~~~~~~~~~--~v~~~~~---~~~~l~~~~~d~~i~  380 (486)
                      ++++|+  +..+++...|-.|+++.-..+.-          ........+|..  .|..+.|   ..+|+++|+.-|.|.
T Consensus       340 Tgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIF  419 (559)
T KOG1334|consen  340 TGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIF  419 (559)
T ss_pred             eeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEE
Confidence            999998  45788888899999995433221          112233566654  4667777   468999999999999


Q ss_pred             EEECCCceEEEEEcCCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCCee
Q psy9182         381 VWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       381 iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      ||+-.+++.++-+++....|+|+.+++  .+||+.+-|..|+||...+.+.
T Consensus       420 iW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er  470 (559)
T KOG1334|consen  420 IWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER  470 (559)
T ss_pred             EEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence            999999999999998888999999975  6799999999999998854443

>KOG1007|consensus

Probab=99.70  E-value=1.7e-15  Score=126.47  Aligned_cols=181  Identities=20%  Similarity=0.437  Sum_probs=134.1

Q ss_pred             CCCEEEEEecC-------CeEEEEECCCc---------eeeEEEc-CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC
Q psy9182         243 DDHKIVSGLRD-------NTIKVWDRVSL---------QCIKVLT-GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       243 ~~~~l~~~~~d-------g~i~i~d~~~~---------~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      +.+.|++...+       -.+.||.+...         +++..+. .+-+.|.|+.|  ++..+++-. |..|.+|++..
T Consensus        75 d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~e  153 (370)
T KOG1007|consen   75 DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDE  153 (370)
T ss_pred             CCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEccc
Confidence            55566665442       24678986542         3333443 34568899999  667777655 78899999987


Q ss_pred             CcE-EEEec-----ccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC---CEEE
Q psy9182         304 GEM-VNTLI-----HHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE---KYIV  371 (486)
Q Consensus       304 ~~~-~~~~~-----~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~  371 (486)
                      +.. +..+.     .+....++-+|+|   ...+....|+++..||+++.+...  .....|...|..+.|+.   .+|+
T Consensus       154 ss~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~--sI~dAHgq~vrdlDfNpnkq~~lv  231 (370)
T KOG1007|consen  154 SSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNN--SIEDAHGQRVRDLDFNPNKQHILV  231 (370)
T ss_pred             CcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEccchhhhc--chhhhhcceeeeccCCCCceEEEE
Confidence            765 33332     2344556667775   356666789999999999876543  44557888899999954   3799


Q ss_pred             EEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCC
Q psy9182         372 SASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~  426 (486)
                      +++.||.|++||.+. ..++..+.+|...|.++.++   .+++++|+.|..|.+|...+
T Consensus       232 t~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~s  290 (370)
T KOG1007|consen  232 TCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASS  290 (370)
T ss_pred             EcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccc
Confidence            999999999999986 45789999999999999996   78999999999999998754

>KOG0290|consensus

Probab=99.69  E-value=2.9e-15  Score=125.27  Aligned_cols=224  Identities=17%  Similarity=0.309  Sum_probs=165.3

Q ss_pred             CCEEEEEec----CCeEEEEEC--CCceeeEEE-cCCcccEEEEEe--c-----CCEEEEEeCCCcEEEEECCCCcEEE-
Q psy9182         244 DHKIVSGLR----DNTIKVWDR--VSLQCIKVL-TGHTGSVLCLQY--D-----ERVIISGSSDSTVRVWDVNTGEMVN-  308 (486)
Q Consensus       244 ~~~l~~~~~----dg~i~i~d~--~~~~~~~~~-~~~~~~v~~~~~--~-----~~~l~~~~~dg~i~vwd~~~~~~~~-  308 (486)
                      +.+|+.|+.    .+.|.|..+  .+++.+..- ..|.-+++.+.|  +     .++|++.+  ..+++|.+...+... 
T Consensus        59 ~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~  136 (364)
T KOG0290|consen   59 KFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVE  136 (364)
T ss_pred             ceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCcee
Confidence            345666653    345555543  344443222 247888888888  2     24555543  479999987422111 


Q ss_pred             ---E-----ecccCccEEEEEEc---CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEe
Q psy9182         309 ---T-----LIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSAS  374 (486)
Q Consensus       309 ---~-----~~~~~~~i~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~  374 (486)
                         .     -..+..+++++.|+   ++++.+.+-|-+..|||++++........+..|...|..++|   .-+.+++.+
T Consensus       137 ~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvg  216 (364)
T KOG0290|consen  137 LQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVG  216 (364)
T ss_pred             hhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEec
Confidence               1     13356788999986   679999999999999999998554556778899999999999   246899999


Q ss_pred             CCCcEEEEECCCceEEEEEc---CCcccEEEEEeC---CCEEEEEeCC-CcEEEEECCC-CeeeEEecCcccCeEEEEe-
Q psy9182         375 GDRTIKVWNTSSCEFVRTLN---GHKRGIACLQYR---DRLVVSGSSD-NTIRLWDIEC-GACLRVLEGHEELVRCIRF-  445 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~---~~~l~~~~~d-g~v~iwd~~~-~~~~~~~~~h~~~v~~~~~-  445 (486)
                      .||.+++||++..+.-..+-   ....+...++|+   .+++|+-..| ..|.|.|++. ..++..+++|.+.|+.++| 
T Consensus       217 aDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWa  296 (364)
T KOG0290|consen  217 ADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWA  296 (364)
T ss_pred             CCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEec
Confidence            99999999999865433332   224567788885   6788887665 5699999986 4678899999999999999 


Q ss_pred             --cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         446 --DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       446 --~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                        .+..|+++|.|..+.+||+..-.+
T Consensus       297 PhS~~hictaGDD~qaliWDl~q~~~  322 (364)
T KOG0290|consen  297 PHSSSHICTAGDDCQALIWDLQQMPR  322 (364)
T ss_pred             CCCCceeeecCCcceEEEEecccccc
Confidence              677899999999999999986543

>KOG0290|consensus

Probab=99.69  E-value=3e-15  Score=125.20  Aligned_cols=213  Identities=17%  Similarity=0.332  Sum_probs=161.2

Q ss_pred             CEEEEEecCCeEEEEECCCceee----EEE-----cCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCc---EEEE
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCI----KVL-----TGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGE---MVNT  309 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~----~~~-----~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~---~~~~  309 (486)
                      .+||+.  +..+++|.+...+..    ..+     ..+..+++++.|   +.+++.+++-|-+..|||++++.   ....
T Consensus       114 dlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ  191 (364)
T KOG0290|consen  114 DLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ  191 (364)
T ss_pred             chhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence            345544  347999987642211    111     235678899999   78999999999999999999873   3667


Q ss_pred             ecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCC-CcEEEE
Q psy9182         310 LIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGD-RTIKVW  382 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d-~~i~iw  382 (486)
                      +-.|...|..++|..   +.+++.+.||.|++||++..+-............+...++|   |.+++|+-..| ..|.+.
T Consensus       192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iL  271 (364)
T KOG0290|consen  192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVIL  271 (364)
T ss_pred             EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEE
Confidence            788999999999985   48999999999999999987755444443333567778888   67788876654 569999


Q ss_pred             ECCC-ceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCee------eEEecCcccCeEEEEe---cCCE
Q psy9182         383 NTSS-CEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC------LRVLEGHEELVRCIRF---DAKR  449 (486)
Q Consensus       383 d~~~-~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~------~~~~~~h~~~v~~~~~---~~~~  449 (486)
                      |++. ..++..+++|.+.|+.++|.   ...|++++.|..+.+||+.+.-.      +..+. ..+.|+.+.|   .+.+
T Consensus       272 DiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dw  350 (364)
T KOG0290|consen  272 DIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDW  350 (364)
T ss_pred             EecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCE
Confidence            9987 56788999999999999994   78899999999999999975322      22222 4568999999   5677


Q ss_pred             EEEEeCCCcEEE
Q psy9182         450 IVSGAYDGKIKV  461 (486)
Q Consensus       450 l~s~~~dg~v~i  461 (486)
                      ++.+. ++++.+
T Consensus       351 iai~~-~kklei  361 (364)
T KOG0290|consen  351 IAICF-GKKLEI  361 (364)
T ss_pred             EEEEe-cCeeeE
Confidence            87776 344444

>KOG0303|consensus

Probab=99.68  E-value=5e-15  Score=128.93  Aligned_cols=236  Identities=19%  Similarity=0.305  Sum_probs=159.0

Q ss_pred             CcceEEE---eecCceeeeccc-ccccc---eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCccee
Q psy9182         115 DEKYIVS---ASGDRTIKVWNT-SSCEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILI  187 (486)
Q Consensus       115 ~~~~l~t---g~~dg~v~iWd~-~~~~~---~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~v  187 (486)
                      +.++||.   ++..|-..+--+ ++|+.   .-.+.||+++|..++|++              .++..++|||.|.+|.+
T Consensus        43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~P--------------fnD~vIASgSeD~~v~v  108 (472)
T KOG0303|consen   43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCP--------------FNDCVIASGSEDTKVMV  108 (472)
T ss_pred             CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCc--------------cCCceeecCCCCceEEE
Confidence            3456655   233334433332 34543   345679999999999987              57788999999999999


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCcee
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQC  266 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~  266 (486)
                      |++..........                     .....+.. +.....++.++|. .+.|++++.|.+|.+||+.+++.
T Consensus       109 W~IPe~~l~~~lt---------------------epvv~L~g-H~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgea  166 (472)
T KOG0303|consen  109 WQIPENGLTRDLT---------------------EPVVELYG-HQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEA  166 (472)
T ss_pred             EECCCcccccCcc---------------------cceEEEee-cceeEEEEeecccchhhHhhccCCceEEEEeccCCce
Confidence            9985433221111                     00111111 1223344555653 56789999999999999999999


Q ss_pred             eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc--EEEEEEcCCeEEEEe----CCCcEEE
Q psy9182         267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA--VLHLRFSNGMMVTCS----KDRSIAV  338 (486)
Q Consensus       267 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--i~~~~~~~~~l~~~~----~dg~i~i  338 (486)
                      +-.+. |..-|.+++|  ||.++++.+.|..|+|||.++++.+..-..|.+.  ...+-..++.+++.+    .+..+-+
T Consensus       167 li~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aL  245 (472)
T KOG0303|consen  167 LITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIAL  245 (472)
T ss_pred             eeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceec
Confidence            98888 9999999999  8999999999999999999999999887666543  334444444455443    4678999


Q ss_pred             EECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCCcEEEEECCCce
Q psy9182         339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDRTIKVWNTSSCE  388 (486)
Q Consensus       339 ~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~~i~iwd~~~~~  388 (486)
                      ||..+-+.......+.. ...|.---+  +.+.++ +|-.|+.|+.|.+.+..
T Consensus       246 wdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  246 WDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             cCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence            99887665533333332 233322222  445554 45579999999987755

>KOG1188|consensus

Probab=99.68  E-value=1.7e-15  Score=129.58  Aligned_cols=184  Identities=21%  Similarity=0.372  Sum_probs=141.9

Q ss_pred             CEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc----CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccE
Q psy9182         285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS----NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV  360 (486)
Q Consensus       285 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v  360 (486)
                      ..++++...|.|++||..+++.+..++++...+..+.|.    ++.+.+++.||.|++||++.......+........+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            567888888999999998888888888888877777774    4588999999999999999876654333322223456


Q ss_pred             EEEEe--CCCEEEEEe----CCCcEEEEECCCceE-EEEE-cCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCe-
Q psy9182         361 NVVDF--DEKYIVSAS----GDRTIKVWNTSSCEF-VRTL-NGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGA-  428 (486)
Q Consensus       361 ~~~~~--~~~~l~~~~----~d~~i~iwd~~~~~~-~~~~-~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~-  428 (486)
                      .+++.  .++.+++|+    .+-.|.+||.+..+. +..+ ..|...|+++.|+   .++|++|+.||.|.+||++... 
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E  200 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE  200 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence            66666  566777775    366799999998765 5554 5899999999995   7899999999999999997542 


Q ss_pred             --eeEEecCcccCeEEEEe-cCC--EEEEEeCCCcEEEEeCCCCC
Q psy9182         429 --CLRVLEGHEELVRCIRF-DAK--RIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       429 --~~~~~~~h~~~v~~~~~-~~~--~l~s~~~dg~v~iwdl~~~~  468 (486)
                        .+...-.|...|..+.| ...  +|.+-+..++..+|++..+.
T Consensus       201 eDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~  245 (376)
T KOG1188|consen  201 EDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS  245 (376)
T ss_pred             hhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence              22223347778999999 333  58899999999999998765

>KOG0650|consensus

Probab=99.68  E-value=6.7e-15  Score=134.72  Aligned_cols=229  Identities=18%  Similarity=0.354  Sum_probs=170.6

Q ss_pred             CCCccceEEEE--eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec----CCEEEEEeCCCcEEEEECCCC
Q psy9182         231 SENSKGVYCLQ--YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD----ERVIISGSSDSTVRVWDVNTG  304 (486)
Q Consensus       231 ~~~~~~v~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~vwd~~~~  304 (486)
                      .+|...+.|++  +.|..|++|+.||+|+||.+.++.+++.+. -.+.|.|++|+    -..|+++.. +.+.+.+..-|
T Consensus       397 rGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~-~~~~ivnp~~G  474 (733)
T KOG0650|consen  397 RGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVG-ECVLIVNPIFG  474 (733)
T ss_pred             eccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEec-CceEEeCcccc
Confidence            35666666665  578999999999999999999999999887 45689999993    234444433 33555544322


Q ss_pred             cE-------------------------------------EEEecccCccEEEEEEc--CCeEEEEeC---CCcEEEEECC
Q psy9182         305 EM-------------------------------------VNTLIHHCEAVLHLRFS--NGMMVTCSK---DRSIAVWDMV  342 (486)
Q Consensus       305 ~~-------------------------------------~~~~~~~~~~i~~~~~~--~~~l~~~~~---dg~i~i~d~~  342 (486)
                      ..                                     +.....|...|..+.|+  +++|++...   ...|.|+++.
T Consensus       475 ~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLS  554 (733)
T KOG0650|consen  475 DRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLS  554 (733)
T ss_pred             chhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecc
Confidence            10                                     11222355677888887  457777654   4578899987


Q ss_pred             CCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCc
Q psy9182         343 SPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT  418 (486)
Q Consensus       343 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~  418 (486)
                      .....   ..+....+.+.++.|  ...+|++++. ..|++||+...++++.+......|..++.+  |.-|+.|+.|+.
T Consensus       555 K~~sQ---~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k  630 (733)
T KOG0650|consen  555 KRKSQ---SPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKK  630 (733)
T ss_pred             ccccc---CchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCe
Confidence            76543   223345667888888  3456777665 689999999988888888888888888875  789999999999


Q ss_pred             EEEEECCCC-eeeEEecCcccCeEEEEecCCE--EEEEeCCCcEEEEeCC
Q psy9182         419 IRLWDIECG-ACLRVLEGHEELVRCIRFDAKR--IVSGAYDGKIKVWNLV  465 (486)
Q Consensus       419 v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~--l~s~~~dg~v~iwdl~  465 (486)
                      +..||+.-+ ++.+.+..|...+++|+|++++  +++|+.||++.|+--.
T Consensus       631 ~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~  680 (733)
T KOG0650|consen  631 MCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGM  680 (733)
T ss_pred             eEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeee
Confidence            999999754 6778899999999999997776  8999999999998643

>KOG1334|consensus

Probab=99.67  E-value=5.8e-16  Score=138.29  Aligned_cols=288  Identities=20%  Similarity=0.364  Sum_probs=204.4

Q ss_pred             cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccc
Q psy9182         137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN  216 (486)
Q Consensus       137 ~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (486)
                      .+...|..|.+.|..+.|+               ..+..+++++.|..|.+||+...........               
T Consensus       133 ~l~~kL~~H~GcVntV~FN---------------~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~S---------------  182 (559)
T KOG1334|consen  133 RLQKKLNKHKGCVNTVHFN---------------QRGDVLASGSDDLQVVVWDWVSGSPKLSFES---------------  182 (559)
T ss_pred             hhhhcccCCCCccceeeec---------------ccCceeeccCccceEEeehhhccCccccccc---------------
Confidence            3456688999999999997               5777899999999999999966543322211               


Q ss_pred             cccCceeEEEEeccCCCccce---EEEEe-CCCEEEEEecCCeEEEEECCC-cee--eEEEcCCcccEEEEEe---cCCE
Q psy9182         217 WRMGKFLLQRINCRSENSKGV---YCLQY-DDHKIVSGLRDNTIKVWDRVS-LQC--IKVLTGHTGSVLCLQY---DERV  286 (486)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~v---~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~---~~~~  286 (486)
                                     +|...+   -.+.+ +...+++.+.||.+++=.+.. +.+  .+.+..|.++|..++.   ....
T Consensus       183 ---------------GH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~  247 (559)
T KOG1334|consen  183 ---------------GHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKP  247 (559)
T ss_pred             ---------------ccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCc
Confidence                           111111   11222 345688999999999876544 222  3455678899887777   5688


Q ss_pred             EEEEeCCCcEEEEECCCCcEEEEec---ccCc---cEEEEEEcC---CeEEEEeCCCcEEEEECCCCCce---------e
Q psy9182         287 IISGSSDSTVRVWDVNTGEMVNTLI---HHCE---AVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEI---------T  348 (486)
Q Consensus       287 l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~---~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~---------~  348 (486)
                      |.+++.|+.+.-+|++++.....+.   .+..   ....++..|   +.+++|+.|..+++||.+.-...         .
T Consensus       248 f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~  327 (559)
T KOG1334|consen  248 FLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFC  327 (559)
T ss_pred             ccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcC
Confidence            9999999999999998876544332   2222   345566654   48999999999999998763321         1


Q ss_pred             eEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC--c----------eEEEE-EcCCccc--EEEEEe---CCC
Q psy9182         349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS--C----------EFVRT-LNGHKRG--IACLQY---RDR  408 (486)
Q Consensus       349 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~--~----------~~~~~-~~~~~~~--v~~~~~---~~~  408 (486)
                      ...........|+++.+  ++.-+.++-.|-.|+++...-  |          ..+.. +++|...  |-.+.|   ...
T Consensus       328 p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsE  407 (559)
T KOG1334|consen  328 PHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSE  407 (559)
T ss_pred             CccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccc
Confidence            11112234567888888  555566666777899996432  2          22333 7788753  555555   368


Q ss_pred             EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCC--EEEEEeCCCcEEEEeCCCCCC
Q psy9182         409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ++++|+.-|.|.||+-.+++.++.+++-...|+||..++.  .||+.|-|.-|+||--.+...
T Consensus       408 yVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er  470 (559)
T KOG1334|consen  408 YVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER  470 (559)
T ss_pred             eEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence            9999999999999999999999999887779999999665  499999999999998755443

>KOG0644|consensus

Probab=99.66  E-value=6.4e-17  Score=153.12  Aligned_cols=234  Identities=23%  Similarity=0.453  Sum_probs=182.8

Q ss_pred             CCCccceEEEEeC--CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE
Q psy9182         231 SENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM  306 (486)
Q Consensus       231 ~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~  306 (486)
                      .+|...|+|..+|  |.++++|+.|..++||...++.++....||.+.|+.++.  +..++++++.|..|++|.+.++.+
T Consensus       187 lgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~p  266 (1113)
T KOG0644|consen  187 LGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAP  266 (1113)
T ss_pred             HhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCch
Confidence            3677788887774  889999999999999999999999999999999999888  567889999999999999999999


Q ss_pred             EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceee-EEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEE
Q psy9182         307 VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL-RRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN  383 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd  383 (486)
                      +..+.+|++.|++++|+|-.  +.+.||++++||.+-...... ..........+.++.+  ++..+++++.|+.-..|.
T Consensus       267 vsvLrghtgavtaiafsP~~--sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e  344 (1113)
T KOG0644|consen  267 VSVLRGHTGAVTAIAFSPRA--SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRDGEARNHE  344 (1113)
T ss_pred             HHHHhccccceeeeccCccc--cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCCcccccch
Confidence            99999999999999999865  778999999999882111111 1111112234445555  667889999999888877


Q ss_pred             CCCceEEEEEcCCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCC
Q psy9182         384 TSSCEFVRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDG  457 (486)
Q Consensus       384 ~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg  457 (486)
                      .....      .+...+.-+..   ...+.+++-.+..+++|++.+|..++.+.+|...+..+.+   +.....+++.||
T Consensus       345 ~~~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dg  418 (1113)
T KOG0644|consen  345 FEQLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDG  418 (1113)
T ss_pred             hhHhh------hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCC
Confidence            54321      11111111111   1356677778889999999999999999999999998888   677788999999


Q ss_pred             cEEEEeCCCCCCCCC
Q psy9182         458 KIKVWNLVAALDPRA  472 (486)
Q Consensus       458 ~v~iwdl~~~~~~~~  472 (486)
                      ...|||+-.+...+.
T Consensus       419 st~iwdi~eg~pik~  433 (1113)
T KOG0644|consen  419 STIIWDIWEGIPIKH  433 (1113)
T ss_pred             ceEeeecccCCccee
Confidence            999999988866543

>KOG2111|consensus

Probab=99.65  E-value=3.3e-13  Score=114.71  Aligned_cols=228  Identities=14%  Similarity=0.268  Sum_probs=163.1

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcc--cEEEEEecCCEEEE-EeCC------CcEEEEECCCCcEEE
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLCLQYDERVIIS-GSSD------STVRVWDVNTGEMVN  308 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~-~~~d------g~i~vwd~~~~~~~~  308 (486)
                      .++..|..-+++|..+| .+||+.+..+.....+.+.+  .+..+-+..++++. |+.+      ..|.|||-....++.
T Consensus        11 vs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~   89 (346)
T KOG2111|consen   11 VSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCII   89 (346)
T ss_pred             EEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEE
Confidence            45556677788777665 89999876443322222222  23333444455443 4333      469999977777777


Q ss_pred             EecccCccEEEEEEcCCeEEEEeCCCcEEEEECCC-CCceeeEEeeecCcccEEEEEe--CCCEEEE-EeCCCcEEEEEC
Q psy9182         309 TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF--DEKYIVS-ASGDRTIKVWNT  384 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~d~~i~iwd~  384 (486)
                      ++.. ..+|.++.+.++.+++.- ++.|++|...+ .+.+........ .....++..  +..+||. |..-|.|+|-|+
T Consensus        90 el~f-~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~~N-PkGlC~~~~~~~k~~LafPg~k~GqvQi~dL  166 (346)
T KOG2111|consen   90 ELSF-NSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETRSN-PKGLCSLCPTSNKSLLAFPGFKTGQVQIVDL  166 (346)
T ss_pred             EEEe-ccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecccC-CCceEeecCCCCceEEEcCCCccceEEEEEh
Confidence            7765 678999999999887765 56899999873 443333332222 233455555  3334443 446799999999


Q ss_pred             CCceE--EEEEcCCcccEEEEEeC--CCEEEEEeCCCc-EEEEECCCCeeeEEecCc--ccCeEEEEe--cCCEEEEEeC
Q psy9182         385 SSCEF--VRTLNGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIECGACLRVLEGH--EELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       385 ~~~~~--~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~h--~~~v~~~~~--~~~~l~s~~~  455 (486)
                      ...+.  ...+++|...|.|++.+  |.++|++|..|+ |||||..+|+.+.+++.-  ...|.+|+|  +..+|+++|+
T Consensus       167 ~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSd  246 (346)
T KOG2111|consen  167 ASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSD  246 (346)
T ss_pred             hhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcC
Confidence            87655  47889999999999985  999999999998 799999999999998643  357999999  8889999999


Q ss_pred             CCcEEEEeCCCCCC
Q psy9182         456 DGKIKVWNLVAALD  469 (486)
Q Consensus       456 dg~v~iwdl~~~~~  469 (486)
                      -|+|+||.+.....
T Consensus       247 KgTlHiF~l~~~~~  260 (346)
T KOG2111|consen  247 KGTLHIFSLRDTEN  260 (346)
T ss_pred             CCeEEEEEeecCCC
Confidence            99999999987553

>KOG2110|consensus

Probab=99.65  E-value=4e-13  Score=116.41  Aligned_cols=305  Identities=16%  Similarity=0.227  Sum_probs=195.0

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcce
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTIL  186 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~  186 (486)
                      +..+.++.+...|..|+.|| -++++................|..+-|+..+++               ++....-+.++
T Consensus         8 i~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLva---------------iV~~~qpr~Lk   71 (391)
T KOG2110|consen    8 INFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVA---------------IVSIKQPRKLK   71 (391)
T ss_pred             eeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccceeE---------------EEecCCCceEE
Confidence            34445788888888899886 466766554432222222334555556554444               33332224466


Q ss_pred             eeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCcee
Q psy9182         187 IWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC  266 (486)
Q Consensus       187 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  266 (486)
                      +.++....                                .-|...-+..++++..+.++|++.-.+. |+|||+++.+.
T Consensus        72 v~~~Kk~~--------------------------------~ICe~~fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~Mkl  118 (391)
T KOG2110|consen   72 VVHFKKKT--------------------------------TICEIFFPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKL  118 (391)
T ss_pred             EEEcccCc--------------------------------eEEEEecCCceEEEEEccceEEEEEccc-EEEEeccccee
Confidence            66653211                                1223345677888889999999887765 99999999999


Q ss_pred             eEEEcC---CcccEEEEEec--CCEEEEE--eCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCc-E
Q psy9182         267 IKVLTG---HTGSVLCLQYD--ERVIISG--SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRS-I  336 (486)
Q Consensus       267 ~~~~~~---~~~~v~~~~~~--~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~-i  336 (486)
                      +.++..   +...+.+++++  +.+++--  ...|.|.+||..+-+.+..+..|.+.+.+++|+++  ++++++..|+ |
T Consensus       119 LhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVI  198 (391)
T KOG2110|consen  119 LHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVI  198 (391)
T ss_pred             ehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEE
Confidence            887753   45567888883  4566653  23589999999999999999999999999999854  9999998886 6


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEe
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS  414 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  414 (486)
                      +++.+.+++.+..++.-.- ...|.+++|  ++.+|++.+..++|++|.++...    .+....+-..-.+.+.+.-...
T Consensus       199 RVf~v~~G~kl~eFRRG~~-~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~----~~~~~~p~~~~~~~~~~sk~~~  273 (391)
T KOG2110|consen  199 RVFSVPEGQKLYEFRRGTY-PVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS----NNPPESPTAGTSWFGKVSKAAT  273 (391)
T ss_pred             EEEEcCCccEeeeeeCCce-eeEEEEEEECCCCCeEEEecCCCeEEEEEecccc----cCCCCCCCCCCcccchhhhhhh
Confidence            8999998887654433222 456778888  88999999999999999987644    1111111111111111110000


Q ss_pred             C---CCcEEEEECCCCeeeEEecCccc---CeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         415 S---DNTIRLWDIECGACLRVLEGHEE---LVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       415 ~---dg~v~iwd~~~~~~~~~~~~h~~---~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .   .+.-.+||..  +.....+...+   .+..+.-  ...++..++.||.+..|.+...
T Consensus       274 sylps~V~~~~~~~--R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~~  332 (391)
T KOG2110|consen  274 SYLPSQVSSVLDQS--RKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPPK  332 (391)
T ss_pred             hhcchhhhhhhhhc--cceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCCC
Confidence            0   1122235543  22222222222   2333332  6788999999999999998864

>KOG1587|consensus

Probab=99.64  E-value=2.8e-14  Score=136.27  Aligned_cols=214  Identities=18%  Similarity=0.288  Sum_probs=160.1

Q ss_pred             CeEEEEECCCc-eeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcE--EEE----ecccCccEEEEEEc
Q psy9182         254 NTIKVWDRVSL-QCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEM--VNT----LIHHCEAVLHLRFS  323 (486)
Q Consensus       254 g~i~i~d~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~--~~~----~~~~~~~i~~~~~~  323 (486)
                      +.+.+|+++.. .+...+. ....|.|+.|   ++++++.|+.+|.|.+||++.+..  ...    ...|..++..+.|.
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~  300 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL  300 (555)
T ss_pred             ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence            47999999876 3334443 5677888888   789999999999999999987755  222    24578888998885


Q ss_pred             C----CeEEEEeCCCcEEEEECCCCCceeeEE---eee------cCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCc
Q psy9182         324 N----GMMVTCSKDRSIAVWDMVSPNEITLRR---VLV------GHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       324 ~----~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~------~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                      .    ..+++++.||.|..|+++.-.......   ...      .....++++.|   +...+++|+.+|.|.--+....
T Consensus       301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~  380 (555)
T KOG1587|consen  301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY  380 (555)
T ss_pred             ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence            3    369999999999999987643321111   111      23456777887   7789999999999987443322


Q ss_pred             --------eEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECC-CCeeeEEecCcccCeEEEEe---cCCEEEE
Q psy9182         388 --------EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRF---DAKRIVS  452 (486)
Q Consensus       388 --------~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~~~---~~~~l~s  452 (486)
                              +....+..|.+.|.++.++   ...+++++ |.+|+||... ...++..+..+...|++++|   .+..+++
T Consensus       381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~  459 (555)
T KOG1587|consen  381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFAT  459 (555)
T ss_pred             cccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEE
Confidence                    2233556788899999886   35555555 9999999988 77788888888889999999   5556999


Q ss_pred             EeCCCcEEEEeCCCCCC
Q psy9182         453 GAYDGKIKVWNLVAALD  469 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~~~  469 (486)
                      +..||.|.+|||.....
T Consensus       460 ~d~~G~l~iWDLl~~~~  476 (555)
T KOG1587|consen  460 VDGDGNLDIWDLLQDDE  476 (555)
T ss_pred             EcCCCceehhhhhcccc
Confidence            99999999999987654

>KOG1538|consensus

Probab=99.64  E-value=1.4e-13  Score=127.72  Aligned_cols=231  Identities=16%  Similarity=0.330  Sum_probs=175.6

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE---
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV---  307 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~---  307 (486)
                      +...-+|+.|||..|+.+. +..+.+||...|..++.+++|...|.|+++  ||+.+++|+.|..|.+|+..-.-.+   
T Consensus        13 hci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYS   91 (1081)
T KOG1538|consen   13 HCINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYS   91 (1081)
T ss_pred             cchheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeec
Confidence            4555678999999888775 447999999999999999999999999999  8999999999999999986422111   


Q ss_pred             -----EEec-----------------------------ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEE
Q psy9182         308 -----NTLI-----------------------------HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRR  351 (486)
Q Consensus       308 -----~~~~-----------------------------~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~  351 (486)
                           +-+.                             .....+.+.+|.++  +++.|-.+|+|.+-+-...+ .....
T Consensus        92 H~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEe-k~~I~  170 (1081)
T KOG1538|consen   92 HNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEE-KVKIE  170 (1081)
T ss_pred             cCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCc-ceEEe
Confidence                 1110                             01224556666543  78889999999988654333 33344


Q ss_pred             eeecCcccEEEEEeC-------CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182         352 VLVGHRAAVNVVDFD-------EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW  422 (486)
Q Consensus       352 ~~~~~~~~v~~~~~~-------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iw  422 (486)
                      ...+...+|.++.|+       ...+++.....++.+|.+. |+.+..-+.-.-...|+++  +|.+++.|+.|+.+.+|
T Consensus       171 Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~f  249 (1081)
T KOG1538|consen  171 RPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLF  249 (1081)
T ss_pred             CCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEE
Confidence            455678899999982       2478888888888888875 4555433333334455655  79999999999999999


Q ss_pred             ECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       423 d~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ..+ |-.+.++......|+.++.  ++++++.|+.||+|..|++...
T Consensus       250 TR~-GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fS  295 (1081)
T KOG1538|consen  250 TRD-GVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFS  295 (1081)
T ss_pred             eec-CeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHh
Confidence            854 8888888878889999988  8899999999999999998654

>KOG1963|consensus

Probab=99.62  E-value=2.2e-13  Score=130.60  Aligned_cols=319  Identities=18%  Similarity=0.250  Sum_probs=206.7

Q ss_pred             ccccccccCCccCcceEEEeecCceeeeccccc--c--cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS--C--EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~--~--~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      |...+.|.+++|.++++|+|..||.|.+|.-..  +  ...+.+.=|...|.+++|+               .+|.+|++
T Consensus       204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS---------------~~G~~LlS  268 (792)
T KOG1963|consen  204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFS---------------SDGAYLLS  268 (792)
T ss_pred             hcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEe---------------cCCceEee
Confidence            334478899999999999999999999997543  2  2345667788899999997               68899999


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                      |+..|.+.+|.+.++.....+                              +-+.+..-+.+++|+.+.+....|+.|.+
T Consensus       269 GG~E~VLv~Wq~~T~~kqfLP------------------------------RLgs~I~~i~vS~ds~~~sl~~~DNqI~l  318 (792)
T KOG1963|consen  269 GGREGVLVLWQLETGKKQFLP------------------------------RLGSPILHIVVSPDSDLYSLVLEDNQIHL  318 (792)
T ss_pred             cccceEEEEEeecCCCccccc------------------------------ccCCeeEEEEEcCCCCeEEEEecCceEEE
Confidence            999999999998776522211                              11234444567789999999999999999


Q ss_pred             EECCCceeeEEEcCCc-----------ccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEEecc-----cC------
Q psy9182         259 WDRVSLQCIKVLTGHT-----------GSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIH-----HC------  314 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~-----------~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----~~------  314 (486)
                      ....+.+....+.+-.           +-.+.+++|  .+.++-.+..|.|.+||+.+.+.+..+..     +.      
T Consensus       319 i~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~  398 (792)
T KOG1963|consen  319 IKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQ  398 (792)
T ss_pred             EeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeE
Confidence            9887766555544322           223444554  46677788899999999988776655521     11      


Q ss_pred             ccEEEEEEc--CCeEEEEe--------C--CCcEEEEECCCCCce--eeEEeeecCcccEEEEEe----CCCEEEEEeCC
Q psy9182         315 EAVLHLRFS--NGMMVTCS--------K--DRSIAVWDMVSPNEI--TLRRVLVGHRAAVNVVDF----DEKYIVSASGD  376 (486)
Q Consensus       315 ~~i~~~~~~--~~~l~~~~--------~--dg~i~i~d~~~~~~~--~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d  376 (486)
                      ..++.++.+  +.+++++-        .  .-.+++|-......-  ........|...+.+..+    ....+++++.|
T Consensus       399 v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~d  478 (792)
T KOG1963|consen  399 VGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVD  478 (792)
T ss_pred             EeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccC
Confidence            123333332  34555542        2  235677876544322  122344567766666555    23378999999


Q ss_pred             CcEEEEECCCc----------eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC-CeeeEEecCcccCeEEE
Q psy9182         377 RTIKVWNTSSC----------EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCI  443 (486)
Q Consensus       377 ~~i~iwd~~~~----------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~h~~~v~~~  443 (486)
                      |.+++|-+...          .+...-.-|..++++..|+  | -+++.+.|++|.+||..+ .+.......-..++..+
T Consensus       479 g~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dG-slla~s~~~~Itiwd~~~~~~l~~~~~~~~~~~~~~  557 (792)
T KOG1963|consen  479 GDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDG-SLLAVSFDDTITIWDYDTKNELLCTEGSRNWPIAEL  557 (792)
T ss_pred             CeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCC-cEEEEecCCEEEEecCCChhhhhccccccccchHhH
Confidence            99999987332          2222222366777777774  5 455666789999999988 44333333223344444


Q ss_pred             EecC----CEEEEEeCCCcEEEEeCCCC
Q psy9182         444 RFDA----KRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       444 ~~~~----~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+.+    ...+.......+.+|++-..
T Consensus       558 ~~~~~~~~~~~~~~~~~~~l~~WNll~~  585 (792)
T KOG1963|consen  558 LFTAQTQNDGALVHATQQRLSVWNLLSM  585 (792)
T ss_pred             hhhcccccccceeeccCceEehHhhhhh
Confidence            4411    22233344677888887653

>KOG4227|consensus

Probab=99.61  E-value=1.2e-13  Score=120.29  Aligned_cols=278  Identities=16%  Similarity=0.257  Sum_probs=187.3

Q ss_pred             ccccccccCCccCcceEEEeecCceeeeccccc------ccceeeec-CcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS------CEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~------~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      |..-|.++.|+.++++|++|+.|..+++|++..      -+++.... .|...|.|++|+               .....
T Consensus        55 H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~---------------~~N~~  119 (609)
T KOG4227|consen   55 HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFD---------------LENRF  119 (609)
T ss_pred             hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEc---------------cCCee
Confidence            456678889999999999999999999999853      34455443 456899999997               35566


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeCCCEEEEEecC
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYDDHKIVSGLRD  253 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~d  253 (486)
                      +++|..+++|..-|+++........                             .......++  ..+|-.+.+++.+.+
T Consensus       120 ~~SG~~~~~VI~HDiEt~qsi~V~~-----------------------------~~~~~~~VY~m~~~P~DN~~~~~t~~  170 (609)
T KOG4227|consen  120 LYSGERWGTVIKHDIETKQSIYVAN-----------------------------ENNNRGDVYHMDQHPTDNTLIVVTRA  170 (609)
T ss_pred             EecCCCcceeEeeecccceeeeeec-----------------------------ccCcccceeecccCCCCceEEEEecC
Confidence            8889999999999986644322211                             112223333  345667889999999


Q ss_pred             CeEEEEECCCce-eeE--EEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcE-EEE------ecccCccEEEE
Q psy9182         254 NTIKVWDRVSLQ-CIK--VLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEM-VNT------LIHHCEAVLHL  320 (486)
Q Consensus       254 g~i~i~d~~~~~-~~~--~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~-~~~------~~~~~~~i~~~  320 (486)
                      |.|.+||.+... ...  ...........+.|   .+.+|++++..+-+-+||++..+. +..      ++.....-..+
T Consensus       171 ~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~  250 (609)
T KOG4227|consen  171 KLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGS  250 (609)
T ss_pred             ceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhhe
Confidence            999999987654 211  11223344455666   467899999999999999975432 111      11112223456


Q ss_pred             EEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeee----cCcccEEEEEe-CCCEEEEEeCCCcEEEEECCC-------
Q psy9182         321 RFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLV----GHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSS-------  386 (486)
Q Consensus       321 ~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~-------  386 (486)
                      .|++  +.+.+.-....-.+||+-+...........    .....+.++.| +...+++|+.+-.|++|.+..       
T Consensus       251 ~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~  330 (609)
T KOG4227|consen  251 LWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGF  330 (609)
T ss_pred             eeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCc
Confidence            6664  366666666666678877655432211100    01234556777 666799999999999998642       


Q ss_pred             ----------------ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182         387 ----------------CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       387 ----------------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~  424 (486)
                                      .+.+..+++|...+..+.|+  ..+|++.+..+.+++|.-
T Consensus       331 ~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  331 TQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             cccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence                            12345678999988888885  678888889999999975

>KOG1272|consensus

Probab=99.60  E-value=2.7e-15  Score=133.29  Aligned_cols=219  Identities=16%  Similarity=0.261  Sum_probs=175.0

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE  315 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  315 (486)
                      +.++-+|.+++.|+..|.|..+|..+++....+. -...|..+.|  +.++++++ ....++|||- .|..++.+..+ .
T Consensus       135 ~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~-~GtElHClk~~-~  210 (545)
T KOG1272|consen  135 LDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVA-QKKYVYVYDN-NGTELHCLKRH-I  210 (545)
T ss_pred             eeecCCccEEEecCCccceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhh-hhceEEEecC-CCcEEeehhhc-C
Confidence            3455689999999999999999999999888876 3456788888  45555554 5678999994 57777777663 5


Q ss_pred             cEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         316 AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       316 ~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      .|..+.|-|.  +|++++..|.++.-|+..++.+....   ...+.+..+.-  -+..+-+|...|+|.+|.....+++.
T Consensus       211 ~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~---t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLv  287 (545)
T KOG1272|consen  211 RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIR---TGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLV  287 (545)
T ss_pred             chhhhcccchhheeeecccCCceEEEeechhhhhHHHH---ccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHH
Confidence            6888888876  67788899999999999988664333   23334444443  45677889999999999999999999


Q ss_pred             EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeC
Q psy9182         392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl  464 (486)
                      .+-.|.++|.+++++  |+|+++.+.|..++|||++.-..+.++.. ..+...+++..+-+++.|....|.||.=
T Consensus       288 KiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~SqkglLA~~~G~~v~iw~d  361 (545)
T KOG1272|consen  288 KILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGLLALSYGDHVQIWKD  361 (545)
T ss_pred             HHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccceeeecCCeeeeehh
Confidence            999999999999996  89999999999999999998877776655 4567888896666777777788999973

>KOG1310|consensus

Probab=99.60  E-value=7.2e-14  Score=126.85  Aligned_cols=212  Identities=17%  Similarity=0.280  Sum_probs=138.7

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ..|+.-|.|+.++.+|.+|++|+.|-.+.|||....+++..+. ||...|.++.|-|.             .++..+++|
T Consensus        47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~-------------tnnriv~sg  113 (758)
T KOG1310|consen   47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY-------------TNNRIVLSG  113 (758)
T ss_pred             ccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc-------------CCCeEEEec
Confidence            4677889999999999999999999999999999888888874 89999999999754             456778999


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC-CEEEEEecCCeEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD-HKIVSGLRDNTIKV  258 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i  258 (486)
                      +.|..|+++|++..+....-...        ......|          .|+.. ...-++..+++ ..+.+++.||+|+-
T Consensus       114 AgDk~i~lfdl~~~~~~~~d~~~--------~~~~~~~----------~cht~-rVKria~~p~~PhtfwsasEDGtirQ  174 (758)
T KOG1310|consen  114 AGDKLIKLFDLDSSKEGGMDHGM--------EETTRCW----------SCHTD-RVKRIATAPNGPHTFWSASEDGTIRQ  174 (758)
T ss_pred             cCcceEEEEecccccccccccCc--------cchhhhh----------hhhhh-hhhheecCCCCCceEEEecCCcceee
Confidence            99999999998653322111100        0000111          11111 11112334444 77999999999999


Q ss_pred             EECCCceee-------EE---EcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCC--------Cc----------EE
Q psy9182         259 WDRVSLQCI-------KV---LTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNT--------GE----------MV  307 (486)
Q Consensus       259 ~d~~~~~~~-------~~---~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~--------~~----------~~  307 (486)
                      +|++....-       ..   +...--...|+..   +..+|++|+.|-..++||.+.        +.          ++
T Consensus       175 yDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv  254 (758)
T KOG1310|consen  175 YDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCV  254 (758)
T ss_pred             ecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchh
Confidence            998763211       11   1111122345544   678999999999999999531        11          12


Q ss_pred             EEec-ccC--------c---cEEEEEEcCC--eEEEEeCCCcEEEEECCCC
Q psy9182         308 NTLI-HHC--------E---AVLHLRFSNG--MMVTCSKDRSIAVWDMVSP  344 (486)
Q Consensus       308 ~~~~-~~~--------~---~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~  344 (486)
                      ..+. +|.        .   .++.+.|+|+  .+++.-....|+++|+..+
T Consensus       255 ~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~  305 (758)
T KOG1310|consen  255 RYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNED  305 (758)
T ss_pred             heecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCC
Confidence            2221 111        1   2455677776  6666666668899887543

>KOG1524|consensus

Probab=99.60  E-value=1.3e-13  Score=124.95  Aligned_cols=198  Identities=15%  Similarity=0.285  Sum_probs=152.0

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEE
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR  321 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~  321 (486)
                      ...++.++.||.+.|.+ +.++..+.+..|.+.+.|-.|  ||.-|++++.||.|++|. ++|....++.....+|.|++
T Consensus        75 ~d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~  152 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCAR  152 (737)
T ss_pred             cceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEE
Confidence            34688889999999986 567777888999999999888  889999999999999999 45666556666678899999


Q ss_pred             EcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         322 FSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       322 ~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      |.|+   .+++  ..+.+.|=-+.....+   -....|.+-|.+++|  ..+.+++|+.|-..++||.. |..+..-..|
T Consensus       153 W~p~S~~vl~c--~g~h~~IKpL~~n~k~---i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~  226 (737)
T KOG1524|consen  153 WAPNSNSIVFC--QGGHISIKPLAANSKI---IRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAE  226 (737)
T ss_pred             ECCCCCceEEe--cCCeEEEeecccccce---eEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChh
Confidence            9865   4443  3445555444443332   345689999999999  56899999999999999954 6777888889


Q ss_pred             cccEEEEEeCCC-EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEE
Q psy9182         397 KRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKV  461 (486)
Q Consensus       397 ~~~v~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~i  461 (486)
                      ..+|++++|+.. .++.++ -++++           .-+...+.|..++|  ||..++.|...|.+.+
T Consensus       227 ey~ITSva~npd~~~~v~S-~nt~R-----------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  227 EYAITSVAFNPEKDYLLWS-YNTAR-----------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             ccceeeeeeccccceeeee-eeeee-----------ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence            999999999854 344443 23333           22334577889999  9999999998887654

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.58  E-value=2.9e-12  Score=121.76  Aligned_cols=225  Identities=12%  Similarity=0.073  Sum_probs=157.1

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE----
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV----  317 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i----  317 (486)
                      .++..+++++.+|.+..+|..+|+.+................+..++.++.+|.++.||.++|+.+.++.......    
T Consensus       103 v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~  182 (377)
T TIGR03300       103 ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRG  182 (377)
T ss_pred             EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecC
Confidence            3677888999999999999999998877654322222222356678888889999999999999888775433221    


Q ss_pred             -EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCc-c------cE-EEEEeCCCEEEEEeCCCcEEEEECCCce
Q psy9182         318 -LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR-A------AV-NVVDFDEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       318 -~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~------~v-~~~~~~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                       ......++.++++..++.+..+|.++++..-......... .      .+ ......+..+++++.+|.++.||.++++
T Consensus       183 ~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~  262 (377)
T TIGR03300       183 SASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGR  262 (377)
T ss_pred             CCCCEEECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCc
Confidence             1222345678888899999999998887543221110000 0      01 1112256788888899999999999998


Q ss_pred             EEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCc-ccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         389 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+......  ........+..++.++.||.|..+|..+|+.+...... .....+....++.|++++.||.|+++|..++
T Consensus       263 ~~W~~~~~--~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG  340 (377)
T TIGR03300       263 VLWKRDAS--SYQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDG  340 (377)
T ss_pred             EEEeeccC--CccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCC
Confidence            87766521  22334456788888899999999999999988766322 2223344446789999999999999998876


Q ss_pred             C
Q psy9182         468 L  468 (486)
Q Consensus       468 ~  468 (486)
                      .
T Consensus       341 ~  341 (377)
T TIGR03300       341 S  341 (377)
T ss_pred             C
Confidence            4

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1445|consensus

Probab=99.58  E-value=5.5e-14  Score=129.71  Aligned_cols=223  Identities=18%  Similarity=0.311  Sum_probs=158.1

Q ss_pred             CCCEEEE--EecCCeEEEEECCC-ceeeE-EEc--CCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC-------cE
Q psy9182         243 DDHKIVS--GLRDNTIKVWDRVS-LQCIK-VLT--GHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG-------EM  306 (486)
Q Consensus       243 ~~~~l~~--~~~dg~i~i~d~~~-~~~~~-~~~--~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~-------~~  306 (486)
                      +..++++  .+..|.|-||++.. |+.-. .+.  .....|+.+.|   |...|++++.||.|++|.+..+       ++
T Consensus       590 n~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tP  669 (1012)
T KOG1445|consen  590 NNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTP  669 (1012)
T ss_pred             ccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCc
Confidence            4445543  45678999999865 22211 111  13456889988   6789999999999999998754       34


Q ss_pred             EEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182         307 VNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV  381 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i  381 (486)
                      ...+..|...|+++.|+|   +.|++++.|.+|++||+++....   ..+.+|...|..++|  +|+.+++.+.||+|++
T Consensus       670 e~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~---~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rV  746 (1012)
T KOG1445|consen  670 EKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLY---SRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRV  746 (1012)
T ss_pred             ceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhh---heeccCcCceeEEEECCCCcceeeeecCceEEE
Confidence            567788999999999996   69999999999999999988654   567799999999999  8999999999999999


Q ss_pred             EECCCceE-EEEEcCCc---ccEEEEEeCCCEEEEEeCC----CcEEEEECCCC--eeeEEe--cCccc-CeEEEEecCC
Q psy9182         382 WNTSSCEF-VRTLNGHK---RGIACLQYRDRLVVSGSSD----NTIRLWDIECG--ACLRVL--EGHEE-LVRCIRFDAK  448 (486)
Q Consensus       382 wd~~~~~~-~~~~~~~~---~~v~~~~~~~~~l~~~~~d----g~v~iwd~~~~--~~~~~~--~~h~~-~v~~~~~~~~  448 (486)
                      |+.++++. ++.-++..   +.-...+.+|+++++.+.|    ..|.+||.++-  ..+.+.  ....+ -|..-..|.+
T Consensus       747 y~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~  826 (1012)
T KOG1445|consen  747 YEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSN  826 (1012)
T ss_pred             eCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCc
Confidence            99987643 33333222   2222334478888877765    56888887652  233322  11111 1222223444


Q ss_pred             -EEEEEeCCCcEEEEeCCCCC
Q psy9182         449 -RIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       449 -~l~s~~~dg~v~iwdl~~~~  468 (486)
                       .+++|-.|..|.+|.+-...
T Consensus       827 ~lfltGKGD~~v~~yEv~~es  847 (1012)
T KOG1445|consen  827 VLFLTGKGDRFVNMYEVIYES  847 (1012)
T ss_pred             eEEEecCCCceEEEEEecCCC
Confidence             47788889999999986543

>KOG1240|consensus

Probab=99.57  E-value=9.3e-13  Score=130.51  Aligned_cols=254  Identities=17%  Similarity=0.225  Sum_probs=171.5

Q ss_pred             cccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc-------eeeEEEcCCcccEEEEEe--cCC
Q psy9182         215 NNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL-------QCIKVLTGHTGSVLCLQY--DER  285 (486)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~--~~~  285 (486)
                      ..|+.....+..+..+......+...++++.++++|+.||+|++||....       +...++......+.++..  .++
T Consensus      1032 ~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1032 PGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred             CCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC
Confidence            34777777777776666555555555567799999999999999997542       222333334556666655  789


Q ss_pred             EEEEEeCCCcEEEEECCCCc-------EEEEecc-cCccEEEEE-Ec---CC-eEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         286 VIISGSSDSTVRVWDVNTGE-------MVNTLIH-HCEAVLHLR-FS---NG-MMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       286 ~l~~~~~dg~i~vwd~~~~~-------~~~~~~~-~~~~i~~~~-~~---~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                      .+|+++.||.|++.++....       ..+.... ..+.+.++. +.   .. .++.+...+.|..||++........+ 
T Consensus      1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk- 1190 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK- 1190 (1431)
T ss_pred             eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh-
Confidence            99999999999999987521       1111111 233344443 22   23 78888899999999998866543222 


Q ss_pred             eecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc-CCcccEEEEEeC---C--CEEEE-Ee-CCCcEEEE
Q psy9182         353 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYR---D--RLVVS-GS-SDNTIRLW  422 (486)
Q Consensus       353 ~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~---~--~~l~~-~~-~dg~v~iw  422 (486)
                      .....+.|+++..  .++++++|+..|.+.+||++-+.++..+. .+..++..+..+   +  ...++ ++ ..+.|.+|
T Consensus      1191 ~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1191 NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred             cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee
Confidence            2334567777776  57899999999999999999888888776 344556555543   2  44444 44 57889999


Q ss_pred             ECCCCeeeEEecCc-c----------------c--CeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         423 DIECGACLRVLEGH-E----------------E--LVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       423 d~~~~~~~~~~~~h-~----------------~--~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ++.+|.+...+... .                .  ......+  -+..+.+|+.|+.|+.||......
T Consensus      1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ 1338 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEI 1338 (1431)
T ss_pred             ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCccc
Confidence            99998776665432 0                0  1111222  456789999999999999876543

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.57  E-value=1e-11  Score=115.75  Aligned_cols=227  Identities=16%  Similarity=0.255  Sum_probs=138.5

Q ss_pred             ceEEEEeCCCEEEEEe-cCCeEEEEECC-Ccee--eEEEcCCcccEEEEEe--cCCEEEEEeC-CCcEEEEECCC-C---
Q psy9182         236 GVYCLQYDDHKIVSGL-RDNTIKVWDRV-SLQC--IKVLTGHTGSVLCLQY--DERVIISGSS-DSTVRVWDVNT-G---  304 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~-~---  304 (486)
                      ..+++++++++|++++ .++.|.+|++. +++.  ..... ..+....+.+  +++++++++. ++.|.+|++.+ +   
T Consensus        38 ~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~  116 (330)
T PRK11028         38 QPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPV  116 (330)
T ss_pred             ccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCC
Confidence            3457889999887764 57889999986 3332  22222 2223445655  6788877764 78999999964 2   


Q ss_pred             cEEEEecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCceee-----EEeeecCcccEEEEEe--CCCEEEEEe
Q psy9182         305 EMVNTLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNEITL-----RRVLVGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       305 ~~~~~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      +.+..+.. ......+.++++  ++ ++...++.|.+||+.+...+..     .....+  .....+.+  ++++++++.
T Consensus       117 ~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g--~~p~~~~~~pdg~~lyv~~  193 (330)
T PRK11028        117 APIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEG--AGPRHMVFHPNQQYAYCVN  193 (330)
T ss_pred             CceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCC--CCCceEEECCCCCEEEEEe
Confidence            22232222 233455667754  55 4555679999999976432211     111112  22334444  888988887


Q ss_pred             C-CCcEEEEECCC--c--eEEEEEcCCc------ccEEE--EEeCCCEEEEEe-CCCcEEEEECCCCeeeEEecCcc---
Q psy9182         375 G-DRTIKVWNTSS--C--EFVRTLNGHK------RGIAC--LQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHE---  437 (486)
Q Consensus       375 ~-d~~i~iwd~~~--~--~~~~~~~~~~------~~v~~--~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~---  437 (486)
                      . ++.|.+||+..  +  +.+..+....      .....  +..++++++++. .++.|.+|++........+.++.   
T Consensus       194 ~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~  273 (330)
T PRK11028        194 ELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTE  273 (330)
T ss_pred             cCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecc
Confidence            6 89999999873  2  3344443221      11123  345688888875 47899999996533222222221   


Q ss_pred             cCeEEEEe--cCCEEEEEeC-CCcEEEEeCCC
Q psy9182         438 ELVRCIRF--DAKRIVSGAY-DGKIKVWNLVA  466 (486)
Q Consensus       438 ~~v~~~~~--~~~~l~s~~~-dg~v~iwdl~~  466 (486)
                      .....+.+  ||++|++++. +++|.+|+++.
T Consensus       274 ~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        274 TQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             ccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            23446666  8999888775 89999999864

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.53  E-value=3.6e-11  Score=114.70  Aligned_cols=307  Identities=10%  Similarity=0.051  Sum_probs=194.3

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcccceeEEEee-cceeEecCCCCceeccCcceeecCCCCCcceeeecccc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNY  193 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~-~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~  193 (486)
                      .+..+++++.+|.+.-+|..+|+.+....-.... ..+... +.. +    .+.+.+ ++..++.++.+|.+..+|..++
T Consensus        68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~-~~~~~~~~~~-~----~~~~~v-~~~~v~v~~~~g~l~ald~~tG  140 (394)
T PRK11138         68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKD-GWFSKNKSAL-L----SGGVTV-AGGKVYIGSEKGQVYALNAEDG  140 (394)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcc-cccccccccc-c----ccccEE-ECCEEEEEcCCCEEEEEECCCC
Confidence            4667888888999999999999988776432210 000000 000 0    011111 2344556677888888887766


Q ss_pred             cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182         194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                      +..........                           .....+    ..+..++++..+|.+..+|..+|+.+..+...
T Consensus       141 ~~~W~~~~~~~---------------------------~~ssP~----v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~  189 (394)
T PRK11138        141 EVAWQTKVAGE---------------------------ALSRPV----VSDGLVLVHTSNGMLQALNESDGAVKWTVNLD  189 (394)
T ss_pred             CCcccccCCCc---------------------------eecCCE----EECCEEEEECCCCEEEEEEccCCCEeeeecCC
Confidence            65443321110                           000011    13456777888999999999999998877643


Q ss_pred             cccE-----EEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCc-----------cEEEEEEcCCeEEEEeCCCcEE
Q psy9182         274 TGSV-----LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE-----------AVLHLRFSNGMMVTCSKDRSIA  337 (486)
Q Consensus       274 ~~~v-----~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----------~i~~~~~~~~~l~~~~~dg~i~  337 (486)
                      ....     .+-...+..++.++.+|.+..+|..+|+.+........           ........++.+++++.+|.+.
T Consensus       190 ~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~  269 (394)
T PRK11138        190 VPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLV  269 (394)
T ss_pred             CCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEE
Confidence            1111     11112345677788899999999999987765432110           0112223467888888999999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-ccEEEEEeCCCEEEEEeCC
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSD  416 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~d  416 (486)
                      .+|..+++..-... . +   ....+...+..++.++.+|.+..+|..+++.+-....-. .........+..++.++.|
T Consensus       270 ald~~tG~~~W~~~-~-~---~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~  344 (394)
T PRK11138        270 ALDLRSGQIVWKRE-Y-G---SVNDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSE  344 (394)
T ss_pred             EEECCCCCEEEeec-C-C---CccCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCC
Confidence            99999987543221 1 1   112234467788888899999999999998765543211 1222333357788899999


Q ss_pred             CcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEeC
Q psy9182         417 NTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       417 g~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwdl  464 (486)
                      |.|.+.|..+|+.+...+-....+. +..+.++.|+.++.||.|..+++
T Consensus       345 G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        345 GYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             CEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeCCceEEEEeC
Confidence            9999999999999888765433333 23345668999999999998875

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.53  E-value=3.1e-11  Score=112.49  Aligned_cols=263  Identities=12%  Similarity=0.178  Sum_probs=151.0

Q ss_pred             EEEeecCceeeeccccc-cc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC-CCCCcceeeeccccc
Q psy9182         119 IVSASGDRTIKVWNTSS-CE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS-SHDDTILIWDFLNYS  194 (486)
Q Consensus       119 l~tg~~dg~v~iWd~~~-~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~-s~dg~i~vWd~~~~~  194 (486)
                      .++...++.|.+||+.+ ++  .+..+.. .+....++++               ++++.|+.+ ..++.|.+|+++...
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~s---------------pd~~~lyv~~~~~~~i~~~~~~~~g   68 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVVDV-PGQVQPMVIS---------------PDKRHLYVGVRPEFRVLSYRIADDG   68 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEEec-CCCCccEEEC---------------CCCCEEEEEECCCCcEEEEEECCCC
Confidence            34446789999999964 43  4455542 3455667776               455555443 457888899974211


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCeEEEEECCC-c---eeeEE
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDRVS-L---QCIKV  269 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~-~---~~~~~  269 (486)
                      ...                         ...... . .....-++++++++++++++. ++.|.+|++.+ +   +.+..
T Consensus        69 ~l~-------------------------~~~~~~-~-~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~  121 (330)
T PRK11028         69 ALT-------------------------FAAESP-L-PGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQI  121 (330)
T ss_pred             ceE-------------------------Eeeeec-C-CCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceee
Confidence            000                         000111 0 112234667889998887764 88999999864 2   22333


Q ss_pred             EcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCcEEEE-----ec-ccCccEEEEEEcCC--eEEEEeC-CCcEE
Q psy9182         270 LTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGEMVNT-----LI-HHCEAVLHLRFSNG--MMVTCSK-DRSIA  337 (486)
Q Consensus       270 ~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~~~~~-----~~-~~~~~i~~~~~~~~--~l~~~~~-dg~i~  337 (486)
                      +.+. ....++.+  +++++++++ .++.|.+||+.+...+..     .. ........+.|+++  +++++.. ++.|.
T Consensus       122 ~~~~-~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~  200 (330)
T PRK11028        122 IEGL-EGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVD  200 (330)
T ss_pred             ccCC-CcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEE
Confidence            3322 22344444  777776554 569999999976332211     11 11234567788765  6766665 89999


Q ss_pred             EEECCCC-CceeeEEeeecC------cccEEEEE--eCCCEEEEEeC-CCcEEEEECCCce----EEEEEcCC-cccEEE
Q psy9182         338 VWDMVSP-NEITLRRVLVGH------RAAVNVVD--FDEKYIVSASG-DRTIKVWNTSSCE----FVRTLNGH-KRGIAC  402 (486)
Q Consensus       338 i~d~~~~-~~~~~~~~~~~~------~~~v~~~~--~~~~~l~~~~~-d~~i~iwd~~~~~----~~~~~~~~-~~~v~~  402 (486)
                      +||+... ............      ......+.  .++++++++.. ++.|.+|++....    .+...... ...-..
T Consensus       201 v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~  280 (330)
T PRK11028        201 VWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFN  280 (330)
T ss_pred             EEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceE
Confidence            9999742 122222222111      11122333  48888888854 7899999986432    22222221 111223


Q ss_pred             EEeCCCEEEEEeC-CCcEEEEECC
Q psy9182         403 LQYRDRLVVSGSS-DNTIRLWDIE  425 (486)
Q Consensus       403 ~~~~~~~l~~~~~-dg~v~iwd~~  425 (486)
                      +..+|++|+++.. +++|.+|++.
T Consensus       281 ~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        281 IDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             ECCCCCEEEEEEccCCcEEEEEEc
Confidence            4456888887775 8999999874

>KOG2394|consensus

Probab=99.53  E-value=3.7e-13  Score=122.07  Aligned_cols=212  Identities=16%  Similarity=0.371  Sum_probs=149.4

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEc----CCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLT----GHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      +.+--+++|-..|.|.+.|....+..+.+.    -....|+|+.|   +...++++-.+|.+++||..-.      ....
T Consensus       183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~------~~~t  256 (636)
T KOG2394|consen  183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIV------CGAT  256 (636)
T ss_pred             CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecccc------ccCC
Confidence            345568888889999999876533322221    13467899999   6678888899999999997211      0001


Q ss_pred             ccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      .+-....-.++.+.....-+.      .+...+.....   ....|..++|  ||++||+.+.||.++|||..+.+++..
T Consensus       257 ~p~~~~~k~~~~f~i~t~ksk------~~rNPv~~w~~---~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~  327 (636)
T KOG2394|consen  257 APSYQALKDGDQFAILTSKSK------KTRNPVARWHI---GEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGV  327 (636)
T ss_pred             CCcccccCCCCeeEEeeeecc------ccCCccceeEe---ccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHH
Confidence            111111112333333221110      01111211121   2336666666  899999999999999999999888888


Q ss_pred             EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecC-----------------------
Q psy9182         393 LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA-----------------------  447 (486)
Q Consensus       393 ~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-----------------------  447 (486)
                      ++.--+...|++|  ||++|++|++|..|.||.+..++.+..-++|.++|+.|+||+                       
T Consensus       328 mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~  407 (636)
T KOG2394|consen  328 MKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAH  407 (636)
T ss_pred             HHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhc
Confidence            8877888899988  599999999999999999999999999999999999999971                       


Q ss_pred             ---------------------------CEEEEEeCCCcEEEEeCCCCC
Q psy9182         448 ---------------------------KRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       448 ---------------------------~~l~s~~~dg~v~iwdl~~~~  468 (486)
                                                 -++.+.+.|-.+.+||+....
T Consensus       408 ~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~  455 (636)
T KOG2394|consen  408 DFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDV  455 (636)
T ss_pred             ccccccCCCCCcCCCcccccccccceEEEeecccccceEEEEecchhh
Confidence                                       147888999999999998764

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.52  E-value=2.2e-11  Score=113.38  Aligned_cols=306  Identities=15%  Similarity=0.174  Sum_probs=186.0

Q ss_pred             eEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccc
Q psy9182         118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETP  197 (486)
Q Consensus       118 ~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~  197 (486)
                      ++++-..+|.|.|.|..+.+.+..+......-..+.|+               +|+++++.++.||.|.++|+.+.+.. 
T Consensus         8 ~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s---------------~Dgr~~yv~~rdg~vsviD~~~~~~v-   71 (369)
T PF02239_consen    8 FYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFS---------------PDGRYLYVANRDGTVSVIDLATGKVV-   71 (369)
T ss_dssp             EEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-T---------------T-SSEEEEEETTSEEEEEETTSSSEE-
T ss_pred             EEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEec---------------CCCCEEEEEcCCCeEEEEECCcccEE-
Confidence            44567788999999999999999998654332335554               57778888888999999998664422 


Q ss_pred             cCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEECCCceeeEEEcCC---
Q psy9182         198 IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDRVSLQCIKVLTGH---  273 (486)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~---  273 (486)
                                                 ..+..  +....-.++++||++++++. ..+.+.++|..+.+.++.+...   
T Consensus        72 ---------------------------~~i~~--G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~  122 (369)
T PF02239_consen   72 ---------------------------ATIKV--GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMP  122 (369)
T ss_dssp             ---------------------------EEEE---SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-
T ss_pred             ---------------------------EEEec--CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccccccc
Confidence                                       22221  23344577889999988775 6889999999999999887643   


Q ss_pred             ----cccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCcEEE-EecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECC
Q psy9182         274 ----TGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGEMVN-TLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMV  342 (486)
Q Consensus       274 ----~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~  342 (486)
                          ...+.++..  ... ++++.-..+.|.+.|....+.+. .............|+++  ++ ++...++.|-++|..
T Consensus       123 ~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~  202 (369)
T PF02239_consen  123 VDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK  202 (369)
T ss_dssp             TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred             ccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeec
Confidence                234555543  444 44444445888888987654332 22223445667778765  44 445567789999988


Q ss_pred             CCCceeeEEe-eecCcccEE-----------EEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE-EEEeCCCE
Q psy9182         343 SPNEITLRRV-LVGHRAAVN-----------VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDRL  409 (486)
Q Consensus       343 ~~~~~~~~~~-~~~~~~~v~-----------~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~  409 (486)
                      +++....... ...|.....           ...-.+...++.-....+.+||..+.+.++++.....++. ...+++++
T Consensus       203 ~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~  282 (369)
T PF02239_consen  203 TGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRY  282 (369)
T ss_dssp             TTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SE
T ss_pred             cceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCcc
Confidence            7765433221 111222222           2222333332333334667899999999999997776643 33456889


Q ss_pred             EEEE----eCCCcEEEEECCCCeeeEEecCcc-cCeEEEEe--cCCEEEEEeC--CCcEEEEeCCCCC
Q psy9182         410 VVSG----SSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DAKRIVSGAY--DGKIKVWNLVAAL  468 (486)
Q Consensus       410 l~~~----~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~l~s~~~--dg~v~iwdl~~~~  468 (486)
                      +++.    ...+.|.++|.++.+.+..+.... ..+..+.|  ||+++..+..  +|.|.+||..+..
T Consensus       283 vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~  350 (369)
T PF02239_consen  283 VWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLK  350 (369)
T ss_dssp             EEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred             EEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcE
Confidence            8887    455899999999998887775332 35888899  8887555443  3369999988654

...

>KOG1272|consensus

Probab=99.51  E-value=1.7e-14  Score=128.20  Aligned_cols=192  Identities=19%  Similarity=0.293  Sum_probs=157.4

Q ss_pred             EEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeee
Q psy9182         278 LCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLV  354 (486)
Q Consensus       278 ~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  354 (486)
                      ..+.+  +|.+++.|+..|.|..+|..++++...+.. ...|.++.|- +..+++......++|||-... ++.+..   
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~Gt-ElHClk---  207 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQKKYVYVYDNNGT-ELHCLK---  207 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhhhceEEEecCCCc-EEeehh---
Confidence            44555  899999999999999999999998888765 4567888875 446666677889999996543 332222   


Q ss_pred             cCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeee
Q psy9182         355 GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL  430 (486)
Q Consensus       355 ~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~  430 (486)
                       ....|..+.|  ..-+|++++..|.++.-|+.+|+.+..+....+.+..+.-+  +..+-+|...|+|.+|.....+++
T Consensus       208 -~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePL  286 (545)
T KOG1272|consen  208 -RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPL  286 (545)
T ss_pred             -hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchH
Confidence             2356667777  45578888899999999999999999999888888777765  567889999999999999999999


Q ss_pred             EEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCCCCcc
Q psy9182         431 RVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTT  475 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~~~~~  475 (486)
                      ..+-.|.++|.+|++  +|++++|+|.|..++|||++.-.++.+..+
T Consensus       287 vKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t  333 (545)
T KOG1272|consen  287 VKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT  333 (545)
T ss_pred             HHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence            999999999999999  899999999999999999998776654433

>KOG1523|consensus

Probab=99.51  E-value=3e-12  Score=109.02  Aligned_cols=220  Identities=15%  Similarity=0.178  Sum_probs=154.6

Q ss_pred             ccccccccCCccCcceEEEeecCceeeeccccccc---ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~---~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      +...|+|.++++|+..+|.+.....|.|+.....+   ..++++.|...|+++.|.               +..+.|+++
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWa---------------p~snrIvtc   73 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWA---------------PKSNRIVTC   73 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeec---------------CCCCceeEc
Confidence            34578999999999999999999999999987654   678899999999999886               344556666


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                      +.|..-.+|....                                                            +      
T Consensus        74 s~drnayVw~~~~------------------------------------------------------------~------   87 (361)
T KOG1523|consen   74 SHDRNAYVWTQPS------------------------------------------------------------G------   87 (361)
T ss_pred             cCCCCccccccCC------------------------------------------------------------C------
Confidence            6666666665310                                                            0      


Q ss_pred             ECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE----EEecccCccEEEEEEcCC--eEEEEe
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV----NTLIHHCEAVLHLRFSNG--MMVTCS  331 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~~~~i~~~~~~~~--~l~~~~  331 (486)
                        .+.++.-.+..++...+++.|  .++.+++|+....|.||-.+..+--    +.-+.+...|.++.|+++  ++++|+
T Consensus        88 --~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs  165 (361)
T KOG1523|consen   88 --GTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGS  165 (361)
T ss_pred             --CeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccc
Confidence              112333444557788899999  6789999999999999987654322    122445678999999876  888999


Q ss_pred             CCCcEEEEECC-----CCCce----------eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce-EEEEE
Q psy9182         332 KDRSIAVWDMV-----SPNEI----------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE-FVRTL  393 (486)
Q Consensus       332 ~dg~i~i~d~~-----~~~~~----------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~-~~~~~  393 (486)
                      .|+..+++..-     .....          .+........+.+..+.|  +|+.|+-.+.|..+.+-|..... .+...
T Consensus       166 ~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~  245 (361)
T KOG1523|consen  166 TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSV  245 (361)
T ss_pred             cCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccch
Confidence            99999998642     11100          001112245677888888  69999999999999999977654 33443


Q ss_pred             cCCcccEEEEEe
Q psy9182         394 NGHKRGIACLQY  405 (486)
Q Consensus       394 ~~~~~~v~~~~~  405 (486)
                      ....-+..++.|
T Consensus       246 ~~~~lP~ls~~~  257 (361)
T KOG1523|consen  246 ATAQLPLLSVSW  257 (361)
T ss_pred             hhccCCceeeEe
Confidence            333345555554

>KOG0771|consensus

Probab=99.50  E-value=3.8e-13  Score=118.62  Aligned_cols=193  Identities=17%  Similarity=0.203  Sum_probs=133.7

Q ss_pred             cccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCccee
Q psy9182         108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILI  187 (486)
Q Consensus       108 ~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~v  187 (486)
                      -+++++.+|..|++|+.||++|||++.....+.....|...|.++.|+               +|++.|++.+.| ..+|
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS---------------~dgk~lasig~d-~~~V  211 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFS---------------PDGKFLASIGAD-SARV  211 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeC---------------CCCcEEEEecCC-ceEE
Confidence            567889999999999999999999998888888889999999999998               688899999999 9999


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC---C-EEE-EEecCCeEEEEECC
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD---H-KIV-SGLRDNTIKVWDRV  262 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~-~l~-~~~~dg~i~i~d~~  262 (486)
                      |+.+++..........           .+|...                .+.+..++   . +++ ....-+.|+.|++.
T Consensus       212 W~~~~g~~~a~~t~~~-----------k~~~~~----------------~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~  264 (398)
T KOG0771|consen  212 WSVNTGAALARKTPFS-----------KDEMFS----------------SCRFSVDNAQETLRLAASQFPGGGVRLCDIS  264 (398)
T ss_pred             EEeccCchhhhcCCcc-----------cchhhh----------------hceecccCCCceEEEEEecCCCCceeEEEee
Confidence            9998764332222110           011000                01111121   1 111 12223344444433


Q ss_pred             Ccee-----eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCccEEEEEEcCC--eEEEEeC
Q psy9182         263 SLQC-----IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       263 ~~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                      ....     .+........|.+++.  +|++++.|+.||.|.+++..+.++++.. +.|...|+.+.|+|+  .++..+.
T Consensus       265 ~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs  344 (398)
T KOG0771|consen  265 LWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSS  344 (398)
T ss_pred             eeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCccccccc
Confidence            2111     1111122345777777  8999999999999999999988887766 568889999999986  6777777


Q ss_pred             CCcEEEEECCC
Q psy9182         333 DRSIAVWDMVS  343 (486)
Q Consensus       333 dg~i~i~d~~~  343 (486)
                      +....+..+.-
T Consensus       345 ~~~~~v~~l~v  355 (398)
T KOG0771|consen  345 DNEAAVTKLAV  355 (398)
T ss_pred             CCceeEEEEee
Confidence            77777766543

>KOG3881|consensus

Probab=99.50  E-value=2.5e-12  Score=112.41  Aligned_cols=210  Identities=12%  Similarity=0.226  Sum_probs=150.1

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCce----eeEEEcCCcccEEEEEe---cCCEEEEEeCC--CcEEEEECCCC
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ----CIKVLTGHTGSVLCLQY---DERVIISGSSD--STVRVWDVNTG  304 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~---~~~~l~~~~~d--g~i~vwd~~~~  304 (486)
                      ...+..+..-...|+++..+|.+.+|..+.+.    .+..+..+ ..+..+.-   +...+++|+..  ..+.+||+++.
T Consensus       105 ~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~  183 (412)
T KOG3881|consen  105 TKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS  183 (412)
T ss_pred             cccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccc
Confidence            34444555556778888999999999987433    22233322 23344433   56778889998  88999999988


Q ss_pred             cEEEEecccC---------ccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEE
Q psy9182         305 EMVNTLIHHC---------EAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV  371 (486)
Q Consensus       305 ~~~~~~~~~~---------~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  371 (486)
                      +.+.+-+.-.         -.++++.|-++    .+++++.-+.+++||.+.++.+.....+..+.-..+.+.+++++++
T Consensus       184 ~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy  263 (412)
T KOG3881|consen  184 KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIY  263 (412)
T ss_pred             eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEE
Confidence            6655443211         23466667533    8999999999999999987655433333333333334444899999


Q ss_pred             EEeCCCcEEEEECCCceEEEE-EcCCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         372 SASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      +|..-+.+..||.+.++.... +.+-.+.++.+..++  .++++++-|..|||+|+++.+++....- ...+++|-+
T Consensus       264 ~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYv-Ks~lt~il~  339 (412)
T KOG3881|consen  264 TGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYV-KSRLTFILL  339 (412)
T ss_pred             EecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhh-hccccEEEe
Confidence            999999999999999998877 889999999999875  5999999999999999998776654321 234555555

>KOG2111|consensus

Probab=99.49  E-value=9.8e-11  Score=99.89  Aligned_cols=210  Identities=13%  Similarity=0.295  Sum_probs=151.5

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC-CCcEEEEeccc--CccEEEEEEcCC--eEE
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN-TGEMVNTLIHH--CEAVLHLRFSNG--MMV  328 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~--~~~i~~~~~~~~--~l~  328 (486)
                      +.|.|||-...+++.++. ...+|.++......+++.-. +.|+||... +.+.++.+...  .....++...-+  .|+
T Consensus        75 NkviIWDD~k~~~i~el~-f~~~I~~V~l~r~riVvvl~-~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~La  152 (346)
T KOG2111|consen   75 NKVIIWDDLKERCIIELS-FNSEIKAVKLRRDRIVVVLE-NKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLA  152 (346)
T ss_pred             ceEEEEecccCcEEEEEE-eccceeeEEEcCCeEEEEec-CeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEE
Confidence            479999977777887776 56789999998888888764 679999987 44555555332  233455544332  333


Q ss_pred             -EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCc-EEEEECCCceEEEEEcC--CcccEEE
Q psy9182         329 -TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT-IKVWNTSSCEFVRTLNG--HKRGIAC  402 (486)
Q Consensus       329 -~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~--~~~~v~~  402 (486)
                       =|-.-|.|.+-|+...+.- .......|...|.+++.  +|..+|+++..|+ |||||..+|+++.+++.  ....+.|
T Consensus       153 fPg~k~GqvQi~dL~~~~~~-~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~  231 (346)
T KOG2111|consen  153 FPGFKTGQVQIVDLASTKPN-APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYC  231 (346)
T ss_pred             cCCCccceEEEEEhhhcCcC-CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEE
Confidence             2456799999999876542 22556789999999998  8999999999997 78999999999999874  3356889


Q ss_pred             EEeC--CCEEEEEeCCCcEEEEECCCCe---e---------------------eEEecCcccCeEEEEe--cCCEEEEEe
Q psy9182         403 LQYR--DRLVVSGSSDNTIRLWDIECGA---C---------------------LRVLEGHEELVRCIRF--DAKRIVSGA  454 (486)
Q Consensus       403 ~~~~--~~~l~~~~~dg~v~iwd~~~~~---~---------------------~~~~~~h~~~v~~~~~--~~~~l~s~~  454 (486)
                      ++|+  ..+||++|+.|+|+||.++...   .                     +..+.-..+..--++|  +.+.++..+
T Consensus       232 iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~  311 (346)
T KOG2111|consen  232 IAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAIC  311 (346)
T ss_pred             EEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEE
Confidence            8885  7899999999999999886422   1                     0111112334445666  447788888


Q ss_pred             CCCcEEEEeCCC
Q psy9182         455 YDGKIKVWNLVA  466 (486)
Q Consensus       455 ~dg~v~iwdl~~  466 (486)
                      .||.-+-+.+..
T Consensus       312 ~Dgsy~k~~f~~  323 (346)
T KOG2111|consen  312 ADGSYYKFKFDP  323 (346)
T ss_pred             eCCcEEEEEecc
Confidence            889876655543

>KOG2321|consensus

Probab=99.48  E-value=8.1e-12  Score=114.39  Aligned_cols=178  Identities=14%  Similarity=0.284  Sum_probs=135.5

Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEEecc------c----
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNTLIH------H----  313 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~------~----  313 (486)
                      -|+.++....|+-+|++.|..+..+....+.++++..+  ..+|++|+.+|.|..||.++...+..+..      +    
T Consensus       147 Dly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~  226 (703)
T KOG2321|consen  147 DLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGD  226 (703)
T ss_pred             cEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCcccc
Confidence            35555666689999999999999998888889888884  46888899999999999998877666532      2    


Q ss_pred             -CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---C-CCEEEEEeCCCcEEEEECCC
Q psy9182         314 -CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---D-EKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       314 -~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~-~~~l~~~~~d~~i~iwd~~~  386 (486)
                       ...|+++.|+++  .+++|+.+|.+.|||++..+++.  ..-.+...+|..+.|   + ++.+++. ....++|||-.+
T Consensus       227 ~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~--~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~  303 (703)
T KOG2321|consen  227 AAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLL--VKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECT  303 (703)
T ss_pred             ccCcceEEEecCCceeEEeeccCCcEEEEEcccCCcee--ecccCCccceeeecccccCCCceEEec-chHHhhhccccc
Confidence             234899999874  89999999999999999987653  233345667888888   2 3455554 557899999999


Q ss_pred             ceEEEEEcCCcc-cEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         387 CEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       387 ~~~~~~~~~~~~-~v~~~~~~~~~l~~~~~dg~v~iwd~~~  426 (486)
                      |+....+..... .-.|.-.++.+++++-.++.+..|=+..
T Consensus       304 Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  304 GKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             CCceeeccccCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence            999888874333 2345555788889998888877776654

>KOG0771|consensus

Probab=99.48  E-value=1.1e-12  Score=115.89  Aligned_cols=191  Identities=21%  Similarity=0.311  Sum_probs=135.7

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  311 (486)
                      ...++++..+|..+++|+.||.+|||+..+...+.....|...|.++.|  |++.|++-+.| ..+||+.+++..+....
T Consensus       146 ~~k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  146 QQKVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             cceEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            3378889999999999999999999999888888888889999999998  89999999999 89999999997666554


Q ss_pred             c--cCccEEEEEEcC-----C-eEEE-EeCCCcEEEEECCCCCc--eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182         312 H--HCEAVLHLRFSN-----G-MMVT-CSKDRSIAVWDMVSPNE--ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT  378 (486)
Q Consensus       312 ~--~~~~i~~~~~~~-----~-~l~~-~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~  378 (486)
                      .  .......+.|..     . ++++ ....+.|+.||+.....  .............|.+++.  +|++++.|+.||.
T Consensus       225 ~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGs  304 (398)
T KOG0771|consen  225 PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGS  304 (398)
T ss_pred             CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCc
Confidence            2  122234445542     1 2222 22345566666543221  1111111122335566655  8888999999999


Q ss_pred             EEEEECCCceEEEEEc-CCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         379 IKVWNTSSCEFVRTLN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      |.+++..+.+.++..+ .|...|+.+.|.  .+++++.+.|....|..+.
T Consensus       305 Vai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~  354 (398)
T KOG0771|consen  305 VAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA  354 (398)
T ss_pred             EEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence            9999888877766654 788888888874  6777777777777777664

>KOG1524|consensus

Probab=99.46  E-value=1.2e-11  Score=112.29  Aligned_cols=203  Identities=17%  Similarity=0.247  Sum_probs=150.2

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSE  195 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~  195 (486)
                      .+.++.++.||.+.|-+- .++..+.+.+|.+.|.+-.|+               +||.-|++++.||.|++|.-.....
T Consensus        75 ~d~~~i~s~DGkf~il~k-~~rVE~sv~AH~~A~~~gRW~---------------~dGtgLlt~GEDG~iKiWSrsGMLR  138 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNK-SARVERSISAHAAAISSGRWS---------------PDGAGLLTAGEDGVIKIWSRSGMLR  138 (737)
T ss_pred             cceEEEEcCCceEEEecc-cchhhhhhhhhhhhhhhcccC---------------CCCceeeeecCCceEEEEeccchHH
Confidence            456888899999999764 477888899999999999998               6888899999999999998422110


Q ss_pred             cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE--EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182         196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC--LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                      .                              ..  ......+.|  +.|+.+.++.+ ..+.+.|=-+.....+-..+.|
T Consensus       139 S------------------------------tl--~Q~~~~v~c~~W~p~S~~vl~c-~g~h~~IKpL~~n~k~i~WkAH  185 (737)
T KOG1524|consen  139 S------------------------------TV--VQNEESIRCARWAPNSNSIVFC-QGGHISIKPLAANSKIIRWRAH  185 (737)
T ss_pred             H------------------------------HH--hhcCceeEEEEECCCCCceEEe-cCCeEEEeecccccceeEEecc
Confidence            0                              00  012334444  44555554443 3456777666666677788899


Q ss_pred             cccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEE
Q psy9182         274 TGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR  351 (486)
Q Consensus       274 ~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~  351 (486)
                      .+-|.+++|  ..+.+++|+.|-..++||-. |..+..-..|..+|++++|+|+.++....-+.+++             
T Consensus       186 DGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~-------------  251 (737)
T KOG1524|consen  186 DGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARF-------------  251 (737)
T ss_pred             CcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccccceeeeeeeeeee-------------
Confidence            999999999  46899999999999999964 77888888899999999999885444333334441             


Q ss_pred             eeecCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182         352 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       352 ~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iw  382 (486)
                       .....+.|..++|  ||..++.|+..|.+.+=
T Consensus       252 -~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  252 -SSPRVGSIFNLSWSADGTQATCGTSTGQLIVA  283 (737)
T ss_pred             -cCCCccceEEEEEcCCCceeeccccCceEEEe
Confidence             2234567888888  89999999988877653

>KOG1523|consensus

Probab=99.46  E-value=1.4e-11  Score=105.07  Aligned_cols=224  Identities=14%  Similarity=0.210  Sum_probs=172.0

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCc---eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEEC-CCC--cE
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSL---QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDV-NTG--EM  306 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~-~~~--~~  306 (486)
                      ....++..|...+|++..+..|.||.....   +...+++.|...|+++.|  ..+.|++++.|..-++|.. ..+  ++
T Consensus        13 itchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~Wkp   92 (361)
T KOG1523|consen   13 ITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKP   92 (361)
T ss_pred             eeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeecc
Confidence            344555668889999999999999987654   466788899999999999  5678999999999999998 333  33


Q ss_pred             EEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCcee-eEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182         307 VNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEIT-LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV  381 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i  381 (486)
                      ...+..+....+++.|+|  +.+++|+....|.+|-++..+..- .......++..|++++|  ++-++++|+.|+..++
T Consensus        93 tlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rV  172 (361)
T KOG1523|consen   93 TLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRV  172 (361)
T ss_pred             ceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeE
Confidence            445567788999999986  499999999999999887765431 12334567889999999  6778999999999999


Q ss_pred             EECC-----C-------------ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe-eeEEecCcccCe
Q psy9182         382 WNTS-----S-------------CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELV  440 (486)
Q Consensus       382 wd~~-----~-------------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~h~~~v  440 (486)
                      +..-     .             |+++.++....+.+..+.|.  |+.|+-.+.|..|.+-|..... .+.......-+.
T Consensus       173 fSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~  252 (361)
T KOG1523|consen  173 FSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPL  252 (361)
T ss_pred             EEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCc
Confidence            8631     1             33444454556678777775  9999999999999999987654 344444444788


Q ss_pred             EEEEe-cCCEEEEEeCCCc
Q psy9182         441 RCIRF-DAKRIVSGAYDGK  458 (486)
Q Consensus       441 ~~~~~-~~~~l~s~~~dg~  458 (486)
                      .++.| ..+.++.++.|..
T Consensus       253 ls~~~ise~~vv~ag~~c~  271 (361)
T KOG1523|consen  253 LSVSWISENSVVAAGYDCG  271 (361)
T ss_pred             eeeEeecCCceeecCCCCC
Confidence            88888 6677777777643

>KOG2321|consensus

Probab=99.45  E-value=3.4e-11  Score=110.37  Aligned_cols=261  Identities=14%  Similarity=0.197  Sum_probs=172.6

Q ss_pred             cCcce-eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE
Q psy9182         171 RDEFQ-IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS  249 (486)
Q Consensus       171 ~~~~~-l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  249 (486)
                      +||.+ +++|...-.|++||+.+......                             .+.........-++-|-..++.
T Consensus        61 ~DGqY~lAtG~YKP~ikvydlanLSLKFE-----------------------------RhlDae~V~feiLsDD~SK~v~  111 (703)
T KOG2321|consen   61 PDGQYLLATGTYKPQIKVYDLANLSLKFE-----------------------------RHLDAEVVDFEILSDDYSKSVF  111 (703)
T ss_pred             CCCcEEEEecccCCceEEEEcccceeeee-----------------------------ecccccceeEEEeccchhhheE
Confidence            45555 56777788999999865432211                             1111222222333334444555


Q ss_pred             EecCCeEEEEECCCceeeE-EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--
Q psy9182         250 GLRDNTIKVWDRVSLQCIK-VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--  324 (486)
Q Consensus       250 ~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--  324 (486)
                      -..|.+|.+... .|.... .+. .  .-..+.+  -..-|+.++....|+-++++.|..+..+....+.+.++..++  
T Consensus       112 L~~DR~IefHak-~G~hy~~RIP-~--~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~h  187 (703)
T KOG2321|consen  112 LQNDRTIEFHAK-YGRHYRTRIP-K--FGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEH  187 (703)
T ss_pred             eecCceeeehhh-cCeeeeeecC-c--CCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCcc
Confidence            556666655432 122111 111 1  1123333  122344444556799999999999999988888888888875  


Q ss_pred             CeEEEEeCCCcEEEEECCCCCceeeEEee---ecC-----cccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         325 GMMVTCSKDRSIAVWDMVSPNEITLRRVL---VGH-----RAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       325 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~-----~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      +++++|+.+|.|.+||.+...........   ..|     ...|+++.|  +|-.+++|+.+|.+.|||+++.+++..-.
T Consensus       188 gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd  267 (703)
T KOG2321|consen  188 GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD  267 (703)
T ss_pred             ceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc
Confidence            58899999999999999887654332221   122     234999999  47889999999999999999988765433


Q ss_pred             -CCcccEEEEEeC----CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         395 -GHKRGIACLQYR----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       395 -~~~~~v~~~~~~----~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                       +...+|..+.|.    ++.++ ......++|||-.+|+....+... ..++.+++  ++.++++|..++.+..|=+..
T Consensus       268 h~~e~pi~~l~~~~~~~q~~v~-S~Dk~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  268 HGYELPIKKLDWQDTDQQNKVV-SMDKRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             cCCccceeeecccccCCCceEE-ecchHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEecCCCcceeEEccc
Confidence             333567777773    23444 445678999999999999888754 44888888  888899999999888877654

>KOG3881|consensus

Probab=99.45  E-value=2e-11  Score=106.87  Aligned_cols=219  Identities=14%  Similarity=0.240  Sum_probs=159.2

Q ss_pred             EEEEecCCeEEEEECCCceeeEEE------cCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCc----EEEEecccCcc
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVL------TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE----MVNTLIHHCEA  316 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~------~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~  316 (486)
                      +...+.+..+..+......+...+      ......|..+...+..|++|-.+|.+.+|..+.+.    .+..+.. ...
T Consensus        72 l~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~-g~g  150 (412)
T KOG3881|consen   72 LNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLAT-GPG  150 (412)
T ss_pred             eeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeec-CCc
Confidence            333335656666666555544332      33456677777766678888999999999988543    2222322 234


Q ss_pred             EEEEEEc---CCeEEEEeCC--CcEEEEECCCCCceeeEEeee------cCcccEEEEEe-C---CCEEEEEeCCCcEEE
Q psy9182         317 VLHLRFS---NGMMVTCSKD--RSIAVWDMVSPNEITLRRVLV------GHRAAVNVVDF-D---EKYIVSASGDRTIKV  381 (486)
Q Consensus       317 i~~~~~~---~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~------~~~~~v~~~~~-~---~~~l~~~~~d~~i~i  381 (486)
                      +..+.-.   +..+++|+..  ..+.+||+...+.+..-.-..      .-+..++.+.| .   ...|++++.-+.+++
T Consensus       151 ~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~  230 (412)
T KOG3881|consen  151 LYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRL  230 (412)
T ss_pred             eeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEE
Confidence            4455443   4578889998  899999998874332111111      11334556677 2   578999999999999


Q ss_pred             EECCCc-eEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEecCC--EEEEEeC
Q psy9182         382 WNTSSC-EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFDAK--RIVSGAY  455 (486)
Q Consensus       382 wd~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~--~l~s~~~  455 (486)
                      ||.+.+ +++..+.-...+++++..  +++.+++|..-|.+..||++.++.+.. +++-.+.|++|..+++  +|+++|-
T Consensus       231 YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GL  310 (412)
T KOG3881|consen  231 YDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGL  310 (412)
T ss_pred             ecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeecc
Confidence            999875 567888877777777665  699999999999999999999998877 8889999999999555  8999999


Q ss_pred             CCcEEEEeCCC
Q psy9182         456 DGKIKVWNLVA  466 (486)
Q Consensus       456 dg~v~iwdl~~  466 (486)
                      |..|||+|+.+
T Consensus       311 DRyvRIhD~kt  321 (412)
T KOG3881|consen  311 DRYVRIHDIKT  321 (412)
T ss_pred             ceeEEEeeccc
Confidence            99999999998

>KOG1409|consensus

Probab=99.43  E-value=1.6e-11  Score=105.60  Aligned_cols=245  Identities=16%  Similarity=0.310  Sum_probs=166.0

Q ss_pred             cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccc
Q psy9182         137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN  216 (486)
Q Consensus       137 ~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (486)
                      .+++.++||.+.|+....-               +...-+++.+.|.++++|--.+..+-                    
T Consensus        15 ~ll~~~eG~~d~vn~~~l~---------------~~e~gv~~~s~drtvrv~lkrds~q~--------------------   59 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILI---------------PKEEGVISVSEDRTVRVWLKRDSGQY--------------------   59 (404)
T ss_pred             hhhhhhcCchhhhhhheec---------------cCCCCeEEccccceeeeEEecccccc--------------------
Confidence            3456677887777655442               45556889999999999963221100                    


Q ss_pred             cccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC----CceeeEEEcCCcccEEEEEe--cCCEEEEE
Q psy9182         217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV----SLQCIKVLTGHTGSVLCLQY--DERVIISG  290 (486)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  290 (486)
                      |       ..+.........+.....+...|++|-.+|++.-+.+.    .....+....|...+..+-|  ....+++.
T Consensus        60 w-------psI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~  132 (404)
T KOG1409|consen   60 W-------PSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLST  132 (404)
T ss_pred             C-------chhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEe
Confidence            0       00111112333445555577889999999999988643    34556667789999999888  46789999


Q ss_pred             eCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--CC
Q psy9182         291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EK  368 (486)
Q Consensus       291 ~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~  368 (486)
                      +.|..+.---.+.+..+..+.... ...++.+.-.....|...|.|....+.... ..+...+.+|...+.++.|+  ..
T Consensus       133 ~~dk~~~~hc~e~~~~lg~Y~~~~-~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~-~~~i~~~~~h~~~~~~l~Wd~~~~  210 (404)
T KOG1409|consen  133 GKDKQFAWHCTESGNRLGGYNFET-PASALQFDALYAFVGDHSGQITMLKLEQNG-CQLITTFNGHTGEVTCLKWDPGQR  210 (404)
T ss_pred             ccccceEEEeeccCCcccceEeec-cCCCCceeeEEEEecccccceEEEEEeecC-CceEEEEcCcccceEEEEEcCCCc
Confidence            998877655556665544332211 111111111156667777777776665433 24556788999999999994  56


Q ss_pred             EEEEEeCCCcEEEEECCCceE-EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         369 YIVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      .+++|..|..+.+||+...+- ...+.+|...|..+..-  -+.+.+++.||.|.+|+++
T Consensus       211 ~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  211 LLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             EEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence            899999999999999876543 45677898888877763  6789999999999999986

>KOG1310|consensus

Probab=99.43  E-value=2e-12  Score=117.61  Aligned_cols=207  Identities=24%  Similarity=0.417  Sum_probs=146.4

Q ss_pred             eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCccEEEEEEcC----CeEEEEeCCCcEEE
Q psy9182         266 CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSN----GMMVTCSKDRSIAV  338 (486)
Q Consensus       266 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~----~~l~~~~~dg~i~i  338 (486)
                      ..+.+.||.+.|.|+.|  +|.+|++|+.|-.+.|||.-..++++.+ .+|...|.++.|-|    ..+++|..|..|++
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l  121 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL  121 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence            34578899999999999  8999999999999999999988888877 67899999999964    38999999999999


Q ss_pred             EECCCCCc-------eeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEE-E---------EcCCcc
Q psy9182         339 WDMVSPNE-------ITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVR-T---------LNGHKR  398 (486)
Q Consensus       339 ~d~~~~~~-------~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~-~---------~~~~~~  398 (486)
                      +|+...+.       .........|...|..++.   ..+.+.+++.||+|+-+|++...... .         +...--
T Consensus       122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li  201 (758)
T KOG1310|consen  122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI  201 (758)
T ss_pred             EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence            99985221       1122334556677766666   34789999999999999998632111 1         111112


Q ss_pred             cEEEEEeC---CCEEEEEeCCCcEEEEECCC--------Ce----------eeEEe-cCcc--------cC---eEEEEe
Q psy9182         399 GIACLQYR---DRLVVSGSSDNTIRLWDIEC--------GA----------CLRVL-EGHE--------EL---VRCIRF  445 (486)
Q Consensus       399 ~v~~~~~~---~~~l~~~~~dg~v~iwd~~~--------~~----------~~~~~-~~h~--------~~---v~~~~~  445 (486)
                      ...|+..+   ..+|++|+.|-..++||.+.        +.          ++..+ .+|.        ..   ++-+.|
T Consensus       202 elk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtf  281 (758)
T KOG1310|consen  202 ELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTF  281 (758)
T ss_pred             eeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEE
Confidence            33455553   68999999999999999431        11          22222 1222        12   345566


Q ss_pred             --cCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182         446 --DAKRIVSGAYDGKIKVWNLVAALDPRA  472 (486)
Q Consensus       446 --~~~~l~s~~~dg~v~iwdl~~~~~~~~  472 (486)
                        +|.-|+..-....|+++|+..++.+..
T Consensus       282 npNGtElLvs~~gEhVYlfdvn~~~~~~~  310 (758)
T KOG1310|consen  282 NPNGTELLVSWGGEHVYLFDVNEDKSPTP  310 (758)
T ss_pred             CCCCcEEEEeeCCeEEEEEeecCCCCcee
Confidence              454555554456799999998876544

>KOG2394|consensus

Probab=99.42  E-value=4.5e-12  Score=115.12  Aligned_cols=196  Identities=14%  Similarity=0.208  Sum_probs=132.7

Q ss_pred             CccCcceEEEeecCceeeecccccccceeeec----CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCccee
Q psy9182         112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN----GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILI  187 (486)
Q Consensus       112 ~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~----~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~v  187 (486)
                      -.+++--++.|-..|.|.+.|....+..+.+.    -.+..|+|+.|-+              -+...++.+-.+|.+.+
T Consensus       181 a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvp--------------g~~~~Fl~a~~sGnlyl  246 (636)
T KOG2394|consen  181 ATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVP--------------GSDSLFLVAHASGNLYL  246 (636)
T ss_pred             cCCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEe--------------CCCceEEEEEecCceEE
Confidence            34567778888889999999887643332222    1346889999953              24455666777888888


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCc--eeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGK--FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ  265 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  265 (486)
                      +|.........+....  ......-....|....  ..+.+... ......-.|+++||++||+.+.||.++|||..+.+
T Consensus       247 y~~~~~~~~t~p~~~~--~k~~~~f~i~t~ksk~~rNPv~~w~~-~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~e  323 (636)
T KOG2394|consen  247 YDKEIVCGATAPSYQA--LKDGDQFAILTSKSKKTRNPVARWHI-GEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQE  323 (636)
T ss_pred             eeccccccCCCCcccc--cCCCCeeEEeeeeccccCCccceeEe-ccccccceeEcCCCceEEEEecCceEEEeeccHHH
Confidence            8762211111000000  0000000000000000  00011111 11234456788899999999999999999999999


Q ss_pred             eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182         266 CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       266 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~  324 (486)
                      .+..++..-+...|++|  ||++|++|+.|..|.||.+..++.+..-++|...|..++|++
T Consensus       324 Llg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  324 LLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             HHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            88888877888999999  999999999999999999999999999999999999999997

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.41  E-value=8.7e-10  Score=97.75  Aligned_cols=214  Identities=12%  Similarity=0.061  Sum_probs=151.3

Q ss_pred             CCeEEEEECCCceeeEEEcCC--cccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEE
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGH--TGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVT  329 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~  329 (486)
                      +|.|..||..+|+.+......  .....+... ++..+++++.++.|..||..+|+.+................++.+++
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v   81 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYV   81 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeeccccccc
Confidence            689999999999999887641  122232233 78888888999999999999999988876533222224566788888


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeee--cC-cccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc-------
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLV--GH-RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-------  399 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~--~~-~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------  399 (486)
                      ++.++.++.+|..+++..-......  .. ........+.+..++++..++.|..+|+++|+.+.........       
T Consensus        82 ~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~  161 (238)
T PF13360_consen   82 GTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISS  161 (238)
T ss_dssp             EETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEE
T ss_pred             ccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceee
Confidence            8899999999999998764321111  11 1122344446888999998999999999999998888764422       


Q ss_pred             ----EEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEE-EEecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         400 ----IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC-IRFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       400 ----v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~-~~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                          ...+...+..+..++.++.+.-+|+.+++.+....  ...+.. ...++..|+.++.++.|..||+.++.
T Consensus       162 ~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  162 FSDINGSPVISDGRVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGK  233 (238)
T ss_dssp             ETTEEEEEECCTTEEEEECCTSSEEEEETTTTEEEEEEC--SS-ECECEECCCTEEEEEETTTEEEEEETTTTE
T ss_pred             ecccccceEEECCEEEEEcCCCeEEEEECCCCCEEEEec--CCCccCCceeeCCEEEEEeCCCEEEEEECCCCC
Confidence                13333444578888888864444999999775444  233444 55588898888899999999999764

...

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.39  E-value=6.6e-11  Score=113.91  Aligned_cols=205  Identities=16%  Similarity=0.161  Sum_probs=130.8

Q ss_pred             eEEEEeCCCEEEEEecC---CeEEEEECCCcee--eEEEcCCcccEEEEEecCCEEEEEe-CCCcEEE--EECCCCcEEE
Q psy9182         237 VYCLQYDDHKIVSGLRD---NTIKVWDRVSLQC--IKVLTGHTGSVLCLQYDERVIISGS-SDSTVRV--WDVNTGEMVN  308 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~v--wd~~~~~~~~  308 (486)
                      ..+++|+|+.++..+.+   ..|++||+.+++.  +..+.++... .+++.||+.|+.++ .+|.+.+  ||+.+++. .
T Consensus       208 ~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~-~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~  285 (429)
T PRK01742        208 SPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGA-PAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-S  285 (429)
T ss_pred             cceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCc-eeECCCCCEEEEEEecCCcEEEEEEECCCCCe-E
Confidence            34567788887776543   3699999988754  3334444332 23344888887764 5776555  56666654 4


Q ss_pred             EecccCccEEEEEEcCC--eEE-EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECC
Q psy9182         309 TLIHHCEAVLHLRFSNG--MMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~~--~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~  385 (486)
                      .+..+...+....|+++  .++ ++..+|...+|++.......  ... .+......++.+|++++..+.++ +.+||+.
T Consensus       286 ~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~--~~l-~~~~~~~~~SpDG~~ia~~~~~~-i~~~Dl~  361 (429)
T PRK01742        286 QLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA--SLV-GGRGYSAQISADGKTLVMINGDN-VVKQDLT  361 (429)
T ss_pred             eeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe--EEe-cCCCCCccCCCCCCEEEEEcCCC-EEEEECC
Confidence            45555666778888875  444 44467888888875432211  111 22222223444899998887754 6669999


Q ss_pred             CceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEEC--CCCeeeEEecCcccCeEEEEecC
Q psy9182         386 SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI--ECGACLRVLEGHEELVRCIRFDA  447 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~--~~~~~~~~~~~h~~~v~~~~~~~  447 (486)
                      +++.......+...-..+++++++|+.++.++.+.+|++  .+|+.+..+..|.+.+...+|.+
T Consensus       362 ~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp  425 (429)
T PRK01742        362 SGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSP  425 (429)
T ss_pred             CCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCC
Confidence            887543333322222345667999999999998888875  35888888988888888888743

>KOG0974|consensus

Probab=99.37  E-value=4.2e-11  Score=117.32  Aligned_cols=186  Identities=23%  Similarity=0.326  Sum_probs=149.2

Q ss_pred             EEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEE-EEE---EcCC--eEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         279 CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL-HLR---FSNG--MMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       279 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~-~~~---~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                      .+.++...++.++.+..+.+||...+.....+........ ++.   .+++  ++++|+.-+.|.+|+....+..   ..
T Consensus        94 ~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p---~~  170 (967)
T KOG0974|consen   94 KLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKP---IR  170 (967)
T ss_pred             chhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCc---ce
Confidence            3445778888899999999999988877766654332221 111   1233  8899999999999998843322   25


Q ss_pred             eecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE-EEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCee
Q psy9182         353 LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       353 ~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      +.+|.+.+.++.+  ||+++++.+.|.++++|++++.+... ..-+|...+..+.+.++.+++++.|.+.++|+.+ ++.
T Consensus       171 l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~~-~~~  249 (967)
T KOG0974|consen  171 LKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDCTCRVWGVN-GTQ  249 (967)
T ss_pred             ecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccceeEEeccceEEEEEecc-cce
Confidence            7799999999999  99999999999999999999988776 6668999999999988899999999999999765 777


Q ss_pred             eEEecCccc-CeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         430 LRVLEGHEE-LVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       430 ~~~~~~h~~-~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +..+.+|.. .|..++.  +...++|++.||.+++||+....
T Consensus       250 l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r~  291 (967)
T KOG0974|consen  250 LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGRG  291 (967)
T ss_pred             ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhccc
Confidence            778888854 6888888  55568999999999999987643

>KOG4497|consensus

Probab=99.34  E-value=3.8e-11  Score=102.70  Aligned_cols=318  Identities=14%  Similarity=0.189  Sum_probs=191.1

Q ss_pred             cCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeee
Q psy9182         110 LLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWD  189 (486)
Q Consensus       110 ~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd  189 (486)
                      +.|||+|+++|+++.- .+.|-|..+-+..+.+.- -..|..+.|.-              .....+.....|+.|.+|+
T Consensus        14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~a--------------ds~~ilC~~yk~~~vqvws   77 (447)
T KOG4497|consen   14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKA--------------DSCHILCVAYKDPKVQVWS   77 (447)
T ss_pred             eeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeec--------------cceeeeeeeeccceEEEEE
Confidence            4679999999999876 888899888776554432 22455555541              1122355667788999999


Q ss_pred             cccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE-EEEEecCCeEEEEECCCceeeE
Q psy9182         190 FLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK-IVSGLRDNTIKVWDRVSLQCIK  268 (486)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~  268 (486)
                      +...+-......+                             ..+....+++|+|+. |.+..-+-.|.+|.+.+.+...
T Consensus        78 l~Qpew~ckIdeg-----------------------------~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~  128 (447)
T KOG4497|consen   78 LVQPEWYCKIDEG-----------------------------QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL  128 (447)
T ss_pred             eecceeEEEeccC-----------------------------CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE
Confidence            8664432222111                             233445678999955 5566678899999998876553


Q ss_pred             EEc-CCcccEEEEEecCCEEEEEeCCCc---EEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCC
Q psy9182         269 VLT-GHTGSVLCLQYDERVIISGSSDST---VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP  344 (486)
Q Consensus       269 ~~~-~~~~~v~~~~~~~~~l~~~~~dg~---i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~  344 (486)
                      .-. .|.....++..||++.+.++.-..   +.+..-.....++.+...+-..+.+.|+|+       +..+.+||.--.
T Consensus       129 ~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPd-------g~~laVwd~~Le  201 (447)
T KOG4497|consen  129 LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPD-------GNWLAVWDNVLE  201 (447)
T ss_pred             ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCC-------CcEEEEecchhh
Confidence            321 233333344448888888765422   222222223445555555666778888875       233455664322


Q ss_pred             CceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE-----------------------------
Q psy9182         345 NEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL-----------------------------  393 (486)
Q Consensus       345 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----------------------------  393 (486)
                      -.+.    .-.....+..++|  .++++++|+.|+.+++.|--+.+....+                             
T Consensus       202 ykv~----aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cL  277 (447)
T KOG4497|consen  202 YKVY----AYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCL  277 (447)
T ss_pred             heee----eeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhccccc
Confidence            1111    1111244556666  5899999999999998763222211110                             


Q ss_pred             -------------------------------c------CCcccEEEEEeC--CCEEEEEeC--CCcEEEEECCCCeeeEE
Q psy9182         394 -------------------------------N------GHKRGIACLQYR--DRLVVSGSS--DNTIRLWDIECGACLRV  432 (486)
Q Consensus       394 -------------------------------~------~~~~~v~~~~~~--~~~l~~~~~--dg~v~iwd~~~~~~~~~  432 (486)
                                                     +      ...-++..++|+  ..++++-.+  -+.+-+||++..+....
T Consensus       278 sf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~av  357 (447)
T KOG4497|consen  278 SFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAV  357 (447)
T ss_pred             ccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhh
Confidence                                           0      001122344453  455555443  25699999997665554


Q ss_pred             ecCcccCeEEEEecCC--EEEEEeCCCcEEEEeCCCCCCCCCCccccceeeeee
Q psy9182         433 LEGHEELVRCIRFDAK--RIVSGAYDGKIKVWNLVAALDPRAPTTTLCLRTLVV  484 (486)
Q Consensus       433 ~~~h~~~v~~~~~~~~--~l~s~~~dg~v~iwdl~~~~~~~~~~~~~~~~~~~~  484 (486)
                      +. ...+|....||+.  +|+.+.....+++|......-...|..+..++.+..
T Consensus       358 Li-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i~~l~W  410 (447)
T KOG4497|consen  358 LI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNIQKLQW  410 (447)
T ss_pred             hh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCceeeeEEe
Confidence            43 4568999999654  466666667799999988776666777766666543

>KOG1009|consensus

Probab=99.34  E-value=2.4e-11  Score=106.80  Aligned_cols=154  Identities=21%  Similarity=0.468  Sum_probs=126.8

Q ss_pred             ccEEEEEe---cCCEEEEEeCCCcEEEEECCCCc---------EEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEE
Q psy9182         275 GSVLCLQY---DERVIISGSSDSTVRVWDVNTGE---------MVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD  340 (486)
Q Consensus       275 ~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d  340 (486)
                      .++..+.+   +.+.+++|+.|..|++|-+..++         ....+..|...|.++.|+++  .+++|+.+|.|.+|.
T Consensus        14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk   93 (434)
T KOG1009|consen   14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWK   93 (434)
T ss_pred             CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEE
Confidence            46677777   23488999999999999876432         23345778899999999875  999999999999997


Q ss_pred             CC--------C-----CCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         341 MV--------S-----PNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       341 ~~--------~-----~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      ..        +     .+.........+|...+..++|  +++++++++.|..+++||+..|+....+..|..-+..++|
T Consensus        94 ~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvaw  173 (434)
T KOG1009|consen   94 QGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAW  173 (434)
T ss_pred             ecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeec
Confidence            65        2     2334455677889999999999  8999999999999999999999999999999999999999


Q ss_pred             C--CCEEEEEeCCCcEEEEECCCCe
Q psy9182         406 R--DRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       406 ~--~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      +  ++++++-+.|...+++++...+
T Consensus       174 Dpl~qyv~s~s~dr~~~~~~~~~~~  198 (434)
T KOG1009|consen  174 DPLNQYVASKSSDRHPEGFSAKLKQ  198 (434)
T ss_pred             chhhhhhhhhccCcccceeeeeeee
Confidence            7  7899999999888888776443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.30  E-value=7.5e-10  Score=106.63  Aligned_cols=203  Identities=16%  Similarity=0.126  Sum_probs=128.2

Q ss_pred             CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC---CcEEEEECCCCcEEEEecccCccEEEEEEcCC--
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD---STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--  325 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--  325 (486)
                      +..|.+||..... .+.+..|...+.+..|  ||+.|+.++.+   ..|++||+.+++.... .........+.|+|+  
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wSPDG~  260 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFSPDGS  260 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeECCCCC
Confidence            4689999986554 4556667777887777  88888887654   3699999988764322 111222345788765  


Q ss_pred             eEEEE-eCCCcEEEE--ECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCc-eEEEEEcCCcc
Q psy9182         326 MMVTC-SKDRSIAVW--DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSC-EFVRTLNGHKR  398 (486)
Q Consensus       326 ~l~~~-~~dg~i~i~--d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~-~~~~~~~~~~~  398 (486)
                      .++.+ ..+|.+.+|  |+.++..    ..+..+...+....|  ||+.++.++ .++...+|++... .....+ .+..
T Consensus       261 ~La~~~~~~g~~~Iy~~d~~~~~~----~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~  335 (429)
T PRK01742        261 RLAFASSKDGVLNIYVMGANGGTP----SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG  335 (429)
T ss_pred             EEEEEEecCCcEEEEEEECCCCCe----EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC
Confidence            56655 467766555  6555442    223344445555666  888766554 5678888876432 222223 3332


Q ss_pred             cEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         399 GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       399 ~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ....++.+|+.|+.++.++ +.+||+.+++.......+.  ..++.|  ||++|+.++.+|.+.+|++.
T Consensus       336 ~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~--~~~~~~sPdG~~i~~~s~~g~~~~l~~~  401 (429)
T PRK01742        336 YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTFL--DESPSISPNGIMIIYSSTQGLGKVLQLV  401 (429)
T ss_pred             CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCCC--CCCceECCCCCEEEEEEcCCCceEEEEE
Confidence            2223455788888887765 5669999887653333322  234556  99999999999998888864

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.30  E-value=2.2e-09  Score=102.45  Aligned_cols=224  Identities=9%  Similarity=0.013  Sum_probs=151.9

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE-----
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV-----  317 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i-----  317 (486)
                      ++..++.++.+|.+..+|..+|+.+...+.......+....+..++.+..+|.+..+|.++|+.+..........     
T Consensus       119 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~  198 (394)
T PRK11138        119 AGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGE  198 (394)
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCC
Confidence            567788888999999999999999887764432222222345677778889999999999999988775432111     


Q ss_pred             EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCc-c------cE-EEEEeCCCEEEEEeCCCcEEEEECCCceE
Q psy9182         318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR-A------AV-NVVDFDEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~------~v-~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ......++.++.++.+|.+..+|..+++..-......... .      .+ ..-...+..++.++.+|.+..+|..+|+.
T Consensus       199 ~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~  278 (394)
T PRK11138        199 SAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQI  278 (394)
T ss_pred             CCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCE
Confidence            1122235678888899999999998887543221111000 0      00 11112456777788899999999999987


Q ss_pred             EEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc-cCeEEEEecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         390 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       390 ~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +......  ....+...+..++.++.+|.+..+|..+|+.+.....-. ....+....+.+|+.++.||.|.+.|..++.
T Consensus       279 ~W~~~~~--~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~  356 (394)
T PRK11138        279 VWKREYG--SVNDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDGR  356 (394)
T ss_pred             EEeecCC--CccCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCCCC
Confidence            7655421  122344567788888899999999999998876543211 1223334457788889999999999988764

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.29  E-value=5.3e-09  Score=92.69  Aligned_cols=190  Identities=12%  Similarity=0.077  Sum_probs=132.2

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEe-ccc-----C
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL-IHH-----C  314 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~-----~  314 (486)
                      ..+++.+++++.++.|..||..+|+.+..+............++..+++++.++.++.+|..+|+.+... ...     .
T Consensus        33 ~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~  112 (238)
T PF13360_consen   33 VPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV  112 (238)
T ss_dssp             EEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred             EEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccceeeecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence            3477888888999999999999999988877522211223446777788888899999999999998884 322     1


Q ss_pred             ccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCc-cc-------EEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR-AA-------VNVVDFDEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-~~-------v~~~~~~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      .......+.++.++++..++.|..+|+++++.+.......... ..       ...+.+.+..++.++.++.+..+|+.+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~t  192 (238)
T PF13360_consen  113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSGDGRVVAVDLAT  192 (238)
T ss_dssp             B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECCTSSEEEEETTT
T ss_pred             ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcCCCeEEEEECCC
Confidence            1223455558899999999999999999997654333211110 11       123333444888888888644449999


Q ss_pred             ceEEEEEcCCcccEEE-EEeCCCEEEEEeCCCcEEEEECCCCeeeEE
Q psy9182         387 CEFVRTLNGHKRGIAC-LQYRDRLVVSGSSDNTIRLWDIECGACLRV  432 (486)
Q Consensus       387 ~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~  432 (486)
                      ++.+....  ...... ...++..|+.++.++.|..||+++|+.+..
T Consensus       193 g~~~w~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  193 GEKLWSKP--ISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             TEEEEEEC--SS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             CCEEEEec--CCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence            99765333  333333 566788888888999999999999998754

...

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.28  E-value=4.9e-09  Score=97.73  Aligned_cols=259  Identities=16%  Similarity=0.155  Sum_probs=160.4

Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                      +++-..++.|.+.|..+.+                            .+..+.... .......+++|++++++.+.||.
T Consensus         9 ~V~~~~~~~v~viD~~t~~----------------------------~~~~i~~~~-~~h~~~~~s~Dgr~~yv~~rdg~   59 (369)
T PF02239_consen    9 YVVERGSGSVAVIDGATNK----------------------------VVARIPTGG-APHAGLKFSPDGRYLYVANRDGT   59 (369)
T ss_dssp             EEEEGGGTEEEEEETTT-S----------------------------EEEEEE-ST-TEEEEEE-TT-SSEEEEEETTSE
T ss_pred             EEEecCCCEEEEEECCCCe----------------------------EEEEEcCCC-CceeEEEecCCCCEEEEEcCCCe
Confidence            4555667888899865433                            222333221 22334567889999999999999


Q ss_pred             EEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCcEEEEeccc-------CccEEEEEEcCC
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGEMVNTLIHH-------CEAVLHLRFSNG  325 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~-------~~~i~~~~~~~~  325 (486)
                      |.++|+.+++.+.+++.... ..++++  ||++++++. .++.+.++|.++.+.++.+...       ...+..+..++.
T Consensus        60 vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~  138 (369)
T PF02239_consen   60 VSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPG  138 (369)
T ss_dssp             EEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SS
T ss_pred             EEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCC
Confidence            99999999999998875443 344444  899988775 5799999999999998887532       335566655432


Q ss_pred             --eEE-EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCCceEEEEEc----C
Q psy9182         326 --MMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSSCEFVRTLN----G  395 (486)
Q Consensus       326 --~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~----~  395 (486)
                        .++ ..-..+.|.+.|....+........  .........+  ++++++++ ..++.|-++|..+++.+..+.    .
T Consensus       139 ~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~--~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p  216 (369)
T PF02239_consen  139 RPEFVVNLKDTGEIWVVDYSDPKNLKVTTIK--VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKP  216 (369)
T ss_dssp             SSEEEEEETTTTEEEEEETTTSSCEEEEEEE----TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSB
T ss_pred             CCEEEEEEccCCeEEEEEeccccccceeeec--ccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccc
Confidence              344 4445588988898776544322221  2223334444  77877664 567789999999998877664    2


Q ss_pred             CcccEEEEEe-----------CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEE----eCCCc
Q psy9182         396 HKRGIACLQY-----------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG----AYDGK  458 (486)
Q Consensus       396 ~~~~v~~~~~-----------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~----~~dg~  458 (486)
                      |......+..           .+...++.-....+.+||..+.+.++.+.....+ ..+.-  +++++.+.    ...++
T Consensus       217 ~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~  295 (369)
T PF02239_consen  217 HPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADT  295 (369)
T ss_dssp             EETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-
T ss_pred             cccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCce
Confidence            3333433321           2333323333446778999999999999887766 44443  88898887    45589


Q ss_pred             EEEEeCCCC
Q psy9182         459 IKVWNLVAA  467 (486)
Q Consensus       459 v~iwdl~~~  467 (486)
                      |.++|.++-
T Consensus       296 v~viD~~tl  304 (369)
T PF02239_consen  296 VQVIDKKTL  304 (369)
T ss_dssp             EEEEECCGT
T ss_pred             EEEEECcCc
Confidence            999999875

...

>KOG1912|consensus

Probab=99.28  E-value=2.7e-09  Score=101.63  Aligned_cols=329  Identities=15%  Similarity=0.176  Sum_probs=195.6

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecc----eeEecCCCCceeccCcceeec
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR----LVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~----~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      +.....++.++|.| +||-|+.. .|.+-|..+-+.++++..|+..|+.+.|.+.    -+.+.+       ...-.+++
T Consensus        14 ~~sN~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~-------~~~lliAs   84 (1062)
T KOG1912|consen   14 SRSNRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPS-------SSQLLIAS   84 (1062)
T ss_pred             CcccccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCcc-------ccceeEEe
Confidence            34445667788777 77777664 8889999999999999999999999999642    222111       12235788


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---CC-CEEEEEecCC
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY---DD-HKIVSGLRDN  254 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~-~~l~~~~~dg  254 (486)
                      +...|.|.+||+............                             ..+..-+|+-+   +. ..|++-....
T Consensus        85 aD~~GrIil~d~~~~s~~~~l~~~-----------------------------~~~~qdl~W~~~rd~Srd~LlaIh~ss  135 (1062)
T KOG1912|consen   85 ADISGRIILVDFVLASVINWLSHS-----------------------------NDSVQDLCWVPARDDSRDVLLAIHGSS  135 (1062)
T ss_pred             ccccCcEEEEEehhhhhhhhhcCC-----------------------------CcchhheeeeeccCcchheeEEecCCc
Confidence            888999999998554332211111                             11222233333   22 4566666777


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCC-------CcEE-----------------
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNT-------GEMV-----------------  307 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~-------~~~~-----------------  307 (486)
                      .+.+||..+|+.............|+.+   |.+.+..-+..|.+.+-+.-.       ++..                 
T Consensus       136 ~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~a  215 (1062)
T KOG1912|consen  136 TLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETA  215 (1062)
T ss_pred             EEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhh
Confidence            8999999999888777665566667776   456666666666666654320       1111                 


Q ss_pred             --------------------------------------------------EEecccCccEEEEEEc----CCeEEEEeCC
Q psy9182         308 --------------------------------------------------NTLIHHCEAVLHLRFS----NGMMVTCSKD  333 (486)
Q Consensus       308 --------------------------------------------------~~~~~~~~~i~~~~~~----~~~l~~~~~d  333 (486)
                                                                        ....-..+.+..+.+-    .+.+++...|
T Consensus       216 t~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~n  295 (1062)
T KOG1912|consen  216 TGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSN  295 (1062)
T ss_pred             ccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecC
Confidence                                                              1100011111112221    1367788888


Q ss_pred             CcEEEEECCCCCceeeE---EeeecCcccEEEEEe--------------CCCEEEEEeCCCcEEEEECCCceEEEE----
Q psy9182         334 RSIAVWDMVSPNEITLR---RVLVGHRAAVNVVDF--------------DEKYIVSASGDRTIKVWNTSSCEFVRT----  392 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~---~~~~~~~~~v~~~~~--------------~~~~l~~~~~d~~i~iwd~~~~~~~~~----  392 (486)
                      |.+.+|--+........   .........+.++..              +...++.--.+|.+.+|.+.+++.-..    
T Consensus       296 G~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~  375 (1062)
T KOG1912|consen  296 GRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSS  375 (1062)
T ss_pred             CeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccc
Confidence            88888865431111000   000011112222222              233333334567777887765431100    


Q ss_pred             ------------------------E---cCCcccEEEEEeC-------------C-------CEEEEEeCCCcEEEEECC
Q psy9182         393 ------------------------L---NGHKRGIACLQYR-------------D-------RLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       393 ------------------------~---~~~~~~v~~~~~~-------------~-------~~l~~~~~dg~v~iwd~~  425 (486)
                                              +   .+|..+.++...+             +       .++|.|...|+|.++|+.
T Consensus       376 ~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvs  455 (1062)
T KOG1912|consen  376 SIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVS  455 (1062)
T ss_pred             cccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEec
Confidence                                    0   1344444443321             1       368999999999999999


Q ss_pred             CCeeeEEecCcccCeEEEEecCC-EEEEEeC----------CCcEEEEeCCCCCC
Q psy9182         426 CGACLRVLEGHEELVRCIRFDAK-RIVSGAY----------DGKIKVWNLVAALD  469 (486)
Q Consensus       426 ~~~~~~~~~~h~~~v~~~~~~~~-~l~s~~~----------dg~v~iwdl~~~~~  469 (486)
                      ++.....+..|...|.++.|-|+ .|++.+.          -+.+.+=|++++..
T Consensus       456 t~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGls  510 (1062)
T KOG1912|consen  456 TNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLS  510 (1062)
T ss_pred             chhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccc
Confidence            99999999999999999999544 4665543          24577889998864

>KOG1064|consensus

Probab=99.27  E-value=9.2e-11  Score=120.76  Aligned_cols=213  Identities=17%  Similarity=0.339  Sum_probs=161.6

Q ss_pred             cceEEE--EeCCCEEEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         235 KGVYCL--QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       235 ~~v~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      ..+.++  +|...+.++|+.||.+++|....++.+..++. ....|+.+.|  .|+.+..+..||.+.+|.+. .++...
T Consensus      2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s 2287 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTS 2287 (2439)
T ss_pred             CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccceec
Confidence            344444  34567899999999999999988888777652 2366777777  78899999999999999987 667777


Q ss_pred             ecccCccEEEEEEcCCeEEEEe---CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         310 LIHHCEAVLHLRFSNGMMVTCS---KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      .+.|.....++.|-...+++++   .++.+.+||...........  ..|...++++.+  ..+.+++|+.+|.|++||+
T Consensus      2288 ~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~ 2365 (2439)
T KOG1064|consen 2288 WQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDI 2365 (2439)
T ss_pred             cccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeeh
Confidence            7888888889998877777654   57899999987655444334  678888888877  7789999999999999999


Q ss_pred             CCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC-c--cc--CeEEEE--e-cCCEEEEEeCC
Q psy9182         385 SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG-H--EE--LVRCIR--F-DAKRIVSGAYD  456 (486)
Q Consensus       385 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h--~~--~v~~~~--~-~~~~l~s~~~d  456 (486)
                      +..++.+.++.       +. ...++++|+..|.++||++..-..+..+.. |  .+  ....+.  . -.++|.+++.|
T Consensus      2366 rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nrifsCgad 2437 (2439)
T KOG1064|consen 2366 RQRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRIFSCGAD 2437 (2439)
T ss_pred             HHHHHHHHhhh-------hh-hhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeeeccCceEEEecCC
Confidence            98888777765       22 367899999999999999987766666542 1  11  011111  1 45678888888


Q ss_pred             Cc
Q psy9182         457 GK  458 (486)
Q Consensus       457 g~  458 (486)
                      |+
T Consensus      2438 ~~ 2439 (2439)
T KOG1064|consen 2438 GT 2439 (2439)
T ss_pred             CC
Confidence            74

>KOG4547|consensus

Probab=99.25  E-value=4.6e-10  Score=103.74  Aligned_cols=208  Identities=18%  Similarity=0.218  Sum_probs=144.5

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCc-EEEEecccCccEEEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE-MVNTLIHHCEAVLHLR  321 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~  321 (486)
                      ...++|....||.+++||...++....+....              ..+..++-..|.+.-+. +.+...  .......+
T Consensus         4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~--------------~~s~t~~~~~w~L~~~~s~~k~~~--~~~~~~~s   67 (541)
T KOG4547|consen    4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA--------------SLSGTCTYTKWGLSADYSPMKWLS--LEKAKKAS   67 (541)
T ss_pred             hhheEeecCCCCeEEEEEccCceeeeeeccch--------------hccCcceeEEEEEEeccchHHHHh--HHHHhhcc
Confidence            34677888888888888888887766654211              01111222223211110 000000  00111111


Q ss_pred             EcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc
Q psy9182         322 FSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG  399 (486)
Q Consensus       322 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  399 (486)
                      .....++.|...|.|.+|+...++.. .......|.+.|.++.+  +-..|.+++.|+.+..|+...++.+..++.....
T Consensus        68 ~~t~~lvlgt~~g~v~~ys~~~g~it-~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~  146 (541)
T KOG4547|consen   68 LDTSMLVLGTPQGSVLLYSVAGGEIT-AKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL  146 (541)
T ss_pred             CCceEEEeecCCccEEEEEecCCeEE-EEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc
Confidence            12237888999999999999887643 33334678999999988  4568999999999999999999999999988877


Q ss_pred             EEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--c-----CCEE-EEEeCCCcEEEEeCCCCCC
Q psy9182         400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--D-----AKRI-VSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       400 v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~-----~~~l-~s~~~dg~v~iwdl~~~~~  469 (486)
                      +..+.+  ++..+++++  +.|++||+++++.+..|.+|.++|++++|  +     |.++ .++..+..+.+|-++...+
T Consensus       147 ~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~k  224 (541)
T KOG4547|consen  147 VSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDK  224 (541)
T ss_pred             cceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccc
Confidence            766665  567888876  68999999999999999999999999999  3     4554 4455666788998887543

>KOG4497|consensus

Probab=99.24  E-value=9.3e-10  Score=94.41  Aligned_cols=294  Identities=15%  Similarity=0.245  Sum_probs=168.1

Q ss_pred             cCCccCcceEEE-eecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCc-ceeecCCCCCccee
Q psy9182         110 LLPNFDEKYIVS-ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE-FQIVSSSHDDTILI  187 (486)
Q Consensus       110 ~~~s~~~~~l~t-g~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~-~~l~s~s~dg~i~v  187 (486)
                      +.+..|..++++ ...|+.|.+|++..-+-...+.....++..++|+               ||+ ..|.+...|-+|.+
T Consensus        54 ieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WS---------------PdgrhiL~tseF~lriTV  118 (447)
T KOG4497|consen   54 IEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWS---------------PDGRHILLTSEFDLRITV  118 (447)
T ss_pred             eeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeEC---------------CCcceEeeeecceeEEEE
Confidence            344456666665 4678899999999888888888888899999998               566 45667778999999


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC--------------
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD--------------  253 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------------  253 (486)
                      |.+.+......+.                              ..+....++++++|++.+..+.-              
T Consensus       119 WSL~t~~~~~~~~------------------------------pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W  168 (447)
T KOG4497|consen  119 WSLNTQKGYLLPH------------------------------PKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAW  168 (447)
T ss_pred             EEeccceeEEecc------------------------------cccCceeEEECCCCceeeeeecccHHHHHHHHhhHHH
Confidence            9987654322211                              12233455666676666555432              


Q ss_pred             ----------------------CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         254 ----------------------NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       254 ----------------------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                                            +.+.+||..-.-.+..+. ..-.+..++|  .++++++|+.|+.+++.+--+.++..+
T Consensus       169 ~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~e  247 (447)
T KOG4497|consen  169 ILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGE  247 (447)
T ss_pred             HHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhh
Confidence                                  223333321111111111 1123444444  356666666666666666555555544


Q ss_pred             ecccCccEE--------------------EEEEcCCeEEEEeCCCcEEEEECC-------C-CCceeeE---EeeecCcc
Q psy9182         310 LIHHCEAVL--------------------HLRFSNGMMVTCSKDRSIAVWDMV-------S-PNEITLR---RVLVGHRA  358 (486)
Q Consensus       310 ~~~~~~~i~--------------------~~~~~~~~l~~~~~dg~i~i~d~~-------~-~~~~~~~---~~~~~~~~  358 (486)
                      +.. ...+.                    ++.|.|.       |-...+|...       . .......   ........
T Consensus       248 flh-l~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~-------~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~  319 (447)
T KOG4497|consen  248 FLH-LCSYHDPTLHLLEKETFSIVQLLHHCLSFTPT-------DLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKC  319 (447)
T ss_pred             hcc-chhccCchhhhhhhhhcchhhhcccccccCCC-------ccccCccccchhhhhhhhcceeeecccCCCCCCCccc
Confidence            433 11111                    1111111       1111112111       0 0000000   00111233


Q ss_pred             cEEEEEe--CCCEEEEEeC--CCcEEEEECCCceEEEEEcCCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCCeeeEE
Q psy9182         359 AVNVVDF--DEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRV  432 (486)
Q Consensus       359 ~v~~~~~--~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~  432 (486)
                      .+.-++|  |..++++-..  -+.+-+||+++.+....+ ....+|..+.|++  ..|+.+.....+++|...-...+. 
T Consensus       320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-iQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~-  397 (447)
T KOG4497|consen  320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-IQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVG-  397 (447)
T ss_pred             ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-hhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEe-
Confidence            4445666  6666666543  245889999887654443 3567899999973  456666667789999987433333 


Q ss_pred             ecCcccCeEEEEe--cCCEEEEEeCCCcE
Q psy9182         433 LEGHEELVRCIRF--DAKRIVSGAYDGKI  459 (486)
Q Consensus       433 ~~~h~~~v~~~~~--~~~~l~s~~~dg~v  459 (486)
                      .....-.|..+.|  +|..++..+.|..-
T Consensus       398 vP~~GF~i~~l~W~~~g~~i~l~~kDafc  426 (447)
T KOG4497|consen  398 VPKKGFNIQKLQWLQPGEFIVLCGKDAFC  426 (447)
T ss_pred             cCCCCceeeeEEecCCCcEEEEEcCCceE
Confidence            3334468999999  89999999998743

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.20  E-value=1.7e-07  Score=85.42  Aligned_cols=227  Identities=13%  Similarity=0.090  Sum_probs=146.6

Q ss_pred             EEeCCCEEEEEec----------CCeEEEEECCCceeeEEEcCCcc---------cEEEEEecCCEEEEEe-C-CCcEEE
Q psy9182         240 LQYDDHKIVSGLR----------DNTIKVWDRVSLQCIKVLTGHTG---------SVLCLQYDERVIISGS-S-DSTVRV  298 (486)
Q Consensus       240 ~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~~~l~~~~-~-dg~i~v  298 (486)
                      +++|++.++++..          +..|.+||..+++.+..+.....         ....++.||+++++.. . +..|.+
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V  132 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV  132 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence            8899988877765          78999999999999988874222         2466677999888776 3 689999


Q ss_pred             EECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEe--eecCcccEE---EEEe-CCCEEEE
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV--LVGHRAAVN---VVDF-DEKYIVS  372 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~v~---~~~~-~~~~l~~  372 (486)
                      .|+.+++.+.++.... ...-...++....+-+.||......+...........  +......+.   .... +++++++
T Consensus       133 vD~~~~kvv~ei~vp~-~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~v  211 (352)
T TIGR02658       133 VDLEGKAFVRMMDVPD-CYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWP  211 (352)
T ss_pred             EECCCCcEEEEEeCCC-CcEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEE
Confidence            9999999998886533 3333334444444445666666555443322211111  111000000   1233 7888877


Q ss_pred             EeCCCcEEEEECCCc-----eEEEEEcC-------CcccE--EEEEeCCCEEEEEe----------CCCcEEEEECCCCe
Q psy9182         373 ASGDRTIKVWNTSSC-----EFVRTLNG-------HKRGI--ACLQYRDRLVVSGS----------SDNTIRLWDIECGA  428 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~-----~~~~~~~~-------~~~~v--~~~~~~~~~l~~~~----------~dg~v~iwd~~~~~  428 (486)
                      ... |+|.+.|+...     +....+..       ..+..  ..+..+++.+++..          ..+.|.++|.++++
T Consensus       212 s~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k  290 (352)
T TIGR02658       212 TYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK  290 (352)
T ss_pred             ecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe
Confidence            766 99999996442     22222221       11222  33344577766643          22579999999999


Q ss_pred             eeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCCC
Q psy9182         429 CLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAALD  469 (486)
Q Consensus       429 ~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~~  469 (486)
                      .+..+.. ...+..|++  |++ +|++.+ .++.|.+.|+.+...
T Consensus       291 vi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~  334 (352)
T TIGR02658       291 RLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKE  334 (352)
T ss_pred             EEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeE
Confidence            9998874 347888888  888 777666 678899999987654

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4547|consensus

Probab=99.19  E-value=4.2e-09  Score=97.50  Aligned_cols=139  Identities=22%  Similarity=0.296  Sum_probs=115.7

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL  318 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~  318 (486)
                      +...++-|...|.|.+|+...++....+.  .|.+.|.++.+  +-..|.+++.|+.+..|+...+..++.+......+.
T Consensus        69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~  148 (541)
T KOG4547|consen   69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVS  148 (541)
T ss_pred             CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccc
Confidence            55678899999999999999999988876  68999999987  457899999999999999999999999999899999


Q ss_pred             EEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C-----CCEEEEE-eCCCcEEEEECCC
Q psy9182         319 HLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D-----EKYIVSA-SGDRTIKVWNTSS  386 (486)
Q Consensus       319 ~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~-----~~~l~~~-~~d~~i~iwd~~~  386 (486)
                      +++++++  .+++++  +.|++||+++.+.+   ..+.+|.+.|.+++|  +     |.+++++ ..+..+.+|-.+.
T Consensus       149 sl~is~D~~~l~~as--~~ik~~~~~~kevv---~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  149 SLCISPDGKILLTAS--RQIKVLDIETKEVV---ITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             eEEEcCCCCEEEecc--ceEEEEEccCceEE---EEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            9999987  666554  68999999998755   778899999999999  3     5665554 3455677776543

>KOG0280|consensus

Probab=99.19  E-value=5.8e-09  Score=88.29  Aligned_cols=180  Identities=16%  Similarity=0.210  Sum_probs=123.9

Q ss_pred             CCcEEEEECCCCcEEE--Ee-cccCccEEEEEEc-----CC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccE---
Q psy9182         293 DSTVRVWDVNTGEMVN--TL-IHHCEAVLHLRFS-----NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV---  360 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~--~~-~~~~~~i~~~~~~-----~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v---  360 (486)
                      .|.+.+|++...+...  ++ ......+..+.|.     ++ .++-+...|.|.+|...........+.+......+   
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~  124 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEA  124 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheee
Confidence            4667788776655433  11 1223445555554     22 56677788999998876544333333332222222   


Q ss_pred             EEEEe--CCCEEEEEeCCCcEEEEECCCceE--EEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECC-CCeeeEE
Q psy9182         361 NVVDF--DEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIE-CGACLRV  432 (486)
Q Consensus       361 ~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~-~~~~~~~  432 (486)
                      .++.|  .+..++++..+|.+.+-+.....+  ++.++.|.-+.....|+   ++++.+|+.|+.+..||++ .++.+..
T Consensus       125 lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~  204 (339)
T KOG0280|consen  125 LSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWH  204 (339)
T ss_pred             eEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeee
Confidence            34444  567799999999999666554443  44888999888877774   7899999999999999998 4455544


Q ss_pred             -ecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182         433 -LEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALDPRA  472 (486)
Q Consensus       433 -~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~~~~  472 (486)
                       .+-|...|.+|.-   .+.++++|+.|-.|++||.++-.+|-.
T Consensus       205 n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~  248 (339)
T KOG0280|consen  205 NSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF  248 (339)
T ss_pred             cceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccc
Confidence             5678889999988   567999999999999999996655543

>KOG1354|consensus

Probab=99.15  E-value=2.5e-09  Score=92.33  Aligned_cols=272  Identities=17%  Similarity=0.260  Sum_probs=162.1

Q ss_pred             cccccCCccCcceEEEeecCceeeeccccccc-----ceeeecCccc------------ceeEEEeecceeEecCCCCce
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCE-----FVRTLNGHKR------------GIACLQYRDRLVVSGSSDNTI  168 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~-----~~~~l~~h~~------------~V~~~~~~~~~~~~~~~d~~i  168 (486)
                      -+.++-|.-.|.+||||+.+|.|.++.-....     ....++.|..            .|..+.|.+.           
T Consensus        27 iis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~-----------   95 (433)
T KOG1354|consen   27 IISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDD-----------   95 (433)
T ss_pred             ceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCC-----------
Confidence            35677888999999999999999999754322     2334455543            3444555321           


Q ss_pred             eccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEE
Q psy9182         169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIV  248 (486)
Q Consensus       169 ~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  248 (486)
                        .+...++..+.|.+|++|.+.............             +             ......+..+    +..+
T Consensus        96 --~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~-------------~-------------~~~~~~~~~l----r~p~  143 (433)
T KOG1354|consen   96 --GNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLP-------------E-------------EGPPGTITSL----RLPV  143 (433)
T ss_pred             --CCccEEEEecCCcceeeeeeecccccccccccc-------------c-------------cCCCCcccee----ecee
Confidence              234567788889999999986544332000000             0             0000011100    0011


Q ss_pred             EEecCCeEEEEECCCceeeEEE-cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE---EEEecc-----cCccE
Q psy9182         249 SGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM---VNTLIH-----HCEAV  317 (486)
Q Consensus       249 ~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~-----~~~~i  317 (486)
                      .+..+-.+.      ..+.+.+ .+|.-.|.++++  |...++++ .|=.|.+|+++--..   +..++.     -...|
T Consensus       144 ~~~~~~~ve------a~prRv~aNaHtyhiNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVI  216 (433)
T KOG1354|consen  144 EGRHDLEVE------ASPRRVYANAHTYHINSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVI  216 (433)
T ss_pred             eccccceee------eeeeeeccccceeEeeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHH
Confidence            111111110      1122222 368888999999  55666665 567899999864322   112222     23457


Q ss_pred             EEEEEcC---CeEEEEeCCCcEEEEECCCCCce-------------eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcE
Q psy9182         318 LHLRFSN---GMMVTCSKDRSIAVWDMVSPNEI-------------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTI  379 (486)
Q Consensus       318 ~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~-------------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i  379 (486)
                      ++..|+|   +.++-.+..|.|++-|++....-             .....+.+--..|..+.|  +|+|+++-.. -+|
T Consensus       217 TsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltv  295 (433)
T KOG1354|consen  217 TSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTV  295 (433)
T ss_pred             hhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-cee
Confidence            7778876   47888889999999999843210             111122233456777788  7888887654 689


Q ss_pred             EEEEC-CCceEEEEEcCCcc------------cE---EEEEeCC--CEEEEEeCCCcEEEEECCCCe
Q psy9182         380 KVWNT-SSCEFVRTLNGHKR------------GI---ACLQYRD--RLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       380 ~iwd~-~~~~~~~~~~~~~~------------~v---~~~~~~~--~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      ++||+ ...+++.+++.|..            .|   ..++|+|  .++++|+..+.++++++..|.
T Consensus       296 k~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  296 KLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             EEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence            99999 45677777776642            11   3445554  599999999999999976543

>KOG2139|consensus

Probab=99.14  E-value=4.2e-08  Score=85.57  Aligned_cols=308  Identities=16%  Similarity=0.228  Sum_probs=167.8

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecC-cccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~-h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ..++.-+++++.-..+|++..|-+|+++|-.. +....++. -+..|+|++|.|              ..+..|+.|+. 
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRP--------------lsaselavgCr-  161 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRP--------------LSASELAVGCR-  161 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEecc--------------CCcceeeeeec-
Confidence            34455556666556688889999999999876 55555553 356899999975              23444555554 


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCeEEEEEC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDR  261 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~  261 (486)
                      +-|.+|..+........-...                .....+.+..........+.+..||..+++++. |..|.|||.
T Consensus       162 ~gIciW~~s~tln~~r~~~~~----------------s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdp  225 (445)
T KOG2139|consen  162 AGICIWSDSRTLNANRNIRMM----------------STHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDP  225 (445)
T ss_pred             ceeEEEEcCcccccccccccc----------------cccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcC
Confidence            457799875432222110000                011111111111223334455568888888775 568999999


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC-CCcEEEEecccCccEEEEEEcCC---eEEEEeCCCc
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN-TGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRS  335 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~  335 (486)
                      .++..+.......+.+.-+.|  |+.+++++.-|+..++|+.. +....+... ..+.|....|+|.   +|++.+..- 
T Consensus       226 dtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp-  303 (445)
T KOG2139|consen  226 DTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSP-  303 (445)
T ss_pred             CCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCc-
Confidence            998877666445566666666  89999999999999999644 333333333 3448888888864   444444333 


Q ss_pred             EEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEE
Q psy9182         336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSG  413 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~  413 (486)
                       ++|.+.-......                   ..-.++....+.+-|+..-....--.--.++..+++||  |.+||+.
T Consensus       304 -~lysl~f~~~~~~-------------------~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~  363 (445)
T KOG2139|consen  304 -RLYSLTFDGEDSV-------------------FLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVI  363 (445)
T ss_pred             -eEEEEeecCCCcc-------------------ccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEE
Confidence             3333321111000                   00011111122222322111000001113455666665  7777776


Q ss_pred             eCCC--------cEEEEECCCCeeeEEec-Cc--ccCeEEEEe-----cCCEEEEEeCCCcEEEEeCC
Q psy9182         414 SSDN--------TIRLWDIECGACLRVLE-GH--EELVRCIRF-----DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       414 ~~dg--------~v~iwd~~~~~~~~~~~-~h--~~~v~~~~~-----~~~~l~s~~~dg~v~iwdl~  465 (486)
                      -..+        .|.+||.+..-.+.... +.  ......|.|     ++.+|..+=..|.+.-|++.
T Consensus       364 fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~  431 (445)
T KOG2139|consen  364 FKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT  431 (445)
T ss_pred             EcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence            5433        36677776433322220 10  111333444     56667777778888887764

>KOG0974|consensus

Probab=99.13  E-value=2.2e-09  Score=105.53  Aligned_cols=184  Identities=23%  Similarity=0.322  Sum_probs=144.7

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccE--EE----EEecCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LC----LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v--~~----~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +..+.+.++.++.++.+.+||...+.....+....-..  .+    .+++.-++++|+.-+.|.+|+....+.-..+.+|
T Consensus        95 l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GH  174 (967)
T KOG0974|consen   95 LFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGH  174 (967)
T ss_pred             hhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceeccc
Confidence            44577889999999999999998887776665332221  11    1224568999999999999998744444468899


Q ss_pred             CccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         314 CEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       314 ~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      .+.+..+.++  +.++++.+.|..+++|++.+.+...  ...-+|...+..+.+..+.+++++.|.+.++|+.. ++.+.
T Consensus       175 eG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--~~~fgHsaRvw~~~~~~n~i~t~gedctcrvW~~~-~~~l~  251 (967)
T KOG0974|consen  175 EGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--CTGFGHSARVWACCFLPNRIITVGEDCTCRVWGVN-GTQLE  251 (967)
T ss_pred             CCceEEEEEccCCcEEEEEecCcceeeeecccccccC--cccccccceeEEEEeccceeEEeccceEEEEEecc-cceeh
Confidence            9999999995  5699999999999999999987654  35568999999999977799999999999999754 45556


Q ss_pred             EEcCCcc-cEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182         392 TLNGHKR-GIACLQYR--DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       392 ~~~~~~~-~v~~~~~~--~~~l~~~~~dg~v~iwd~~~  426 (486)
                      .+..|.. .+..+..+  ...+++++.|+.+++||+..
T Consensus       252 ~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  252 VYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             hhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            7887774 46666653  56788999999999999853

>KOG0280|consensus

Probab=99.13  E-value=1.5e-08  Score=85.82  Aligned_cols=184  Identities=16%  Similarity=0.186  Sum_probs=121.5

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceee--EEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECC-CCcEEEE-ecc
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCI--KVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVN-TGEMVNT-LIH  312 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~-~~~~~~~-~~~  312 (486)
                      +++.+..++++..+|.+.+-+.......  +.++.|.-+.....|   +++.+.+|+.|+.+..||++ .++.+.. .+.
T Consensus       129 ~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kv  208 (339)
T KOG0280|consen  129 ISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKV  208 (339)
T ss_pred             eeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeeccee
Confidence            4456778999999999996665555444  478899988888877   67899999999999999999 4444444 466


Q ss_pred             cCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC----CCEEEEEeCCCcEEEEECC
Q psy9182         313 HCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD----EKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       313 ~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~d~~i~iwd~~  385 (486)
                      |...|.++.-++.   .+++|+.|..|++||.++-.....   ...-.+.|..+...    +..++++-. .-.+|-+.+
T Consensus       209 H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~---~~~v~GGVWRi~~~p~~~~~lL~~CMh-~G~ki~~~~  284 (339)
T KOG0280|consen  209 HTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLF---KAKVGGGVWRIKHHPEIFHRLLAACMH-NGAKILDSS  284 (339)
T ss_pred             eecceEEEecCCCCCceEEEeccccceeeeehhcccCccc---cCccccceEEEEecchhhhHHHHHHHh-cCceEEEec
Confidence            8888999988754   999999999999999996433211   11223666666662    223333333 335666655


Q ss_pred             Cce-----EEEEEcCCcccEEEEEeC--CCEEEEEe-CCCcEE-EEECCCC
Q psy9182         386 SCE-----FVRTLNGHKRGIACLQYR--DRLVVSGS-SDNTIR-LWDIECG  427 (486)
Q Consensus       386 ~~~-----~~~~~~~~~~~v~~~~~~--~~~l~~~~-~dg~v~-iwd~~~~  427 (486)
                      .+.     .....+.|.+-+..-.|+  ...+++++ .|+.++ +|-.-++
T Consensus       285 ~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~  335 (339)
T KOG0280|consen  285 DKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG  335 (339)
T ss_pred             ccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence            432     233444565555554554  34577755 455544 6654444

>KOG4190|consensus

Probab=99.10  E-value=1.5e-10  Score=105.82  Aligned_cols=201  Identities=19%  Similarity=0.336  Sum_probs=149.3

Q ss_pred             eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC-------CcEEEEecccCccEEEEEEcCCeEEEEeCCCcEE
Q psy9182         267 IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT-------GEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIA  337 (486)
Q Consensus       267 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-------~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~  337 (486)
                      +..+.+|...|.++..  +.+.+++++.|.+|++|.++.       ..+..+++.|+.+|.++.|-.+.-.+++.||.|+
T Consensus       728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giH  807 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIH  807 (1034)
T ss_pred             eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcce
Confidence            3556789988888766  668899999999999999863       2466788899999999999877666677899999


Q ss_pred             EEECCCCCceeeEEe--eecCcccEEEEEe-CCCEEEEE-eCCCcEEEEECCCceEEEEEc-----CCcccEEEEEe--C
Q psy9182         338 VWDMVSPNEITLRRV--LVGHRAAVNVVDF-DEKYIVSA-SGDRTIKVWNTSSCEFVRTLN-----GHKRGIACLQY--R  406 (486)
Q Consensus       338 i~d~~~~~~~~~~~~--~~~~~~~v~~~~~-~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~--~  406 (486)
                      +||.--+........  ..+..+.|.++.- +...+++| +...+|+++|.+.++....++     +....+.+++.  .
T Consensus       808 lWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~  887 (1034)
T KOG4190|consen  808 LWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK  887 (1034)
T ss_pred             eecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence            999876654431111  1223344555544 55555554 778999999999988776665     33345666666  5


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEeCCCcEEE-EeCCCC
Q psy9182         407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKV-WNLVAA  467 (486)
Q Consensus       407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~i-wdl~~~  467 (486)
                      |+.++++-..|.|.+.|.++|+.+..+....-....++- ..+.|+....|.++.+ |.-..+
T Consensus       888 GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldg  950 (1034)
T KOG4190|consen  888 GNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDG  950 (1034)
T ss_pred             cchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCC
Confidence            999999999999999999999998887766555555555 6667777778888888 875554

>KOG4190|consensus

Probab=99.10  E-value=5.8e-10  Score=102.10  Aligned_cols=219  Identities=15%  Similarity=0.276  Sum_probs=153.1

Q ss_pred             CCCEEEEEecCCeEEEEECCC-------ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec--
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVS-------LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI--  311 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--  311 (486)
                      +.+.+++++.|++|++|.++.       ..+..++..|..+|..+.|  +.+++++  .||.|.+||.--+.++..+.  
T Consensus       746 NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~giHlWDPFigr~Laq~~da  823 (1034)
T KOG4190|consen  746 NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGIHLWDPFIGRLLAQMEDA  823 (1034)
T ss_pred             cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcceeecccccchhHhhhcC
Confidence            556788999999999998754       3466788899999999998  5556654  57889999988777665432  


Q ss_pred             ---ccCccEEEEEE-cCCeEEE-EeCCCcEEEEECCCCCceeeEEee--ecCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182         312 ---HHCEAVLHLRF-SNGMMVT-CSKDRSIAVWDMVSPNEITLRRVL--VGHRAAVNVVDF--DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       312 ---~~~~~i~~~~~-~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~iw  382 (486)
                         +....|.++.- +...+++ ++...+|+++|.+..+-....+..  .+....+.+++.  .|+.++++-.+|.|.+.
T Consensus       824 pk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~L  903 (1034)
T KOG4190|consen  824 PKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAIL  903 (1034)
T ss_pred             cccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEE
Confidence               11223444433 2234444 478899999999987755444443  334455666666  89999999999999999


Q ss_pred             ECCCceEEEEEcCCcccEEEEE-eCCCEEEEEeCCCcEEE-EECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCCcEE
Q psy9182         383 NTSSCEFVRTLNGHKRGIACLQ-YRDRLVVSGSSDNTIRL-WDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIK  460 (486)
Q Consensus       383 d~~~~~~~~~~~~~~~~v~~~~-~~~~~l~~~~~dg~v~i-wd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~  460 (486)
                      |.++|+.+..++.-.-....++ ++++.++....|.++.+ |..-.|......+....+..-+.--|-.|+++.....+.
T Consensus       904 DaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~q~kpppepahflqsvgpSLV~a~~Gn~lg  983 (1034)
T KOG4190|consen  904 DARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPAHFLQSVGPSLVTAQNGNILG  983 (1034)
T ss_pred             ecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcchhhhhccCceeEEeccCcEEE
Confidence            9999999888775554443333 35677888888999999 988878776666655444433333455566665555566


Q ss_pred             EEe
Q psy9182         461 VWN  463 (486)
Q Consensus       461 iwd  463 (486)
                      +|.
T Consensus       984 VYa  986 (1034)
T KOG4190|consen  984 VYA  986 (1034)
T ss_pred             EEe
Confidence            654

>KOG1409|consensus

Probab=99.10  E-value=2.1e-08  Score=86.78  Aligned_cols=225  Identities=24%  Similarity=0.436  Sum_probs=159.2

Q ss_pred             EeCCCEEEEEecCCeEEEEE-CCCceeeEEEc-CCcccEEEEEe--cCCEEEEEeCCCcEEEEECC----CCcEEEEecc
Q psy9182         241 QYDDHKIVSGLRDNTIKVWD-RVSLQCIKVLT-GHTGSVLCLQY--DERVIISGSSDSTVRVWDVN----TGEMVNTLIH  312 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d-~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~  312 (486)
                      -+...-+++.+.|.+++||- .+.++.-..+. .-..++.++++  +...|++|-.+|++.-+.+.    .....+....
T Consensus        33 ~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~  112 (404)
T KOG1409|consen   33 IPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLA  112 (404)
T ss_pred             ccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhh
Confidence            34556688999999999994 33444433332 22456677777  56789999999999988664    3344566677


Q ss_pred             cCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEE--CCCce
Q psy9182         313 HCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN--TSSCE  388 (486)
Q Consensus       313 ~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd--~~~~~  388 (486)
                      |...+..+-|+  +..+++.+.|..+.---.+.+..+.....    ....+++.+|-.+.+.|...|.|..-.  .....
T Consensus       113 h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~----~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~  188 (404)
T KOG1409|consen  113 HQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF----ETPASALQFDALYAFVGDHSGQITMLKLEQNGCQ  188 (404)
T ss_pred             hhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe----eccCCCCceeeEEEEecccccceEEEEEeecCCc
Confidence            88889888887  45888888887776444444433221111    111112222222666666667666544  34567


Q ss_pred             EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe-eeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         389 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA-CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ++.++.+|...++++.|+  ..+|.+|..|..|.+||+.-++ ....+.+|...|..+..  .-..|++++.||.|.+|+
T Consensus       189 ~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~  268 (404)
T KOG1409|consen  189 LITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWN  268 (404)
T ss_pred             eEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEe
Confidence            789999999999999997  5789999999999999996443 34567889999999888  667899999999999999


Q ss_pred             CCCCCC
Q psy9182         464 LVAALD  469 (486)
Q Consensus       464 l~~~~~  469 (486)
                      ++....
T Consensus       269 mn~~r~  274 (404)
T KOG1409|consen  269 MNVKRV  274 (404)
T ss_pred             ccceee
Confidence            987654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.09  E-value=4.8e-08  Score=93.94  Aligned_cols=207  Identities=12%  Similarity=0.097  Sum_probs=126.7

Q ss_pred             cceEEEEeCCCEEEEEec---CCeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEE-eCCC--cEEEEECCCCcE
Q psy9182         235 KGVYCLQYDDHKIVSGLR---DNTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISG-SSDS--TVRVWDVNTGEM  306 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~-~~dg--~i~vwd~~~~~~  306 (486)
                      ....+++|||+.|+..+.   +..|.+||+.+++....  +.++... ..++.||+.|+.. +.+|  .|++||+.+++.
T Consensus       201 ~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~-~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~  279 (429)
T PRK03629        201 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGA-PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI  279 (429)
T ss_pred             eeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCC-eEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence            345678899998886542   34799999988764332  3333221 2344488877754 4444  489999988876


Q ss_pred             EEEecccCccEEEEEEcCC--eEEEEeC-CCc--EEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC---Cc
Q psy9182         307 VNTLIHHCEAVLHLRFSNG--MMVTCSK-DRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD---RT  378 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~~--~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d---~~  378 (486)
                      .. +..+...+....|+|+  .++..+. ++.  |+.+|+.+++....  ...+.......++++|++++..+.+   ..
T Consensus       280 ~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~l--t~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~  356 (429)
T PRK03629        280 RQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRI--TWEGSQNQDADVSSDGKFMVMVSSNGGQQH  356 (429)
T ss_pred             EE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEe--ecCCCCccCEEECCCCCEEEEEEccCCCce
Confidence            44 3333455677888865  5655554 344  45556665543221  1112222223344588888776543   35


Q ss_pred             EEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCc---EEEEECCCCeeeEEecCcccCeEEEEec
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT---IRLWDIECGACLRVLEGHEELVRCIRFD  446 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~---v~iwd~~~~~~~~~~~~h~~~v~~~~~~  446 (486)
                      |.+||+.+++...........-..++.+|++|+.++.++.   +.++++. |+....+.+|.+.+...+|.
T Consensus       357 I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~~~~~~~~~p~Ws  426 (429)
T PRK03629        357 IAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWS  426 (429)
T ss_pred             EEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECC-CCCeEECccCCCCcCCcccC
Confidence            8899998876433222222222345668999998887764   6777774 66677777787777777764

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.08  E-value=5.7e-08  Score=93.56  Aligned_cols=204  Identities=13%  Similarity=0.095  Sum_probs=117.4

Q ss_pred             eEEEEeCCCEEEEEecC---CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCcEEEE--ECCCCcEEE
Q psy9182         237 VYCLQYDDHKIVSGLRD---NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDSTVRVW--DVNTGEMVN  308 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~vw--d~~~~~~~~  308 (486)
                      ..+++||++.|+..+.+   ..|.+||+.+++.... ....+.+.+..|  |++.|+ +.+.+|...+|  |+.++. ..
T Consensus       200 ~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l-~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~  277 (427)
T PRK02889        200 SPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV-ANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LR  277 (427)
T ss_pred             cceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cE
Confidence            34678889888876643   3599999988875433 223334445555  787776 45677775655  555444 44


Q ss_pred             EecccCccEEEEEEcCC--eEEEEe-CCCcEEEEEC--CCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC---cEE
Q psy9182         309 TLIHHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDM--VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR---TIK  380 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~---~i~  380 (486)
                      .+..+........|+++  .++..+ .+|...+|.+  .++.... . ...+....-..++++|++++..+.++   .|.
T Consensus       278 ~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-l-t~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~  355 (427)
T PRK02889        278 RLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-V-TFTGSYNTSPRISPDGKLLAYISRVGGAFKLY  355 (427)
T ss_pred             ECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-E-ecCCCCcCceEECCCCCEEEEEEccCCcEEEE
Confidence            55444444566778764  555444 4466666655  3333211 1 12222122234455899988776554   599


Q ss_pred             EEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         381 VWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       381 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      +||+.+++...........-..++.+++.|+.++.++   .+.+.++ .|+....+..+.+.+...+|
T Consensus       356 v~d~~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~w  422 (427)
T PRK02889        356 VQDLATGQVTALTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSW  422 (427)
T ss_pred             EEECCCCCeEEccCCCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCcc
Confidence            9999887754333222222234455688877766543   3555566 35555556555555555555

>KOG2041|consensus

Probab=99.07  E-value=4e-08  Score=93.10  Aligned_cols=271  Identities=14%  Similarity=0.197  Sum_probs=175.2

Q ss_pred             cccccCCccCcceEEEeecCceeeeccccccc---------------ceeeecCcccceeEEEeecceeEecCCCCceec
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCE---------------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY  170 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~---------------~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~  170 (486)
                      ...|+.++....|+|+|+.||.++|-.+.+..               .-+++.||...|.-+.|++              
T Consensus        16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe--------------   81 (1189)
T KOG2041|consen   16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNE--------------   81 (1189)
T ss_pred             eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecc--------------
Confidence            45677888889999999999999999875431               2357889999999999973              


Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG  250 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  250 (486)
                       ..+.|-+...+|.|.+|-+-++.-.                           -..++.+.......+++..+|..++..
T Consensus        82 -~~QKLTtSDt~GlIiVWmlykgsW~---------------------------EEMiNnRnKSvV~SmsWn~dG~kIcIv  133 (1189)
T KOG2041|consen   82 -NNQKLTTSDTSGLIIVWMLYKGSWC---------------------------EEMINNRNKSVVVSMSWNLDGTKICIV  133 (1189)
T ss_pred             -ccccccccCCCceEEEEeeecccHH---------------------------HHHhhCcCccEEEEEEEcCCCcEEEEE
Confidence             4456778888999999987432210                           001111222233344555588888888


Q ss_pred             ecCCeEEEEECCCceee-EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc-------EEE----EecccCcc
Q psy9182         251 LRDNTIKVWDRVSLQCI-KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE-------MVN----TLIHHCEA  316 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~-------~~~----~~~~~~~~  316 (486)
                      ..||.|.+=.++..+.. +.+++.  ....+.|  |...++.+-.+|.+.++|....-       +..    .+......
T Consensus       134 YeDGavIVGsvdGNRIwgKeLkg~--~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~k  211 (1189)
T KOG2041|consen  134 YEDGAVIVGSVDGNRIWGKELKGQ--LLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTK  211 (1189)
T ss_pred             EccCCEEEEeeccceecchhcchh--eccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCcc
Confidence            88888877765544332 222221  1223445  66777778888999999975321       111    11222334


Q ss_pred             EEEEEEc--------CC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC--------
Q psy9182         317 VLHLRFS--------NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD--------  376 (486)
Q Consensus       317 i~~~~~~--------~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d--------  376 (486)
                      +..+.|.        |+  .++++..+|.+.+..-.+.......    .....+....|  +|..|++++.+        
T Consensus       212 ia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~----dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d  287 (1189)
T KOG2041|consen  212 IAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVV----DTGMKIVGAKWNHNGAVLAVCGNDSDADEPTD  287 (1189)
T ss_pred             ccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEE----ecccEeecceecCCCcEEEEccCcccccCccc
Confidence            5566664        22  7999999999998766554443222    22356667777  78888888754        


Q ss_pred             -CcEEEEECCCceEEEEEcCCcccEEEEEeCCC-EEEEEeCCCcEEEEECC
Q psy9182         377 -RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       377 -~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~v~iwd~~  425 (486)
                       +.|.+|. .-|+.+.+++.....|+.++|.|. +=++-..|+.|++=+++
T Consensus       288 ~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLriA~AvdsfiyfanIR  337 (1189)
T KOG2041|consen  288 SNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLRIAIAVDSFIYFANIR  337 (1189)
T ss_pred             cceEEEec-cchhheEEEecCCceeeeeEEcCCceEEEEEecceEEEEeec
Confidence             2455554 457888889988899999999643 32333447777766664

>KOG1064|consensus

Probab=99.07  E-value=3.3e-10  Score=116.88  Aligned_cols=187  Identities=15%  Similarity=0.311  Sum_probs=134.3

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      .+.++.-+|...+-+||+.||.|++|....++.+..++ +-...|+.+.|+               ..|+.+..+..||.
T Consensus      2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~---------------~qGnk~~i~d~dg~ 2274 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFN---------------HQGNKFGIVDGDGD 2274 (2439)
T ss_pred             ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhc---------------ccCCceeeeccCCc
Confidence            44566667778899999999999999999888877765 223678888886               46677888888999


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe---cCCeEEEEEC
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL---RDNTIKVWDR  261 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~---~dg~i~i~d~  261 (486)
                      +.+|......                   ...|+             .|......+.+-+..+++++   .++.+.+||.
T Consensus      2275 l~l~q~~pk~-------------------~~s~q-------------chnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDt 2322 (2439)
T KOG1064|consen 2275 LSLWQASPKP-------------------YTSWQ-------------CHNKALSDFRFIGSLLATAGRSSDNRNVCLWDT 2322 (2439)
T ss_pred             eeecccCCcc-------------------eeccc-------------cCCccccceeeeehhhhccccCCCCCcccchhc
Confidence            9999874111                   11111             22233333334445566654   4678999995


Q ss_pred             CCce-eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEE
Q psy9182         262 VSLQ-CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAV  338 (486)
Q Consensus       262 ~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i  338 (486)
                      .-.. .-..-..|.+.++++++  ..+.+++|+.+|.|++||++..+.++.++.       +. ...++++|+..|.++|
T Consensus      2323 l~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikI 2394 (2439)
T KOG1064|consen 2323 LLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-------LD-TREYFVTGSSEGNIKI 2394 (2439)
T ss_pred             ccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh-------hh-hhheeeccCcccceEE
Confidence            4321 11122679999999988  668999999999999999998888877765       22 4568999999999999


Q ss_pred             EECCCCCce
Q psy9182         339 WDMVSPNEI  347 (486)
Q Consensus       339 ~d~~~~~~~  347 (486)
                      |++.....+
T Consensus      2395 w~~s~~~ll 2403 (2439)
T KOG1064|consen 2395 WRLSEFGLL 2403 (2439)
T ss_pred             EEccccchh
Confidence            999876544

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.06  E-value=2.2e-06  Score=78.34  Aligned_cols=275  Identities=12%  Similarity=0.052  Sum_probs=156.2

Q ss_pred             CcceEEEeecC-----ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC---------
Q psy9182         115 DEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS---------  180 (486)
Q Consensus       115 ~~~~l~tg~~d-----g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s---------  180 (486)
                      ++.++..-...     ++|.+.|..+++.+.++..-..+-. + ++               +|++.++.+.         
T Consensus        11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~-~-~s---------------pDg~~lyva~~~~~R~~~G   73 (352)
T TIGR02658        11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNP-V-VA---------------SDGSFFAHASTVYSRIARG   73 (352)
T ss_pred             CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCce-e-EC---------------CCCCEEEEEeccccccccC
Confidence            44445443332     8999999999998888764332222 2 32               3444443333         


Q ss_pred             -CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-c-CCeEE
Q psy9182         181 -HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-R-DNTIK  257 (486)
Q Consensus       181 -~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~-dg~i~  257 (486)
                       .+..|.+||..+.+.......+...                      ..........+.+++||+++++.. . +..|.
T Consensus        74 ~~~d~V~v~D~~t~~~~~~i~~p~~p----------------------~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~  131 (352)
T TIGR02658        74 KRTDYVEVIDPQTHLPIADIELPEGP----------------------RFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG  131 (352)
T ss_pred             CCCCEEEEEECccCcEEeEEccCCCc----------------------hhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence             5789999998776654333221100                      000123345678999999998776 3 68999


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCC-CcEE-EE---eccc-----CccEEEEEE-cCCe
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT-GEMV-NT---LIHH-----CEAVLHLRF-SNGM  326 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~-~~---~~~~-----~~~i~~~~~-~~~~  326 (486)
                      +.|+.+++.+..+..... ..-+........+-+.||......+.+ |+.. ..   +...     ..+  .... .+..
T Consensus       132 VvD~~~~kvv~ei~vp~~-~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP--~~~~~dg~~  208 (352)
T TIGR02658       132 VVDLEGKAFVRMMDVPDC-YHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP--AYSNKSGRL  208 (352)
T ss_pred             EEECCCCcEEEEEeCCCC-cEEEEecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCC--ceEcCCCcE
Confidence            999999999988875332 111222221122333455544433322 2211 11   1110     111  1112 2335


Q ss_pred             EEEEeCCCcEEEEECCCCCceee--EEeeec-------Cccc--EEEEEeCCCEEEEEe----------CCCcEEEEECC
Q psy9182         327 MVTCSKDRSIAVWDMVSPNEITL--RRVLVG-------HRAA--VNVVDFDEKYIVSAS----------GDRTIKVWNTS  385 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~-------~~~~--v~~~~~~~~~l~~~~----------~d~~i~iwd~~  385 (486)
                      +++... |.|.+.|+........  ......       ....  ..++..+++.+++..          ..+.|.++|..
T Consensus       209 ~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~  287 (352)
T TIGR02658       209 VWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAK  287 (352)
T ss_pred             EEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECC
Confidence            555444 9999999755432211  111100       1112  234444778777743          22579999999


Q ss_pred             CceEEEEEcCCcccEEE--EEeCCC-EEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182         386 SCEFVRTLNGHKRGIAC--LQYRDR-LVVSGS-SDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~--~~~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~  433 (486)
                      +++.+..+... ..+..  ++.+++ +|++.. .++.|.++|..+++.+..+
T Consensus       288 t~kvi~~i~vG-~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       288 TGKRLRKIELG-HEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             CCeEEEEEeCC-CceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence            99999988742 23444  444677 776665 6788999999999999887

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.06  E-value=2.5e-07  Score=89.52  Aligned_cols=206  Identities=17%  Similarity=0.149  Sum_probs=128.9

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC---CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS---DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      ..|.++|.... ..+.+..+...+.+..|  ||+.|+..+.   +..|++||+.+++.. .+......+....|+|+  .
T Consensus       182 ~~l~~~d~dg~-~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~  259 (435)
T PRK05137        182 KRLAIMDQDGA-NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRK  259 (435)
T ss_pred             eEEEEECCCCC-CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCE
Confidence            37888887544 44556667778888877  8888877653   468999999888653 34444556677788864  4


Q ss_pred             E-EEEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-C--CcEEEEECCCceEEEEEcCCcc
Q psy9182         327 M-VTCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-D--RTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       327 l-~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      + ++.+.++.  |++||+.++....    +..+........|  ||+.++..+. +  ..|+++|+.+++.. .+..+..
T Consensus       260 la~~~~~~g~~~Iy~~d~~~~~~~~----Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~  334 (435)
T PRK05137        260 VVMSLSQGGNTDIYTMDLRSGTTTR----LTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGG  334 (435)
T ss_pred             EEEEEecCCCceEEEEECCCCceEE----ccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCC
Confidence            4 45555554  7777887765422    2233333334444  8888877663 3  36888898776543 3332333


Q ss_pred             cEEE--EEeCCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC------CcEEEEeCC
Q psy9182         399 GIAC--LQYRDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD------GKIKVWNLV  465 (486)
Q Consensus       399 ~v~~--~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d------g~v~iwdl~  465 (486)
                      .+..  ++.+|+.|+....+   ..|.+||+..+.. ..+.. ...+....|  ||+.|+..+.+      ..|.++|+.
T Consensus       335 ~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~  412 (435)
T PRK05137        335 RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT  412 (435)
T ss_pred             cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence            3333  44468888776643   3688889865543 33332 224566677  88887765543      257788886


Q ss_pred             CCC
Q psy9182         466 AAL  468 (486)
Q Consensus       466 ~~~  468 (486)
                      .+.
T Consensus       413 g~~  415 (435)
T PRK05137        413 GRN  415 (435)
T ss_pred             CCc
Confidence            643

>KOG2315|consensus

Probab=99.05  E-value=4.1e-07  Score=84.09  Aligned_cols=315  Identities=10%  Similarity=0.161  Sum_probs=178.7

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC---CC
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---DD  183 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---dg  183 (486)
                      +...+++++|+++|.+. ++.++|++..+++.+.+...-  .+.++.|++....-.....        .-+....   .-
T Consensus        37 ~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~--------~~i~~~~~~~~p  105 (566)
T KOG2315|consen   37 CNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEP--------WAIYGPKNASNP  105 (566)
T ss_pred             ceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccc--------cccccCCCCCCC
Confidence            45667788898887765 569999999988654444433  6778888743221111100        0000000   23


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  263 (486)
                      .+.+|++++.........          .                   ........++.|.. +++--..+.+.+|+..+
T Consensus       106 n~~v~~vet~~~~s~~q~----------k-------------------~Q~~W~~qfs~dEs-l~arlv~nev~f~~~~~  155 (566)
T KOG2315|consen  106 NVLVYNVETGVQRSQIQK----------K-------------------MQNGWVPQFSIDES-LAARLVSNEVQFYDLGS  155 (566)
T ss_pred             ceeeeeeccceehhheeh----------h-------------------hhcCcccccccchh-hhhhhhcceEEEEecCC
Confidence            456788755221111000          0                   00111222333332 33344566899999877


Q ss_pred             ceeeEEEcCCcccEEEEEe--c--CCEEEE-----EeCCCcEEEEECCCCcEEEEe---cccCccEEEEEEcCC---eEE
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--D--ERVIIS-----GSSDSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFSNG---MMV  328 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~--~~~l~~-----~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~~~---~l~  328 (486)
                      .+.+.. +-|...|..+.+  .  ...+++     .+.-+.|++|.......-..+   ......-..+.|+..   +|+
T Consensus       156 f~~~~~-kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLv  234 (566)
T KOG2315|consen  156 FKTIQH-KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLV  234 (566)
T ss_pred             ccceee-eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEE
Confidence            433221 224556666655  2  234443     344567999987632211111   111222344556532   333


Q ss_pred             EEe--C---------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEE--EeCCCcEEEEECCCceEEEEE
Q psy9182         329 TCS--K---------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVS--ASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       329 ~~~--~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      .++  -         +..++++++.. +..   .......++|.++.|  +++-+++  |-.-..+.|||++ +.++..+
T Consensus       235 LastdVDktn~SYYGEq~Lyll~t~g-~s~---~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df  309 (566)
T KOG2315|consen  235 LASTDVDKTNASYYGEQTLYLLATQG-ESV---SVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF  309 (566)
T ss_pred             EEEEeecCCCccccccceEEEEEecC-ceE---EEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC
Confidence            332  2         23677887762 221   223345789999999  5544443  4567789999986 5666666


Q ss_pred             cCCcccEEEEEeCCCEEEEEeC---CCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeC------CCcEEEEeC
Q psy9182         394 NGHKRGIACLQYRDRLVVSGSS---DNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAY------DGKIKVWNL  464 (486)
Q Consensus       394 ~~~~~~v~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~------dg~v~iwdl  464 (486)
                      ........-+..+|++++.++-   -|.+.|||+.+.+++..+......+..-+.||.+++|+..      |+.++||+.
T Consensus       310 ~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy  389 (566)
T KOG2315|consen  310 PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY  389 (566)
T ss_pred             CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence            5433333334446898887775   4889999999999998888766555444449999998874      788999998


Q ss_pred             CCCC
Q psy9182         465 VAAL  468 (486)
Q Consensus       465 ~~~~  468 (486)
                      ....
T Consensus       390 tG~~  393 (566)
T KOG2315|consen  390 TGSL  393 (566)
T ss_pred             cCce
Confidence            7653

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=7.6e-08  Score=93.01  Aligned_cols=202  Identities=18%  Similarity=0.149  Sum_probs=118.7

Q ss_pred             EEEEeCCCEEEEEecC---CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCC--cEEEEECCCCcEEEE
Q psy9182         238 YCLQYDDHKIVSGLRD---NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDS--TVRVWDVNTGEMVNT  309 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg--~i~vwd~~~~~~~~~  309 (486)
                      ..++|+++.|+..+.+   ..|++||+.+++.... ....+...+..|  ||+.++ +.+.+|  .|++||+.+++.. .
T Consensus       209 p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l-~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~  286 (433)
T PRK04922        209 PAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV-ASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-R  286 (433)
T ss_pred             ccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe-ccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-E
Confidence            3566788887776633   4699999988765432 223333334555  787665 445555  5999999888753 4


Q ss_pred             ecccCccEEEEEEcCC--eEEEEe-CCCc--EEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC---cEEE
Q psy9182         310 LIHHCEAVLHLRFSNG--MMVTCS-KDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR---TIKV  381 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~--~l~~~~-~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~---~i~i  381 (486)
                      +..+........|+++  .++..+ .+|.  |+++|+.+++....  ...+....-.+++.+|++++..+.++   .|.+
T Consensus       287 lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l--t~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v  364 (433)
T PRK04922        287 LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL--TFQGNYNARASVSPDGKKIAMVHGSGGQYRIAV  364 (433)
T ss_pred             CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe--ecCCCCccCEEECCCCCEEEEEECCCCceeEEE
Confidence            4444444566788764  566555 3444  66667766543221  11222222224444899888765443   5999


Q ss_pred             EECCCceEEEEEc-CCcccEEEEEeCCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         382 WNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       382 wd~~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      ||+.+++.. .+. +....-..++.+|++++..+.+   +.|.++++. +.....+..+.+.+...+|
T Consensus       365 ~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~~~l~~~~g~~~~p~w  430 (433)
T PRK04922        365 MDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVRQRLVSADGEVREPAW  430 (433)
T ss_pred             EECCCCCeE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEEcccCCCCCCCCcc
Confidence            999887754 333 2211222445568887766653   457788875 4455556555555555555

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.03  E-value=4.5e-07  Score=87.30  Aligned_cols=206  Identities=13%  Similarity=0.105  Sum_probs=125.0

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC---CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS---DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      ..|.++|........ +..+...+.+..|  ||+.|+..+.   +..|.+||+.+++..... ..........|+|+  .
T Consensus       179 ~~l~~~d~dg~~~~~-lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~~~~~~~~~~SPDG~~  256 (429)
T PRK03629        179 YELRVSDYDGYNQFV-VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNGAPAFSPDGSK  256 (429)
T ss_pred             eeEEEEcCCCCCCEE-eecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CCCCCcCCeEECCCCCE
Confidence            378889887654433 3345566777777  8888876542   357999999888643322 22233446778765  5


Q ss_pred             EEEE-eCCC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC-C--cEEEEECCCceEEEEEcCCcc
Q psy9182         327 MVTC-SKDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD-R--TIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       327 l~~~-~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      ++.. ..+|  .|++||+.+++...    +..+...+....|  ||+.|+..+.+ +  .|.++|+.+++. ..+..+..
T Consensus       257 La~~~~~~g~~~I~~~d~~tg~~~~----lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~  331 (429)
T PRK03629        257 LAFALSKTGSLNLYVMDLASGQIRQ----VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGS  331 (429)
T ss_pred             EEEEEcCCCCcEEEEEECCCCCEEE----ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCC
Confidence            5543 4444  58899998765432    2222334455555  88888776654 3  455557776654 33332322


Q ss_pred             cE--EEEEeCCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCc---EEEEeCCCCC
Q psy9182         399 GI--ACLQYRDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGK---IKVWNLVAAL  468 (486)
Q Consensus       399 ~v--~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~---v~iwdl~~~~  468 (486)
                      ..  ..++.+|++++..+.+   ..|.+||+.+++.. .+... .......|  ||++|+.++.++.   +.+++++...
T Consensus       332 ~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~  409 (429)
T PRK03629        332 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRF  409 (429)
T ss_pred             CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCC
Confidence            23  3445578888776543   35889999887644 33321 12234455  9999999888775   6778876543

>KOG1912|consensus

Probab=99.02  E-value=1.8e-08  Score=96.13  Aligned_cols=341  Identities=13%  Similarity=0.116  Sum_probs=199.0

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCc-ceeecCCCCCcceeeeccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE-FQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~-~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      .-+||+++..|.|.+||...+..+..+..|..++..++|-+..            .+. ..|+.-.....+.+|+..++.
T Consensus        79 ~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~r------------d~Srd~LlaIh~ss~lvLwntdtG~  146 (1062)
T KOG1912|consen   79 QLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPAR------------DDSRDVLLAIHGSSTLVLWNTDTGE  146 (1062)
T ss_pred             ceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeecc------------CcchheeEEecCCcEEEEEEccCCc
Confidence            4578899999999999999999999999999999999985321            111 233444444455555544443


Q ss_pred             ccccCCCCCCCC-----CCCCcc-------------------cccccccCceeEEEE--------------eccCCCcc-
Q psy9182         195 ETPIQGGGGGGP-----PPSGPS-------------------IENNWRMGKFLLQRI--------------NCRSENSK-  235 (486)
Q Consensus       195 ~~~~~~~~~~~~-----~~~~~~-------------------~~~~~~~~~~~~~~~--------------~~~~~~~~-  235 (486)
                      ............     .+....                   .+..-....+.+..-              +....... 
T Consensus       147 k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~s  226 (1062)
T KOG1912|consen  147 KFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPAS  226 (1062)
T ss_pred             eeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcc
Confidence            221111100000     000000                   000000000000000              00000000 


Q ss_pred             -------ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCC
Q psy9182         236 -------GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTG  304 (486)
Q Consensus       236 -------~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~  304 (486)
                             .-++++|.-+.++.......+.++|++-..++....-..+.+.-+.+  +  ...|++.-.||.+.+|-.+..
T Consensus       227 a~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~  306 (1062)
T KOG1912|consen  227 AYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEE  306 (1062)
T ss_pred             hhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeecc
Confidence                   11234555555666667778999999988888777655554444443  4  467999999999999976542


Q ss_pred             c----------------EEEEe---cccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEE-------------
Q psy9182         305 E----------------MVNTL---IHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRR-------------  351 (486)
Q Consensus       305 ~----------------~~~~~---~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------  351 (486)
                      .                ..+.+   ......+...+.+ ++.++.-..+|.+.+|.+.+++......             
T Consensus       307 ~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~  386 (1062)
T KOG1912|consen  307 PTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFN  386 (1062)
T ss_pred             CccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCccccccccccccccccc
Confidence            1                11111   1111111111112 3455555667888888887543211000             


Q ss_pred             ---------------eeecCcccEEEEEe-------------CC-------CEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         352 ---------------VLVGHRAAVNVVDF-------------DE-------KYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       352 ---------------~~~~~~~~v~~~~~-------------~~-------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                                     ...+|....++...             .+       .+++.|...|+|.++|+.++..-..+..|
T Consensus       387 ~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvh  466 (1062)
T KOG1912|consen  387 LSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVH  466 (1062)
T ss_pred             CceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhccc
Confidence                           01123333332221             11       36889999999999999999999999999


Q ss_pred             cccEEEEEeCCCE-EEEEe----------CCCcEEEEECCCCeeeE--Eec-CcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         397 KRGIACLQYRDRL-VVSGS----------SDNTIRLWDIECGACLR--VLE-GHEELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       397 ~~~v~~~~~~~~~-l~~~~----------~dg~v~iwd~~~~~~~~--~~~-~h~~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      ...|.++.|-|.. |++.+          .-+.+.+-|+++|....  .+. ....+|..+..  .+.||+..-.|.-+.
T Consensus       467 t~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plE  546 (1062)
T KOG1912|consen  467 TSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLE  546 (1062)
T ss_pred             ccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchH
Confidence            9999999996543 44333          23457788999885433  222 34568888887  889999999999999


Q ss_pred             EEeCCCCC
Q psy9182         461 VWNLVAAL  468 (486)
Q Consensus       461 iwdl~~~~  468 (486)
                      +||+++..
T Consensus       547 iwd~kt~~  554 (1062)
T KOG1912|consen  547 IWDLKTLR  554 (1062)
T ss_pred             HHhhccch
Confidence            99997654

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.00  E-value=8e-08  Score=81.24  Aligned_cols=107  Identities=10%  Similarity=0.293  Sum_probs=81.8

Q ss_pred             CcccEEEEEe--CCCEEEEE--eCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCC
Q psy9182         356 HRAAVNVVDF--DEKYIVSA--SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSS---DNTIRLWDIEC  426 (486)
Q Consensus       356 ~~~~v~~~~~--~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~v~iwd~~~  426 (486)
                      ...+|.+++|  +++.+++.  ..++.|.+||++ ++.+..+..  ..+..+.|  +|++|++++.   .|.|.+||.++
T Consensus        58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~--~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~  134 (194)
T PF08662_consen   58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGT--QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK  134 (194)
T ss_pred             CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeecC--CCceEEEECCCCCEEEEEEccCCCcEEEEEECCC
Confidence            3456999999  67765544  457799999997 676777653  44556666  5899998875   46799999998


Q ss_pred             CeeeEEecCcccCeEEEEe--cCCEEEEEeC------CCcEEEEeCCCC
Q psy9182         427 GACLRVLEGHEELVRCIRF--DAKRIVSGAY------DGKIKVWNLVAA  467 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~------dg~v~iwdl~~~  467 (486)
                      .+.+...+..  .++.++|  ||++|+++..      |+.++||++...
T Consensus       135 ~~~i~~~~~~--~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  135 KKKISTFEHS--DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             CEEeeccccC--cEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence            8888776533  4788999  9999998874      788999999754

>KOG2139|consensus

Probab=99.00  E-value=1.1e-07  Score=83.07  Aligned_cols=224  Identities=14%  Similarity=0.250  Sum_probs=139.3

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc-CCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC----cE--
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG----EM--  306 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~----~~--  306 (486)
                      .+++++.-..++++..|-.|++||... ++...++ .....|+|++|   .++.+++|+..| |.+|.....    ..  
T Consensus       103 ~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~  180 (445)
T KOG2139|consen  103 GVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIR  180 (445)
T ss_pred             eEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccc
Confidence            445555455688899999999999776 4444444 34457899999   567888888876 999976421    11  


Q ss_pred             --------EEEecccCccEEEEEEcCC--eEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE
Q psy9182         307 --------VNTLIHHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA  373 (486)
Q Consensus       307 --------~~~~~~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  373 (486)
                              +....+| ..|+++.|.++  .+++++ .+..|.+||..++....+.   ....+.+.-+.|  |+.+++++
T Consensus       181 ~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~---~~glgg~slLkwSPdgd~lfaA  256 (445)
T KOG2139|consen  181 MMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI---PKGLGGFSLLKWSPDGDVLFAA  256 (445)
T ss_pred             cccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc---ccCCCceeeEEEcCCCCEEEEe
Confidence                    1111233 67999999865  555554 5778999999998766443   123445556666  99999999


Q ss_pred             eCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEE-EEeCCCcEEEEECCC--Ce-----------eeEEec---
Q psy9182         374 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVV-SGSSDNTIRLWDIEC--GA-----------CLRVLE---  434 (486)
Q Consensus       374 ~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~--~~-----------~~~~~~---  434 (486)
                      +-|+..++|+.....-........+.|..-.|+  |+.|+ +.+..-.|+-.....  +.           ++..+.   
T Consensus       257 t~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~t  336 (445)
T KOG2139|consen  257 TCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVT  336 (445)
T ss_pred             cccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccchhhh
Confidence            999999999654432222333333466666664  65544 443333333222211  00           011111   


Q ss_pred             ---C---cccCeEEEEe--cCCEEEEEeCCC--------cEEEEeCCC
Q psy9182         435 ---G---HEELVRCIRF--DAKRIVSGAYDG--------KIKVWNLVA  466 (486)
Q Consensus       435 ---~---h~~~v~~~~~--~~~~l~s~~~dg--------~v~iwdl~~  466 (486)
                         +   -.+++.+++|  .|.+|++.-..+        .|.+||.+.
T Consensus       337 i~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~  384 (445)
T KOG2139|consen  337 ICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRK  384 (445)
T ss_pred             hhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccc
Confidence               1   1357889999  788988875543        356677654

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.00  E-value=3.7e-07  Score=88.23  Aligned_cols=206  Identities=18%  Similarity=0.156  Sum_probs=126.4

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC---CcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD---STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      ..|.+||.... ..+.+..+...+.+..|  |++.|+..+.+   ..|++||+.+++... +...........|+++  .
T Consensus       184 ~~l~i~D~~g~-~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~  261 (433)
T PRK04922        184 YALQVADSDGY-NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRR  261 (433)
T ss_pred             EEEEEECCCCC-CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCE
Confidence            36889997644 34445556667777777  78888877643   469999998887543 2233334456778754  4


Q ss_pred             E-EEEeCCC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CCc--EEEEECCCceEEEE-EcCCc
Q psy9182         327 M-VTCSKDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DRT--IKVWNTSSCEFVRT-LNGHK  397 (486)
Q Consensus       327 l-~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~--i~iwd~~~~~~~~~-~~~~~  397 (486)
                      + ++.+.+|  .|++||+.+++...    +..+........|  ||+.++.++. +|.  |+++|+.+++.... +.+..
T Consensus       262 l~~~~s~~g~~~Iy~~d~~~g~~~~----lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~  337 (433)
T PRK04922        262 LALTLSRDGNPEIYVMDLGSRQLTR----LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNY  337 (433)
T ss_pred             EEEEEeCCCCceEEEEECCCCCeEE----CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCC
Confidence            4 4445555  59999998775322    2233333334455  8888877664 444  77778777654322 22222


Q ss_pred             ccEEEEEeCCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC---CcEEEEeCCCC
Q psy9182         398 RGIACLQYRDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD---GKIKVWNLVAA  467 (486)
Q Consensus       398 ~~v~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d---g~v~iwdl~~~  467 (486)
                      ..-..++.+|++++..+.++   .|.+||+.+++.. .+. +........|  ||++|+..+.+   +.|.++++...
T Consensus       338 ~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~  413 (433)
T PRK04922        338 NARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR  413 (433)
T ss_pred             ccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            22234455788888765443   6999999887654 333 2223344566  88887766653   35778887654

>KOG1354|consensus

Probab=98.99  E-value=9.7e-08  Score=82.80  Aligned_cols=232  Identities=13%  Similarity=0.270  Sum_probs=148.4

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCce-----eeEEEcCCc------------ccEEEEEe----cCCEEEEEeCCC
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-----CIKVLTGHT------------GSVLCLQY----DERVIISGSSDS  294 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~------------~~v~~~~~----~~~~l~~~~~dg  294 (486)
                      ..+-+...|.+|++|..+|.|.+|.-....     ....++.|.            ..|..+.|    +...++..+.|.
T Consensus        29 s~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdk  108 (433)
T KOG1354|consen   29 SAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDK  108 (433)
T ss_pred             eeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCc
Confidence            334456689999999999999999643322     234444453            34567777    345777788999


Q ss_pred             cEEEEECCCCcEEE--------------------Ee----------------cccCccEEEEEEcCC-eEEEEeCCCcEE
Q psy9182         295 TVRVWDVNTGEMVN--------------------TL----------------IHHCEAVLHLRFSNG-MMVTCSKDRSIA  337 (486)
Q Consensus       295 ~i~vwd~~~~~~~~--------------------~~----------------~~~~~~i~~~~~~~~-~l~~~~~dg~i~  337 (486)
                      +|++|-+.......                    .+                ..|.-.|.+++++.+ ..+....|=.|.
T Consensus       109 tiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRIN  188 (433)
T KOG1354|consen  109 TIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADDLRIN  188 (433)
T ss_pred             ceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccceeee
Confidence            99999875321110                    00                134555677777654 555566788999


Q ss_pred             EEECCCCCceeeEEeeecC-----cccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEE----EEEc-----------
Q psy9182         338 VWDMVSPNEITLRRVLVGH-----RAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFV----RTLN-----------  394 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~-----~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~-----------  394 (486)
                      +|+++-........-...+     ..-|++..|   ..+.++-.+..|+|++.|++...+.    ..+.           
T Consensus       189 LWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsff  268 (433)
T KOG1354|consen  189 LWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFF  268 (433)
T ss_pred             eccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhH
Confidence            9998754322111111111     234566666   4567888888999999999853221    1111           


Q ss_pred             -CCcccEEEEEe--CCCEEEEEeCCCcEEEEEC-CCCeeeEEecCcc------------cCe---EEEEe--cCCEEEEE
Q psy9182         395 -GHKRGIACLQY--RDRLVVSGSSDNTIRLWDI-ECGACLRVLEGHE------------ELV---RCIRF--DAKRIVSG  453 (486)
Q Consensus       395 -~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~-~~~~~~~~~~~h~------------~~v---~~~~~--~~~~l~s~  453 (486)
                       .--..|..+.|  +|+++++-.. -+|++||+ ...+++.++.-|.            +.|   ..++|  ++.+++||
T Consensus       269 seiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TG  347 (433)
T KOG1354|consen  269 SEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTG  347 (433)
T ss_pred             HHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecc
Confidence             11134566666  4888887643 68999999 4466777776653            223   24666  55599999


Q ss_pred             eCCCcEEEEeCCCCC
Q psy9182         454 AYDGKIKVWNLVAAL  468 (486)
Q Consensus       454 ~~dg~v~iwdl~~~~  468 (486)
                      +....++++++..+.
T Consensus       348 sy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  348 SYNNVFRVFNLARGS  362 (433)
T ss_pred             cccceEEEecCCCCc
Confidence            999999999966554

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.98  E-value=1.8e-06  Score=84.54  Aligned_cols=281  Identities=12%  Similarity=0.145  Sum_probs=166.5

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSE  195 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~  195 (486)
                      +..+..++.++.|.-.|..+|+.+..++.........   +. ++.    ..+.+.++..++.++.++.|..+|.++++.
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~---~~-~~~----~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~  132 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGC---CD-VVN----RGVAYWDPRKVFFGTFDGRLVALDAETGKQ  132 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccc---cc-ccc----CCcEEccCCeEEEecCCCeEEEEECCCCCE
Confidence            4567778888999999999999887775433211000   00 000    001112324566677788888888777665


Q ss_pred             cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe---------cCCeEEEEECCCcee
Q psy9182         196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL---------RDNTIKVWDRVSLQC  266 (486)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~---------~dg~i~i~d~~~~~~  266 (486)
                      ...........        .     ..     .   .....    ...+..++.++         .+|.+..+|..+|+.
T Consensus       133 ~W~~~~~~~~~--------~-----~~-----~---i~ssP----~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~  187 (488)
T cd00216         133 VWKFGNNDQVP--------P-----GY-----T---MTGAP----TIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKL  187 (488)
T ss_pred             eeeecCCCCcC--------c-----ce-----E---ecCCC----EEECCEEEEeccccccccCCCCcEEEEEECCCCce
Confidence            43332211000        0     00     0   00000    11224444543         468899999999998


Q ss_pred             eEEEcCCcc--------------------cEE-EEEe--cCCEEEEEeCCC------------------cEEEEECCCCc
Q psy9182         267 IKVLTGHTG--------------------SVL-CLQY--DERVIISGSSDS------------------TVRVWDVNTGE  305 (486)
Q Consensus       267 ~~~~~~~~~--------------------~v~-~~~~--~~~~l~~~~~dg------------------~i~vwd~~~~~  305 (486)
                      +..+.....                    .+. ....  .+..++.++.++                  .|.-+|.++|+
T Consensus       188 ~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~  267 (488)
T cd00216         188 LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK  267 (488)
T ss_pred             eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC
Confidence            877654211                    111 1222  356788887665                  79999999999


Q ss_pred             EEEEecccCcc-----------EEEEE-EcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEE
Q psy9182         306 MVNTLIHHCEA-----------VLHLR-FSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI  370 (486)
Q Consensus       306 ~~~~~~~~~~~-----------i~~~~-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  370 (486)
                      .+..++.....           +..+. ..+.   .+++++.+|.+..+|.++++.+-.....      ...+..+...+
T Consensus       268 ~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~------~~~~~~~~~~v  341 (488)
T cd00216         268 VKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV------EQPMAYDPGLV  341 (488)
T ss_pred             EEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee------ccccccCCceE
Confidence            98887532111           11111 1222   5788889999999999999865433221      00112222333


Q ss_pred             EEE------------------eCCCcEEEEECCCceEEEEEcCCc--------ccE--EEEEeCCCEEEEEeCCCcEEEE
Q psy9182         371 VSA------------------SGDRTIKVWNTSSCEFVRTLNGHK--------RGI--ACLQYRDRLVVSGSSDNTIRLW  422 (486)
Q Consensus       371 ~~~------------------~~d~~i~iwd~~~~~~~~~~~~~~--------~~v--~~~~~~~~~l~~~~~dg~v~iw  422 (486)
                      +.+                  ..+|.+.-.|..+|+.+-+.....        ...  ..+...+..|++++.||.|+.+
T Consensus       342 yv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~al  421 (488)
T cd00216         342 YLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAF  421 (488)
T ss_pred             EEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEE
Confidence            332                  246789999999998877765431        111  2344567889999999999999


Q ss_pred             ECCCCeeeEEecC
Q psy9182         423 DIECGACLRVLEG  435 (486)
Q Consensus       423 d~~~~~~~~~~~~  435 (486)
                      |.++|+.+...+-
T Consensus       422 d~~tG~~lW~~~~  434 (488)
T cd00216         422 DATTGKELWKFRT  434 (488)
T ss_pred             ECCCCceeeEEEC
Confidence            9999999988764

The alignment model contains an 8-bladed beta-propeller.

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.97  E-value=1.4e-07  Score=79.78  Aligned_cols=111  Identities=14%  Similarity=0.335  Sum_probs=80.2

Q ss_pred             CccEEEEEEcCC--eEE--EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEEC
Q psy9182         314 CEAVLHLRFSNG--MMV--TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNT  384 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~  384 (486)
                      .++|.+++|+|+  .++  .|..++.|.+||++ .+.+   ..+  +...+..+.|  +|+++++++.   .|.|.+||.
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i---~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~  132 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKI---FSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDV  132 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEe---Eee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEEC
Confidence            456999999975  443  34567899999996 2222   222  2445566777  8899999874   467999999


Q ss_pred             CCceEEEEEcCCcccEEEEEe--CCCEEEEEeC------CCcEEEEECCCCeeeEEe
Q psy9182         385 SSCEFVRTLNGHKRGIACLQY--RDRLVVSGSS------DNTIRLWDIECGACLRVL  433 (486)
Q Consensus       385 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------dg~v~iwd~~~~~~~~~~  433 (486)
                      ++.+.+...+...  ++.+.|  +|+++++++.      |+.++||+.. |+.+...
T Consensus       133 ~~~~~i~~~~~~~--~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~  186 (194)
T PF08662_consen  133 RKKKKISTFEHSD--ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKK  186 (194)
T ss_pred             CCCEEeeccccCc--EEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEec
Confidence            9988887776443  566666  5999998874      7889999986 7766554

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.96  E-value=3.6e-05  Score=72.05  Aligned_cols=213  Identities=16%  Similarity=0.232  Sum_probs=127.4

Q ss_pred             CccceEEEEeCCCEEEEEe-cCCeEEEEECCC-ceeeEE---Ec----------CCcccEEEEEe--cCCEEEEEeC-CC
Q psy9182         233 NSKGVYCLQYDDHKIVSGL-RDNTIKVWDRVS-LQCIKV---LT----------GHTGSVLCLQY--DERVIISGSS-DS  294 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~~-~~~~~~---~~----------~~~~~v~~~~~--~~~~l~~~~~-dg  294 (486)
                      ....-+++++++++|+++. .+|.|.++++.. +.....   +.          .......++.+  +++++++... ..
T Consensus        87 ~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D  166 (345)
T PF10282_consen   87 SSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGAD  166 (345)
T ss_dssp             SCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTT
T ss_pred             CCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCC
Confidence            3334566778999988886 588999999877 443322   21          11233566666  7787777643 35


Q ss_pred             cEEEEECCCCc--EE--EEe-cccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCC-ceeeEEeeecC------ccc
Q psy9182         295 TVRVWDVNTGE--MV--NTL-IHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPN-EITLRRVLVGH------RAA  359 (486)
Q Consensus       295 ~i~vwd~~~~~--~~--~~~-~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~------~~~  359 (486)
                      .|.+|++....  ..  ..+ ......-..+.|+++  ++ ++.-.++.|.+|++.... ...........      ...
T Consensus       167 ~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~  246 (345)
T PF10282_consen  167 RVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENA  246 (345)
T ss_dssp             EEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSS
T ss_pred             EEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCC
Confidence            79999987654  32  222 233455788999876  44 455567889999988222 22222222111      113


Q ss_pred             EEEEEe--CCCEEEEEe-CCCcEEEEECC--Cc--eEEEEEcCCcccEEEEEe--CCCEEEEEe-CCCcEEEEEC--CCC
Q psy9182         360 VNVVDF--DEKYIVSAS-GDRTIKVWNTS--SC--EFVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWDI--ECG  427 (486)
Q Consensus       360 v~~~~~--~~~~l~~~~-~d~~i~iwd~~--~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~v~iwd~--~~~  427 (486)
                      ...+.+  ||++|+++. ..+.|.+|++.  ++  +.+..+.........+.+  +|++|+++. .++.|.+|++  ++|
T Consensus       247 ~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG  326 (345)
T PF10282_consen  247 PAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTG  326 (345)
T ss_dssp             EEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred             ceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCC
Confidence            344444  899888776 46789999983  23  334444433344566666  689888877 5678999976  567


Q ss_pred             eeeEEec-CcccCeEEEEe
Q psy9182         428 ACLRVLE-GHEELVRCIRF  445 (486)
Q Consensus       428 ~~~~~~~-~h~~~v~~~~~  445 (486)
                      .+...-. ..-....||.|
T Consensus       327 ~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  327 KLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEEEEEEEEESSSEEEEEE
T ss_pred             cEEEecccccCCCCEEEeC
Confidence            6554432 22344566655

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.95  E-value=1.5e-05  Score=74.54  Aligned_cols=235  Identities=13%  Similarity=0.205  Sum_probs=142.7

Q ss_pred             CCccceEEEEeCCCEEEEEec----CCeEEEEECCCc--e--eeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEE
Q psy9182         232 ENSKGVYCLQYDDHKIVSGLR----DNTIKVWDRVSL--Q--CIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWD  300 (486)
Q Consensus       232 ~~~~~v~~~~~~~~~l~~~~~----dg~i~i~d~~~~--~--~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd  300 (486)
                      .....-+++++++++|.+...    +|.|..|++...  +  .+............++.  ++++|+++. .+|.|.+++
T Consensus        36 ~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~  115 (345)
T PF10282_consen   36 GENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFP  115 (345)
T ss_dssp             SSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEE
Confidence            344455677889999988877    568999887653  3  33333322333344555  788888876 489999999


Q ss_pred             CCC-CcEEEE---ec----------ccCccEEEEEEcCC--eEEEE-eCCCcEEEEECCCCCc-eeeEE-eeecCcccEE
Q psy9182         301 VNT-GEMVNT---LI----------HHCEAVLHLRFSNG--MMVTC-SKDRSIAVWDMVSPNE-ITLRR-VLVGHRAAVN  361 (486)
Q Consensus       301 ~~~-~~~~~~---~~----------~~~~~i~~~~~~~~--~l~~~-~~dg~i~i~d~~~~~~-~~~~~-~~~~~~~~v~  361 (486)
                      +.. +.....   +.          .......++.++|+  ++++. -....|.+|++..... +.... ..........
T Consensus       116 l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPR  195 (345)
T PF10282_consen  116 LDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPR  195 (345)
T ss_dssp             ECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEE
T ss_pred             ccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCc
Confidence            987 433222   11          12344677888865  55544 3556899999977652 22211 1223334445


Q ss_pred             EEEe--CCCEEEEEe-CCCcEEEEECC--Cce--EEEEEcCC----c--ccEEEE--EeCCCEEEEEe-CCCcEEEEECC
Q psy9182         362 VVDF--DEKYIVSAS-GDRTIKVWNTS--SCE--FVRTLNGH----K--RGIACL--QYRDRLVVSGS-SDNTIRLWDIE  425 (486)
Q Consensus       362 ~~~~--~~~~l~~~~-~d~~i~iwd~~--~~~--~~~~~~~~----~--~~v~~~--~~~~~~l~~~~-~dg~v~iwd~~  425 (486)
                      .+.|  +++++++.. .++.|.++++.  +++  .+..+...    .  .....+  +.++++|.++. .++.|.+|++.
T Consensus       196 h~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d  275 (345)
T PF10282_consen  196 HLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLD  275 (345)
T ss_dssp             EEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred             EEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence            5555  778776655 57789999987  443  23333311    1  133444  44688877765 56789999993


Q ss_pred             --CCe--eeEEecCcccCeEEEEe--cCCEEEEEe-CCCcEEEEeCCC
Q psy9182         426 --CGA--CLRVLEGHEELVRCIRF--DAKRIVSGA-YDGKIKVWNLVA  466 (486)
Q Consensus       426 --~~~--~~~~~~~h~~~v~~~~~--~~~~l~s~~-~dg~v~iwdl~~  466 (486)
                        +|+  .+..+.........+++  +|++|++++ .++.|.+|+++.
T Consensus       276 ~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~  323 (345)
T PF10282_consen  276 PATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDP  323 (345)
T ss_dssp             TTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET
T ss_pred             cCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeC
Confidence              233  33344333445788888  999988877 567899998864

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.93  E-value=1.6e-06  Score=83.94  Aligned_cols=186  Identities=13%  Similarity=0.054  Sum_probs=110.3

Q ss_pred             eEEEEeCCCEEEEEec---CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCc--EEEEECCCCcEEE
Q psy9182         237 VYCLQYDDHKIVSGLR---DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDST--VRVWDVNTGEMVN  308 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~--i~vwd~~~~~~~~  308 (486)
                      ...++|||+.|+..+.   +..|.+||+.+++.. .+..+.+.+.+..|  ||+.|+ +.+.+|.  |++||+.+++. .
T Consensus       206 ~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~  283 (435)
T PRK05137        206 TPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-T  283 (435)
T ss_pred             eeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-E
Confidence            3456778888777653   458999999887654 33344555555555  787765 5555554  77889987765 3


Q ss_pred             EecccCccEEEEEEcCC--eEEEEe-CCC--cEEEEECCCCCceeeEEeeecCcccEEEEE--eCCCEEEEEeCC---Cc
Q psy9182         309 TLIHHCEAVLHLRFSNG--MMVTCS-KDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVD--FDEKYIVSASGD---RT  378 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~~--~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d---~~  378 (486)
                      .+..+........|+++  .++..+ .+|  .|+++|+..++....    ..+...+....  .+|+.++....+   ..
T Consensus       284 ~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~l----t~~~~~~~~~~~SpdG~~ia~~~~~~~~~~  359 (435)
T PRK05137        284 RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRI----SFGGGRYSTPVWSPRGDLIAFTKQGGGQFS  359 (435)
T ss_pred             EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEe----ecCCCcccCeEECCCCCEEEEEEcCCCceE
Confidence            45545555666788764  565555 333  688888776543221    11222333334  488888876543   36


Q ss_pred             EEEEECCCceEEEEEc-CCcccEEEEEeCCCEEEEEeCC------CcEEEEECCCCee
Q psy9182         379 IKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSD------NTIRLWDIECGAC  429 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~  429 (486)
                      |.+||+.++.. ..+. .....-..++.+|+.|+..+.+      ..+.++|+..+..
T Consensus       360 i~~~d~~~~~~-~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~  416 (435)
T PRK05137        360 IGVMKPDGSGE-RILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE  416 (435)
T ss_pred             EEEEECCCCce-EeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence            88899865543 3332 2221222344467877665542      2577788765443

>KOG0309|consensus

Probab=98.93  E-value=1.1e-08  Score=97.13  Aligned_cols=212  Identities=21%  Similarity=0.368  Sum_probs=140.2

Q ss_pred             CeEEEEECCC---ceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCc-EEEEecccCccEEEEEEc--C
Q psy9182         254 NTIKVWDRVS---LQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGE-MVNTLIHHCEAVLHLRFS--N  324 (486)
Q Consensus       254 g~i~i~d~~~---~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~i~~~~~~--~  324 (486)
                      ..-.+|++..   ......+.+|...|+.+.|   +...+++++.|-.+..||+++.. ++.....-......+.|+  +
T Consensus        91 qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~  170 (1081)
T KOG0309|consen   91 QKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKD  170 (1081)
T ss_pred             chhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccC
Confidence            3344555432   2233456789999999999   45789999999999999998764 344444444555667775  3


Q ss_pred             CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCceEEEEE-cCCcccE
Q psy9182         325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---EKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGI  400 (486)
Q Consensus       325 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v  400 (486)
                      ..+++.+..+.|.+||++.+....  ..+.+|...+..+.|+   ...+.+.+.|++|+.||..+....... .....++
T Consensus       171 p~vlasshg~~i~vwd~r~gs~pl--~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~pi  248 (1081)
T KOG0309|consen  171 PNVLASSHGNDIFVWDLRKGSTPL--CSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPI  248 (1081)
T ss_pred             cchhhhccCCceEEEeccCCCcce--EEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcc
Confidence            456666778899999999887543  5566788888888883   457889999999999998753221111 0111111


Q ss_pred             -----------EEEEe--CCCEEEEEeCCCcEEEEECCC-CeeeEEecCcccCeEEEEe------cCC------EEEEEe
Q psy9182         401 -----------ACLQY--RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRF------DAK------RIVSGA  454 (486)
Q Consensus       401 -----------~~~~~--~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~h~~~v~~~~~------~~~------~l~s~~  454 (486)
                                 .++.+  .++.+.---.+.....|+..+ .+++..+.||.+.|..+.|      ++.      .|+|=+
T Consensus       249 w~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS  328 (1081)
T KOG0309|consen  249 WRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWS  328 (1081)
T ss_pred             eeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEee
Confidence                       12222  122222222233334444443 4678999999999988877      232      399999


Q ss_pred             CCCcEEEEeCCCC
Q psy9182         455 YDGKIKVWNLVAA  467 (486)
Q Consensus       455 ~dg~v~iwdl~~~  467 (486)
                      .|.++++|-+...
T Consensus       329 kD~~lrlWpI~~~  341 (1081)
T KOG0309|consen  329 KDQTLRLWPIDSQ  341 (1081)
T ss_pred             cCCceEeeeccHH
Confidence            9999999998764

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.92  E-value=7.5e-07  Score=85.83  Aligned_cols=204  Identities=14%  Similarity=0.127  Sum_probs=120.3

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC---CcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD---STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      ..|.++|.. +...+.+..+...+.+.+|  |++.|+..+.+   ..|.+||+.+++... +...........|+|+  .
T Consensus       176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~  253 (427)
T PRK02889        176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRT  253 (427)
T ss_pred             cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCE
Confidence            467777764 4444445556677777777  78888876643   359999999887643 3323345567888865  4


Q ss_pred             EE-EEeCCCcEEEEEC--CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CCcEEEE--ECCCceEEEE-EcCCc
Q psy9182         327 MV-TCSKDRSIAVWDM--VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DRTIKVW--NTSSCEFVRT-LNGHK  397 (486)
Q Consensus       327 l~-~~~~dg~i~i~d~--~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~i~iw--d~~~~~~~~~-~~~~~  397 (486)
                      ++ +.+.+|...+|.+  ..+..    ..+..+........|  ||+.++..+. ++...+|  ++.+++.... +.+..
T Consensus       254 la~~~~~~g~~~Iy~~d~~~~~~----~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~  329 (427)
T PRK02889        254 LAVALSRDGNSQIYTVNADGSGL----RRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSY  329 (427)
T ss_pred             EEEEEccCCCceEEEEECCCCCc----EECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCC
Confidence            54 5667777666654  43332    222223333334445  8888776554 4555555  4455443222 22222


Q ss_pred             ccEEEEEeCCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCC-c--EEEEeCC
Q psy9182         398 RGIACLQYRDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDG-K--IKVWNLV  465 (486)
Q Consensus       398 ~~v~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg-~--v~iwdl~  465 (486)
                      ..-..++++|++|+..+.++   .|.+||+.+++.......  .......|  ||+.|+.++.++ .  +.+-++.
T Consensus       330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~  403 (427)
T PRK02889        330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSSD  403 (427)
T ss_pred             cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC--CCccCceECCCCCEEEEEEecCCCEEEEEEECC
Confidence            22234556799988777654   699999988775433322  23355667  888887776544 2  4555554

>KOG2041|consensus

Probab=98.90  E-value=3.8e-07  Score=86.65  Aligned_cols=283  Identities=11%  Similarity=0.152  Sum_probs=174.4

Q ss_pred             ceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEE
Q psy9182         148 GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRI  227 (486)
Q Consensus       148 ~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (486)
                      ...|++|+               .+..+++.|+.||.+++-.+.+........+-..                ...+..-
T Consensus        16 kL~c~~WN---------------ke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa----------------~snLsmN   64 (1189)
T KOG2041|consen   16 KLHCAEWN---------------KESGYIACGGADGLLKVLKLGTDTTDLNKSGLAA----------------ASNLSMN   64 (1189)
T ss_pred             eEEEEEEc---------------ccCCeEEeccccceeEEEEccccCCccccccccc----------------ccccchh
Confidence            45778886               4667899999999999998866443222111000                0011111


Q ss_pred             eccCCCccceEEEEeC--CCEEEEEecCCeEEEEECCCceeeEEE--cCCcccEEEEEe--cCCEEEEEeCCCcEEEEEC
Q psy9182         228 NCRSENSKGVYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVL--TGHTGSVLCLQY--DERVIISGSSDSTVRVWDV  301 (486)
Q Consensus       228 ~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~  301 (486)
                      +...+|...+....++  .+.|-+...+|.|.+|-+-.+.-...+  ....+.|.+++|  ||..++....||.|.+=.+
T Consensus        65 QtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsv  144 (1189)
T KOG2041|consen   65 QTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSV  144 (1189)
T ss_pred             hhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEee
Confidence            2234566666666664  567899999999999987666433222  224456788998  8899999999998888776


Q ss_pred             CCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCce--------eeEEeeecCcccEEEEEe------
Q psy9182         302 NTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI--------TLRRVLVGHRAAVNVVDF------  365 (486)
Q Consensus       302 ~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~~~~v~~~~~------  365 (486)
                      ..++ +.--.-.......+.|+++  .++.+-.+|.+++||....-..        .....+......+..+.|      
T Consensus       145 dGNR-IwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~  223 (1189)
T KOG2041|consen  145 DGNR-IWGKELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQ  223 (1189)
T ss_pred             ccce-ecchhcchheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccc
Confidence            5333 2211111223446778766  6667778899999997653211        111112222333445555      


Q ss_pred             ----CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCC---------CcEEEEECCCCeee
Q psy9182         366 ----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD---------NTIRLWDIECGACL  430 (486)
Q Consensus       366 ----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d---------g~v~iwd~~~~~~~  430 (486)
                          +...++++-.+|.+.+..-.+......+.. .-.+....|+  |..|++++.|         +.|.+|..- |+.+
T Consensus       224 ~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dt-gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~-G~i~  301 (1189)
T KOG2041|consen  224 PVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDT-GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY-GHIV  301 (1189)
T ss_pred             cCCCCCCEEEEEEcCceehhhhhcCCCCCeEEec-ccEeecceecCCCcEEEEccCcccccCccccceEEEeccc-hhhe
Confidence                445788888888888765444332222221 1445566664  7788887754         356777644 8888


Q ss_pred             EEecCcccCeEEEEecCC--EEEEEeCCCcEEEEeCC
Q psy9182         431 RVLEGHEELVRCIRFDAK--RIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~~~~--~l~s~~~dg~v~iwdl~  465 (486)
                      ..++.....|++++|.|.  +++.+ .|+.|.+=+++
T Consensus       302 gtlkvpg~~It~lsWEg~gLriA~A-vdsfiyfanIR  337 (1189)
T KOG2041|consen  302 GTLKVPGSCITGLSWEGTGLRIAIA-VDSFIYFANIR  337 (1189)
T ss_pred             EEEecCCceeeeeEEcCCceEEEEE-ecceEEEEeec
Confidence            999988999999999443  33333 36666555554

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.90  E-value=2e-06  Score=78.79  Aligned_cols=280  Identities=14%  Similarity=0.158  Sum_probs=162.6

Q ss_pred             hhcccccccccccCCccCcceEEEeecC---------------ceeeecccccccceeeecCcccc--ee-EEEeeccee
Q psy9182          98 YLKPMLQRDFISLLPNFDEKYIVSASGD---------------RTIKVWNTSSCEFVRTLNGHKRG--IA-CLQYRDRLV  159 (486)
Q Consensus        98 ~~~~~~~~~~~~~~~s~~~~~l~tg~~d---------------g~v~iWd~~~~~~~~~l~~h~~~--V~-~~~~~~~~~  159 (486)
                      .+....+.++.-+.|+|.++||.|=+..               ..+.+||..+|..+..+.+-..+  .+ -+.|+    
T Consensus        65 ~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s----  140 (561)
T COG5354          65 KLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFS----  140 (561)
T ss_pred             heeeeecCCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeee----
Confidence            4445566788889999999999995433               35999999999999999876655  33 34453    


Q ss_pred             EecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE
Q psy9182         160 VSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC  239 (486)
Q Consensus       160 ~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  239 (486)
                                 .++.+++-. ....+.+.++ +......+..                           ........-+.
T Consensus       141 -----------~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~---------------------------~lr~~gi~dFs  180 (561)
T COG5354         141 -----------IDDKYVARV-VGSSLYIHEI-TDNIEEHPFK---------------------------NLRPVGILDFS  180 (561)
T ss_pred             -----------ecchhhhhh-ccCeEEEEec-CCccccCchh---------------------------hccccceeeEE
Confidence                       122222222 2345677775 2221110000                           00001111122


Q ss_pred             EEeC--CCEEEE-----EecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEE-----------eCCCcEEEE
Q psy9182         240 LQYD--DHKIVS-----GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG-----------SSDSTVRVW  299 (486)
Q Consensus       240 ~~~~--~~~l~~-----~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-----------~~dg~i~vw  299 (486)
                      ++|.  +..|+.     .+..+.+++|.+..+..+.+-.-....-..+.|  .|++++.-           .....++++
T Consensus       181 isP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~  260 (561)
T COG5354         181 ISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLL  260 (561)
T ss_pred             ecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEE
Confidence            2222  122222     356778899988766655432211111123444  34433321           112468888


Q ss_pred             ECCCCcEEEEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC
Q psy9182         300 DVNTGEMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG  375 (486)
Q Consensus       300 d~~~~~~~~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~  375 (486)
                      +++...+.... ...++|..++|.|.    -++.|..+-.+.++|++..  +  ..........-..+.+.+++++.++.
T Consensus       261 ~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l--~~~~Pe~~rNT~~fsp~~r~il~agF  335 (561)
T COG5354         261 RITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--L--RFYFPEQKRNTIFFSPHERYILFAGF  335 (561)
T ss_pred             eecccccceec-cccccceeeeecccCCceeEEecccccceeecccccc--e--EEecCCcccccccccCcccEEEEecC
Confidence            88744433332 55789999999753    3445567889999999875  1  12222222222234447888888765


Q ss_pred             C---CcEEEEECCCceEEE-EEcCCcccEEEEEeCCCEEEEEe------CCCcEEEEECCC
Q psy9182         376 D---RTIKVWNTSSCEFVR-TLNGHKRGIACLQYRDRLVVSGS------SDNTIRLWDIEC  426 (486)
Q Consensus       376 d---~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~~------~dg~v~iwd~~~  426 (486)
                      |   |.+.+||......+. .+.+........+.++.++.+..      .|..|.|||+..
T Consensus       336 ~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g  396 (561)
T COG5354         336 DNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG  396 (561)
T ss_pred             CccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence            4   679999987654444 77777766666677788776654      378899999863

>KOG2315|consensus

Probab=98.89  E-value=8.2e-07  Score=82.18  Aligned_cols=273  Identities=10%  Similarity=0.163  Sum_probs=165.7

Q ss_pred             cccccCCccCcceEEEe----------ecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         106 DFISLLPNFDEKYIVSA----------SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg----------~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      ....+.|+|-|.+|.|=          ...-.+++|+++++.....+......-++..|+                .+..
T Consensus        75 ~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs----------------~dEs  138 (566)
T KOG2315|consen   75 KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFS----------------IDES  138 (566)
T ss_pred             eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccc----------------cchh
Confidence            67788999999999881          113467899999966555554333232566664                2222


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC--CEEEE----
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD--HKIVS----  249 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~----  249 (486)
                      ++.--..+.+.+|+..+....                           .   ..........+.+++.+  ..+|+    
T Consensus       139 l~arlv~nev~f~~~~~f~~~---------------------------~---~kl~~~~i~~f~lSpgp~~~~vAvyvPe  188 (566)
T KOG2315|consen  139 LAARLVSNEVQFYDLGSFKTI---------------------------Q---HKLSVSGITMLSLSPGPEPPFVAVYVPE  188 (566)
T ss_pred             hhhhhhcceEEEEecCCccce---------------------------e---eeeeccceeeEEecCCCCCceEEEEccC
Confidence            333334567888886441100                           0   01112334445555542  33333    


Q ss_pred             -EecCCeEEEEECCCceeeEEEcC---CcccEEEEEec--C-CEEEEEeC-----------CCcEEEEECCCCcEEEEec
Q psy9182         250 -GLRDNTIKVWDRVSLQCIKVLTG---HTGSVLCLQYD--E-RVIISGSS-----------DSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       250 -~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~--~-~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~  311 (486)
                       ++.-+.|+||..........+..   ....-..+.|+  | .+|+.++.           ..++++.++........+ 
T Consensus       189 ~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-  267 (566)
T KOG2315|consen  189 KKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-  267 (566)
T ss_pred             CCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-
Confidence             34556899997663222111100   01111234442  2 23332222           246888888744444444 


Q ss_pred             ccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEE
Q psy9182         312 HHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVW  382 (486)
Q Consensus       312 ~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iw  382 (486)
                      ...++|.++.|+++    -++-|..--.+.|||++..-      .+.-..++-+++-|  .|++++.++.   .|.+.+|
T Consensus       268 ~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~------v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvw  341 (566)
T KOG2315|consen  268 LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKP------VFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVW  341 (566)
T ss_pred             CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCE------eEeCCCCCccceEECCCCCEEEEeecCCCCCceEEE
Confidence            34789999999875    34445667789999987542      11122344445555  7888888775   4789999


Q ss_pred             ECCCceEEEEEcCCcccEEEEEeCCCEEEEEeC------CCcEEEEECCCCeeeEE
Q psy9182         383 NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS------DNTIRLWDIECGACLRV  432 (486)
Q Consensus       383 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------dg~v~iwd~~~~~~~~~  432 (486)
                      |+.+.+++..+......+...+++|.++++++.      |+.++||+.. |..+..
T Consensus       342 Dv~n~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~  396 (566)
T KOG2315|consen  342 DVPNRKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHE  396 (566)
T ss_pred             eccchhhccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cceeeh
Confidence            999999999999888888888889999998875      7889999986 665543

>KOG4532|consensus

Probab=98.88  E-value=9.5e-07  Score=74.22  Aligned_cols=225  Identities=10%  Similarity=0.008  Sum_probs=145.4

Q ss_pred             CCCEEEEEecCCeEEEEECCCceee-EEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCI-KVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL  318 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~  318 (486)
                      .-.+|+.|+..|...+|...+.+.. +....|...|+-+.-   ....+..++.|.++++.++.-+..........-.+.
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~n  162 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQN  162 (344)
T ss_pred             cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecccccee
Confidence            3457999999999999998865433 333444444432221   234566778899999988875543333322223366


Q ss_pred             EEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE---
Q psy9182         319 HLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR---  391 (486)
Q Consensus       319 ~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~---  391 (486)
                      ++++++  .++++.+....|..|.+..................-.+.+|  ....+|++..||++.|||++......   
T Consensus       163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~  242 (344)
T KOG4532|consen  163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI  242 (344)
T ss_pred             eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence            777765  48888888999999998776544333223333334445555  66789999999999999998754332   


Q ss_pred             --EEcCCcccEEEEEeC----CCEEEEEeCCCcEEEEECCCCeeeEEecC-------cc-cCeEEEEe--cCCEEEEEeC
Q psy9182         392 --TLNGHKRGIACLQYR----DRLVVSGSSDNTIRLWDIECGACLRVLEG-------HE-ELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       392 --~~~~~~~~v~~~~~~----~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------h~-~~v~~~~~--~~~~l~s~~~  455 (486)
                        +-..|.+.+..+.|.    -.+|+..-.-+.+.+.|+++++..+.+..       |. ..|..-.|  ++..+.+.++
T Consensus       243 sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e  322 (344)
T KOG4532|consen  243 SSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNE  322 (344)
T ss_pred             cccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccc
Confidence              223578888888885    24566666678899999999876655432       22 23666667  4555555554


Q ss_pred             CCcEEEEeCCCCC
Q psy9182         456 DGKIKVWNLVAAL  468 (486)
Q Consensus       456 dg~v~iwdl~~~~  468 (486)
                      +. +.=|++.+..
T Consensus       323 ~~-~ae~ni~srs  334 (344)
T KOG4532|consen  323 LQ-GAEYNILSRS  334 (344)
T ss_pred             hh-hheeeccccc
Confidence            43 5567766543

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.87  E-value=6.3e-06  Score=75.62  Aligned_cols=323  Identities=12%  Similarity=0.144  Sum_probs=186.5

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec--ceeEecCCCCceeccCcceeecCCCCC
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~--~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      .+..+.+||.|.+|++.... .|.+|.-..+..+..+...  .|..+.|++  ++|.+-+....+  .......=-..++
T Consensus        34 p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~~~--~V~~~~fSP~~kYL~tw~~~pi~--~pe~e~sp~~~~n  108 (561)
T COG5354          34 PVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFRHP--DVKYLDFSPNEKYLVTWSREPII--EPEIEISPFTSKN  108 (561)
T ss_pred             chhheeecCcchheehhhcc-ceEEccccchhheeeeecC--CceecccCcccceeeeeccCCcc--ChhhccCCccccC
Confidence            35566889999999997665 6899998877766555432  677788864  355544433322  1111222223344


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~  263 (486)
                      .+.+||+.++..........                          .....-.++-++.+++++|-- ....+.|+++ +
T Consensus       109 ~~~vwd~~sg~iv~sf~~~~--------------------------q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t  160 (561)
T COG5354         109 NVFVWDIASGMIVFSFNGIS--------------------------QPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-T  160 (561)
T ss_pred             ceeEEeccCceeEeeccccC--------------------------Ccccccceeeeeecchhhhhh-ccCeEEEEec-C
Confidence            78899976554332221110                          000122356677777776654 3457999986 3


Q ss_pred             ceee----EEEcCCcccEEEEEe----cCCEEEE-----EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEE
Q psy9182         264 LQCI----KVLTGHTGSVLCLQY----DERVIIS-----GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMV  328 (486)
Q Consensus       264 ~~~~----~~~~~~~~~v~~~~~----~~~~l~~-----~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~  328 (486)
                      ....    +.++  ...|..+++    ++..|+.     .+..+.+++|.+..+..+.+-......-..+.|..  +.++
T Consensus       161 ~n~~~~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll  238 (561)
T COG5354         161 DNIEEHPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLL  238 (561)
T ss_pred             CccccCchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEE
Confidence            2221    1111  234555555    2233333     35678899999887666554333222233445542  2221


Q ss_pred             EE-----------eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEE--EeCCCcEEEEECCCceEEEEE
Q psy9182         329 TC-----------SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVS--ASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       329 ~~-----------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      +-           ..+..+++++++....    ....+..++|..+.|  .++.+++  |-.+..+.++|++.. ....+
T Consensus       239 ~l~~t~~ksnKsyfgesnLyl~~~~e~~i----~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~  313 (561)
T COG5354         239 VLVMTHTKSNKSYFGESNLYLLRITERSI----PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF  313 (561)
T ss_pred             EEEEEeeecccceeccceEEEEeeccccc----ceeccccccceeeeecccCCceeEEecccccceeecccccc-eEEec
Confidence            11           1235678888874332    222255788999999  4554444  457888999999865 55555


Q ss_pred             cCCcccEEEEEeCCCEEEEEeCC---CcEEEEECCCCeeeE-EecCcccCeEEEEecCCEEEEEe------CCCcEEEEe
Q psy9182         394 NGHKRGIACLQYRDRLVVSGSSD---NTIRLWDIECGACLR-VLEGHEELVRCIRFDAKRIVSGA------YDGKIKVWN  463 (486)
Q Consensus       394 ~~~~~~v~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~l~s~~------~dg~v~iwd  463 (486)
                      ......-..++.++++++.++-|   |.+.+||......+. .+.+..........|+.++.+..      .|..|+|||
T Consensus       314 Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~  393 (561)
T COG5354         314 PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWD  393 (561)
T ss_pred             CCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEE
Confidence            44444444455678888887755   789999988654443 56554433322223777766553      478899999


Q ss_pred             CCCCC
Q psy9182         464 LVAAL  468 (486)
Q Consensus       464 l~~~~  468 (486)
                      +....
T Consensus       394 v~g~~  398 (561)
T COG5354         394 VYGAK  398 (561)
T ss_pred             ecCch
Confidence            98654

>KOG2695|consensus

Probab=98.87  E-value=9.7e-09  Score=88.89  Aligned_cols=163  Identities=18%  Similarity=0.261  Sum_probs=120.0

Q ss_pred             cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCcee-eEEeeecCccc
Q psy9182         283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEIT-LRRVLVGHRAA  359 (486)
Q Consensus       283 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~  359 (486)
                      .+.. ++.+.+-.+-+-|+++|... .+. ..+.|.++.|.  ++.++.|+.+|.|..+|++....-. ......-|...
T Consensus       224 ~gyh-fs~G~sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ss  300 (425)
T KOG2695|consen  224 MGYH-FSVGLSQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSS  300 (425)
T ss_pred             ceee-ecccccceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcc
Confidence            3444 55556667889999887543 333 45667777775  5699999999999999998752211 01122347788


Q ss_pred             EEEEEe---CCCEEEEEeCCCcEEEEECCCceE---EEEEcCCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCCee
Q psy9182         360 VNVVDF---DEKYIVSASGDRTIKVWNTSSCEF---VRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       360 v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      |+++..   ++++|++.+.+|+|.+||.+.-++   +.++++|...-.-+.+    .+..+++++.|...+||.++.|.+
T Consensus       301 vtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghL  380 (425)
T KOG2695|consen  301 VTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHL  380 (425)
T ss_pred             hhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCce
Confidence            887765   789999999999999999987666   8999999876554444    367888899999999999999999


Q ss_pred             eEEecCc----ccCeEEEEecCC
Q psy9182         430 LRVLEGH----EELVRCIRFDAK  448 (486)
Q Consensus       430 ~~~~~~h----~~~v~~~~~~~~  448 (486)
                      +.++.-.    +..+.+++|+++
T Consensus       381 l~tipf~~s~~e~d~~sv~~~sr  403 (425)
T KOG2695|consen  381 LCTIPFPYSASEVDIPSVAFDSR  403 (425)
T ss_pred             eeccCCCCccccccccceehhcc
Confidence            9887543    335667777443

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.85  E-value=3.7e-06  Score=81.39  Aligned_cols=196  Identities=16%  Similarity=0.079  Sum_probs=113.6

Q ss_pred             EEEeCCCEEEEEecC---CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEE-EeCCC--cEEEEECCCCcEEEEe
Q psy9182         239 CLQYDDHKIVSGLRD---NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS-GSSDS--TVRVWDVNTGEMVNTL  310 (486)
Q Consensus       239 ~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~dg--~i~vwd~~~~~~~~~~  310 (486)
                      .+++++++++.+..+   ..|++||+.+++..... .+.+.+.++.|  |++.|+. .+.++  .|++||+.+++.. .+
T Consensus       196 ~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~-~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l  273 (417)
T TIGR02800       196 AWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVA-SFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RL  273 (417)
T ss_pred             cCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEee-cCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-EC
Confidence            467788888876644   47999999887654332 34444555556  7776654 44444  5899999877643 33


Q ss_pred             cccCccEEEEEEcCC--eEEEEeC-CC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC---cEE
Q psy9182         311 IHHCEAVLHLRFSNG--MMVTCSK-DR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR---TIK  380 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~--~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~---~i~  380 (486)
                      ..+........|+++  .++..+. ++  .|+++|+.+++...    +..+........+  ++++++.++.++   .|.
T Consensus       274 ~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~----l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~  349 (417)
T TIGR02800       274 TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR----LTFRGGYNASPSWSPDGDLIAFVHREGGGFNIA  349 (417)
T ss_pred             CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE----eecCCCCccCeEECCCCCEEEEEEccCCceEEE
Confidence            333333445567653  5655543 33  57788877655321    1222233334444  888888887765   799


Q ss_pred             EEECCCceEEEEEcCCc-ccEEEEEeCCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEE
Q psy9182         381 VWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRC  442 (486)
Q Consensus       381 iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~  442 (486)
                      +||+.++... .+.... ..-..++.+++.|+..+.++   .+++.+.. +.....+..+.+.+..
T Consensus       350 ~~d~~~~~~~-~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~g~~~~  413 (417)
T TIGR02800       350 VMDLDGGGER-VLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD-GRFRARLPLGNGDVRE  413 (417)
T ss_pred             EEeCCCCCeE-EccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC-CceeeECCCCCCCcCC
Confidence            9999876543 232221 11124555788777776653   35555543 5545555444333433

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.85  E-value=5.5e-06  Score=81.13  Aligned_cols=221  Identities=14%  Similarity=0.184  Sum_probs=144.2

Q ss_pred             CEEEEEecCCeEEEEECCCceeeEEEcCCccc-----E-EEEEecCCEEEEEe---------CCCcEEEEECCCCcEEEE
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-----V-LCLQYDERVIISGS---------SDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----v-~~~~~~~~~l~~~~---------~dg~i~vwd~~~~~~~~~  309 (486)
                      ..++.++.+|.|..+|.++|+.+..+......     + .+..+.+..++.++         .+|.+..+|..+|+.+..
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~  190 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR  190 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence            78888999999999999999999887643321     1 11223445566654         367899999999998887


Q ss_pred             ecccCc--------------------cE-EEEEEc--CCeEEEEeCCC------------------cEEEEECCCCCcee
Q psy9182         310 LIHHCE--------------------AV-LHLRFS--NGMMVTCSKDR------------------SIAVWDMVSPNEIT  348 (486)
Q Consensus       310 ~~~~~~--------------------~i-~~~~~~--~~~l~~~~~dg------------------~i~i~d~~~~~~~~  348 (486)
                      +.....                    .+ ....+.  .+.+++++.++                  .|.-+|..+++..-
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W  270 (488)
T cd00216         191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW  270 (488)
T ss_pred             eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence            654211                    01 112332  46788887665                  69999999988654


Q ss_pred             eEEeeecCc--------cc-EEEEE-eCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEE--
Q psy9182         349 LRRVLVGHR--------AA-VNVVD-FDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG--  413 (486)
Q Consensus       349 ~~~~~~~~~--------~~-v~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~--  413 (486)
                      ..+. ..+.        .+ +..+. .++.   .++.++.+|.+...|.++|+.+.........   +..++..+..+  
T Consensus       271 ~~~~-~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~---~~~~~~~vyv~~~  346 (488)
T cd00216         271 FYQT-TPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQP---MAYDPGLVYLGAF  346 (488)
T ss_pred             EeeC-CCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeeccc---cccCCceEEEccc
Confidence            3322 1111        11 11111 2443   6788889999999999999988776532111   12222333332  


Q ss_pred             ----------------eCCCcEEEEECCCCeeeEEecCcc--------cCe--EEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         414 ----------------SSDNTIRLWDIECGACLRVLEGHE--------ELV--RCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       414 ----------------~~dg~v~iwd~~~~~~~~~~~~h~--------~~v--~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                                      ..+|.|.-.|+.+|+.+.......        .+.  ..+...+..|+.++.||.|+.+|..++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG  426 (488)
T cd00216         347 HIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTG  426 (488)
T ss_pred             cccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCC
Confidence                            246889999999999887765431        111  234557788999999999999999887


Q ss_pred             CC
Q psy9182         468 LD  469 (486)
Q Consensus       468 ~~  469 (486)
                      ..
T Consensus       427 ~~  428 (488)
T cd00216         427 KE  428 (488)
T ss_pred             ce
Confidence            64

The alignment model contains an 8-bladed beta-propeller.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.82  E-value=4.1e-06  Score=81.05  Aligned_cols=204  Identities=18%  Similarity=0.139  Sum_probs=122.7

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC---CcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD---STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      ..|.++|..... .+.+..+...+....|  |++.|+.+..+   ..|++||+.+++.... ..+...+..+.|+++  .
T Consensus       170 ~~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~~~spDg~~  247 (417)
T TIGR02800       170 YELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAPAFSPDGSK  247 (417)
T ss_pred             ceEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccceEECCCCCE
Confidence            367888875443 3444445556766666  88888877654   4799999998865433 233445566788764  4


Q ss_pred             EE-EEeCCC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC-C--cEEEEECCCceEEEEEcCCcc
Q psy9182         327 MV-TCSKDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD-R--TIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       327 l~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      ++ +.+.++  .|++||+.++....    +..+........|  +++.|+..+.. +  .|+++|+.+++.. .+..+..
T Consensus       248 l~~~~~~~~~~~i~~~d~~~~~~~~----l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~  322 (417)
T TIGR02800       248 LAVSLSKDGNPDIYVMDLDGKQLTR----LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGG  322 (417)
T ss_pred             EEEEECCCCCccEEEEECCCCCEEE----CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCC
Confidence            54 444444  58889988765322    2222222223344  88887766543 3  5888898876643 3333333


Q ss_pred             cEEEEE--eCCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCC---cEEEEeCCC
Q psy9182         399 GIACLQ--YRDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDG---KIKVWNLVA  466 (486)
Q Consensus       399 ~v~~~~--~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg---~v~iwdl~~  466 (486)
                      ......  .++++++.++.++   .|.+||+.++... .+.... ......|  |+++|+.++.++   .+.+.+...
T Consensus       323 ~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~-~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g  398 (417)
T TIGR02800       323 YNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDTG-LDESPSFAPNGRMILYATTRGGRGVLGLVSTDG  398 (417)
T ss_pred             CccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCCC-CCCCceECCCCCEEEEEEeCCCcEEEEEEECCC
Confidence            444444  4688888888776   7999999876543 332221 2233445  888887777654   355556544

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG3914|consensus

Probab=98.81  E-value=1.6e-07  Score=83.32  Aligned_cols=150  Identities=16%  Similarity=0.335  Sum_probs=102.7

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCce----eeEEEcCCcccEEEEEe--cCCEEEEEeC---CCcEEEEECCCCcEEEEec
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQ----CIKVLTGHTGSVLCLQY--DERVIISGSS---DSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~  311 (486)
                      ++.++++|++..+....+++.....    +...... ...-+++.+  +...+..+..   ...+.+|....+. ...+.
T Consensus        71 s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v-~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~-~~~~l  148 (390)
T KOG3914|consen   71 SDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCV-PKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR-CEPIL  148 (390)
T ss_pred             CCCceEEEEEeCCCceEEEEEecCCCcceeeeEeec-ccCcceeeeeeccceEEEEeecCCceeeeeecccccC-cchhh
Confidence            4567888888888877677654433    2222221 112233333  3333333333   3445555554433 34456


Q ss_pred             ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCce
Q psy9182         312 HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       312 ~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      +|-..+..++++++  .++++..|..|++-.......+.  ....||..-|..++. ++..|++++.|++|++||+.+|+
T Consensus       149 GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ie--sfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk  226 (390)
T KOG3914|consen  149 GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIE--SFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGK  226 (390)
T ss_pred             hhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchh--hhccccHhheeeeeeccCceeeecCCCCcEEEEecccCC
Confidence            78889999999865  89999999999998776544332  456689999999999 77788999999999999999999


Q ss_pred             EEEEEc
Q psy9182         389 FVRTLN  394 (486)
Q Consensus       389 ~~~~~~  394 (486)
                      .+.++.
T Consensus       227 ~L~t~d  232 (390)
T KOG3914|consen  227 LLDTCD  232 (390)
T ss_pred             cccccc
Confidence            887665

>KOG1275|consensus

Probab=98.81  E-value=1.7e-07  Score=91.40  Aligned_cols=180  Identities=16%  Similarity=0.239  Sum_probs=138.2

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF  322 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~  322 (486)
                      ++..++.|+....+..+|+.+.+..+......+.|+-+..+++.+++|...|+|.+-|.++.+.++++..|.+.+.++..
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv  225 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV  225 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence            56778888888899999999998888777666668888889999999999999999999999999999999999999999


Q ss_pred             cCCeEEEEeC---------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECC---Cc-e
Q psy9182         323 SNGMMVTCSK---------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS---SC-E  388 (486)
Q Consensus       323 ~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~---~~-~  388 (486)
                      .++.|++++.         |..|++||++.-+.+.......+.  ....+.+ -...+++++..|...+-|..   +. .
T Consensus       226 ~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P--~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~  303 (1118)
T KOG1275|consen  226 QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP--QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPA  303 (1118)
T ss_pred             cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc--hhhhhcccccceEEEEecccceeeccccccCCCcc
Confidence            9999998875         456899999987765544432221  1111222 34567888888999999843   32 1


Q ss_pred             EEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         389 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~  424 (486)
                      -+..+......+..+.+  +++.++.|..+|.|.+|.-
T Consensus       304 ~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  304 GVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             ceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            22333333444655555  5899999999999999973

>KOG3914|consensus

Probab=98.80  E-value=3.6e-07  Score=81.12  Aligned_cols=167  Identities=19%  Similarity=0.231  Sum_probs=104.4

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .....+.++++++||.+..+....+.+.........+-    .+.++.-.+..+.....+.++.+     ....+....+
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~----~~~~v~~~~~ai~~~~~~~sv~v-----~dkagD~~~~  134 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLL----DVSCVPKRPTAISFIREDTSVLV-----ADKAGDVYSF  134 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceee----eEeecccCcceeeeeeccceEEE-----EeecCCceee
Confidence            34455678899999999999888888876544311110    12222222222222222222111     2223334445


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ  265 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  265 (486)
                      .+|...........                              .+.....-+++++|++.++++..|..|+|-....--
T Consensus       135 di~s~~~~~~~~~l------------------------------GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f  184 (390)
T KOG3914|consen  135 DILSADSGRCEPIL------------------------------GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF  184 (390)
T ss_pred             eeecccccCcchhh------------------------------hhhhhhheeeecCCCCEEEEecCCceEEEEecCccc
Confidence            55554321111111                              011223446788999999999999999998877655


Q ss_pred             eeEEE-cCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEec
Q psy9182         266 CIKVL-TGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       266 ~~~~~-~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  311 (486)
                      .+..+ -||..-|..++. ++..|++|+.|++|++||+++|+.+.++.
T Consensus       185 ~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  185 VIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             chhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCcccccc
Confidence            55554 479999999998 77788999999999999999999887664

>KOG4714|consensus

Probab=98.79  E-value=1.1e-07  Score=79.29  Aligned_cols=148  Identities=17%  Similarity=0.261  Sum_probs=92.7

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceee-EEEcC-CcccE-EEEEecCCEEEEEe-----CCCcEEEEECCCCcEEE
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCI-KVLTG-HTGSV-LCLQYDERVIISGS-----SDSTVRVWDVNTGEMVN  308 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~v-~~~~~~~~~l~~~~-----~dg~i~vwd~~~~~~~~  308 (486)
                      ....+..+..++++..||.+.+++.+....+ ..+.. |.+.. .++.-.++.+.++.     .-+..+.|+++..+...
T Consensus        94 ~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~  173 (319)
T KOG4714|consen   94 NDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLI  173 (319)
T ss_pred             cccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccc
Confidence            3344456678999999999999987652111 11110 11110 11111344444332     12345556654332222


Q ss_pred             EecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEE
Q psy9182         309 TLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iw  382 (486)
                      .-......|.+++-+|   +.+++|+.||.+.+||.++...+  ...+..|+..+..+.|   ++..|++++.||.+--|
T Consensus       174 ~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p--~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~w  251 (319)
T KOG4714|consen  174 PSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP--VSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHW  251 (319)
T ss_pred             ccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccch--HHHHHHhhhhhhheeccCCCchheeEecCCCcEEEE
Confidence            1122223477777665   38889999999999999987433  3556789999999999   78899999999999999


Q ss_pred             ECCC
Q psy9182         383 NTSS  386 (486)
Q Consensus       383 d~~~  386 (486)
                      |..+
T Consensus       252 das~  255 (319)
T KOG4714|consen  252 DAST  255 (319)
T ss_pred             cCCC
Confidence            9775

>KOG4649|consensus

Probab=98.79  E-value=2e-05  Score=66.27  Aligned_cols=297  Identities=13%  Similarity=0.106  Sum_probs=150.3

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSE  195 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~  195 (486)
                      ..+++.|+..+.+.--|..+|+++..-.- ...|.+-+.     +           -++.++.|...|.+.+-++.++..
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~-----v-----------vgdfVV~GCy~g~lYfl~~~tGs~   85 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAI-----V-----------VGDFVVLGCYSGGLYFLCVKTGSQ   85 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeE-----E-----------ECCEEEEEEccCcEEEEEecchhh
Confidence            56788899999999999999987654211 012222221     0           123366666667776666655432


Q ss_pred             cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcc
Q psy9182         196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG  275 (486)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  275 (486)
                      ......                            . +....-..+.+++..+..|+.|++.+..|.++..++...+...+
T Consensus        86 ~w~f~~----------------------------~-~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~  136 (354)
T KOG4649|consen   86 IWNFVI----------------------------L-ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGG  136 (354)
T ss_pred             eeeeee----------------------------h-hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCc
Confidence            111100                            0 11111123567999999999999999999999998887663322


Q ss_pred             cE--EEEEecCCEEEEEeCCCcEEEEECCCCc--EEEEecccCccEEEE-EEcCCeEEEEeCCCcEE--------EEECC
Q psy9182         276 SV--LCLQYDERVIISGSSDSTVRVWDVNTGE--MVNTLIHHCEAVLHL-RFSNGMMVTCSKDRSIA--------VWDMV  342 (486)
Q Consensus       276 ~v--~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~-~~~~~~l~~~~~dg~i~--------i~d~~  342 (486)
                      ..  -+++.....|..+...|.+.--..++..  ....... ..++..- .+-...+..++-||.+.        +|..+
T Consensus       137 ~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~-~~PiF~splcv~~sv~i~~VdG~l~~f~~sG~qvwr~~  215 (354)
T KOG4649|consen  137 TFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATR-FGPIFASPLCVGSSVIITTVDGVLTSFDESGRQVWRPA  215 (354)
T ss_pred             eeccceecCCCceEEEEeccceEEEEccCCCCcceehhhhc-CCccccCceeccceEEEEEeccEEEEEcCCCcEEEeec
Confidence            21  2344433445555556666555555442  1111111 1122111 11122333344444444        44444


Q ss_pred             CCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEc-------CCcccEEEEEeCCCEEEEEe
Q psy9182         343 SPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN-------GHKRGIACLQYRDRLVVSGS  414 (486)
Q Consensus       343 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~l~~~~  414 (486)
                      ++..+... ....|. ....+.+ +.+-+.+...-.--.+|..++|...+..-       .|...+.    .+++|..++
T Consensus       216 t~GpIf~~-Pc~s~P-s~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~l~F~~h~~~~S----~~~ll~~~s  289 (354)
T KOG4649|consen  216 TKGPIFME-PCESRP-SCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSPKLRFDLHSPGIS----YPKLLRRSS  289 (354)
T ss_pred             CCCceecc-cccCCC-cceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCcccceeccCCCCc----chhhhhhhc
Confidence            43332110 001111 1122222 22223332222234466666654333221       2221111    156788888


Q ss_pred             CCCcEEEEECCCCeeeEEecCcccCeEEEE---e----------cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         415 SDNTIRLWDIECGACLRVLEGHEELVRCIR---F----------DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       415 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~---~----------~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .||.+.|.-.+  +.+.....|.+.+..+.   .          -+.+|+.|+.|..|+-||+++.
T Consensus       290 ~dgkv~il~~~--~sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cldl~~~  353 (354)
T KOG4649|consen  290 GDGKVMILMTS--KSLAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLDLDTW  353 (354)
T ss_pred             CCCcEEEEEec--ccccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeEEEEecccc
Confidence            99988887443  22444444443333222   1          2356888999999999999864

>KOG2314|consensus

Probab=98.77  E-value=1.1e-05  Score=74.83  Aligned_cols=319  Identities=11%  Similarity=0.192  Sum_probs=182.0

Q ss_pred             cccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec--ceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       108 ~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~--~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      +-+.+||-|.||+|--.- -|.+|--.+...++.|. |. .|.-+.|+|  ++|++-+..-...-++      -.....+
T Consensus       214 tyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~------d~e~~~l  284 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEED------DNEGQQL  284 (698)
T ss_pred             eeEEecCCceEEEEEecc-ceeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcc------cCCCceE
Confidence            355678999999997655 47889766666566554 44 677888864  4666655443332222      1123568


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ  265 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  265 (486)
                      +|||+.++..........                          .....-.++.++.|++++|.-.. ..|.||+..+..
T Consensus       285 ~IWDI~tG~lkrsF~~~~--------------------------~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~  337 (698)
T KOG2314|consen  285 IIWDIATGLLKRSFPVIK--------------------------SPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFM  337 (698)
T ss_pred             EEEEccccchhcceeccC--------------------------CCccccceEEeccCCceeEEecc-ceEEEEecCcee
Confidence            999998876543322110                          11223356778999999988776 479999987755


Q ss_pred             eeEEEcCCcccEEEEEec--CCEEEEEeC-----CCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEEEE------
Q psy9182         266 CIKVLTGHTGSVLCLQYD--ERVIISGSS-----DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTC------  330 (486)
Q Consensus       266 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~------  330 (486)
                      ++..-.-.-..|..++|.  ++.||--..     -..+.+-.+.+++.+++-..+.-.=..+.|.  +++|..-      
T Consensus       338 lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK  417 (698)
T KOG2314|consen  338 LLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTK  417 (698)
T ss_pred             eecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeecc
Confidence            443322234556666773  344433221     1234455555555554443332222334443  3343321      


Q ss_pred             ----eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCC----ceEEEEEcCCc
Q psy9182         331 ----SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNTSS----CEFVRTLNGHK  397 (486)
Q Consensus       331 ----~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~~~----~~~~~~~~~~~  397 (486)
                          +.-..+.|+.++......   ....-...|..++|  .|+.+++-+.   ..++.+|.+++    .+++..+... 
T Consensus       418 ~~~~g~f~n~eIfrireKdIpv---e~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~-  493 (698)
T KOG2314|consen  418 SKVKGQFSNLEIFRIREKDIPV---EVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKK-  493 (698)
T ss_pred             ccccceEeeEEEEEeeccCCCc---eeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhccc-
Confidence                111235566665544321   12234567777888  5665554432   35688888773    2344444442 


Q ss_pred             ccEEEEEe--CCCEEEEEe---CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC------CCcEEEEeC
Q psy9182         398 RGIACLQY--RDRLVVSGS---SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY------DGKIKVWNL  464 (486)
Q Consensus       398 ~~v~~~~~--~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~------dg~v~iwdl  464 (486)
                       ..+.+.|  .|++++.+.   ..|.+.++|+....+...-.......+.+.|  .|+|+++++.      |.--++|++
T Consensus       494 -~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tf  572 (698)
T KOG2314|consen  494 -FANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTF  572 (698)
T ss_pred             -ccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEe
Confidence             2344444  588877654   4788999998753333322222345677888  7889998875      455678888


Q ss_pred             CCC
Q psy9182         465 VAA  467 (486)
Q Consensus       465 ~~~  467 (486)
                      +..
T Consensus       573 qGr  575 (698)
T KOG2314|consen  573 QGR  575 (698)
T ss_pred             ecH
Confidence            764

>KOG2314|consensus

Probab=98.76  E-value=4.4e-07  Score=83.73  Aligned_cols=322  Identities=12%  Similarity=0.189  Sum_probs=169.3

Q ss_pred             CccchhhhhHHHHHhccCChhhHHHHHHHH-HHhhccCCchhhhhhhcccccccccccCCccCcceEEEee---------
Q psy9182          54 APQFASEKEMCFKYFDKWSEQDQIDFVENL-LSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSAS---------  123 (486)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~tg~---------  123 (486)
                      .+....+.++|...+-.|++.--  ++... .+.+. .=-+.....++...+..+--+.|||..+||+|-+         
T Consensus       201 ~p~~ie~RenWTetyv~wSP~GT--YL~t~Hk~GI~-lWGG~~f~r~~RF~Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~  277 (698)
T KOG2314|consen  201 EPSLIEERENWTETYVRWSPKGT--YLVTFHKQGIA-LWGGESFDRIQRFYHPGVQFIDFSPNEKYLVTYSPEPIIVEED  277 (698)
T ss_pred             chhhhhhhhcceeeeEEecCCce--EEEEEecccee-eecCccHHHHHhccCCCceeeecCCccceEEEecCCccccCcc
Confidence            44455677888888888887531  00000 00000 0001222334455566777889999999999943         


Q ss_pred             --cCceeeecccccccceeeecCcc--cceeE-EEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccccccc
Q psy9182         124 --GDRTIKVWNTSSCEFVRTLNGHK--RGIAC-LQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPI  198 (486)
Q Consensus       124 --~dg~v~iWd~~~~~~~~~l~~h~--~~V~~-~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~  198 (486)
                        ....++|||+.+|.+.+.|....  ..++. +.|+               .|+++++--.. .+|.|++........ 
T Consensus       278 d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS---------------~DdKy~Arm~~-~sisIyEtpsf~lld-  340 (698)
T KOG2314|consen  278 DNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWS---------------HDDKYFARMTG-NSISIYETPSFMLLD-  340 (698)
T ss_pred             cCCCceEEEEEccccchhcceeccCCCccccceEEec---------------cCCceeEEecc-ceEEEEecCceeeec-
Confidence              23689999999999998887532  22222 2333               24444443333 456677642211000 


Q ss_pred             CCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-----CCeEEEEECCCceeeEEEcCC
Q psy9182         199 QGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-----DNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~  273 (486)
                                                  .....-....-+.++|.+..||--..     -..+.+..+.+++.+++..-+
T Consensus       341 ----------------------------~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlf  392 (698)
T KOG2314|consen  341 ----------------------------KKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLF  392 (698)
T ss_pred             ----------------------------ccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccce
Confidence                                        00001111222334444444443221     124556666666666655444


Q ss_pred             cccEEEEEe--cCCEEEEE----------eCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEe---CCCcE
Q psy9182         274 TGSVLCLQY--DERVIISG----------SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCS---KDRSI  336 (486)
Q Consensus       274 ~~~v~~~~~--~~~~l~~~----------~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~---~dg~i  336 (486)
                      .-.-..+.|  +|.+|+.-          +.-..+.|+.++..........-...|..++|.|  +.+++-+   ...++
T Consensus       393 nVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tv  472 (698)
T KOG2314|consen  393 NVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTV  472 (698)
T ss_pred             eeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccce
Confidence            433334555  56666542          1112355666655443222233456788888875  3444333   24578


Q ss_pred             EEEECCC-CCceeeEEeeecCcccEEEEEe--CCCEEEEEe---CCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CC
Q psy9182         337 AVWDMVS-PNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS---GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR  408 (486)
Q Consensus       337 ~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~  408 (486)
                      .+|.+.+ .....+...+..  ...+.+.|  .|++++.+.   ..|.+..+|+....+...-.......+.+.|+  |+
T Consensus       473 sfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGR  550 (698)
T KOG2314|consen  473 SFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGR  550 (698)
T ss_pred             eEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCC
Confidence            8888873 333333333322  33344444  788877664   57889999987533333322333345667775  89


Q ss_pred             EEEEEeCC------CcEEEEECC
Q psy9182         409 LVVSGSSD------NTIRLWDIE  425 (486)
Q Consensus       409 ~l~~~~~d------g~v~iwd~~  425 (486)
                      |+++++.-      .--++|+.+
T Consensus       551 YvvT~ss~wrhk~d~GYri~tfq  573 (698)
T KOG2314|consen  551 YVVTSSSSWRHKVDNGYRIFTFQ  573 (698)
T ss_pred             EEEEeeehhhhccccceEEEEee
Confidence            99998864      334555554

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.75  E-value=3e-05  Score=80.88  Aligned_cols=327  Identities=13%  Similarity=0.158  Sum_probs=175.7

Q ss_pred             cccccccCCccCcceEEEeecCceeeec----ccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVW----NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iW----d~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ...++++.+-++..-++.+..+|.|.+.    |..+.. +.....-..+|.+++|+               ||+..|+..
T Consensus        75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WS---------------PD~Ella~v  138 (928)
T PF04762_consen   75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWS---------------PDEELLALV  138 (928)
T ss_pred             CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEEC---------------CCcCEEEEE
Confidence            3567888888888889999999999999    554332 22222234589999998               566666666


Q ss_pred             CCCCcceeee----cccccccccCCCCCCCCCCCCcccccccccC---------ce--------eE-----EEEeccCCC
Q psy9182         180 SHDDTILIWD----FLNYSETPIQGGGGGGPPPSGPSIENNWRMG---------KF--------LL-----QRINCRSEN  233 (486)
Q Consensus       180 s~dg~i~vWd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--------~~-----~~~~~~~~~  233 (486)
                      +.++++.+-+    .-..........+.      ...+...|..+         +.        ..     ..+.  ...
T Consensus       139 T~~~~l~~mt~~fd~i~E~~l~~~~~~~------~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s--~dd  210 (928)
T PF04762_consen  139 TGEGNLLLMTRDFDPISEVPLDSDDFGE------SKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS--WDD  210 (928)
T ss_pred             eCCCEEEEEeccceEEEEeecCccccCC------CceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc--cCC
Confidence            6666665532    21110000000000      00000011000         00        00     0000  122


Q ss_pred             ccceEEEEeCCCEEEEEec---C---CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC---CCcEEEEECC
Q psy9182         234 SKGVYCLQYDDHKIVSGLR---D---NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS---DSTVRVWDVN  302 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~---d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~vwd~~  302 (486)
                      ...-+++.-||.++|+.+.   .   ..++||+-+ |+...+-..-.+--.+++|  .|+++++...   ...|.+|. +
T Consensus       211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-r  288 (928)
T PF04762_consen  211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-R  288 (928)
T ss_pred             CceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-c
Confidence            3344556669999998875   3   479999865 6654443333333346677  7888888765   34577777 3


Q ss_pred             CCcEEEEec----ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeee-cCcccEEEEEe---CCCEEEE
Q psy9182         303 TGEMVNTLI----HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLV-GHRAAVNVVDF---DEKYIVS  372 (486)
Q Consensus       303 ~~~~~~~~~----~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~---~~~~l~~  372 (486)
                      +|..-..+.    .....|..+.|+.+  .|++...| .|.+|-..+-.-. +.+.+. .....+..+.|   +...|..
T Consensus       289 NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NYHWY-LKqei~~~~~~~~~~~~Wdpe~p~~L~v  366 (928)
T PF04762_consen  289 NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED-RVQLWTRSNYHWY-LKQEIRFSSSESVNFVKWDPEKPLRLHV  366 (928)
T ss_pred             CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC-CceEEEeeCCEEE-EEEEEEccCCCCCCceEECCCCCCEEEE
Confidence            454444432    34567899999864  66665544 4999987665422 222222 22233444777   4456777


Q ss_pred             EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCe-----eeEEecCcccCeEEEEe--
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA-----CLRVLEGHEELVRCIRF--  445 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~h~~~v~~~~~--  445 (486)
                      .+.+|.+..++..-....  -.+..       .++.-++..-+...+.+-.++..-     ....+. -..+|.+++|  
T Consensus       367 ~t~~g~~~~~~~~~~v~~--s~~~~-------~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~vaf~~  436 (928)
T PF04762_consen  367 LTSNGQYEIYDFAWDVSR--SPGSS-------PNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVAFSP  436 (928)
T ss_pred             EecCCcEEEEEEEEEEEe--cCCCC-------ccCceEEEEEeCCeEEEecccccCCCchHhceEEc-CCCCcEEEEEeC
Confidence            766677766654311100  00000       001111111122234444444321     112332 2468999999  


Q ss_pred             cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         446 DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++..+++-..||.|.+|......
T Consensus       437 ~~~~~avl~~d~~l~~~~~~~~~  459 (928)
T PF04762_consen  437 SNSRFAVLTSDGSLSIYEWDLKN  459 (928)
T ss_pred             CCCeEEEEECCCCEEEEEecCCC
Confidence            55569999999999999976543

>KOG1275|consensus

Probab=98.74  E-value=3.7e-07  Score=89.09  Aligned_cols=177  Identities=14%  Similarity=0.227  Sum_probs=139.6

Q ss_pred             cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEE
Q psy9182         283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV  362 (486)
Q Consensus       283 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~  362 (486)
                      ++..++.|+....+..+|+++.+..+...-....+.-+..++..+.+|...|+|.+-|.++.+.+   ..+..|.+.+..
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~i---ht~~aHs~siSD  222 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETI---HTFDAHSGSISD  222 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCcee---eeeeccccceee
Confidence            67788888888889999999988887776666678889999999999999999999998877644   778899999999


Q ss_pred             EEeCCCEEEEEeC---------CCcEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCC---C
Q psy9182         363 VDFDEKYIVSASG---------DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC---G  427 (486)
Q Consensus       363 ~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~---~  427 (486)
                      +...|+.|++++.         |..|+|||++..+.+..+.-+.++ .-+.+.   ...+++++..|...+-|..+   .
T Consensus       223 fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP  301 (1118)
T KOG1275|consen  223 FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNP  301 (1118)
T ss_pred             eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCCC
Confidence            9999999999984         556899999988777666655444 222222   56788899999999999432   2


Q ss_pred             -eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         428 -ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       428 -~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                       ..+..+......+.++.+  +++.++.|..+|.|.+|.
T Consensus       302 ~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  302 PAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             ccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence             122333334455777777  889999999999999998

>KOG2066|consensus

Probab=98.72  E-value=9.7e-07  Score=85.24  Aligned_cols=181  Identities=13%  Similarity=0.164  Sum_probs=130.7

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      ..+.|....++.++.|+.+|.|++++.... . .+...|...    ..+|.++++|+.||+|.|-.+-+.+...++.. .
T Consensus        40 D~is~~av~~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df-~  112 (846)
T KOG2066|consen   40 DAISCCAVHDKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF-K  112 (846)
T ss_pred             hHHHHHHhhcceeeeccccceEEEEecCCc-c-ccccccccc----ccCCceEEEecCCCcEEEeeccCCccceeEec-C
Confidence            344566678899999999999999986543 2 333334433    44799999999999999999988887776654 5


Q ss_pred             ccEEEEEEcCC-------eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCc
Q psy9182         315 EAVLHLRFSNG-------MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       315 ~~i~~~~~~~~-------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                      .++.+++++|+       .+++|+..| +.++.-+--..... .......+.|.++.|.|+++|-++.+| |++||+.+.
T Consensus       113 rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~-v~l~~~eG~I~~i~W~g~lIAWand~G-v~vyd~~~~  189 (846)
T KOG2066|consen  113 RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS-VVLSEGEGPIHSIKWRGNLIAWANDDG-VKVYDTPTR  189 (846)
T ss_pred             CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccc-eeeecCccceEEEEecCcEEEEecCCC-cEEEecccc
Confidence            67888998876       788999888 77765322111111 135567889999999999999998877 899999999


Q ss_pred             eEEEEEcCCcccE------EEEEeCCCEEEEEeCCCcEEEEECC
Q psy9182         388 EFVRTLNGHKRGI------ACLQYRDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       388 ~~~~~~~~~~~~v------~~~~~~~~~l~~~~~dg~v~iwd~~  425 (486)
                      +.+..++.....+      ..+.|.+...++-|...+|+|..++
T Consensus       190 ~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d~v~i~~I~  233 (846)
T KOG2066|consen  190 QRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGDSVKICSIK  233 (846)
T ss_pred             ceeeccCCCCCCCCcccCCCceEecCCCeEEEecCCeEEEEEEe
Confidence            8888776444333      3455644333344556688988887

>KOG2695|consensus

Probab=98.72  E-value=5.4e-08  Score=84.41  Aligned_cols=151  Identities=15%  Similarity=0.182  Sum_probs=111.6

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC-----cEEEEecccCc
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG-----EMVNTLIHHCE  315 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~-----~~~~~~~~~~~  315 (486)
                      .+-. ++.+.+-.|-+-|++++... .|. ..+.|.++.|  .+++++.|+.+|.|..+|++.+     .+... .-|..
T Consensus       224 ~gyh-fs~G~sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r-lyh~S  299 (425)
T KOG2695|consen  224 MGYH-FSVGLSQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR-LYHDS  299 (425)
T ss_pred             ceee-ecccccceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE-EEcCc
Confidence            3444 44455667888888876533 233 5567888888  5789999999999999999875     22333 34677


Q ss_pred             cEEEEE---EcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCce
Q psy9182         316 AVLHLR---FSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       316 ~i~~~~---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .|+++.   |++..|.+.+.+|.|++||++.-+.........+|...-.-+.+    .+..+++++.|...+||.++.+.
T Consensus       300 svtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~gh  379 (425)
T KOG2695|consen  300 SVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGH  379 (425)
T ss_pred             chhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCc
Confidence            777765   45678999999999999999987664445667777665554444    56788889999999999999999


Q ss_pred             EEEEEcCCc
Q psy9182         389 FVRTLNGHK  397 (486)
Q Consensus       389 ~~~~~~~~~  397 (486)
                      ++.+++...
T Consensus       380 Ll~tipf~~  388 (425)
T KOG2695|consen  380 LLCTIPFPY  388 (425)
T ss_pred             eeeccCCCC
Confidence            998887443

>KOG0309|consensus

Probab=98.71  E-value=1e-07  Score=90.73  Aligned_cols=190  Identities=21%  Similarity=0.383  Sum_probs=137.7

Q ss_pred             EEEecCCEEEEEeCCCcEEEEECCCC-cEEEEecc-cCccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         279 CLQYDERVIISGSSDSTVRVWDVNTG-EMVNTLIH-HCEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       279 ~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~-~~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                      ++...|+-++.++.-| +.+.|+... .+.+-+.. ..-.+....|++    ++-++......-.+|++...........
T Consensus        31 si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~  109 (1081)
T KOG0309|consen   31 SINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFV  109 (1081)
T ss_pred             eeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEE
Confidence            3444677778887776 666776543 22222211 123456666764    3666666666777899987666566677


Q ss_pred             eecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182         353 LVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       353 ~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~  426 (486)
                      +.+|...++.+.|   ....+++++.|-.+..||+++. .++..+..-......+.|+  ...+.+.+..+.|++||++.
T Consensus       110 lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~  189 (1081)
T KOG0309|consen  110 LHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRK  189 (1081)
T ss_pred             EecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccC
Confidence            8899999999999   4568999999999999999885 4455665555566667774  33445556778899999987


Q ss_pred             C-eeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         427 G-ACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       427 ~-~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      | .++..+++|...|+.+.|   --..+.+.+.||+|++||.+....
T Consensus       190 gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~  236 (1081)
T KOG0309|consen  190 GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTT  236 (1081)
T ss_pred             CCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccccc
Confidence            5 678889999999999999   345688999999999999886643

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.70  E-value=2e-05  Score=76.44  Aligned_cols=205  Identities=16%  Similarity=0.126  Sum_probs=120.5

Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC---CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD---STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      .|.++|...+.. +.+..+...+....|  ||+.|+..+.+   ..|.+||+.+++... +...........|+++  .+
T Consensus       180 ~l~~~d~~g~~~-~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~l  257 (430)
T PRK00178        180 TLQRSDYDGARA-VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKL  257 (430)
T ss_pred             EEEEECCCCCCc-eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEE
Confidence            477778765543 444456667777666  78888776543   369999999886543 3222334456778764  45


Q ss_pred             E-EEeCCC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-C--CcEEEEECCCceEEEEE-cCCcc
Q psy9182         328 V-TCSKDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-D--RTIKVWNTSSCEFVRTL-NGHKR  398 (486)
Q Consensus       328 ~-~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d--~~i~iwd~~~~~~~~~~-~~~~~  398 (486)
                      + +...+|  .|++||+.+++...    +..+........|  ||+.++..+. +  ..|+++|+.+++..... .+...
T Consensus       258 a~~~~~~g~~~Iy~~d~~~~~~~~----lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~  333 (430)
T PRK00178        258 AFVLSKDGNPEIYVMDLASRQLSR----VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYN  333 (430)
T ss_pred             EEEEccCCCceEEEEECCCCCeEE----cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCc
Confidence            4 444454  68888998765322    2223333333445  7887766553 3  35888888877643322 22222


Q ss_pred             cEEEEEeCCCEEEEEeCC-C--cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC-C--cEEEEeCCCC
Q psy9182         399 GIACLQYRDRLVVSGSSD-N--TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD-G--KIKVWNLVAA  467 (486)
Q Consensus       399 ~v~~~~~~~~~l~~~~~d-g--~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d-g--~v~iwdl~~~  467 (486)
                      ....++.+++.++..+.+ +  .|.++|+.+++........  ......|  ||+.++..+.+ |  .|.++++...
T Consensus       334 ~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~--~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~  408 (430)
T PRK00178        334 ARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTS--LDESPSVAPNGTMLIYATRQQGRGVLMLVSINGR  408 (430)
T ss_pred             cceEECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCC--CCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            233455678888776643 3  5888999887653322221  1123345  88887766543 3  4667777543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.65  E-value=1.6e-05  Score=77.16  Aligned_cols=203  Identities=13%  Similarity=0.068  Sum_probs=114.8

Q ss_pred             EEEEeCCCEEEEEecC---CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCC--cEEEEECCCCcEEEE
Q psy9182         238 YCLQYDDHKIVSGLRD---NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDS--TVRVWDVNTGEMVNT  309 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg--~i~vwd~~~~~~~~~  309 (486)
                      ..++|+|+.|+..+.+   ..|.+||+.+++.... ....+.+....|  ||+.|+ +...+|  .|++||+.+++.. .
T Consensus       204 p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l-~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~  281 (430)
T PRK00178        204 PRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQI-TNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-R  281 (430)
T ss_pred             eeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEc-cCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-E
Confidence            3567788887765533   3688899988765432 222233334455  787776 444454  5888899887654 3


Q ss_pred             ecccCccEEEEEEcCC--eEEEEe-CCC--cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-C--cEEE
Q psy9182         310 LIHHCEAVLHLRFSNG--MMVTCS-KDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-R--TIKV  381 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~--~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-~--~i~i  381 (486)
                      +..+........|+++  .++..+ .+|  .|+++|+.+++....  ...+.......++.++++++..+.+ +  .|.+
T Consensus       282 lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~l--t~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~  359 (430)
T PRK00178        282 VTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERV--TFVGNYNARPRLSADGKTLVMVHRQDGNFHVAA  359 (430)
T ss_pred             cccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEe--ecCCCCccceEECCCCCEEEEEEccCCceEEEE
Confidence            4444444556678754  555444 333  577778776653221  1122222223445588888776643 2  5888


Q ss_pred             EECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         382 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       382 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      +|+.+++...........-..++.+|+.++..+.+   ..|.++++. |.....+..+.+.+...+|
T Consensus       360 ~dl~tg~~~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~w  425 (430)
T PRK00178        360 QDLQRGSVRILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPSW  425 (430)
T ss_pred             EECCCCCEEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCcc
Confidence            99988764332222122223455678887766643   346667765 4444445444444544444

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.65  E-value=4e-05  Score=74.25  Aligned_cols=205  Identities=19%  Similarity=0.178  Sum_probs=115.1

Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC-C--cEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD-S--TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-g--~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      .|.++|...... +.+..+...+.+..|  ||+.|+..+.+ +  .|++||+.+++... +...........|+++  .+
T Consensus       199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~L  276 (448)
T PRK04792        199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKL  276 (448)
T ss_pred             EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEE
Confidence            566777655433 344445566666666  88888766543 2  58899998876533 2222233345678764  44


Q ss_pred             E-EEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CC--cEEEEECCCceEEEE-EcCCcc
Q psy9182         328 V-TCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DR--TIKVWNTSSCEFVRT-LNGHKR  398 (486)
Q Consensus       328 ~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~--~i~iwd~~~~~~~~~-~~~~~~  398 (486)
                      + +...+|.  |+++|+.+++...    +..+........|  |++.++..+. ++  .|.++|+.+++.... +.++..
T Consensus       277 a~~~~~~g~~~Iy~~dl~tg~~~~----lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~  352 (448)
T PRK04792        277 ALVLSKDGQPEIYVVDIATKALTR----ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQN  352 (448)
T ss_pred             EEEEeCCCCeEEEEEECCCCCeEE----CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCC
Confidence            4 4566664  7778887765322    2223333334444  8887766553 33  577778877764332 233322


Q ss_pred             cEEEEEeCCCEEEEEeC-CC--cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC-CCc--EEEEeCCCC
Q psy9182         399 GIACLQYRDRLVVSGSS-DN--TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY-DGK--IKVWNLVAA  467 (486)
Q Consensus       399 ~v~~~~~~~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~-dg~--v~iwdl~~~  467 (486)
                      .-..++.+|++|+..+. ++  .|.++|+.+++.. .+.... ......|  ||+.|+..+. +|.  +.+++++..
T Consensus       353 ~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~  427 (448)
T PRK04792        353 LGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGR  427 (448)
T ss_pred             cCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-CCCCceECCCCCEEEEEEecCCceEEEEEECCCC
Confidence            22345567888776654 34  4566788877643 332221 1112245  8888766554 343  677777544

>KOG4714|consensus

Probab=98.63  E-value=1.6e-07  Score=78.38  Aligned_cols=143  Identities=16%  Similarity=0.261  Sum_probs=90.0

Q ss_pred             cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccE-EEEEeCCCEEEEEe-----CCCcEEEEECCCceEEEEEcCC
Q psy9182         323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV-NVVDFDEKYIVSAS-----GDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       323 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      ..+.++++..||.+.+++.+...... .+....|.... .++.-.++.+.++.     .-+..+.|+++..+.+..-...
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~-~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~  178 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALM-SRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKA  178 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhh-hhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccc
Confidence            34578999999999999876622111 01111111111 11111344444332     2234556665543322221112


Q ss_pred             cccEEEEEeC---CCEEEEEeCCCcEEEEECCCCee-eEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCC
Q psy9182         397 KRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       397 ~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ...|.+++-+   .+++++|+.||.+-+||.++... ...+..|+.+|+-+.|   ++..|+++++||.+.-||-.+
T Consensus       179 ~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  179 LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             cccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            2336666654   57889999999999999988744 3456889999999999   788899999999999999874

>KOG2066|consensus

Probab=98.61  E-value=1.7e-06  Score=83.55  Aligned_cols=180  Identities=15%  Similarity=0.181  Sum_probs=124.2

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcce
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTIL  186 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~  186 (486)
                      +.|++++  +++++-|..+|.|++.+... .. .+...|...      +               .+|.++++||.||+|.
T Consensus        42 is~~av~--~~~~~~GtH~g~v~~~~~~~-~~-~~~~~~s~~------~---------------~~Gey~asCS~DGkv~   96 (846)
T KOG2066|consen   42 ISCCAVH--DKFFALGTHRGAVYLTTCQG-NP-KTNFDHSSS------I---------------LEGEYVASCSDDGKVV   96 (846)
T ss_pred             HHHHHhh--cceeeeccccceEEEEecCC-cc-ccccccccc------c---------------cCCceEEEecCCCcEE
Confidence            4555664  77999999999999998763 32 444444332      1               4778899999999888


Q ss_pred             eeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-----CCEEEEEecCCeEEEEEC
Q psy9182         187 IWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-----DHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       187 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~dg~i~i~d~  261 (486)
                      +-.+.+........                              -..+..+++++|+     .+.+++|+..| +.++.-
T Consensus        97 I~sl~~~~~~~~~d------------------------------f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er  145 (846)
T KOG2066|consen   97 IGSLFTDDEITQYD------------------------------FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSER  145 (846)
T ss_pred             EeeccCCccceeEe------------------------------cCCcceeEEeccchhhhhhhheeecCcce-EEEehh
Confidence            88775544322111                              1234445666665     56799999988 777753


Q ss_pred             CC--ceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE------EEEEEcCCeEEEEeCC
Q psy9182         262 VS--LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV------LHLRFSNGMMVTCSKD  333 (486)
Q Consensus       262 ~~--~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i------~~~~~~~~~l~~~~~d  333 (486)
                      .-  .+....+..-.++|.++.|.|+++|-++.+| |++||+.+++.+..+......+      ..+.|.++.-++.+..
T Consensus       146 ~wlgnk~~v~l~~~eG~I~~i~W~g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~  224 (846)
T KOG2066|consen  146 NWLGNKDSVVLSEGEGPIHSIKWRGNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWG  224 (846)
T ss_pred             hhhcCccceeeecCccceEEEEecCcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecC
Confidence            21  1111245556789999999999999999888 9999999998887775543333      4567777666666677


Q ss_pred             CcEEEEECCC
Q psy9182         334 RSIAVWDMVS  343 (486)
Q Consensus       334 g~i~i~d~~~  343 (486)
                      .+|++..++.
T Consensus       225 d~v~i~~I~~  234 (846)
T KOG2066|consen  225 DSVKICSIKK  234 (846)
T ss_pred             CeEEEEEEec
Confidence            7899998873

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.59  E-value=0.00033  Score=64.12  Aligned_cols=179  Identities=15%  Similarity=0.218  Sum_probs=122.2

Q ss_pred             ecCCEEEEEeCCCcEEEEECCCCcEEEEecc------cCcc--------EEEEEEcC-CeEEEEeCCCcEEEEECCCCCc
Q psy9182         282 YDERVIISGSSDSTVRVWDVNTGEMVNTLIH------HCEA--------VLHLRFSN-GMMVTCSKDRSIAVWDMVSPNE  346 (486)
Q Consensus       282 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~------~~~~--------i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~  346 (486)
                      -||+.++. +..|.|.+||..+......--+      ...+        ....+..+ ++++..+ .|...+.+...+-.
T Consensus       276 sDGkrIvF-q~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~~~~  353 (668)
T COG4946         276 SDGKRIVF-QNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWDGYS  353 (668)
T ss_pred             CCCcEEEE-ecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCCCee
Confidence            36776665 3457899999887654321111      0000        11122233 3555444 56777776655432


Q ss_pred             eeeEEeeecCcccEEEEEe--CCCEEEEEeCCC-cEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182         347 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRL  421 (486)
Q Consensus       347 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~i  421 (486)
                      +     ..++...|.-..+  +++-++.|..|| .+-++|.++++ +..+...-+.|.++..  +|++++++.....+.+
T Consensus       354 i-----qv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~v  427 (668)
T COG4946         354 I-----QVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWV  427 (668)
T ss_pred             E-----EcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEE
Confidence            2     2355666766555  777899999999 89999998876 4556666677777766  5889999999999999


Q ss_pred             EECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCC----cEEEEeCCCCC
Q psy9182         422 WDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDG----KIKVWNLVAAL  468 (486)
Q Consensus       422 wd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg----~v~iwdl~~~~  468 (486)
                      .|+.+|.....-+...+-|+.+.|  +++++|-+--+|    .|+++|+.++.
T Consensus       428 ididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K  480 (668)
T COG4946         428 IDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK  480 (668)
T ss_pred             EEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence            999999877666777788999999  777888776665    58899988753

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.59  E-value=1.4e-05  Score=77.33  Aligned_cols=204  Identities=13%  Similarity=0.107  Sum_probs=115.4

Q ss_pred             eEEEEeCCCEEEEEecC-C--eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEE-EeCCCc--EEEEECCCCcEEE
Q psy9182         237 VYCLQYDDHKIVSGLRD-N--TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS-GSSDST--VRVWDVNTGEMVN  308 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~dg~--i~vwd~~~~~~~~  308 (486)
                      ...++|||+.|+..+.+ +  .|.+||+.+++...... ..+......|  |++.|+. .+.+|.  |+++|+.+++.. 
T Consensus       222 ~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~-~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-  299 (448)
T PRK04792        222 SPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTS-FPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-  299 (448)
T ss_pred             CceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecC-CCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-
Confidence            35678999988876543 2  68899998876533221 1222223444  8887764 555664  888898877653 


Q ss_pred             EecccCccEEEEEEcCC--eEEEEe-CCC--cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC-CC--cEE
Q psy9182         309 TLIHHCEAVLHLRFSNG--MMVTCS-KDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG-DR--TIK  380 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~~--~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-d~--~i~  380 (486)
                      .+..+........|+++  .++..+ .++  .|+++|+.+++....  ...+....-..++.||++++..+. ++  .|.
T Consensus       300 ~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L--t~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~  377 (448)
T PRK04792        300 RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL--TFEGEQNLGGSITPDGRSMIMVNRTNGKFNIA  377 (448)
T ss_pred             ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE--ecCCCCCcCeeECCCCCEEEEEEecCCceEEE
Confidence            34444445566778764  454443 344  466667766653321  122222222244558888877654 33  466


Q ss_pred             EEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeC-CCc--EEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         381 VWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS-DNT--IRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       381 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~--v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      ++|+.+++...........-..++.+++.|+..+. +|.  +++++.. |.....+..+.+.+...+|
T Consensus       378 ~~dl~~g~~~~lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~~~~~l~~~~g~~~~p~W  444 (448)
T PRK04792        378 RQDLETGAMQVLTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GRFKARLPAGQGEVKSPAW  444 (448)
T ss_pred             EEECCCCCeEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCcc
Confidence            67888776432222211111245567877766554 333  6777764 6666666655555555555

>KOG4532|consensus

Probab=98.57  E-value=2.4e-05  Score=66.03  Aligned_cols=184  Identities=11%  Similarity=0.048  Sum_probs=118.6

Q ss_pred             cCCEEEEEeCCCcEEEEECCCCcEEE-EecccCccEE---EEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcc
Q psy9182         283 DERVIISGSSDSTVRVWDVNTGEMVN-TLIHHCEAVL---HLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA  358 (486)
Q Consensus       283 ~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~i~---~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~  358 (486)
                      ...+|+.|+..|...+|...+.+-.. ....+...|.   ..+-..-.+..++.|.++++.++..+........   ..-
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~---~~~  159 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHN---QNL  159 (344)
T ss_pred             cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeec---ccc
Confidence            45689999999999999998765433 2233333222   1222233677788888888888876543321111   112


Q ss_pred             cEEEEEe--CCCEEEEEeCCCcEEEEECCCc-e-EEEEE-cCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeE
Q psy9182         359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSC-E-FVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR  431 (486)
Q Consensus       359 ~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~-~-~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~  431 (486)
                      .+.+++.  +++++++.+....|..|.+... + .+... ......-.+.+|  ....+|+++.||++.|||++......
T Consensus       160 ~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm  239 (344)
T KOG4532|consen  160 TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPM  239 (344)
T ss_pred             ceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccch
Confidence            2555555  8899999999999999988653 2 22312 222333344555  47789999999999999998754332


Q ss_pred             E-----ecCcccCeEEEEec--C--CEEEEEeCCCcEEEEeCCCCCC
Q psy9182         432 V-----LEGHEELVRCIRFD--A--KRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       432 ~-----~~~h~~~v~~~~~~--~--~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      .     -..|.+.+..+.|.  |  .+|...-.=+.+++-|+++..+
T Consensus       240 ~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~  286 (344)
T KOG4532|consen  240 AEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVN  286 (344)
T ss_pred             hhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCce
Confidence            2     24588899999993  2  2344434457799999988754

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.56  E-value=2.6e-07  Score=55.38  Aligned_cols=37  Identities=38%  Similarity=0.897  Sum_probs=30.8

Q ss_pred             CeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      |+++..+.+|.+.|++|+|  ++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4677888888888888888  778888888888888886

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.54  E-value=0.00019  Score=76.47  Aligned_cols=229  Identities=13%  Similarity=0.148  Sum_probs=135.7

Q ss_pred             EEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcC--Cc------------ccEEEEEe--cCCEEEEEe-CCCcEEEE
Q psy9182         238 YCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTG--HT------------GSVLCLQY--DERVIISGS-SDSTVRVW  299 (486)
Q Consensus       238 ~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~------------~~v~~~~~--~~~~l~~~~-~dg~i~vw  299 (486)
                      ++++. ++..+++-..++.|.++|... ..+..+.+  ..            .....+++  +++.|+++. .++.|+++
T Consensus       573 vavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~i  651 (1057)
T PLN02919        573 LAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREI  651 (1057)
T ss_pred             EEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEE
Confidence            45555 455667777788999999764 44433322  10            12355666  456665554 45779999


Q ss_pred             ECCCCcEEEEeccc-----------------CccEEEEEEcC--C-eEEEEeCCCcEEEEECCCCCceeeEE-----eee
Q psy9182         300 DVNTGEMVNTLIHH-----------------CEAVLHLRFSN--G-MMVTCSKDRSIAVWDMVSPNEITLRR-----VLV  354 (486)
Q Consensus       300 d~~~~~~~~~~~~~-----------------~~~i~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~  354 (486)
                      |..++. +.++.+.                 -..-..+++++  + .+++.+.++.|++||..++.......     ...
T Consensus       652 d~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~  730 (1057)
T PLN02919        652 DFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLN  730 (1057)
T ss_pred             ecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCC
Confidence            987764 3333110                 01224677765  3 55666778899999987654321100     000


Q ss_pred             cC------cccEEEEEe--CCC-EEEEEeCCCcEEEEECCCceEEEEEc-------------CCc--------ccEEEEE
Q psy9182         355 GH------RAAVNVVDF--DEK-YIVSASGDRTIKVWNTSSCEFVRTLN-------------GHK--------RGIACLQ  404 (486)
Q Consensus       355 ~~------~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~-------------~~~--------~~v~~~~  404 (486)
                      ++      -.....+++  +++ .+++-+.++.|++||+.++.......             ...        .....+.
T Consensus       731 g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gva  810 (1057)
T PLN02919        731 GSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVL  810 (1057)
T ss_pred             CCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceee
Confidence            00      012233444  666 44555567899999998765321110             000        0112444


Q ss_pred             e--CCCEEEEEeCCCcEEEEECCCCeeeEEec-------------CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         405 Y--RDRLVVSGSSDNTIRLWDIECGACLRVLE-------------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       405 ~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------------~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +  +|+++++-+.++.|++||..++.......             +.-.....|++  +|+.+++-+.++.|++||+.++
T Consensus       811 vd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~  890 (1057)
T PLN02919        811 CAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKG  890 (1057)
T ss_pred             EeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence            4  57888888889999999998776553321             11124567777  7888888888999999999875


Q ss_pred             C
Q psy9182         468 L  468 (486)
Q Consensus       468 ~  468 (486)
                      .
T Consensus       891 ~  891 (1057)
T PLN02919        891 E  891 (1057)
T ss_pred             c
Confidence            4

>KOG1645|consensus

Probab=98.54  E-value=1.1e-05  Score=71.78  Aligned_cols=223  Identities=14%  Similarity=0.126  Sum_probs=128.0

Q ss_pred             EEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcE-EEEec-
Q psy9182         238 YCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEM-VNTLI-  311 (486)
Q Consensus       238 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~-  311 (486)
                      +++++..+ ++..++.+..|+|.|+++...+..+..+ ..+.+.+|   +.+++.+|..+|.|.+||++..+- +..+. 
T Consensus       199 lafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a  277 (463)
T KOG1645|consen  199 LAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPEGPLMELVA  277 (463)
T ss_pred             hccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCCchHhhhhh
Confidence            44555444 7888999999999999999999888877 77889888   457899999999999999986542 22221 


Q ss_pred             -ccCccEEEEEEc--------CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC--C-EEEEEeCCCc-
Q psy9182         312 -HHCEAVLHLRFS--------NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE--K-YIVSASGDRT-  378 (486)
Q Consensus       312 -~~~~~i~~~~~~--------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~d~~-  378 (486)
                       ....+|..++.-        +++++....+  +..|++.....-.......+..+.+.++..++  + .|++.-.+.+ 
T Consensus       278 ~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~tyRs~pn~  355 (463)
T KOG1645|consen  278 NVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLLTYRSNPNF  355 (463)
T ss_pred             hhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccceEEEEecCCCCC
Confidence             123344444432        2344443332  45565543221111111122344555555533  3 3443332211 


Q ss_pred             -----EEE-EECCCceEEEEEc-CC---------c-ccEEEEEeCCCE-EEEEeCCCcEEEEECCCCeeeEEecCcccCe
Q psy9182         379 -----IKV-WNTSSCEFVRTLN-GH---------K-RGIACLQYRDRL-VVSGSSDNTIRLWDIECGACLRVLEGHEELV  440 (486)
Q Consensus       379 -----i~i-wd~~~~~~~~~~~-~~---------~-~~v~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v  440 (486)
                           +.. -|..+|.++..-+ .+         . ..+... .+.++ +..|...+.+.+||..+.+.++.+.-. .+|
T Consensus       356 p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~-~~nn~iv~~gd~tn~lil~D~~s~evvQ~l~~~-epv  433 (463)
T KOG1645|consen  356 PQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAV-EDNNYIVVVGDSTNELILQDPHSFEVVQTLALS-EPV  433 (463)
T ss_pred             ccceeeeeeeccccCceeeeecccccCCcccccccccceecc-ccccEEEEecCCcceeEEeccchhheeeecccC-cce
Confidence                 111 1222233222111 11         1 111111 12343 445666788999999999999988754 789


Q ss_pred             EEEEe---cCCEEEEEeCCCcEEEEeCC
Q psy9182         441 RCIRF---DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       441 ~~~~~---~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .++..   ++.-++..-.|..++||..+
T Consensus       434 ~Dicp~~~n~~syLa~LTd~~v~Iyk~e  461 (463)
T KOG1645|consen  434 LDICPNDTNGSSYLALLTDDRVHIYKNE  461 (463)
T ss_pred             eecceeecCCcchhhheecceEEEEecC
Confidence            99888   44433334457779998765

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.53  E-value=0.00071  Score=70.91  Aligned_cols=332  Identities=15%  Similarity=0.192  Sum_probs=181.1

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecCcc------cceeEEE-------eec--------------
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK------RGIACLQ-------YRD--------------  156 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~------~~V~~~~-------~~~--------------  156 (486)
                      ...|.++.+|||+..|+....+|++.+-+ .+.+.+....-+.      ..| .+-       |.|              
T Consensus       120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~V-sVGWGkKeTQF~Gs~gK~aa~~~~~p~  197 (928)
T PF04762_consen  120 DSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSDDFGESKHV-SVGWGKKETQFHGSAGKAAARQLRDPT  197 (928)
T ss_pred             cCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCccccCCCcee-eeccCcccCccCcchhhhhhhhccCCC
Confidence            35678999999999999999999888764 2223222221110      011 111       110              


Q ss_pred             -----ceeEecCCCCceec---cCcceeecCCC------CCcceeeecccccccccCCCCCCCCCCCCcccccccccCce
Q psy9182         157 -----RLVVSGSSDNTIRY---RDEFQIVSSSH------DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKF  222 (486)
Q Consensus       157 -----~~~~~~~~d~~i~~---~~~~~l~s~s~------dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (486)
                           ...++ ..|+.+++   .||.+++..+.      -..+++|+-+ +.                            
T Consensus       198 ~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~----------------------------  247 (928)
T PF04762_consen  198 VPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE----------------------------  247 (928)
T ss_pred             CCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce----------------------------
Confidence                 01112 23344433   46777776654      2468888842 11                            


Q ss_pred             eEEEEeccCCCccceEEEEeCCCEEEEEec---CCeEEEEECCCceeeEEEc----CCcccEEEEEe--cCCEEEEEeCC
Q psy9182         223 LLQRINCRSENSKGVYCLQYDDHKIVSGLR---DNTIKVWDRVSLQCIKVLT----GHTGSVLCLQY--DERVIISGSSD  293 (486)
Q Consensus       223 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~----~~~~~v~~~~~--~~~~l~~~~~d  293 (486)
                       +.........-...+++.|.|+++|+.-.   ...|.+|.- +|-....|.    .....|..+.|  |+..|+....|
T Consensus       248 -L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~  325 (928)
T PF04762_consen  248 -LQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED  325 (928)
T ss_pred             -EEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC
Confidence             11111111233456778889998888765   345777763 333333332    34567899999  77888887766


Q ss_pred             CcEEEEECCCCcE--EEEecc-cCccEEEEEEcC---CeEEEEeCCCcEEEEECC----CC----------------Cce
Q psy9182         294 STVRVWDVNTGEM--VNTLIH-HCEAVLHLRFSN---GMMVTCSKDRSIAVWDMV----SP----------------NEI  347 (486)
Q Consensus       294 g~i~vwd~~~~~~--~~~~~~-~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~----~~----------------~~~  347 (486)
                      . |.+|-..+-..  .+.+.. ....+..+.|++   ..|.+.+.+|.+..++..    .+                ..+
T Consensus       326 ~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~l  404 (928)
T PF04762_consen  326 R-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKL  404 (928)
T ss_pred             C-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeE
Confidence            5 99999877543  223322 123344588875   366777766766655431    11                000


Q ss_pred             eeE------------EeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE--------EEEEcC----------
Q psy9182         348 TLR------------RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF--------VRTLNG----------  395 (486)
Q Consensus       348 ~~~------------~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~--------~~~~~~----------  395 (486)
                      ...            .........|..++|  ++..+++-..||.|.+|.......        ...+..          
T Consensus       405 llTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  484 (928)
T PF04762_consen  405 LLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSEL  484 (928)
T ss_pred             EEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhccccccccccccc
Confidence            000            001123466778888  455588889999999998543221        111111          


Q ss_pred             CcccEEEEEeC-C-CEEEEEeCC---CcEEEEECCCCe---eeEEecCcccCeEEEEe-c-CCEEEEEeCCCcEEEEeCC
Q psy9182         396 HKRGIACLQYR-D-RLVVSGSSD---NTIRLWDIECGA---CLRVLEGHEELVRCIRF-D-AKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       396 ~~~~v~~~~~~-~-~~l~~~~~d---g~v~iwd~~~~~---~~~~~~~h~~~v~~~~~-~-~~~l~s~~~dg~v~iwdl~  465 (486)
                      ....+..+.|. . .+++....+   ..+.++++...+   .+.....-...+..+.. + ...++.-..||.+...+..
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~  564 (928)
T PF04762_consen  485 PLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSD  564 (928)
T ss_pred             ccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecC
Confidence            12345566663 3 334444333   578888874332   23333333445555555 2 2236777779998877666


Q ss_pred             CCCCC
Q psy9182         466 AALDP  470 (486)
Q Consensus       466 ~~~~~  470 (486)
                      .....
T Consensus       565 ~~~~~  569 (928)
T PF04762_consen  565 GELSQ  569 (928)
T ss_pred             CCccc
Confidence            55443

>KOG0882|consensus

Probab=98.48  E-value=7.4e-06  Score=74.00  Aligned_cols=244  Identities=20%  Similarity=0.187  Sum_probs=152.9

Q ss_pred             ccccccCCccCcceEEEeecCceeeeccccc---ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSS---CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~---~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      ++++...+..-.+++.+++.||.++.|.-..   -+.+..+..|...|..++.+               .++..+.|.+.
T Consensus         9 rd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S---------------~dg~L~~Sv~d   73 (558)
T KOG0882|consen    9 RDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVS---------------YDGWLFRSVED   73 (558)
T ss_pred             cceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhcc---------------ccceeEeeccC
Confidence            3444444444677999999999999998643   23456667788777777664               45666888777


Q ss_pred             -CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC---CEEE-EEecCCeE
Q psy9182         182 -DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD---HKIV-SGLRDNTI  256 (486)
Q Consensus       182 -dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~-~~~~dg~i  256 (486)
                       |..++++|+++..........                             .-+..+.++...|   ..++ ....+|.+
T Consensus        74 ~Dhs~KvfDvEn~DminmiKL~-----------------------------~lPg~a~wv~skGd~~s~IAVs~~~sg~i  124 (558)
T KOG0882|consen   74 PDHSVKVFDVENFDMINMIKLV-----------------------------DLPGFAEWVTSKGDKISLIAVSLFKSGKI  124 (558)
T ss_pred             cccceeEEEeeccchhhhcccc-----------------------------cCCCceEEecCCCCeeeeEEeecccCCCc
Confidence             999999998765433222111                             1122222222222   1233 34467889


Q ss_pred             EEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC------CcEEEEe---------cccCccE
Q psy9182         257 KVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT------GEMVNTL---------IHHCEAV  317 (486)
Q Consensus       257 ~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~------~~~~~~~---------~~~~~~i  317 (486)
                      .++|-...-  ....-.-|..+|.++.+  .+..+++....|.|.-|....      .+....+         .......
T Consensus       125 ~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~p  204 (558)
T KOG0882|consen  125 FVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEP  204 (558)
T ss_pred             EEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCc
Confidence            999865543  22333458899999888  567888888889999999872      1111111         1223445


Q ss_pred             EEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEe-----------------------------eecCcc-cEEEEEe
Q psy9182         318 LHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRV-----------------------------LVGHRA-AVNVVDF  365 (486)
Q Consensus       318 ~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----------------------------~~~~~~-~v~~~~~  365 (486)
                      .++.+++  ..+.+-+.|..|++++..+++.......                             +..|.. .-+.+.|
T Consensus       205 ts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~f  284 (558)
T KOG0882|consen  205 TSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVF  284 (558)
T ss_pred             cceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEE
Confidence            6777765  4778888999999999988764322111                             011111 1123344


Q ss_pred             --CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         366 --DEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       366 --~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                        .+++|+-++.=| |++.++.++++++.+
T Consensus       285 des~~flly~t~~g-ikvin~~tn~v~ri~  313 (558)
T KOG0882|consen  285 DESGNFLLYGTILG-IKVINLDTNTVVRIL  313 (558)
T ss_pred             cCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence              578888877654 889999998877765

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.48  E-value=0.00019  Score=65.68  Aligned_cols=146  Identities=15%  Similarity=0.151  Sum_probs=99.7

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC-cceeeecccc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD-TILIWDFLNY  193 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg-~i~vWd~~~~  193 (486)
                      +|.+++.-+. |...|.+...+-.++  -+|.+.|.-..+.               .++..++.|..|| .+-++|.+++
T Consensus       331 ~Gd~ia~VSR-GkaFi~~~~~~~~iq--v~~~~~VrY~r~~---------------~~~e~~vigt~dgD~l~iyd~~~~  392 (668)
T COG4946         331 NGDYIALVSR-GKAFIMRPWDGYSIQ--VGKKGGVRYRRIQ---------------VDPEGDVIGTNDGDKLGIYDKDGG  392 (668)
T ss_pred             CCcEEEEEec-CcEEEECCCCCeeEE--cCCCCceEEEEEc---------------cCCcceEEeccCCceEEEEecCCc
Confidence            5777777654 566665554443332  2456667666663               2444677778887 7889997654


Q ss_pred             cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182         194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                      .......                              .-.....+.++++|++++++.....|.+.|+.++.....-+..
T Consensus       393 e~kr~e~------------------------------~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~  442 (668)
T COG4946         393 EVKRIEK------------------------------DLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSE  442 (668)
T ss_pred             eEEEeeC------------------------------CccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccc
Confidence            4322111                              0123344567789999999999999999999999877666667


Q ss_pred             cccEEEEEe--cCCEEEEEeCCC----cEEEEECCCCcEEE
Q psy9182         274 TGSVLCLQY--DERVIISGSSDS----TVRVWDVNTGEMVN  308 (486)
Q Consensus       274 ~~~v~~~~~--~~~~l~~~~~dg----~i~vwd~~~~~~~~  308 (486)
                      .+-|+.+.|  +++++|-+--+|    .|+++|+.+++...
T Consensus       443 ~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~  483 (668)
T COG4946         443 YGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD  483 (668)
T ss_pred             cceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence            778899988  677888776654    58999998877654

>KOG2114|consensus

Probab=98.43  E-value=7.7e-05  Score=73.14  Aligned_cols=203  Identities=13%  Similarity=0.230  Sum_probs=134.2

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCccc-EEEEEe-cC-CEEEEEeCCC-----cEEEEECCCC---
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQY-DE-RVIISGSSDS-----TVRVWDVNTG---  304 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~-~~-~~l~~~~~dg-----~i~vwd~~~~---  304 (486)
                      .+.|+++++..++.|+.+|.|.+++ ...+.+..++.+... |..+.. ++ ++|++.+.|+     .+++||++.-   
T Consensus        27 ~isc~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n  105 (933)
T KOG2114|consen   27 AISCCSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN  105 (933)
T ss_pred             ceeEEcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence            7889999999999999999999987 334555777777766 444444 33 5777777664     4899998632   


Q ss_pred             ---cEEE--Eecc-----cCccEEEEEEcCC--eEEEEeCCCcEEEEECC--CCCceeeEEeeecCcccEEEEEe--CCC
Q psy9182         305 ---EMVN--TLIH-----HCEAVLHLRFSNG--MMVTCSKDRSIAVWDMV--SPNEITLRRVLVGHRAAVNVVDF--DEK  368 (486)
Q Consensus       305 ---~~~~--~~~~-----~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~v~~~~~--~~~  368 (486)
                         +++.  .+..     ...++.+++.+.+  .+++|-.+|.|..+.=.  ..+.. ..........+|+.+.+  ++.
T Consensus       106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgs-r~~~~~~~~~pITgL~~~~d~~  184 (933)
T KOG2114|consen  106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGS-RQDYSHRGKEPITGLALRSDGK  184 (933)
T ss_pred             CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhcccc-ceeeeccCCCCceeeEEecCCc
Confidence               3331  2211     2456777777754  89999999999988522  11111 12233345678999998  666


Q ss_pred             E-EEEEeCCCcEEEEECCCceE-EEEEcCCcccEEEEEeC-CCE-EEEEeCCCcEEEEECCCCeeeEEec-CcccCeEE
Q psy9182         369 Y-IVSASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYR-DRL-VVSGSSDNTIRLWDIECGACLRVLE-GHEELVRC  442 (486)
Q Consensus       369 ~-l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~-~~~-l~~~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~  442 (486)
                      . +++++ ...|.+|.+....+ ...+..|...+.|.+++ +.. ++++ .+..|.+|+.....+-..+. +|......
T Consensus       185 s~lFv~T-t~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk~~~~  261 (933)
T KOG2114|consen  185 SVLFVAT-TEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKKEMLV  261 (933)
T ss_pred             eeEEEEe-cceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCeEEEEE
Confidence            5 33333 35799999884442 45577888889999886 333 3333 35679999998666666666 66654433

>KOG3621|consensus

Probab=98.42  E-value=6e-05  Score=72.29  Aligned_cols=223  Identities=12%  Similarity=0.130  Sum_probs=118.8

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceee---E--EE-cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC----cEE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCI---K--VL-TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG----EMV  307 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~--~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~----~~~  307 (486)
                      ++.+..++|+|+..|.|.++-+..+..-   .  .. +.|...|+|++|  ++..+++|...|.|..-.+.+.    ...
T Consensus        84 vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~  163 (726)
T KOG3621|consen   84 VSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKS  163 (726)
T ss_pred             ecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhcccc
Confidence            3444444555555555555544332111   0  00 127788999999  7889999999999998887762    112


Q ss_pred             EEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC------CCEEEEEeCCCcEEE
Q psy9182         308 NTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD------EKYIVSASGDRTIKV  381 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~d~~i~i  381 (486)
                      +.+......|..+.+...++++++--..+ +++++.+...+.-..........-++-+.      ...|+++ .- -.|+
T Consensus       164 q~il~~ds~IVQlD~~q~~LLVStl~r~~-Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~Iyca-RP-G~Rl  240 (726)
T KOG3621|consen  164 QEILSEDSEIVQLDYLQSYLLVSTLTRCI-LCQTEAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCA-RP-GLRL  240 (726)
T ss_pred             ceeeccCcceEEeecccceehHhhhhhhh-eeecchhHHHHhcCCCcCCccccceEEeeccccCCCceEEEe-cC-CCce
Confidence            33344467788888887776666554443 34444322111000000010111122221      1233333 22 3567


Q ss_pred             EECCC-ceEEEEEc----------------C--------------CcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeee
Q psy9182         382 WNTSS-CEFVRTLN----------------G--------------HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL  430 (486)
Q Consensus       382 wd~~~-~~~~~~~~----------------~--------------~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~  430 (486)
                      |..+- |+.+++..                .              |-+-..+...++..+++-+.-| |+|+|.++.+.+
T Consensus       241 Wead~~G~V~~Thqfk~ala~~p~p~i~~~s~esp~~~~~~~~~q~ls~~k~~~l~~~~vLa~te~G-iyv~d~~~~~v~  319 (726)
T KOG3621|consen  241 WEADFAGEVIKTHQFKDALARPPAPEIPIRSLESPNQRSLPSGTQHLSLSKSSTLHSDRVLAWTEVG-IYVFDSNNSQVY  319 (726)
T ss_pred             EEeecceeEEEeeehhhhhccCCCCcccCCCcCCccccCCCCCccccccceeEEeecceEEEeecce-EEEEEeccceEE
Confidence            76442 33333221                0              0111122223445455555445 899998865544


Q ss_pred             EEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         431 RVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .-. .....|.+++..++-|+.--.||.+++..+.+.
T Consensus       320 l~s-e~~~DI~dVs~~~neiFvL~~d~~l~~~sv~s~  355 (726)
T KOG3621|consen  320 LWS-EGGHDILDVSHCGNEIFVLNLDRGLKVESVASR  355 (726)
T ss_pred             Eee-cCCCceeEEeecCceEEEEecCCceeEEEeehh
Confidence            332 234568888888888888888898888887764

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.40  E-value=0.00061  Score=72.76  Aligned_cols=191  Identities=16%  Similarity=0.180  Sum_probs=115.0

Q ss_pred             eEEEEeCCCEEEEEe-cCCeEEEEECCCceeeEEEcCC-----------------cccEEEEEe---cCCEEEEEeCCCc
Q psy9182         237 VYCLQYDDHKIVSGL-RDNTIKVWDRVSLQCIKVLTGH-----------------TGSVLCLQY---DERVIISGSSDST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-----------------~~~v~~~~~---~~~~l~~~~~dg~  295 (486)
                      -+++.++++.|+++. .++.|+++|..++.. .++.+-                 -.....+++   ++..+++...++.
T Consensus       628 GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~  706 (1057)
T PLN02919        628 GLAYNAKKNLLYVADTENHALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQ  706 (1057)
T ss_pred             EEEEeCCCCEEEEEeCCCceEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCe
Confidence            345666777665554 456899999877653 332110                 011234555   3456666677889


Q ss_pred             EEEEECCCCcEEEEeccc---------------CccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEE------
Q psy9182         296 VRVWDVNTGEMVNTLIHH---------------CEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRR------  351 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~---------------~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~------  351 (486)
                      |++||..++... .+.+.               ......++++++   .+++-+.++.|++||+.++.......      
T Consensus       707 I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~  785 (1057)
T PLN02919        707 IWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFS  785 (1057)
T ss_pred             EEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccC
Confidence            999999876543 22110               112345777653   45556677999999998764321100      


Q ss_pred             ----eeecC--------cccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC-------------CcccEEEEE
Q psy9182         352 ----VLVGH--------RAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-------------HKRGIACLQ  404 (486)
Q Consensus       352 ----~~~~~--------~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~  404 (486)
                          .+...        -.....+.+  +|+.+++-..++.|++||..++........             .-.....++
T Consensus       786 ~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIa  865 (1057)
T PLN02919        786 DNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLA  865 (1057)
T ss_pred             cccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEE
Confidence                00000        001224444  678888888899999999988765533211             111234444


Q ss_pred             e--CCCEEEEEeCCCcEEEEECCCCee
Q psy9182         405 Y--RDRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       405 ~--~~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      +  +|+++++-+.++.|++||+.+++.
T Consensus       866 vd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        866 LGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             EeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            4  588888888999999999988764

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.33  E-value=1.6e-05  Score=68.43  Aligned_cols=194  Identities=18%  Similarity=0.350  Sum_probs=118.4

Q ss_pred             ccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc-----EEEEecccC------------ccEEEEEEcC----CeEEEEe
Q psy9182         275 GSVLCLQY--DERVIISGSSDSTVRVWDVNTGE-----MVNTLIHHC------------EAVLHLRFSN----GMMVTCS  331 (486)
Q Consensus       275 ~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~------------~~i~~~~~~~----~~l~~~~  331 (486)
                      ..|+++.|  .|.++++|...|.|.++.-+...     ....++.|.            ..|..+.|..    +.++..+
T Consensus        27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlst  106 (460)
T COG5170          27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLST  106 (460)
T ss_pred             ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEec
Confidence            45677777  46788888888888888754322     112233332            3455666642    3677788


Q ss_pred             CCCcEEEEECCCCCce---------------------------------------eeEE-eeecCcccEEEEEe--CCCE
Q psy9182         332 KDRSIAVWDMVSPNEI---------------------------------------TLRR-VLVGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~---------------------------------------~~~~-~~~~~~~~v~~~~~--~~~~  369 (486)
                      .|.+|++|.+......                                       ...+ ....|...+.++++  |.+.
T Consensus       107 NdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et  186 (460)
T COG5170         107 NDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKET  186 (460)
T ss_pred             CCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchhe
Confidence            8999999987543100                                       0000 11346677788888  3444


Q ss_pred             EEEEeCCCcEEEEECCCceE---EEEEcCCc-----ccEEEEEeC---CCEEEEEeCCCcEEEEECCCCee------eE-
Q psy9182         370 IVSASGDRTIKVWNTSSCEF---VRTLNGHK-----RGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC------LR-  431 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~---~~~~~~~~-----~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~------~~-  431 (486)
                      +++ ..|-.|.+|+++-...   +..++.|.     ..|++..|+   .+.+.-.+..|.|++-|++...+      +. 
T Consensus       187 ~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe  265 (460)
T COG5170         187 LLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFE  265 (460)
T ss_pred             eee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhh
Confidence            554 4677899999875322   22334443     235666665   46677788899999999984221      11 


Q ss_pred             ---------EecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         432 ---------VLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       432 ---------~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                               -+.+-...|..+.|  +|+++++-+ =-+|++||+.....|
T Consensus       266 ~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~p  314 (460)
T COG5170         266 LTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNP  314 (460)
T ss_pred             hccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCC
Confidence                     11122356788889  555666544 568999999987654

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.32  E-value=0.00054  Score=65.95  Aligned_cols=212  Identities=14%  Similarity=0.086  Sum_probs=112.8

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCE---EEEEeCCC--cEEEEECCCCcEEEEecccCccEEEEEEcCC-
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV---IISGSSDS--TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-  325 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~---l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-  325 (486)
                      ..|.+.|...+.... +........+-.|  ||+.   +++...+|  .|.+.++.+++..... ..........|+|+ 
T Consensus       165 ~~l~~~d~dG~~~~~-lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt-~~~g~~~~p~wSPDG  242 (428)
T PRK01029        165 GELWSVDYDGQNLRP-LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL-ALQGNQLMPTFSPRK  242 (428)
T ss_pred             ceEEEEcCCCCCceE-cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee-cCCCCccceEECCCC
Confidence            356677766554433 3333334444444  7754   23444443  5888898877643322 22334455778765 


Q ss_pred             -eEEEEe-CCC----cEEEEECCCCCceeeEEeeecCcccEE--EEEeCCCEEEEEe-CCCcEEEE--ECCC-ceEEEEE
Q psy9182         326 -MMVTCS-KDR----SIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSAS-GDRTIKVW--NTSS-CEFVRTL  393 (486)
Q Consensus       326 -~l~~~~-~dg----~i~i~d~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~-~d~~i~iw--d~~~-~~~~~~~  393 (486)
                       .++..+ .+|    .+..|++..+.................  +.++||+.|+..+ .+|...+|  ++.. +.....+
T Consensus       243 ~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~l  322 (428)
T PRK01029        243 KLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLL  322 (428)
T ss_pred             CEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEe
Confidence             555443 223    344467665321111122222222222  3444888777655 45654444  5432 2333444


Q ss_pred             cCCcccEEEE--EeCCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC---CCcEEEEe
Q psy9182         394 NGHKRGIACL--QYRDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY---DGKIKVWN  463 (486)
Q Consensus       394 ~~~~~~v~~~--~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~---dg~v~iwd  463 (486)
                      ..+...+...  +++|+.|+..+.+   ..|.+||+.+++... +......+....|  ||+.|+..+.   ...|.+||
T Consensus       323 t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vd  401 (428)
T PRK01029        323 TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLIS  401 (428)
T ss_pred             ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEE
Confidence            4443344444  4468888766543   469999999887644 3333345667777  8888765433   35688889


Q ss_pred             CCCCC
Q psy9182         464 LVAAL  468 (486)
Q Consensus       464 l~~~~  468 (486)
                      +.++.
T Consensus       402 l~~g~  406 (428)
T PRK01029        402 LITKK  406 (428)
T ss_pred             CCCCC
Confidence            87654

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.31  E-value=0.00038  Score=67.03  Aligned_cols=201  Identities=13%  Similarity=0.084  Sum_probs=107.0

Q ss_pred             EEEeCCCEE---EEEecCC--eEEEEECCCceeeEEEcCCcccEEE--EEecCCEEEEEeC-CC----cEEEEECCCC--
Q psy9182         239 CLQYDDHKI---VSGLRDN--TIKVWDRVSLQCIKVLTGHTGSVLC--LQYDERVIISGSS-DS----TVRVWDVNTG--  304 (486)
Q Consensus       239 ~~~~~~~~l---~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~-dg----~i~vwd~~~~--  304 (486)
                      .++|||+.+   ++...+|  .|.+.++.+++..+... ..+....  ++.||+.|+..+. +|    .+..|++..+  
T Consensus       191 ~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~-~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~  269 (428)
T PRK01029        191 TWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILA-LQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAI  269 (428)
T ss_pred             eEccCCCceEEEEEEccCCCceEEEEECCCCCceEeec-CCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCC
Confidence            678898752   2444443  58888888776543332 2222333  4448888776553 22    3444777653  


Q ss_pred             -cEEEEecccCccEEEEEEcCC--eEEEEe-CCCcEEEE--ECCC-CCceeeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182         305 -EMVNTLIHHCEAVLHLRFSNG--MMVTCS-KDRSIAVW--DMVS-PNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG  375 (486)
Q Consensus       305 -~~~~~~~~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~--d~~~-~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  375 (486)
                       +................|+|+  .++..+ .+|...+|  ++.. +...   ..+..+...+....|  ||+.|+..+.
T Consensus       270 g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~---~~lt~~~~~~~~p~wSPDG~~Laf~~~  346 (428)
T PRK01029        270 GKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP---RLLTKKYRNSSCPAWSPDGKKIAFCSV  346 (428)
T ss_pred             CcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce---EEeccCCCCccceeECCCCCEEEEEEc
Confidence             322222222233456678765  555544 46655555  4432 1111   222222233334444  8888877654


Q ss_pred             C---CcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         376 D---RTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSS---DNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       376 d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      +   ..|.+||+.+++...... ....+....|  +|+.|+..+.   ...|.++|+..++...... ..+.+...+|
T Consensus       347 ~~g~~~I~v~dl~~g~~~~Lt~-~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~-~~g~~~~p~W  422 (428)
T PRK01029        347 IKGVRQICVYDLATGRDYQLTT-SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI-GSGEKRFPSW  422 (428)
T ss_pred             CCCCcEEEEEECCCCCeEEccC-CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CCCcccCcee
Confidence            3   469999999887643332 2233444445  5777765433   3568888988776544333 3333444444

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.30  E-value=0.0025  Score=62.94  Aligned_cols=288  Identities=10%  Similarity=0.105  Sum_probs=151.6

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcc-cceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      +.+|..++.++.|+-.|..+|+.+..+.... ..+......+      ...+.+.+.+ ..++.++.|+.+.-.|..+++
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~------~~~rg~av~~-~~v~v~t~dg~l~ALDa~TGk  141 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCD------VVNRGVALYD-GKVFFGTLDARLVALDAKTGK  141 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccc------cccccceEEC-CEEEEEcCCCEEEEEECCCCC
Confidence            4577777888899999999999888765321 1111100000      0001111122 234555667777777766555


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------cCCeEEEEECCCceeeE
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------RDNTIKVWDRVSLQCIK  268 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~  268 (486)
                      ............                      ........++    .+..++++.      .+|.|..+|..+|+.+.
T Consensus       142 ~~W~~~~~~~~~----------------------~~~~tssP~v----~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW  195 (527)
T TIGR03075       142 VVWSKKNGDYKA----------------------GYTITAAPLV----VKGKVITGISGGEFGVRGYVTAYDAKTGKLVW  195 (527)
T ss_pred             EEeecccccccc----------------------cccccCCcEE----ECCEEEEeecccccCCCcEEEEEECCCCceeE
Confidence            433221110000                      0000000111    133455543      26889999999999887


Q ss_pred             EEcCCcc-------------------------------cE-EEEEec--CCEEEEEeCC-----C-----------cEEE
Q psy9182         269 VLTGHTG-------------------------------SV-LCLQYD--ERVIISGSSD-----S-----------TVRV  298 (486)
Q Consensus       269 ~~~~~~~-------------------------------~v-~~~~~~--~~~l~~~~~d-----g-----------~i~v  298 (486)
                      .+..-..                               .+ ..+++|  ..+++.+..+     +           .|.-
T Consensus       196 ~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vA  275 (527)
T TIGR03075       196 RRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVA  275 (527)
T ss_pred             eccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEE
Confidence            6542111                               11 122343  3455555422     2           5778


Q ss_pred             EECCCCcEEEEecccCccE-----------EEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEe---------ee-
Q psy9182         299 WDVNTGEMVNTLIHHCEAV-----------LHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRV---------LV-  354 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i-----------~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~-  354 (486)
                      .|++||+....++.....+           ..+...+.   .++.+..+|.+++.|-++++.+.....         .. 
T Consensus       276 ld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~  355 (527)
T TIGR03075       276 RDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDL  355 (527)
T ss_pred             EccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCC
Confidence            8999999988776422211           22222333   677899999999999998876411000         00 


Q ss_pred             --c---------------CcccE-------------EEEEeCCCEEEEEeC-----------------------------
Q psy9182         355 --G---------------HRAAV-------------NVVDFDEKYIVSASG-----------------------------  375 (486)
Q Consensus       355 --~---------------~~~~v-------------~~~~~~~~~l~~~~~-----------------------------  375 (486)
                        +               ....+             .++..+..+++....                             
T Consensus       356 ~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~  435 (527)
T TIGR03075       356 KTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPP  435 (527)
T ss_pred             CCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCC
Confidence              0               00000             011111222222111                             


Q ss_pred             ----CCcEEEEECCCceEEEEEcCCcccEE-EEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182         376 ----DRTIKVWNTSSCEFVRTLNGHKRGIA-CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       376 ----d~~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                          -|.|.-+|+.+++..-+.+....... .+...+.+++.++.||.++.+|.++|+.+..++-.
T Consensus       436 ~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       436 PDDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             CCCCceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence                24577788888877766653222111 13335667777888899999999999888877654

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.29  E-value=0.002  Score=55.61  Aligned_cols=218  Identities=11%  Similarity=0.125  Sum_probs=118.7

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCc--eeeEEEcCCcc---cEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSL--QCIKVLTGHTG---SVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~---~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~  311 (486)
                      +++.+|+.||+- .|..|.|-..+..  ..+.....+.+   .=.-++|  |+..||.+...|+|+++|+.. ..+..+.
T Consensus         4 ~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~   81 (282)
T PF15492_consen    4 ALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIP   81 (282)
T ss_pred             eecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcC
Confidence            345567666654 5667777654431  22222222221   1244555  899999999999999999874 4443442


Q ss_pred             cc-------CccEEEEEEcC--------CeEEEEeCCCcEEEEECCCC--Cce---eeEEeeecCcccEEEEEeC--CCE
Q psy9182         312 HH-------CEAVLHLRFSN--------GMMVTCSKDRSIAVWDMVSP--NEI---TLRRVLVGHRAAVNVVDFD--EKY  369 (486)
Q Consensus       312 ~~-------~~~i~~~~~~~--------~~l~~~~~dg~i~i~d~~~~--~~~---~~~~~~~~~~~~v~~~~~~--~~~  369 (486)
                      ..       ...|..+.|.+        ..|++-..+|.++-|-+..+  +..   ..+.........|.++.++  .++
T Consensus        82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~L  161 (282)
T PF15492_consen   82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRL  161 (282)
T ss_pred             cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCE
Confidence            21       24566666642        16777788888888876332  221   2222233356788888883  356


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe-C--CCEE-EEEeCCCc------EEEEECCCCeeeEEecCcccC
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-R--DRLV-VSGSSDNT------IRLWDIECGACLRVLEGHEEL  439 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~--~~~l-~~~~~dg~------v~iwd~~~~~~~~~~~~h~~~  439 (486)
                      |++|+....      +++.    -.+...++++... +  +.+. ++...|+.      -.+|.+-+.+.........+.
T Consensus       162 LlVgG~~~~------~~~~----s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~  231 (282)
T PF15492_consen  162 LLVGGCEQN------QDGM----SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDG  231 (282)
T ss_pred             EEEeccCCC------CCcc----ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCc
Confidence            666654322      0000    1122223333322 1  2222 12222221      234444333322222334567


Q ss_pred             eEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         440 VRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       440 v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      |..|..  ||+.||+...+|.|.+|++.+-.
T Consensus       232 i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~  262 (282)
T PF15492_consen  232 IFKMSLSPDGSLLACIHFSGSLSLWEIPSLR  262 (282)
T ss_pred             eEEEEECCCCCEEEEEEcCCeEEEEecCcch
Confidence            776666  99999999999999999998743

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.28  E-value=3.9e-06  Score=50.17  Aligned_cols=37  Identities=41%  Similarity=0.873  Sum_probs=33.7

Q ss_pred             ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEE
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD  300 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd  300 (486)
                      ++++..+.+|.+.|.++++  ++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4678899999999999999  678999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.28  E-value=0.00046  Score=59.33  Aligned_cols=197  Identities=13%  Similarity=0.149  Sum_probs=105.5

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC-------CcccEEEEEe-c-------CCEEEEEeCCCcEEEEE
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-------HTGSVLCLQY-D-------ERVIISGSSDSTVRVWD  300 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~-~-------~~~l~~~~~dg~i~vwd  300 (486)
                      .-+++++|+..||.+...|+|++||+...+.. .+..       -...|..+.| +       ...|++-..+|.++-|-
T Consensus        47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~  125 (282)
T PF15492_consen   47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL  125 (282)
T ss_pred             eEEEECCCCcEEEEEcCCCeEEEEecccceeE-EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE
Confidence            35688999999999999999999998764433 3322       1234555555 1       22566677788888777


Q ss_pred             CCC-----CcEEEEecc---cCccEEEEEEcCC--eEEEEeCCCc-EEEEECCCCCceeeEEeeecCcccEEEEEeCCCE
Q psy9182         301 VNT-----GEMVNTLIH---HCEAVLHLRFSNG--MMVTCSKDRS-IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY  369 (486)
Q Consensus       301 ~~~-----~~~~~~~~~---~~~~i~~~~~~~~--~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  369 (486)
                      +..     .+..+.+..   ....|.++.++++  +|++|+.... -.... ....-+...+.+.+..........+...
T Consensus       126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~-a~~~GLtaWRiL~~~Pyyk~v~~~~~~~  204 (282)
T PF15492_consen  126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSK-ASSCGLTAWRILSDSPYYKQVTSSEDDI  204 (282)
T ss_pred             EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCcccc-ccccCceEEEEcCCCCcEEEccccCccc
Confidence            532     233344432   4668999999876  5555543221 00000 0000011111111111111100111111


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcccEE--EEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE  437 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~  437 (486)
                      -....   +..+|.+-+.+...........|.  +++++|..||+...+|.|.+|++.+-++.+.+..++
T Consensus       205 ~~~~~---~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e  271 (282)
T PF15492_consen  205 TASSK---RRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE  271 (282)
T ss_pred             ccccc---ccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence            11111   122333333332222222334454  455679999999999999999999887777765443

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.25  E-value=0.003  Score=57.21  Aligned_cols=243  Identities=14%  Similarity=0.182  Sum_probs=130.8

Q ss_pred             CccCcceEEEeecCceeeecccc-cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeec
Q psy9182         112 PNFDEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF  190 (486)
Q Consensus       112 ~s~~~~~l~tg~~dg~v~iWd~~-~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~  190 (486)
                      ....++.|+.|..+| +.+++.. ..+..+..+.  ..|..+...+               +-+.++.- .|+.+.++++
T Consensus         3 ~~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~--~~I~ql~vl~---------------~~~~llvL-sd~~l~~~~L   63 (275)
T PF00780_consen    3 ADSWGDRLLVGTEDG-LYVYDLSDPSKPTRILKL--SSITQLSVLP---------------ELNLLLVL-SDGQLYVYDL   63 (275)
T ss_pred             cccCCCEEEEEECCC-EEEEEecCCccceeEeec--ceEEEEEEec---------------ccCEEEEE-cCCccEEEEc
Confidence            344688999999998 8999883 2333333322  2377776643               22222222 2489999998


Q ss_pred             ccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEE----eCCCEEEEEecCCeEEEEECCCc--
Q psy9182         191 LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQ----YDDHKIVSGLRDNTIKVWDRVSL--  264 (486)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~dg~i~i~d~~~~--  264 (486)
                      ............. ..            ....    ..........+..+.    ..+...++......|.+|.....  
T Consensus        64 ~~l~~~~~~~~~~-~~------------~~~~----~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~  126 (275)
T PF00780_consen   64 DSLEPVSTSAPLA-FP------------KSRS----LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRN  126 (275)
T ss_pred             hhhcccccccccc-cc------------cccc----ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcc
Confidence            6644332111000 00            0000    000001112222222    23334444445558888876542  


Q ss_pred             ---eeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEeccc------------CccEEEEEEcCCeEEE
Q psy9182         265 ---QCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHH------------CEAVLHLRFSNGMMVT  329 (486)
Q Consensus       265 ---~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~------------~~~i~~~~~~~~~l~~  329 (486)
                         +..+.+. -...+.++.|-++.++.|..++ ..+.|+.++.....+...            ..++..+...++.++.
T Consensus       127 ~f~~~~ke~~-lp~~~~~i~~~~~~i~v~~~~~-f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll  204 (275)
T PF00780_consen  127 SFSKLLKEIS-LPDPPSSIAFLGNKICVGTSKG-FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLL  204 (275)
T ss_pred             cccceeEEEE-cCCCcEEEEEeCCEEEEEeCCc-eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEE
Confidence               3455555 3467888999888888888665 888999977665443211            1234445555455555


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  397 (486)
                      +..+ .-.+.|.. ++... ...+ .-.....++.+...++++.+. +.|.||++.++++++.+....
T Consensus       205 ~~~~-~g~fv~~~-G~~~r-~~~i-~W~~~p~~~~~~~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~~  267 (275)
T PF00780_consen  205 CYDN-IGVFVNKN-GEPSR-KSTI-QWSSAPQSVAYSSPYLIAFSS-NSIEVRSLETGELVQTIPLPN  267 (275)
T ss_pred             Eecc-eEEEEcCC-CCcCc-ccEE-EcCCchhEEEEECCEEEEECC-CEEEEEECcCCcEEEEEECCC
Confidence            4433 33333433 32221 0111 112345566667777777766 459999999998888877543

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF12125 Beta-TrCP_D: D domain of beta-TrCP; InterPro: IPR021977 This domain is found in eukaryotes, and is approximately 40 amino acids in length

Probab=98.19  E-value=1.2e-06  Score=49.43  Aligned_cols=40  Identities=78%  Similarity=1.434  Sum_probs=34.6

Q ss_pred             HHHhccCChhhHHHHHHHHHHhhccCCchhhhhhhccccc
Q psy9182          65 FKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQ  104 (486)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (486)
                      ++.|.+|+...|.+++++++.++|++++++++.+++|+++
T Consensus         1 ~~~F~~Wse~eQvdFVe~Ll~rM~H~Qhg~In~fL~PmLQ   40 (40)
T PF12125_consen    1 VEYFDKWSESEQVDFVEQLLSRMCHYQHGQINAFLKPMLQ   40 (40)
T ss_dssp             HHHHTTS-HHHHHHHHHHHHHTS-HHHHHHHHHHHGGGC-
T ss_pred             CchhhccCchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhC
Confidence            3578899999999999999999999999999999999864

It is found associated with PF00646 from PFAM, PF00400 from PFAM. The protein that contains this domain functions as a ubiquitin ligase. Ubiquitination is required to direct proteins towards the proteasome for degradation. This protein is part of the WD40 class of F box proteins. The D domain of these F box proteins is involved in mediating the dimerisation of the protein. Dimerisation is necessary to polyubiquitinate substrates so this D domain is vital in directing substrates towards the proteasome for degradation. ; PDB: 2P64_A 1P22_A.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.17  E-value=0.0045  Score=55.16  Aligned_cols=280  Identities=12%  Similarity=0.199  Sum_probs=155.0

Q ss_pred             Cceeeeccccc--ccc-eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC---CCcceeeeccccccccc
Q psy9182         125 DRTIKVWNTSS--CEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---DDTILIWDFLNYSETPI  198 (486)
Q Consensus       125 dg~v~iWd~~~--~~~-~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---dg~i~vWd~~~~~~~~~  198 (486)
                      ++-|++|++.+  |++ ...+-.+.+..+.+++++               +.+.|.++..   +|.|..+.++...    
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~---------------~~~~LY~v~~~~~~ggvaay~iD~~~----   75 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNP---------------DQRHLYVVNEPGEEGGVAAYRIDPDD----   75 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECC---------------CCCEEEEEEecCCcCcEEEEEEcCCC----
Confidence            57899999874  222 222334556778888873               3333433332   4666666654310    


Q ss_pred             CCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCeEEEEECCC-ceee---EEEcCC
Q psy9182         199 QGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDRVS-LQCI---KVLTGH  273 (486)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~-~~~~---~~~~~~  273 (486)
                                           +....-......+....-++++.++++++++.. .|.|.++-+.. |...   ..+ .|
T Consensus        76 ---------------------G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~-~h  133 (346)
T COG2706          76 ---------------------GRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVV-KH  133 (346)
T ss_pred             ---------------------CeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeee-ec
Confidence                                 111111111222344456778889988887764 57899998755 3322   222 23


Q ss_pred             ccc----------EEEEEe--cCCEEEEEeC-CCcEEEEECCCCcEEEEe---cccCccEEEEEEcCC--e-EEEEeCCC
Q psy9182         274 TGS----------VLCLQY--DERVIISGSS-DSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFSNG--M-MVTCSKDR  334 (486)
Q Consensus       274 ~~~----------v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~~~--~-l~~~~~dg  334 (486)
                      .+.          +.+..+  ++++|++... -..|.+|++..|.....-   ......-..+.|+|+  + .++.--++
T Consensus       134 ~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s  213 (346)
T COG2706         134 TGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS  213 (346)
T ss_pred             CCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCC
Confidence            333          444444  7888887754 246999999977653321   133455688999876  3 33445689


Q ss_pred             cEEEEECCCC-CceeeEEeee----c--CcccEEEEEe--CCCEEEEEeC-CCcEEEEECCC--ceE--EEEEcCCcccE
Q psy9182         335 SIAVWDMVSP-NEITLRRVLV----G--HRAAVNVVDF--DEKYIVSASG-DRTIKVWNTSS--CEF--VRTLNGHKRGI  400 (486)
Q Consensus       335 ~i~i~d~~~~-~~~~~~~~~~----~--~~~~v~~~~~--~~~~l~~~~~-d~~i~iwd~~~--~~~--~~~~~~~~~~v  400 (486)
                      +|.+|..... ......+...    .  ......++..  ||++|.++.. ...|.+|.+..  +++  +.....+...-
T Consensus       214 tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~P  293 (346)
T COG2706         214 TVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFP  293 (346)
T ss_pred             EEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCC
Confidence            9999998774 2222222111    1  1223334444  9999998864 33677776543  332  22223333334


Q ss_pred             EEEEe--CCCEEEEEeCC-CcEEEEEC--CCCeeeEEec-CcccCeEEEEe
Q psy9182         401 ACLQY--RDRLVVSGSSD-NTIRLWDI--ECGACLRVLE-GHEELVRCIRF  445 (486)
Q Consensus       401 ~~~~~--~~~~l~~~~~d-g~v~iwd~--~~~~~~~~~~-~h~~~v~~~~~  445 (486)
                      +.+.+  ++++|+++..+ ..|.+|.+  ++|++-.... .......||.|
T Consensus       294 R~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f  344 (346)
T COG2706         294 RDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKF  344 (346)
T ss_pred             ccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEE
Confidence            44444  58888887764 56888866  4555433322 22334445554

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.16  E-value=0.0041  Score=55.99  Aligned_cols=197  Identities=12%  Similarity=0.113  Sum_probs=110.9

Q ss_pred             EEEEeCCCEEEEEe--cCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC-CCcEEEEe----
Q psy9182         238 YCLQYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN-TGEMVNTL----  310 (486)
Q Consensus       238 ~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~----  310 (486)
                      ..++.+++++++..  -.-.|.|.|+..++.+..+... +...-.-..+..+.+-|.||.+.-..+. .|+...+.    
T Consensus       100 ~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P-GC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F  178 (342)
T PF06433_consen  100 FALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP-GCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVF  178 (342)
T ss_dssp             EEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT-SEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEES
T ss_pred             eEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC-CEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeecccc
Confidence            34455555555433  3347889999999998887632 2222222245678888999999998887 55554322    


Q ss_pred             cccCccEE-EEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEee-----------ecCcccEEEEEeCCCEEEEEeC-
Q psy9182         311 IHHCEAVL-HLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVL-----------VGHRAAVNVVDFDEKYIVSASG-  375 (486)
Q Consensus       311 ~~~~~~i~-~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~l~~~~~-  375 (486)
                      .....++. .-.+.  ++.++-.+.+|.|+-.|+............           ....-.+.++....+.|++--. 
T Consensus       179 ~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~  258 (342)
T PF06433_consen  179 DPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQ  258 (342)
T ss_dssp             STTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE
T ss_pred             CCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecC
Confidence            11122222 22222  346777889999999998766532111110           0111233444443344333221 


Q ss_pred             --CC-------cEEEEECCCceEEEEEcCCcccEEEEEe--C-CCEEEEE-eCCCcEEEEECCCCeeeEEecCc
Q psy9182         376 --DR-------TIKVWNTSSCEFVRTLNGHKRGIACLQY--R-DRLVVSG-SSDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       376 --d~-------~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                        ++       .|-++|+.+++.+.++... ..+.++..  + ..+|++. ..++.+.+||..+|+.++.++.-
T Consensus       259 g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l  331 (342)
T PF06433_consen  259 GGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL  331 (342)
T ss_dssp             --TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred             CCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence              11       3778899999999998842 23444544  3 3456544 46899999999999999988743

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.16  E-value=0.00017  Score=62.27  Aligned_cols=226  Identities=14%  Similarity=0.303  Sum_probs=136.8

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCce-----eeEEEcCCc------------ccEEEEEe----cCCEEEEEeCCCcEEE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQ-----CIKVLTGHT------------GSVLCLQY----DERVIISGSSDSTVRV  298 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~------------~~v~~~~~----~~~~l~~~~~dg~i~v  298 (486)
                      +...|.++++|...|.|.+|.-....     ....+++|.            ..|..+.|    .-..++..+.|.+|++
T Consensus        34 fd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNdktiKl  113 (460)
T COG5170          34 FDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTNDKTIKL  113 (460)
T ss_pred             eccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCCceeee
Confidence            34467899999999999999754422     233455554            23567777    2246677788999999


Q ss_pred             EECCCCcE---------------------------EEEe----------------cccCccEEEEEEcCC-eEEEEeCCC
Q psy9182         299 WDVNTGEM---------------------------VNTL----------------IHHCEAVLHLRFSNG-MMVTCSKDR  334 (486)
Q Consensus       299 wd~~~~~~---------------------------~~~~----------------~~~~~~i~~~~~~~~-~l~~~~~dg  334 (486)
                      |.+.....                           +..+                ..|.-.+.++.++.+ ..+....|-
T Consensus       114 WKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSaDdL  193 (460)
T COG5170         114 WKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSADDL  193 (460)
T ss_pred             eeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeeccce
Confidence            98753310                           0000                123444567777654 555566788


Q ss_pred             cEEEEECCCCCceeeEEeeecC-----cccEEEEEe---CCCEEEEEeCCCcEEEEECCCceE------EEE--------
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGH-----RAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEF------VRT--------  392 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~-----~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~------~~~--------  392 (486)
                      .|.+|++.-............|     ...|++..|   ..+.+.-.+..|.|++-|++...+      +..        
T Consensus       194 rINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~  273 (460)
T COG5170         194 RINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDV  273 (460)
T ss_pred             eeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccc
Confidence            8999998765432222222222     234556666   345666677889999999984321      111        


Q ss_pred             --EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-CeeeEEecCcc------------cCeE---EEEe--cCCEE
Q psy9182         393 --LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHE------------ELVR---CIRF--DAKRI  450 (486)
Q Consensus       393 --~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~h~------------~~v~---~~~~--~~~~l  450 (486)
                        +..-...|..+.|  +|+++++-+ =-+|+|||.+. ..++.++.-|.            +.|.   -+.|  |...+
T Consensus       274 ~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v  352 (460)
T COG5170         274 DFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHV  352 (460)
T ss_pred             hhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccc
Confidence              1122234566666  467777654 46899999975 35666665442            2332   3455  66778


Q ss_pred             EEEeCCCcEEEEeCCC
Q psy9182         451 VSGAYDGKIKVWNLVA  466 (486)
Q Consensus       451 ~s~~~dg~v~iwdl~~  466 (486)
                      ++|+..+..-++-+.+
T Consensus       353 ~sgsy~NNfgiyp~~s  368 (460)
T COG5170         353 LSGSYSNNFGIYPTDS  368 (460)
T ss_pred             cccccccceeeecccc
Confidence            8888877777776544

>KOG4649|consensus

Probab=98.15  E-value=0.0013  Score=55.67  Aligned_cols=140  Identities=12%  Similarity=0.074  Sum_probs=93.9

Q ss_pred             CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEE-EcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEE
Q psy9182         284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR-FSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV  362 (486)
Q Consensus       284 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~  362 (486)
                      ..+++.|+..+.+.-.|..+|+++.+-.. ...+.+-+ .-+++++.|+..|.+++.+..++.......... .-..-..
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~-~vk~~a~  100 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE-TVKVRAQ  100 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehh-hhccceE
Confidence            46888899999999999999988765432 22333222 257889999999999999999997654333322 2222235


Q ss_pred             EEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE--EEEEeCCCEEEEEeCCCcEEEEECC
Q psy9182         363 VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       363 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~v~iwd~~  425 (486)
                      +++++..+..|+.|++.+..|.++..++...+...+.-  .++......|..+...|.|.--..+
T Consensus       101 ~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~  165 (354)
T KOG4649|consen  101 CDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKN  165 (354)
T ss_pred             EcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccC
Confidence            67799999999999999999999988888866433221  2333323334444444544433333

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.14  E-value=0.0037  Score=61.77  Aligned_cols=226  Identities=13%  Similarity=0.099  Sum_probs=133.7

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCC--c--ccEEE-EEecCCEEEEEeC------CCcEEEEECCCCcEEEEec
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH--T--GSVLC-LQYDERVIISGSS------DSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~--~~v~~-~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~  311 (486)
                      .+..++.++.++.|..+|..+|+.+......  .  ..+.+ -...+..++++..      +|.|..+|.++|+.+..+.
T Consensus       119 ~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~  198 (527)
T TIGR03075       119 YDGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY  198 (527)
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence            4567788889999999999999998766531  1  11211 1123345555543      6899999999999887753


Q ss_pred             ccCcc-------------------------------E-EEEEEcC--CeEEEEeCC-----C-----------cEEEEEC
Q psy9182         312 HHCEA-------------------------------V-LHLRFSN--GMMVTCSKD-----R-----------SIAVWDM  341 (486)
Q Consensus       312 ~~~~~-------------------------------i-~~~~~~~--~~l~~~~~d-----g-----------~i~i~d~  341 (486)
                      .....                               + ..+++++  ++++.+..+     +           .|.-.|+
T Consensus       199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~  278 (527)
T TIGR03075       199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP  278 (527)
T ss_pred             CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence            32110                               0 1223443  356655522     2           5677788


Q ss_pred             CCCCceeeEEeeecCc-------c--cEEEEEeCCC---EEEEEeCCCcEEEEECCCceEEEE--------E----cCCc
Q psy9182         342 VSPNEITLRRVLVGHR-------A--AVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRT--------L----NGHK  397 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~-------~--~v~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~--------~----~~~~  397 (486)
                      ++++..-.++. ..|.       .  .+..+..+|+   .++.+..+|.+++.|.++|+++..        +    ....
T Consensus       279 ~TG~~~W~~Q~-~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~  357 (527)
T TIGR03075       279 DTGKIKWHYQT-TPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKT  357 (527)
T ss_pred             ccCCEEEeeeC-CCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCC
Confidence            88876543332 2221       1  1122223665   788899999999999999988622        1    0000


Q ss_pred             ------------------ccE-----------EEEEeC--CCEEEEEe--------------------------------
Q psy9182         398 ------------------RGI-----------ACLQYR--DRLVVSGS--------------------------------  414 (486)
Q Consensus       398 ------------------~~v-----------~~~~~~--~~~l~~~~--------------------------------  414 (486)
                                        ..+           ..++++  ..++....                                
T Consensus       358 g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~  437 (527)
T TIGR03075       358 GRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPD  437 (527)
T ss_pred             CCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCC
Confidence                              000           001111  11221111                                


Q ss_pred             -CCCcEEEEECCCCeeeEEecCcccCeEE-EEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         415 -SDNTIRLWDIECGACLRVLEGHEELVRC-IRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       415 -~dg~v~iwd~~~~~~~~~~~~h~~~v~~-~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                       .-|.|.-+|+.+|+.+...........+ +.-.+..++.++.||.++.+|.++++.
T Consensus       438 ~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~  494 (527)
T TIGR03075       438 DHMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEE  494 (527)
T ss_pred             CCceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCE
Confidence             1256888999999888876543222222 334667788888899999999999864

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG0882|consensus

Probab=98.12  E-value=2.8e-05  Score=70.43  Aligned_cols=228  Identities=19%  Similarity=0.227  Sum_probs=150.4

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCC---ceeeEEEcCCcccEEEEE--ecCCEEEEEeC-CCcEEEEECCCCcEEEEec--
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVS---LQCIKVLTGHTGSVLCLQ--YDERVIISGSS-DSTVRVWDVNTGEMVNTLI--  311 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~--  311 (486)
                      +....+++.+++.||.++.|.-..   -+.++.+..|...|.++.  .++.++.+.+. |..++++|+++-.++.-++  
T Consensus        16 ~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~   95 (558)
T KOG0882|consen   16 FPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLV   95 (558)
T ss_pred             eeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccc
Confidence            344678899999999999997443   244555667777776554  48888888777 9999999998776553332  


Q ss_pred             ccCccEEEEEEcCC----eEEE-EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         312 HHCEAVLHLRFSNG----MMVT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       312 ~~~~~i~~~~~~~~----~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      .-...+. +..+++    .+++ ...++.+.++|-...... ......-|..+|..+.+  .+..+++....|.|.-|..
T Consensus        96 ~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q-~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~  173 (558)
T KOG0882|consen   96 DLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQ-DGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSA  173 (558)
T ss_pred             cCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcCc-cceecccccCceEEEEeeccccceeeccccceeEeecC
Confidence            2222232 223333    4443 346789999997765432 22334467888888888  5677888888899999997


Q ss_pred             CC------ceEEEEEc---------CCcccEEE--EEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC------------
Q psy9182         385 SS------CEFVRTLN---------GHKRGIAC--LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG------------  435 (486)
Q Consensus       385 ~~------~~~~~~~~---------~~~~~v~~--~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------------  435 (486)
                      ..      .+....++         .......+  +++++..+.+-+.|..|++++.++|+.++.+..            
T Consensus       174 e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~  253 (558)
T KOG0882|consen  174 EGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSP  253 (558)
T ss_pred             CCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccc
Confidence            72      11111111         11222344  444689999999999999999999887655421            


Q ss_pred             --------------------ccc-CeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         436 --------------------HEE-LVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       436 --------------------h~~-~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                                          |.. .-+.+.|  .+++|+-|+-=| |++.++.+..-.
T Consensus       254 y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~  310 (558)
T KOG0882|consen  254 YGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVV  310 (558)
T ss_pred             cccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEE
Confidence                                111 2234556  678888777666 888888876433

>KOG2114|consensus

Probab=98.12  E-value=0.00047  Score=67.87  Aligned_cols=206  Identities=12%  Similarity=0.157  Sum_probs=123.9

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccc-eeEEEeec--ceeEecCCCCceeccCcceeecCCCC
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-IACLQYRD--RLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~-V~~~~~~~--~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ++.|+  ++.+..++.|+.+|.|.+.+-. -+.++.++++... |..+....  +.+++.+.|+..            .-
T Consensus        27 ~isc~--~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~------------np   91 (933)
T KOG2114|consen   27 AISCC--SSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQG------------NP   91 (933)
T ss_pred             ceeEE--cCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCC------------Cc
Confidence            44444  4568899999999999887654 3455778887777 44444432  244444433321            01


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEE-EeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQR-INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      -.+++|+++.......+...                 ....+.. .......+..+++++-+-+.+|+|-.+|.|..+.-
T Consensus        92 ~llkiw~lek~~~n~sP~c~-----------------~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~G  154 (933)
T KOG2114|consen   92 VLLKIWDLEKVDKNNSPQCL-----------------YEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKG  154 (933)
T ss_pred             eEEEEecccccCCCCCccee-----------------eeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcC
Confidence            15899998664321110000                 0000111 11123456667788888899999999999999842


Q ss_pred             C----CceeeEEEcCCcccEEEEEe--cCCE-EEEEeCCCcEEEEECCCCcE-EEEecccCccEEEEEEcCC-eEEEEeC
Q psy9182         262 V----SLQCIKVLTGHTGSVLCLQY--DERV-IISGSSDSTVRVWDVNTGEM-VNTLIHHCEAVLHLRFSNG-MMVTCSK  332 (486)
Q Consensus       262 ~----~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~i~~~~~~~~-~l~~~~~  332 (486)
                      +    .+..........++|+.+.+  ++.. +++++ -..|.+|.+....+ ...+..+.....|..+++. .-+.++.
T Consensus       155 Di~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~T-t~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~  233 (933)
T KOG2114|consen  155 DILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVAT-TEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG  233 (933)
T ss_pred             cchhccccceeeeccCCCCceeeEEecCCceeEEEEe-cceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec
Confidence            1    12222222335678999988  6655 44444 34699999984442 4446778888899999865 3144445


Q ss_pred             CCcEEEEECCCC
Q psy9182         333 DRSIAVWDMVSP  344 (486)
Q Consensus       333 dg~i~i~d~~~~  344 (486)
                      +..+.+||....
T Consensus       234 ~e~l~fY~sd~~  245 (933)
T KOG2114|consen  234 SEFLYFYDSDGR  245 (933)
T ss_pred             CceEEEEcCCCc
Confidence            568999987643

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.11  E-value=0.0046  Score=55.96  Aligned_cols=218  Identities=13%  Similarity=0.204  Sum_probs=126.3

Q ss_pred             EEeCCCEEEEEecCCeEEEEECC-CceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-------
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRV-SLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-------  309 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-------  309 (486)
                      ....++.|+.|+.+| +.+++.. .....+...  ...|..+..  +-+.+++- .|+.+.++++..-.....       
T Consensus         3 ~~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~~   78 (275)
T PF00780_consen    3 ADSWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAFP   78 (275)
T ss_pred             cccCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEE-cCCccEEEEchhhcccccccccccc
Confidence            345678899999998 8999983 333333332  223777766  33444444 359999999875443331       


Q ss_pred             -------ecccCccEEEEE----EcCCeEEEEeCCCcEEEEECCCCCc-e-eeEEeeecCcccEEEEEeCCCEEEEEeCC
Q psy9182         310 -------LIHHCEAVLHLR----FSNGMMVTCSKDRSIAVWDMVSPNE-I-TLRRVLVGHRAAVNVVDFDEKYIVSASGD  376 (486)
Q Consensus       310 -------~~~~~~~i~~~~----~~~~~l~~~~~dg~i~i~d~~~~~~-~-~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  376 (486)
                             .......+..++    ..+...++......|.+|....... . ...+. ..-...+..+.|-++.++.|..+
T Consensus        79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke-~~lp~~~~~i~~~~~~i~v~~~~  157 (275)
T PF00780_consen   79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKE-ISLPDPPSSIAFLGNKICVGTSK  157 (275)
T ss_pred             ccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEE-EEcCCCcEEEEEeCCEEEEEeCC
Confidence                   111223344444    1123444455556899988876421 1 12222 22346778888888888888765


Q ss_pred             CcEEEEECCCceEEEEEcCC------------cccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeE--EecCcccCeE
Q psy9182         377 RTIKVWNTSSCEFVRTLNGH------------KRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLR--VLEGHEELVR  441 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~------------~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~h~~~v~  441 (486)
                       ...+.|+.++.....+...            ..++..+..+ +.+|++ . |..-.+.|. .|+..+  .+.= ...+.
T Consensus       158 -~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~-~-~~~g~fv~~-~G~~~r~~~i~W-~~~p~  232 (275)
T PF00780_consen  158 -GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC-Y-DNIGVFVNK-NGEPSRKSTIQW-SSAPQ  232 (275)
T ss_pred             -ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE-e-cceEEEEcC-CCCcCcccEEEc-CCchh
Confidence             4788899876654433211            1245555555 444443 3 333333343 455443  2221 23566


Q ss_pred             EEEecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         442 CIRFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       442 ~~~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++++...+|+..+.++ |.||++.++.
T Consensus       233 ~~~~~~pyli~~~~~~-iEV~~~~~~~  258 (275)
T PF00780_consen  233 SVAYSSPYLIAFSSNS-IEVRSLETGE  258 (275)
T ss_pred             EEEEECCEEEEECCCE-EEEEECcCCc
Confidence            7888778888877644 9999999763

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.10  E-value=0.0038  Score=58.89  Aligned_cols=217  Identities=10%  Similarity=0.131  Sum_probs=121.2

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCce-------------------------------------------eeEEEcCCc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQ-------------------------------------------CIKVLTGHT  274 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------------------------------------------~~~~~~~~~  274 (486)
                      +.++++...|++|...|.|.+|.....+                                           +...+....
T Consensus         7 vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~~~   86 (395)
T PF08596_consen    7 VSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLDAKQ   86 (395)
T ss_dssp             EEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE---S
T ss_pred             EEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhheeccC
Confidence            4556677889999999998888532111                                           111223346


Q ss_pred             ccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEec--c------cCccEEEEEEc-----CC-----eEEEEeCCCc
Q psy9182         275 GSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLI--H------HCEAVLHLRFS-----NG-----MMVTCSKDRS  335 (486)
Q Consensus       275 ~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~------~~~~i~~~~~~-----~~-----~l~~~~~dg~  335 (486)
                      ++|++++. |=.++++|..+|.+.|.|++....+..-.  .      ....++++.|.     ++     .+++|+..|.
T Consensus        87 g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~  166 (395)
T PF08596_consen   87 GPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGN  166 (395)
T ss_dssp             -SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSE
T ss_pred             CcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCC
Confidence            77888888 66899999999999999999887776532  1      23457777775     22     7899999999


Q ss_pred             EEEEECCC-C-Cce--eeEEeeecCcccEEEEEe-C---C-------------------CEEEEEeCCCcEEEEECCCce
Q psy9182         336 IAVWDMVS-P-NEI--TLRRVLVGHRAAVNVVDF-D---E-------------------KYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       336 i~i~d~~~-~-~~~--~~~~~~~~~~~~v~~~~~-~---~-------------------~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      +.+|.+.- . ...  ........+...+..+.. +   |                   .-++....+..++++...+.+
T Consensus       167 v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k  246 (395)
T PF08596_consen  167 VLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSK  246 (395)
T ss_dssp             EEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---
T ss_pred             EEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCCCc
Confidence            99998752 1 111  111111234455554443 1   0                   123444456789999998887


Q ss_pred             EEEEEcCCcccEEEEEe-------CCCEEEEEeCCCcEEEEECCCCeeeEEecCcc----cCeE--EEEecCCEEEEEe
Q psy9182         389 FVRTLNGHKRGIACLQY-------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHE----ELVR--CIRFDAKRIVSGA  454 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~-------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~----~~v~--~~~~~~~~l~s~~  454 (486)
                      ..+........+..+.+       .+..|++-..+|.|++|.+..-+.+..+.-+.    ..+.  ++..+|+.++-.+
T Consensus       247 ~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~g  325 (395)
T PF08596_consen  247 GAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTG  325 (395)
T ss_dssp             EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-S
T ss_pred             ccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEEEEeC
Confidence            76655433222222222       36678888899999999999888887776532    1222  3333777665554

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.04  E-value=0.0081  Score=53.33  Aligned_cols=205  Identities=14%  Similarity=0.054  Sum_probs=122.9

Q ss_pred             EEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc---
Q psy9182         239 CLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH---  312 (486)
Q Consensus       239 ~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---  312 (486)
                      ++.+ ++.++++-...+.|..|+..+++...... ..  ...+.+  .+..++.+...+ +.++|..+++.......   
T Consensus         6 ~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~-~~--~~G~~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~   81 (246)
T PF08450_consen    6 VWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDL-PG--PNGMAFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLPDG   81 (246)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTTTEEEEEES-SS--EEEEEEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEETT
T ss_pred             EEECCCCEEEEEEcCCCEEEEEECCCCeEEEEec-CC--CceEEEEccCCEEEEEEcCc-eEEEecCCCcEEEEeeccCC
Confidence            3444 45566666678899999998876644222 22  344444  356666666654 66669998865444332   


Q ss_pred             --cCccEEEEEEcCC-eEEEEe-CC--------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCC
Q psy9182         313 --HCEAVLHLRFSNG-MMVTCS-KD--------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDR  377 (486)
Q Consensus       313 --~~~~i~~~~~~~~-~l~~~~-~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~  377 (486)
                        .......+++.++ .++++. ..        |.|..++.. ++...    ....-...+.+.+  +++.|+ +-+..+
T Consensus        82 ~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~----~~~~~~~pNGi~~s~dg~~lyv~ds~~~  156 (246)
T PF08450_consen   82 GVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV----VADGLGFPNGIAFSPDGKTLYVADSFNG  156 (246)
T ss_dssp             CSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE----EEEEESSEEEEEEETTSSEEEEEETTTT
T ss_pred             CcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE----EecCcccccceEECCcchheeecccccc
Confidence              3455677888754 344443 22        457777766 33211    1112233445555  787665 556778


Q ss_pred             cEEEEECCC--c-----eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---
Q psy9182         378 TIKVWNTSS--C-----EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---  445 (486)
Q Consensus       378 ~i~iwd~~~--~-----~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---  445 (486)
                      .|..+++..  .     +....+....+..-.+.++  |++.++....+.|.++|.+ |+.+..+......+++++|   
T Consensus       157 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~  235 (246)
T PF08450_consen  157 RIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGP  235 (246)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEEST
T ss_pred             eeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECC
Confidence            899998853  2     1122222222235556664  7887777789999999988 9988888776668999999   


Q ss_pred             cCCEEEEE
Q psy9182         446 DAKRIVSG  453 (486)
Q Consensus       446 ~~~~l~s~  453 (486)
                      +.+.|+..
T Consensus       236 ~~~~L~vT  243 (246)
T PF08450_consen  236 DGKTLYVT  243 (246)
T ss_dssp             TSSEEEEE
T ss_pred             CCCEEEEE
Confidence            54555443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1645|consensus

Probab=98.04  E-value=0.00022  Score=63.86  Aligned_cols=91  Identities=14%  Similarity=0.270  Sum_probs=76.2

Q ss_pred             EEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC---CeEEE
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVT  329 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~  329 (486)
                      +++.+..+.+....+.++...|..+++   +..++..++.+..|+|.|+++...+..+..+ ..+.+.+|+-   +.+++
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa  253 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA  253 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence            777777777777777788888988888   3347888999999999999999988888776 7888999973   48999


Q ss_pred             EeCCCcEEEEECCCCCce
Q psy9182         330 CSKDRSIAVWDMVSPNEI  347 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~  347 (486)
                      |..+|.|.+||++..+..
T Consensus       254 Gl~nG~VlvyD~R~~~~~  271 (463)
T KOG1645|consen  254 GLQNGMVLVYDMRQPEGP  271 (463)
T ss_pred             eccCceEEEEEccCCCch
Confidence            999999999999987654

>PHA02713 hypothetical protein; Provisional

Probab=98.01  E-value=0.00041  Score=69.07  Aligned_cols=213  Identities=10%  Similarity=0.099  Sum_probs=121.0

Q ss_pred             eEEEEECCCceeeE--EEcCCcccEEEEEecCCEEEEEeCC------CcEEEEECCCCcEEEE--ecccCccEEEEEEcC
Q psy9182         255 TIKVWDRVSLQCIK--VLTGHTGSVLCLQYDERVIISGSSD------STVRVWDVNTGEMVNT--LIHHCEAVLHLRFSN  324 (486)
Q Consensus       255 ~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~--~~~~~~~i~~~~~~~  324 (486)
                      .+..||..+.+-..  .+......-.....++...+.|+.+      ..+..||..++.....  +.............+
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g  352 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDD  352 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECC
Confidence            56778877654322  1211111112233477777888754      3477899887653221  111112223334445


Q ss_pred             CeEEEEeCCC-----cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC----------------------
Q psy9182         325 GMMVTCSKDR-----SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR----------------------  377 (486)
Q Consensus       325 ~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~----------------------  377 (486)
                      ...+.|+.++     .+..||..+.+-. ....+.........+..++...+.|+.++                      
T Consensus       353 ~IYviGG~~~~~~~~sve~Ydp~~~~W~-~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~  431 (557)
T PHA02713        353 TIYAIGGQNGTNVERTIECYTMGDDKWK-MLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSS  431 (557)
T ss_pred             EEEEECCcCCCCCCceEEEEECCCCeEE-ECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccccccccc
Confidence            5667777654     4788998765321 11112222222334455888888887542                      


Q ss_pred             -cEEEEECCCceEE--EEEcCCcccEEEEEeCCCEEEEEeCC------CcEEEEECCC---CeeeEEecCcccCeEEEEe
Q psy9182         378 -TIKVWNTSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSD------NTIRLWDIEC---GACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       378 -~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d------g~v~iwd~~~---~~~~~~~~~h~~~v~~~~~  445 (486)
                       .+..||..+.+-.  ..+............++++.+.|+.+      ..+..||..+   .+.+..+.........+..
T Consensus       432 ~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~  511 (557)
T PHA02713        432 NKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH  511 (557)
T ss_pred             ceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE
Confidence             4778888775432  22222222333455678887888754      2467899876   3445555555555556666


Q ss_pred             cCCEEEEEeCCC--cEEEEeCCCCC
Q psy9182         446 DAKRIVSGAYDG--KIKVWNLVAAL  468 (486)
Q Consensus       446 ~~~~l~s~~~dg--~v~iwdl~~~~  468 (486)
                      +++..++||.||  .+..||..+.+
T Consensus       512 ~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        512 DNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             CCEEEEEeeecceeehhhcCccccc
Confidence            999999999998  77788877653

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.96  E-value=0.004  Score=59.64  Aligned_cols=182  Identities=12%  Similarity=0.087  Sum_probs=103.1

Q ss_pred             eEEEEeCCCE-EEEEecC---CeEEEEECCCceeeEEEcCCcccEEE--EEecCCEEEEE-eCC--CcEEEEECCCCcEE
Q psy9182         237 VYCLQYDDHK-IVSGLRD---NTIKVWDRVSLQCIKVLTGHTGSVLC--LQYDERVIISG-SSD--STVRVWDVNTGEMV  307 (486)
Q Consensus       237 v~~~~~~~~~-l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~-~~d--g~i~vwd~~~~~~~  307 (486)
                      .-.++|+|+. ++..+.+   ..|.++|+.+++...... ..+....  ++.||+.++.. +.+  ..|.++|+.+++..
T Consensus       192 ~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~  270 (419)
T PRK04043        192 FPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT  270 (419)
T ss_pred             eEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE
Confidence            4567889884 5543333   469999998887665543 3333333  44488766543 333  56888898877643


Q ss_pred             EEecccCccEEEEEEcCC--eEEEEe-CCC--cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC------
Q psy9182         308 NTLIHHCEAVLHLRFSNG--MMVTCS-KDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD------  376 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~--~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------  376 (486)
                       .+..+........|+|+  .++..+ ..+  .|+++|+.+++......  .+..  ...++++|++++.....      
T Consensus       271 -~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~--~g~~--~~~~SPDG~~Ia~~~~~~~~~~~  345 (419)
T PRK04043        271 -QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF--HGKN--NSSVSTYKNYIVYSSRETNNEFG  345 (419)
T ss_pred             -EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc--CCCc--CceECCCCCEEEEEEcCCCcccC
Confidence             34333332334567754  444443 333  67888887765432211  1221  23556689988776643      


Q ss_pred             ---CcEEEEECCCceEEEEEcCC-cccEEEEEeCCCEEEEEeCC-C--cEEEEECC
Q psy9182         377 ---RTIKVWNTSSCEFVRTLNGH-KRGIACLQYRDRLVVSGSSD-N--TIRLWDIE  425 (486)
Q Consensus       377 ---~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d-g--~v~iwd~~  425 (486)
                         ..|.+.|+.+++.. .+... ...-..++++|+.++..+.+ +  .+.+.++.
T Consensus       346 ~~~~~I~v~d~~~g~~~-~LT~~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~  400 (419)
T PRK04043        346 KNTFNLYLISTNSDYIR-RLTANGVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN  400 (419)
T ss_pred             CCCcEEEEEECCCCCeE-ECCCCCCcCCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence               36888898887643 33322 22224455577776655532 2  35566665

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.95  E-value=0.0034  Score=55.78  Aligned_cols=177  Identities=13%  Similarity=0.186  Sum_probs=107.2

Q ss_pred             EEEEeCCCEEEEEe-----cCCeEEEEECC-CceeeEEEcCCcccEEEEEe--cCCEEEEEe------------------
Q psy9182         238 YCLQYDDHKIVSGL-----RDNTIKVWDRV-SLQCIKVLTGHTGSVLCLQY--DERVIISGS------------------  291 (486)
Q Consensus       238 ~~~~~~~~~l~~~~-----~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~------------------  291 (486)
                      -++++||++|++.-     ..|.|-|||.. +.+.+.++..|.-.-..+.+  |++.|+++.                  
T Consensus        56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~t  135 (305)
T PF07433_consen   56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDT  135 (305)
T ss_pred             EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhh
Confidence            46789999998864     35789999998 77788888876554444544  776666652                  


Q ss_pred             CCCcEEEEECCCCcEEEEe----cccCccEEEEEEcCC-eEEEEeC-CC-------cEEEEECCCCCceeeEEe----ee
Q psy9182         292 SDSTVRVWDVNTGEMVNTL----IHHCEAVLHLRFSNG-MMVTCSK-DR-------SIAVWDMVSPNEITLRRV----LV  354 (486)
Q Consensus       292 ~dg~i~vwd~~~~~~~~~~----~~~~~~i~~~~~~~~-~l~~~~~-dg-------~i~i~d~~~~~~~~~~~~----~~  354 (486)
                      .+-.+...|..+|+.+.+.    ..|...+..+++.++ .++.+.. .|       -|.+++.  ++.+.....    ..
T Consensus       136 M~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~  213 (305)
T PF07433_consen  136 MQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWR  213 (305)
T ss_pred             cCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHH
Confidence            2234666778888887764    336678888888754 4444432 11       1222222  221111111    12


Q ss_pred             cCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcE
Q psy9182         355 GHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTI  419 (486)
Q Consensus       355 ~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v  419 (486)
                      .....+-++++  ++.++++++ .-+.+.+||..+++.+....-.  .+..++.. +.++++. ..|.+
T Consensus       214 ~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~--D~cGva~~~~~f~~ss-G~G~~  279 (305)
T PF07433_consen  214 RLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP--DACGVAPTDDGFLVSS-GQGQL  279 (305)
T ss_pred             hhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC--ceeeeeecCCceEEeC-CCccE
Confidence            23466778888  556665554 5678999999999887765432  34555553 3344443 34443

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=97.92  E-value=0.014  Score=52.04  Aligned_cols=233  Identities=12%  Similarity=0.158  Sum_probs=133.6

Q ss_pred             cceEEEEeCCCEEEEEecC---CeEEEEECCC--ceee--EEEcCCcccEEEEEe--cCCEEEEEeC-CCcEEEEECCC-
Q psy9182         235 KGVYCLQYDDHKIVSGLRD---NTIKVWDRVS--LQCI--KVLTGHTGSVLCLQY--DERVIISGSS-DSTVRVWDVNT-  303 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~d---g~i~i~d~~~--~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~-  303 (486)
                      ..-+.+.++++.|.++..+   |.|..|.++.  |+..  ........+-+-++.  ++++++++.. .|.|.++-++. 
T Consensus        42 ptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~d  121 (346)
T COG2706          42 PTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQAD  121 (346)
T ss_pred             CceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccC
Confidence            3445677788888877654   6677776654  4432  221112222244444  7888888865 58899999865 


Q ss_pred             CcEEEE--ecccCcc----------EEEEEEcCC--eEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C
Q psy9182         304 GEMVNT--LIHHCEA----------VLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D  366 (486)
Q Consensus       304 ~~~~~~--~~~~~~~----------i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~  366 (486)
                      |.+...  ...|.+.          +....+.|+  ++++.. ....|.+|++..+...............-.-+.|  +
T Consensus       122 G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn  201 (346)
T COG2706         122 GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPN  201 (346)
T ss_pred             CccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCC
Confidence            433221  1122222          555556654  455443 3457999999876543222222223333445555  8


Q ss_pred             CCEEEEEe-CCCcEEEEECCCc-eEEEEEcCC---------cccEEE--EEeCCCEEEEEeC-CCcEEEEECCC--Ceee
Q psy9182         367 EKYIVSAS-GDRTIKVWNTSSC-EFVRTLNGH---------KRGIAC--LQYRDRLVVSGSS-DNTIRLWDIEC--GACL  430 (486)
Q Consensus       367 ~~~l~~~~-~d~~i~iwd~~~~-~~~~~~~~~---------~~~v~~--~~~~~~~l~~~~~-dg~v~iwd~~~--~~~~  430 (486)
                      +++....+ -+++|.+|..... ..+..++.+         .....+  ++.+|++|.++.. ...|.+|.+..  +++.
T Consensus       202 ~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~  281 (346)
T COG2706         202 GKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLE  281 (346)
T ss_pred             CcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEE
Confidence            88777665 4889999998763 222222211         122333  3446888887653 34788887753  3321


Q ss_pred             --EEecCcccCeEEEEe--cCCEEEEEeCC-CcEEEEeCCCC
Q psy9182         431 --RVLEGHEELVRCIRF--DAKRIVSGAYD-GKIKVWNLVAA  467 (486)
Q Consensus       431 --~~~~~h~~~v~~~~~--~~~~l~s~~~d-g~v~iwdl~~~  467 (486)
                        .....+...-..+.+  ++++|++++.| ..|.+|.++..
T Consensus       282 ~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         282 LVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             EEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence              222233333566666  88888888865 46999988764

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.90  E-value=0.015  Score=51.65  Aligned_cols=163  Identities=15%  Similarity=0.134  Sum_probs=100.9

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC-----CcccEEEEEe--cCCEEEEEeCC--------CcEEEEECCC
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-----HTGSVLCLQY--DERVIISGSSD--------STVRVWDVNT  303 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~v~~~~~--~~~~l~~~~~d--------g~i~vwd~~~  303 (486)
                      ++...+..++++...+ +.++|..+++.......     .....+.+.+  +|++.++....        |.|..++.. 
T Consensus        46 ~~~~~~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-  123 (246)
T PF08450_consen   46 AFDRPDGRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-  123 (246)
T ss_dssp             EEECTTSEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-
T ss_pred             EEEccCCEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-
Confidence            3442345666666554 55669888865544432     2344566777  67766655433        557777876 


Q ss_pred             CcEEEEecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCc-eeeEEee---ecCcccEEEEEe--CCCEEEEEe
Q psy9182         304 GEMVNTLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNE-ITLRRVL---VGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       304 ~~~~~~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~-~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      ++... +...-.....++|+++  .| ++-+..+.|..|++..... +.....+   .......-.+++  +|++.++..
T Consensus       124 ~~~~~-~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~  202 (246)
T PF08450_consen  124 GKVTV-VADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW  202 (246)
T ss_dssp             SEEEE-EEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE
T ss_pred             CeEEE-EecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc
Confidence            54333 3333455678888864  44 4667788899999875433 2222222   222223555666  678777777


Q ss_pred             CCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         375 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      ..+.|.++|.+ |+.+..+......+++++|
T Consensus       203 ~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~f  232 (246)
T PF08450_consen  203 GGGRIVVFDPD-GKLLREIELPVPRPTNCAF  232 (246)
T ss_dssp             TTTEEEEEETT-SCEEEEEE-SSSSEEEEEE
T ss_pred             CCCEEEEECCC-ccEEEEEcCCCCCEEEEEE
Confidence            88999999987 8888888876668888888

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.90  E-value=0.008  Score=56.72  Aligned_cols=155  Identities=16%  Similarity=0.179  Sum_probs=88.8

Q ss_pred             cCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeee-----cCcccEEEEEe-------CC---CEEEEEeCC
Q psy9182         313 HCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLV-----GHRAAVNVVDF-------DE---KYIVSASGD  376 (486)
Q Consensus       313 ~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~~~v~~~~~-------~~---~~l~~~~~d  376 (486)
                      ..++|++++.++ +++++|+.+|.+.+.|++.+..+.......     .....++++.|       |+   -.+++|+..
T Consensus        85 ~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~  164 (395)
T PF08596_consen   85 KQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNS  164 (395)
T ss_dssp             -S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETT
T ss_pred             cCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCC
Confidence            457888888875 699999999999999998876554322111     13446777777       33   378899999


Q ss_pred             CcEEEEECC--C-ceE----EEEEcCCcccEEEEEe-C---C-------------------CEEEEEeCCCcEEEEECCC
Q psy9182         377 RTIKVWNTS--S-CEF----VRTLNGHKRGIACLQY-R---D-------------------RLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       377 ~~i~iwd~~--~-~~~----~~~~~~~~~~v~~~~~-~---~-------------------~~l~~~~~dg~v~iwd~~~  426 (486)
                      |.+.+|.+-  . +..    ......+.+.+..+.. +   |                   +-++....+..++++...+
T Consensus       165 G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~  244 (395)
T PF08596_consen  165 GNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPK  244 (395)
T ss_dssp             SEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT-
T ss_pred             CCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCC
Confidence            999999764  1 221    1122234454443332 1   0                   1244555578899999988


Q ss_pred             CeeeEEecCcccCeEEEEe-------cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         427 GACLRVLEGHEELVRCIRF-------DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~-------~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+..+...........+.+       .+..|++-..+|.|+++.+..-
T Consensus       245 ~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L  292 (395)
T PF08596_consen  245 SKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL  292 (395)
T ss_dssp             --EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT-
T ss_pred             CcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc
Confidence            8776665533222223333       3556888899999999999764

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG1897|consensus

Probab=97.89  E-value=0.038  Score=56.00  Aligned_cols=169  Identities=16%  Similarity=0.233  Sum_probs=111.8

Q ss_pred             cEEEEECCCCcEEEEeccc-Cc---cEEEEEEcCC---eEEEEeC----------CCcEEEEECCCCCceeeEEeeecCc
Q psy9182         295 TVRVWDVNTGEMVNTLIHH-CE---AVLHLRFSNG---MMVTCSK----------DRSIAVWDMVSPNEITLRRVLVGHR  357 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~-~~---~i~~~~~~~~---~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~  357 (486)
                      .++++|-++.+.+...+.. ..   .+.+..|.++   ++++|+.          .|.|.+|.+...+.+....... -.
T Consensus       751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~-v~  829 (1096)
T KOG1897|consen  751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETV-VK  829 (1096)
T ss_pred             EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeee-ec
Confidence            3677777776655543321 12   2334446433   6666652          5788888887744443333222 23


Q ss_pred             ccEEEEE-eCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe--eeEE
Q psy9182         358 AAVNVVD-FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA--CLRV  432 (486)
Q Consensus       358 ~~v~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~--~~~~  432 (486)
                      +.+.++. |+|+++|.-+  ..|++|+..+.+.++.-..+..++..+..  .++.+++|..-+++.+...+..+  ....
T Consensus       830 Gav~aL~~fngkllA~In--~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~ev  907 (1096)
T KOG1897|consen  830 GAVYALVEFNGKLLAGIN--QSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEV  907 (1096)
T ss_pred             cceeehhhhCCeEEEecC--cEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEe
Confidence            4455544 4888887654  58999999988777777778888777665  59999999998888776654333  3332


Q ss_pred             e-cCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCC
Q psy9182         433 L-EGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       433 ~-~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      - .-+..+.+++.+ ++...+.+..+|.+.+-..++
T Consensus       908 ArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d~  943 (1096)
T KOG1897|consen  908 ARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKDS  943 (1096)
T ss_pred             ehhhCccceeeEEEecCceEEeecccccEEEEEecC
Confidence            2 346778899998 888888888889888877664

>KOG3621|consensus

Probab=97.89  E-value=0.00098  Score=64.31  Aligned_cols=154  Identities=11%  Similarity=0.195  Sum_probs=100.2

Q ss_pred             CCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccE---EEEEecCCEEEEEeCCCcEEEEECCCCcEEE
Q psy9182         232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV---LCLQYDERVIISGSSDSTVRVWDVNTGEMVN  308 (486)
Q Consensus       232 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v---~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~  308 (486)
                      .......|++..+++++.|+..|.+++|+-..++....-.+-...+   .+++.+..++|+|+..|.|.++-+..+.+-.
T Consensus        33 ~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~  112 (726)
T KOG3621|consen   33 PARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD  112 (726)
T ss_pred             cceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc
Confidence            3445567888899999999999999999987766554333212222   3334477888999999999999887643211


Q ss_pred             -----Ee-cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCC-CceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182         309 -----TL-IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSP-NEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI  379 (486)
Q Consensus       309 -----~~-~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i  379 (486)
                           .. ..|...|++++|+.+  .+++|...|.|..-.+... .-....+.+......|..++.-..+|++++.- .-
T Consensus       113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl~-r~  191 (726)
T KOG3621|consen  113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTLT-RC  191 (726)
T ss_pred             ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhhh-hh
Confidence                 11 236788999999976  8999999999998887762 11111223334456677777744444333332 23


Q ss_pred             EEEECCC
Q psy9182         380 KVWNTSS  386 (486)
Q Consensus       380 ~iwd~~~  386 (486)
                      .+++++.
T Consensus       192 ~Lc~tE~  198 (726)
T KOG3621|consen  192 ILCQTEA  198 (726)
T ss_pred             heeecch
Confidence            3445443

>KOG1832|consensus

Probab=97.88  E-value=9e-06  Score=79.59  Aligned_cols=188  Identities=16%  Similarity=0.251  Sum_probs=121.8

Q ss_pred             CCCccceEEEE--eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC--cEEEEECCC-
Q psy9182         231 SENSKGVYCLQ--YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS--TVRVWDVNT-  303 (486)
Q Consensus       231 ~~~~~~v~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg--~i~vwd~~~-  303 (486)
                      ..+.....|+.  -+.+.|++|+..|.|++|++.+|.......+|..+|+-+.+  +|..+++.+.-.  ...+|++.. 
T Consensus      1098 rd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~ 1177 (1516)
T KOG1832|consen 1098 RDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST 1177 (1516)
T ss_pred             hccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc
Confidence            34444444544  46789999999999999999999999999999999999988  777666654432  477899854 


Q ss_pred             CcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeE-EeeecCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182         304 GEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLR-RVLVGHRAAVNVVDF--DEKYIVSASGDRT  378 (486)
Q Consensus       304 ~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~d~~  378 (486)
                      +.+.+++..    -.++.|++.  .-+.|+......+||+.++...... ....+....-++..|  +..+++   .|| 
T Consensus      1178 ~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndG- 1249 (1516)
T KOG1832|consen 1178 GGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDG- 1249 (1516)
T ss_pred             cCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eCc-
Confidence            455555543    346777764  4456666678999999998755321 111111122233444  344444   344 


Q ss_pred             EEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEE
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRV  432 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~  432 (486)
                       .+||++..+.++.|......+ -.+.++|.-++.-+     .|||+++-+.++.
T Consensus      1250 -vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~ 1298 (1516)
T KOG1832|consen 1250 -VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHS 1298 (1516)
T ss_pred             -eeeeeccHHHHhhhhhheecccccccCCCceEEeec-----hhhhhHHHHHHhc
Confidence             479999887777766443222 23444566666655     4899887665543

>KOG4441|consensus

Probab=97.88  E-value=0.0017  Score=64.62  Aligned_cols=224  Identities=13%  Similarity=0.243  Sum_probs=136.5

Q ss_pred             CCCEEEEEecCC------eEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC------CcEEEEECCCCcEEE
Q psy9182         243 DDHKIVSGLRDN------TIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD------STVRVWDVNTGEMVN  308 (486)
Q Consensus       243 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~  308 (486)
                      .+..++.|+.++      .+..||..+++-...  +............++...++|+.|      ..+..||..+++...
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~  363 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP  363 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceec
Confidence            455677777763      678888877643322  222222223333478888889888      357788988777433


Q ss_pred             E--ecccCccEEEEEEcCCeEEEEeCCCc-----EEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC----
Q psy9182         309 T--LIHHCEAVLHLRFSNGMMVTCSKDRS-----IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR----  377 (486)
Q Consensus       309 ~--~~~~~~~i~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~----  377 (486)
                      .  +.............+...++|+.||.     +..||..+.+-. ................++|...++|+.++    
T Consensus       364 ~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~-~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~  442 (571)
T KOG4441|consen  364 VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWT-PVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNC  442 (571)
T ss_pred             cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCccc-ccCCCCcceeeeEEEEECCEEEEEcCcCCCccc
Confidence            1  12222223333444567888888864     777887765422 11212223444555666899888888554    


Q ss_pred             --cEEEEECCCceE--EEEEcCCcccEEEEEeCCCEEEEEeCCCc-----EEEEECCCCe--eeEEecCcccCeEEEEec
Q psy9182         378 --TIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNT-----IRLWDIECGA--CLRVLEGHEELVRCIRFD  446 (486)
Q Consensus       378 --~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~dg~-----v~iwd~~~~~--~~~~~~~h~~~v~~~~~~  446 (486)
                        .+..||..+.+-  +..+............++.+.+.|+.|+.     |..||..+.+  .+..+......+.....+
T Consensus       443 l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~  522 (571)
T KOG4441|consen  443 LNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLG  522 (571)
T ss_pred             cceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEEC
Confidence              477888877543  23333333334456668889999998763     7888887643  343344455555566668


Q ss_pred             CCEEEEEeCCC-----cEEEEeCCCC
Q psy9182         447 AKRIVSGAYDG-----KIKVWNLVAA  467 (486)
Q Consensus       447 ~~~l~s~~~dg-----~v~iwdl~~~  467 (486)
                      +...++|+.||     +|..||-.+.
T Consensus       523 ~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  523 GKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             CEEEEEecccCccccceeEEcCCCCC
Confidence            88899999887     4677776554

>PHA02713 hypothetical protein; Provisional

Probab=97.87  E-value=0.0013  Score=65.65  Aligned_cols=188  Identities=9%  Similarity=0.075  Sum_probs=109.0

Q ss_pred             EeCCCEEEEEecC------CeEEEEECCCceeeE--EEcCCcccEEEEEecCCEEEEEeCCC-----cEEEEECCCCcEE
Q psy9182         241 QYDDHKIVSGLRD------NTIKVWDRVSLQCIK--VLTGHTGSVLCLQYDERVIISGSSDS-----TVRVWDVNTGEMV  307 (486)
Q Consensus       241 ~~~~~~l~~~~~d------g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~  307 (486)
                      ..++..+++|+.+      ..+..||..+.+-..  .+............+++..+.|+.++     .+..||..+.+..
T Consensus       301 ~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~  380 (557)
T PHA02713        301 IVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWK  380 (557)
T ss_pred             EECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence            3577778888754      347788877654221  11111122233445888888888764     4888998876543


Q ss_pred             E--EecccCccEEEEEEcCCeEEEEeCC-----------------------CcEEEEECCCCCceeeEEeeecCcccEEE
Q psy9182         308 N--TLIHHCEAVLHLRFSNGMMVTCSKD-----------------------RSIAVWDMVSPNEITLRRVLVGHRAAVNV  362 (486)
Q Consensus       308 ~--~~~~~~~~i~~~~~~~~~l~~~~~d-----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~  362 (486)
                      .  .+.........+...+...+.|+.+                       ..+..||..+.+-. ....+.........
T Consensus       381 ~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~-~v~~m~~~r~~~~~  459 (557)
T PHA02713        381 MLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWE-TLPNFWTGTIRPGV  459 (557)
T ss_pred             ECCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEe-ecCCCCcccccCcE
Confidence            2  1221122222334445566666654                       24777887765321 11111111222233


Q ss_pred             EEeCCCEEEEEeCC------CcEEEEECCC---ceEEEEEcCCcccEEEEEeCCCEEEEEeCCC--cEEEEECCCCee
Q psy9182         363 VDFDEKYIVSASGD------RTIKVWNTSS---CEFVRTLNGHKRGIACLQYRDRLVVSGSSDN--TIRLWDIECGAC  429 (486)
Q Consensus       363 ~~~~~~~l~~~~~d------~~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg--~v~iwd~~~~~~  429 (486)
                      +..+++..+.|+.+      ..+..||..+   ...+..+............++.+.++|+.||  .+..||..+.+=
T Consensus       460 ~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~W  537 (557)
T PHA02713        460 VSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYTYEW  537 (557)
T ss_pred             EEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcCcccccc
Confidence            45578877777654      2467899886   3444555555555666777899999999888  788888876543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=97.86  E-value=0.03  Score=53.78  Aligned_cols=204  Identities=16%  Similarity=0.100  Sum_probs=111.9

Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCE-EEEEeC---CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV-IISGSS---DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      .|.+-|..... .+.+.... ....-.|  ||+. ++..+.   +..|+++|+.+++...... ..+......|+|+  .
T Consensus       170 ~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~  246 (419)
T PRK04043        170 NIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSK  246 (419)
T ss_pred             eEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCE
Confidence            45554544333 22222222 4445555  7764 554333   3569999998887654433 3444556678765  4


Q ss_pred             EE-EEeC--CCcEEEEECCCCCceeeEEeeecCcc--cEEEEEeCCCEEEEEeC-CC--cEEEEECCCceEEEEEcCCcc
Q psy9182         327 MV-TCSK--DRSIAVWDMVSPNEITLRRVLVGHRA--AVNVVDFDEKYIVSASG-DR--TIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       327 l~-~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      ++ +.+.  +..|.++|+.+++...    +..+..  .-...++||+.++..+. .+  .|++.|+.+++..+...... 
T Consensus       247 la~~~~~~g~~~Iy~~dl~~g~~~~----LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~-  321 (419)
T PRK04043        247 LLLTMAPKGQPDIYLYDTNTKTLTQ----ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGK-  321 (419)
T ss_pred             EEEEEccCCCcEEEEEECCCCcEEE----cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCC-
Confidence            43 3333  3568888887765322    111221  11234448887766653 23  68888998877643332111 


Q ss_pred             cEEEEEeCCCEEEEEeCC---------CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC-C--cEEEEeC
Q psy9182         399 GIACLQYRDRLVVSGSSD---------NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD-G--KIKVWNL  464 (486)
Q Consensus       399 ~v~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d-g--~v~iwdl  464 (486)
                      ....++++|+.++..+..         ..|.+.|+.+++. ..+.... ......|  ||+.|+..+.+ +  .+.+.++
T Consensus       322 ~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l  399 (419)
T PRK04043        322 NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRL  399 (419)
T ss_pred             cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEec
Confidence            123566678887766643         3688889887764 3343321 2223555  88887655543 2  3666676


Q ss_pred             CCCC
Q psy9182         465 VAAL  468 (486)
Q Consensus       465 ~~~~  468 (486)
                      +...
T Consensus       400 ~g~~  403 (419)
T PRK04043        400 NYNK  403 (419)
T ss_pred             CCCe
Confidence            6543

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.78  E-value=0.032  Score=51.73  Aligned_cols=206  Identities=13%  Similarity=0.235  Sum_probs=125.0

Q ss_pred             CeEEEEECCCceeeEEEcCC-cccEEEEEe---c------CCEEEEEeC----------CCcEEEEECCCC----cEEEE
Q psy9182         254 NTIKVWDRVSLQCIKVLTGH-TGSVLCLQY---D------ERVIISGSS----------DSTVRVWDVNTG----EMVNT  309 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~-~~~v~~~~~---~------~~~l~~~~~----------dg~i~vwd~~~~----~~~~~  309 (486)
                      ..|++.|..+.+.+..+.-. ...+.++..   .      ..++++|+.          .|.|.++++...    ..+..
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            36888888888777655432 234454433   2      357777643          288999999884    12222


Q ss_pred             e--cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-
Q psy9182         310 L--IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS-  386 (486)
Q Consensus       310 ~--~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-  386 (486)
                      +  ....++|.++..-++.++++. ++.|.+|++...+.+.... .......+.++...+++++.|.....+.++..+. 
T Consensus        82 i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l~~~~-~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~  159 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTLLKKA-FYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEE  159 (321)
T ss_dssp             EEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSEEEEE-EE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETT
T ss_pred             EEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccchhhh-eecceEEEEEEeccccEEEEEEcccCEEEEEEEcc
Confidence            1  234678999988888755554 5899999998887232222 2233447888888888999999888888774432 


Q ss_pred             ceEEEEEc--CCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-------C--eeeEEecC-cccCeEEE---EecC--
Q psy9182         387 CEFVRTLN--GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-------G--ACLRVLEG-HEELVRCI---RFDA--  447 (486)
Q Consensus       387 ~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~-------~--~~~~~~~~-h~~~v~~~---~~~~--  447 (486)
                      ...+..+.  .....++++.+  +++.++.+..+|.+.++....       +  +......- ....|+++   +...  
T Consensus       160 ~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~  239 (321)
T PF03178_consen  160 NNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRS  239 (321)
T ss_dssp             TE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--S
T ss_pred             CCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecC
Confidence            23233332  23344666655  567999999999999998762       2  22222222 24567777   3211  


Q ss_pred             --------CEEEEEeCCCcEEE
Q psy9182         448 --------KRIVSGAYDGKIKV  461 (486)
Q Consensus       448 --------~~l~s~~~dg~v~i  461 (486)
                              ..++-++.+|.|..
T Consensus       240 ~~~~~~~~~~i~~~T~~G~Ig~  261 (321)
T PF03178_consen  240 GSSESPNRPQILYGTVDGSIGV  261 (321)
T ss_dssp             SSS-TTEEEEEEEEETTS-EEE
T ss_pred             CCCcccccceEEEEecCCEEEE
Confidence                    13788888998873

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG1920|consensus

Probab=97.70  E-value=0.0061  Score=62.77  Aligned_cols=224  Identities=13%  Similarity=0.173  Sum_probs=123.6

Q ss_pred             cceEEEEe--CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         235 KGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       235 ~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                      ..+.++.+  ++..++.+...|.|.+-|..+.... ....-...|.+++|  |+..++..+..+++.+-+ .+..++...
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E~  146 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAEK  146 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhcc
Confidence            35555555  7788889999999999987765432 22224567888888  788888888877766543 333333221


Q ss_pred             cc-----cCccEEEEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-----CCC
Q psy9182         311 IH-----HCEAVLHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-----GDR  377 (486)
Q Consensus       311 ~~-----~~~~i~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-----~d~  377 (486)
                      .-     ..+....+-|-.. .-+-|+ .|.....+....+...  .. ......-+.++|  ||+++++..     ...
T Consensus       147 ~L~~d~~~~sk~v~VGwGrkeTqfrgs-~gr~~~~~~~~~ek~~--~~-~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  147 PLDADDERKSKFVNVGWGRKETQFRGS-EGRQAARQKIEKEKAL--EQ-IEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             ccccccccccccceecccccceeeecc-hhhhcccccccccccc--cc-hhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence            11     1122223333221 111111 1222222211111100  00 011222345777  888988843     337


Q ss_pred             cEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEe---CCCcEEEEECCCCeeeEE----ecCcccCeEEEEe--c
Q psy9182         378 TIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGS---SDNTIRLWDIECGACLRV----LEGHEELVRCIRF--D  446 (486)
Q Consensus       378 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~dg~v~iwd~~~~~~~~~----~~~h~~~v~~~~~--~  446 (486)
                      .|++||.+ |.+-..-....+.-.+++|  .|..+++-.   +|+.|.+|.-+ |..-..    +......|..++|  +
T Consensus       223 kirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~de~~ve~L~Wns~  300 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLDEKEVEELAWNSN  300 (1265)
T ss_pred             eEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcccccchheeeecCC
Confidence            89999977 5433332222333345566  577777654   46789999854 433332    2333445899999  6


Q ss_pred             CCEEEE---EeCCCcEEEEeCCC
Q psy9182         447 AKRIVS---GAYDGKIKVWNLVA  466 (486)
Q Consensus       447 ~~~l~s---~~~dg~v~iwdl~~  466 (486)
                      +..|++   ......|++|-+.+
T Consensus       301 sdiLAv~~~~~e~~~v~lwt~~N  323 (1265)
T KOG1920|consen  301 SDILAVVTSNLENSLVQLWTTGN  323 (1265)
T ss_pred             CCceeeeecccccceEEEEEecC
Confidence            777776   44455599998765

>KOG1920|consensus

Probab=97.70  E-value=0.005  Score=63.37  Aligned_cols=236  Identities=11%  Similarity=0.172  Sum_probs=117.1

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      ..|+++.|--++.-++.+..+|.|.+-|.++.... ....-..+|.+++|+               +|+..++..+.+++
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS---------------~Dee~l~liT~~~t  132 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWS---------------PDEELLALITGRQT  132 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeec---------------CCCcEEEEEeCCcE
Confidence            46788888888888999999999999988876532 122234589999997               45555666665565


Q ss_pred             ceeeec--ccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         185 ILIWDF--LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       185 i~vWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                      +.+-.-  .--.+.+.    ..........+...|....                         -..-+..|.....+..
T Consensus       133 ll~mT~~f~~i~E~~L----~~d~~~~sk~v~VGwGrke-------------------------Tqfrgs~gr~~~~~~~  183 (1265)
T KOG1920|consen  133 LLFMTKDFEPIAEKPL----DADDERKSKFVNVGWGRKE-------------------------TQFRGSEGRQAARQKI  183 (1265)
T ss_pred             EEEEeccccchhcccc----ccccccccccceecccccc-------------------------eeeecchhhhcccccc
Confidence            544321  00000000    0000000000000010000                         0000111111111100


Q ss_pred             Cc-eeeEEEcCCcccEEEEEe--cCCEEEEE-----eCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEE--
Q psy9182         263 SL-QCIKVLTGHTGSVLCLQY--DERVIISG-----SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC--  330 (486)
Q Consensus       263 ~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~--  330 (486)
                      .. +......-+ +.=+.++|  ||.++++.     .....|++||.+ |..-..-......-.+++|-|  ..+++.  
T Consensus       184 ~~ek~~~~~~~~-~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~  261 (1265)
T KOG1920|consen  184 EKEKALEQIEQD-DHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQC  261 (1265)
T ss_pred             cccccccchhhc-cCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeee
Confidence            00 000000111 11245677  88888873     333789999976 544333222233345666755  344443  


Q ss_pred             -eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEE---EeCCCcEEEEECCCc
Q psy9182         331 -SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVS---ASGDRTIKVWNTSSC  387 (486)
Q Consensus       331 -~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~---~~~d~~i~iwd~~~~  387 (486)
                       +.|+.|.+|.-+.-+..............+..+.|  ++..|++   ......|++|-+.+.
T Consensus       262 ~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  262 KTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             cCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence             34667888875432211111112223344888999  5667776   444455999998774

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.67  E-value=0.043  Score=52.53  Aligned_cols=187  Identities=12%  Similarity=0.198  Sum_probs=97.9

Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe-------cccCccEEEEEEcCCe
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL-------IHHCEAVLHLRFSNGM  326 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~~~~~i~~~~~~~~~  326 (486)
                      .|.||+.. |+.+..+.-..+.+.++.| +...|++...||.++++|+. |+....+       ......+....+.++-
T Consensus        62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G  139 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRIFAIWFYKNG  139 (410)
T ss_pred             EEEEECCC-CCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCC-CceeechhhhccccCcccccccccccCCCC
Confidence            59999854 5556555444488999999 56678888899999999986 4431111       1111222223333232


Q ss_pred             EEEEeCCCcEEEEECCCCC-ceeeEEeeec-------Ccc--cEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         327 MVTCSKDRSIAVWDMVSPN-EITLRRVLVG-------HRA--AVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-------~~~--~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      +++-..++.+.+.+-.... ..........       ...  .+..+..+....+....++.+.+.+....+.   +. .
T Consensus       140 ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~-~  215 (410)
T PF04841_consen  140 IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---ID-S  215 (410)
T ss_pred             EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---cc-C
Confidence            3334455555554332211 1000000000       000  0111112334444444445555444322211   22 2


Q ss_pred             cccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCc-ccCeEEEEecC
Q psy9182         397 KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRFDA  447 (486)
Q Consensus       397 ~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~  447 (486)
                      .+++..++.  +++++|.-..+|.+.+.+..-.+.+..+... ......|.|-|
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG  269 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCG  269 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEEC
Confidence            245665554  6899999999999999887666666665544 34566777733

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.64  E-value=0.0077  Score=44.51  Aligned_cols=89  Identities=18%  Similarity=0.308  Sum_probs=64.2

Q ss_pred             CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-c
Q psy9182         368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-D  446 (486)
Q Consensus       368 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~  446 (486)
                      +.|++|+.|..|++|+-.  +.+..+......+.-....+..++.+..+|+|.+|+-  ...+...+... .+.++.+ |
T Consensus        16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~-~~~~~~~~D   90 (111)
T PF14783_consen   16 NELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGGGRFAYALANGTVGVYDR--SQRLWRIKSKN-QVTSMAFYD   90 (111)
T ss_pred             ceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCCCEEEEEecCCEEEEEeC--cceeeeeccCC-CeEEEEEEc
Confidence            689999999999999844  6667776554444444446788999999999999986  34555555433 3667666 3


Q ss_pred             CC-----EEEEEeCCCcEEE
Q psy9182         447 AK-----RIVSGAYDGKIKV  461 (486)
Q Consensus       447 ~~-----~l~s~~~dg~v~i  461 (486)
                      -+     -|++|-.+|.|-+
T Consensus        91 ~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   91 INGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             CCCCCceEEEEEecCCeEEe
Confidence            22     4999999998753

>KOG1832|consensus

Probab=97.61  E-value=3.2e-05  Score=75.90  Aligned_cols=188  Identities=15%  Similarity=0.325  Sum_probs=121.3

Q ss_pred             eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEE-eCCC-cEEE
Q psy9182         265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC-SKDR-SIAV  338 (486)
Q Consensus       265 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~-~~dg-~i~i  338 (486)
                      +..+.+..|....+|++|  +.++|+.|+..|.|+++++.+|........|..+++.+..+.  ..+++. +... -..+
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaL 1171 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSAL 1171 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHH
Confidence            345567778888899999  668999999999999999999999999999999999998873  344433 3333 5678


Q ss_pred             EECCCCCceeeEEeeecCcccEEEEEeCC--CEEEEEeCCCcEEEEECCCceEEEEE-cC---CcccEEEEEe--CCCEE
Q psy9182         339 WDMVSPNEITLRRVLVGHRAAVNVVDFDE--KYIVSASGDRTIKVWNTSSCEFVRTL-NG---HKRGIACLQY--RDRLV  410 (486)
Q Consensus       339 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~-~~---~~~~v~~~~~--~~~~l  410 (486)
                      |++...-.  ....+    ..-.++.|.+  ..-+.|+......+||+.++.++.++ .+   ....-++..|  ...++
T Consensus      1172 W~~~s~~~--~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LI 1245 (1516)
T KOG1832|consen 1172 WDASSTGG--PRHSF----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLI 1245 (1516)
T ss_pred             hccccccC--ccccc----cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceE
Confidence            98865221  11221    2233556622  23344555567899999998877663 21   1111233333  34554


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEecCcccCeEEE-EecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~-~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +   +||  .+||++..+.++.|......+... ..+|+.++.-++     |||+++-.
T Consensus      1246 l---ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINSE-----IwD~RTF~ 1294 (1516)
T KOG1832|consen 1246 L---NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINSE-----IWDMRTFK 1294 (1516)
T ss_pred             e---eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeech-----hhhhHHHH
Confidence            4   355  479999887777776544322222 226666776553     78887654

>KOG2444|consensus

Probab=97.59  E-value=0.0001  Score=61.12  Aligned_cols=140  Identities=16%  Similarity=0.115  Sum_probs=90.3

Q ss_pred             eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEE
Q psy9182         326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQ  404 (486)
Q Consensus       326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~  404 (486)
                      .+...+.+|.|+-++++..+...  +...-+... ..+.--+..+++|+.+|.|.+|+... +............+.++-
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~--rse~~~~e~-~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~I  108 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESC--RSERFIDEG-QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGI  108 (238)
T ss_pred             hhccccCCcccccchhhhhhhhh--hhhhhhhcc-eeecccCceEEeecccceEEEecCCccchHHHhhhcccccceecc
Confidence            45566778888888876543221  111111111 22222567889999999999998762 122222222333444444


Q ss_pred             eC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc-cCeEEEEe--cCCEEEEE--eCCCcEEEEeCCCCC
Q psy9182         405 YR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DAKRIVSG--AYDGKIKVWNLVAAL  468 (486)
Q Consensus       405 ~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~l~s~--~~dg~v~iwdl~~~~  468 (486)
                      +.   +.+..+++.||.|+.|++.-++.+.....|. .++..+..  .+..++.+  |.|..++.|++..-.
T Consensus       109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~  180 (238)
T KOG2444|consen  109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK  180 (238)
T ss_pred             ccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence            43   5588999999999999999888888888787 45554444  66777777  888888888887643

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.58  E-value=0.055  Score=48.98  Aligned_cols=230  Identities=12%  Similarity=0.093  Sum_probs=132.2

Q ss_pred             EEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCCcc---------cEEEEEecCCEEEEEe--CCCcE
Q psy9182         238 YCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGHTG---------SVLCLQYDERVIISGS--SDSTV  296 (486)
Q Consensus       238 ~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~~~l~~~~--~dg~i  296 (486)
                      ..++++++.++++.          ..-.|.+||..+......+.-...         ....++-|+++++...  ---.|
T Consensus        41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SV  120 (342)
T PF06433_consen   41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSV  120 (342)
T ss_dssp             EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEE
T ss_pred             eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeE
Confidence            44678888777643          345799999999888775542221         1234455777766643  34568


Q ss_pred             EEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEE--eeecCcccEE-EEE--eCCCEEE
Q psy9182         297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR--VLVGHRAAVN-VVD--FDEKYIV  371 (486)
Q Consensus       297 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~v~-~~~--~~~~~l~  371 (486)
                      .|.|+..++.+.++.. .+...-.-..++.+.+-+.||.+.-..+..........  .+.....++. .-.  -.+..++
T Consensus       121 tVVDl~~~kvv~ei~~-PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~  199 (342)
T PF06433_consen  121 TVVDLAAKKVVGEIDT-PGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLY  199 (342)
T ss_dssp             EEEETTTTEEEEEEEG-TSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEE
T ss_pred             EEEECCCCceeeeecC-CCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEE
Confidence            8888888888777654 22222223345688899999999999988433322221  1212222221 111  1344555


Q ss_pred             EEeCCCcEEEEECCCceE--EEEEcCC------------cccEEEEEeCCCEEEEEe---CCC-------cEEEEECCCC
Q psy9182         372 SASGDRTIKVWNTSSCEF--VRTLNGH------------KRGIACLQYRDRLVVSGS---SDN-------TIRLWDIECG  427 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~--~~~~~~~------------~~~v~~~~~~~~~l~~~~---~dg-------~v~iwd~~~~  427 (486)
                      -.+.+|.|+--|+.....  ...+..-            .-.+.++....+.|.+--   .++       .|-++|+.++
T Consensus       200 F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~  279 (342)
T PF06433_consen  200 FVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTH  279 (342)
T ss_dssp             EEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTT
T ss_pred             EEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCC
Confidence            577889999888776432  2222211            112233333333333322   122       4888899999


Q ss_pred             eeeEEecCcccCeEEEEe--c-CCEEEEE-eCCCcEEEEeCCCCCC
Q psy9182         428 ACLRVLEGHEELVRCIRF--D-AKRIVSG-AYDGKIKVWNLVAALD  469 (486)
Q Consensus       428 ~~~~~~~~h~~~v~~~~~--~-~~~l~s~-~~dg~v~iwdl~~~~~  469 (486)
                      +.+..+... .++.+|..  + .-+|++. ..++.|.+||..++..
T Consensus       280 krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~  324 (342)
T PF06433_consen  280 KRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKL  324 (342)
T ss_dssp             EEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--E
T ss_pred             eEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcE
Confidence            999998742 35667777  3 3356554 4589999999998753

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.56  E-value=0.046  Score=56.18  Aligned_cols=190  Identities=12%  Similarity=0.074  Sum_probs=118.9

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCccc--------EEEEEe------------------cCCEEEEEeCCCcE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS--------VLCLQY------------------DERVIISGSSDSTV  296 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~------------------~~~~l~~~~~dg~i  296 (486)
                      .+..++.++.++.|.-.|..+|+.+..+......        ...+++                  .+..++.++.|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            3567777888899999999999998877633211        111222                  23478889999999


Q ss_pred             EEEECCCCcEEEEecccCccE-----------------EEEEEcCCeEEEEeC----------CCcEEEEECCCCCceee
Q psy9182         297 RVWDVNTGEMVNTLIHHCEAV-----------------LHLRFSNGMMVTCSK----------DRSIAVWDMVSPNEITL  349 (486)
Q Consensus       297 ~vwd~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~  349 (486)
                      .-.|.++|+....+... ..+                 ..-...++.+++|+.          +|.|+-+|.++++..-.
T Consensus       273 iALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            99999999998776321 111                 111223567777753          68899999999986543


Q ss_pred             EEeeecC------c--------c---cEEEEEeCCCEEEEEe------------------CCCcEEEEECCCceEEEEEc
Q psy9182         350 RRVLVGH------R--------A---AVNVVDFDEKYIVSAS------------------GDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       350 ~~~~~~~------~--------~---~v~~~~~~~~~l~~~~------------------~d~~i~iwd~~~~~~~~~~~  394 (486)
                      .......      .        .   ...++......++.+.                  ..+.|.-.|.++|+..-.++
T Consensus       352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q  431 (764)
T TIGR03074       352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ  431 (764)
T ss_pred             EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence            3211000      0        0   0111111222322211                  23557778888998887776


Q ss_pred             C-Cc----------ccEEEEEe-CCC---EEEEEeCCCcEEEEECCCCeeeEEe
Q psy9182         395 G-HK----------RGIACLQY-RDR---LVVSGSSDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       395 ~-~~----------~~v~~~~~-~~~---~l~~~~~dg~v~iwd~~~~~~~~~~  433 (486)
                      . |.          ..+..+.. +++   .++.++.+|.+.++|.++|+.+...
T Consensus       432 ~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~  485 (764)
T TIGR03074       432 TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV  485 (764)
T ss_pred             ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence            4 21          11223333 453   7899999999999999999988764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.50  E-value=0.083  Score=48.99  Aligned_cols=177  Identities=15%  Similarity=0.184  Sum_probs=108.9

Q ss_pred             CCEEEEEec----------CCeEEEEECCCc----eeeEEE--cCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCc-E
Q psy9182         244 DHKIVSGLR----------DNTIKVWDRVSL----QCIKVL--TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE-M  306 (486)
Q Consensus       244 ~~~l~~~~~----------dg~i~i~d~~~~----~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~-~  306 (486)
                      ..++++|+.          .|.|.++++...    ..+..+  ....++|+++..-+..++++. ++.|.+|++...+ .
T Consensus        42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~~lv~~~-g~~l~v~~l~~~~~l  120 (321)
T PF03178_consen   42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNGRLVVAV-GNKLYVYDLDNSKTL  120 (321)
T ss_dssp             SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETTEEEEEE-TTEEEEEEEETTSSE
T ss_pred             cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCCEEEEee-cCEEEEEEccCcccc
Confidence            356777753          289999998884    122221  234688999987444555544 4789999998877 4


Q ss_pred             EEEe-cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc-eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182         307 VNTL-IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE-ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       307 ~~~~-~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iw  382 (486)
                      ...- ......+.++...++++++|.....+.++..+.... +.... .......++++.+  +++.++.+..+|.+.++
T Consensus       121 ~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va-~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l  199 (321)
T PF03178_consen  121 LKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVA-RDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVL  199 (321)
T ss_dssp             EEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEE-EESS-BEEEEEEEE-SSSEEEEEETTSEEEEE
T ss_pred             hhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEE-ecCCCccEEEEEEecCCcEEEEEcCCCeEEEE
Confidence            4332 223457888888899999999999999886654322 22222 2234556777776  66799999999999998


Q ss_pred             ECCC-------c--eEEEEEcCC-cccEEEE---EeCC----------CEEEEEeCCCcEEEE
Q psy9182         383 NTSS-------C--EFVRTLNGH-KRGIACL---QYRD----------RLVVSGSSDNTIRLW  422 (486)
Q Consensus       383 d~~~-------~--~~~~~~~~~-~~~v~~~---~~~~----------~~l~~~~~dg~v~iw  422 (486)
                      ....       +  +......-| ...|+++   +...          ..++.++.+|.|.+.
T Consensus       200 ~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  200 RYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             EE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             EECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            8652       2  222222222 2345665   2211          247778888888743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.45  E-value=0.12  Score=49.67  Aligned_cols=70  Identities=23%  Similarity=0.408  Sum_probs=55.1

Q ss_pred             CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         396 HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       396 ~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ....+.|.++  +...++.|+.||.|.+||...+...  +....-..+.++|  +|..+++|+.-|.+.+||+.-.
T Consensus       258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            4455666666  4789999999999999999766333  3334556788999  8889999999999999998754

>KOG4441|consensus

Probab=97.45  E-value=0.015  Score=58.07  Aligned_cols=188  Identities=15%  Similarity=0.199  Sum_probs=112.9

Q ss_pred             EEEeCCCEEEEEecC------CeEEEEECCCceeeE--EEcCCcccEEEEEecCCEEEEEeCCCc-----EEEEECCCCc
Q psy9182         239 CLQYDDHKIVSGLRD------NTIKVWDRVSLQCIK--VLTGHTGSVLCLQYDERVIISGSSDST-----VRVWDVNTGE  305 (486)
Q Consensus       239 ~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg~-----i~vwd~~~~~  305 (486)
                      ....++...++|+.|      ..+..||..+.+=..  .+.......-....+|...++|+.||.     +..||..+.+
T Consensus       328 ~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~  407 (571)
T KOG4441|consen  328 VAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNK  407 (571)
T ss_pred             EEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCc
Confidence            334577888999988      357788877655221  122222222333448899999999864     7778877654


Q ss_pred             EEE--EecccCccEEEEEEcCCeEEEEeCCC------cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC
Q psy9182         306 MVN--TLIHHCEAVLHLRFSNGMMVTCSKDR------SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR  377 (486)
Q Consensus       306 ~~~--~~~~~~~~i~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~  377 (486)
                      ...  .+...........+.+...++|+.++      .+..||..++.-. ....+............++...+.|+.|+
T Consensus       408 W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~-~~~~M~~~R~~~g~a~~~~~iYvvGG~~~  486 (571)
T KOG4441|consen  408 WTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWT-LIAPMNTRRSGFGVAVLNGKIYVVGGFDG  486 (571)
T ss_pred             ccccCCCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCcee-ecCCcccccccceEEEECCEEEEECCccC
Confidence            322  22222223334444556777777544      5778888776422 11222222333334555888888888776


Q ss_pred             c-----EEEEECCCceE--EEEEcCCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCC
Q psy9182         378 T-----IKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECG  427 (486)
Q Consensus       378 ~-----i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~dg-----~v~iwd~~~~  427 (486)
                      .     +..||..+.+.  +.........+.+...++...++|+.||     +|..||..+.
T Consensus       487 ~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  487 TSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             CCccceEEEEcCCCCceeEcccCccccccccEEEECCEEEEEecccCccccceeEEcCCCCC
Confidence            3     77788877543  3333445555666777888899999876     4666766543

>KOG1008|consensus

Probab=97.40  E-value=4.9e-05  Score=72.06  Aligned_cols=190  Identities=16%  Similarity=0.264  Sum_probs=115.7

Q ss_pred             cEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEE--EEecccCccEEEEEEcC---CeEEEEe----CCCcEEEEECC
Q psy9182         276 SVLCLQY----DERVIISGSSDSTVRVWDVNTGEMV--NTLIHHCEAVLHLRFSN---GMMVTCS----KDRSIAVWDMV  342 (486)
Q Consensus       276 ~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~i~~~~~~~---~~l~~~~----~dg~i~i~d~~  342 (486)
                      .+.|+++    +...+++|..+|.|.+-.++...--  .....+....++++|++   +.|++|-    .|..+.|||+.
T Consensus        58 y~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~  137 (783)
T KOG1008|consen   58 YVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDIN  137 (783)
T ss_pred             CceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecc
Confidence            4455555    3357888889999999888754322  23356677888999975   3666663    36679999998


Q ss_pred             CCC--ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-ceEEEEEcC-CcccEEEEEeCCCEEEEEeCC
Q psy9182         343 SPN--EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS-CEFVRTLNG-HKRGIACLQYRDRLVVSGSSD  416 (486)
Q Consensus       343 ~~~--~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d  416 (486)
                      +.-  +........+......+++|  +.+++.+|.....+.++|++. ......+.. -..+++.=.|.++++++-. |
T Consensus       138 s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~-d  216 (783)
T KOG1008|consen  138 SLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS-D  216 (783)
T ss_pred             cccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc-c
Confidence            762  11111111122334446677  778888998888999999883 222222222 1122333334678887766 9


Q ss_pred             CcEEEEE-CCCC-eeeEEecCcc----cCeEEEEe---cCCEEEEEe-CCCcEEEEeCCC
Q psy9182         417 NTIRLWD-IECG-ACLRVLEGHE----ELVRCIRF---DAKRIVSGA-YDGKIKVWNLVA  466 (486)
Q Consensus       417 g~v~iwd-~~~~-~~~~~~~~h~----~~v~~~~~---~~~~l~s~~-~dg~v~iwdl~~  466 (486)
                      |.|.+|| ..+- .++..+...+    ..+..++|   ....+++.. ..++|+++|+..
T Consensus       217 g~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  217 GDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             CceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            9999999 3332 2333332222    24888888   223344444 567899999865

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.39  E-value=0.023  Score=57.77  Aligned_cols=130  Identities=16%  Similarity=0.193  Sum_probs=93.5

Q ss_pred             ecCCeEEEEECCCceeeEEEcCCccc-EEEEEec-------CCEEEEEeCCCcEEEEECCCCc--EEEEe---cccCccE
Q psy9182         251 LRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQYD-------ERVIISGSSDSTVRVWDVNTGE--MVNTL---IHHCEAV  317 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~-------~~~l~~~~~dg~i~vwd~~~~~--~~~~~---~~~~~~i  317 (486)
                      .....|+-.|+..|+.+..++.|... |..+..+       +...+.|-.+..+..||.+-..  ++...   -......
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F  580 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF  580 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence            34578999999999999999987755 7777662       3456778888899999998532  22211   1123456


Q ss_pred             EEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         318 LHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       318 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      .|++-. .+.+|+|+.+|.|++||-. +..  ....+.+-..+|..+..  ||+++++.+. ..|.+++.
T Consensus       581 s~~aTt~~G~iavgs~~G~IRLyd~~-g~~--AKT~lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  581 SCFATTEDGYIAVGSNKGDIRLYDRL-GKR--AKTALPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             eEEEecCCceEEEEeCCCcEEeeccc-chh--hhhcCCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence            677666 4699999999999999943 322  23455677788988887  9999887765 56777774

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.37  E-value=0.028  Score=41.61  Aligned_cols=87  Identities=16%  Similarity=0.225  Sum_probs=62.7

Q ss_pred             CEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~  323 (486)
                      +.|++|+.|..|++|+-  .+.+..+.. .+.|+++.. .+..++.+..+|+|-+|+-  .+.+...+.. ..+.++.+.
T Consensus        16 ~eLlvGs~D~~IRvf~~--~e~~~Ei~e-~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~--~~RlWRiKSK-~~~~~~~~~   89 (111)
T PF14783_consen   16 NELLVGSDDFEIRVFKG--DEIVAEITE-TDKVTSLCSLGGGRFAYALANGTVGVYDR--SQRLWRIKSK-NQVTSMAFY   89 (111)
T ss_pred             ceEEEecCCcEEEEEeC--CcEEEEEec-ccceEEEEEcCCCEEEEEecCCEEEEEeC--cceeeeeccC-CCeEEEEEE
Confidence            57999999999999974  355666653 456777766 6788999999999999986  3444555443 335565553


Q ss_pred             C-C-----eEEEEeCCCcEE
Q psy9182         324 N-G-----MMVTCSKDRSIA  337 (486)
Q Consensus       324 ~-~-----~l~~~~~dg~i~  337 (486)
                      + +     .|++|-.+|.|-
T Consensus        90 D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   90 DINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             cCCCCCceEEEEEecCCeEE
Confidence            2 2     788888888774

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.36  E-value=0.098  Score=46.75  Aligned_cols=216  Identities=15%  Similarity=0.139  Sum_probs=126.4

Q ss_pred             EEEe-CCCEEEEEecCCe-EEEEECCCceeeEEEcCCcccE----EEEEecCCEEEEEeC-----CCcEEEEECC-CCcE
Q psy9182         239 CLQY-DDHKIVSGLRDNT-IKVWDRVSLQCIKVLTGHTGSV----LCLQYDERVIISGSS-----DSTVRVWDVN-TGEM  306 (486)
Q Consensus       239 ~~~~-~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~v----~~~~~~~~~l~~~~~-----dg~i~vwd~~-~~~~  306 (486)
                      +.+| .+..++.+-.-|. ..+||..+++....+....+.-    -+++.||++|++.-.     .|.|-|||.. +-+.
T Consensus        11 a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~r   90 (305)
T PF07433_consen   11 AAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRR   90 (305)
T ss_pred             eeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEE
Confidence            3455 4556777777774 7889999999887776433332    234558999988644     4889999998 5667


Q ss_pred             EEEecccCccEEEEEEcCC--eEEEE------------------eCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe
Q psy9182         307 VNTLIHHCEAVLHLRFSNG--MMVTC------------------SKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF  365 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~~--~l~~~------------------~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~  365 (486)
                      +.++..+.-.-..+.+.++  .|+++                  +.+-.+...|..+++.+...... ..|..++.-+++
T Consensus        91 i~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~  170 (305)
T PF07433_consen   91 IGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAV  170 (305)
T ss_pred             EeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEe
Confidence            7777665444444444433  34443                  22334555666666654322211 346667777777


Q ss_pred             --CCCEEEEEeCCCc-------EEEEECCCceEEEEEc-------CCcccEEEEEeC--CCEEEEE-eCCCcEEEEECCC
Q psy9182         366 --DEKYIVSASGDRT-------IKVWNTSSCEFVRTLN-------GHKRGIACLQYR--DRLVVSG-SSDNTIRLWDIEC  426 (486)
Q Consensus       366 --~~~~l~~~~~d~~-------i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~--~~~l~~~-~~dg~v~iwd~~~  426 (486)
                        +|..++..-..|.       |.+++.  ++.+..+.       .-.+-+-+++++  +.++++. -..|.+.+||..+
T Consensus       171 ~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~t  248 (305)
T PF07433_consen  171 DGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAAT  248 (305)
T ss_pred             cCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCC
Confidence              3333333322221       333332  22222222       223456777774  5566544 4678899999999


Q ss_pred             CeeeEEecCcccCeEEEEe-cCCEEEEEeCCCcE
Q psy9182         427 GACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKI  459 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~-~~~~l~s~~~dg~v  459 (486)
                      ++.+....-.  .+..++. .+.++++.+. |.+
T Consensus       249 g~~~~~~~l~--D~cGva~~~~~f~~ssG~-G~~  279 (305)
T PF07433_consen  249 GRLLGSVPLP--DACGVAPTDDGFLVSSGQ-GQL  279 (305)
T ss_pred             CCEeeccccC--ceeeeeecCCceEEeCCC-ccE
Confidence            9988776533  3556666 4446666554 443

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.29  E-value=0.0088  Score=60.66  Aligned_cols=141  Identities=14%  Similarity=0.184  Sum_probs=96.8

Q ss_pred             cCCEEEEE-eCCCcEEEEECCCCcEEEEecccCcc-EEEEEEc-------CCeEEEEeCCCcEEEEECCCCCceeeEEe-
Q psy9182         283 DERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEA-VLHLRFS-------NGMMVTCSKDRSIAVWDMVSPNEITLRRV-  352 (486)
Q Consensus       283 ~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~-i~~~~~~-------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-  352 (486)
                      +.++|+.- .....|+-.|++.|+.+..+..+... |..++..       +...++|-.+..+..||.+-......... 
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence            33454443 34578999999999999999877654 7777654       34678888999999999987542111111 


Q ss_pred             -eecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         353 -LVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       353 -~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~  424 (486)
                       .-.......|++- ...+||+|+.+|.||+||--..+....+.+-..+|..+..  +|+++++.+ +..+.+++.
T Consensus       572 k~Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  572 KQYSSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             cccccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence             1123344556666 5679999999999999995433334456677788887766  688887665 556666664

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG2444|consensus

Probab=97.28  E-value=0.00045  Score=57.46  Aligned_cols=138  Identities=14%  Similarity=0.157  Sum_probs=82.8

Q ss_pred             EEEEEeCCCcEEEEECCCCcEEEEe-cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEE
Q psy9182         286 VIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD  364 (486)
Q Consensus       286 ~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~  364 (486)
                      .+..-+.||.|.-++++..+....- ..+... ..+.--...+++|+.+|.|++|+........  .........+.++-
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~--d~~~s~~e~i~~~I  108 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERFIDEG-QRVVTASAKLMVGTSDGAVYVFNWNLEGAHS--DRVCSGEESIDLGI  108 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhhhhcc-eeecccCceEEeecccceEEEecCCccchHH--Hhhhcccccceecc
Confidence            4555677888888887654332111 111111 2222235689999999999999876322111  11112223333333


Q ss_pred             e---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-ccEEEEEe--CCCEEEEE--eCCCcEEEEECCC
Q psy9182         365 F---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQY--RDRLVVSG--SSDNTIRLWDIEC  426 (486)
Q Consensus       365 ~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~--~~dg~v~iwd~~~  426 (486)
                      +   ++.+..++..||.|+.|++.-.+.+.....|. .+...+..  .++.++.+  |.|..++.|++..
T Consensus       109 p~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  109 PNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             ccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence            3   55688899999999999999888887777777 33322222  35566666  6667777777653

>smart00320 WD40 WD40 repeats

Probab=97.24  E-value=0.0011  Score=38.64  Aligned_cols=37  Identities=41%  Similarity=0.779  Sum_probs=27.6

Q ss_pred             CeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ++++..+..|...|.++.|  ++..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3456666777778888888  456788888888888885

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.16  E-value=0.25  Score=47.38  Aligned_cols=134  Identities=10%  Similarity=0.150  Sum_probs=66.0

Q ss_pred             cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccE
Q psy9182         283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV  360 (486)
Q Consensus       283 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v  360 (486)
                      +....+....++.+.+.+-...+.   +. ..+++..++.+++  .++.-..+|.+.+....-.+...  ....+.....
T Consensus       189 ~~~~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~--e~~~~~~~~p  262 (410)
T PF04841_consen  189 DRVVEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLC--EFDTDSKSPP  262 (410)
T ss_pred             CcceEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeE--EeecCcCCCC
Confidence            334444444455555444332211   11 2457888888854  77777888999888765444332  1111223344


Q ss_pred             EEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC
Q psy9182         361 NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       361 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  435 (486)
                      ..+.|-|+       |..+..|+    ..+..+. ..+.-....+++..++..-.|| |||..-..-+.++....
T Consensus       263 ~~~~WCG~-------dav~l~~~----~~l~lvg-~~~~~~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~Vp~  324 (410)
T PF04841_consen  263 KQMAWCGN-------DAVVLSWE----DELLLVG-PDGDSISFWYDGPVILVSEIDG-VRIITSTSHEFLQRVPD  324 (410)
T ss_pred             cEEEEECC-------CcEEEEeC----CEEEEEC-CCCCceEEeccCceEEeccCCc-eEEEeCCceEEEEECCH
Confidence            45556333       33333331    1111111 1122223333444445555566 78887666666666543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.05  E-value=0.071  Score=52.40  Aligned_cols=181  Identities=13%  Similarity=0.060  Sum_probs=98.3

Q ss_pred             EeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcc-cEEEEEecCCEEEEEeCC----CcEEEEECCCCcEEEEecccC
Q psy9182         241 QYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQYDERVIISGSSD----STVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       241 ~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~  314 (486)
                      .+||+.+. ..-..+.+.+.|..+.+....+..-.. ....+..+++++++.+.+    +++..-+..+...+..+..  
T Consensus       201 pnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni--  278 (635)
T PRK02888        201 PNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI--  278 (635)
T ss_pred             CCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch--
Confidence            34665543 233456788888888777666543222 233445578888777532    2222222222111111110  


Q ss_pred             ccEEEEEEcCCeEEEEeCCCcEEEEECCC----CCceeeEEeeecCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCceE
Q psy9182         315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVS----PNEITLRRVLVGHRAAVNVVDFDEKYIVSAS-GDRTIKVWNTSSCEF  389 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~  389 (486)
                      ..+..+.-.++....  .++.|.+.|.++    +... ......+....-..+++||+++++++ .+.++.+.|+++.+.
T Consensus       279 ~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v-~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~  355 (635)
T PRK02888        279 ARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSAL-TRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD  355 (635)
T ss_pred             HHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcce-EEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence            000011111233333  367899999887    2222 22333344444445667999887766 488999999988553


Q ss_pred             ------------EEEEcCCccc-EEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         390 ------------VRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       390 ------------~~~~~~~~~~-v~~~~~~~~~l~~~~~dg~v~iwd~~~  426 (486)
                                  +.+.+--.++ -+.+.-+|+...+-..|..|..||+.+
T Consensus       356 ~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        356 LFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             hhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence                        3333332222 233433467778888899999999875

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.04  E-value=0.0089  Score=57.01  Aligned_cols=88  Identities=13%  Similarity=0.168  Sum_probs=62.1

Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVS  412 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~  412 (486)
                      .+|++..++..............+.++++  +...++.|+.||.|.+||...+...  +....-..+.++|  +|.++++
T Consensus       239 ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V  316 (545)
T PF11768_consen  239 CIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVV  316 (545)
T ss_pred             EEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEE
Confidence            45666554433222233355667777777  7889999999999999998765332  2233445677788  4789999


Q ss_pred             EeCCCcEEEEECCC
Q psy9182         413 GSSDNTIRLWDIEC  426 (486)
Q Consensus       413 ~~~dg~v~iwd~~~  426 (486)
                      |+..|.+.+||+.-
T Consensus       317 ~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  317 GSEQGELQCFDMAL  330 (545)
T ss_pred             EcCCceEEEEEeec
Confidence            99999999999864

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=97.03  E-value=0.31  Score=46.21  Aligned_cols=194  Identities=13%  Similarity=0.043  Sum_probs=114.7

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCc--ccEEE-EEecCCEEEEEeCCCcEEEEECCCCcEEEEecccC-ccE-
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT--GSVLC-LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAV-  317 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~v~~-~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i-  317 (486)
                      .+..++++..+|.|.-.|..+++.+.....-.  ..+.+ +......++.++.+|.++.+|.++|+.+....... ..+ 
T Consensus        67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~  146 (370)
T COG1520          67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYA  146 (370)
T ss_pred             eCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEe
Confidence            44556666888999999999888765433221  11111 11123448888899999999999999988876655 111 


Q ss_pred             EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEE-EEEeCCCEEEEEeC--CCcEEEEECCCceEEEEEc
Q psy9182         318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN-VVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~  394 (486)
                      .........++.++.++.+...|..++...-.......-...+. ........++.+..  ++.+.-.|..+|......+
T Consensus       147 ~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~  226 (370)
T COG1520         147 SPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKWSQK  226 (370)
T ss_pred             cCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEeeeee
Confidence            11222344666666789999999888765432222110000110 01123344445544  6678888888888776643


Q ss_pred             CCc----ccE-EEEEe------CCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182         395 GHK----RGI-ACLQY------RDRLVVSGSSDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       395 ~~~----~~v-~~~~~------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                      .+.    ..+ ..-..      .+.-+..++.++.+...|..+|+.+..+...
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~  279 (370)
T COG1520         227 VSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG  279 (370)
T ss_pred             eecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence            211    111 00011      1333467778888999999999999888764

>PRK02888 nitrous-oxide reductase; Validated

Probab=96.94  E-value=0.17  Score=49.83  Aligned_cols=174  Identities=14%  Similarity=0.067  Sum_probs=94.0

Q ss_pred             ceEEEEeCCCEEEEEecCC----eEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCC-----CcE
Q psy9182         236 GVYCLQYDDHKIVSGLRDN----TIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT-----GEM  306 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-----~~~  306 (486)
                      ....++++++++++.+.+.    ++...+..+...+..+.-  ..+..+.-+|++...+  ++.|.+.|.++     .+.
T Consensus       238 d~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni--~~iea~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v  313 (635)
T PRK02888        238 DNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI--ARIEEAVKAGKFKTIG--GSKVPVVDGRKAANAGSAL  313 (635)
T ss_pred             ccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch--HHHHHhhhCCCEEEEC--CCEEEEEECCccccCCcce
Confidence            3456677888887775322    233333222221111110  1111122267766653  57899999988     344


Q ss_pred             EEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCcee----------eEEeeecCcccEEEEEeCCCEEEEE
Q psy9182         307 VNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEIT----------LRRVLVGHRAAVNVVDFDEKYIVSA  373 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~l~~~  373 (486)
                      +..+.. ......+.++|+   .++++..+..|.++|+.+.+...          .-....+....-+.+.-+|+...+-
T Consensus       314 ~~yIPV-GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytsl  392 (635)
T PRK02888        314 TRYVPV-PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTL  392 (635)
T ss_pred             EEEEEC-CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeE
Confidence            544443 344566777765   45555669999999998755310          1111112222222333356677777


Q ss_pred             eCCCcEEEEECCC----------ceEEEEEcCCcccEEE-------EEeCCCEEEEEe
Q psy9182         374 SGDRTIKVWNTSS----------CEFVRTLNGHKRGIAC-------LQYRDRLVVSGS  414 (486)
Q Consensus       374 ~~d~~i~iwd~~~----------~~~~~~~~~~~~~v~~-------~~~~~~~l~~~~  414 (486)
                      .-|..|..||+.+          ...+..+.-|..+--.       ...+|++|++..
T Consensus       393 f~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n  450 (635)
T PRK02888        393 FLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN  450 (635)
T ss_pred             eecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence            8899999999876          3445555544433211       133567776654

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.88  E-value=0.18  Score=48.52  Aligned_cols=131  Identities=10%  Similarity=0.136  Sum_probs=67.6

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC-----------cEEEEe
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG-----------EMVNTL  310 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~-----------~~~~~~  310 (486)
                      |..|...+.+ .|.+||+.+++.+..+...  +|..+.|  ++++++..+.+ .+.+++....           .....+
T Consensus       117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~  192 (443)
T PF04053_consen  117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELI  192 (443)
T ss_dssp             SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEE
T ss_pred             CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEE
Confidence            6666666544 8999999999999999844  3788888  57788888765 6888775433           022333


Q ss_pred             cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         311 IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~  385 (486)
                      ......|.+..|.++.++-.+.. .++.  +..++... ...+   ..++.-+..  ..+.++....|+.+..+.+.
T Consensus       193 ~E~~~~IkSg~W~~d~fiYtT~~-~lkY--l~~Ge~~~-i~~l---d~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  193 HEISERIKSGCWVEDCFIYTTSN-HLKY--LVNGETGI-IAHL---DKPLYLLGYLPKENRLYLIDRDGNVISYELD  262 (443)
T ss_dssp             EEE-S--SEEEEETTEEEEE-TT-EEEE--EETTEEEE-EEE----SS--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred             EEecceeEEEEEEcCEEEEEcCC-eEEE--EEcCCcce-EEEc---CCceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence            33256788888887755555544 6654  33333221 1111   222333333  34666666666666666544

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PHA03098 kelch-like protein; Provisional

Probab=96.85  E-value=0.069  Score=53.54  Aligned_cols=188  Identities=14%  Similarity=0.167  Sum_probs=97.6

Q ss_pred             EEEeCCCEEEEEecCC------eEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCCc
Q psy9182         239 CLQYDDHKIVSGLRDN------TIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTGE  305 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~  305 (486)
                      +...++..++.|+.++      .+..||..+.+-...  +.........+..++...+.|+.+     ..+..||..+++
T Consensus       290 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~  369 (534)
T PHA03098        290 SVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK  369 (534)
T ss_pred             EEEECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence            3445677777777543      577888777654221  111112223344578888888865     347788887765


Q ss_pred             EEEE--ecccCccEEEEEEcCCeEEEEeCC------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182         306 MVNT--LIHHCEAVLHLRFSNGMMVTCSKD------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-  376 (486)
Q Consensus       306 ~~~~--~~~~~~~i~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-  376 (486)
                      ....  +.............+..++.|+.+      +.+..||..+.+-.. ............++..++...+.|+.+ 
T Consensus       370 W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~  448 (534)
T PHA03098        370 WREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSK-GSPLPISHYGGCAIYHDGKIYVIGGISY  448 (534)
T ss_pred             eeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeee-cCCCCccccCceEEEECCEEEEECCccC
Confidence            4321  111111122233344455666532      458889987653221 111111112223344467766666643 


Q ss_pred             -------CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCC
Q psy9182         377 -------RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECG  427 (486)
Q Consensus       377 -------~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~  427 (486)
                             ..+.+||..+.+-..  .+.........+..++.+++.|+.+     +.|.+||..+.
T Consensus       449 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        449 IDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CCCCcccceEEEecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence                   238889987754322  1221122223344577777777654     46778877654

>PHA03098 kelch-like protein; Provisional

Probab=96.82  E-value=0.09  Score=52.72  Aligned_cols=188  Identities=15%  Similarity=0.148  Sum_probs=100.1

Q ss_pred             EEEecCCEEEEEeCCC------cEEEEECCCCcEEEEe--cccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCC
Q psy9182         279 CLQYDERVIISGSSDS------TVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPN  345 (486)
Q Consensus       279 ~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~  345 (486)
                      ++..++..++.|+.++      .+..||..+++....-  .........+...+..++.|+.+     ..+..||..+..
T Consensus       290 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~  369 (534)
T PHA03098        290 SVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK  369 (534)
T ss_pred             EEEECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence            3444677777776543      5778898876653211  11112223334445566677755     347778877654


Q ss_pred             ceeeEEeeecCcccEEEEEeCCCEEEEEeCC------CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-
Q psy9182         346 EITLRRVLVGHRAAVNVVDFDEKYIVSASGD------RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-  416 (486)
Q Consensus       346 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-  416 (486)
                      -.. ...+............+++..+.|+.+      ..+..||..+.+-..  .+........++..++.+.+.|+.+ 
T Consensus       370 W~~-~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~  448 (534)
T PHA03098        370 WRE-EPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISY  448 (534)
T ss_pred             eee-CCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccC
Confidence            211 111111122222334477777777632      458889987754322  1221122233445567777777643 


Q ss_pred             -------CcEEEEECCCCee--eEEecCcccCeEEEEecCCEEEEEeCC-----CcEEEEeCCCC
Q psy9182         417 -------NTIRLWDIECGAC--LRVLEGHEELVRCIRFDAKRIVSGAYD-----GKIKVWNLVAA  467 (486)
Q Consensus       417 -------g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l~s~~~d-----g~v~iwdl~~~  467 (486)
                             ..+.+||..+++=  +..+.........+.++++.++.||.+     +.|.+||..+.
T Consensus       449 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        449 IDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CCCCcccceEEEecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence                   2388899876532  222221122223344477777777764     46888888764

>KOG2395|consensus

Probab=96.81  E-value=0.027  Score=53.06  Aligned_cols=135  Identities=13%  Similarity=0.195  Sum_probs=89.2

Q ss_pred             EEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---------eEEEEeCCCcEEEEECCCCCceeeEEeeecC-
Q psy9182         287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---------MMVTCSKDRSIAVWDMVSPNEITLRRVLVGH-  356 (486)
Q Consensus       287 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-  356 (486)
                      +..+.....++-.|++.|+.+.++..+.. |.-+.+.|+         .-++|-.+..|.-||++-...- ......+| 
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-kl~~~q~kq  426 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-KLAVVQSKQ  426 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-eeeeeeccc
Confidence            44455567799999999999999987766 444444432         4567788899999999854431 11111122 


Q ss_pred             ---cccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         357 ---RAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       357 ---~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~  424 (486)
                         .....|++- ...++++|+.+|.|++||--..+....+++-..+|..+..  +|++++..+ +..+.+-++
T Consensus       427 y~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t  499 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT  499 (644)
T ss_pred             cccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence               223334444 6679999999999999997433344556777778876654  688776554 556666654

>KOG2079|consensus

Probab=96.79  E-value=0.0055  Score=62.29  Aligned_cols=107  Identities=17%  Similarity=0.329  Sum_probs=79.9

Q ss_pred             cccEEEEEeCCCEEEEEeCCCcEEEEECCCc-eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEe
Q psy9182         357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSC-EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       357 ~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~  433 (486)
                      ...+.+.+.-+..++.|++.|.+...|.... .+...-..-.++|++++++  |..++.|-.+|.|.+||+..++.++.+
T Consensus        89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i  168 (1206)
T KOG2079|consen   89 AAGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVI  168 (1206)
T ss_pred             CcceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeee
Confidence            4455556666778899999999999887653 2222223345789999984  899999999999999999999999999


Q ss_pred             cCcccCeEEEEe-----cCCEEEEEeCCCcEEEEeCC
Q psy9182         434 EGHEELVRCIRF-----DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       434 ~~h~~~v~~~~~-----~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ..|..+.+++-+     ++..++++...|.  +|.+.
T Consensus       169 ~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  169 TEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             eecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            888777776655     4445778777776  67654

>KOG2079|consensus

Probab=96.79  E-value=0.043  Score=56.18  Aligned_cols=106  Identities=21%  Similarity=0.370  Sum_probs=75.4

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCcee-eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC-IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                      ...+.+....+..++.|+..|.+-..|....-. ...=..-.++|+++++  +|..++.|-.+|.|.+||+.+++..+.+
T Consensus        89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i  168 (1206)
T KOG2079|consen   89 AAGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVI  168 (1206)
T ss_pred             CcceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeee
Confidence            344455555667789999999998888765311 1111224578999999  8999999999999999999999999888


Q ss_pred             cccCccEEEEEE----cCC-eEEEEeCCCcEEEEEC
Q psy9182         311 IHHCEAVLHLRF----SNG-MMVTCSKDRSIAVWDM  341 (486)
Q Consensus       311 ~~~~~~i~~~~~----~~~-~l~~~~~dg~i~i~d~  341 (486)
                      ..+..+.+.+-+    +.+ .++++...|.  +|.+
T Consensus       169 ~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  169 TEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             eecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            777666555444    333 5777777675  5554

>PHA02790 Kelch-like protein; Provisional

Probab=96.74  E-value=0.13  Score=50.62  Aligned_cols=182  Identities=10%  Similarity=0.061  Sum_probs=97.1

Q ss_pred             eCCCEEEEEecCC-----eEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC--CcEEEEECCCCcEEE--Ee
Q psy9182         242 YDDHKIVSGLRDN-----TIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD--STVRVWDVNTGEMVN--TL  310 (486)
Q Consensus       242 ~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~--~~  310 (486)
                      .++..+++|+.++     .+..||..+++-...  +.........+..++...+.|+.+  ..+..||..+++...  .+
T Consensus       270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l  349 (480)
T PHA02790        270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL  349 (480)
T ss_pred             ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence            4566677777543     567788776543221  111111223344578777888764  358888887654332  11


Q ss_pred             cccCccEEEEEEcCCeEEEEeCCC---cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCc
Q psy9182         311 IHHCEAVLHLRFSNGMMVTCSKDR---SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                      .............+...+.|+.++   .+..||.++..-. ..............+..++...+.|+   .+.+||.++.
T Consensus       350 ~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~-~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~  425 (480)
T PHA02790        350 LKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQ-FGPSTYYPHYKSCALVFGRRLFLVGR---NAEFYCESSN  425 (480)
T ss_pred             CCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEE-eCCCCCCccccceEEEECCEEEEECC---ceEEecCCCC
Confidence            111122233344455666666543   4778887664321 11111111122233445777777663   5778988765


Q ss_pred             eEE--EEEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCC
Q psy9182         388 EFV--RTLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECG  427 (486)
Q Consensus       388 ~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~  427 (486)
                      +-.  ..+............++++.+.|+.+     ..|..||..++
T Consensus       426 ~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        426 TWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             cEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence            433  22222233445556688888888754     35667777654

>KOG4640|consensus

Probab=96.70  E-value=0.01  Score=56.95  Aligned_cols=87  Identities=14%  Similarity=0.129  Sum_probs=69.9

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEE-EEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-cc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL-CLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HH  313 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~  313 (486)
                      .-+.|.-..+|.+..+|.|.+.... .+.+.++.-|...++ +++|  ||+.+++|-.||+|++.|++++..+.... ..
T Consensus        26 ~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~  104 (665)
T KOG4640|consen   26 IEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSV  104 (665)
T ss_pred             EEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecccccc
Confidence            4455666789999999999999887 788888887777777 8999  89999999999999999999998877632 23


Q ss_pred             CccEEEEEEcCC
Q psy9182         314 CEAVLHLRFSNG  325 (486)
Q Consensus       314 ~~~i~~~~~~~~  325 (486)
                      ...|.++.|++.
T Consensus       105 e~~is~~~w~~~  116 (665)
T KOG4640|consen  105 ETDISKGIWDRI  116 (665)
T ss_pred             ccchheeecccc
Confidence            455666666543

>PHA02790 Kelch-like protein; Provisional

Probab=96.68  E-value=0.12  Score=50.93  Aligned_cols=182  Identities=13%  Similarity=0.057  Sum_probs=97.9

Q ss_pred             ecCCEEEEEeCCC-----cEEEEECCCCcEEEEe--cccCccEEEEEEcCCeEEEEeCC--CcEEEEECCCCCceeeEEe
Q psy9182         282 YDERVIISGSSDS-----TVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNGMMVTCSKD--RSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       282 ~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~  352 (486)
                      .++..+++|+.++     .+..||..+++....-  .........+...+...++|+.+  ..+..||..++.-. ....
T Consensus       270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~-~~~~  348 (480)
T PHA02790        270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWV-NMPS  348 (480)
T ss_pred             ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEE-ECCC
Confidence            3556667776543     4777888876543321  11111222333444456666643  45788887654321 1111


Q ss_pred             eecCcccEEEEEeCCCEEEEEeCCC---cEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182         353 LVGHRAAVNVVDFDEKYIVSASGDR---TIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       353 ~~~~~~~v~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                      +............+|+..+.|+.++   .+..||.++.+-..  .+............++.+.+.|+   .+.+||.+++
T Consensus       349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~ydp~~~  425 (480)
T PHA02790        349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR---NAEFYCESSN  425 (480)
T ss_pred             CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEECC---ceEEecCCCC
Confidence            2222223334455888888887553   47788887654332  11212222334456777777764   5788988754


Q ss_pred             e--eeEEecCcccCeEEEEecCCEEEEEeCC-----CcEEEEeCCCC
Q psy9182         428 A--CLRVLEGHEELVRCIRFDAKRIVSGAYD-----GKIKVWNLVAA  467 (486)
Q Consensus       428 ~--~~~~~~~h~~~v~~~~~~~~~l~s~~~d-----g~v~iwdl~~~  467 (486)
                      +  .+..+.........+..+++..+.||.+     ..+..||..+.
T Consensus       426 ~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        426 TWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             cEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence            3  2232322233344455588888888865     35777877643

>smart00320 WD40 WD40 repeats

Probab=96.67  E-value=0.0063  Score=35.10  Aligned_cols=37  Identities=38%  Similarity=0.756  Sum_probs=29.5

Q ss_pred             ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEE
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD  300 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd  300 (486)
                      +++...+..|...|.++.+  ++..+++++.|+.+++||
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3455666778888999988  457899999999999986

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.65  E-value=0.63  Score=44.87  Aligned_cols=213  Identities=13%  Similarity=0.155  Sum_probs=105.0

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      ...+..+|+++.+++ +.+|.-.||.....+....     +.-..+.| ..+.+++-..++.|.++.--+.+....+...
T Consensus        35 p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~  108 (443)
T PF04053_consen   35 PQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAF-----GSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLP  108 (443)
T ss_dssp             -SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEE-----EE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-----S
T ss_pred             CeeEEECCCCCEEEE-EcCCEEEEEEccCCccccc-----CceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcCC
Confidence            455677889998888 5688888887554443322     22234555 4456777777888999632222222233221


Q ss_pred             CccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc----
Q psy9182         314 CEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC----  387 (486)
Q Consensus       314 ~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~----  387 (486)
                       ..+..+.. +..|...+ ++.|.+||..+++.+....     -..|..+.|  ++++++..+.+ .+.+++....    
T Consensus       109 -~~~~~If~-G~LL~~~~-~~~i~~yDw~~~~~i~~i~-----v~~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~  179 (443)
T PF04053_consen  109 -FSVEKIFG-GNLLGVKS-SDFICFYDWETGKLIRRID-----VSAVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAA  179 (443)
T ss_dssp             -S-EEEEE--SSSEEEEE-TTEEEEE-TTT--EEEEES-----S-E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHH
T ss_pred             -cccceEEc-CcEEEEEC-CCCEEEEEhhHcceeeEEe-----cCCCcEEEEECCCCEEEEEeCC-eEEEEEecchhccc
Confidence             12333333 44555554 4589999999887653222     223788888  57788888764 6777775432    


Q ss_pred             -------eEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCc
Q psy9182         388 -------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGK  458 (486)
Q Consensus       388 -------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~  458 (486)
                             .....+..-...|.+..|.++.++-.+.. .++-  +-.|+. ..+..-..++.=+..  ..+.+.....|+.
T Consensus       180 ~~~~g~e~~f~~~~E~~~~IkSg~W~~d~fiYtT~~-~lkY--l~~Ge~-~~i~~ld~~~yllgy~~~~~~ly~~Dr~~~  255 (443)
T PF04053_consen  180 IPEEGVEDAFELIHEISERIKSGCWVEDCFIYTTSN-HLKY--LVNGET-GIIAHLDKPLYLLGYLPKENRLYLIDRDGN  255 (443)
T ss_dssp             BTTTB-GGGEEEEEEE-S--SEEEEETTEEEEE-TT-EEEE--EETTEE-EEEEE-SS--EEEEEETTTTEEEEE-TT--
T ss_pred             ccccCchhceEEEEEecceeEEEEEEcCEEEEEcCC-eEEE--EEcCCc-ceEEEcCCceEEEEEEccCCEEEEEECCCC
Confidence                   02222222245666677766655555444 5555  333332 222212334444455  4488888889999


Q ss_pred             EEEEeCCC
Q psy9182         459 IKVWNLVA  466 (486)
Q Consensus       459 v~iwdl~~  466 (486)
                      |..+.++.
T Consensus       256 v~~~~ld~  263 (443)
T PF04053_consen  256 VISYELDL  263 (443)
T ss_dssp             EEEEE--H
T ss_pred             EEEEEECH
Confidence            98887763

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.59  E-value=1.1  Score=46.54  Aligned_cols=186  Identities=12%  Similarity=0.059  Sum_probs=112.3

Q ss_pred             cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc--------EEEEEE------------------cCCeEEEEeCCCcE
Q psy9182         283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA--------VLHLRF------------------SNGMMVTCSKDRSI  336 (486)
Q Consensus       283 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--------i~~~~~------------------~~~~l~~~~~dg~i  336 (486)
                      .+..++.++.++.|.-.|.++|+.+.++......        ...+.+                  .++.++.++.|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            3567777788899999999999988877543211        111222                  23488899999999


Q ss_pred             EEEECCCCCceeeEEe-----e----ecCc-c--cEEEE-EeCCCEEEEEeC----------CCcEEEEECCCceEEEEE
Q psy9182         337 AVWDMVSPNEITLRRV-----L----VGHR-A--AVNVV-DFDEKYIVSASG----------DRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~-----~----~~~~-~--~v~~~-~~~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~  393 (486)
                      .-.|.++++.......     +    .... .  .+++- ...+..+++|+.          +|.|+-+|.++|+.+-.+
T Consensus       273 iALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       273 IALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            9999999876532110     0    0000 0  01111 113455666642          688999999999998776


Q ss_pred             cCC---------ccc--------E-EEEEeC--CCEEEEEe------------------CCCcEEEEECCCCeeeEEecC
Q psy9182         394 NGH---------KRG--------I-ACLQYR--DRLVVSGS------------------SDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       394 ~~~---------~~~--------v-~~~~~~--~~~l~~~~------------------~dg~v~iwd~~~~~~~~~~~~  435 (486)
                      ..-         .+.        + ..+++|  ..++..+.                  ..+.|.-.|.++|+....++.
T Consensus       353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~  432 (764)
T TIGR03074       353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT  432 (764)
T ss_pred             ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence            521         000        0 112222  12222211                  235677788999999887764


Q ss_pred             -cc---------cC-eEEEEe-cCC---EEEEEeCCCcEEEEeCCCCC
Q psy9182         436 -HE---------EL-VRCIRF-DAK---RIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       436 -h~---------~~-v~~~~~-~~~---~l~s~~~dg~v~iwdl~~~~  468 (486)
                       |.         .+ +..+.. +|+   .++.++.+|.+.+.|-++++
T Consensus       433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~  480 (764)
T TIGR03074       433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGE  480 (764)
T ss_pred             cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCC
Confidence             21         11 223433 553   68999999999999988875

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG1008|consensus

Probab=96.58  E-value=0.0006  Score=64.96  Aligned_cols=179  Identities=19%  Similarity=0.306  Sum_probs=108.9

Q ss_pred             CCEEEEEecCCeEEEEECCCcee--eEEEcCCcccEEEEEe---cCCEEEEEe----CCCcEEEEECCCC--cEEEE--e
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQC--IKVLTGHTGSVLCLQY---DERVIISGS----SDSTVRVWDVNTG--EMVNT--L  310 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~---~~~~l~~~~----~dg~i~vwd~~~~--~~~~~--~  310 (486)
                      ...+++|..+|.|.+-..+....  .....++....++++|   |.+.|++|-    .|-.+.|||+.++  .+...  +
T Consensus        70 ~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~f  149 (783)
T KOG1008|consen   70 RCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLF  149 (783)
T ss_pred             hhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccc
Confidence            45688999999999987665332  2344567778899999   557777773    3567999999876  22221  2


Q ss_pred             cc-cCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeec-CcccEEEEEeCCCEEEEEeCCCcEEEEE-CC
Q psy9182         311 IH-HCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVG-HRAAVNVVDFDEKYIVSASGDRTIKVWN-TS  385 (486)
Q Consensus       311 ~~-~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~iwd-~~  385 (486)
                      .. ......+++|..  .++++|.....++++|++......  ..... ....++.-.|.++|+++-. ||.|.+|| .+
T Consensus       150 s~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~--~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~r  226 (783)
T KOG1008|consen  150 SSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV--SSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYR  226 (783)
T ss_pred             ccccccCccccccccCcchhhcccccchhhhhhhhhhhhhh--hhhhhhhcccceecCCCCCceeccc-cCceeeccchh
Confidence            11 223344666653  378888889999999998432111  11111 0111222223778888776 89999999 43


Q ss_pred             Cce-EEEEEcCCc----ccEEEEEeC---CCEEEEEeC-CCcEEEEECC
Q psy9182         386 SCE-FVRTLNGHK----RGIACLQYR---DRLVVSGSS-DNTIRLWDIE  425 (486)
Q Consensus       386 ~~~-~~~~~~~~~----~~v~~~~~~---~~~l~~~~~-dg~v~iwd~~  425 (486)
                      +-+ ++..+....    ..+..++|.   ...+++... .++|+.+|+.
T Consensus       227 nienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  227 NIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             hhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            322 222222112    237777774   345555554 5789999984

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=96.53  E-value=0.67  Score=43.00  Aligned_cols=136  Identities=12%  Similarity=0.133  Sum_probs=68.0

Q ss_pred             EEEecCCEEEEEeCC-----CcEEEEECCCCcEE---EEecccC---ccEEEEEEcCCeEEEEeC-----CCcEEEEECC
Q psy9182         279 CLQYDERVIISGSSD-----STVRVWDVNTGEMV---NTLIHHC---EAVLHLRFSNGMMVTCSK-----DRSIAVWDMV  342 (486)
Q Consensus       279 ~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~---~~~~~~~---~~i~~~~~~~~~l~~~~~-----dg~i~i~d~~  342 (486)
                      ++..++.+++.|+.+     ..+..+|+.+.+..   ..+..-.   .........+...+.|+.     ...+..||+.
T Consensus        68 ~~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~  147 (323)
T TIGR03548        68 SVSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLE  147 (323)
T ss_pred             EEEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCC
Confidence            344577777777764     35677787766531   2221111   112222333445555553     2468888987


Q ss_pred             CCCceeeEEeeec-CcccEEEEEeCCCEEEEEeCCC----cEEEEECCCceEEEEEcC----C-c---ccEEEEEe-CCC
Q psy9182         343 SPNEITLRRVLVG-HRAAVNVVDFDEKYIVSASGDR----TIKVWNTSSCEFVRTLNG----H-K---RGIACLQY-RDR  408 (486)
Q Consensus       343 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~----~-~---~~v~~~~~-~~~  408 (486)
                      +.+-.. ...+.. ......++..+++..+.|+.++    .+..||..+.+-.. +..    . .   .....+.. ++.
T Consensus       148 ~~~W~~-~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~p~~~~~~~~~~~~~~~  225 (323)
T TIGR03548       148 TQEWFE-LPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQK-VADPTTDSEPISLLGAASIKINESL  225 (323)
T ss_pred             CCCeeE-CCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEE-CCCCCCCCCceeccceeEEEECCCE
Confidence            654221 111111 1222233445777777777653    35688888754322 111    0 0   01222333 467


Q ss_pred             EEEEEeCC
Q psy9182         409 LVVSGSSD  416 (486)
Q Consensus       409 ~l~~~~~d  416 (486)
                      +++.|+.+
T Consensus       226 iyv~GG~~  233 (323)
T TIGR03548       226 LLCIGGFN  233 (323)
T ss_pred             EEEECCcC
Confidence            78888765

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>KOG3617|consensus

Probab=96.48  E-value=0.08  Score=52.86  Aligned_cols=108  Identities=14%  Similarity=0.157  Sum_probs=79.3

Q ss_pred             CccceEEEEeCCCEEEEEe----cCCeEEEEECCCceeeEEEcCCcccEEEEEecC--CEEEEEeCCCcEEEEECCCCcE
Q psy9182         233 NSKGVYCLQYDDHKIVSGL----RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTGEM  306 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~  306 (486)
                      ....+.+++|...++++++    ..|.|.|| .++|++..... .+-.+++++|..  -.|+.|-.-|.+.+|...+.+.
T Consensus        16 avsti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~   93 (1416)
T KOG3617|consen   16 AVSTISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTET   93 (1416)
T ss_pred             ccccccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCcee
Confidence            4456677788888888775    45789998 46666543332 122245677854  4566777779999999887776


Q ss_pred             EEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECC
Q psy9182         307 VNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~  342 (486)
                      -.....|..+|..+.|++  +.++++..-|.|.+|...
T Consensus        94 htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   94 HTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            666678899999999985  489999999999999875

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.45  E-value=0.56  Score=41.12  Aligned_cols=172  Identities=16%  Similarity=0.197  Sum_probs=106.2

Q ss_pred             EEEEe--cCCEEEEEeCCC--cEEEEECCCCcEEEEecccC-ccEEEEEEcCCeEEE-EeCCCcEEEEECCCCCceeeEE
Q psy9182         278 LCLQY--DERVIISGSSDS--TVRVWDVNTGEMVNTLIHHC-EAVLHLRFSNGMMVT-CSKDRSIAVWDMVSPNEITLRR  351 (486)
Q Consensus       278 ~~~~~--~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~  351 (486)
                      ..+.+  ++.++-+.+.-|  .|+.+|+.+++......... ----.+...++.++. .=.++...+||..+-+......
T Consensus        48 QGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~  127 (264)
T PF05096_consen   48 QGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFP  127 (264)
T ss_dssp             EEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred             ccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEe
Confidence            45666  455556666555  69999999998876654322 222345555664444 4467889999998766554332


Q ss_pred             eeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--c---cEEEEEe-CCCEEEEEeCCCcEEEEECC
Q psy9182         352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--R---GIACLQY-RDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       352 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l~~~~~dg~v~iwd~~  425 (486)
                      .    ...-..++.++..|+.+.....|+.+|..+.+....+....  .   .++-+.+ +|.+.|=.=....|...|..
T Consensus       128 y----~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I~~Idp~  203 (264)
T PF05096_consen  128 Y----PGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRIVRIDPE  203 (264)
T ss_dssp             -----SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEEEEEETT
T ss_pred             c----CCcceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeEEEEeCC
Confidence            1    23455666888888888888899999999988877766332  2   3455555 45555555567788889999


Q ss_pred             CCeeeEEecC------------c---ccCeEEEEe--cCCE-EEEE
Q psy9182         426 CGACLRVLEG------------H---EELVRCIRF--DAKR-IVSG  453 (486)
Q Consensus       426 ~~~~~~~~~~------------h---~~~v~~~~~--~~~~-l~s~  453 (486)
                      +|+.+..+.-            +   .+..+.|++  ..+. ++||
T Consensus       204 tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  204 TGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             T-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             CCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            9998877631            1   245789999  3444 4444

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.45  E-value=0.57  Score=41.20  Aligned_cols=229  Identities=12%  Similarity=0.093  Sum_probs=137.4

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCce---eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcE---EE
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ---CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEM---VN  308 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~  308 (486)
                      .-..++.-.|++..++..+.-+.+.|+.+..   ...........-..++..|++-..+..|+-+.+.|+.....   +.
T Consensus       129 gyaygv~vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~  208 (370)
T COG5276         129 GYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIG  208 (370)
T ss_pred             ceEEEEEecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEE
Confidence            4456777789999998877778888876543   23333334444466777899999999999999999976532   22


Q ss_pred             EecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeec-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCc
Q psy9182         309 TLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG-HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       309 ~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                      ... ....+.++..+++.....-.+-.+.+-|....+.......... ....++.+...+++......+.-+.+-|..+.
T Consensus       209 ~~n-~g~g~~sv~vsdnr~y~vvy~egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp  287 (370)
T COG5276         209 SYN-TGPGTYSVSVSDNRAYLVVYDEGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNP  287 (370)
T ss_pred             EEe-cCCceEEEEecCCeeEEEEcccceEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCC
Confidence            222 2336888888988777777777788888887765544333222 12233334557888888777777777776653


Q ss_pred             eE---EEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe--EEEEecCCEEEEEeCCCcEEEE
Q psy9182         388 EF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV--RCIRFDAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       388 ~~---~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~l~s~~~dg~v~iw  462 (486)
                      .-   ...+......-..+...+.++..+..+ ...+-+....+......+....+  .++..+.+.+.+...++.+.+|
T Consensus       288 ~spfl~ss~~t~g~~a~gi~ay~~y~yiadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~  366 (370)
T COG5276         288 PSPFLSSSLDTAGYQAAGIRAYGNYNYIADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSII  366 (370)
T ss_pred             CCCchhccccCCCccccceEEecCeeEeccCC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEE
Confidence            21   112222222333444445555544433 33344443222222222211112  2344466788889999999999


Q ss_pred             eCC
Q psy9182         463 NLV  465 (486)
Q Consensus       463 dl~  465 (486)
                      +..
T Consensus       367 ~~~  369 (370)
T COG5276         367 EYL  369 (370)
T ss_pred             Eec
Confidence            853

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.37  E-value=0.63  Score=40.92  Aligned_cols=193  Identities=11%  Similarity=0.074  Sum_probs=130.6

Q ss_pred             ccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec--ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEe
Q psy9182         275 GSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       275 ~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  352 (486)
                      +.+..+.+.++++..+..+.-+++.|+.+......+.  ...+-..++..++++..++..+.-+.++|+.++....+...
T Consensus        87 ~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP~lagr  166 (370)
T COG5276          87 DLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGR  166 (370)
T ss_pred             hhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCceeeee
Confidence            4456677788899999888889999998765433331  12255677888999999999777888999998887665555


Q ss_pred             eecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceE---EEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCee
Q psy9182         353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       353 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      .......-..+...|++...+..|+-+.+-|+.+...   +.... ....+..+...+++....-.+--+.+-|....+.
T Consensus       167 ya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-~g~g~~sv~vsdnr~y~vvy~egvlivd~s~~ss  245 (370)
T COG5276         167 YALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-TGPGTYSVSVSDNRAYLVVYDEGVLIVDVSGPSS  245 (370)
T ss_pred             eccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-cCCceEEEEecCCeeEEEEcccceEEEecCCCCC
Confidence            5554555567777999999999999999999876432   22222 2236777777766655555555677777765553


Q ss_pred             eEEecCc-c---cCeEEEEecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         430 LRVLEGH-E---ELVRCIRFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       430 ~~~~~~h-~---~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ...+... .   ..++.+...+++...+..+.-+.+-|+....
T Consensus       246 p~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~  288 (370)
T COG5276         246 PTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPP  288 (370)
T ss_pred             ceEeeccccCCcccccceecccceeeeeccccCceeEeccCCC
Confidence            3333211 1   1233345577777777777777777776543

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=96.12  E-value=0.86  Score=39.99  Aligned_cols=170  Identities=14%  Similarity=0.081  Sum_probs=109.6

Q ss_pred             eCCCEEEEEecCC--eEEEEECCCceeeEEEcCCccc-EEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         242 YDDHKIVSGLRDN--TIKVWDRVSLQCIKVLTGHTGS-VLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       242 ~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~-v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      .++.++-+.+.-|  .|+.+|+.+++......-.... --.+.. +++.....=.++...+||..+.+.+.++.-. ..=
T Consensus        54 ~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~-~EG  132 (264)
T PF05096_consen   54 DDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFPYP-GEG  132 (264)
T ss_dssp             ETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE-S-SS-
T ss_pred             CCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEecC-Ccc
Confidence            4566667777666  7999999999887665533221 133444 4444444556899999999999998888543 455


Q ss_pred             EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcc---cEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA---AVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      ..++..+..++.......++++|..+-+......... ...   .++-+.+ +|...|-.-....|...|..+|+.+..+
T Consensus       133 WGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~-~g~pv~~LNELE~i~G~IyANVW~td~I~~Idp~tG~V~~~i  211 (264)
T PF05096_consen  133 WGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTD-NGRPVSNLNELEYINGKIYANVWQTDRIVRIDPETGKVVGWI  211 (264)
T ss_dssp             -EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EE-TTEE---EEEEEEETTEEEEEETTSSEEEEEETTT-BEEEEE
T ss_pred             eEEEcCCCEEEEECCccceEEECCcccceEEEEEEEE-CCEECCCcEeEEEEcCEEEEEeCCCCeEEEEeCCCCeEEEEE
Confidence            6677777888888888999999988766554433322 222   3455666 7777776777788999999999988876


Q ss_pred             cC------------C---cccEEEEEeC---CCEEEEE
Q psy9182         394 NG------------H---KRGIACLQYR---DRLVVSG  413 (486)
Q Consensus       394 ~~------------~---~~~v~~~~~~---~~~l~~~  413 (486)
                      ..            +   ..-.+.++++   +++++||
T Consensus       212 Dls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  212 DLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             E-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             EhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence            31            1   2346788884   4556665

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.11  E-value=1.4  Score=42.48  Aligned_cols=176  Identities=15%  Similarity=0.179  Sum_probs=87.1

Q ss_pred             eEEEEECCCceee--EEEcCCccc--EEEEEe--cCCEEEEEeCC----CcEEEEECCCC----cEEEEecc-cCccEEE
Q psy9182         255 TIKVWDRVSLQCI--KVLTGHTGS--VLCLQY--DERVIISGSSD----STVRVWDVNTG----EMVNTLIH-HCEAVLH  319 (486)
Q Consensus       255 ~i~i~d~~~~~~~--~~~~~~~~~--v~~~~~--~~~~l~~~~~d----g~i~vwd~~~~----~~~~~~~~-~~~~i~~  319 (486)
                      .|+.|.+.+....  ..+......  ...+..  |+++++.....    ..+.+.|+..+    .....+.. ..+....
T Consensus       203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~  282 (414)
T PF02897_consen  203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYY  282 (414)
T ss_dssp             EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEE
T ss_pred             EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEE
Confidence            4566665554321  333332222  233333  77776654332    34788888764    22333333 3333444


Q ss_pred             EEEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecCcc--cEEEEEeCCCEEEEE-eCCC--cEEEEECCCceEE
Q psy9182         320 LRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRA--AVNVVDFDEKYIVSA-SGDR--TIKVWNTSSCEFV  390 (486)
Q Consensus       320 ~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~-~~d~--~i~iwd~~~~~~~  390 (486)
                      +...++.++.-+.    ++.|...++...........+..+..  .+..+...+++|+.. ..++  .|+++|+..+...
T Consensus       283 v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~  362 (414)
T PF02897_consen  283 VDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKES  362 (414)
T ss_dssp             EEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEE
T ss_pred             EEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEE
Confidence            5555664444332    46777788877764222223334433  566676655555544 4443  5889999834444


Q ss_pred             EEEcC-CcccEEEEEe--CC-CEEEEEeC---CCcEEEEECCCCeee
Q psy9182         391 RTLNG-HKRGIACLQY--RD-RLVVSGSS---DNTIRLWDIECGACL  430 (486)
Q Consensus       391 ~~~~~-~~~~v~~~~~--~~-~~l~~~~~---dg~v~iwd~~~~~~~  430 (486)
                      ..+.. ..+.+..+..  ++ .+.+.-+.   -+++..||+.+++..
T Consensus       363 ~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~  409 (414)
T PF02897_consen  363 REIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT  409 (414)
T ss_dssp             EEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred             eeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence            44443 3344555553  23 33333332   367888888887653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG2395|consensus

Probab=95.94  E-value=0.14  Score=48.43  Aligned_cols=134  Identities=16%  Similarity=0.190  Sum_probs=86.3

Q ss_pred             EEEEecCCeEEEEECCCceeeEEEcCCcc-cEEEEEec-------CCEEEEEeCCCcEEEEECCCCcE--EEEeccc---
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQYD-------ERVIISGSSDSTVRVWDVNTGEM--VNTLIHH---  313 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~-------~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~---  313 (486)
                      +..+.....++-.|++.|+.+..++-+.. .+..+..+       ...-+.|-.|..|.-||.+-...  +...+.|   
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~  428 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYS  428 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccc
Confidence            44555666788899999999999987776 33333322       22345577788899999873221  1111221   


Q ss_pred             -CccEEEEEE-cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         314 -CEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       314 -~~~i~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                       .....|++- ..+++++|+.+|.|++||- .+...  ...+++-..+|..+..  +|++++..+. .++.+-++
T Consensus       429 ~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~A--KTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~t  499 (644)
T KOG2395|consen  429 TKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRA--KTALPGLGDAIKHVDVTADGKWILATCK-TYLLLIDT  499 (644)
T ss_pred             cccccceeeecCCceEEEeecCCcEEeehh-hhhhh--hhcccccCCceeeEEeeccCcEEEEecc-cEEEEEEE
Confidence             222344444 3569999999999999996 33222  2456677777877766  8888877654 56666664

>KOG3617|consensus

Probab=95.93  E-value=0.081  Score=52.83  Aligned_cols=71  Identities=15%  Similarity=0.165  Sum_probs=61.6

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcce
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTIL  186 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~  186 (486)
                      .++++++|..-.|+.|-.-|.+.+|...+.+.-.....|..+|..+.|+               ++|..++++..-|.+.
T Consensus        62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS---------------~~G~~l~t~d~~g~v~  126 (1416)
T KOG3617|consen   62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWS---------------HDGTVLMTLDNPGSVH  126 (1416)
T ss_pred             hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEec---------------CCCCeEEEcCCCceeE
Confidence            3557888888899999999999999998877666677899999999998               6888899999999999


Q ss_pred             eeeccc
Q psy9182         187 IWDFLN  192 (486)
Q Consensus       187 vWd~~~  192 (486)
                      +|.++.
T Consensus       127 lwr~d~  132 (1416)
T KOG3617|consen  127 LWRYDV  132 (1416)
T ss_pred             EEEeee
Confidence            999854

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.83  E-value=1.9  Score=41.62  Aligned_cols=229  Identities=10%  Similarity=0.083  Sum_probs=118.2

Q ss_pred             eEEEEeCCCEEEEE-ecCC----eEEEEECCCceeeEEE-cCCcccEEEEEe--cCCEEEEEeCCC-----------cEE
Q psy9182         237 VYCLQYDDHKIVSG-LRDN----TIKVWDRVSLQCIKVL-TGHTGSVLCLQY--DERVIISGSSDS-----------TVR  297 (486)
Q Consensus       237 v~~~~~~~~~l~~~-~~dg----~i~i~d~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg-----------~i~  297 (486)
                      ..+++|++++++.+ +..|    .++++|+.+++.+... ...  ....+.|  +++.++....+.           .|+
T Consensus       128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~  205 (414)
T PF02897_consen  128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY  205 (414)
T ss_dssp             EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred             eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence            35677899988866 3344    5999999999876532 211  1123777  556655554332           378


Q ss_pred             EEECCCCcE--EEEecccCcc--EEEEEEcCC--eEEE-EeCC---CcEEEEECCCC--CceeeEEeeecCcccEEEEEe
Q psy9182         298 VWDVNTGEM--VNTLIHHCEA--VLHLRFSNG--MMVT-CSKD---RSIAVWDMVSP--NEITLRRVLVGHRAAVNVVDF  365 (486)
Q Consensus       298 vwd~~~~~~--~~~~~~~~~~--i~~~~~~~~--~l~~-~~~d---g~i~i~d~~~~--~~~~~~~~~~~~~~~v~~~~~  365 (486)
                      .|.+.+...  ...+......  ...+..+++  +++. ....   ..+.+.|+..+  ..................+..
T Consensus       206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~  285 (414)
T PF02897_consen  206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDH  285 (414)
T ss_dssp             EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEE
T ss_pred             EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEc
Confidence            888876642  2333332222  456666643  4433 3322   35788888764  111222223333344444444


Q ss_pred             CCC-EEEEEe---CCCcEEEEECCCceE---EEEEcCCcc--cEEEEEeCCCEEEE-EeCCC--cEEEEECCCCeeeEEe
Q psy9182         366 DEK-YIVSAS---GDRTIKVWNTSSCEF---VRTLNGHKR--GIACLQYRDRLVVS-GSSDN--TIRLWDIECGACLRVL  433 (486)
Q Consensus       366 ~~~-~l~~~~---~d~~i~iwd~~~~~~---~~~~~~~~~--~v~~~~~~~~~l~~-~~~dg--~v~iwd~~~~~~~~~~  433 (486)
                      .+. +++...   ..+.|...++.+...   ...+-.+..  .+..+...+++|+. .-.++  .|+++++..+.....+
T Consensus       286 ~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~  365 (414)
T PF02897_consen  286 HGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESREI  365 (414)
T ss_dssp             ETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEEE
T ss_pred             cCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEeee
Confidence            344 444332   245677778777652   224444544  45666665555544 44444  4889999844444444


Q ss_pred             cC-cccCeEEEEe--cCC-EEEEEeC---CCcEEEEeCCCC
Q psy9182         434 EG-HEELVRCIRF--DAK-RIVSGAY---DGKIKVWNLVAA  467 (486)
Q Consensus       434 ~~-h~~~v~~~~~--~~~-~l~s~~~---dg~v~iwdl~~~  467 (486)
                      .. -.+.|..+..  +++ ..++.+.   -+++..||+.++
T Consensus       366 ~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~  406 (414)
T PF02897_consen  366 PLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATG  406 (414)
T ss_dssp             ESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTT
T ss_pred             cCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence            33 3344566654  333 3333332   356778887765

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=95.81  E-value=1.5  Score=40.10  Aligned_cols=202  Identities=14%  Similarity=0.072  Sum_probs=106.0

Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccC-----ccEEE
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-----EAVLH  319 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----~~i~~  319 (486)
                      ++.+--..+.|.-|+..+++.. .+. +.+.+.++.. +..-.+.++..| +.+++.+++..+..+....     .....
T Consensus        39 L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~~g-~~~~~~~~~~~~t~~~~~~~~~~~~r~ND  115 (307)
T COG3386          39 LLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACEHG-VRLLDPDTGGKITLLAEPEDGLPLNRPND  115 (307)
T ss_pred             EEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEccc-cEEEeccCCceeEEeccccCCCCcCCCCc
Confidence            4555566778888887765432 222 2233344333 433333334444 6777876666543332211     12233


Q ss_pred             EEEcC-CeEEEEeCC------------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CCcEEEEE
Q psy9182         320 LRFSN-GMMVTCSKD------------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DRTIKVWN  383 (486)
Q Consensus       320 ~~~~~-~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~i~iwd  383 (486)
                      ....+ +.++.++..            |.|+.+|. .+...   +....+-..-+.++|  |++.++.+.. .+.|.-|+
T Consensus       116 ~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~---~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~  191 (307)
T COG3386         116 GVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVV---RLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYD  191 (307)
T ss_pred             eeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEE---EeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEe
Confidence            33332 344444433            23444443 22222   222233333445555  7877666654 47788887


Q ss_pred             CCC--c----eE-EEEEcCCcccE--EEEEeCCCEEEEEeCCC-cEEEEECCCCeeeEEecCcccCeEEEEe---cCCEE
Q psy9182         384 TSS--C----EF-VRTLNGHKRGI--ACLQYRDRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIRF---DAKRI  450 (486)
Q Consensus       384 ~~~--~----~~-~~~~~~~~~~v--~~~~~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l  450 (486)
                      +..  +    +. ...+....+..  .++.-+|.+-+++..+| .|.+|+.. |+++..+.-....+++++|   +.+.|
T Consensus       192 ~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L  270 (307)
T COG3386         192 LDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTL  270 (307)
T ss_pred             cCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEE
Confidence            652  1    11 11111222222  34444577665555554 99999998 9999999888788999999   33555


Q ss_pred             EEEeC
Q psy9182         451 VSGAY  455 (486)
Q Consensus       451 ~s~~~  455 (486)
                      ...+.
T Consensus       271 ~iTs~  275 (307)
T COG3386         271 YITSA  275 (307)
T ss_pred             EEEec
Confidence            44443

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=95.74  E-value=1.9  Score=40.97  Aligned_cols=66  Identities=14%  Similarity=0.083  Sum_probs=34.3

Q ss_pred             EeCCCEEEEEec-CCeEEEEECCCc----eeeEEEcC-CcccEEEEEecCCEEEEEeCC-----------CcEEEEECCC
Q psy9182         241 QYDDHKIVSGLR-DNTIKVWDRVSL----QCIKVLTG-HTGSVLCLQYDERVIISGSSD-----------STVRVWDVNT  303 (486)
Q Consensus       241 ~~~~~~l~~~~~-dg~i~i~d~~~~----~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d-----------g~i~vwd~~~  303 (486)
                      ..+++..+.|+. +..+.++|+...    ..+..+.. .......+..++.+.+.|+.+           ..+..||..+
T Consensus        36 ~~~~~iyv~gG~~~~~~~~~d~~~~~~~W~~l~~~p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~  115 (376)
T PRK14131         36 IDNNTVYVGLGSAGTSWYKLDLNAPSKGWTKIAAFPGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKT  115 (376)
T ss_pred             EECCEEEEEeCCCCCeEEEEECCCCCCCeEECCcCCCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCC
Confidence            345665555544 445777887532    11222211 111222344477777777653           2477889877


Q ss_pred             CcE
Q psy9182         304 GEM  306 (486)
Q Consensus       304 ~~~  306 (486)
                      .+.
T Consensus       116 n~W  118 (376)
T PRK14131        116 NSW  118 (376)
T ss_pred             CEE
Confidence            654

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=95.44  E-value=2.3  Score=39.88  Aligned_cols=215  Identities=11%  Similarity=0.070  Sum_probs=102.1

Q ss_pred             eCCCEEEEEecC-CeEEEEECCCc----eeeEEEcC-CcccEEEEEecCCEEEEEeCC-----------CcEEEEECCCC
Q psy9182         242 YDDHKIVSGLRD-NTIKVWDRVSL----QCIKVLTG-HTGSVLCLQYDERVIISGSSD-----------STVRVWDVNTG  304 (486)
Q Consensus       242 ~~~~~l~~~~~d-g~i~i~d~~~~----~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d-----------g~i~vwd~~~~  304 (486)
                      .+++..++|+.. ..+..+|+...    ..+..+.. ..........+++..+.|+.+           ..+..||..+.
T Consensus        16 ~~~~vyv~GG~~~~~~~~~d~~~~~~~W~~l~~~p~~~R~~~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~   95 (346)
T TIGR03547        16 IGDKVYVGLGSAGTSWYKLDLKKPSKGWQKIADFPGGPRNQAVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKN   95 (346)
T ss_pred             ECCEEEEEccccCCeeEEEECCCCCCCceECCCCCCCCcccceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCC
Confidence            355555555543 45777776321    22222221 111223344477777777753           24778898776


Q ss_pred             cEEEEecccCc---cEEEE-EEcCCeEEEEeCC---------------------------------------CcEEEEEC
Q psy9182         305 EMVNTLIHHCE---AVLHL-RFSNGMMVTCSKD---------------------------------------RSIAVWDM  341 (486)
Q Consensus       305 ~~~~~~~~~~~---~i~~~-~~~~~~l~~~~~d---------------------------------------g~i~i~d~  341 (486)
                      +-...-.....   ....+ ...+...+.|+.+                                       ..+.+||.
T Consensus        96 ~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp  175 (346)
T TIGR03547        96 SWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDP  175 (346)
T ss_pred             EEecCCCCCCCcccceeEEEEeCCEEEEEcCcChHHHHHHHhhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEEC
Confidence            54332111111   12222 2344466666653                                       46888998


Q ss_pred             CCCCceeeEEeeec-CcccEEEEEeCCCEEEEEeCCC------cEEEEECCC----ceEEEEEcC-----Ccc--cEEEE
Q psy9182         342 VSPNEITLRRVLVG-HRAAVNVVDFDEKYIVSASGDR------TIKVWNTSS----CEFVRTLNG-----HKR--GIACL  403 (486)
Q Consensus       342 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~------~i~iwd~~~----~~~~~~~~~-----~~~--~v~~~  403 (486)
                      .+.+-.. ...+.. .......+..++++.+.|+.+.      .+..+++..    ...+..+..     +..  .....
T Consensus       176 ~t~~W~~-~~~~p~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y~~~~~~~~W~~~~~m~~~r~~~~~~~~~~~a~  254 (346)
T TIGR03547       176 STNQWRN-LGENPFLGTAGSAIVHKGNKLLLINGEIKPGLRTAEVKQYLFTGGKLEWNKLPPLPPPKSSSQEGLAGAFAG  254 (346)
T ss_pred             CCCceeE-CccCCCCcCCCceEEEECCEEEEEeeeeCCCccchheEEEEecCCCceeeecCCCCCCCCCccccccEEeee
Confidence            7654221 111111 1122233445777777776531      244555432    222222211     111  12234


Q ss_pred             EeCCCEEEEEeCC----------------------CcEEEEECCCCe--eeEEecCcccCeEEEEecCCEEEEEeCCC
Q psy9182         404 QYRDRLVVSGSSD----------------------NTIRLWDIECGA--CLRVLEGHEELVRCIRFDAKRIVSGAYDG  457 (486)
Q Consensus       404 ~~~~~~l~~~~~d----------------------g~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~~~dg  457 (486)
                      ..++++.+.|+.+                      ..+.+||.++.+  .+..+........++..+++.++.|+.+.
T Consensus       255 ~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~~~~~~~~~~~~~~iyv~GG~~~  332 (346)
T TIGR03547       255 ISNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEVYALDNGKWSKVGKLPQGLAYGVSVSWNNGVLLIGGENS  332 (346)
T ss_pred             EECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeEEEecCCcccccCCCCCCceeeEEEEcCCEEEEEeccCC
Confidence            5678888888753                      146788876542  22222111111223344888888887653

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>KOG4640|consensus

Probab=95.36  E-value=0.086  Score=50.87  Aligned_cols=70  Identities=16%  Similarity=0.253  Sum_probs=51.5

Q ss_pred             cEEEEEeCC--CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE-EEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         399 GIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       399 ~v~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      .+.-+.|++  .++|.+..+|.|.+..+. .+.+.++.-|...++ +++|  ||+.|+.|-.||+|++-|+.++..
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            344555653  567888888888888777 777777776666666 8888  888888888888888888877653

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.34  E-value=2.7  Score=40.00  Aligned_cols=72  Identities=13%  Similarity=0.222  Sum_probs=47.0

Q ss_pred             EeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE-Ee---CCC-----------------EEEEEeCCCcEEEE
Q psy9182         364 DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL-QY---RDR-----------------LVVSGSSDNTIRLW  422 (486)
Q Consensus       364 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~-~~---~~~-----------------~l~~~~~dg~v~iw  422 (486)
                      ++++++.++...=|.|.++|+.++..++.+++-...-... ..   ..+                 +++-+-.-|.|.||
T Consensus       316 sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyaprRg~lEvW  395 (415)
T PF14655_consen  316 SPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAPRRGILEVW  395 (415)
T ss_pred             CCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEeccCCeEEEE
Confidence            3367777887777899999998888888777655432211 11   111                 23334557888888


Q ss_pred             ECCCCeeeEEecC
Q psy9182         423 DIECGACLRVLEG  435 (486)
Q Consensus       423 d~~~~~~~~~~~~  435 (486)
                      ++++|..+..+..
T Consensus       396 ~~~~g~Rv~a~~v  408 (415)
T PF14655_consen  396 SMRQGPRVAAFNV  408 (415)
T ss_pred             ecCCCCEEEEEEe
Confidence            8888887776653

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=95.17  E-value=2.1  Score=37.71  Aligned_cols=197  Identities=11%  Similarity=0.092  Sum_probs=99.9

Q ss_pred             ccccccccCCccC-cceEEEeecCceeeecccccccceeeecCc-ccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         103 LQRDFISLLPNFD-EKYIVSASGDRTIKVWNTSSCEFVRTLNGH-KRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       103 ~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h-~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ....+..+.++|+ +.++++....+.|...+. +|+.++.+.-. .+....+++.               .++.++++.-
T Consensus        20 ~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~---------------g~~~~vl~~E   83 (248)
T PF06977_consen   20 ILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYL---------------GNGRYVLSEE   83 (248)
T ss_dssp             --S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE----------------STTEEEEEET
T ss_pred             ccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEE---------------CCCEEEEEEc
Confidence            3445788899987 456677788888888886 47887776432 2345566664               2344455555


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEe--cc--CCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRIN--CR--SENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                      .++.+.+.++.......                      .......+.  ..  ......-+|+.+.++.|+++-...-.
T Consensus        84 r~~~L~~~~~~~~~~~~----------------------~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~  141 (248)
T PF06977_consen   84 RDQRLYIFTIDDDTTSL----------------------DRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPK  141 (248)
T ss_dssp             TTTEEEEEEE----TT------------------------EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSE
T ss_pred             CCCcEEEEEEecccccc----------------------chhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCCh
Confidence            57777777764321110                      000011111  11  12334567777777888888777666


Q ss_pred             EEEECCC---ceeeEEE--c------CCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccC--------
Q psy9182         257 KVWDRVS---LQCIKVL--T------GHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC--------  314 (486)
Q Consensus       257 ~i~d~~~---~~~~~~~--~------~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------  314 (486)
                      .+|.+..   ...+...  .      .....+.++++   .+++++....+..|..+| .+|+.+..+.-..        
T Consensus       142 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~  220 (248)
T PF06977_consen  142 RLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKD  220 (248)
T ss_dssp             EEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS-
T ss_pred             hhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccc
Confidence            6776543   1111111  1      12233566776   456788888889999999 5687766553322        


Q ss_pred             -ccEEEEEEcCC-eEEEEeCCCcEEE
Q psy9182         315 -EAVLHLRFSNG-MMVTCSKDRSIAV  338 (486)
Q Consensus       315 -~~i~~~~~~~~-~l~~~~~dg~i~i  338 (486)
                       ...-.+++.++ .|++.+.-+..++
T Consensus       221 ~~QpEGIa~d~~G~LYIvsEpNlfy~  246 (248)
T PF06977_consen  221 IPQPEGIAFDPDGNLYIVSEPNLFYR  246 (248)
T ss_dssp             --SEEEEEE-TT--EEEEETTTEEEE
T ss_pred             cCCccEEEECCCCCEEEEcCCceEEE
Confidence             23556677643 5555555554443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PLN02153 epithiospecifier protein

Probab=95.12  E-value=2.9  Score=39.15  Aligned_cols=186  Identities=13%  Similarity=0.071  Sum_probs=94.8

Q ss_pred             eCCCEEEEEecC-------CeEEEEECCCceeeEEEc--C-Ccc---cEEEEEecCCEEEEEeCC-----CcEEEEECCC
Q psy9182         242 YDDHKIVSGLRD-------NTIKVWDRVSLQCIKVLT--G-HTG---SVLCLQYDERVIISGSSD-----STVRVWDVNT  303 (486)
Q Consensus       242 ~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~--~-~~~---~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~  303 (486)
                      .++..++.|+.+       ..+.+||..+.+-...-.  . ...   ...++..++++++.|+.+     ..+.+||..+
T Consensus        31 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t  110 (341)
T PLN02153         31 VGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVK  110 (341)
T ss_pred             ECCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCC
Confidence            456666777653       357888887754222111  0 010   123345577777777753     3578899887


Q ss_pred             CcEEE--Eecc---cCcc-EEEEEEcC-CeEEEEeCC-----------CcEEEEECCCCCceeeEEeee---cCcccEEE
Q psy9182         304 GEMVN--TLIH---HCEA-VLHLRFSN-GMMVTCSKD-----------RSIAVWDMVSPNEITLRRVLV---GHRAAVNV  362 (486)
Q Consensus       304 ~~~~~--~~~~---~~~~-i~~~~~~~-~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~~---~~~~~v~~  362 (486)
                      .+-..  .+..   .... -.+++..+ ..++.|+.+           ..+.+||..+.+-... ....   ........
T Consensus       111 ~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l-~~~~~~~~~r~~~~~  189 (341)
T PLN02153        111 NEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQL-PDPGENFEKRGGAGF  189 (341)
T ss_pred             CEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeC-CCCCCCCCCCCcceE
Confidence            65432  1110   1111 12223333 455566643           2477888876532111 1000   11222233


Q ss_pred             EEeCCCEEEEEeCC-------------CcEEEEECCCceEEEEE-----cCCcccEEEEEeCCCEEEEEeCC--------
Q psy9182         363 VDFDEKYIVSASGD-------------RTIKVWNTSSCEFVRTL-----NGHKRGIACLQYRDRLVVSGSSD--------  416 (486)
Q Consensus       363 ~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~~d--------  416 (486)
                      ..++++.++.++.+             ..+.+||+.+.+-...-     ........++.+++.+++.|+..        
T Consensus       190 ~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~  269 (341)
T PLN02153        190 AVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHL  269 (341)
T ss_pred             EEECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCcccccc
Confidence            44577766665432             45888998876543221     11122334555677788887752        


Q ss_pred             ------CcEEEEECCCCe
Q psy9182         417 ------NTIRLWDIECGA  428 (486)
Q Consensus       417 ------g~v~iwd~~~~~  428 (486)
                            +.|..+|+.+.+
T Consensus       270 ~~~~~~n~v~~~d~~~~~  287 (341)
T PLN02153        270 GPGTLSNEGYALDTETLV  287 (341)
T ss_pred             ccccccccEEEEEcCccE
Confidence                  257788886543

>PLN02193 nitrile-specifier protein

Probab=95.02  E-value=4  Score=40.18  Aligned_cols=186  Identities=10%  Similarity=0.052  Sum_probs=95.7

Q ss_pred             EEecCCEEEEEeCC-------CcEEEEECCCCcEEEEecc---cCc----cEEEEEEcCCeEEEEeCC-----CcEEEEE
Q psy9182         280 LQYDERVIISGSSD-------STVRVWDVNTGEMVNTLIH---HCE----AVLHLRFSNGMMVTCSKD-----RSIAVWD  340 (486)
Q Consensus       280 ~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~---~~~----~i~~~~~~~~~l~~~~~d-----g~i~i~d  340 (486)
                      ...++.+++.|+.+       ..+.+||+++.+-.. +..   ...    ....+...+.+++.|+.+     ..+..||
T Consensus       172 ~~~~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~-~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD  250 (470)
T PLN02193        172 AQVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSI-SPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFD  250 (470)
T ss_pred             EEECCEEEEECCcCCCCCCeeCcEEEEECCCCEEEe-CCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEE
Confidence            34466666666643       247788988765432 111   001    112233344455666654     4588899


Q ss_pred             CCCCCceeeEEee---ecCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCceEEEEE-----cCCcccEEEEEeCC
Q psy9182         341 MVSPNEITLRRVL---VGHRAAVNVVDFDEKYIVSASGDR-----TIKVWNTSSCEFVRTL-----NGHKRGIACLQYRD  407 (486)
Q Consensus       341 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~  407 (486)
                      +.+.+-.. ....   ........+...++++.+.|+.++     .+..||+.+.+-...-     ............++
T Consensus       251 ~~t~~W~~-l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~~~g  329 (470)
T PLN02193        251 TTTNEWKL-LTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQG  329 (470)
T ss_pred             CCCCEEEE-cCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEEECC
Confidence            87653211 1111   111112223334667677776543     4678888775432211     01112223344577


Q ss_pred             CEEEEEeCC----CcEEEEECCCCeeeEEec-----CcccCeEEEEecCCEEEEEeCC--------------CcEEEEeC
Q psy9182         408 RLVVSGSSD----NTIRLWDIECGACLRVLE-----GHEELVRCIRFDAKRIVSGAYD--------------GKIKVWNL  464 (486)
Q Consensus       408 ~~l~~~~~d----g~v~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~l~s~~~d--------------g~v~iwdl  464 (486)
                      ++++.++.+    ..+.+||+.+.+-...-.     .......++.++++.++.|+.+              ..+.++|+
T Consensus       330 kiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~  409 (470)
T PLN02193        330 KVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDT  409 (470)
T ss_pred             cEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEc
Confidence            887777765    468999998754322211     0111223444577788888753              24677777


Q ss_pred             CCC
Q psy9182         465 VAA  467 (486)
Q Consensus       465 ~~~  467 (486)
                      .+.
T Consensus       410 ~t~  412 (470)
T PLN02193        410 ETL  412 (470)
T ss_pred             CcC
Confidence            654

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=94.99  E-value=3.1  Score=38.81  Aligned_cols=222  Identities=18%  Similarity=0.190  Sum_probs=96.8

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe----cCCEEEEEe----------------------
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY----DERVIISGS----------------------  291 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~----------------------  291 (486)
                      .+++++++.++-...+..|+-.|+.+.+....+......+-...+    |+..++-.-                      
T Consensus        86 ~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~  165 (386)
T PF14583_consen   86 GFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEAR  165 (386)
T ss_dssp             -EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC-
T ss_pred             eEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhC
Confidence            455677777665556678888999988766555544444422222    444433221                      


Q ss_pred             CCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeC---CC-cEEEEECCC--CCceeeEEeeecCcccEEE
Q psy9182         292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSK---DR-SIAVWDMVS--PNEITLRRVLVGHRAAVNV  362 (486)
Q Consensus       292 ~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~---dg-~i~i~d~~~--~~~~~~~~~~~~~~~~v~~  362 (486)
                      ....|.-.|+.+|+....+. ....+..+.|+|.   .+.-|-+   +. .-+||-+++  .........   ....+..
T Consensus       166 p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~---~~~e~~g  241 (386)
T PF14583_consen  166 PHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRR---MEGESVG  241 (386)
T ss_dssp             --EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS------TTEEEE
T ss_pred             CCceEEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecC---CCCcccc
Confidence            11235556777777654443 3566778888764   4444432   22 125555443  222211111   1122222


Q ss_pred             EEe---CCCEEEEEe-----CCCcEEEEECCCceEEEEEcCCcccEEEE--EeCCCEEEEEeCC----------------
Q psy9182         363 VDF---DEKYIVSAS-----GDRTIKVWNTSSCEFVRTLNGHKRGIACL--QYRDRLVVSGSSD----------------  416 (486)
Q Consensus       363 ~~~---~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d----------------  416 (486)
                      =.|   ||..+.--+     .+..|.-+|+.+++........  ...-+  +.++++++-=+.|                
T Consensus       242 HEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p--~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~  319 (386)
T PF14583_consen  242 HEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP--WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIEND  319 (386)
T ss_dssp             EEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---SEEEEEE-TTSSEEEEEE------------------
T ss_pred             cccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC--ceeeeEEcCCCCEEEecCCCCCccccccccceecCC
Confidence            222   666544322     2345777788877543322211  12122  2246666543333                


Q ss_pred             CcEEEEECCCCeeeEEe---------cCcc---cCeEEEEecCCE-EEEEeCCCcEEEEeCC
Q psy9182         417 NTIRLWDIECGACLRVL---------EGHE---ELVRCIRFDAKR-IVSGAYDGKIKVWNLV  465 (486)
Q Consensus       417 g~v~iwd~~~~~~~~~~---------~~h~---~~v~~~~~~~~~-l~s~~~dg~v~iwdl~  465 (486)
                      --|++++++.++.....         .++.   .+=.++.+|+++ |.++...|...||-++
T Consensus       320 p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~  381 (386)
T PF14583_consen  320 PWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE  381 (386)
T ss_dssp             -EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred             cEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence            25677888876653221         1111   122234448887 5566678887777654

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=94.94  E-value=3.6  Score=39.22  Aligned_cols=86  Identities=19%  Similarity=0.280  Sum_probs=55.0

Q ss_pred             eEEEEeCCCEEEEEecCCeEEE---EECC-----CceeeEEEcC---Cc--ccEEEEEe-------------cCCEEEEE
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKV---WDRV-----SLQCIKVLTG---HT--GSVLCLQY-------------DERVIISG  290 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i---~d~~-----~~~~~~~~~~---~~--~~v~~~~~-------------~~~~l~~~  290 (486)
                      .++++++++.++.+..+..+.+   |+..     .+.......+   +.  ..|+++.+             |...+++|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            4577889999999877776555   5321     1122222211   11  45665544             24689999


Q ss_pred             eCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182         291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       291 ~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~  323 (486)
                      ..+|.|++|.. +|.++.....|..+|..+...
T Consensus        86 ~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   86 TSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             ecccEEEEEec-cchHHHHHhcCccceEEEEec
Confidence            99999999996 577666666677777777663

>KOG4499|consensus

Probab=94.88  E-value=1.4  Score=37.49  Aligned_cols=47  Identities=9%  Similarity=0.089  Sum_probs=35.6

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecC
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE  284 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  284 (486)
                      +++..+|.+.++.-..|+|...|..+|+.+..++-....|+|.+|.|
T Consensus       217 m~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  217 MTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             ceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence            44555777777777777888888888888888877777788888844

>PLN02153 epithiospecifier protein

Probab=94.75  E-value=3.7  Score=38.46  Aligned_cols=172  Identities=13%  Similarity=0.115  Sum_probs=84.3

Q ss_pred             cEEEEECCCCcEEEEecc---cCc---cEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEee-----ecCcc
Q psy9182         295 TVRVWDVNTGEMVNTLIH---HCE---AVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVL-----VGHRA  358 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~---~~~---~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~-----~~~~~  358 (486)
                      .+.+||+.+.+-...-..   ...   ....+.+.+..++.|+.+     ..+.+||+.+.+-.. ...+     .....
T Consensus        51 ~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~~~p~~R~  129 (341)
T PLN02153         51 DLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKNEWTF-LTKLDEEGGPEART  129 (341)
T ss_pred             cEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCCEEEE-eccCCCCCCCCCce
Confidence            477888876543321111   011   122334445566666643     357888887643211 1111     00111


Q ss_pred             cEEEEEeCCCEEEEEeCC-----------CcEEEEECCCceEEEE--Ec---CCcccEEEEEeCCCEEEEEeCC------
Q psy9182         359 AVNVVDFDEKYIVSASGD-----------RTIKVWNTSSCEFVRT--LN---GHKRGIACLQYRDRLVVSGSSD------  416 (486)
Q Consensus       359 ~v~~~~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~--~~---~~~~~v~~~~~~~~~l~~~~~d------  416 (486)
                      .-.....+++..+.|+.+           ..+.+||..+.+-...  ..   ..........+++++++.|+.+      
T Consensus       130 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~g  209 (341)
T PLN02153        130 FHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPG  209 (341)
T ss_pred             eeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccC
Confidence            112233366766666643           2477889877543221  11   1112223445677776665532      


Q ss_pred             -------CcEEEEECCCCee--eEEe---cCcccCeEEEEecCCEEEEEeCC--------------CcEEEEeCCCC
Q psy9182         417 -------NTIRLWDIECGAC--LRVL---EGHEELVRCIRFDAKRIVSGAYD--------------GKIKVWNLVAA  467 (486)
Q Consensus       417 -------g~v~iwd~~~~~~--~~~~---~~h~~~v~~~~~~~~~l~s~~~d--------------g~v~iwdl~~~  467 (486)
                             ..|.+||+.+.+=  +...   ........++.+++..++.|+..              ..|..+|+.+.
T Consensus       210 G~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~  286 (341)
T PLN02153        210 GKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL  286 (341)
T ss_pred             CccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence                   4688899876532  2211   11112233444577778888752              25777887654

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=94.69  E-value=3.9  Score=38.50  Aligned_cols=301  Identities=12%  Similarity=0.104  Sum_probs=140.0

Q ss_pred             ccCcceEEEe---------ecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         113 NFDEKYIVSA---------SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       113 s~~~~~l~tg---------~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      |||+++++..         +..+.+.|+|+.+++....... ...+....|+               ++++.++... ++
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~s---------------P~g~~~~~v~-~~   63 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWS---------------PDGKYIAFVR-DN   63 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE----------------SSSTEEEEEE-TT
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceee---------------cCCCeeEEEe-cC
Confidence            5788877773         4457899999998764443333 4566777776               4555555443 56


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC-CeEEEEECC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD-NTIKVWDRV  262 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-g~i~i~d~~  262 (486)
                      .|.+++..+.........+.    .........|...+..        -.....+.++||+++|+....| ..|..+.+.
T Consensus        64 nly~~~~~~~~~~~lT~dg~----~~i~nG~~dwvyeEEv--------~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~  131 (353)
T PF00930_consen   64 NLYLRDLATGQETQLTTDGE----PGIYNGVPDWVYEEEV--------FDRRSAVWWSPDSKYLAFLRFDEREVPEYPLP  131 (353)
T ss_dssp             EEEEESSTTSEEEESES--T----TTEEESB--HHHHHHT--------SSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE
T ss_pred             ceEEEECCCCCeEEeccccc----eeEEcCccceeccccc--------cccccceEECCCCCEEEEEEECCcCCceEEee
Confidence            67777765543332222110    0000111111111100        1234567899999998876544 233333211


Q ss_pred             CceeeEEEcCCc---ccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE-Ee----cccCccEEEEEEcCC-e-EEEE
Q psy9182         263 SLQCIKVLTGHT---GSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN-TL----IHHCEAVLHLRFSNG-M-MVTC  330 (486)
Q Consensus       263 ~~~~~~~~~~~~---~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~-~~----~~~~~~i~~~~~~~~-~-l~~~  330 (486)
                            ......   ..+..+.+  -|.-...    -.+.++|+.+++... ..    ......+..+.|.++ . +++.
T Consensus       132 ------~~~~~~~~yp~~~~~~YPk~G~~np~----v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~  201 (353)
T PF00930_consen  132 ------DYSPPDSQYPEVESIRYPKAGDPNPR----VSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQ  201 (353)
T ss_dssp             ------EESSSTESS-EEEEEE--BTTS---E----EEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEE
T ss_pred             ------ccCCccccCCcccccccCCCCCcCCc----eEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEE
Confidence                  111111   12344443  1221111    146778888776532 11    233456778888644 2 4433


Q ss_pred             e--CC---CcEEEEECCCCCceeeEEeeecC-c--ccEEEEE-e-CCCEEEEEeCCCc--EEEEECCCceEEEEEcCCcc
Q psy9182         331 S--KD---RSIAVWDMVSPNEITLRRVLVGH-R--AAVNVVD-F-DEKYIVSASGDRT--IKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       331 ~--~d---g~i~i~d~~~~~~~~~~~~~~~~-~--~~v~~~~-~-~~~~l~~~~~d~~--i~iwd~~~~~~~~~~~~~~~  398 (486)
                      -  .+   ..+.++|..++............ -  ....... . ++.++.....+|.  |.+++...+. ...+....-
T Consensus       202 ~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~  280 (353)
T PF00930_consen  202 WLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDW  280 (353)
T ss_dssp             EEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS
T ss_pred             EcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCce
Confidence            2  22   24666777665543222211110 0  1111111 2 3445666667775  5555665555 445554555


Q ss_pred             cEEE-EEe--CCC-EEEEEeCC----CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEE
Q psy9182         399 GIAC-LQY--RDR-LVVSGSSD----NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSG  453 (486)
Q Consensus       399 ~v~~-~~~--~~~-~l~~~~~d----g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~  453 (486)
                      .|.. +.+  .++ +.+++..+    ..|..-++..+..+..+......-..+.|  ++++++-.
T Consensus       281 ~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~  345 (353)
T PF00930_consen  281 EVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT  345 (353)
T ss_dssp             -EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred             eecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence            5544 333  344 44555543    34555566623334555444333346666  77775543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=94.65  E-value=3.7  Score=38.07  Aligned_cols=137  Identities=12%  Similarity=0.126  Sum_probs=68.5

Q ss_pred             EEEcCCeEEEEeCC-----CcEEEEECCCCCce---eeEEeeecCcccEEEEEeCCCEEEEEeC-----CCcEEEEECCC
Q psy9182         320 LRFSNGMMVTCSKD-----RSIAVWDMVSPNEI---TLRRVLVGHRAAVNVVDFDEKYIVSASG-----DRTIKVWNTSS  386 (486)
Q Consensus       320 ~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~l~~~~~-----d~~i~iwd~~~  386 (486)
                      +...+..++.|+.+     ..+..||+.+....   .....+........+...++...+.|+.     ...+..||+.+
T Consensus        69 ~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~  148 (323)
T TIGR03548        69 VSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLET  148 (323)
T ss_pred             EEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCC
Confidence            34445566666654     35667777665421   1111111111222333447777777764     24588899876


Q ss_pred             ceEE--EEEcC-CcccEEEEEeCCCEEEEEeCCC----cEEEEECCCCee--eEEec-Cc-c---cCeEEEEe-cCCEEE
Q psy9182         387 CEFV--RTLNG-HKRGIACLQYRDRLVVSGSSDN----TIRLWDIECGAC--LRVLE-GH-E---ELVRCIRF-DAKRIV  451 (486)
Q Consensus       387 ~~~~--~~~~~-~~~~v~~~~~~~~~l~~~~~dg----~v~iwd~~~~~~--~~~~~-~h-~---~~v~~~~~-~~~~l~  451 (486)
                      .+-.  ..+.. ......++..++++.+.|+.++    .+.+||.++.+=  +..+. .+ .   ....++.. ++..++
T Consensus       149 ~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv  228 (323)
T TIGR03548       149 QEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLC  228 (323)
T ss_pred             CCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEE
Confidence            5432  22221 1122233456778888887664    356888876432  22111 00 0   01222344 677788


Q ss_pred             EEeCC
Q psy9182         452 SGAYD  456 (486)
Q Consensus       452 s~~~d  456 (486)
                      .||.+
T Consensus       229 ~GG~~  233 (323)
T TIGR03548       229 IGGFN  233 (323)
T ss_pred             ECCcC
Confidence            88876

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PLN02193 nitrile-specifier protein

Probab=94.55  E-value=5.2  Score=39.34  Aligned_cols=187  Identities=11%  Similarity=0.024  Sum_probs=96.9

Q ss_pred             EeCCCEEEEEecC-------CeEEEEECCCceeeEEEcC---Cc----ccEEEEEecCCEEEEEeCC-----CcEEEEEC
Q psy9182         241 QYDDHKIVSGLRD-------NTIKVWDRVSLQCIKVLTG---HT----GSVLCLQYDERVIISGSSD-----STVRVWDV  301 (486)
Q Consensus       241 ~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~---~~----~~v~~~~~~~~~l~~~~~d-----g~i~vwd~  301 (486)
                      ..++..++.|+.+       ..+.+||..+.+-.. +..   ..    .....+..++.+.+.|+.+     ..+..||+
T Consensus       173 ~~~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~-~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~  251 (470)
T PLN02193        173 QVGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSI-SPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDT  251 (470)
T ss_pred             EECCEEEEECCcCCCCCCeeCcEEEEECCCCEEEe-CCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEEC
Confidence            3456666677643       247788877654221 111   01    1112334467777777755     35888998


Q ss_pred             CCCcEEEEecc-----cCccEEEEEEcCCeEEEEeCCC-----cEEEEECCCCCceeeEE--eeecCcccEEEEEeCCCE
Q psy9182         302 NTGEMVNTLIH-----HCEAVLHLRFSNGMMVTCSKDR-----SIAVWDMVSPNEITLRR--VLVGHRAAVNVVDFDEKY  369 (486)
Q Consensus       302 ~~~~~~~~~~~-----~~~~i~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~  369 (486)
                      .+.+....-..     ...........+..++.|+.++     .+..||+.+.+-.....  ..............+++.
T Consensus       252 ~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~~~gki  331 (470)
T PLN02193        252 TTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEVVQGKV  331 (470)
T ss_pred             CCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEEECCcE
Confidence            87654332111     1111122223344556666443     46778876643211000  000111222233457777


Q ss_pred             EEEEeCC----CcEEEEECCCceEEEEEc-----CCcccEEEEEeCCCEEEEEeCC--------------CcEEEEECCC
Q psy9182         370 IVSASGD----RTIKVWNTSSCEFVRTLN-----GHKRGIACLQYRDRLVVSGSSD--------------NTIRLWDIEC  426 (486)
Q Consensus       370 l~~~~~d----~~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d--------------g~v~iwd~~~  426 (486)
                      ++.++.+    ..+.+||+.+.+-...-.     .......++..++++++.|+.+              ..+.+||+.+
T Consensus       332 yviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t  411 (470)
T PLN02193        332 WVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDTET  411 (470)
T ss_pred             EEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEcCc
Confidence            7777655    458999998865433211     1112234555677888888753              2478889876


Q ss_pred             Ce
Q psy9182         427 GA  428 (486)
Q Consensus       427 ~~  428 (486)
                      .+
T Consensus       412 ~~  413 (470)
T PLN02193        412 LQ  413 (470)
T ss_pred             CE
Confidence            54

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.47  E-value=2.5  Score=35.35  Aligned_cols=170  Identities=15%  Similarity=0.194  Sum_probs=99.0

Q ss_pred             EEe-cCCEEEEEeC--CCcEEEEECCCCcEEEEecccCccEE--EEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEee
Q psy9182         280 LQY-DERVIISGSS--DSTVRVWDVNTGEMVNTLIHHCEAVL--HLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVL  353 (486)
Q Consensus       280 ~~~-~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~--~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~  353 (486)
                      +.. ++.++.+.+.  ...|++||+++++.+....-....+.  .+.-.++ .....-.+|.-..||.++-+......  
T Consensus        51 L~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~--  128 (262)
T COG3823          51 LEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS--  128 (262)
T ss_pred             eeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc--
Confidence            444 5555555544  34699999999988766543321221  1122233 33344467788888888766543221  


Q ss_pred             ecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcC--Cc---ccEEEEEe-CCCEEEEEeCCCcEEEEECCCC
Q psy9182         354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG--HK---RGIACLQY-RDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       354 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~---~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                        ..+.-..+..|+..|+.++...+++.-|.++.....++.-  ..   ..++-+.| +|.+.|-.-.+..|...|.++|
T Consensus       129 --y~GeGWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sG  206 (262)
T COG3823         129 --YEGEGWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSG  206 (262)
T ss_pred             --cCCcceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCC
Confidence              2344556777777788777777888888777554444331  11   22334444 4666665556666777777777


Q ss_pred             eeeEEec------------CcccCeEEEEe--cC-CEEEEE
Q psy9182         428 ACLRVLE------------GHEELVRCIRF--DA-KRIVSG  453 (486)
Q Consensus       428 ~~~~~~~------------~h~~~v~~~~~--~~-~~l~s~  453 (486)
                      +.+..+.            .|....+.|++  ++ +++++|
T Consensus       207 rV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         207 RVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             cEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            7665543            24456678888  33 345554

>KOG1897|consensus

Probab=94.41  E-value=7.4  Score=40.51  Aligned_cols=140  Identities=13%  Similarity=0.165  Sum_probs=92.5

Q ss_pred             CCEEEEEe----------cCCeEEEEECCCceeeEEEcC--CcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         244 DHKIVSGL----------RDNTIKVWDRVSLQCIKVLTG--HTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       244 ~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                      +.++++|+          ..|.|.+|....+..++....  -.+.+.++.. +|+++|.-  +..|++|+..+++.++.-
T Consensus       787 ~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fngkllA~I--n~~vrLye~t~~~eLr~e  864 (1096)
T KOG1897|consen  787 NTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNGKLLAGI--NQSVRLYEWTTERELRIE  864 (1096)
T ss_pred             ceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhhCCeEEEec--CcEEEEEEccccceehhh
Confidence            56777775          247788887666433333322  2355666544 77777654  567999999988777666


Q ss_pred             cccCccEEEEEE--cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECC
Q psy9182         311 IHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       311 ~~~~~~i~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~  385 (486)
                      ..+...+..+..  .++.+++|.--+.+.+...+..+.........-+....+++.+ ++..++.+..+|.+.+...+
T Consensus       865 ~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  865 CNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKD  942 (1096)
T ss_pred             hcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEecCceEEeecccccEEEEEec
Confidence            666666655554  5889999998888887666554422222333346677778877 78888888888888877544

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=94.10  E-value=3  Score=34.87  Aligned_cols=151  Identities=15%  Similarity=0.059  Sum_probs=92.1

Q ss_pred             CCCEEEEEecCC--eEEEEECCCceeeEEEcCCcccEEE--EEecCCEE-EEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         243 DDHKIVSGLRDN--TIKVWDRVSLQCIKVLTGHTGSVLC--LQYDERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       243 ~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      ++.++.+.+.-|  .|++||+.+++.+...+-....+..  +.--++.+ .-.-.+|.-..+|.++.+++..+.- .+.-
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y-~GeG  133 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY-EGEG  133 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc-CCcc
Confidence            455555555433  7999999999887665433222211  21222332 2334578888999998888776643 3444


Q ss_pred             EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEee-ec-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL-VG-HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~-~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      ..++..+..++.+.....++.-|..+-......... .+ .-...+-+.+ +|...+-.-.+..|...|.++|+.+..+.
T Consensus       134 WgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~wid  213 (262)
T COG3823         134 WGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAWID  213 (262)
T ss_pred             eeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEEEE
Confidence            566666667777777777887776654433222221 11 1123344555 77777777777778888888888776654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=93.97  E-value=0.064  Score=33.02  Aligned_cols=33  Identities=9%  Similarity=-0.006  Sum_probs=28.7

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccc
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF  138 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~  138 (486)
                      ..+.++.++|..++||.|..+|.|.++.+ +++.
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            45778899999999999999999999998 5554

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.67  E-value=2.1  Score=37.66  Aligned_cols=183  Identities=11%  Similarity=0.133  Sum_probs=93.4

Q ss_pred             EEEeCCCEEEEEecC-----CeEEEEECCCc-eeeEEEcCCcccEEEEEe--cCCEEEEEeCC-----------------
Q psy9182         239 CLQYDDHKIVSGLRD-----NTIKVWDRVSL-QCIKVLTGHTGSVLCLQY--DERVIISGSSD-----------------  293 (486)
Q Consensus       239 ~~~~~~~~l~~~~~d-----g~i~i~d~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----------------  293 (486)
                      ++++||.+|...-.|     |.|-|||.+.+ +.+-.+..|.-.-..+.+  ||+.++.+...                 
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM  199 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM  199 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence            578899998876543     78999998753 345566666655566666  88888776321                 


Q ss_pred             -CcEEEEECCCCcEEEEe--c--ccCccEEEEEEcCC-eEEEEeC-CCc-----EEEEECCCCCceeeEEe----eecCc
Q psy9182         294 -STVRVWDVNTGEMVNTL--I--HHCEAVLHLRFSNG-MMVTCSK-DRS-----IAVWDMVSPNEITLRRV----LVGHR  357 (486)
Q Consensus       294 -g~i~vwd~~~~~~~~~~--~--~~~~~i~~~~~~~~-~l~~~~~-dg~-----i~i~d~~~~~~~~~~~~----~~~~~  357 (486)
                       -.+.+.|..+|+.+.+.  .  .+...+..+...++ .++.|+. .|.     -.+=-...++.+.....    .....
T Consensus       200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~a  279 (366)
T COG3490         200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFA  279 (366)
T ss_pred             CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHH
Confidence             12333444445444322  1  22334555555432 3333331 110     00000111111111110    01122


Q ss_pred             ccEEEEEe--CCCEEEEEeC-CCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEE
Q psy9182         358 AAVNVVDF--DEKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWD  423 (486)
Q Consensus       358 ~~v~~~~~--~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd  423 (486)
                      ..|-+++.  +..+++..+- .+...+||..+|..+..-.-  ..+..+.....-+++.+.+|.+.++.
T Consensus       280 nYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l--~daaGva~~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         280 NYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAAL--PDAAGVAAAKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             hhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEecccc--cccccceeccCceEEecCCceEEecc
Confidence            34555555  3455555554 44567899999887654321  22333444444566666778877774

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=93.67  E-value=6.7  Score=37.35  Aligned_cols=195  Identities=15%  Similarity=0.121  Sum_probs=122.9

Q ss_pred             EEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEecCCEEEEEeC---CCcEEEEECCCCcEEEEeccc
Q psy9182         239 CLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQYDERVIISGSS---DSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       239 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      .+.+.+. ..+....++.|.+.|..+.+....... ....-..+.++++.+.++..   ++.+.+.|..+++........
T Consensus        80 ~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG  159 (381)
T COG3391          80 AVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVG  159 (381)
T ss_pred             eeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecC
Confidence            4455555 445555568999999887777665542 22222444457766666655   689999999999888876544


Q ss_pred             CccEEEEEEcCC--eEEEE-eCCCcEEEEECCCCCceeeEE----eeecCcccEEEEEeCCCEEEEEeCC---CcEEEEE
Q psy9182         314 CEAVLHLRFSNG--MMVTC-SKDRSIAVWDMVSPNEITLRR----VLVGHRAAVNVVDFDEKYIVSASGD---RTIKVWN  383 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~-~~dg~i~i~d~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~l~~~~~d---~~i~iwd  383 (486)
                      ..+ ..+++.++  .+++. ..++.|.+.|........ ..    ...+.......+..++.++.+....   +.+...|
T Consensus       160 ~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id  237 (381)
T COG3391         160 NTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKID  237 (381)
T ss_pred             CCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEe
Confidence            444 67777653  44444 478999999976654331 11    1122233444555688866665544   5899999


Q ss_pred             CCCceEEEE-EcCCc--ccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEecC
Q psy9182         384 TSSCEFVRT-LNGHK--RGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       384 ~~~~~~~~~-~~~~~--~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~  435 (486)
                      ..++..... .....  ..-..+.+++..+.+.. ..+.|.+-|..+.........
T Consensus       238 ~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~  293 (381)
T COG3391         238 TATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPT  293 (381)
T ss_pred             CCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecc
Confidence            988877665 22222  22344556677777664 458899999988777766543

>KOG4499|consensus

Probab=93.36  E-value=4.6  Score=34.52  Aligned_cols=88  Identities=15%  Similarity=0.175  Sum_probs=60.6

Q ss_pred             EEEEeC--CC-EEEEEeCCCcEEEEE--CCCce-----EEEEEcCC------cccEEEEEeCCCEEEEEeCCCcEEEEEC
Q psy9182         361 NVVDFD--EK-YIVSASGDRTIKVWN--TSSCE-----FVRTLNGH------KRGIACLQYRDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       361 ~~~~~~--~~-~l~~~~~d~~i~iwd--~~~~~-----~~~~~~~~------~~~v~~~~~~~~~l~~~~~dg~v~iwd~  424 (486)
                      +.++|+  .+ +.++-+.+-.|.-||  ..+|.     .+..++..      ...=.++.-+|++.++.-..++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            456663  33 445556677787777  55543     23333321      1112344556889999999999999999


Q ss_pred             CCCeeeEEecCcccCeEEEEecCC
Q psy9182         425 ECGACLRVLEGHEELVRCIRFDAK  448 (486)
Q Consensus       425 ~~~~~~~~~~~h~~~v~~~~~~~~  448 (486)
                      .+|+.+.+++-....|++.+|-|.
T Consensus       241 ~tGK~L~eiklPt~qitsccFgGk  264 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFGGK  264 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEecCC
Confidence            999999999999999999999443

>KOG1898|consensus

Probab=92.86  E-value=14  Score=38.84  Aligned_cols=172  Identities=13%  Similarity=0.157  Sum_probs=107.6

Q ss_pred             cEEEEECCCCcEEEEecccCc----cEEEEEEcC--C--eEEEEe-----------CCCcEEEEECCCCCceeeEEeeec
Q psy9182         295 TVRVWDVNTGEMVNTLIHHCE----AVLHLRFSN--G--MMVTCS-----------KDRSIAVWDMVSPNEITLRRVLVG  355 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~~~----~i~~~~~~~--~--~l~~~~-----------~dg~i~i~d~~~~~~~~~~~~~~~  355 (486)
                      .|++.|..+++.+..+....+    .+..+.|+.  .  ++++|.           .+|.++.|++-........-....
T Consensus       854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~  933 (1205)
T KOG1898|consen  854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE  933 (1205)
T ss_pred             eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence            488889888877665543222    344555542  1  233332           345677777654333111122234


Q ss_pred             CcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-CeeeEE
Q psy9182         356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC-GACLRV  432 (486)
Q Consensus       356 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~  432 (486)
                      -...+.++..-..++++| ....+++||+...++++..+  .-...|+.+.+.+..+++|..--.|.++..+. +..+..
T Consensus       934 ~~~~v~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~RI~VgD~qeSV~~~~y~~~~n~l~~ 1012 (1205)
T KOG1898|consen  934 IPGPVGAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGARIVVGDIQESVHFVRYRREDNQLIV 1012 (1205)
T ss_pred             CCccceEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEeecceEEEEeeccceEEEEEEecCCCeEEE
Confidence            456777777755555555 34689999999887766544  23566888888888899988766666554432 334444


Q ss_pred             ecC--cccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         433 LEG--HEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       433 ~~~--h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +..  -...|+++.+ |-..++.|..=|.+.+-.+...
T Consensus      1013 fadD~~pR~Vt~~~~lD~~tvagaDrfGNi~~vR~P~d 1050 (1205)
T KOG1898|consen 1013 FADDPVPRHVTALELLDYDTVAGADRFGNIAVVRIPPD 1050 (1205)
T ss_pred             EeCCCccceeeEEEEecCCceeeccccCcEEEEECCCc
Confidence            432  2346788877 8899999988888888776653

>KOG2280|consensus

Probab=92.79  E-value=8.8  Score=38.72  Aligned_cols=48  Identities=19%  Similarity=0.326  Sum_probs=35.7

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECC
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~  302 (486)
                      -.|+||++. |..+..+.-..+.+..+.| +...|++...+|++++|++-
T Consensus        64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~  112 (829)
T KOG2280|consen   64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLL  112 (829)
T ss_pred             eeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecc
Confidence            357888754 5555544434457889999 66788889999999999985

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=92.38  E-value=9.4  Score=38.92  Aligned_cols=98  Identities=13%  Similarity=0.242  Sum_probs=64.6

Q ss_pred             CCCEEEEEeCCCcEEEEECCC-------c----e---------EEEEEcCCcccEEEEEeC----CCEEEEEeCCCcEEE
Q psy9182         366 DEKYIVSASGDRTIKVWNTSS-------C----E---------FVRTLNGHKRGIACLQYR----DRLVVSGSSDNTIRL  421 (486)
Q Consensus       366 ~~~~l~~~~~d~~i~iwd~~~-------~----~---------~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~v~i  421 (486)
                      +...|+.+..||.|.+|.+++       .    +         +...+. -...+..+++.    .++||+++....|.|
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV  191 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTV  191 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEE
Confidence            567899999999999997532       0    0         111111 12345566664    678888888888888


Q ss_pred             EECCCC-eee--EEecCcccCeEEEEe-----cCC---EEEEEeCCCcEEEEeC
Q psy9182         422 WDIECG-ACL--RVLEGHEELVRCIRF-----DAK---RIVSGAYDGKIKVWNL  464 (486)
Q Consensus       422 wd~~~~-~~~--~~~~~h~~~v~~~~~-----~~~---~l~s~~~dg~v~iwdl  464 (486)
                      |-.... +..  ..-..|...|.+|+|     ++.   .|++++-.|.+.+|++
T Consensus       192 Faf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  192 FAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            866532 111  111135667999999     233   7888999999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=92.21  E-value=1.4  Score=38.00  Aligned_cols=33  Identities=15%  Similarity=0.412  Sum_probs=17.3

Q ss_pred             cccEEEEEeCCCEEEEEeCCCcEEEEECCCceE
Q psy9182         357 RAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       357 ~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ...+..+..++.++++.+.+|.+++||+.+++.
T Consensus        12 gs~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~   44 (219)
T PF07569_consen   12 GSPVSFLECNGSYLLAITSSGLLYVWNLKKGKA   44 (219)
T ss_pred             CCceEEEEeCCCEEEEEeCCCeEEEEECCCCee
Confidence            334444444555555555555555555555444

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=92.15  E-value=10  Score=35.51  Aligned_cols=80  Identities=11%  Similarity=0.074  Sum_probs=39.4

Q ss_pred             CcEEEEECCCceEE--EEEcC-CcccEEEEEeCCCEEEEEeCCC------cEEEEECCC----CeeeEEecC-----ccc
Q psy9182         377 RTIKVWNTSSCEFV--RTLNG-HKRGIACLQYRDRLVVSGSSDN------TIRLWDIEC----GACLRVLEG-----HEE  438 (486)
Q Consensus       377 ~~i~iwd~~~~~~~--~~~~~-~~~~v~~~~~~~~~l~~~~~dg------~v~iwd~~~----~~~~~~~~~-----h~~  438 (486)
                      ..+..||..+.+-.  ..+.. .......+..++++.+.|+.+.      .+.++++..    ...+..+..     |..
T Consensus       168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y~~~~~~~~W~~~~~m~~~r~~~~~~  247 (346)
T TIGR03547       168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGEIKPGLRTAEVKQYLFTGGKLEWNKLPPLPPPKSSSQEG  247 (346)
T ss_pred             ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeeeeCCCccchheEEEEecCCCceeeecCCCCCCCCCcccc
Confidence            45888998775432  22221 1122334455778888777531      245565532    222222211     111


Q ss_pred             --CeEEEEecCCEEEEEeCC
Q psy9182         439 --LVRCIRFDAKRIVSGAYD  456 (486)
Q Consensus       439 --~v~~~~~~~~~l~s~~~d  456 (486)
                        ....+.++++..+.|+.+
T Consensus       248 ~~~~~a~~~~~~Iyv~GG~~  267 (346)
T TIGR03547       248 LAGAFAGISNGVLLVAGGAN  267 (346)
T ss_pred             ccEEeeeEECCEEEEeecCC
Confidence              112344577877888754

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=92.12  E-value=9.7  Score=38.37  Aligned_cols=97  Identities=15%  Similarity=0.229  Sum_probs=63.1

Q ss_pred             CCEEEEEeCCCcEEEEECCCceEEEEEc-CCcccEEEEEe----CCCEEEEEeCCCcEEEEECC---------CCeeeEE
Q psy9182         367 EKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQY----RDRLVVSGSSDNTIRLWDIE---------CGACLRV  432 (486)
Q Consensus       367 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~----~~~~l~~~~~dg~v~iwd~~---------~~~~~~~  432 (486)
                      ++..++.+....+.|||.+.+.....-. ...+.|..+.|    +++.+++.+-.+.|.++.-.         +...+..
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~  120 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRK  120 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEE
Confidence            3444444445679999999887554433 45678888888    47888888888899888541         1233333


Q ss_pred             e--cCcc-cCeEEEEe-cCCEEEEEeCCCcEEEEeC
Q psy9182         433 L--EGHE-ELVRCIRF-DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       433 ~--~~h~-~~v~~~~~-~~~~l~s~~~dg~v~iwdl  464 (486)
                      +  ..|+ .+|.+..| .+..|++|+ ++.+.|+|=
T Consensus       121 i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk  155 (631)
T PF12234_consen  121 IDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDK  155 (631)
T ss_pred             EEeecCCCCCccceeEecCCeEEEEe-CCEEEEECC
Confidence            3  3344 57999999 444455444 566888873

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=91.93  E-value=4.1  Score=38.97  Aligned_cols=138  Identities=15%  Similarity=0.216  Sum_probs=83.6

Q ss_pred             CCEEE-EEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC---------CeEEEEeCCCcEEEEECCCCC-ceeeEEe
Q psy9182         284 ERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---------GMMVTCSKDRSIAVWDMVSPN-EITLRRV  352 (486)
Q Consensus       284 ~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~---------~~l~~~~~dg~i~i~d~~~~~-~~~~~~~  352 (486)
                      .++++ .|+....++--|++.|+.+..+..+...+  +.|.|         ..-++|-.+..|.-.|.+-.. .+.....
T Consensus       479 ssli~~dg~~~~kLykmDIErGkvveeW~~~ddvv--Vqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~es  556 (776)
T COG5167         479 SSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDVV--VQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVES  556 (776)
T ss_pred             cceEEecCCCcccceeeecccceeeeEeecCCcce--eecCCchhHHhcCccceEEeecccceEEecccccCCceeeeee
Confidence            34433 45555678888999999999888776653  44443         245667777777777876543 2211111


Q ss_pred             --eecCcccEEEE-EeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         353 --LVGHRAAVNVV-DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       353 --~~~~~~~v~~~-~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~  425 (486)
                        ..+ .....+. .-...++++++..|.|++||.-..+....+++-...|..+..  +|.++++.+ ...+.+-|++
T Consensus       557 KdY~t-Kn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d~~  632 (776)
T COG5167         557 KDYKT-KNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTDVP  632 (776)
T ss_pred             hhccc-cccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence              111 1111222 226789999999999999996544444455666666655544  577766555 3466666663

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=91.85  E-value=3.5  Score=39.43  Aligned_cols=134  Identities=14%  Similarity=0.183  Sum_probs=79.9

Q ss_pred             EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-------cCCEEEEEeCCCcEEEEECCC-CcEEEEe-----cccC
Q psy9182         248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-------DERVIISGSSDSTVRVWDVNT-GEMVNTL-----IHHC  314 (486)
Q Consensus       248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~~~~~dg~i~vwd~~~-~~~~~~~-----~~~~  314 (486)
                      ..|+....++-.|++.|+.+..+..|...+.....       ....-++|-++..|.-.|.+- |..+...     ....
T Consensus       484 ~dg~~~~kLykmDIErGkvveeW~~~ddvvVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tKn  563 (776)
T COG5167         484 LDGGERDKLYKMDIERGKVVEEWDLKDDVVVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTKN  563 (776)
T ss_pred             ecCCCcccceeeecccceeeeEeecCCcceeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhccccc
Confidence            34555567777888999999988887766544332       122334455566666667653 2222211     1111


Q ss_pred             ccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~  385 (486)
                      .--..+.-..+++++++..|.|++||--..+..   ..+++....|..+..  +|.++++.+. .++.+-|++
T Consensus       564 ~Fss~~tTesGyIa~as~kGDirLyDRig~rAK---talP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         564 KFSSGMTTESGYIAAASRKGDIRLYDRIGKRAK---TALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             cccccccccCceEEEecCCCceeeehhhcchhh---hcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence            111222334679999999999999996443222   334455566666665  8888777665 567777754

>PRK13616 lipoprotein LpqB; Provisional

Probab=91.65  E-value=13  Score=37.53  Aligned_cols=104  Identities=15%  Similarity=0.202  Sum_probs=57.4

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEE---EECCCcee-e---EEEc-CCcccEEEEEe-cCCEEEEEeCCCcEEEEECCC-
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKV---WDRVSLQC-I---KVLT-GHTGSVLCLQY-DERVIISGSSDSTVRVWDVNT-  303 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i---~d~~~~~~-~---~~~~-~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~-  303 (486)
                      ....+.+++||..++... +|.|.+   -....|+. +   ..+. +-...+..+.| ++..|+++..++.-.+|.+.- 
T Consensus       449 ~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vD  527 (591)
T PRK13616        449 PISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLD  527 (591)
T ss_pred             CcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEEEEecCCCCceEEEecC
Confidence            355667889999888766 577777   44444541 1   1122 22233577888 444466666655555554432 


Q ss_pred             CcEEEEecc--cCccEEEEEEcCCeEEEEeCCCcEEE
Q psy9182         304 GEMVNTLIH--HCEAVLHLRFSNGMMVTCSKDRSIAV  338 (486)
Q Consensus       304 ~~~~~~~~~--~~~~i~~~~~~~~~l~~~~~dg~i~i  338 (486)
                      |.....+..  ....+..++-.++.+++...++.+.+
T Consensus       528 G~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~g~~~l  564 (591)
T PRK13616        528 GSNSDALPSRNLSAPVVAVAASPSTVYVTDARAVLQL  564 (591)
T ss_pred             CccccccCCCCccCceEEEecCCceEEEEcCCceEEe
Confidence            222222222  24556777777776777776664443

>PRK13616 lipoprotein LpqB; Provisional

Probab=91.14  E-value=19  Score=36.52  Aligned_cols=177  Identities=14%  Similarity=0.128  Sum_probs=85.0

Q ss_pred             eEEEEeCCCEEEEEe------cCC--eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC------------C
Q psy9182         237 VYCLQYDDHKIVSGL------RDN--TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD------------S  294 (486)
Q Consensus       237 v~~~~~~~~~l~~~~------~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d------------g  294 (486)
                      -..++++++.++...      .|+  .|.+++.. +.......+.  ....-+|  +|+.+++....            +
T Consensus       354 spaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g  430 (591)
T PRK13616        354 SAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATG  430 (591)
T ss_pred             cceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCC--CCCCceECCCCCceEEEecCcceEEEeccCCCc
Confidence            446778888876655      233  45555642 2222223332  2444455  56666655422            3


Q ss_pred             cEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEE---EECCCCCceee---EEeeecCcccEEEEEe-
Q psy9182         295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAV---WDMVSPNEITL---RRVLVGHRAAVNVVDF-  365 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i---~d~~~~~~~~~---~~~~~~~~~~v~~~~~-  365 (486)
                      .+.+.++..++...   .....|..+.|+++  .++... ++.|++   -....+. ..+   .....+-...+..+.| 
T Consensus       431 ql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~  505 (591)
T PRK13616        431 QLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWR  505 (591)
T ss_pred             eEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-eeecccEEeecccCCccccceEe
Confidence            34444444443322   22456999999875  444433 467776   3333332 111   1111222333567888 


Q ss_pred             CCCEEEEEeCCCcEEEEECCC-ceEEEEEcC--CcccEEEEEeCCCEEEEEeCCCcEEE
Q psy9182         366 DEKYIVSASGDRTIKVWNTSS-CEFVRTLNG--HKRGIACLQYRDRLVVSGSSDNTIRL  421 (486)
Q Consensus       366 ~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~v~i  421 (486)
                      ++..|+++..++.-.+|.+.- |.....+..  ....+..++-....++....+|.+.+
T Consensus       506 ~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~g~~~l  564 (591)
T PRK13616        506 TGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPSTVYVTDARAVLQL  564 (591)
T ss_pred             cCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCceEEEEcCCceEEe
Confidence            444455665555444554322 221112222  23455556555444555555554433

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=91.12  E-value=2  Score=37.07  Aligned_cols=67  Identities=13%  Similarity=0.214  Sum_probs=33.4

Q ss_pred             EEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEe-------c-------ccCccEEEEEEc-CCeEEEEeCCCcEEEEEC
Q psy9182         277 VLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL-------I-------HHCEAVLHLRFS-NGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       277 v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~-------~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~  341 (486)
                      +..+..+++++++.+.+|.+++||+.+++.+..-       .       .....|..+... .+..++.-.+|..+.|+.
T Consensus        15 ~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~   94 (219)
T PF07569_consen   15 VSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSP   94 (219)
T ss_pred             eEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEecc
Confidence            3334445555555566666666666555433211       0       123345555554 233344445667777775


Q ss_pred             CC
Q psy9182         342 VS  343 (486)
Q Consensus       342 ~~  343 (486)
                      .-
T Consensus        95 ~L   96 (219)
T PF07569_consen   95 DL   96 (219)
T ss_pred             cc
Confidence            44

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=91.01  E-value=0.67  Score=28.51  Aligned_cols=32  Identities=16%  Similarity=0.074  Sum_probs=25.9

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCcee
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC  266 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  266 (486)
                      .....+++|..+++|.|+.+|.|.+|.+ +++.
T Consensus        13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   13 RVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             cEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            3456778888999999999999999988 4443

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=90.53  E-value=16  Score=34.65  Aligned_cols=152  Identities=13%  Similarity=0.090  Sum_probs=92.8

Q ss_pred             CEEEEEecCCeEEEEECCCceeeEEEcCCcc-cEE-EEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCc---cE-E
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVL-CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AV-L  318 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~-~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~i-~  318 (486)
                      ..+++++.+|.+..+|..+|+.+........ .+. ........+..++.+|.+...|..+|+..........   .+ .
T Consensus       112 G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~  191 (370)
T COG1520         112 GKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYG  191 (370)
T ss_pred             CeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCcccccccc
Confidence            3488889999999999999999888776551 111 1112344555555789999999999998777544221   11 1


Q ss_pred             EEEEcCCeEEEEeC--CCcEEEEECCCCCceeeEEe--eecCccc--EEEEEe----CCCEEEEEeCCCcEEEEECCCce
Q psy9182         319 HLRFSNGMMVTCSK--DRSIAVWDMVSPNEITLRRV--LVGHRAA--VNVVDF----DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       319 ~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~--~~~~~~~--v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      ......+.++.+..  ++.+.-.|..++...-....  ..+....  ...+..    .+.-++.++.++.+...|..+++
T Consensus       192 ~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~  271 (370)
T COG1520         192 SPAIASGTVYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGE  271 (370)
T ss_pred             CceeecceEEEecCCCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCc
Confidence            11134556666666  66777788877765432111  1111100  001110    22334666777889999999999


Q ss_pred             EEEEEcCC
Q psy9182         389 FVRTLNGH  396 (486)
Q Consensus       389 ~~~~~~~~  396 (486)
                      .+..+...
T Consensus       272 ~~W~~~~~  279 (370)
T COG1520         272 LIWSFPAG  279 (370)
T ss_pred             eEEEEecc
Confidence            98888764

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=90.17  E-value=13  Score=32.88  Aligned_cols=192  Identities=9%  Similarity=0.118  Sum_probs=99.8

Q ss_pred             EEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCcEEEEeccc-CccEEEEEEcC-CeEEEEe-CCCcEEEEECC
Q psy9182         269 VLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMVNTLIHH-CEAVLHLRFSN-GMMVTCS-KDRSIAVWDMV  342 (486)
Q Consensus       269 ~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~~~-~~l~~~~-~dg~i~i~d~~  342 (486)
                      .+.+-...+..++++   +.++++....+.|..++. +|+.++.+... ....-.+++.+ +.++... .++.+.++++.
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~   94 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID   94 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence            455555668899993   346677777888988896 48888877543 34567777764 4555555 48889999884


Q ss_pred             CCCc-e--ee---EE--eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC---ceEEEE--Ec------CCcccEE
Q psy9182         343 SPNE-I--TL---RR--VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS---CEFVRT--LN------GHKRGIA  401 (486)
Q Consensus       343 ~~~~-~--~~---~~--~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~---~~~~~~--~~------~~~~~v~  401 (486)
                      .... .  ..   ..  ....+...+-.+++  .++.|+++-...-..+|.+..   ...+..  ..      .....+.
T Consensus        95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S  174 (248)
T PF06977_consen   95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS  174 (248)
T ss_dssp             ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred             ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence            4221 1  10   11  11123455777888  345666666665566666543   111111  11      1223456


Q ss_pred             EEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc---------cCeEEEEe-cCCEEEEEeCCCcEEEE
Q psy9182         402 CLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE---------ELVRCIRF-DAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       402 ~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~---------~~v~~~~~-~~~~l~s~~~dg~v~iw  462 (486)
                      .++++   +++++....+..|..+| .+|+.+..+.-..         ...-.|+| ....|...++-+..++|
T Consensus       175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f  247 (248)
T PF06977_consen  175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF  247 (248)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred             ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence            77775   56888888899999999 5588776653221         23567888 22345555666655554

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=90.12  E-value=20  Score=36.69  Aligned_cols=147  Identities=14%  Similarity=0.170  Sum_probs=85.3

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCceeeE------EEc----------------CCcccEEEEEe----cCCEEE
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK------VLT----------------GHTGSVLCLQY----DERVII  288 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------~~~----------------~~~~~v~~~~~----~~~~l~  288 (486)
                      ....+++. ..+++++. .+.|.||+........      .+.                .....|+-|..    +...|+
T Consensus        41 NNLtalsq-~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl  118 (717)
T PF08728_consen   41 NNLTALSQ-RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLL  118 (717)
T ss_pred             cceeEEec-CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEE
Confidence            34445554 66666654 7799999865432211      110                01122444433    457899


Q ss_pred             EEeCCCcEEEEECCC-------C----c---------EEEEecccCccEEEEEEc--C--CeEEEEeCCCcEEEEECCCC
Q psy9182         289 SGSSDSTVRVWDVNT-------G----E---------MVNTLIHHCEAVLHLRFS--N--GMMVTCSKDRSIAVWDMVSP  344 (486)
Q Consensus       289 ~~~~dg~i~vwd~~~-------~----~---------~~~~~~~~~~~i~~~~~~--~--~~l~~~~~dg~i~i~d~~~~  344 (486)
                      .+..||.|.+|.+++       .    +         +-..+. -...+..+++.  .  .++|+++....|.+|-....
T Consensus       119 ~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~  197 (717)
T PF08728_consen  119 LCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALV  197 (717)
T ss_pred             EEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEecc
Confidence            999999999997631       0    0         001111 13356777776  3  37777777888888766542


Q ss_pred             CceeeEEeeecCcccEEEEEe-----CCC---EEEEEeCCCcEEEEEC
Q psy9182         345 NEITLRRVLVGHRAAVNVVDF-----DEK---YIVSASGDRTIKVWNT  384 (486)
Q Consensus       345 ~~~~~~~~~~~~~~~v~~~~~-----~~~---~l~~~~~d~~i~iwd~  384 (486)
                      ...........+...|.+++|     ++.   .+++++-.|.+.+|++
T Consensus       198 ~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  198 DERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            211111112235566778888     223   7888889999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG2280|consensus

Probab=89.85  E-value=21  Score=36.31  Aligned_cols=33  Identities=12%  Similarity=0.164  Sum_probs=26.0

Q ss_pred             EEEeCCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         362 VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       362 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      +++++.++|+.-..+|.|.+-+.+..+....++
T Consensus       223 ~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~  255 (829)
T KOG2280|consen  223 SVSPNRRFLALYTETGKIWVVSIDLSQILCEFN  255 (829)
T ss_pred             EEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence            345578899999999999999888777666665

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=89.70  E-value=20  Score=34.59  Aligned_cols=137  Identities=22%  Similarity=0.187  Sum_probs=75.4

Q ss_pred             CcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEeCCC
Q psy9182         294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK  368 (486)
Q Consensus       294 g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~  368 (486)
                      ..+.++|+.+++....... ...-....|+|+   .+++...||.  |+++|+....... .....+.. .-.++.+||+
T Consensus       218 ~~i~~~~l~~g~~~~i~~~-~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~-~~Ps~spdG~  294 (425)
T COG0823         218 PRIYYLDLNTGKRPVILNF-NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGIN-TSPSWSPDGS  294 (425)
T ss_pred             ceEEEEeccCCccceeecc-CCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-cccCCccc-cCccCCCCCC
Confidence            4699999998876555432 222334456653   4555566665  5666777665322 11111111 1334555888


Q ss_pred             EEEEEeC-CC--cEEEEECCCceEEE-EEcCCcccEEEEEeCCCEEEEEeC-CCc--EEEEECCCCeeeEEe
Q psy9182         369 YIVSASG-DR--TIKVWNTSSCEFVR-TLNGHKRGIACLQYRDRLVVSGSS-DNT--IRLWDIECGACLRVL  433 (486)
Q Consensus       369 ~l~~~~~-d~--~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~l~~~~~-dg~--v~iwd~~~~~~~~~~  433 (486)
                      +++-.+. .|  .|.++|.+.....+ +..........++.+|++++..+. +|.  |.+.|+.++...+.+
T Consensus       295 ~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l  366 (425)
T COG0823         295 KIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL  366 (425)
T ss_pred             EEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc
Confidence            7776654 34  46677777665422 222222334555667888777664 344  777777666544433

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=89.60  E-value=24  Score=35.21  Aligned_cols=220  Identities=16%  Similarity=0.206  Sum_probs=117.2

Q ss_pred             CCCEEEEEecCCeEEEEECCCce---eeEEEcCCcccEEEEEe-cCC--EEEEEeCCC--cEEEEECCCCcEEEEecccC
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQ---CIKVLTGHTGSVLCLQY-DER--VIISGSSDS--TVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~-~~~--~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~  314 (486)
                      ++..++.+..+|.+....+....   .+..+..-.....++.+ +..  +++.|+.-|  .+..|....-+.+..+.. -
T Consensus       221 ~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N-~  299 (504)
T PF10433_consen  221 DGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPN-W  299 (504)
T ss_dssp             TSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE----
T ss_pred             CCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccC-c
Confidence            46778899999999888766533   12222110334456666 555  888888754  455555443444555543 5


Q ss_pred             ccEEEEEEcC------C------eEEEEe---CCCcEEEEECCCCCcee----eEEeeecCcccEEEEEeC---CCEEEE
Q psy9182         315 EAVLHLRFSN------G------MMVTCS---KDRSIAVWDMVSPNEIT----LRRVLVGHRAAVNVVDFD---EKYIVS  372 (486)
Q Consensus       315 ~~i~~~~~~~------~------~l~~~~---~dg~i~i~d~~~~~~~~----~~~~~~~~~~~v~~~~~~---~~~l~~  372 (486)
                      ++|.++..-+      .      .+++++   .+|.+++..-  +-...    ....+.+ ...+..+...   +.+++.
T Consensus       300 ~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~--Gi~~~~~~~~~~~l~~-v~~iW~l~~~~~~~~~lv~  376 (504)
T PF10433_consen  300 GPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN--GIGIEGLELASSELPG-VTGIWTLKLSSSDHSYLVL  376 (504)
T ss_dssp             -SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE--SBEEE--EEEEEEEST-EEEEEEE-SSSSSBSEEEE
T ss_pred             CCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec--cCCceeeeeeccCCCC-ceEEEEeeecCCCceEEEE
Confidence            6788777741      1      556554   4677887642  22111    1111111 3444455442   567777


Q ss_pred             EeCCCcEEEEECC---CceEEEEEc-----CCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEE
Q psy9182         373 ASGDRTIKVWNTS---SCEFVRTLN-----GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCI  443 (486)
Q Consensus       373 ~~~d~~i~iwd~~---~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~  443 (486)
                      +..+. -+++.+.   ..+.+....     .....+.+-...+..++=... ..|++.+...++....... ....|.+.
T Consensus       377 S~~~~-T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~-~~i~l~~~~~~~~~~~w~~~~~~~I~~a  454 (504)
T PF10433_consen  377 SFPNE-TRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTP-KGIRLIDLEDGKLTQEWKPPAGSIIVAA  454 (504)
T ss_dssp             EESSE-EEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEES-SEEEEEESSSTSEEEEEE-TTS---SEE
T ss_pred             EcCCc-eEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEec-CeEEEEECCCCeEEEEEeCCCCCeEEEE
Confidence            76654 4455553   333332221     122233444444555555554 3488888877777766543 34567777


Q ss_pred             EecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         444 RFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       444 ~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +.++.+++.+-.++.+..+.++...
T Consensus       455 ~~~~~~v~v~~~~~~~~~~~~~~~~  479 (504)
T PF10433_consen  455 SINDPQVLVALSGGELVYFELDDNK  479 (504)
T ss_dssp             EESSSEEEEEE-TTEEEEEEEETTE
T ss_pred             EECCCEEEEEEeCCcEEEEEEECCc
Confidence            7788888888889999999887543

...

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=89.60  E-value=21  Score=34.54  Aligned_cols=147  Identities=16%  Similarity=0.110  Sum_probs=77.7

Q ss_pred             EEeCCCEEEEE---ecC-CeEEEEECCCceeeEEEcC-CcccEEEEEecCCEEEE-EeCCCc--EEEEECCCCcEEEEec
Q psy9182         240 LQYDDHKIVSG---LRD-NTIKVWDRVSLQCIKVLTG-HTGSVLCLQYDERVIIS-GSSDST--VRVWDVNTGEMVNTLI  311 (486)
Q Consensus       240 ~~~~~~~l~~~---~~d-g~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~-~~~dg~--i~vwd~~~~~~~~~~~  311 (486)
                      +++++..++..   ... ..+.++++.+++....... -......+++||+.|+. ...||.  |++.|+.+++.. .+.
T Consensus       200 ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt  278 (425)
T COG0823         200 WSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLT  278 (425)
T ss_pred             cCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-ecc
Confidence            44555543332   222 4689999988776655541 12233455668776554 445555  666788776633 343


Q ss_pred             ccCccEEEEEEcCC---eEEEEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-Cc--EEEEE
Q psy9182         312 HHCEAVLHLRFSNG---MMVTCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-RT--IKVWN  383 (486)
Q Consensus       312 ~~~~~i~~~~~~~~---~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-~~--i~iwd  383 (486)
                      ...+.-..-.|+|+   .+++.+..|.  |.++|.+.....  ................||++++..+.. |.  |.+.|
T Consensus       279 ~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~--riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~  356 (425)
T COG0823         279 NGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT--RLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKND  356 (425)
T ss_pred             cCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee--EeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEec
Confidence            32222234445543   4455555665  555555544432  222222333344555689888877643 43  66666


Q ss_pred             CCCceE
Q psy9182         384 TSSCEF  389 (486)
Q Consensus       384 ~~~~~~  389 (486)
                      +.++..
T Consensus       357 ~~~~~~  362 (425)
T COG0823         357 LASGGK  362 (425)
T ss_pred             cCCCCc
Confidence            655543

>KOG1916|consensus

Probab=89.42  E-value=0.26  Score=49.87  Aligned_cols=167  Identities=16%  Similarity=0.269  Sum_probs=92.5

Q ss_pred             CcEEEEECC--CCcEEEE-----ecccCccEEEEEEcC-----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCccc--
Q psy9182         294 STVRVWDVN--TGEMVNT-----LIHHCEAVLHLRFSN-----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA--  359 (486)
Q Consensus       294 g~i~vwd~~--~~~~~~~-----~~~~~~~i~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--  359 (486)
                      |.+.|||+.  .|+....     .......+.-+.|.+     -++..+-.++.+++.+......    ..+.+|...  
T Consensus       153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~----~l~rsHs~~~~  228 (1283)
T KOG1916|consen  153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR----SLFRSHSQRVT  228 (1283)
T ss_pred             hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH----HHHHhcCCCcc
Confidence            667777764  3332221     222233334444442     2555666778888877654322    222234433  


Q ss_pred             -----------EEEEEeCCCEEEEEeCCCcEEEEEC-----CCceEEEEEcCCc-ccEEEEEeCC-----------CEEE
Q psy9182         360 -----------VNVVDFDEKYIVSASGDRTIKVWNT-----SSCEFVRTLNGHK-RGIACLQYRD-----------RLVV  411 (486)
Q Consensus       360 -----------v~~~~~~~~~l~~~~~d~~i~iwd~-----~~~~~~~~~~~~~-~~v~~~~~~~-----------~~l~  411 (486)
                                 +..+++||..++..+.||.++.|.+     ...+++..++.|. .+-.|.-++.           .+++
T Consensus       229 d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~I  308 (1283)
T KOG1916|consen  229 DMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRI  308 (1283)
T ss_pred             cHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEE
Confidence                       3356669999999999998887764     3345566677776 3434433431           2344


Q ss_pred             EEeC-CCcEEEEECCCCeeeE--------EecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeC
Q psy9182         412 SGSS-DNTIRLWDIECGACLR--------VLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       412 ~~~~-dg~v~iwd~~~~~~~~--------~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl  464 (486)
                      +++. +..+++|.....+|+.        ....|.+.|+.+..   --..+++-+-|+.|++|.=
T Consensus       309 tttd~nre~k~w~~a~w~Cll~~~~d~v~iV~p~~~~v~~~~~~~~~~~~~v~r~v~~~i~~~qn  373 (1283)
T KOG1916|consen  309 TTTDVNREEKFWAEAPWQCLLDKLIDGVQIVGPHDGEVTDLSMCQWMTTRLVSRSVDGTIKIWQN  373 (1283)
T ss_pred             ecccCCcceeEeeccchhhhhhhcccceEeecCCCccccchhhhHHHHHHHHHhhhHHHHHHhhc
Confidence            4443 5569999987777761        11223333332211   1223566777888888863

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=88.58  E-value=21  Score=33.25  Aligned_cols=49  Identities=18%  Similarity=0.194  Sum_probs=31.4

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccc---eeee----cCcccceeEEEeecc
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEF---VRTL----NGHKRGIACLQYRDR  157 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~---~~~l----~~h~~~V~~~~~~~~  157 (486)
                      ..++++.|||+++++ ...|.|++.+ ..+..   +..+    .........+++++.
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~   59 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD   59 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence            456788899877776 4599999999 33332   2222    234456788888763

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG1983|consensus

Probab=88.56  E-value=15  Score=39.77  Aligned_cols=217  Identities=12%  Similarity=0.104  Sum_probs=102.6

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcc-cEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      +.....++.+..+.++.|+.+|.|++|....-+.......... .+..+.+  ..........+..+.+|.......+. 
T Consensus        36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~-  114 (993)
T KOG1983|consen   36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGVF-  114 (993)
T ss_pred             CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeecccccceee-
Confidence            4556788888999999999999999997554433322221111 1111111  12223333445556666554322221 


Q ss_pred             ecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCceeeEEe-eecCcccEEEEEeCCCEEEEEeCCCcEEEEECC-
Q psy9182         310 LIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRV-LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS-  385 (486)
Q Consensus       310 ~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~-  385 (486)
                         ....+.+....  .+. ..| ..+.+++||..-......... ...+...+        + ...+. ..-..|... 
T Consensus       115 ---~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~s~-~~~~~~~~~~  179 (993)
T KOG1983|consen  115 ---LKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVP--------Y-ESLSP-TLSIEGLVID  179 (993)
T ss_pred             ---cCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccce--------e-eeecc-ceeeeccccc
Confidence               12223333322  234 555 888888888653322111100 00000000        0 00000 000011111 


Q ss_pred             CceEE-------EEEcCCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCC
Q psy9182         386 SCEFV-------RTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDG  457 (486)
Q Consensus       386 ~~~~~-------~~~~~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg  457 (486)
                      .+...       ..+..+...+.+..+ ...-.+.+..-+.+-+|+.........+.......   ..++..++++-.||
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~h~Dg  256 (993)
T KOG1983|consen  180 LDTVLISLPDAYLGLSLIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPNGQLE---SRDGSHFVSYHTDG  256 (993)
T ss_pred             cccceeecccccccccccccccceeeeecCCCcceeeeeeeeeehhcccccchhhcccccccC---ccCCceEEEEEecC
Confidence            11111       122223334444444 23334555566677777765433333332211111   55888999999999


Q ss_pred             cEEEEeCCCCC
Q psy9182         458 KIKVWNLVAAL  468 (486)
Q Consensus       458 ~v~iwdl~~~~  468 (486)
                      .+.+||+..+.
T Consensus       257 s~~fWd~s~g~  267 (993)
T KOG1983|consen  257 SYAFWDVSSGK  267 (993)
T ss_pred             CEEeeecCCCc
Confidence            99999998863

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=88.39  E-value=12  Score=36.18  Aligned_cols=28  Identities=21%  Similarity=0.415  Sum_probs=21.1

Q ss_pred             CeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         439 LVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       439 ~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .|.+++.  ..+.|++...+|.|.+|++..
T Consensus       191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             -EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             ceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            4778888  346799999999999999975

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=88.18  E-value=24  Score=35.74  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=63.6

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEc-CCcccEEEEEe----cCCEEEEEeCCCcEEEEECC-----C----CcEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQY----DERVIISGSSDSTVRVWDVN-----T----GEMVN  308 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~-----~----~~~~~  308 (486)
                      -++..++-+....+.|||...+.....-. ...+.|.++.|    +++.+++.+-.+.|.+|.-.     .    ...++
T Consensus        40 ~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~  119 (631)
T PF12234_consen   40 IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIR  119 (631)
T ss_pred             cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeE
Confidence            34444444445589999999887543332 35678999998    78888888888899998542     1    12333


Q ss_pred             Ee--ccc-CccEEEEEEcCC-eEEEEeCCCcEEEEEC
Q psy9182         309 TL--IHH-CEAVLHLRFSNG-MMVTCSKDRSIAVWDM  341 (486)
Q Consensus       309 ~~--~~~-~~~i~~~~~~~~-~l~~~~~dg~i~i~d~  341 (486)
                      .+  ..+ ..+|.+..|-++ .+++|+ ++.+.++|-
T Consensus       120 ~i~i~~~T~h~Igds~Wl~~G~LvV~s-GNqlfv~dk  155 (631)
T PF12234_consen  120 KIDISSHTPHPIGDSIWLKDGTLVVGS-GNQLFVFDK  155 (631)
T ss_pred             EEEeecCCCCCccceeEecCCeEEEEe-CCEEEEECC
Confidence            33  222 357888888765 555554 567888874

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG2063|consensus

Probab=87.66  E-value=41  Score=35.55  Aligned_cols=84  Identities=13%  Similarity=0.133  Sum_probs=43.6

Q ss_pred             eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      .++.| .|+...+-|...........   .-......+..+..|+++-+. +.|.||+..++.+++++..-...-+-++.
T Consensus       214 ~ll~~-kd~~gv~vd~~G~~~~~~~l---~ws~~P~~v~~~~PYlIa~~~-~~veI~s~~~~qlvQSI~~~~~~~~l~s~  288 (877)
T KOG2063|consen  214 ELLLG-KDNIGVVVDLNGIIAQRGTL---VWSEVPLSVVVESPYLIALLD-RSVEIRSKLDGQLVQSITPLSNGRSLLSA  288 (877)
T ss_pred             eEEEc-cCceEEEEecCCcccCCCce---EecccchhhcccCceEEEEcc-ccEEEEeccCHHHhhccccccccceeeec
Confidence            44444 66666666644322110000   011222234446667776655 49999999999888887533333333333


Q ss_pred             CCCEEEEEe
Q psy9182         406 RDRLVVSGS  414 (486)
Q Consensus       406 ~~~~l~~~~  414 (486)
                      +.+.+++.+
T Consensus       289 ~~~i~~~~~  297 (877)
T KOG2063|consen  289 HNGIIFVAS  297 (877)
T ss_pred             CCcEEEEEe
Confidence            444444444

>KOG1898|consensus

Probab=87.14  E-value=41  Score=35.72  Aligned_cols=133  Identities=10%  Similarity=0.072  Sum_probs=84.6

Q ss_pred             cCCeEEEEEC-CCceeeEEEc--CCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEe--cccCccEEEEEEcCCe
Q psy9182         252 RDNTIKVWDR-VSLQCIKVLT--GHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNGM  326 (486)
Q Consensus       252 ~dg~i~i~d~-~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~~  326 (486)
                      .+|.++.|+. ..++.+.-+.  .-.+.+.++.....++++|- ...+++||+-..++++..  +.....|..+.+....
T Consensus       910 ~~g~~ytyk~~~~g~~lellh~T~~~~~v~Ai~~f~~~~Lagv-G~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~~~R  988 (1205)
T KOG1898|consen  910 SSGFVYTYKFVRNGDKLELLHKTEIPGPVGAICPFQGRVLAGV-GRFLRLYDLGKKKLLRKCELKFIPNRISSIQTYGAR  988 (1205)
T ss_pred             CCCceEEEEEEecCceeeeeeccCCCccceEEeccCCEEEEec-ccEEEEeeCChHHHHhhhhhccCceEEEEEeecceE
Confidence            4556666663 2344332221  23456777777555666554 468999999877766544  2335678888888889


Q ss_pred             EEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECC
Q psy9182         327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~  385 (486)
                      +++|...-.+.++..+.............-...|+++.+ |...++.+..-|.+.+-.+.
T Consensus       989 I~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~lD~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen  989 IVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELLDYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred             EEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEecCCceeeccccCcEEEEECC
Confidence            999988777777666554433222333334556677766 88888888887777776543

>KOG1900|consensus

Probab=87.14  E-value=14  Score=39.89  Aligned_cols=135  Identities=10%  Similarity=0.181  Sum_probs=78.8

Q ss_pred             eCCCcEEEEECCCCcEEEEecccCccEEEEEEc---CC-------eEEEEeCCCcEEEEECCCCCceeeE------Eeee
Q psy9182         291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NG-------MMVTCSKDRSIAVWDMVSPNEITLR------RVLV  354 (486)
Q Consensus       291 ~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~---~~-------~l~~~~~dg~i~i~d~~~~~~~~~~------~~~~  354 (486)
                      +.|..+.+|+.+++.....+.+-...|..+..-   |+       ++++.+.--.|.++-+...+.....      ....
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~  175 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS  175 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence            457789999999877777777766666666542   32       4444444455666544322211111      1122


Q ss_pred             cCcccEEEEEe--CCCEEEEEeCCCcEEE--EECCCc---e-E----------------EEEEc-CCcccEEEEEeC--C
Q psy9182         355 GHRAAVNVVDF--DEKYIVSASGDRTIKV--WNTSSC---E-F----------------VRTLN-GHKRGIACLQYR--D  407 (486)
Q Consensus       355 ~~~~~v~~~~~--~~~~l~~~~~d~~i~i--wd~~~~---~-~----------------~~~~~-~~~~~v~~~~~~--~  407 (486)
                      .....|.++..  +|+.+++| .||.|+-  |....+   + +                +-.+. .+..+|..+..|  -
T Consensus       176 ~dg~~V~~I~~t~nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR  254 (1311)
T KOG1900|consen  176 VDGVSVNCITYTENGRIFFAG-RDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSR  254 (1311)
T ss_pred             cCCceEEEEEeccCCcEEEee-cCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecccc
Confidence            33566777776  56655555 5564432  222211   1 0                11222 456788999987  3


Q ss_pred             CEEEEEeCCCcEEEEECCC
Q psy9182         408 RLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~~  426 (486)
                      +.+.+-+..|+|.+||+..
T Consensus       255 ~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  255 NILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             ceeeeeccCceEEEEEccC
Confidence            5688889999999999975

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=86.85  E-value=25  Score=32.23  Aligned_cols=119  Identities=13%  Similarity=0.047  Sum_probs=69.2

Q ss_pred             CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEE-eCCCcEEEEECCC--CCce--eeEEeeecCcccEE--EEE
Q psy9182         294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTC-SKDRSIAVWDMVS--PNEI--TLRRVLVGHRAAVN--VVD  364 (486)
Q Consensus       294 g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~-~~dg~i~i~d~~~--~~~~--~~~~~~~~~~~~v~--~~~  364 (486)
                      |.|+.+|. .+..++.+..+-..-..++|+++  .++.+ +..+.|+-|++..  +...  ..........+..-  ++.
T Consensus       143 G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vD  221 (307)
T COG3386         143 GSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVD  221 (307)
T ss_pred             ceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEe
Confidence            33444443 45555555554555577888875  44444 4558888888762  1111  11111111223322  333


Q ss_pred             eCCCEEEEEeCCC-cEEEEECCCceEEEEEcCCcccEEEEEeCC---CEEEEEe
Q psy9182         365 FDEKYIVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYRD---RLVVSGS  414 (486)
Q Consensus       365 ~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~  414 (486)
                      -+|.+.+++..+| .|..|+.. ++++..+.-....+++++|.|   +.|.+.+
T Consensus       222 adG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         222 ADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            3677765554444 89999988 999999988878888888854   4444433

>KOG1900|consensus

Probab=86.60  E-value=46  Score=36.33  Aligned_cols=32  Identities=19%  Similarity=0.257  Sum_probs=26.3

Q ss_pred             ecCceeeecccccccceeeecCcccceeEEEe
Q psy9182         123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  154 (486)
Q Consensus       123 ~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~  154 (486)
                      +.|..+.+|+.+++.....+.+-...|..+..
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~L  127 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGL  127 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeee
Confidence            45789999999998888888887777877765

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=86.26  E-value=33  Score=32.99  Aligned_cols=177  Identities=12%  Similarity=0.083  Sum_probs=95.2

Q ss_pred             CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCC-----------------
Q psy9182         284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSP-----------------  344 (486)
Q Consensus       284 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~-----------------  344 (486)
                      ..++++-+.||.+.+++-+.......+.. .----.+.|.  .+.+++++.+..+..|....-                 
T Consensus       145 ~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~  223 (418)
T PF14727_consen  145 RDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKYQDLASASEASSRQSGTEQDI  223 (418)
T ss_pred             ceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecHHHhhhccccccccccccccc
Confidence            36788889999999999765544443332 1111223333  457888888888888865221                 


Q ss_pred             ---CceeeEEeeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe------CC---
Q psy9182         345 ---NEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY------RD---  407 (486)
Q Consensus       345 ---~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~------~~---  407 (486)
                         +.....-.+ .-...+..+..     ....+++-+ ...+.+.+. +|+.....+-.-.+.....+      .+   
T Consensus       224 ~~~k~l~~dWs~-nlGE~~l~i~v~~~~~~~~~IvvLg-er~Lf~l~~-~G~l~~~krLd~~p~~~~~Y~~~~~~~~~~~  300 (418)
T PF14727_consen  224 SSGKKLNPDWSF-NLGEQALDIQVVRFSSSESDIVVLG-ERSLFCLKD-NGSLRFQKRLDYNPSCFCPYRVPWYNEPSTR  300 (418)
T ss_pred             cccccccceeEE-ECCceeEEEEEEEcCCCCceEEEEe-cceEEEEcC-CCeEEEEEecCCceeeEEEEEeecccCCCCc
Confidence               100000000 01112222222     112233332 345666664 45444333322222222211      12   


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-----cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-----DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-----~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ..++.++.++++.||.=  .+.+..-+....+| ++..     -...|++-+.+|.+.+-=+-+.
T Consensus       301 ~~llV~t~t~~LlVy~d--~~L~WsA~l~~~PV-al~v~~~~~~~G~IV~Ls~~G~L~v~YLGTd  362 (418)
T PF14727_consen  301 LNLLVGTHTGTLLVYED--TTLVWSAQLPHVPV-ALSVANFNGLKGLIVSLSDEGQLSVSYLGTD  362 (418)
T ss_pred             eEEEEEecCCeEEEEeC--CeEEEecCCCCCCE-EEEecccCCCCceEEEEcCCCcEEEEEeCCC
Confidence            25889999999999974  45555555444444 3333     3567889999999999877664

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=86.14  E-value=2.5  Score=24.82  Aligned_cols=24  Identities=13%  Similarity=0.155  Sum_probs=14.9

Q ss_pred             EEEEcCCeEEEEeCCCcEEEEECC
Q psy9182         319 HLRFSNGMMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       319 ~~~~~~~~l~~~~~dg~i~i~d~~  342 (486)
                      .+...++.+++++.||.++.+|.+
T Consensus        16 ~~~v~~g~vyv~~~dg~l~ald~~   39 (40)
T PF13570_consen   16 SPAVAGGRVYVGTGDGNLYALDAA   39 (40)
T ss_dssp             --EECTSEEEEE-TTSEEEEEETT
T ss_pred             CCEEECCEEEEEcCCCEEEEEeCC
Confidence            345566777777777777777764

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=85.63  E-value=34  Score=32.62  Aligned_cols=162  Identities=14%  Similarity=0.073  Sum_probs=98.6

Q ss_pred             ccceEEEEeCCCEEEEEec---CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCcEE
Q psy9182         234 SKGVYCLQYDDHKIVSGLR---DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGEMV  307 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~~~  307 (486)
                      ...-+.++++++.+.++..   ++.+.+.|..+++.......-..+ ..+.+  +++.++... .++.|.+.|..+....
T Consensus       117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~  195 (381)
T COG3391         117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV  195 (381)
T ss_pred             CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence            3445667788877777665   689999999998888776543333 44554  777555554 7889999997766555


Q ss_pred             E-E----ecccCccEEEEEE--cCCeEEEEeCC---CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC-C
Q psy9182         308 N-T----LIHHCEAVLHLRF--SNGMMVTCSKD---RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG-D  376 (486)
Q Consensus       308 ~-~----~~~~~~~i~~~~~--~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-d  376 (486)
                      + .    ... ...-..+.+  .+..+.+....   +.+...|..++...............-..+.++|..+.+... .
T Consensus       196 ~~~~~~~~~~-~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~  274 (381)
T COG3391         196 RGSVGSLVGV-GTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQG  274 (381)
T ss_pred             cccccccccc-CCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCC
Confidence            3 1    111 111233344  34444443333   588888887765443211111112223345558888777744 4


Q ss_pred             CcEEEEECCCceEEEEEcCCc
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~  397 (486)
                      +.+.+-|..+...........
T Consensus       275 ~~V~vid~~~~~v~~~~~~~~  295 (381)
T COG3391         275 GTVSVIDGATDRVVKTGPTGN  295 (381)
T ss_pred             CeEEEEeCCCCceeeeecccc
Confidence            889999988887777665433

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=85.04  E-value=36  Score=32.38  Aligned_cols=54  Identities=6%  Similarity=0.071  Sum_probs=29.8

Q ss_pred             EEeCCCEEEEEeCCC----------------------cEEEEECCCceEE--EEEcCCcccEEEEEeCCCEEEEEeCC
Q psy9182         363 VDFDEKYIVSASGDR----------------------TIKVWNTSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSD  416 (486)
Q Consensus       363 ~~~~~~~l~~~~~d~----------------------~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d  416 (486)
                      ...++++++.|+.+.                      .+.+||+++.+-.  ..+........++..++.+++.|+..
T Consensus       276 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~~r~~~~av~~~~~iyv~GG~~  353 (376)
T PRK14131        276 GYSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNGKWQKVGELPQGLAYGVSVSWNNGVLLIGGET  353 (376)
T ss_pred             eeECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCCcccccCcCCCCccceEEEEeCCEEEEEcCCC
Confidence            344777777777531                      2457887765432  22222122234566677777777753

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=84.73  E-value=3.1  Score=24.42  Aligned_cols=24  Identities=17%  Similarity=0.256  Sum_probs=15.4

Q ss_pred             EEEecCCEEEEEeCCCcEEEEeCC
Q psy9182         442 CIRFDAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       442 ~~~~~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ++...+..++.++.||.|+.+|.+
T Consensus        16 ~~~v~~g~vyv~~~dg~l~ald~~   39 (40)
T PF13570_consen   16 SPAVAGGRVYVGTGDGNLYALDAA   39 (40)
T ss_dssp             --EECTSEEEEE-TTSEEEEEETT
T ss_pred             CCEEECCEEEEEcCCCEEEEEeCC
Confidence            345566777777778888877765

>KOG2063|consensus

Probab=83.73  E-value=63  Score=34.20  Aligned_cols=88  Identities=10%  Similarity=0.036  Sum_probs=45.0

Q ss_pred             CCCEEEEEeCCCcEEEEECCCceEE-E-EEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182         366 DEKYIVSASGDRTIKVWNTSSCEFV-R-TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI  443 (486)
Q Consensus       366 ~~~~l~~~~~d~~i~iwd~~~~~~~-~-~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  443 (486)
                      ++..++.| .|+...+-|.. |... . ++. -......+.+...|+++-+ ++.|.||+..++.+++++..-...-+-+
T Consensus       211 ~~~~ll~~-kd~~gv~vd~~-G~~~~~~~l~-ws~~P~~v~~~~PYlIa~~-~~~veI~s~~~~qlvQSI~~~~~~~~l~  286 (877)
T KOG2063|consen  211 DQSELLLG-KDNIGVVVDLN-GIIAQRGTLV-WSEVPLSVVVESPYLIALL-DRSVEIRSKLDGQLVQSITPLSNGRSLL  286 (877)
T ss_pred             CCceEEEc-cCceEEEEecC-CcccCCCceE-ecccchhhcccCceEEEEc-cccEEEEeccCHHHhhccccccccceee
Confidence            44455555 56666666643 3321 1 110 1112233344556666555 4599999999998888774222222222


Q ss_pred             EecCCEEEEEeCCC
Q psy9182         444 RFDAKRIVSGAYDG  457 (486)
Q Consensus       444 ~~~~~~l~s~~~dg  457 (486)
                      +.+.+.+++.+..+
T Consensus       287 s~~~~i~~~~~~s~  300 (877)
T KOG2063|consen  287 SAHNGIIFVASLSN  300 (877)
T ss_pred             ecCCcEEEEEeccc
Confidence            33445555555444

>PRK10115 protease 2; Provisional

Probab=83.49  E-value=61  Score=33.79  Aligned_cols=187  Identities=12%  Similarity=0.045  Sum_probs=84.3

Q ss_pred             EEEEeCCCEEEEEecC------CeEEEEECCCc--eeeEEEcCCcccEE--EEEe-cCCEEEEEeC---CCcEEEEECC-
Q psy9182         238 YCLQYDDHKIVSGLRD------NTIKVWDRVSL--QCIKVLTGHTGSVL--CLQY-DERVIISGSS---DSTVRVWDVN-  302 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~d------g~i~i~d~~~~--~~~~~~~~~~~~v~--~~~~-~~~~l~~~~~---dg~i~vwd~~-  302 (486)
                      .++.+|++.|+....+      ..|+.+++.++  +....+........  .... ++++++..+.   ++.+.+++.. 
T Consensus       177 ~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~  256 (686)
T PRK10115        177 FVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAEL  256 (686)
T ss_pred             EEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcC
Confidence            4555566555444322      35777777776  33333432222222  1222 6666554433   3568888842 


Q ss_pred             -CCcEEEEecccCccEEEEEEcCCeEEEEeCC----CcEEEEECCCCCceeeEEeeecC--cccEEEEEeCCC-EEEEEe
Q psy9182         303 -TGEMVNTLIHHCEAVLHLRFSNGMMVTCSKD----RSIAVWDMVSPNEITLRRVLVGH--RAAVNVVDFDEK-YIVSAS  374 (486)
Q Consensus       303 -~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~~~~-~l~~~~  374 (486)
                       +++....+.........+.-..+.++.-+..    ..|...++......   ..+..+  ...+..+.+.++ ++++..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~---~~l~~~~~~~~i~~~~~~~~~l~~~~~  333 (686)
T PRK10115        257 ADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDEQQW---EELIPPRENIMLEGFTLFTDWLVVEER  333 (686)
T ss_pred             CCCCceEEEECCCCCEEEEEeCCCEEEEEEcCCCCCceEEEecCCCcccC---eEEECCCCCCEEEEEEEECCEEEEEEE
Confidence             3433222222223333333223444333322    23444444422111   222233  336777777554 455555


Q ss_pred             CCCcEEE--EECCCceEEEEEc-CCcccEEEEEe----C-CCEEEEEeC---CCcEEEEECCCCe
Q psy9182         375 GDRTIKV--WNTSSCEFVRTLN-GHKRGIACLQY----R-DRLVVSGSS---DNTIRLWDIECGA  428 (486)
Q Consensus       375 ~d~~i~i--wd~~~~~~~~~~~-~~~~~v~~~~~----~-~~~l~~~~~---dg~v~iwd~~~~~  428 (486)
                      .++.-++  +|..++ .+..+. .....+..+..    + +.++++.++   -+.+..+|+.+++
T Consensus       334 ~~g~~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        334 QRGLTSLRQINRKTR-EVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             eCCEEEEEEEcCCCC-ceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence            5665444  454433 334433 22222222222    2 334444433   4778889988765

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=83.33  E-value=44  Score=32.01  Aligned_cols=100  Identities=13%  Similarity=0.205  Sum_probs=49.9

Q ss_pred             cCCeEEEEECCCceeeEEEcCCcc--cEEEEEe--c--CCE-EEEEeCCCcEEEEEC-CCCcE----EEEeccc------
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTG--SVLCLQY--D--ERV-IISGSSDSTVRVWDV-NTGEM----VNTLIHH------  313 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~--~v~~~~~--~--~~~-l~~~~~dg~i~vwd~-~~~~~----~~~~~~~------  313 (486)
                      ...++.+||+.+.+.++++.--..  ....+.|  +  ..+ ++.+...++|..|-- ..++-    +..+...      
T Consensus       220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~  299 (461)
T PF05694_consen  220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI  299 (461)
T ss_dssp             S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred             ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence            456899999999999999875432  3456666  3  233 333333444555433 44432    1122110      


Q ss_pred             -----------CccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEE
Q psy9182         314 -----------CEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRR  351 (486)
Q Consensus       314 -----------~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~  351 (486)
                                 ..-++.+..+-  .+|.+. =..|.|+.||+......++..
T Consensus       300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~g  351 (461)
T PF05694_consen  300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVG  351 (461)
T ss_dssp             --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEE
T ss_pred             ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEe
Confidence                       23467777763  355544 468999999999877655443

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=83.11  E-value=11  Score=38.16  Aligned_cols=29  Identities=21%  Similarity=0.650  Sum_probs=25.5

Q ss_pred             CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         366 DEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       366 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      +..++++.+.|+++++||+.+++++....
T Consensus       229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  229 DDTFLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             TTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            67899999999999999999999976653

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>KOG3616|consensus

Probab=83.02  E-value=36  Score=34.66  Aligned_cols=31  Identities=16%  Similarity=0.116  Sum_probs=26.1

Q ss_pred             ccccCCccCcceEEEeecCceeeeccccccc
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCE  137 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~  137 (486)
                      .+++...|.|+-++.+..||+|++++.....
T Consensus        17 ~~aiqshp~~~s~v~~~~d~si~lfn~~~r~   47 (1636)
T KOG3616|consen   17 TTAIQSHPGGQSFVLAHQDGSIILFNFIPRR   47 (1636)
T ss_pred             eeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence            4566677999999999999999999987554

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=82.48  E-value=4.1  Score=21.57  Aligned_cols=24  Identities=0%  Similarity=0.153  Sum_probs=14.4

Q ss_pred             cEEEEEEcCCeEEEEeCCCcEEEE
Q psy9182         316 AVLHLRFSNGMMVTCSKDRSIAVW  339 (486)
Q Consensus       316 ~i~~~~~~~~~l~~~~~dg~i~i~  339 (486)
                      .|.+++..++++++++..+.+++|
T Consensus         3 ~i~aia~g~~~vavaTS~~~lRif   26 (27)
T PF12341_consen    3 EIEAIAAGDSWVAVATSAGYLRIF   26 (27)
T ss_pred             eEEEEEccCCEEEEEeCCCeEEec
Confidence            355566666666666666666655

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>smart00564 PQQ beta-propeller repeat

Probab=82.47  E-value=4.8  Score=22.15  Aligned_cols=24  Identities=33%  Similarity=0.411  Sum_probs=14.7

Q ss_pred             EEEEEeCCCcEEEEECCCCeeeEE
Q psy9182         409 LVVSGSSDNTIRLWDIECGACLRV  432 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~~~~  432 (486)
                      .++.++.+|.+..+|.++|+.+..
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEEEE
Confidence            455566666666666666665543

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=82.36  E-value=4.2  Score=21.52  Aligned_cols=23  Identities=22%  Similarity=0.385  Sum_probs=10.9

Q ss_pred             EEEEEeCCCEEEEEeCCCcEEEE
Q psy9182         400 IACLQYRDRLVVSGSSDNTIRLW  422 (486)
Q Consensus       400 v~~~~~~~~~l~~~~~dg~v~iw  422 (486)
                      |.+++..+.+++++.+.+.+|+|
T Consensus         4 i~aia~g~~~vavaTS~~~lRif   26 (27)
T PF12341_consen    4 IEAIAAGDSWVAVATSAGYLRIF   26 (27)
T ss_pred             EEEEEccCCEEEEEeCCCeEEec
Confidence            34444444444444444444444

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>smart00564 PQQ beta-propeller repeat

Probab=82.00  E-value=4.3  Score=22.35  Aligned_cols=23  Identities=35%  Similarity=0.547  Sum_probs=13.1

Q ss_pred             EEEEEeCCCcEEEEECCCCcEEE
Q psy9182         286 VIISGSSDSTVRVWDVNTGEMVN  308 (486)
Q Consensus       286 ~l~~~~~dg~i~vwd~~~~~~~~  308 (486)
                      .+++++.+|.+..+|.++|+.+.
T Consensus         8 ~v~~~~~~g~l~a~d~~~G~~~W   30 (33)
T smart00564        8 TVYVGSTDGTLYALDAKTGEILW   30 (33)
T ss_pred             EEEEEcCCCEEEEEEcccCcEEE
Confidence            45555556666666665555544

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>KOG3522|consensus

Probab=81.83  E-value=10  Score=38.88  Aligned_cols=146  Identities=14%  Similarity=0.091  Sum_probs=82.9

Q ss_pred             CEEEEEecCCeEEEEECCCceeeEE----EcCCcccEEEEEecCCEEEEEeCCCcEEEEECCC-----CcEEEEecccCc
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCIKV----LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT-----GEMVNTLIHHCE  315 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-----~~~~~~~~~~~~  315 (486)
                      ..+..|+.++.+.++.-..+.....    .......+.++.+....+..|.-||++-.+--.-     +++...+.....
T Consensus       548 PTic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~Slgagl~dgt~a~y~rap~gSwd~ep~~~~~~g~l  627 (925)
T KOG3522|consen  548 PTICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSGSLGAGLIDGTLAVYGRAPSGSWDGEPNISIPTGSL  627 (925)
T ss_pred             CcccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhccccccccCccCCccccccCCCCCCCCCCCccccccCCc
Confidence            3467788899999987652222111    1223345666666555566666666665543211     112222233455


Q ss_pred             cEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCceEEE
Q psy9182         316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       316 ~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      ++...++..+.+ .++.+|.|.++...+............|...|+.+..-+ ...++-.....+++++.++.....
T Consensus       628 Pvrsla~~ed~~-was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtetl~hlq  703 (925)
T KOG3522|consen  628 PVRSLAFQEDFV-WASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTETLWHLQ  703 (925)
T ss_pred             cccchhhhhcee-eeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccccCCcc
Confidence            677777766654 457799999999877544333344456777888888833 333333333356666666544333

>KOG1916|consensus

Probab=80.75  E-value=1.7  Score=44.37  Aligned_cols=102  Identities=16%  Similarity=0.205  Sum_probs=63.0

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccE-------------EEEEecCCEEEEEeCCCcEEEEECC-----CC
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV-------------LCLQYDERVIISGSSDSTVRVWDVN-----TG  304 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v-------------~~~~~~~~~l~~~~~dg~i~vwd~~-----~~  304 (486)
                      +.-++..+..++.+++.++.+... ..+.+|...+             ..++.||..++.++.||.++.|.+.     ..
T Consensus       194 ~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~  272 (1283)
T KOG1916|consen  194 NKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVH  272 (1283)
T ss_pred             ccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccH
Confidence            556777888888888877655332 3334455443             3456689999999999998888653     23


Q ss_pred             cEEEEecccC-ccEEEEEEcCC-----------eEEEEe-CCCcEEEEECCCCC
Q psy9182         305 EMVNTLIHHC-EAVLHLRFSNG-----------MMVTCS-KDRSIAVWDMVSPN  345 (486)
Q Consensus       305 ~~~~~~~~~~-~~i~~~~~~~~-----------~l~~~~-~dg~i~i~d~~~~~  345 (486)
                      .+++..+.|. .+-.|..+.++           ++++++ .+..+++|....-+
T Consensus       273 rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~  326 (1283)
T KOG1916|consen  273 RCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQ  326 (1283)
T ss_pred             hhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchh
Confidence            4555566665 34444445432           334333 45678888765443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	486
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		1e-144
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		2e-46
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		2e-35
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		3e-29
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		1e-32
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		2e-18
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-32
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		3e-18
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-27
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-23
2gnq_A	336	Structure Of Wdr5 Length = 336		2e-27
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-23
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		4e-27
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-23
2h9l_A	329	Wdr5delta23 Length = 329		4e-27
2h9l_A	329	Wdr5delta23 Length = 329		2e-23
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		4e-27
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		3e-23
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		4e-27
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-23
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		5e-27
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-23
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		5e-27
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-23
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		5e-27
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		3e-23
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-27
2g99_A	308	Structural Basis For The Specific Recognition Of Me		3e-23
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		6e-27
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		3e-23
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		6e-27
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		3e-23
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		6e-27
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		3e-23
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		7e-27
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-23
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		7e-27
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		5e-23
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		8e-27
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-23
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		4e-26
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-23
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		4e-24
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		8e-14
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		6e-04
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		7e-23
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		7e-19
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		3e-14
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		2e-17
2p64_A	52	D Domain Of B-Trcp Length = 52		4e-17
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		4e-16
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		4e-16
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		5e-16
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		5e-08
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		5e-16
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		5e-08
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		9e-16
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		1e-15
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		3e-15
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		4e-15
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		1e-13
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		1e-14
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		1e-14
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		7e-14
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		8e-14
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		8e-14
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		8e-14
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		8e-14
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		3e-13
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		3e-13
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		3e-13
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		3e-13
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		3e-13
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		5e-13
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		7e-08
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		4e-12
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		9e-12
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-11
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		3e-07
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		1e-11
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		7e-11
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		7e-10
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		3e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		8e-10
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		9e-10
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		3e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		1e-09
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		1e-09
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		3e-09
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		4e-04
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		3e-09
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		8e-09
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		1e-08
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		4e-08
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		1e-07
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		1e-07
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		8e-06
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		1e-07
2pm9_A	416	Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O		1e-06
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		2e-06
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		3e-04
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-06
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		3e-06
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		3e-05
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		8e-04
3jzn_A	366	Structure Of Eed In Apo Form Length = 366		3e-05
3iiy_A	365	Crystal Structure Of Eed In Complex With A Trimethy		3e-05
3iiw_A	365	Crystal Structure Of Eed In Complex With A Trimethy		3e-05
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		3e-05
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		9e-04
1pgu_A	615	Yeast Actin Interacting Protein 1 (aip1), Se-met Pr		4e-05
1pgu_A	615	Yeast Actin Interacting Protein 1 (aip1), Se-met Pr		6e-05
1pi6_A	615	Yeast Actin Interacting Protein 1 (Aip1), Orthorhom		4e-05
1pi6_A	615	Yeast Actin Interacting Protein 1 (Aip1), Orthorhom		6e-05
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		5e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		4e-04
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		4e-04

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 243/271 (89%), Positives = 259/271 (95%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
           IE+NWR G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTG
Sbjct: 112 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG 171
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
           HTGSVLCLQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSK
Sbjct: 172 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK 231
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
           DRSIAVWDM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRT
Sbjct: 232 DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRT 291
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
           LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVS
Sbjct: 292 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS 351
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLV 483
           GAYDGKIKVW+LVAALDPRAP  TLCLRTLV
Sbjct: 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 382

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 194/390 (49%), Gaps = 40/390 (10%)
Query: 94  HINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ 153
           H+   ++P  QRDFISLLP     Y++S    + + +    +C + R L         L 
Sbjct: 5   HMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDL-LQAAQTCRYWRILAEDN-----LL 58
Query: 154 YRDRLVVSGSSDNT-IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQXXXXXXXXXXXXX 212
           +R++    G  +   I+ R   +                 +  +P +             
Sbjct: 59  WREKCKEEGIDEPLHIKRRKVIKP---------------GFIHSPWKSAYIRQHR----- 98
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
           I+ NWR G+    ++  +  +   + CLQ+  ++IVSG  DNT+KVW  V+ +C++ L G
Sbjct: 99  IDTNWRRGELKSPKV-LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG 157
Query: 273 HTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSK 332
           HTG V   Q  + +IISGS+D T++VW+  TGE ++TL  H   V  +      +V+ S+
Sbjct: 158 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSR 217
Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
           D ++ VWD+ +   +    VL+GH AAV  V +D + +VS + D  +KVW+  +   + T
Sbjct: 218 DATLRVWDIETGQCL---HVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 274
Query: 393 LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS 452
           L GH   +  LQ+    VVSGS D +IR+WD+E G C+  L GH+ L   +      +VS
Sbjct: 275 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVS 334
Query: 453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTL 482
           G  D  +K+W++          T  CL+TL
Sbjct: 335 GNADSTVKIWDI---------KTGQCLQTL 355

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 182/361 (50%), Gaps = 68/361 (18%)
Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
           D + I SAS D+T+K+WN  + + ++TL GH                 SS N + +R + 
Sbjct: 232 DGQTIASASDDKTVKLWN-RNGQLLQTLTGHS----------------SSVNGVAFRPDG 274
Query: 175 QIVSSSHDD-TILIWDFLNYSETPIQXXXXXXXXXXXXXIENNWRMGKFLLQRINCRSEN 233
           Q ++S+ DD T+ +W+                            R G+ LLQ +   S +
Sbjct: 275 QTIASASDDKTVKLWN----------------------------RNGQ-LLQTLTGHSSS 305
Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
             GV     D   I S   D T+K+W+R + Q ++ LTGH+ SV  + +  D + I S S
Sbjct: 306 VWGV-AFSPDGQTIASASDDKTVKLWNR-NGQHLQTLTGHSSSVWGVAFSPDGQTIASAS 363
Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDRSIAVWDMVSPNEITL 349
            D TV++W+ N G+++ TL  H  +V  + FS +G  + + S D+++ +W+        L
Sbjct: 364 DDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR----NGQL 418
Query: 350 RRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQ 404
            + L GH ++V  V F  D++ I SAS D+T+K+WN  + + ++TL GH    RG+A   
Sbjct: 419 LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVA-FS 476
Query: 405 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
              + + S S D T++LW+   G  L+ L GH   VR + F  D + I S + D  +K+W
Sbjct: 477 PDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535
Query: 463 N 463
           N
Sbjct: 536 N 536

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  126 bits (316), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 19/255 (7%)
Query: 219 MGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL 278
           MG     R+   S + +GV     D   I S   D T+K+W+R + Q ++ LTGH+ SV 
Sbjct: 4   MGVKERNRLEAHSSSVRGV-AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVW 61
Query: 279 CLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMV-TCSKDR 334
            + +  D + I S S D TV++W+ N G+++ TL  H  +V  + FS +G  + + S D+
Sbjct: 62  GVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 120
Query: 335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392
           ++ +W+        L + L GH ++V  V F  D + I SAS D+T+K+WN  + + ++T
Sbjct: 121 TVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQT 175
Query: 393 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK 448
           L GH   +  + +    + + S S D T++LW+   G  L+ L GH   VR + F  D +
Sbjct: 176 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQ 234
Query: 449 RIVSGAYDGKIKVWN 463
            I S + D  +K+WN
Sbjct: 235 TIASASDDKTVKLWN 249

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score =  137 bits (345), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 27/278 (9%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
           I  NW   KF+ QR   R   +  + CLQ++D+ +++G  D  I+V+D ++ + +  L+G
Sbjct: 101 ILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG 160
Query: 273 HTGSVLCLQYDE-RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL---RFSN-GMM 327
           H G V  L+Y    +++SGS+D TVRVWD+  G   +    H   V  L    + N   +
Sbjct: 161 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 220
Query: 328 VTCSKDRSIAVWDMVSPNEIT--------------------LRRVLVGHRAAVNVVDFDE 367
           VT S+D ++ VW +   + +                        VL GH A+V  V    
Sbjct: 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 280
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE 425
             +VS S D T+ VW+ +  + +  L+GH   I    Y    +  +S S D TIR+WD+E
Sbjct: 281 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340
Query: 426 CGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
            G  +  L+GH  LV  +R   K +VS A DG I+ W+
Sbjct: 341 NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWD 378

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 343 SPNEITLRRVLVGHRAAV-NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 401
           +P  +  R  L GH  +V   + F++ Y+++ + D+ I+V+++ + +F+  L+GH  G+ 
Sbjct: 107 NPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW 166
Query: 402 CLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DAKRIVSGAYD 456
            L+Y    ++VSGS+D T+R+WDI+ G C  V EGH   VRC+      + K IV+G+ D
Sbjct: 167 ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226
Query: 457 GKIKVWNL 464
             + VW L
Sbjct: 227 NTLHVWKL 234

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 136/278 (48%), Gaps = 27/278 (9%)
Query: 213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG 272
           I  NW   KF+ QR   R   +  + CLQ++D+ +++G  D  I+V+D ++ + +  L+G
Sbjct: 101 ILKNWYNPKFVPQRTTLRGHXTSVITCLQFEDNYVITGADDKXIRVYDSINKKFLLQLSG 160
Query: 273 HTGSVLCLQYDE-RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHL---RFSN-GMM 327
           H G V  L+Y    +++SGS+D TVRVWD+  G   +    H   V  L    + N   +
Sbjct: 161 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 220
Query: 328 VTCSKDRSIAVWDMVSPNEIT--------------------LRRVLVGHRAAVNVVDFDE 367
           VT S+D ++ VW +   + +                        VL GH A+V  V    
Sbjct: 221 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHXASVRTVSGHG 280
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE 425
             +VS S D T+ VW+ +  + +  L+GH   I    Y    +  +S S D TIR+WD+E
Sbjct: 281 NIVVSGSYDNTLIVWDVAQXKCLYILSGHTDRIYSTIYDHERKRCISASXDTTIRIWDLE 340
Query: 426 CGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
            G     L+GH  LV  +R   K +VS A DG I+ W+
Sbjct: 341 NGELXYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWD 378

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 343 SPNEITLRRVLVGHRAAV-NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 401
           +P  +  R  L GH  +V   + F++ Y+++ + D+ I+V+++ + +F+  L+GH  G+ 
Sbjct: 107 NPKFVPQRTTLRGHXTSVITCLQFEDNYVITGADDKXIRVYDSINKKFLLQLSGHDGGVW 166
Query: 402 CLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DAKRIVSGAYD 456
            L+Y    ++VSGS+D T+R+WDI+ G C  V EGH   VRC+      + K IV+G+ D
Sbjct: 167 ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226
Query: 457 GKIKVWNL 464
             + VW L
Sbjct: 227 NTLHVWKL 234

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 98  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 215
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 40  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 96
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 97  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 156
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 157 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 207
Query: 481 TLV 483
           TL+
Sbjct: 208 TLI 210

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 100 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 159
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 160 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 217
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 218 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 277
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 278 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 332

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 42  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 98
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 99  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 158
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 159 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 209
Query: 481 TLV 483
           TL+
Sbjct: 210 TLI 212

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 82  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 141
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 142 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 199
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 200 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 259
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 260 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 314

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 24  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 80
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 81  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 140
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 141 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 191
Query: 481 TLV 483
           TL+
Sbjct: 192 TLI 194

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 93  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 152
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 153 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 210
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 211 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 270
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 271 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 325

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 35  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 91
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 92  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 151
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 152 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 202
Query: 481 TLV 483
           TL+
Sbjct: 203 TLI 205

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 76  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 193
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 253
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 254 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 18  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 74
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 75  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 185
Query: 481 TLV 483
           TL+
Sbjct: 186 TLI 188

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 82  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 141
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 142 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 199
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 200 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 259
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 260 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 314

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 24  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 80
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 81  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 140
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 141 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 191
Query: 481 TLV 483
           TL+
Sbjct: 192 TLI 194

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 76  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 193
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 253
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 254 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 282

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 18  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 74
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 75  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 185
Query: 481 TLV 483
           TL+
Sbjct: 186 TLI 188

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 77  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 136
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 137 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 194
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 195 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 254
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 255 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 283

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 19  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 75
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 76  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 135
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 136 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 186
Query: 481 TLV 483
           TL+
Sbjct: 187 TLI 189

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 81  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 140
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 141 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 198
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 199 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 258
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 259 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 287

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 23  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 79
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 80  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 139
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 140 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 190
Query: 481 TLV 483
           TL+
Sbjct: 191 TLI 193

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score =  119 bits (297), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 72  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 189
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 190 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 249
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 250 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 14  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 70
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 71  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 131 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 181
Query: 481 TLV 483
           TL+
Sbjct: 182 TLI 184

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 75  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 134
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 135 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 192
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 193 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 252
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 253 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 281

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 17  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 73
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 74  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 133
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 134 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 184
Query: 481 TLV 483
           TL+
Sbjct: 185 TLI 187

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 82  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 141
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 142 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 199
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 200 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 259
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 260 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 288

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 24  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 80
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 81  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 140
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 141 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 191
Query: 481 TLV 483
           TL+
Sbjct: 192 TLI 194

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 139 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 196
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 256
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 257 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 285

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 77
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 78  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 137
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 138 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 188
Query: 481 TLV 483
           TL+
Sbjct: 189 TLI 191

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 139 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 196
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 256
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 257 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 285

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 77
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 78  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 137
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 138 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 188
Query: 481 TLV 483
           TL+
Sbjct: 189 TLI 191

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 13/209 (6%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG+ + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 139 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 196
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 256
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELV 440
           SGS DN + +W+++    ++ L+GH ++V
Sbjct: 257 SGSEDNLVYIWNLQTKEIVQKLQGHTDVV 285

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 20/183 (10%)
Query: 309 TLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF- 365
           TL  H +AV  ++FS NG  +   S D+ I +W      +    + + GH+  ++ V + 
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAY---DGKFEKTISGHKLGISDVAWS 77
Query: 366 -DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLW 422
            D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++R+W
Sbjct: 78  SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 137
Query: 423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTLCLR 480
           D++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           CL+
Sbjct: 138 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------QCLK 188
Query: 481 TLV 483
           TL+
Sbjct: 189 TLI 191

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 126/235 (53%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG  + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 139 VKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 196
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D T+K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 197 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 256
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 257 SGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 311

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 306 MVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
           ++ TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V
Sbjct: 18  LMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDV 74
Query: 364 DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 419
            +  D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++
Sbjct: 75  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 134
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTL 477
           R+WD++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           
Sbjct: 135 RIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------Q 185
Query: 478 CLRTLV 483
           CL+TL+
Sbjct: 186 CLKTLI 191

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 125/235 (53%), Gaps = 17/235 (7%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER--VIISGSSDSTVRVWD 300
           D + +VS   D T+K+WD  S +C+K L GH+  V C  ++ +  +I+SGS D +VR+WD
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 301 VNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
           V TG  + TL  H + V  +H      ++V+ S D    +WD  S     L+ ++     
Sbjct: 139 VKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNP 196
Query: 359 AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-----DRLVV 411
            V+ V F  + KYI++A+ D  +K+W+ S  + ++T  GHK    C+         + +V
Sbjct: 197 PVSFVKFSPNGKYILAATLDNDLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 256
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAY---DGKIKVW 462
           SGS DN + +W+++    ++ L+GH ++V        + I++ A    D  IK+W
Sbjct: 257 SGSEDNMVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 311

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 306 MVNTLIHHCEAVLHLRFS-NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
           ++ TL  H +AV  ++FS NG  + + S D+ I +W      +    + + GH+  ++ V
Sbjct: 18  LMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFEKTISGHKLGISDV 74
Query: 364 DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 419
            +  D   +VSAS D+T+K+W+ SS + ++TL GH   + C  +  +  L+VSGS D ++
Sbjct: 75  AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 134
Query: 420 RLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRAPTTTL 477
           R+WD++ G CL+ L  H + V  + F  D   IVS +YDG  ++W+  +           
Sbjct: 135 RIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG---------Q 185
Query: 478 CLRTLV 483
           CL+TL+
Sbjct: 186 CLKTLI 191

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 119/234 (50%), Gaps = 17/234 (7%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVW 299
           IVS  RD +I +W     D+      + LTGH+  V  + L  D +  +SGS D  +R+W
Sbjct: 398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
           D+  G      + H + VL + FS  N  +V+ S+DR+I +W+ +   + T+     GHR
Sbjct: 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHR 517
Query: 358 AAVNVVDFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVV 411
             V+ V F     +  IVSAS D+T+KVWN S+C+   TL GH   ++ +       L  
Sbjct: 518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCA 577
Query: 412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNL 464
           SG  D  + LWD+  G  L  LE +  ++  + F   R  +  A +  IK+W+L
Sbjct: 578 SGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRYWLCAATEHGIKIWDL 630

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 326 MMVTCSKDRSIAVWDMVSPNEI--TLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKV 381
           ++V+ S+D+SI +W +   ++     +R L GH   V   V+  D ++ +S S D  +++
Sbjct: 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456
Query: 382 WNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL----EG 435
           W+ ++    R   GH + +  + +   +R +VS S D TI+LW+   G C   +    EG
Sbjct: 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGECKYTISEGGEG 515
Query: 436 HEELVRCIRFDAK----RIVSGAYDGKIKVWNL 464
           H + V C+RF        IVS ++D  +KVWNL
Sbjct: 516 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 548

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 409 LVVSGSSDNTIRLW-----DIECGACLRVLEGHEELVR--CIRFDAKRIVSGAYDGKIKV 461
           ++VS S D +I LW     D   G   R L GH   V    +  D +  +SG++DG++++
Sbjct: 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456
Query: 462 WNLVAALDPR 471
           W+L A +  R
Sbjct: 457 WDLAAGVSTR 466

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG 304
           +VS   D TIKVWD  +    + L GHT SV  + +D   +++ S S+D T+++WD    
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 305 EMVNTLIHHCEAVLHLR-FSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV 362
           E + T+  H   V  +    NG  +V+ S+D++I +W++ +   +   +   GHR  V +
Sbjct: 183 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRM 239
Query: 363 V--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR------------ 408
           V  + D   I S S D+T++VW  ++ E    L  H+  + C+ +               
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 299
Query: 409 ----------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD 456
                      ++SGS D TI++WD+  G CL  L GH+  VR + F    K I+S A D
Sbjct: 300 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
Query: 457 GKIKVWN 463
             ++VW+
Sbjct: 360 KTLRVWD 366

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 46/279 (16%)
Query: 225 QRINCRSENSKGVY----CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
           + +N  S  S  +Y    C   D   + +G  D  I++WD  + + + +L GH   +  L
Sbjct: 112 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 171
Query: 281 QY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNGMMVTC-SKDRSI 336
            Y      ++SGS D TVR+WD+ TG+   TL I      + +   +G  +   S DR++
Sbjct: 172 DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAV 231
Query: 337 AVWDMVSPNEITLRRV------LVGHRAAVNVVDF--DEKYIVSASGDRTIKVW------ 382
            VWD  S     + R+        GH+ +V  V F  D + +VS S DR++K+W      
Sbjct: 232 RVWD--SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289
Query: 383 --------NTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 431
                   N+ +CE   T  GHK     +A  Q  D  ++SGS D  +  WD + G  L 
Sbjct: 290 NKSDSKTPNSGTCEV--TYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLL 346
Query: 432 VLEGHEELVRCIRF--------DAKRIVSGAYDGKIKVW 462
           +L+GH   V  +          +     +G+ D K ++W
Sbjct: 347 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 385

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 42/249 (16%)
Query: 273 HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV------------- 317
           HT  V C+++  D   + +G  + T +V+ V+ G +V  L     A              
Sbjct: 63  HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 121
Query: 318 --LHLR---FS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK 368
             L++R   FS     + T ++DR I +WD +   +I +  +L GH   +  +D+     
Sbjct: 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWD-IENRKIVM--ILQGHEQDIYSLDYFPSGD 178
Query: 369 YIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426
            +VS SGDRT+++W+  T  C    ++      +A      + + +GS D  +R+WD E 
Sbjct: 179 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET 238
Query: 427 GACLRVLE-------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA---LDPRAPT 474
           G  +  L+       GH++ V  + F  D + +VSG+ D  +K+WNL  A    D + P 
Sbjct: 239 GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298
Query: 475 TTLCLRTLV 483
           +  C  T +
Sbjct: 299 SGTCEVTYI 307

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 111/223 (49%), Gaps = 22/223 (9%)
Query: 264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLR 321
           L C + L GH+G V  L +  ++  I+S S D  + VW+  T +  + +  HC  V+   
Sbjct: 56  LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECA 115
Query: 322 FS-NGMMVTCSK-DRSIAVWDMVSP----NEITLRRVLVGHRAAVNVVDF---DEKYIVS 372
           F+ NG  V C   D + +++++ S       + + RVL GH+   +   +    E  +++
Sbjct: 116 FAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLIT 175
Query: 373 ASGDRTIKVWNTSSCEFVRTL-----NGHKRGIACLQYRD---RLVVSGSSDNTIRLWDI 424
            SGD+T  +W+ ++ + +        +GH   +  L        + +SGS D T+RLWD+
Sbjct: 176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDL 235
Query: 425 ECGA-CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
              +  +R   GHE  +  ++F  D +R  +G+ DG  +++++
Sbjct: 236 RITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDM 278

>pdb|2P64|A Chain A, D Domain Of B-Trcp Length = 52

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 54  APQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQ 104
           A  +  EKE+C KYF++WSE DQ++FVE+L+S+ CHYQHGHIN+YLKP LQ
Sbjct: 2   AASYEKEKELCVKYFEQWSESDQVEFVEHLISQXCHYQHGHINSYLKPXLQ 52

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 27/248 (10%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
           +  D    +SG  D T+++WD  +    +   GHT  VL + +  D R I+SGS D T++
Sbjct: 94  ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153
Query: 298 VWDVNTGEMVNTLIH---HCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
           +W  NT  +    +    H E V  +RF    SN ++V+C  D+ + VW++ +     L+
Sbjct: 154 LW--NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLK 208
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR 408
              +GH   +N V       + ASG  D    +W+ +  + + TL+G     A     +R
Sbjct: 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLE-------GHEELVRCIRF----DAKRIVSGAYDG 457
             +  ++  +I++WD+E    +  L+          E  +C       D + + +G  D 
Sbjct: 269 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328
Query: 458 KIKVWNLV 465
            ++VW + 
Sbjct: 329 LVRVWQVT 336

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 27/248 (10%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
           +  D    +SG  D T+++WD  +    +   GHT  VL + +  D R I+SGS D T++
Sbjct: 71  ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 298 VWDVNTGEMVNTLIH---HCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEITLR 350
           +W  NT  +    +    H E V  +RF    SN ++V+C  D+ + VW++ +     L+
Sbjct: 131 LW--NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---CKLK 185
Query: 351 RVLVGHRAAVNVVDFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR 408
              +GH   +N V       + ASG  D    +W+ +  + + TL+G     A     +R
Sbjct: 186 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 409 LVVSGSSDNTIRLWDIECGACLRVLE-------GHEELVRCIRF----DAKRIVSGAYDG 457
             +  ++  +I++WD+E    +  L+          E  +C       D + + +G  D 
Sbjct: 246 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 305
Query: 458 KIKVWNLV 465
            ++VW + 
Sbjct: 306 LVRVWQVT 313

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 16/190 (8%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSP 344
           II GS D  +RV++ NTGE V     H + +  + +  +   +++ S D ++ +W+    
Sbjct: 70  IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW--E 127
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWN--TSSCEFVRTLNGHKRG 399
           N   L +   GH   V  V F+ K      S   DRT+KVW+   S+  F  T  G +RG
Sbjct: 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERG 186
Query: 400 IACLQYR----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSG 453
           +  + Y        +++ S D TI++WD +  +C+  LEGH   V    F      I+SG
Sbjct: 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246
Query: 454 AYDGKIKVWN 463
           + DG +K+WN
Sbjct: 247 SEDGTLKIWN 256

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRLWD 423
           + +I+  S D  I+V+N ++ E V     H    R IA    +   V+SGS D T++LW+
Sbjct: 67  KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWN 125
Query: 424 IECGACL-RVLEGHEELVRCIRFDAK---RIVSGAYDGKIKVWNL 464
            E    L +  EGHE  V C+ F+ K      SG  D  +KVW+L
Sbjct: 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 16/190 (8%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--LHLRFSNGMMVTCSKDRSIAVWDMVSP 344
           II GS D  +RV++ NTGE V     H + +  + +  +   +++ S D ++ +W+    
Sbjct: 70  IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW--E 127
Query: 345 NEITLRRVLVGHRAAVNVVDFDEK---YIVSASGDRTIKVWN--TSSCEFVRTLNGHKRG 399
           N   L +   GH   V  V F+ K      S   DRT+KVW+   S+  F  T  G +RG
Sbjct: 128 NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERG 186
Query: 400 IACLQYR----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR--IVSG 453
           +  + Y        +++ S D TI++WD +  +C+  LEGH   V    F      I+SG
Sbjct: 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246
Query: 454 AYDGKIKVWN 463
           + DG +K+WN
Sbjct: 247 SEDGTLKIWN 256

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRLWD 423
           + +I+  S D  I+V+N ++ E V     H    R IA    +   V+SGS D T++LW+
Sbjct: 67  KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWN 125
Query: 424 IECGACL-RVLEGHEELVRCIRFDAK---RIVSGAYDGKIKVWNL 464
            E    L +  EGHE  V C+ F+ K      SG  D  +KVW+L
Sbjct: 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWD-VNT 303
           I+ G  D  I+V++  + + +     H   +  + +   +  ++SGS D TV++W+  N 
Sbjct: 70  IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129
Query: 304 GEMVNTLIHHCEAVLHLRFSNGMMVTCSK---DRSIAVWDM--VSPNEITLRRVLVGHRA 358
             +  T   H   V+ + F+     T +    DR++ VW +   +PN  TL     G   
Sbjct: 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-FTLT---TGQER 185
Query: 359 AVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVS 412
            VN VD+    D+ Y+++AS D TIK+W+  +   V TL GH   ++   +   L  ++S
Sbjct: 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA---KRIVSGAYDGKIKVWNL----- 464
           GS D T+++W+       + L    E   CI       K  ++  +D    V +L     
Sbjct: 246 GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305
Query: 465 VAALDP 470
             +LDP
Sbjct: 306 TLSLDP 311

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYDERVIISGSSDSTVRVWD-VNT 303
           I+ G  D  I+V++  + + +     H   +  + +   +  ++SGS D TV++W+  N 
Sbjct: 70  IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129
Query: 304 GEMVNTLIHHCEAVLHLRFSNGMMVTCSK---DRSIAVWDM--VSPNEITLRRVLVGHRA 358
             +  T   H   V+ + F+     T +    DR++ VW +   +PN  TL     G   
Sbjct: 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN-FTLT---TGQER 185
Query: 359 AVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRL--VVS 412
            VN VD+    D+ Y+++AS D TIK+W+  +   V TL GH   ++   +   L  ++S
Sbjct: 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA---KRIVSGAYDGKIKVWNL----- 464
           GS D T+++W+       + L    E   CI       K  ++  +D    V +L     
Sbjct: 246 GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305
Query: 465 VAALDP 470
             +LDP
Sbjct: 306 TLSLDP 311

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 22/231 (9%)
Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTG--SVLCLQYDERVIISGSSDSTVR---VWD 300
           K+ S  RD T+++W +       V+    G  + +C   ++ +++ G  D+ +    ++ 
Sbjct: 31  KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTXINGVPLFA 90
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
            +  + + TLI H   V  L F +G++++ S D++  VW      E +L   L  H A+V
Sbjct: 91  TSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVW-----KEGSLVYNLQAHNASV 145
Query: 361 ---NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HK---RGIACLQYRDRLVVSG 413
               VV F E   ++AS D+TIK+W     + ++T +G H    R +A +   D   +S 
Sbjct: 146 WDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVD--DGHFISC 201
Query: 414 SSDNTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAYDGKIKVWN 463
           S+D  I+L D   G  LR  EGHE  V CI+      IVS   D  +++W+
Sbjct: 202 SNDGLIKLVDXHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWS 252

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 239  CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTV 296
            CL      +  G  D  IK+ +  + +      GH  +V  +Q+  D + +IS S DS +
Sbjct: 975  CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVI 1034
Query: 297  RVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
            +VW+  TG+ V  L  H E V   R   +  +++ S D ++ VW++++     + R    
Sbjct: 1035 QVWNWQTGDYV-FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR---IERDFTC 1090
Query: 356  HRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVV 411
            H+  V    +  D     S S D+T K+W+      +  L GH   + C  +     L+ 
Sbjct: 1091 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1150
Query: 412  SGSSDNTIRLWDIECG------ACLRVLEG---HEELVR--CIRFDAKRIVSGAYDGKIK 460
            +G  +  IR+W++  G      A + V EG   H   V   C   D+K +VS    G +K
Sbjct: 1151 TGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLK 1208
Query: 461  VWNLVAA 467
             WN+   
Sbjct: 1209 WWNVATG 1215

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 239  CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTV 296
            CL      +  G  D  IK+ +  + +      GH  +V  +Q+  D + +IS S DS +
Sbjct: 968  CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVI 1027
Query: 297  RVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
            +VW+  TG+ V  L  H E V   R   +  +++ S D ++ VW++++     + R    
Sbjct: 1028 QVWNWQTGDYV-FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR---IERDFTC 1083
Query: 356  HRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVV 411
            H+  V    +  D     S S D+T K+W+      +  L GH   + C  +     L+ 
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1143
Query: 412  SGSSDNTIRLWDIECG------ACLRVLEG---HEELVR--CIRFDAKRIVSGAYDGKIK 460
            +G  +  IR+W++  G      A + V EG   H   V   C   D+K +VS    G +K
Sbjct: 1144 TGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLK 1201
Query: 461  VWNLVAA 467
             WN+   
Sbjct: 1202 WWNVATG 1208

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
           N I    R+ ++  + L GH   +  + +  D R+++S S D  + +WD  T   V+ + 
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 312 HHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DE 367
                V+   ++ +G  V C   D   +++++ +    + + R L GH   ++   F D+
Sbjct: 95  LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425
             IV++SGD T  +W+  + +   T  GH   +  L      RL VSG+ D + +LWD+ 
Sbjct: 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 426 CGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
            G C +   GHE  +  I F  +     +G+ D   ++++L A
Sbjct: 215 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
           N I    R+ ++  + L GH   +  + +  D R+++S S D  + +WD  T   V+ + 
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Query: 312 HHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DE 367
                V+   ++ +G  V C   D   +++++ +    + + R L GH   ++   F D+
Sbjct: 95  LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425
             IV++SGD T  +W+  + +   T  GH   +  L      RL VSG+ D + +LWD+ 
Sbjct: 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 426 CGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
            G C +   GHE  +  I F  +     +G+ D   ++++L A
Sbjct: 215 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
           N I    R+ ++  + L GH   +  + +  D R+++S S D  + +WD  T   V+ + 
Sbjct: 46  NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP 105
Query: 312 HHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DE 367
                V+   ++ +G  V C   D   +++++ +    + + R L GH   ++   F D+
Sbjct: 106 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 165
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425
             IV++SGD T  +W+  + +   T  GH   +  L      RL VSG+ D + +LWD+ 
Sbjct: 166 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 225
Query: 426 CGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
            G C +   GHE  +  I F  +     +G+ D   ++++L A
Sbjct: 226 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 268

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
           N I    R+ ++  + L GH   +  + +  D R+++S S D  + +WD  T   V+ + 
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP 94
Query: 312 HHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DE 367
                V+   ++ +G  V C   D   +++++ +    + + R L GH   ++   F D+
Sbjct: 95  LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425
             IV++SGD T  +W+  + +   T  GH   +  L      RL VSG+ D + +LWD+ 
Sbjct: 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 426 CGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
            G C +   GHE  +  I F  +     +G+ D   ++++L A
Sbjct: 215 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI 311
           N I    R+ ++  + L GH   +  + +  D R+++S S D  + +WD  T   V+ + 
Sbjct: 35  NNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP 94
Query: 312 HHCEAVLHLRFS-NGMMVTCSK-DRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DE 367
                V+   ++ +G  V C   D   +++++ +    + + R L GH   ++   F D+
Sbjct: 95  LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154
Query: 368 KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE 425
             IV++SGD T  +W+  + +   T  GH   +  L      RL VSG+ D + +LWD+ 
Sbjct: 155 NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214
Query: 426 CGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA 466
            G C +   GHE  +  I F  +     +G+ D   ++++L A
Sbjct: 215 EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVW 299
           ++S  RD T+  W     D+     ++   GH+  V    L  D    +S S D T+R+W
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
           DV TGE     + H   V+ +       M+++ S+D++I VW +      T    L+GH 
Sbjct: 93  DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLAT----LLGHN 148
Query: 358 AAVNVV--------DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D 407
             V+ V        D D   I+SA  D+ +K WN +  +      GH   I  L      
Sbjct: 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVA 466
            L+ S   D  I LW++     +  L   +E V  + F   R  ++ A    IKV+    
Sbjct: 209 TLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATGIKVF---- 263
Query: 467 ALDPR 471
           +LDP+
Sbjct: 264 SLDPQ 268

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVW 299
           ++S  RD T+  W     D+     ++   GH+  V    L  D    +S S D T+R+W
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
           DV TGE     + H   V+ +       M+++ S+D++I VW +      T    L+GH 
Sbjct: 93  DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLAT----LLGHN 148
Query: 358 AAVNVV--------DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D 407
             V+ V        D D   I+SA  D+ +K WN +  +      GH   I  L      
Sbjct: 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVA 466
            L+ S   D  I LW++     +  L   +E V  + F   R  ++ A    IKV+    
Sbjct: 209 TLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATGIKVF---- 263
Query: 467 ALDPR 471
           +LDP+
Sbjct: 264 SLDPQ 268

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVW 299
           ++S  RD T+  W     D+     ++   GH+  V    L  D    +S S D T+R+W
Sbjct: 27  LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 86
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
           DV TGE     + H   V+ +       M+++ S+D++I VW +      T    L+GH 
Sbjct: 87  DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLAT----LLGHN 142
Query: 358 AAVNVV--------DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D 407
             V+ V        D D   I+SA  D+ +K WN +  +      GH   I  L      
Sbjct: 143 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 202
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVA 466
            L+ S   D  I LW++     +  L   +E V  + F   R  ++ A    IKV+    
Sbjct: 203 TLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATGIKVF---- 257
Query: 467 ALDPR 471
           +LDP+
Sbjct: 258 SLDPQ 262

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVW 299
           ++S  RD T+  W     D+     ++   GH+  V    L  D    +S S D T+R+W
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
           DV TGE     + H   V+ +       M+++ S+D++I VW +      T    L+GH 
Sbjct: 93  DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLAT----LLGHN 148
Query: 358 AAVNVV--------DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D 407
             V+ V        D D   I+SA  D+ +K WN +  +      GH   I  L      
Sbjct: 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVA 466
            L+ S   D  I LW++     +  L   +E V  + F   R  ++ A    IKV+    
Sbjct: 209 TLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATGIKVF---- 263
Query: 467 ALDPR 471
           +LDP+
Sbjct: 264 SLDPQ 268

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 247 IVSGLRDNTIKVW-----DRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVW 299
           ++S  RD T+  W     D+     ++   GH+  V    L  D    +S S D T+R+W
Sbjct: 33  LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLW 92
Query: 300 DVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR 357
           DV TGE     + H   V+ +       M+++ S+D++I VW +      T    L+GH 
Sbjct: 93  DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLAT----LLGHN 148
Query: 358 AAVNVV--------DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D 407
             V+ V        D D   I+SA  D+ +K WN +  +      GH   I  L      
Sbjct: 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208
Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVA 466
            L+ S   D  I LW++     +  L   +E V  + F   R  ++ A    IKV+    
Sbjct: 209 TLIASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATATGIKVF---- 263
Query: 467 ALDPR 471
           +LDP+
Sbjct: 264 SLDPQ 268

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 137/363 (37%), Gaps = 107/363 (29%)
Query: 140 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWD-FLNYSETPI 198
           RTL GH   + C+ +                +D+ +IVSSS D  +++WD F    E  +
Sbjct: 58  RTLKGHGNKVLCMDW---------------CKDKRRIVSSSQDGKVIVWDSFTTNKEHAV 102
Query: 199 QXXXXXXXXXXXXXIENNWRMGKFLLQR---INCRS-ENSKGVYCLQYD----------- 243
                         +   W M          I C   +N   VY L +D           
Sbjct: 103 -------------TMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKS 149
Query: 244 ----------------DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY----D 283
                           D +I++   D T  +WD  S Q ++   GH   VLCL       
Sbjct: 150 VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSET 209
Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDM 341
               +SG  D    VWD+ +G+ V     H   V  +R+  S     + S D +  ++D+
Sbjct: 210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 269
Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA 401
            +  E+ +               + ++ I+          +  SS +F  +L+G      
Sbjct: 270 RADREVAI---------------YSKESII----------FGASSVDF--SLSG------ 296
Query: 402 CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKI 459
                 RL+ +G +D TI +WD+  G+ + +L GHE  V  +R   D     SG++D  +
Sbjct: 297 ------RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL 350
Query: 460 KVW 462
           +VW
Sbjct: 351 RVW 353

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 43/205 (20%)
Query: 268 KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-N 324
           + L GH   VLC+ +  D+R I+S S D  V VWD  T    + +   C  V+   ++ +
Sbjct: 58  RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS 117
Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN- 383
           G  + C                       + ++ +V  + FD+   ++A         N 
Sbjct: 118 GCAIACGG---------------------LDNKCSVYPLTFDKNENMAAKKKSVAMHTNY 156
Query: 384 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
            S+C F  +              D  +++ S D T  LWD+E G  L+   GH   V C+
Sbjct: 157 LSACSFTNS--------------DMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCL 202
Query: 444 RF----DAKRIVSGAYDGKIKVWNL 464
                      VSG  D K  VW++
Sbjct: 203 DLAPSETGNTFVSGGCDKKAMVWDM 227

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 25/245 (10%)
Query: 240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVR 297
           L  + +  VS   D+++++W+  + QC     GHT  VL + +  D R I+SG  D+ +R
Sbjct: 75  LSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALR 134
Query: 298 VWDVNTGEMVNTLIH--HCEAVLHLRFSNGM----MVTCSKDRSIAVWDMVSPNEITLRR 351
           VW+V  GE ++TL    H + V  +RFS  +    +V+   D  + VWD+ +   +T   
Sbjct: 135 VWNVK-GECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVT--- 190
Query: 352 VLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDR 408
            L GH   V    V  D     S+  D   ++W+ +  E +  +  G      C    +R
Sbjct: 191 DLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFS-PNR 249
Query: 409 LVVSGSSDNTIRLWDIECGACLRVL----EGHEELV-RCIRF----DAKRIVSGAYDGKI 459
             +  +++  IR++D+E    +  L    +G +++V  C+      D   + SG  D  I
Sbjct: 250 YWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYSGYTDNVI 309
Query: 460 KVWNL 464
           +VW +
Sbjct: 310 RVWGV 314

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 33/240 (13%)
Query: 270 LTGHTG---SVLCLQYDERV--IISGSSDSTVRVWDVNT---------GEMVNTLIHHCE 315
           LTGH G   S+ C Q  E    ++S S D T+  W  N          G     L  H  
Sbjct: 9   LTGHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSA 68
Query: 316 AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
            V  +  SN     V+ S D S+ +W++ +      +   +GH   V  V F  D + IV
Sbjct: 69  FVSDVALSNNGNFAVSASWDHSLRLWNLQNGQ---CQYKFLGHTKDVLSVAFSPDNRQIV 125
Query: 372 SASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRL----VVSGSSDNTIRLWDIEC 426
           S   D  ++VWN    C    +   H   ++C+++   L    +VSG  DN +++WD+  
Sbjct: 126 SGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLAT 185
Query: 427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL-----VAALDPRAPTTTLCL 479
           G  +  L+GH   V  +    D     S   DG  ++W+L     ++ +   AP   +C 
Sbjct: 186 GRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICF 245

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 28/252 (11%)
Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERV--IISGSSDSTV 296
            L  D    +S   D T+++WD  + +  +   GH   V  +  D++   IISGS D T+
Sbjct: 72  TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTI 131
Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRF--------SNGMMVTCSKDRSIAVWDMVSPNEIT 348
           +VW +  G+ + TL+ H + V  +R          +  +++   D+ +  W++   N+  
Sbjct: 132 KVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKAWNL---NQFQ 187
Query: 349 LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR 406
           +    +GH + +N +    D   I SA  D  I +WN ++ +   TL+      +     
Sbjct: 188 IEADFIGHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTLSAQDEVFSLAFSP 247
Query: 407 DRLVVSGSSDNTIRLWDI-----------ECGACLRVLEGHEELVRCIRFDAKRIVSGAY 455
           +R  ++ ++   I+++ +           E     +  E H  +      D + + +G  
Sbjct: 248 NRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPH-AVSLAWSADGQTLFAGYT 306
Query: 456 DGKIKVWNLVAA 467
           D  I+VW +  A
Sbjct: 307 DNVIRVWQVXTA 318

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 343 SPNEI-TLRRVLVGHRAAVNVVDFDE---KYIVSASGDRTIKVWNTSSCEF-----VRTL 393
           + NE+  LR  L GH   V  +         ++SAS D+T+  W  +  +      VR+ 
Sbjct: 2   ASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF 61
Query: 394 NGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--AKR 449
            GH   +    L       +S S D T+RLWD+  G   +   GH+  V  +  D  A  
Sbjct: 62  KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASX 121
Query: 450 IVSGAYDGKIKVWNL 464
           I+SG+ D  IKVW +
Sbjct: 122 IISGSRDKTIKVWTI 136

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 37/271 (13%)
Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
           F L   + ++ N        +D + IV+G+ +  +++W++     + VL  H   ++ ++
Sbjct: 98  FALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWNKTG-ALLNVLNFHRAPIVSVK 156
Query: 282 Y--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTC---SKDRSI 336
           +  D   IIS   ++   +W+V +G    T++ H E    L+ + G  +     S D S+
Sbjct: 157 WNKDGTHIISMDVENVTILWNVISG----TVMQHFE----LKETGGSSINAENHSGDGSL 208
Query: 337 AV---W----DMVSPN-----------EITLRRVLVGHRAAVNVVDFDE--KYIVSASGD 376
            V   W      V P            E T    L+GH   ++V++F++  K ++SAS D
Sbjct: 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD 268
Query: 377 RTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGA--CLRVL 433
            T+++W+  +        GH + I    +  D  V+S S D ++RLW ++      L ++
Sbjct: 269 GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV 328
Query: 434 EGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
           +G       I  D ++      DG++ V++L
Sbjct: 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDL 359

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 40/266 (15%)
Query: 243 DDHKIVSGLRDNTIKVWDRVSLQ-------CIKVLTGHTGSV--LCLQYDERVIISGSSD 293
           D   ++SG RD T+ +W     +         K LTGH   V  L L  +    IS S D
Sbjct: 38  DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD 97
Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVS-------- 343
            T+R+WD+ TG      + H   V  + FS  N  +++   +R I +W+++         
Sbjct: 98  KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE 157
Query: 344 ----PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
                + ++  R     ++A  V  F   Y  S   D  +KVWNT + +   T   H+  
Sbjct: 158 KENHSDWVSCVRYSPIMKSANKVQPF-APYFASVGWDGRLKVWNT-NFQIRYTFKAHESN 215
Query: 400 IACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL-----VRCIRFDAK-RIV 451
           +  L      + + +G  D  + +WDI     L +     E      +  I F+ K + V
Sbjct: 216 VNHLSISPNGKYIATGGKDKKLLIWDI-----LNLTYPQREFDAGSTINQIAFNPKLQWV 270
Query: 452 SGAYDGKIKVWNLVAALDPRAPTTTL 477
           +   D  +K++NL+     +AP  T+
Sbjct: 271 AVGTDQGVKIFNLMT--QSKAPVCTI 294

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE- 305
           +  G     +++WD    + ++ +T H+  V  L ++  ++ SGS    +   DV   E 
Sbjct: 173 LAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 232
Query: 306 MVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNE---ITLRRVLVGHRAAV 360
            V TL  H + V  LR++     + +   D  + VW   +P E   + L +    H+ AV
Sbjct: 233 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS-APGEGGWVPL-QTFTQHQGAV 290
Query: 361 NVV---DFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACL---QYRDRLVVS 412
             V    +    + +  G  DR I++WN  S   +  ++ H +  + L    Y++ +   
Sbjct: 291 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 350
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP 470
           G + N + +W     A +  L+GH   V  +    D   + S A D  +++W     LDP
Sbjct: 351 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF-ELDP 409

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-----IACLQYRDRLVVSGS 414
           +N+VD+    +++ + D ++ +W+ SS + ++ L   + G     +A ++  + L V G+
Sbjct: 119 LNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GT 177
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI 459
           S   ++LWD++    LR +  H   V  + +++  + SG+  G I
Sbjct: 178 SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHI 222

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 267 IKVLTGHTGSVLCLQYDER---VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
           I++   H G V   +Y  +   VI + +  S V V+D             C+  L LR  
Sbjct: 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH 180
Query: 324 -------------NGMMVTCSKDRSIAVWDM-VSPNE---ITLRRVLVGHRAAVNVVDFD 366
                        NG +++ S D +I +WD+  +P E   I  + +  GH A V  V + 
Sbjct: 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH 240
Query: 367 ---EKYIVSASGDRTIKVWNT---SSCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDN 417
              E    S + D+ + +W+T   ++ +   T++ H   + CL    Y + ++ +GS+D 
Sbjct: 241 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 300
Query: 418 TIRLWDI-ECGACLRVLEGHEELVRCIRFDAKR---IVSGAYDGKIKVWNL 464
           T+ LWD+      L   E H++ +  +++       + S   D ++ VW+L
Sbjct: 301 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 351

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 19/240 (7%)
Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE- 305
           +  G     +++WD    + ++ +T H+  V  L ++  ++ SGS    +   DV   E 
Sbjct: 162 LAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEH 221
Query: 306 MVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNE---ITLRRVLVGHRAAV 360
            V TL  H + V  LR++     + +   D  + VW   +P E   + L +    H+ AV
Sbjct: 222 HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS-APGEGGWVPL-QTFTQHQGAV 279
Query: 361 NVV---DFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACL---QYRDRLVVS 412
             V    +    + +  G  DR I++WN  S   +  ++ H +  + L    Y++ +   
Sbjct: 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339
Query: 413 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP 470
           G + N + +W     A +  L+GH   V  +    D   + S A D  +++W     LDP
Sbjct: 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF-ELDP 398

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-----IACLQYRDRLVVSGS 414
           +N+VD+    +++ + D ++ +W+ SS + ++ L   + G     +A ++  + L V G+
Sbjct: 108 LNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GT 166
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI 459
           S   ++LWD++    LR +  H   V  + +++  + SG+  G I
Sbjct: 167 SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHI 211

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 267 IKVLTGHTGSVLCLQYDER---VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
           I++   H G V   +Y  +   VI + +  S V V+D             C+  L LR  
Sbjct: 123 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH 182
Query: 324 -------------NGMMVTCSKDRSIAVWDM-VSPNE---ITLRRVLVGHRAAVNVVDFD 366
                        NG +++ S D +I +WD+  +P E   I  + +  GH A V  V + 
Sbjct: 183 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH 242
Query: 367 ---EKYIVSASGDRTIKVWNT---SSCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDN 417
              E    S + D+ + +W+T   ++ +   T++ H   + CL    Y + ++ +GS+D 
Sbjct: 243 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 302
Query: 418 TIRLWDI-ECGACLRVLEGHEELVRCIRFDAKR---IVSGAYDGKIKVWNL 464
           T+ LWD+      L   E H++ +  +++       + S   D ++ VW+L
Sbjct: 303 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 353

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 267 IKVLTGHTGSVLCLQYDER---VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS 323
           I++   H G V   +Y  +   VI + +  S V V+D             C+  L LR  
Sbjct: 125 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH 184
Query: 324 -------------NGMMVTCSKDRSIAVWDM-VSPNE---ITLRRVLVGHRAAVNVVDFD 366
                        NG +++ S D +I +WD+  +P E   I  + +  GH A V  V + 
Sbjct: 185 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH 244
Query: 367 ---EKYIVSASGDRTIKVWNT---SSCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDN 417
              E    S + D+ + +W+T   ++ +   T++ H   + CL    Y + ++ +GS+D 
Sbjct: 245 LLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 304
Query: 418 TIRLWDI-ECGACLRVLEGHEELVRCIRFDAKR---IVSGAYDGKIKVWNL 464
           T+ LWD+      L   E H++ +  +++       + S   D ++ VW+L
Sbjct: 305 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDL 355

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 17/236 (7%)
Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE-MVN 308
           G     +++WD    + ++ +T H+  V  L ++  ++ SGS    +   DV   E  V 
Sbjct: 85  GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA 144
Query: 309 TLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITL--RRVLVGHRAAVNVV- 363
           TL  H + V  LR++     + +   D  + VW   +P E      +    H+ AV  V 
Sbjct: 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS-APGEGGWVPLQTFTQHQGAVKAVA 203
Query: 364 --DFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACL---QYRDRLVVSGSSD 416
              +    + +  G  DR I++WN  S   +  ++ H +  + L    Y++ +   G + 
Sbjct: 204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ 263
Query: 417 NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP 470
           N + +W     A +  L+GH   V  +    D   + S A D  +++W     LDP
Sbjct: 264 NQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF-ELDP 318

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-----IACLQYRDRLVVSGS 414
           +N+VD+    +++ + D ++ +W+ SS + ++ L   + G     +A ++  + L V G+
Sbjct: 28  LNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GT 86
Query: 415 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI 459
           S   ++LWD++    LR +  H   V  + +++  + SG+  G I
Sbjct: 87  SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHI 131

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 253 DNTIKVW--DRVSLQCIKVLT-GHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNTG--E 305
           D  I++W  +  S  C  VL+ GH  +V  + +      + S S D+T  +W  N    E
Sbjct: 37  DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE 96
Query: 306 MVNTLIHHCEAVLHLRF--SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV 363
            V TL  H   V  + +  S  ++ TCS+D+S+ VW++   +E     VL  H   V  V
Sbjct: 97  CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156
Query: 364 DF--DEKYIVSASGDRTIKVWNTSSCEFV--RTLNGHKRGIACLQY--RDRLVVSGSSDN 417
            +   ++ + SAS D T+K++     ++V   TL GH+  +  L +    + + S S D 
Sbjct: 157 VWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216
Query: 418 TIRLWDIECGACLRVLEGHEELVRCIRFD 446
           T+R+W        + L G+E+ V C   D
Sbjct: 217 TVRIW-------RQYLPGNEQGVACSGSD 238

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 34/234 (14%)
Query: 262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-- 319
            S+  IK L  +   +    + + ++ +GS+D  +++  V   +   TLI   +   H  
Sbjct: 2   ASINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDF--TLIDVLDETAHKK 59
Query: 320 ------LRFSNGMMVTCSKDRSIAVWDMVSPN----EITLRRVLVGHRAAVNVVDF--DE 367
                  R    ++   S D ++++W          E+ L  ++ GH   V  V +  D 
Sbjct: 60  AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG 119
Query: 368 KYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRL 421
            Y+ + S D+++ +W T       E +  L  H + +  + +   + L+ S S D+T+R+
Sbjct: 120 YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI 179
Query: 422 W-----DIECGACLRVLEGHEELVRCIRFDAK----RIVSGAYDGKIKVWNLVA 466
           W     D EC A   VL GHE  V    FD      R+ SG+ D  ++VW  + 
Sbjct: 180 WKDYDDDWECVA---VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 324 NGMMVTCSKDRSIAVWDMVS-PNE---ITLRRVLVGHRAAVNVVDFD---EKYIVSASGD 376
           +G +++ S D +I +WD+ + P E   +  + +  GH A V  V +    E    S + D
Sbjct: 190 SGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADD 249
Query: 377 RTIKVWNTSSCEFVR---TLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDI-ECGAC 429
           + + +W+T S    +   +++ H   + CL    Y + ++ +GS+D T+ LWD+      
Sbjct: 250 QKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 309
Query: 430 LRVLEGHEELVRCIRFDAKR---IVSGAYDGKIKVWNLVAALDPRAP 473
           L   E H++ +  +++       + S   D ++ VW+L    + ++P
Sbjct: 310 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSP 356

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 18/236 (7%)
Query: 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV 301
           +D   +  GL +  + ++D  S   ++ + GH   V CL ++  V+ SGS    +   DV
Sbjct: 144 HDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDV 203
Query: 302 N-TGEMVNTLIHHCEAVLHLRF-SNGM-MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA 358
                 + TL  H   V  L + S+G+ + +   D  + +WD  S      +     H A
Sbjct: 204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS---IPKFTKTNHNA 260
Query: 359 AVNVV---DFDEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHKRGIACL---QYRDRLV 410
           AV  V    +    + +  G  D+ I  WN ++   V T++   +  + +     ++ + 
Sbjct: 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMS 320
Query: 411 VSGSSDNTIRLWDIECGACLRVLE--GHEE--LVRCIRFDAKRIVSGAYDGKIKVW 462
             G  DN + +W        + ++   H+   L   +  D + + + A D  +K W
Sbjct: 321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW 376

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 97/231 (41%), Gaps = 53/231 (22%)
Query: 247 IVSGLRDNTIKVW----DRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS--DSTVRVWD 300
           +V+G  D+ +KVW    +R+ LQ    L GH   V+ +     + I+ SS  D+ +R+WD
Sbjct: 51  VVTGSLDDLVKVWKWRDERLDLQW--SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108
Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
           +  G+ + ++         L FS                                     
Sbjct: 109 LENGKQIKSIDAGPVDAWTLAFSP------------------------------------ 132
Query: 361 NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT 418
                D +Y+ + +    + ++   S +   +L+   + I  + Y    + + SG+ D  
Sbjct: 133 -----DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 187
Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA 467
           I ++DI  G  L  LEGH   +R + F  D++ +V+ + DG IK++++  A
Sbjct: 188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVL----TGHTGSVLCLQYDERVIISGSSDSTVR 297
           +D     S   D T+KVWD  +LQ   V     T ++  +  +     ++  G+    V+
Sbjct: 110 HDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169
Query: 298 VWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDM--VSPNEITLRR- 351
           + D+ +G   + L  H + +L + +S   + ++ T S D  + +WD+   S   ITL + 
Sbjct: 170 LCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH 229
Query: 352 ----------VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE-----FVRTLN 394
                         H   VN + F  D  ++++   D  +++WN+S+ E     + +  N
Sbjct: 230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCN 289
Query: 395 GHKRG----IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA--K 448
             K+G    ++C    + + V   S  TI ++ +  G  + +L+GH + V C  F +  +
Sbjct: 290 NSKKGLKFTVSCGCSSEFVFVPYGS--TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQ 347
Query: 449 RIVSGAYDGKIKVW 462
            + SG+ D  I  W
Sbjct: 348 ELYSGSRDCNILAW 361

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 356 HRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCE------FVRTLNGHKRGIACLQYR 406
           HR +V  V +   D     S+S D+T+KVW+T++ +      F  T+  H   ++ +  +
Sbjct: 98  HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHH--MSPVSTK 155
Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR---IVSGAYDGKIKVWN 463
             LV  G+    ++L D++ G+C  +L+GH + +  + +  +    + + + D ++K+W+
Sbjct: 156 HCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWD 215
Query: 464 LVAA 467
           +  A
Sbjct: 216 VRRA 219

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSP 344
           IISGS D+TV +++    +  +T   H + V  +R++    +  +   D +I +++ V  
Sbjct: 163 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222
Query: 345 NEI------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
            +       +L+ V   H  +V  + +  D   I SAS D+TIK+WN ++ +  +T+   
Sbjct: 223 TKTGVFEDDSLKNV--AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280
Query: 397 KR------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RFDAK 448
            R      GI    +  + +VS S++  I   + E G+  +V  GH + +  +    D K
Sbjct: 281 TRIEDQQLGII---WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337
Query: 449 RIVSGAYDGKIKVWNLVAALDPR 471
            + S   +G I  W++   +  R
Sbjct: 338 TLFSADAEGHINSWDISTGISNR 360

>pdb|2PM9|A Chain A, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 416

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/295 (20%), Positives = 130/295 (44%), Gaps = 50/295 (16%)
Query: 231 SENSKGVYCLQYD----------DHKIVSGLRDN-TIKVWD----RVSLQCIKVLTGHTG 275
           +++ K +  LQ D          ++KI++G  DN +++++       ++  +   + H+ 
Sbjct: 55  ADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSS 114
Query: 276 SVLCLQYDER---VIISGSSDSTVRVWDVN---------TGEMVNTLIHHCEAVLHLRFS 323
           SV  ++++ +   V+ SG ++  + +WD+N         T       +   + V+ L ++
Sbjct: 115 SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWN 174
Query: 324 NGM---MVTCSKDRSIAVWDMVSPNEI---TLRRVLVGHRAAVNVVDFDEKY---IVSAS 374
             +     +       ++WD+ +  E+   +      G +  ++VV++  K    + +A+
Sbjct: 175 QSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT 234
Query: 375 G---DRTIKVWNTSSCEF-VRTLN-GHKRGIACLQY---RDRLVVSGSSDNTIRLWDIEC 426
           G   D +I +W+  +    ++TLN GH++GI  L +    + L++S   DNT+ LW+ E 
Sbjct: 235 GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294
Query: 427 GACLRVLEGHEELVRCIRFDAKR---IVSGAYDGKIKV---WNLVAALDPRAPTT 475
              L             +F  +        ++D KI+V    NL   LD +   T
Sbjct: 295 AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETET 349

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 26/209 (12%)
Query: 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNT 309
           +D++  VW  ++ + +  L GHTG++  +  D   +  ++GS+D ++++WDV+ G+ V T
Sbjct: 52  KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT 111
Query: 310 LI--------------HHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
                           ++  A+L     N G +     +R  A  ++   +E  + +++ 
Sbjct: 112 WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT 171
Query: 355 GH---RAAVNVVDFDEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACLQYRDRLV 410
                 A V       KYI++   D  I  ++ S + E+V +++ H++ I+ +Q+   L 
Sbjct: 172 HEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLT 231
Query: 411 --VSGSSDNTIRLWDIECGACLRVLEGHE 437
             ++ S D    L D+   + L+VL+ +E
Sbjct: 232 YFITSSRDTNSFLVDV---STLQVLKKYE 257

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 353 LVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR 408
           L GH   +  V ++++   + S S D +  VW + + E + TL+GH   I  +      +
Sbjct: 28  LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK 87
Query: 409 LVVSGSSDNTIRLWDIECGACL 430
             V+GS+D +I+LWD+  G C+
Sbjct: 88  YCVTGSADYSIKLWDVSNGQCV 109

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 270 LTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTGEMVNTLIHH----------CEA 316
           L GH      L ++  +   ++S S D TV +WD+N G     ++             E 
Sbjct: 175 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 234
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---EKYIVSA 373
           V        +  + + D+ + +WD  S        ++  H A VN + F+   E  + + 
Sbjct: 235 VAWHLLHESLFGSVADDQKLXIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 294
Query: 374 SGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDI 424
           S D+T+ +W+  + +  + T   HK  I  + +    + ++ S  +D  + +WD+
Sbjct: 295 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 349

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 270 LTGHTGSVLCLQYDERV---IISGSSDSTVRVWDVNTGEMVNTLIHH----------CEA 316
           L GH      L ++  +   ++S S D TV +WD+N G     ++             E 
Sbjct: 175 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVED 234
Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---EKYIVSA 373
           V        +  + + D+ + +WD  S        ++  H A VN + F+   E  + + 
Sbjct: 235 VAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATG 294
Query: 374 SGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDI 424
           S D+T+ +W+  + +  + T   HK  I  + +    + ++ S  +D  + +WD+
Sbjct: 295 SADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDL 349

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 46/258 (17%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG 304
           V+G R   I++ + +++QCIK   GH  ++  L++   D  +++S S D  +R+W++ T 
Sbjct: 126 VAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 184
Query: 305 EMV---NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
            +V     +  H + VL   +      +++C  D S+ +W       I  +R++    A 
Sbjct: 185 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW------RINSKRMM---NAI 235
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDN 417
               D++         ++T + + +    F    T + H+  + C+++   L++S S +N
Sbjct: 236 KESYDYNP--------NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCEN 287
Query: 418 TIRLW----------DIECGACLRVLEGHEELVRC--------IRFDAKRIVSGAYDGKI 459
            I  W           I+       + G  +  +C        + F  K +  G   GK+
Sbjct: 288 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 347
Query: 460 KVWNLVAALDPRAPTTTL 477
            VW+L      +A  TTL
Sbjct: 348 YVWDLEVEDPHKAKCTTL 365

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 370 IVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 425
           +++ +G R  I++ N  + + ++   GH   I  L++  R   L++S S D+ +RLW+I+
Sbjct: 123 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 182
Query: 426 CGACLRVL---EGHEELVRCIRFD--AKRIVSGAYDGKIKVWNL 464
               + +    EGH + V    +D   ++I+S   D  +K+W +
Sbjct: 183 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRI 226

>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 46/258 (17%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG 304
           V+G R   I++ + +++QCIK   GH  ++  L++   D  +++S S D  +R+W++ T 
Sbjct: 90  VAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148
Query: 305 EMV---NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
            +V     +  H + VL   +      +++C  D S+ +W       I  +R++    A 
Sbjct: 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW------RINSKRMM---NAI 199
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDN 417
               D++         ++T + + +    F    T + H+  + C+++   L++S S +N
Sbjct: 200 KESYDYNP--------NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCEN 251
Query: 418 TIRLW----------DIECGACLRVLEGHEELVRC--------IRFDAKRIVSGAYDGKI 459
            I  W           I+       + G  +  +C        + F  K +  G   GK+
Sbjct: 252 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 311
Query: 460 KVWNLVAALDPRAPTTTL 477
            VW+L      +A  TTL
Sbjct: 312 YVWDLEVEDPHKAKCTTL 329

>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 46/258 (17%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG 304
           V+G R   I++ + +++QCIK   GH  ++  L++   D  +++S S D  +R+W++ T 
Sbjct: 89  VAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 147
Query: 305 EMV---NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
            +V     +  H + VL   +      +++C  D S+ +W       I  +R++    A 
Sbjct: 148 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW------RINSKRMM---NAI 198
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDN 417
               D++         ++T + + +    F    T + H+  + C+++   L++S S +N
Sbjct: 199 KESYDYNP--------NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCEN 250
Query: 418 TIRLW----------DIECGACLRVLEGHEELVRC----IRFDA----KRIVSGAYDGKI 459
            I  W           I+       + G  +  +C    +RF      K +  G   GK+
Sbjct: 251 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSTDFWQKMLALGNQVGKL 310
Query: 460 KVWNLVAALDPRAPTTTL 477
            VW+L      +A  TTL
Sbjct: 311 YVWDLEVEDPHKAKCTTL 328

>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 46/258 (17%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG 304
           V+G R   I++ + +++QCIK   GH  ++  L++   D  +++S S D  +R+W++ T 
Sbjct: 89  VAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 147
Query: 305 EMV---NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
            +V     +  H + VL   +      +++C  D S+ +W       I  +R++    A 
Sbjct: 148 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW------RINSKRMM---NAI 198
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDN 417
               D++         ++T + + +    F    T + H+  + C+++   L++S S +N
Sbjct: 199 KESYDYNP--------NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCEN 250
Query: 418 TIRLW----------DIECGACLRVLEGHEELVRC--------IRFDAKRIVSGAYDGKI 459
            I  W           I+       + G  +  +C        + F  K +  G   GK+
Sbjct: 251 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 310
Query: 460 KVWNLVAALDPRAPTTTL 477
            VW+L      +A  TTL
Sbjct: 311 YVWDLEVEDPHKAKCTTL 328

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 46/258 (17%)
Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG 304
           V+G R   I++ + +++QCIK   GH  ++  L++   D  +++S S D  +R+W++ T 
Sbjct: 85  VAGSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 143
Query: 305 EMV---NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA 359
            +V     +  H + VL   +      +++C  D S+ +W       I  +R++    A 
Sbjct: 144 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW------RINSKRMM---NAI 194
Query: 360 VNVVDFDEKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDN 417
               D++         ++T + + +    F    T + H+  + C+++   L++S S +N
Sbjct: 195 KESYDYNP--------NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCEN 246
Query: 418 TIRLW----------DIECGACLRVLEGHEELVRC--------IRFDAKRIVSGAYDGKI 459
            I  W           I+       + G  +  +C        + F  K +  G   GK+
Sbjct: 247 AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKL 306
Query: 460 KVWNLVAALDPRAPTTTL 477
            VW+L      +A  TTL
Sbjct: 307 YVWDLEVEDPHKAKCTTL 324

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 370 IVSASGDR-TIKVWNTSSCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 425
           +++ +G R  I++ N  + + ++   GH   I  L++  R   L++S S D+ +RLW+I+
Sbjct: 82  LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 141
Query: 426 CGACLRVL---EGHEELVRCIRFD--AKRIVSGAYDGKIKVWNL 464
               + +    EGH + V    +D   ++I+S   D  +K+W +
Sbjct: 142 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRI 185

>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein, Monoclinic Crystal Form Length = 615

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-----NGMMVTCSKDRSIAVWDM 341
           +I+  SD  +  +D  +GE +  +    E V    F+     +    T   D +I VWD+
Sbjct: 222 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 281
Query: 342 VSP---NEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
            +     + TL +  +G++  V VV      I+S S D T+  +     E ++T++GH +
Sbjct: 282 TTSKCVQKWTLDKQQLGNQQ-VGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNK 340
Query: 399 GIACLQYRDRLVVSGSSDNTIRLW 422
           GI  L      ++SGS D  I  W
Sbjct: 341 GITALTVNP--LISGSYDGRIXEW 362

>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein, Monoclinic Crystal Form Length = 615

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 365 FDEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTI 419
            D +   +   D TI+VW+  TS C    TL+  + G   +  +   +  ++S S D T+
Sbjct: 262 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 321
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW----------NLVAALD 469
             +++     L+ + GH + +  +  +   ++SG+YDG+I  W          NL+ +LD
Sbjct: 322 NFYELGHDEVLKTISGHNKGITALTVNP--LISGSYDGRIXEWSSSSXHQDHSNLIVSLD 379

>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic Crystal Form Length = 615

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 287 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-----NGMMVTCSKDRSIAVWDM 341
           +I+  SD  +  +D  +GE +  +    E V    F+     +    T   D +I VWD+
Sbjct: 222 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDV 281
Query: 342 VSP---NEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR 398
            +     + TL +  +G++  V VV      I+S S D T+  +     E ++T++GH +
Sbjct: 282 TTSKCVQKWTLDKQQLGNQQ-VGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNK 340
Query: 399 GIACLQYRDRLVVSGSSDNTIRLW 422
           GI  L      ++SGS D  I  W
Sbjct: 341 GITALTVNP--LISGSYDGRIMEW 362

>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic Crystal Form Length = 615

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 17/120 (14%)
Query: 365 FDEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTI 419
            D +   +   D TI+VW+  TS C    TL+  + G   +  +   +  ++S S D T+
Sbjct: 262 LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 321
Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW----------NLVAALD 469
             +++     L+ + GH + +  +  +   ++SG+YDG+I  W          NL+ +LD
Sbjct: 322 NFYELGHDEVLKTISGHNKGITALTVNP--LISGSYDGRIMEWSSSSMHQDHSNLIVSLD 379

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNV-VDFDEKYIVSASGDRTIKVWNTS 385
           ++   +  ++++WD+ +P       +     A   + +  D K   S   D  I VW+  
Sbjct: 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171
Query: 386 SCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
           +   VR   GH  G +C+   +    + +G  DNT+R WD+  G   R L+ H+
Sbjct: 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG---RQLQQHD 222

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342
           + ++++ G+S   V     NT E V + ++      H    N ++   SK    A +  V
Sbjct: 41  EHKIVVLGNSRG-VDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAV 99
Query: 343 SPNEITLRRVLVG----------------------HRAAVNVVDF--DEKYIVSASGDRT 378
              ++ +RR ++G                      H + +  + F    + ++S+S D  
Sbjct: 100 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQ 159
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 427
           +K+W+       RTL GH+  +  +    R R V+S S D TIRLW  ECG
Sbjct: 160 LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW--ECG 208

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 29/171 (16%)
Query: 283 DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342
           + ++++ G+S   V     NT E V + ++      H    N ++   SK    A +  V
Sbjct: 44  EHKIVVLGNSRG-VDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAV 102
Query: 343 SPNEITLRRVLVG----------------------HRAAVNVVDF--DEKYIVSASGDRT 378
              ++ +RR ++G                      H + +  + F    + ++S+S D  
Sbjct: 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQ 162
Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG 427
           +K+W+       RTL GH+  +  +    R R V+S S D TIRLW  ECG
Sbjct: 163 LKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLW--ECG 211

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	486
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.98
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.98
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.98
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.97
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.97
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.97
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.97
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.97
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.97
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.97
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.97
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.97
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.97
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.97
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.97
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.96
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.96
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.96
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.96
3jro_A	753	Fusion protein of protein transport protein SEC13	99.96
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.96
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.96
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.95
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.95
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.95
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.95
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.95
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.94
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.94
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.93
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.92
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.92
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.91
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.89
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.89
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.88
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.86
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.86
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.86
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.85
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.84
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.84
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.83
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.81
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.81
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.8
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.8
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.79
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.79
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.78
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.76
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.76
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.76
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.75
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.75
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.75
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.74
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.74
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.73
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.73
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.72
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.72
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.7
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.7
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.7
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.68
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.61
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.61
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.6
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.59
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.58
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.57
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.57
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.56
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.56
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.55
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.55
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.55
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.55
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.55
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.54
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.54
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.51
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.51
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.5
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.5
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.49
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.49
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.48
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.47
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.47
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.45
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.43
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.41
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.4
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.39
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.39
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.38
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.38
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.35
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.34
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.34
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.34
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.33
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.33
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.32
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.32
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.3
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.29
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.27
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.27
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.26
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.25
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.23
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.23
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.21
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.19
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.19
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.18
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.16
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.14
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.13
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.12
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.1
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.05
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.04
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.03
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.03
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.03
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.0
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.95
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.93
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.91
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.91
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.9
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.87
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.87
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.85
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.83
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.8
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.8
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.79
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.76
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.74
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.74
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.73
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.73
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.72
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.71
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.7
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.68
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.66
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.64
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.63
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.62
2p64_A	52	F-BOX/WD repeat protein 1A; right handed super-hel	98.42
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.35
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.33
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.29
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.25
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.23
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.22
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.2
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.18
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.11
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.07
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.06
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.05
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.96
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.94
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.91
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.9
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.84
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.8
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.79
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.79
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.77
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.75
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.68
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.67
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.64
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.6
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.51
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.44
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.42
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.41
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.37
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.37
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	97.33
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.31
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.21
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.18
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.16
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.14
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.12
3ott_A	758	Two-component system sensor histidine kinase; beta	97.12
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.11
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.03
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.02
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.0
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.98
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	96.97
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.92
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.92
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	96.8
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.74
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.73
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.72
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.69
3ott_A	758	Two-component system sensor histidine kinase; beta	96.68
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	96.67
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.59
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.59
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.43
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.3
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	96.27
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	96.25
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	96.18
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.08
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.08
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	96.03
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.0
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	95.98
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	95.73
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	95.66
3kci_A	389	Probable E3 ubiquitin-protein ligase HERC2; WD40,	95.63
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.47
3mvd_K	423	Regulator of chromosome condensation; protein-DNA	95.45
4d9s_A	406	UVB-resistance protein UVR8; UV resistance, UV-B p	95.2
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	94.85
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.54
3kci_A	389	Probable E3 ubiquitin-protein ligase HERC2; WD40,	94.18
3of7_A	473	Regulator of chromosome condensation; beta-propell	93.75
1a12_A	413	RCC1, regulator of chromosome condensation 1; guan	93.59
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	93.5
3kya_A	496	Putative phosphatase; structural genomics, joint c	93.43
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	93.18
4d9s_A	406	UVB-resistance protein UVR8; UV resistance, UV-B p	93.13
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	92.0
3mvd_K	423	Regulator of chromosome condensation; protein-DNA	90.86
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	88.98
3of7_A	473	Regulator of chromosome condensation; beta-propell	88.55
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	86.4
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	85.57
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	85.19
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	84.92
3kya_A	496	Putative phosphatase; structural genomics, joint c	81.38
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	80.37
1a12_A	413	RCC1, regulator of chromosome condensation 1; guan	80.1

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=9.2e-43  Score=338.69  Aligned_cols=314  Identities=34%  Similarity=0.598  Sum_probs=279.9

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...+.. ++++++++|++|+.||.|++||+.+++.+..+.+|...|.+++|++                 ..+++++.
T Consensus       116 ~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-----------------~~l~s~~~  177 (445)
T 2ovr_B          116 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD-----------------NIIISGST  177 (445)
T ss_dssp             CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET-----------------TEEEEEET
T ss_pred             ccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC-----------------CEEEEEeC
Confidence            34444433 3456799999999999999999999999999999999999999954                 35778888


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      ||+|++||+.++...                            .   ....+...+.++.++++.+++|+.||.|++||+
T Consensus       178 dg~i~vwd~~~~~~~----------------------------~---~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~  226 (445)
T 2ovr_B          178 DRTLKVWNAETGECI----------------------------H---TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI  226 (445)
T ss_dssp             TSCEEEEETTTTEEE----------------------------E---EECCCSSCEEEEEEETTEEEEEETTSEEEEEES
T ss_pred             CCeEEEEECCcCcEE----------------------------E---EECCCCCcEEEEEecCCEEEEEeCCCEEEEEEC
Confidence            999999998553211                            1   123566778899999999999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEEC
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~  341 (486)
                      .+++.+..+.+|...|.++.++++++++|+.||.|++||+++++.+..+..|...+.++.+++..+++++.||.|++||+
T Consensus       227 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~  306 (445)
T 2ovr_B          227 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV  306 (445)
T ss_dssp             SSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEET
T ss_pred             CCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEEC
Confidence            99999999999999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             CCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcC---CcccEEEEEeCCCEEEEEeCCCc
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSGSSDNT  418 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~  418 (486)
                      ++++..   ..+.+|...+.++.++++++++++.||.|++||+++++.+..+..   |...|.++.++++++++|+.||.
T Consensus       307 ~~~~~~---~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~  383 (445)
T 2ovr_B          307 ETGNCI---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT  383 (445)
T ss_dssp             TTCCEE---EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSE
T ss_pred             CCCCEE---EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCe
Confidence            988754   556688999999999999999999999999999999999999986   88899999999999999999999


Q ss_pred             EEEEECCCCeeeEEe-----cCcccCeEEEEe--cCCEEEEEeCCCc----EEEEeCCCC
Q psy9182         419 IRLWDIECGACLRVL-----EGHEELVRCIRF--DAKRIVSGAYDGK----IKVWNLVAA  467 (486)
Q Consensus       419 v~iwd~~~~~~~~~~-----~~h~~~v~~~~~--~~~~l~s~~~dg~----v~iwdl~~~  467 (486)
                      |++||+.+++.+..+     .+|.+.|++++|  ++.+|++|+.||+    |.+||++..
T Consensus       384 v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          384 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            999999999999888     578889999999  6778999999998    999999854

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.3e-43  Score=336.58  Aligned_cols=276  Identities=30%  Similarity=0.560  Sum_probs=250.6

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++.|+|++.+|++|+.||+|+|||+.+++.+.++.+|...|.+++|+                         
T Consensus       105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~-------------------------  159 (410)
T 1vyh_C          105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD-------------------------  159 (410)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEEC-------------------------
T ss_pred             cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEc-------------------------
Confidence            4678899999999999999999999999999999999999999999999999885                         


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                   +++++|++|+.||+|++||
T Consensus       160 -------------------------------------------------------------~~~~~l~sgs~D~~i~iwd  178 (410)
T 1vyh_C          160 -------------------------------------------------------------HSGKLLASCSADMTIKLWD  178 (410)
T ss_dssp             -------------------------------------------------------------TTSSEEEEEETTSCCCEEE
T ss_pred             -------------------------------------------------------------CCCCEEEEEeCCCeEEEEe
Confidence                                                                         2455677777888888888


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI  336 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i  336 (486)
                      +.+++++..+.+|...|.+++|  +++++++|+.|++|++||++++.++..+.+|...|.++.++++  .+++|+.|+.|
T Consensus       179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v  258 (410)
T 1vyh_C          179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV  258 (410)
T ss_dssp             TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence            8778888888899999999999  7889999999999999999999999999999999999999864  89999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEeC----------------------CCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFD----------------------EKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~----------------------~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      ++||+.+++..   ..+.+|...|.++.|.                      +.++++|+.|+.|++||+++++++..+.
T Consensus       259 ~vwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~  335 (410)
T 1vyh_C          259 RVWVVATKECK---AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV  335 (410)
T ss_dssp             EEEETTTCCEE---EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             EEEECCCCcee---eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence            99999887654   4567899999999983                      5689999999999999999999999999


Q ss_pred             CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         395 GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       395 ~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +|...|.++.++  +++|++|+.||.|++||+.+++++..+.+|...|++++|  ++.+|++|+.||+|++|+++
T Consensus       336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            999999999985  789999999999999999999999999999999999999  77899999999999999964

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=7e-41  Score=336.59  Aligned_cols=323  Identities=32%  Similarity=0.569  Sum_probs=273.3

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceecc--------
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYR--------  171 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~--------  171 (486)
                      .|...+.+++++|++++|++++.||.|++||. +++.+..+.+|...|.+++|.  ++.+++++.|+.+++|        
T Consensus       219 ~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~  297 (577)
T 2ymu_A          219 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQ  297 (577)
T ss_dssp             CCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE
T ss_pred             cCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEE
Confidence            45677889999999999999999999999996 478889999999999999996  3467777777766653        


Q ss_pred             ----------------CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCcc
Q psy9182         172 ----------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK  235 (486)
Q Consensus       172 ----------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (486)
                                      ++..+++++.|+.|++||....                             ....+.. .....
T Consensus       298 ~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-----------------------------~~~~~~~-~~~~v  347 (577)
T 2ymu_A          298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-----------------------------HLQTLTG-HSSSV  347 (577)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-----------------------------EEEEECC-CSSCE
T ss_pred             EEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----------------------------eeEEEeC-CCCCE
Confidence                            3456777777777777775321                             1111211 11223


Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      ..++++++++++++|+.||.|++||. +++.+..+.+|...|.++++  ++++|++++.|+.|++||. +++.+..+..|
T Consensus       348 ~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~  425 (577)
T 2ymu_A          348 WGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH  425 (577)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECC
T ss_pred             EEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCC
Confidence            34556778999999999999999995 67788889999999999998  7899999999999999995 57888899999


Q ss_pred             CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182         314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ...|.+++|+++  .+++++.|+.|++||... +   ....+.+|...|.+++|  ++++|++++.|+.|++||. ++++
T Consensus       426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~---~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~  500 (577)
T 2ymu_A          426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-Q---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL  500 (577)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTS-C---EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCE
T ss_pred             CCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-C---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCE
Confidence            999999999865  899999999999999643 3   23566789999999998  8899999999999999995 6888


Q ss_pred             EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       390 ~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +..+.+|...|++++|+  +++|++++.||.|++||. +++++..+.+|...|++++|  |+++|+|++.||+|++||
T Consensus       501 ~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          501 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            99999999999999984  889999999999999996 58899999999999999999  899999999999999997

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=6.1e-41  Score=310.55  Aligned_cols=276  Identities=22%  Similarity=0.407  Sum_probs=246.8

Q ss_pred             ccccccccccCCccC----cceEEEeecCceeeecccccccc--eeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~--~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|...|.+++++++    +.+|+||+.||+|+|||+.+++.  ...+.+|...|.+++|+                   
T Consensus        29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~-------------------   89 (321)
T 3ow8_A           29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDIS-------------------   89 (321)
T ss_dssp             TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-------------------
T ss_pred             ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEEC-------------------
Confidence            357889999999874    67999999999999999987653  45688999888888774                   


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                                                                                         +++..+++++.|+
T Consensus        90 -------------------------------------------------------------------~~~~~l~s~s~D~  102 (321)
T 3ow8_A           90 -------------------------------------------------------------------HTLPIAASSSLDA  102 (321)
T ss_dssp             -------------------------------------------------------------------SSSSEEEEEETTS
T ss_pred             -------------------------------------------------------------------CCCCEEEEEeCCC
Confidence                                                                               3456788899999


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTC  330 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~  330 (486)
                      .|++||+.+++.+..+..|...+.+++|  ++++|++|+.||.|++||+++++....+..+...+.+++|+++  ++++|
T Consensus       103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg  182 (321)
T 3ow8_A          103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG  182 (321)
T ss_dssp             EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred             cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEE
Confidence            9999999999999999888888888887  7899999999999999999999999999999999999999865  89999


Q ss_pred             eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--
Q psy9182         331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--  406 (486)
Q Consensus       331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--  406 (486)
                      +.||.|++||+++++..   ..+.+|...|.++.|  ++++|++++.|+.|++||+++++....+.+|...|.+++|+  
T Consensus       183 ~~dg~i~iwd~~~~~~~---~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~  259 (321)
T 3ow8_A          183 AIDGIINIFDIATGKLL---HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD  259 (321)
T ss_dssp             ETTSCEEEEETTTTEEE---EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred             cCCCeEEEEECCCCcEE---EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence            99999999999887543   556789999999999  78899999999999999999999999999999999999984  


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +.+|++++.|++|++||+++++++..+.+|...|.+++|  ++++|++++.||.|++||..
T Consensus       260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            789999999999999999999999999999999999999  78899999999999999964

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.7e-40  Score=310.54  Aligned_cols=274  Identities=23%  Similarity=0.448  Sum_probs=238.5

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++.++|++++|++|+.||+|+|||+.+++.+..+..|...|.+++|+               +         
T Consensus        52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s---------------~---------  107 (340)
T 1got_B           52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA---------------P---------  107 (340)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEEC---------------T---------
T ss_pred             cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEEC---------------C---------
Confidence            3577889999999999999999999999999999999999999999889888885               2         


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                    +++++++|+.|+.|++||
T Consensus       108 --------------------------------------------------------------~~~~l~s~~~d~~v~iw~  125 (340)
T 1got_B          108 --------------------------------------------------------------SGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             --------------------------------------------------------------TSSEEEEEETTCEEEEEE
T ss_pred             --------------------------------------------------------------CCCEEEEEeCCCeEEEEE
Confidence                                                                          344455555555555555


Q ss_pred             CCCc----eeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCC
Q psy9182         261 RVSL----QCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKD  333 (486)
Q Consensus       261 ~~~~----~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d  333 (486)
                      +.+.    .....+.+|.+.|.++.| ++..+++++.||.|++||+++++.+..+.+|...|.+++|+++  .+++|+.|
T Consensus       126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d  205 (340)
T 1got_B          126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD  205 (340)
T ss_dssp             TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence            5443    345567789999999998 5667999999999999999999999999999999999999865  89999999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC--CcccEEEEEeC--C
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG--HKRGIACLQYR--D  407 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~--~  407 (486)
                      +.|++||++++...   ..+.+|...|.++.|  ++++|++++.|+.|++||+++++.+..+..  +...|.+++|+  +
T Consensus       206 ~~v~~wd~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g  282 (340)
T 1got_B          206 ASAKLWDVREGMCR---QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG  282 (340)
T ss_dssp             SCEEEEETTTCSEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred             CcEEEEECCCCeeE---EEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence            99999999987644   556789999999999  789999999999999999999988877753  33578888884  8


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ++|++|+.||.|++||+.+++.+..+.+|...|.+++|  ++.+|++|+.||+|++||
T Consensus       283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          283 RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            99999999999999999999999999999999999999  888999999999999997

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.4e-40  Score=304.53  Aligned_cols=276  Identities=22%  Similarity=0.379  Sum_probs=242.5

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...|.++.|+|++++|++|+.||+|++||+.+++.+..+.+|..+|.+++|.                          
T Consensus        11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~--------------------------   64 (304)
T 2ynn_A           11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFI--------------------------   64 (304)
T ss_dssp             EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--------------------------
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEe--------------------------
Confidence            467789999999999999999999999999999999999999999888888774                          


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                  +++++|++|+.|+.|++||+
T Consensus        65 ------------------------------------------------------------~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A           65 ------------------------------------------------------------ARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             ------------------------------------------------------------GGGTEEEEEETTSEEEEEET
T ss_pred             ------------------------------------------------------------CCCCEEEEECCCCEEEEEEC
Confidence                                                                        35677899999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC---CeEEEEeCCCc
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRS  335 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~  335 (486)
                      .+++.+..+.+|...|.++++  +++++++|+.||+|++||++++ .....+.+|...|.+++|+|   ..+++|+.|+.
T Consensus        85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~  164 (304)
T 2ynn_A           85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT  164 (304)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred             CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence            999999999999999999998  6789999999999999999887 45667889999999999986   38999999999


Q ss_pred             EEEEECCCCCceeeEEeeecCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCE
Q psy9182         336 IAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRL  409 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~  409 (486)
                      |++||++......  ....++...+..+.+    ++.++++++.|+.|++||+++++++..+.+|...|.++.++  +.+
T Consensus       165 v~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~  242 (304)
T 2ynn_A          165 VKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPI  242 (304)
T ss_dssp             EEEEETTCSSCSE--EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSE
T ss_pred             EEEEECCCCCccc--eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCE
Confidence            9999998766443  333456677877777    56799999999999999999999999999999999999885  789


Q ss_pred             EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCC--EEEEEeCCCcEEEEeCCC
Q psy9182         410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK--RIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       410 l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~--~l~s~~~dg~v~iwdl~~  466 (486)
                      |++|+.||+|++||+++++++..+..|...+.+++|  ++.  ++++|+.|| +.+|++..
T Consensus       243 l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~  302 (304)
T 2ynn_A          243 IISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN  302 (304)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred             EEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence            999999999999999999999999999999999998  443  477776554 88888864

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.2e-40  Score=334.28  Aligned_cols=322  Identities=19%  Similarity=0.257  Sum_probs=271.3

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      ..+....++.++|||++||+++ ++.|++||+.+++....+.+|...|.+++|+               +++.+|++++.
T Consensus        16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~s---------------pdg~~lasg~~   79 (611)
T 1nr0_A           16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS---------------PSGYYCASGDV   79 (611)
T ss_dssp             CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEEC---------------TTSSEEEEEET
T ss_pred             cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEEC---------------CCCcEEEEEeC
Confidence            3456678889999999999987 5699999999999999999999999999998               68899999999


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC----CeEE
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD----NTIK  257 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~  257 (486)
                      |++|++||+.+....                          ....+.. .......+++++++++|++++.+    +.|+
T Consensus        80 d~~v~lWd~~~~~~~--------------------------~~~~~~~-~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~  132 (611)
T 1nr0_A           80 HGNVRIWDTTQTTHI--------------------------LKTTIPV-FSGPVKDISWDSESKRIAAVGEGRERFGHVF  132 (611)
T ss_dssp             TSEEEEEESSSTTCC--------------------------EEEEEEC-SSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred             CCCEEEeECCCCcce--------------------------eeEeecc-cCCceEEEEECCCCCEEEEEECCCCceeEEE
Confidence            999999997432210                          1111221 12334456677789999988865    4677


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                      +||  .++....+.+|...|.+++|  ++. .|++|+.|++|++||..+++....+.+|...|.+++|+|+  ++++++.
T Consensus       133 ~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~  210 (611)
T 1nr0_A          133 LFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG  210 (611)
T ss_dssp             ETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             Eee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence            777  56667788999999999999  444 6999999999999999999999999999999999999875  8999999


Q ss_pred             CCcEEEEECCCCCceeeEEe----eecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCC---cccEEEE
Q psy9182         333 DRSIAVWDMVSPNEITLRRV----LVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH---KRGIACL  403 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~----~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~  403 (486)
                      |+.|++||+.+++.......    ..+|...|.++.|  ++++|++++.|++|++||+++++.+..+..+   ......+
T Consensus       211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~  290 (611)
T 1nr0_A          211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI  290 (611)
T ss_dssp             TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred             CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence            99999999988775432110    1179999999999  7899999999999999999999998888643   3456777


Q ss_pred             EeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         404 QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       404 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      .+++..+++++.|+.|++||..+++....+.+|...|++++|  ++++|++++.||+|++||+.++.
T Consensus       291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~  357 (611)
T 1nr0_A          291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI  357 (611)
T ss_dssp             EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred             EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence            889999999999999999999999999999999999999999  89999999999999999998764

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=6.9e-40  Score=330.60  Aligned_cols=320  Identities=17%  Similarity=0.271  Sum_probs=269.9

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...+.+++|+|+|++||+|+.||+|+|||+.+++  ...++.+|.+.|.+++|+               +++..|++
T Consensus        56 ~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs---------------~dg~~l~~  120 (611)
T 1nr0_A           56 TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWD---------------SESKRIAA  120 (611)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEEC---------------TTSCEEEE
T ss_pred             cCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEEC---------------CCCCEEEE
Confidence            3567789999999999999999999999999997554  456788999999999998               57777777


Q ss_pred             CCCC----CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCC-EEEEEe
Q psy9182         179 SSHD----DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDH-KIVSGL  251 (486)
Q Consensus       179 ~s~d----g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~-~l~~~~  251 (486)
                      ++.+    +.|++||...  ....                               ..+|...+  ++++|++. .|++|+
T Consensus       121 ~~~~~~~~~~v~~wd~~~--~~~~-------------------------------l~gh~~~v~~v~f~p~~~~~l~s~s  167 (611)
T 1nr0_A          121 VGEGRERFGHVFLFDTGT--SNGN-------------------------------LTGQARAMNSVDFKPSRPFRIISGS  167 (611)
T ss_dssp             EECCSSCSEEEEETTTCC--BCBC-------------------------------CCCCSSCEEEEEECSSSSCEEEEEE
T ss_pred             EECCCCceeEEEEeeCCC--Ccce-------------------------------ecCCCCCceEEEECCCCCeEEEEEe
Confidence            7654    4788888422  1100                               11344444  44556665 699999


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-------ccCccEEEEEE
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-------HHCEAVLHLRF  322 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~~~~~i~~~~~  322 (486)
                      .|++|++||..++++...+.+|...|.+++|  ++++|++|+.||+|++||+.+++.+..+.       .|...|.+++|
T Consensus       168 ~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~  247 (611)
T 1nr0_A          168 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW  247 (611)
T ss_dssp             TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred             CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE
Confidence            9999999999999999999999999999999  78999999999999999999999988884       68999999999


Q ss_pred             cCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE
Q psy9182         323 SNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI  400 (486)
Q Consensus       323 ~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v  400 (486)
                      +++  .+++++.|+.|++||+.+++..........+......+.++++.+++++.|+.+++||...++....+.+|...|
T Consensus       248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v  327 (611)
T 1nr0_A          248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI  327 (611)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred             CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE
Confidence            865  899999999999999998765543332233455667778899999999999999999999999889999999999


Q ss_pred             EEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         401 ACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       401 ~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      .+++++  +++|++++.|+.|++||+.+++....+ .+|...|.+++| .+..|++++.|+.+++|++....
T Consensus       328 ~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~  399 (611)
T 1nr0_A          328 TALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG  399 (611)
T ss_dssp             EEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred             EEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcc
Confidence            999984  899999999999999999999887766 679999999999 66789999999999999987653

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=7.2e-40  Score=305.62  Aligned_cols=229  Identities=17%  Similarity=0.256  Sum_probs=190.1

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEE----EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV----LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      +++++ +.+++|+.||.|++||+.+++.+..    ..+|...|.+++|  ++++|++|+.||+|++||+++++++..+.+
T Consensus        89 ~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~  167 (344)
T 4gqb_B           89 TWVGE-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA  167 (344)
T ss_dssp             EEETT-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             EEeCC-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence            33444 4678889999999999888765543    4489999999999  789999999999999999999999999999


Q ss_pred             cCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCC
Q psy9182         313 HCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       313 ~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      |...|.+++|+++   .+++++.|+.|++||+++++..... ....+...+.++.+   +++++++|+.|+.|++||+++
T Consensus       168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~  246 (344)
T 4gqb_B          168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS  246 (344)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred             cCCceEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence            9999999999753   7899999999999999988765322 12345567888887   467899999999999999999


Q ss_pred             ceEEEEEcCCcccEEEEEeC--C-CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCC-EEEEEeCCCcEE
Q psy9182         387 CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK-RIVSGAYDGKIK  460 (486)
Q Consensus       387 ~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~~dg~v~  460 (486)
                      ++++..+.+|...|.+++|+  + ++|++|+.|++|+|||+++++++ .+.+|.+.|++++|  ++. .|+++|.||+|+
T Consensus       247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~  325 (344)
T 4gqb_B          247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV  325 (344)
T ss_dssp             --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred             CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence            99999999999999999995  4 68999999999999999988765 57899999999999  554 577999999999


Q ss_pred             EEeCCCCCCC
Q psy9182         461 VWNLVAALDP  470 (486)
Q Consensus       461 iwdl~~~~~~  470 (486)
                      +|++.+...|
T Consensus       326 ~w~v~~~~~~  335 (344)
T 4gqb_B          326 HHVVPTEPLP  335 (344)
T ss_dssp             EEECCC----
T ss_pred             EEECCCCCCC
Confidence            9999876443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=4.2e-40  Score=318.84  Aligned_cols=277  Identities=31%  Similarity=0.639  Sum_probs=239.5

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      +...+.++.+  ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|                            
T Consensus       132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~----------------------------  181 (435)
T 1p22_A          132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY----------------------------  181 (435)
T ss_dssp             SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC----------------------------
T ss_pred             CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE----------------------------
Confidence            3345666655  6788888888888888888888888888777777766655                            


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                  +++++++|+.||.|++||+.
T Consensus       182 ------------------------------------------------------------~~~~l~sg~~dg~i~vwd~~  201 (435)
T 1p22_A          182 ------------------------------------------------------------DERVIITGSSDSTVRVWDVN  201 (435)
T ss_dssp             ------------------------------------------------------------CSSEEEEEETTSCEEEEESS
T ss_pred             ------------------------------------------------------------CCCEEEEEcCCCeEEEEECC
Confidence                                                                        45578889999999999999


Q ss_pred             CceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEE---EEecccCccEEEEEEcCCeEEEEeCCCcEEEE
Q psy9182         263 SLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMV---NTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVW  339 (486)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~  339 (486)
                      +++.+..+.+|...|.++.++++.+++|+.||.|++||+++++..   ..+.+|...|.++.+.++.+++|+.||.|++|
T Consensus       202 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vw  281 (435)
T 1p22_A          202 TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW  281 (435)
T ss_dssp             SCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred             CCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEE
Confidence            999999999999999999999999999999999999999887654   66788999999999999999999999999999


Q ss_pred             ECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182         340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI  419 (486)
Q Consensus       340 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v  419 (486)
                      |+++++..   ..+.+|...+.++.++++++++|+.||.|++||+++++.+..+.+|...|.++.+++.+|++|+.||.|
T Consensus       282 d~~~~~~~---~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i  358 (435)
T 1p22_A          282 NTSTCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI  358 (435)
T ss_dssp             ETTTCCEE---EEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCE
T ss_pred             ECCcCcEE---EEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcE
Confidence            99988654   556689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCe---------eeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182         420 RLWDIECGA---------CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAALDPRA  472 (486)
Q Consensus       420 ~iwd~~~~~---------~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~~~~~  472 (486)
                      ++||+.+++         ++..+.+|...|.+++|++.+|++++.||.|++||+........
T Consensus       359 ~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~~~~  420 (435)
T 1p22_A          359 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQA  420 (435)
T ss_dssp             EEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC---------
T ss_pred             EEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence            999997765         88899999999999999999999999999999999988765443

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.9e-39  Score=303.64  Aligned_cols=280  Identities=23%  Similarity=0.380  Sum_probs=240.3

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++.++|++++|+||+.||+|+|||..+++....+..|...|.+++|+               +++..+++++
T Consensus        61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~s---------------p~g~~lasg~  125 (354)
T 2pbi_B           61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYA---------------PSGCAIACGG  125 (354)
T ss_dssp             ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEEC---------------TTSSEEEEES
T ss_pred             cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEEC---------------CCCCEEEEee
Confidence            4577899999999999999999999999999999999999999999899999887               4666677777


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .|+.+++|++......                                                                
T Consensus       126 ~d~~i~v~~~~~~~~~----------------------------------------------------------------  141 (354)
T 2pbi_B          126 LDNKCSVYPLTFDKNE----------------------------------------------------------------  141 (354)
T ss_dssp             TTSEEEEEECCCCTTC----------------------------------------------------------------
T ss_pred             CCCCEEEEEEeccccc----------------------------------------------------------------
Confidence            7777777775221000                                                                


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC----CeEEEEeCCC
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN----GMMVTCSKDR  334 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~----~~l~~~~~dg  334 (486)
                       ........+.+|...|.++.|  ++..|++++.||+|++||+++++.+..+.+|...|.++.+.+    +.+++|+.||
T Consensus       142 -~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg  220 (354)
T 2pbi_B          142 -NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK  220 (354)
T ss_dssp             -CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred             -cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence             001223345568899999998  678999999999999999999999999999999999999864    4899999999


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--ccEEEEEeC--CC
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYR--DR  408 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~~--~~  408 (486)
                      .|++||+++++..   ..+.+|...|.++.|  ++.++++++.|++|++||+++++.+..+..+.  ..+.++.++  +.
T Consensus       221 ~v~~wd~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~  297 (354)
T 2pbi_B          221 KAMVWDMRSGQCV---QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR  297 (354)
T ss_dssp             CEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred             eEEEEECCCCcEE---EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC
Confidence            9999999988654   556789999999999  78999999999999999999988877776443  467788774  89


Q ss_pred             EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +|++|+.|+.|++||+.+++.+..+.+|...|++++|  ++++|++|+.||+|++|+
T Consensus       298 ~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          298 LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            9999999999999999999999999999999999999  889999999999999996

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.1e-39  Score=298.59  Aligned_cols=277  Identities=31%  Similarity=0.587  Sum_probs=245.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++.++|++++|++|+.||.|++||..+++....+.+|...|.+++|+                         
T Consensus        20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~-------------------------   74 (312)
T 4ery_A           20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS-------------------------   74 (312)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC-------------------------
T ss_pred             cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEc-------------------------
Confidence            4577889999999999999999999999999999999999999999999888874                         


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                   +++++|++|+.||.|++||
T Consensus        75 -------------------------------------------------------------~~~~~l~s~~~d~~i~vwd   93 (312)
T 4ery_A           75 -------------------------------------------------------------SDSNLLVSASDDKTLKIWD   93 (312)
T ss_dssp             -------------------------------------------------------------TTSSEEEEEETTSEEEEEE
T ss_pred             -------------------------------------------------------------CCCCEEEEECCCCEEEEEE
Confidence                                                                         3566788888999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI  336 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i  336 (486)
                      +.+++.+..+.+|...|.++.|  +++++++|+.||.|++||+++++.+..+..|...|.++.|+++  .+++++.||.|
T Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i  173 (312)
T 4ery_A           94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC  173 (312)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence            9999999999999999999998  6889999999999999999999999999999999999999864  89999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE----EEEe-CCCE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA----CLQY-RDRL  409 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~----~~~~-~~~~  409 (486)
                      ++||+++++...  .....+...+..+.+  +++++++++.|+.|++||+++++.+..+.+|.....    .+.. ++.+
T Consensus       174 ~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (312)
T 4ery_A          174 RIWDTASGQCLK--TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW  251 (312)
T ss_dssp             EEEETTTCCEEE--EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred             EEEECCCCceee--EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence            999999876543  333456677888887  789999999999999999999999999998876432    2222 4789


Q ss_pred             EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEe--CCCcEEEEeCC
Q psy9182         410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA--YDGKIKVWNLV  465 (486)
Q Consensus       410 l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~--~dg~v~iwdl~  465 (486)
                      |++|+.||.|++||+++++.+..+.+|...|.+++|  ++++|++++  .|++|++|+.+
T Consensus       252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            999999999999999999999999999999999999  788899987  69999999975

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.2e-38  Score=320.43  Aligned_cols=324  Identities=32%  Similarity=0.581  Sum_probs=267.7

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec--ceeEecCCCCceecc-------
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRYR-------  171 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~--~~~~~~~~d~~i~~~-------  171 (486)
                      ..+...+.++.++|++++|++++.||.|++||. +++.+..+.+|...|.+++|++  +.+++++.|+.+++|       
T Consensus       177 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~~  255 (577)
T 2ymu_A          177 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL  255 (577)
T ss_dssp             ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred             cCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCEE
Confidence            345567788899999999999999999999996 5788999999999999999973  355666666655543       


Q ss_pred             -----------------CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCc
Q psy9182         172 -----------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS  234 (486)
Q Consensus       172 -----------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (486)
                                       ++..+++++.|+.|++||..                             ......+.   .+.
T Consensus       256 ~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-----------------------------~~~~~~~~---~h~  303 (577)
T 2ymu_A          256 QTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-----------------------------GQLLQTLT---GHS  303 (577)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----------------------------SCEEEEEC---CCS
T ss_pred             EEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-----------------------------CcEEEEEe---cCC
Confidence                             23445556666666666532                             11222222   333


Q ss_pred             cce--EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         235 KGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       235 ~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                      ..+  ++++++++.+++++.||.|++||... ..+..+.+|...+.++++  +++++++++.||.|++||. +++.+..+
T Consensus       304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~  381 (577)
T 2ymu_A          304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL  381 (577)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEe
Confidence            344  45667899999999999999999765 456778899999999988  7899999999999999995 57888899


Q ss_pred             cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC
Q psy9182         311 IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      ..|...|.+++|+++  .+++++.|+.|++||.. ++   ....+.+|...|.++.|  ++++|++++.|+.|++||. +
T Consensus       382 ~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~  456 (577)
T 2ymu_A          382 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-N  456 (577)
T ss_dssp             ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-T
T ss_pred             cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CC---EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-C
Confidence            999999999999865  89999999999999964 33   33566789999999998  7899999999999999996 5


Q ss_pred             ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182         387 CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       387 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iw  462 (486)
                      ++.+..+.+|...|.+++++  +++|++++.|+.|++||. +++++..+.+|...|++++|  ++++|++++.||.|++|
T Consensus       457 ~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw  535 (577)
T 2ymu_A          457 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW  535 (577)
T ss_dssp             SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred             CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence            78888999999999999984  899999999999999995 58899999999999999999  88999999999999999


Q ss_pred             eCC
Q psy9182         463 NLV  465 (486)
Q Consensus       463 dl~  465 (486)
                      |..
T Consensus       536 d~~  538 (577)
T 2ymu_A          536 NRN  538 (577)
T ss_dssp             CTT
T ss_pred             eCC
Confidence            964

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=9.1e-40  Score=307.37  Aligned_cols=280  Identities=18%  Similarity=0.295  Sum_probs=220.7

Q ss_pred             ccccccccccCCccCcceEEEeec------Cceeeecccccccce----eeecCcccceeEEEeecceeEecCCCCceec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASG------DRTIKVWNTSSCEFV----RTLNGHKRGIACLQYRDRLVVSGSSDNTIRY  170 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~------dg~v~iWd~~~~~~~----~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~  170 (486)
                      ..|...|.++.|+|||++||+|+.      ||.|++|+..++...    ....+|...|.+++|++              
T Consensus        39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~--------------  104 (357)
T 4g56_B           39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVS--------------  104 (357)
T ss_dssp             -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEET--------------
T ss_pred             ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcC--------------
Confidence            357788999999999999999997      677888887766543    33356777788888752              


Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG  250 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  250 (486)
                       ++                                                                        .++++
T Consensus       105 -d~------------------------------------------------------------------------~~l~~  111 (357)
T 4g56_B          105 -EK------------------------------------------------------------------------GILVA  111 (357)
T ss_dssp             -TT------------------------------------------------------------------------EEEEE
T ss_pred             -CC------------------------------------------------------------------------CEEEE
Confidence             22                                                                        22334


Q ss_pred             ecCCeEEEEECCCceee----EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182         251 LRDNTIKVWDRVSLQCI----KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~  324 (486)
                      +.||.|++||+.+++..    ....+|...|.+++|  ++++|++|+.||.|++||+++++.+..+..|...|.+++|++
T Consensus       112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~  191 (357)
T 4g56_B          112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP  191 (357)
T ss_dssp             ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred             ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence            44445555554444322    233478999999998  789999999999999999999999999999999999999975


Q ss_pred             C---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc
Q psy9182         325 G---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       325 ~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      +   .+++++.||.|++||+++++.... .....+...+.++.|   ++.++++|+.|+.|++||+++++.+..+.+|..
T Consensus       192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~  270 (357)
T 4g56_B          192 GKDTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQ  270 (357)
T ss_dssp             TCSSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSS
T ss_pred             CCCceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccce
Confidence            3   789999999999999998765432 223456778899998   357899999999999999999999999999999


Q ss_pred             cEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         399 GIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       399 ~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      .|.+++|+   +++|++|+.|++|+|||+++++++..+ +|.+.|++++|   ++.+|++++.||+|++|++.+..+
T Consensus       271 ~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~  346 (357)
T 4g56_B          271 NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR  346 (357)
T ss_dssp             CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred             eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence            99999984   368999999999999999999887665 79999999999   578999999999999999986543

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-39  Score=312.07  Aligned_cols=316  Identities=13%  Similarity=0.223  Sum_probs=265.0

Q ss_pred             ccccccccccCCccCcc-eEEEeecCceeeeccc----cccc------ceeeecC----------cccceeEEEeeccee
Q psy9182         101 PMLQRDFISLLPNFDEK-YIVSASGDRTIKVWNT----SSCE------FVRTLNG----------HKRGIACLQYRDRLV  159 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~-~l~tg~~dg~v~iWd~----~~~~------~~~~l~~----------h~~~V~~~~~~~~~~  159 (486)
                      ..|...|.++.++|+++ +||+|+.||.|++||+    .+++      ....+..          |...|.+++|+    
T Consensus        42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----  117 (425)
T 1r5m_A           42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS----  117 (425)
T ss_dssp             EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC----
T ss_pred             eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc----
Confidence            34557899999999999 9999999999999999    8888      4555554          78899999997    


Q ss_pred             EecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE
Q psy9182         160 VSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC  239 (486)
Q Consensus       160 ~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  239 (486)
                                 +++.+|++++.||.|++||... .                            ....+.. .......++
T Consensus       118 -----------~~~~~l~~~~~dg~i~i~~~~~-~----------------------------~~~~~~~-~~~~v~~~~  156 (425)
T 1r5m_A          118 -----------HDGNSIVTGVENGELRLWNKTG-A----------------------------LLNVLNF-HRAPIVSVK  156 (425)
T ss_dssp             -----------TTSSEEEEEETTSCEEEEETTS-C----------------------------EEEEECC-CCSCEEEEE
T ss_pred             -----------CCCCEEEEEeCCCeEEEEeCCC-C----------------------------eeeeccC-CCccEEEEE
Confidence                       5778899999999999999321 1                            1111111 122333445


Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCccc---------------EEEEEe-cCCEEEEEeCCCcEEEEECCC
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS---------------VLCLQY-DERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------------v~~~~~-~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      +++++++|++++.||.|++||+.+++.+..+..+...               +.++.+ .+..+++++.+|.|++||+++
T Consensus       157 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~  236 (425)
T 1r5m_A          157 WNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE  236 (425)
T ss_dssp             ECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC
T ss_pred             ECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC
Confidence            5668999999999999999999999999999887776               778887 567899999999999999999


Q ss_pred             CcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcE
Q psy9182         304 GEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTI  379 (486)
Q Consensus       304 ~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i  379 (486)
                      ++.+..+..|...|.+++|+++  .+++++.|+.|++||+++++..   ..+..|...+.++.+  ++ ++++++.|+.|
T Consensus       237 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i  312 (425)
T 1r5m_A          237 KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSV  312 (425)
T ss_dssp             SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEE
T ss_pred             CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcE
Confidence            9999999999999999999864  8999999999999999887654   445678899999999  45 99999999999


Q ss_pred             EEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe--------------------eeEEecCcc
Q psy9182         380 KVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA--------------------CLRVLEGHE  437 (486)
Q Consensus       380 ~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~--------------------~~~~~~~h~  437 (486)
                      ++||+++++.+..+..|...+.++.++  +++|++++.||.|++||+++++                    .+..+.+|.
T Consensus       313 ~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (425)
T 1r5m_A          313 RLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQ  392 (425)
T ss_dssp             EEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTT
T ss_pred             EEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcc
Confidence            999999999999999999999999985  8899999999999999999888                    889999997


Q ss_pred             c--CeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         438 E--LVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       438 ~--~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .  .|++++|  ++++|++++.||.|++||++
T Consensus       393 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          393 DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            6  9999999  78899999999999999986

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=6.6e-40  Score=311.39  Aligned_cols=298  Identities=25%  Similarity=0.463  Sum_probs=248.6

Q ss_pred             CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCC
Q psy9182         125 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGG  204 (486)
Q Consensus       125 dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~  204 (486)
                      +..+..|+..+..+.+++.+|.+.|.+++|+               +++.+|++++.|++|++||+.+....        
T Consensus        45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~s---------------p~~~~l~s~s~D~~v~iWd~~~~~~~--------  101 (380)
T 3iz6_a           45 GRTAVSFNPTDLVCCRTLQGHSGKVYSLDWT---------------PEKNWIVSASQDGRLIVWNALTSQKT--------  101 (380)
T ss_dssp             GGGCCCCCCCCCEEEEEECCCSSCEEEEEEC---------------TTSSCEEEEETTSEEEEEETTTTEEE--------
T ss_pred             cccccccccceeEEeecccccccEEEEEEEc---------------CCCCEEEEEeCCCeEEEEECCCCccc--------
Confidence            3456678888888899999999999999998               68889999999999999997543321        


Q ss_pred             CCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce-------eeEEEcCCcccE
Q psy9182         205 GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-------CIKVLTGHTGSV  277 (486)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~~v  277 (486)
                                          ..+..+ ......++++++++++++|+.|+.+++||+.+..       ....+.+|.+.|
T Consensus       102 --------------------~~~~~h-~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v  160 (380)
T 3iz6_a          102 --------------------HAIKLH-CPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYA  160 (380)
T ss_dssp             --------------------EEEECC-CTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCC
T ss_pred             --------------------eEEecC-CCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcce
Confidence                                112211 2233445788899999999999999999986532       345677899999


Q ss_pred             EEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe-----cccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCc
Q psy9182         278 LCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL-----IHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNE  346 (486)
Q Consensus       278 ~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~  346 (486)
                      .++.|   ++..|++|+.|++|++||+++++.+..+     .+|...|.++.+++   +.+++|+.|+.|++||++....
T Consensus       161 ~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~  240 (380)
T 3iz6_a          161 SSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR  240 (380)
T ss_dssp             CCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC
T ss_pred             EEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc
Confidence            98888   3567999999999999999999998877     56888999999953   5999999999999999985432


Q ss_pred             eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-------cEEEEEe--CCCEEEEEeC
Q psy9182         347 ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-------GIACLQY--RDRLVVSGSS  415 (486)
Q Consensus       347 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~--~~~~l~~~~~  415 (486)
                        ....+.+|...|.++.|  ++++|++++.|++|++||+++++.+..+..+..       .+.+++|  ++++|++|+.
T Consensus       241 --~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~  318 (380)
T 3iz6_a          241 --AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS  318 (380)
T ss_dssp             --CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred             --ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence              22566789999999999  789999999999999999999999888865432       3667777  5899999999


Q ss_pred             CCcEEEEECCCCeeeEEe----cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         416 DNTIRLWDIECGACLRVL----EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       416 dg~v~iwd~~~~~~~~~~----~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ||.|++||+.+++.+..+    .+|...|++++|  ++.+|++|+.||+|++|++....
T Consensus       319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            999999999999988887    689999999999  89999999999999999998653

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=5e-38  Score=305.33  Aligned_cols=287  Identities=33%  Similarity=0.673  Sum_probs=256.3

Q ss_pred             cccccccceeeecCcccce-eEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCC
Q psy9182         131 WNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPS  209 (486)
Q Consensus       131 Wd~~~~~~~~~l~~h~~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~  209 (486)
                      |.....+....+.+|.+.| .++.+                 ++.++++++.||+|++||+.++...             
T Consensus       103 w~~~~~~~~~~l~~h~~~v~~~~~~-----------------~g~~l~sg~~dg~i~vwd~~~~~~~-------------  152 (445)
T 2ovr_B          103 WRRGELKSPKVLKGHDDHVITCLQF-----------------CGNRIVSGSDDNTLKVWSAVTGKCL-------------  152 (445)
T ss_dssp             HHHSCCCCCEEEECSTTSCEEEEEE-----------------ETTEEEEEETTSCEEEEETTTCCEE-------------
T ss_pred             ccCCCcceeEEecccCCCcEEEEEE-----------------cCCEEEEEECCCcEEEEECCCCcEE-------------
Confidence            4444445677889998875 66665                 4556888888999999998553321             


Q ss_pred             CcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEE
Q psy9182         210 GPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS  289 (486)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  289 (486)
                                        .....+...+.++.++++.+++|+.||.|++||+.+++.+..+.+|...|.++.++++.+++
T Consensus       153 ------------------~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s  214 (445)
T 2ovr_B          153 ------------------RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVS  214 (445)
T ss_dssp             ------------------EECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred             ------------------EEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEE
Confidence                              11235677888899999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCE
Q psy9182         290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY  369 (486)
Q Consensus       290 ~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  369 (486)
                      |+.||.|++||+.+++.+..+..|...+.++.++++.+++|+.||.|++||+++++..   ..+.+|...+.++.+++.+
T Consensus       215 ~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~  291 (445)
T 2ovr_B          215 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL---HTLQGHTNRVYSLQFDGIH  291 (445)
T ss_dssp             EETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE---EEECCCSSCEEEEEECSSE
T ss_pred             EeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEe---EEecCCCCceEEEEECCCE
Confidence            9999999999999999999999999999999998889999999999999999887544   5566899999999999999


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEec
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRFD  446 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~~  446 (486)
                      +++++.|+.|++||+++++.+..+.+|...+.++.++++++++|+.||.|++||+++++.+..+..   |...|.+++|+
T Consensus       292 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~  371 (445)
T 2ovr_B          292 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN  371 (445)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred             EEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC
Confidence            999999999999999999999999999999999999999999999999999999999999999986   88899999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCC
Q psy9182         447 AKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       447 ~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +++|++|+.||.|++||+.++.
T Consensus       372 ~~~l~s~~~dg~v~iwd~~~~~  393 (445)
T 2ovr_B          372 KNFVITSSDDGTVKLWDLKTGE  393 (445)
T ss_dssp             SSEEEEEETTSEEEEEETTTCC
T ss_pred             CCEEEEEeCCCeEEEEECCCCc
Confidence            9999999999999999998764

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7e-38  Score=290.07  Aligned_cols=275  Identities=23%  Similarity=0.422  Sum_probs=237.0

Q ss_pred             ccccccccccCCccCc-ceEEEeecCceeeeccccc-----ccceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSS-----CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~-----~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|...|.+++++|++ ++|++|+.||+|++||+.+     +..+..+.+|...|.+++|+                   
T Consensus        14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s-------------------   74 (319)
T 3frx_A           14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLT-------------------   74 (319)
T ss_dssp             CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEEC-------------------
T ss_pred             ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEEC-------------------
Confidence            4678889999999865 8999999999999999864     34567788888888877763                   


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                                                                                         ++++++++|+.|+
T Consensus        75 -------------------------------------------------------------------~dg~~l~s~s~D~   87 (319)
T 3frx_A           75 -------------------------------------------------------------------ADGAYALSASWDK   87 (319)
T ss_dssp             -------------------------------------------------------------------TTSSEEEEEETTS
T ss_pred             -------------------------------------------------------------------CCCCEEEEEeCCC
Confidence                                                                               4667899999999


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-------
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-------  325 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-------  325 (486)
                      +|++||+.+++.+..+.+|...|.++++  ++.++++|+.||.|++||++ ++.+..+.+|...+.++.+.+.       
T Consensus        88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~  166 (319)
T 3frx_A           88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDS  166 (319)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------C
T ss_pred             EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence            9999999999999999999999999999  67899999999999999996 5677888899999999999763       


Q ss_pred             -eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182         326 -MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       326 -~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~  402 (486)
                       .+++++.|+.|++||+++.+.   ...+.+|...|.++.+  ++++|++++.|+.|++||+.+++.+..+..+ ..+.+
T Consensus       167 ~~l~s~~~d~~i~~wd~~~~~~---~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~  242 (319)
T 3frx_A          167 VTIISAGNDKMVKAWNLNQFQI---EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFS  242 (319)
T ss_dssp             CEEEEEETTSCEEEEETTTTEE---EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEE
T ss_pred             cEEEEEeCCCEEEEEECCcchh---heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEE
Confidence             799999999999999987653   3556789999999999  7899999999999999999999999988864 57888


Q ss_pred             EEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC--------cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         403 LQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG--------HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       403 ~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++|+  +.++++++. +.+++|++..+..+..+..        |...+.+++|  ||++|++|+.||.|++||+.++
T Consensus       243 ~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          243 LAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             EEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             EEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            8884  778887775 4599999998877776643        4567899999  8999999999999999998754

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=5.6e-38  Score=299.53  Aligned_cols=295  Identities=26%  Similarity=0.422  Sum_probs=238.3

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...|.++.|+|||++||+|+ ++.++||++.+++.+..+..|.........                     +.... 
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~---------------------~~~~~-  118 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPEN---------------------LNTSS-  118 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------------------------
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccc---------------------ccccc-
Confidence            3677899999999999999986 689999999999988887766432110000                     00000 


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                    ..........+++++++++|++|+.||.|++||+
T Consensus       119 ----------------------------------------------~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~  152 (393)
T 1erj_A          119 ----------------------------------------------SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDI  152 (393)
T ss_dssp             ------------------------------------------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             ----------------------------------------------cCCCceeEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence                                                          0000111234567789999999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC---CeEEEEeCCCcE
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSI  336 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i  336 (486)
                      .+++.+..+.+|...|.+++|  ++++|++++.|++|++||+++++....+.. ...+.++++++   .++++|+.|+.|
T Consensus       153 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~s~d~~v  231 (393)
T 1erj_A          153 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSPGDGKYIAAGSLDRAV  231 (393)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSTTCCEEEEEETTSCE
T ss_pred             CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc-CCCcEEEEEECCCCCEEEEEcCCCcE
Confidence            999999999999999999999  788999999999999999999988877754 56788999875   489999999999


Q ss_pred             EEEECCCCCceeeEE----eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc------------eEEEEEcCCcc
Q psy9182         337 AVWDMVSPNEITLRR----VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC------------EFVRTLNGHKR  398 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~----~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~------------~~~~~~~~~~~  398 (486)
                      ++||++++.......    ...+|...|.++.|  ++++|++++.|+.|++||+++.            .+...+.+|..
T Consensus       232 ~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~  311 (393)
T 1erj_A          232 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD  311 (393)
T ss_dssp             EEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSS
T ss_pred             EEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC
Confidence            999999876543221    12578899999999  7899999999999999998753            34567789999


Q ss_pred             cEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec--------CCEEEEEeCCCcEEEEeCCC
Q psy9182         399 GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--------AKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       399 ~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~--------~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .|.++.++  +.+|++|+.||.|++||+++++++..+.+|...|.+++|.        +++|++|+.||+|++|++..
T Consensus       312 ~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          312 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence            99999984  7899999999999999999999999999999999999982        56899999999999999864

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.4e-38  Score=294.79  Aligned_cols=284  Identities=21%  Similarity=0.410  Sum_probs=226.1

Q ss_pred             cccc-cccccCCccCcceEEEeecCceeeeccccccccee---eecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         102 MLQR-DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVR---TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       102 ~~~~-~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~---~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      .|.. .+.+++++|+|++||+|+.||+|+|||+.+++...   ...+|...|.+++|+                      
T Consensus        13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~s----------------------   70 (345)
T 3fm0_A           13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS----------------------   70 (345)
T ss_dssp             CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEEC----------------------
T ss_pred             CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEEC----------------------
Confidence            3444 78899999999999999999999999998876432   236788888888885                      


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                                                                                      |++++|++|+.|+.++
T Consensus        71 ----------------------------------------------------------------p~g~~l~s~s~D~~v~   86 (345)
T 3fm0_A           71 ----------------------------------------------------------------PCGNYLASASFDATTC   86 (345)
T ss_dssp             ----------------------------------------------------------------TTSSEEEEEETTSCEE
T ss_pred             ----------------------------------------------------------------CCCCEEEEEECCCcEE
Confidence                                                                            3445566666666666


Q ss_pred             EEECCCc--eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc---EEEEecccCccEEEEEEcCC--eEE
Q psy9182         258 VWDRVSL--QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE---MVNTLIHHCEAVLHLRFSNG--MMV  328 (486)
Q Consensus       258 i~d~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~i~~~~~~~~--~l~  328 (486)
                      +||...+  +++..+.+|...|.+++|  ++++|++|+.|+.|++||++++.   .+..+..|...|.+++|+++  +++
T Consensus        87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~  166 (345)
T 3fm0_A           87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA  166 (345)
T ss_dssp             EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred             EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence            6665544  456778899999999999  78999999999999999998763   45677889999999999864  899


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC---------------ceEEE
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS---------------CEFVR  391 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~---------------~~~~~  391 (486)
                      +++.|+.|++||.+.++.. ....+.+|...|.+++|  ++++|++++.|++|++||...               .+++.
T Consensus       167 s~s~d~~i~~w~~~~~~~~-~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
T 3fm0_A          167 SASYDDTVKLYREEEDDWV-CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC  245 (345)
T ss_dssp             EEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred             EEeCCCcEEEEEecCCCEE-EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence            9999999999999876432 33567789999999999  789999999999999999632               23445


Q ss_pred             EEcC-CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe---------eeEEecCcccCeEEEEe--cC-CEEEEEeCC
Q psy9182         392 TLNG-HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRF--DA-KRIVSGAYD  456 (486)
Q Consensus       392 ~~~~-~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~---------~~~~~~~h~~~v~~~~~--~~-~~l~s~~~d  456 (486)
                      .+.+ |...|.+++|+  +..|++++.|+.|++|+...+.         ......+|...|++++|  ++ .+|++|+.|
T Consensus       246 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D  325 (345)
T 3fm0_A          246 TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD  325 (345)
T ss_dssp             EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT
T ss_pred             EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC
Confidence            5555 88899999995  7899999999999999987542         12234689999999999  44 589999999


Q ss_pred             CcEEEEeCCCCCCCCC
Q psy9182         457 GKIKVWNLVAALDPRA  472 (486)
Q Consensus       457 g~v~iwdl~~~~~~~~  472 (486)
                      |+|++|++....++..
T Consensus       326 g~v~~W~~~~~~~~~~  341 (345)
T 3fm0_A          326 GEVAFWKYQRPEGLHH  341 (345)
T ss_dssp             SCEEEEEECC------
T ss_pred             CcEEEEEecCCCCccc
Confidence            9999999998765543

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=5.6e-38  Score=306.79  Aligned_cols=310  Identities=25%  Similarity=0.479  Sum_probs=255.4

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...+++ +..+++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|++               ++ .+++++.
T Consensus       119 ~h~~~v~~-~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~---------------~~-~l~s~s~  181 (464)
T 3v7d_B          119 GHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH---------------GG-ILVSGST  181 (464)
T ss_dssp             CCSSSCEE-EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS---------------TT-EEEEEET
T ss_pred             CCCCCcEE-EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC---------------CC-EEEEEeC
Confidence            34444433 2334678999999999999999999999999999999999999962               33 7899999


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEE--EE--eCCCEEEEEecCCeEE
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYC--LQ--YDDHKIVSGLRDNTIK  257 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~--~~~~~l~~~~~dg~i~  257 (486)
                      ||+|++||+.++...                            ..+   ..+...+.+  +.  +++.++++|+.||.|+
T Consensus       182 dg~i~vwd~~~~~~~----------------------------~~~---~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~  230 (464)
T 3v7d_B          182 DRTVRVWDIKKGCCT----------------------------HVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH  230 (464)
T ss_dssp             TSCEEEEETTTTEEE----------------------------EEE---CCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred             CCCEEEEECCCCcEE----------------------------EEE---CCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence            999999998653321                            111   134444444  44  3568999999999999


Q ss_pred             EEECCCcee-----------------------eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         258 VWDRVSLQC-----------------------IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       258 i~d~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      +||+.++..                       +..+.+|...+.++..+++++++|+.||.|++||+++++.+..+..|.
T Consensus       231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~  310 (464)
T 3v7d_B          231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT  310 (464)
T ss_dssp             EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred             EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence            999987652                       556788999999999999999999999999999999999999999999


Q ss_pred             ccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         315 EAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       315 ~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      ..|.++.|+++  .+++|+.||.|++||+++++..   ..+.+|...|.++.++++++++++.||.|++||+.+++....
T Consensus       311 ~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~---~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~  387 (464)
T 3v7d_B          311 DRIYSTIYDHERKRCISASMDTTIRIWDLENGELM---YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS  387 (464)
T ss_dssp             SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE---EEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeee
Confidence            99999999864  9999999999999999887644   566789999999999999999999999999999999877666


Q ss_pred             Ec-CCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEecCCEEEEE-eCCCcEEEEe
Q psy9182         393 LN-GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFDAKRIVSG-AYDGKIKVWN  463 (486)
Q Consensus       393 ~~-~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~l~s~-~~dg~v~iwd  463 (486)
                      .. .+...+.++..+++++++|+ ||.|++||+++++.+.. +..|...|.+++|+++.++++ +.||.+.+|-
T Consensus       388 ~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~  460 (464)
T 3v7d_B          388 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI  460 (464)
T ss_dssp             EECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred             ecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEE
Confidence            54 33345667777899999998 89999999999999886 678899999999977776555 5566554443

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=4.4e-38  Score=318.54  Aligned_cols=363  Identities=17%  Similarity=0.234  Sum_probs=238.5

Q ss_pred             cccccc-ccccCCcc--CcceEEEeecCceeeecccccc--------cceeeecCcccceeEEEee--cceeEecCCC--
Q psy9182         101 PMLQRD-FISLLPNF--DEKYIVSASGDRTIKVWNTSSC--------EFVRTLNGHKRGIACLQYR--DRLVVSGSSD--  165 (486)
Q Consensus       101 ~~~~~~-~~~~~~s~--~~~~l~tg~~dg~v~iWd~~~~--------~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d--  165 (486)
                      ..|... |.++.++|  ++++|++|+.||.|++||+.++        +.+..+.+|...|.+++|+  ++.+++++.+  
T Consensus        60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~  139 (615)
T 1pgu_A           60 TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD  139 (615)
T ss_dssp             CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS
T ss_pred             ecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC
Confidence            346677 99999999  9999999999999999999855        6788889999999999997  4577777766  


Q ss_pred             --CceeccC-----------------------cc-eeecCCCCCcceeeecccccccccCCCCCC---CC-----CCC-C
Q psy9182         166 --NTIRYRD-----------------------EF-QIVSSSHDDTILIWDFLNYSETPIQGGGGG---GP-----PPS-G  210 (486)
Q Consensus       166 --~~i~~~~-----------------------~~-~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~---~~-----~~~-~  210 (486)
                        +.+.+++                       +. .+++++.|+.|++||+.+............   ..     .+. +
T Consensus       140 ~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  219 (615)
T 1pgu_A          140 NFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG  219 (615)
T ss_dssp             CSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC
T ss_pred             CccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCC
Confidence              3444433                       33 799999999999999866543322211110   00     000 0


Q ss_pred             cccccccccCceeE------EEEecc-C---CCccceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCc----c
Q psy9182         211 PSIENNWRMGKFLL------QRINCR-S---ENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT----G  275 (486)
Q Consensus       211 ~~~~~~~~~~~~~~------~~~~~~-~---~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~  275 (486)
                      ..+...-..+...+      ..+... .   .+...+.++.+ ++.++++++.||.|++||+.+++.+..+..+.    .
T Consensus       220 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~  299 (615)
T 1pgu_A          220 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN  299 (615)
T ss_dssp             CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG
T ss_pred             CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccC
Confidence            00000000000000      011122 1   34444445555 44455555555555555555555555555441    3


Q ss_pred             cEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE--------------------------------
Q psy9182         276 SVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--------------------------------  322 (486)
Q Consensus       276 ~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~--------------------------------  322 (486)
                      .+.++.+ +++++++++.||.|++||+.+++.+..+..|...|.+++|                                
T Consensus       300 ~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~  379 (615)
T 1pgu_A          300 QQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLD  379 (615)
T ss_dssp             CEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEE
T ss_pred             ceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEE
Confidence            3334433 4455555555555555555444444444444444443333                                


Q ss_pred             -c-CCeEEEEeCCCcEEEE-------------------------------------------------------------
Q psy9182         323 -S-NGMMVTCSKDRSIAVW-------------------------------------------------------------  339 (486)
Q Consensus       323 -~-~~~l~~~~~dg~i~i~-------------------------------------------------------------  339 (486)
                       . ++.+++++.|+.|++|                                                             
T Consensus       380 ~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  459 (615)
T 1pgu_A          380 NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV  459 (615)
T ss_dssp             CCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEE
T ss_pred             ECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEE
Confidence             1 1233333333333333                                                             


Q ss_pred             -------------ECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC-CcccEEEE
Q psy9182         340 -------------DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACL  403 (486)
Q Consensus       340 -------------d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~  403 (486)
                                   |+.+++...  ....+|...|.++.|  ++++|++++.|+.|++||+.+++.+..+.+ |...|+++
T Consensus       460 ~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~  537 (615)
T 1pgu_A          460 AVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAI  537 (615)
T ss_dssp             EEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEE
T ss_pred             EEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEE
Confidence                         333221110  344568889999999  889999999999999999999999999988 99999999


Q ss_pred             Ee------------CCCEEEEEeCCCcEEEEECCCC-eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         404 QY------------RDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       404 ~~------------~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .|            ++++|++++.||.|++||+.++ +++..+.+|...|++++|  ++. |++++.||.|++|++..
T Consensus       538 ~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          538 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             EECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred             EEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence            98            6789999999999999999998 888999999999999999  788 99999999999999874

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.1e-37  Score=301.89  Aligned_cols=273  Identities=89%  Similarity=1.448  Sum_probs=252.0

Q ss_pred             cccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeC
Q psy9182         213 IENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSS  292 (486)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~  292 (486)
                      ...+|..+......+..+..+...+.|++++++++++|+.||.|++||+.+++....+.+|...|.+++++++++++|+.
T Consensus       112 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~  191 (435)
T 1p22_A          112 IESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSS  191 (435)
T ss_dssp             HHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEET
T ss_pred             HHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcC
Confidence            34567777766677777778888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEE
Q psy9182         293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVS  372 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  372 (486)
                      ||.|++||+.+++.+..+..|...|.++.++++.+++|+.||.|++||+.++..........+|...|.++.++++++++
T Consensus       192 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s  271 (435)
T 1p22_A          192 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVS  271 (435)
T ss_dssp             TSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred             CCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999887766667788999999999999999999


Q ss_pred             EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEE
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVS  452 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s  452 (486)
                      ++.||.|++||+++++.+..+.+|...+.++.++++++++|+.||.|++||+++++++..+.+|...|.+++|++++|++
T Consensus       272 ~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s  351 (435)
T 1p22_A          272 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVS  351 (435)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEE
T ss_pred             EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCcEEEEeCCCCCCCCCCccccceeeeeec
Q psy9182         453 GAYDGKIKVWNLVAALDPRAPTTTLCLRTLVVS  485 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~~~~~~~~~~~~~~~~~~~  485 (486)
                      |+.||.|++||+..+..+..+....+..++.+|
T Consensus       352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h  384 (435)
T 1p22_A          352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH  384 (435)
T ss_dssp             EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred             EeCCCcEEEEECCCCCCccccccchheeeccCC
Confidence            999999999999887766666555566666544

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=6.4e-37  Score=285.92  Aligned_cols=317  Identities=17%  Similarity=0.266  Sum_probs=263.6

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .+...+.+++++|||++++++..++.+.+|+...........+|...|.+++|+               +++.++++++ 
T Consensus         7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---------------~~~~~l~~~~-   70 (337)
T 1gxr_A            7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTIS---------------NPTRHVYTGG-   70 (337)
T ss_dssp             EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEEC---------------SSSSEEEEEC-
T ss_pred             ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEe---------------cCCcEEEEcC-
Confidence            455678899999999999999988888888876655555556899999999997               5777888888 


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEec-cCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINC-RSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      ||.|++||+.+.......                         ..+.. ........++++++++++++++.||.|++||
T Consensus        71 dg~i~iw~~~~~~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d  125 (337)
T 1gxr_A           71 KGCVKVWDISHPGNKSPV-------------------------SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD  125 (337)
T ss_dssp             BSEEEEEETTSTTCCSCS-------------------------EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred             CCeEEEEECCCCCceeee-------------------------ecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence            999999998654321110                         11111 1123334455667899999999999999999


Q ss_pred             CCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCC
Q psy9182         261 RVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDR  334 (486)
Q Consensus       261 ~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg  334 (486)
                      +.+++  ....+..|...|.++.+  +++++++++.||.|++||+++++.+..+..|...+.++.|+++  .+++++.||
T Consensus       126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg  205 (337)
T 1gxr_A          126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN  205 (337)
T ss_dssp             CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC
Confidence            99877  66778889999999998  7789999999999999999999999999999999999999864  899999999


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV  410 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l  410 (486)
                      .|++||+++++....    ..+...+.++.+  +++++++++.++.|++||+++++. ..+..|...+.++.++  +++|
T Consensus       206 ~i~~~d~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l  280 (337)
T 1gxr_A          206 TVRSWDLREGRQLQQ----HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWF  280 (337)
T ss_dssp             EEEEEETTTTEEEEE----EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEE
T ss_pred             cEEEEECCCCceEee----ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEE
Confidence            999999998765432    236677888888  789999999999999999998775 4678899999999995  8899


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ++++.||.|++||+.+++.+... .|...|.+++|  ++++|++++.||.|++||+.
T Consensus       281 ~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  336 (337)
T 1gxr_A          281 VSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI  336 (337)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred             EEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence            99999999999999999887554 47889999999  88999999999999999973

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.1e-38  Score=303.04  Aligned_cols=289  Identities=23%  Similarity=0.343  Sum_probs=236.5

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++.++|++++|++|+.||+|+|||+.+++.+..+.+|...|.+++|+               +++.+|++++
T Consensus        63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s---------------~~g~~las~~  127 (380)
T 3iz6_a           63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFA---------------PNGQSVACGG  127 (380)
T ss_dssp             CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEEC---------------TTSSEEEECC
T ss_pred             cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEEC---------------CCCCEEEEee
Confidence            4578899999999999999999999999999999999999999999999999997               6888999999


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeC-CCEEEEEecCCeEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYD-DHKIVSGLRDNTIK  257 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~-~~~l~~~~~dg~i~  257 (486)
                      .|+.+++||+............                     .   ....+|...+.  .+.++ +..|++|+.|++|+
T Consensus       128 ~d~~v~iw~~~~~~~~~~~~~~---------------------~---~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~  183 (380)
T 3iz6_a          128 LDSACSIFNLSSQADRDGNMPV---------------------S---RVLTGHKGYASSCQYVPDQETRLITGSGDQTCV  183 (380)
T ss_dssp             SSSCCEEEECCCCSSCCCSSTT---------------------C---CBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEE
T ss_pred             CCCcEEEEECCCCccccCCccc---------------------e---eeccCCCcceEEEEEecCCCCEEEEECCCCcEE
Confidence            9999999998653211000000                     0   00112322232  23343 56799999999999


Q ss_pred             EEECCCceeeEEE-----cCCcccEEEEEe---cCCEEEEEeCCCcEEEEECC-CCcEEEEecccCccEEEEEEcCC--e
Q psy9182         258 VWDRVSLQCIKVL-----TGHTGSVLCLQY---DERVIISGSSDSTVRVWDVN-TGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       258 i~d~~~~~~~~~~-----~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      +||+.+++.+..+     .+|...|.++.+   +++++++|+.||.|++||++ .++.+..+.+|...|.+++|+|+  .
T Consensus       184 ~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~  263 (380)
T 3iz6_a          184 LWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR  263 (380)
T ss_dssp             EECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE
T ss_pred             EEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe
Confidence            9999999998887     678999999988   67899999999999999998 45778889999999999999865  8


Q ss_pred             EEEEeCCCcEEEEECCCCCceeeEEeee----cCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE----cCC
Q psy9182         327 MVTCSKDRSIAVWDMVSPNEITLRRVLV----GHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL----NGH  396 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~  396 (486)
                      +++|+.||.|++||+++++.........    .+...+.+++|  +++++++|+.||.|++||+.+++.+..+    .+|
T Consensus       264 l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h  343 (380)
T 3iz6_a          264 FGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSH  343 (380)
T ss_dssp             EEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSC
T ss_pred             EEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCC
Confidence            9999999999999999886553322111    12234677777  8999999999999999999999988887    689


Q ss_pred             cccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe
Q psy9182         397 KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       397 ~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      ...|.++.+  ++.+|++|+.||+|++|++...+
T Consensus       344 ~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          344 EGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             CCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             CCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            999999988  48899999999999999997654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.9e-39  Score=309.60  Aligned_cols=319  Identities=17%  Similarity=0.236  Sum_probs=259.2

Q ss_pred             cccccccCCccCcc-eEEEe----------ecCceeeecccccccc---eeeecCcccceeEEEeecceeEecCCCCcee
Q psy9182         104 QRDFISLLPNFDEK-YIVSA----------SGDRTIKVWNTSSCEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIR  169 (486)
Q Consensus       104 ~~~~~~~~~s~~~~-~l~tg----------~~dg~v~iWd~~~~~~---~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~  169 (486)
                      ...+.+++++|+++ +|++|          +.||.|+|||+.+++.   +..+ .|...|.+++|+              
T Consensus        12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s--------------   76 (416)
T 2pm9_A           12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWS--------------   76 (416)
T ss_dssp             EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEEC--------------
T ss_pred             hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEEC--------------
Confidence            35688999999997 99999          8999999999998863   3333 588899999997              


Q ss_pred             ccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCcc--ceEEEEeC-CCE
Q psy9182         170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK--GVYCLQYD-DHK  246 (486)
Q Consensus       170 ~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~-~~~  246 (486)
                       +++.+|++++.||.|++||+.+....                        ......   ...+..  ..++++++ +.+
T Consensus        77 -~~~~~l~~~~~dg~v~vw~~~~~~~~------------------------~~~~~~---~~~h~~~v~~~~~~~~~~~~  128 (416)
T 2pm9_A           77 -HNNKIIAGALDNGSLELYSTNEANNA------------------------INSMAR---FSNHSSSVKTVKFNAKQDNV  128 (416)
T ss_dssp             -SSSSCEEEEESSSCEEEECCSSTTSC------------------------CCEEEE---CCCSSSCCCEEEECSSSTTB
T ss_pred             -CCCCeEEEEccCCeEEEeeccccccc------------------------ccchhh---ccCCccceEEEEEcCCCCCE
Confidence             57888999999999999998542100                        001111   122333  34455666 889


Q ss_pred             EEEEecCCeEEEEECCCce------eeE---EEcCCcccEEEEEe--c-CCEEEEEeCCCcEEEEECCCCcEEEEeccc-
Q psy9182         247 IVSGLRDNTIKVWDRVSLQ------CIK---VLTGHTGSVLCLQY--D-ERVIISGSSDSTVRVWDVNTGEMVNTLIHH-  313 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~------~~~---~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-  313 (486)
                      +++++.||.|++||+.+++      ...   .+..|...|.+++|  + +.++++++.||.|++||+++++.+..+..+ 
T Consensus       129 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~  208 (416)
T 2pm9_A          129 LASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS  208 (416)
T ss_dssp             EEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC
T ss_pred             EEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc
Confidence            9999999999999999876      332   23678899999999  4 679999999999999999999999888776 


Q ss_pred             -----CccEEEEEEcCC---eEEEEeCCC---cEEEEECCCCCceeeEEeee-cCcccEEEEEe---CCCEEEEEeCCCc
Q psy9182         314 -----CEAVLHLRFSNG---MMVTCSKDR---SIAVWDMVSPNEITLRRVLV-GHRAAVNVVDF---DEKYIVSASGDRT  378 (486)
Q Consensus       314 -----~~~i~~~~~~~~---~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~---~~~~l~~~~~d~~  378 (486)
                           ...+.+++|+++   .+++++.|+   .|++||++++...  ...+. +|...|.++.|   ++++|++++.|+.
T Consensus       209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~  286 (416)
T 2pm9_A          209 PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT  286 (416)
T ss_dssp             CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred             cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCC
Confidence                 788999999864   799999998   9999999986432  24455 78999999998   6789999999999


Q ss_pred             EEEEECCCceEEEEEcCCcccEEEEEeC--C-CEEEEEeCCCcEEEEECCCCeeeEEec---------------------
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGACLRVLE---------------------  434 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~~~~~~~~~---------------------  434 (486)
                      |++||+++++.+..+..|...|.++.|+  + .+|++++.||.|++||+.+++......                     
T Consensus       287 v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (416)
T 2pm9_A          287 VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREE  366 (416)
T ss_dssp             EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------
T ss_pred             EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccc
Confidence            9999999999999999999999999985  4 799999999999999998765432211                     


Q ss_pred             --------------CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         435 --------------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       435 --------------~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                                    .|..++.+++|  +|++|++++.||.|+||++.++
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          367 SKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             cccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence                          15667777788  9999999999999999999864

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2.4e-37  Score=298.24  Aligned_cols=312  Identities=16%  Similarity=0.181  Sum_probs=254.1

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      ...++.++|++++|++|+.||.|++||+.+++....+..| ..+....|+               +++.+|++++.||.|
T Consensus        58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~---------------~~~~~l~~~~~dg~i  121 (420)
T 3vl1_A           58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAK---------------LQMRRFILGTTEGDI  121 (420)
T ss_dssp             CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEEC---------------SSSCEEEEEETTSCE
T ss_pred             cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEe---------------cCCCEEEEEECCCCE
Confidence            3557899999999999999999999999999888888777 233333444               577889999999999


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEECCC
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~  263 (486)
                      ++||+.+.....                               ....+...+  +++++++++|++|+.||.|++||+.+
T Consensus       122 ~iwd~~~~~~~~-------------------------------~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~  170 (420)
T 3vl1_A          122 KVLDSNFNLQRE-------------------------------IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD  170 (420)
T ss_dssp             EEECTTSCEEEE-------------------------------ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EEEeCCCcceee-------------------------------ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence            999975432211                               112344444  45566889999999999999999999


Q ss_pred             ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc---cCccEEEEEE----------------
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH---HCEAVLHLRF----------------  322 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---~~~~i~~~~~----------------  322 (486)
                      ++.+..+.+|...|.+++|  ++++|++++.||.|++||+++++.+..+..   +...+.++.+                
T Consensus       171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v  250 (420)
T 3vl1_A          171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK  250 (420)
T ss_dssp             CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred             CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence            9999999999999999999  788999999999999999999999988864   4556666665                


Q ss_pred             -----cC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEECCCceE-EE
Q psy9182         323 -----SN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWNTSSCEF-VR  391 (486)
Q Consensus       323 -----~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~~~~-~~  391 (486)
                           ++  ..+++++.||.|++||+++++...  .....|...+.++.|  ++. ++++++.||.|++||+++++. +.
T Consensus       251 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~  328 (420)
T 3vl1_A          251 NNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG  328 (420)
T ss_dssp             CTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE
T ss_pred             cceEEcCCCCEEEEEcCCCeEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh
Confidence                 33  389999999999999999887543  344568889999999  566 999999999999999998754 67


Q ss_pred             EEcC-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCC---------eeeEEecCcccCeEEEEe--cCC---EEEEEeC
Q psy9182         392 TLNG-HKRGIACLQY-RDRLVVSGSSDNTIRLWDIECG---------ACLRVLEGHEELVRCIRF--DAK---RIVSGAY  455 (486)
Q Consensus       392 ~~~~-~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~---------~~~~~~~~h~~~v~~~~~--~~~---~l~s~~~  455 (486)
                      .+.. |...+.++.+ ++++|++++.||.|++||+...         .....+..|...|.+++|  ++.   .|++++.
T Consensus       329 ~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~  408 (420)
T 3vl1_A          329 EFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK  408 (420)
T ss_dssp             EEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred             hhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence            7776 6677888876 4789999999999999998763         223346678889999999  777   7888888


Q ss_pred             CCcEEEEeCCC
Q psy9182         456 DGKIKVWNLVA  466 (486)
Q Consensus       456 dg~v~iwdl~~  466 (486)
                      +|.+.+|+++.
T Consensus       409 ~g~~~~~~~~~  419 (420)
T 3vl1_A          409 NNFCALYNLSN  419 (420)
T ss_dssp             TTEEEEEESCC
T ss_pred             CceEEEEeccC
Confidence            99999999864

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-36  Score=283.52  Aligned_cols=287  Identities=20%  Similarity=0.367  Sum_probs=223.5

Q ss_pred             cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccc
Q psy9182         135 SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIE  214 (486)
Q Consensus       135 ~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~  214 (486)
                      +.+++.++.+|...|.+++|++.                 +|++++.|++|++||+.....                   
T Consensus         3 ~~~~~~~~~~h~~~v~~~~~s~~-----------------~las~~~D~~i~lw~~~~~~~-------------------   46 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSFDFSQG-----------------ILATGSTDRKIKLVSVKYDDF-------------------   46 (330)
T ss_dssp             CCEEEEEEECCSSCEEEEEEETT-----------------EEEEEESSSCEEEEECSSSCC-------------------
T ss_pred             ccccceeeccCCCceeeeccCCC-----------------EEEEEcCCCEEEEEEecCCCe-------------------
Confidence            45678889999999999999742                 588888999999999754210                   


Q ss_pred             cccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEECC-------CceeeEEEcCCcccEEEEEe--c
Q psy9182         215 NNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRV-------SLQCIKVLTGHTGSVLCLQY--D  283 (486)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~--~  283 (486)
                             .....+. ...|...+  ++++|++++|++|+.|+.|++||..       ..+.+..+.+|...|.+++|  +
T Consensus        47 -------~~~~~~~-~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~  118 (330)
T 2hes_X           47 -------TLIDVLD-ETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND  118 (330)
T ss_dssp             -------EEEEEEC-TTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT
T ss_pred             -------EEEEEEe-cCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC
Confidence                   0111111 11144444  5566789999999999999999984       34567788999999999999  7


Q ss_pred             CCEEEEEeCCCcEEEEECCC----CcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCc
Q psy9182         284 ERVIISGSSDSTVRVWDVNT----GEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR  357 (486)
Q Consensus       284 ~~~l~~~~~dg~i~vwd~~~----~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~  357 (486)
                      +++|++|+.|++|++||++.    .+++..+..|...|.++.|+|+  +|++++.|+.|++||...+.. .....+.+|.
T Consensus       119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~-~~~~~~~~h~  197 (330)
T 2hes_X          119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW-ECVAVLNGHE  197 (330)
T ss_dssp             SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCS
T ss_pred             CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe-eEEEEccCCC
Confidence            89999999999999999943    2567788899999999999864  899999999999999876531 2345677899


Q ss_pred             ccEEEEEe--C--CCEEEEEeCCCcEEEEECCCc--------eEEEEEcC-CcccEEEEEeC-CCEEEEEeCCCcEEEEE
Q psy9182         358 AAVNVVDF--D--EKYIVSASGDRTIKVWNTSSC--------EFVRTLNG-HKRGIACLQYR-DRLVVSGSSDNTIRLWD  423 (486)
Q Consensus       358 ~~v~~~~~--~--~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~-~~~~v~~~~~~-~~~l~~~~~dg~v~iwd  423 (486)
                      ..|.++.|  +  +.++++++.|++|++||++.+        .....+.. |...|.+++|+ +.+|++++.||.|++||
T Consensus       198 ~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~  277 (330)
T 2hes_X          198 GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYE  277 (330)
T ss_dssp             SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred             CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEE
Confidence            99999999  3  568999999999999998764        44555555 88999999996 66899999999999999


Q ss_pred             CCCCe--eeEE-ecCccc-CeEEEEe----cCCEEEEEeCCCcEEEEeCCC
Q psy9182         424 IECGA--CLRV-LEGHEE-LVRCIRF----DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       424 ~~~~~--~~~~-~~~h~~-~v~~~~~----~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ..+++  .+.. +.+|.. .|.+++|    ++++|++|+.||+|++||++.
T Consensus       278 ~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          278 EVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             cCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            98874  3333 367877 8999999    367899999999999999874

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.2e-37  Score=340.10  Aligned_cols=365  Identities=23%  Similarity=0.409  Sum_probs=293.1

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeec----ceeEecCCCCceecc------
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRYR------  171 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~----~~~~~~~~d~~i~~~------  171 (486)
                      .|...|.++.++|++++|++|+.||.|+|||+.+++.+..+.+|...|.+++|++    ..+++++.|+.+++|      
T Consensus       655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~  734 (1249)
T 3sfz_A          655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE  734 (1249)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS
T ss_pred             cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc
Confidence            5678899999999999999999999999999999999999999999999999965    378899999988864      


Q ss_pred             -------------------CcceeecCCCCCcceeeecccccccccCCCCCC------------------CCCCCCcc--
Q psy9182         172 -------------------DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGG------------------GPPPSGPS--  212 (486)
Q Consensus       172 -------------------~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~------------------~~~~~~~~--  212 (486)
                                         ++..+++++.||.|++||+.+............                  .....+..  
T Consensus       735 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~  814 (1249)
T 3sfz_A          735 CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKII  814 (1249)
T ss_dssp             EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEE
T ss_pred             hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEE
Confidence                               467899999999999999977643222111000                  00000000  


Q ss_pred             -----cccccccCc-eeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cC
Q psy9182         213 -----IENNWRMGK-FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE  284 (486)
Q Consensus       213 -----~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~  284 (486)
                           ....|.... .....+...........++++++..+++++.||.|++||+.++..+..+.+|...|.+++|  ++
T Consensus       815 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg  894 (1249)
T 3sfz_A          815 VAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDG  894 (1249)
T ss_dssp             EEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS
T ss_pred             EEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCC
Confidence                 001111111 1122222233344556677889999999999999999999999999999999999999988  67


Q ss_pred             CEEEEEeCCCcEEEEECC--------------------------------------------------------------
Q psy9182         285 RVIISGSSDSTVRVWDVN--------------------------------------------------------------  302 (486)
Q Consensus       285 ~~l~~~~~dg~i~vwd~~--------------------------------------------------------------  302 (486)
                      +.+++++.||.|++||+.                                                              
T Consensus       895 ~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~  974 (1249)
T 3sfz_A          895 SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE  974 (1249)
T ss_dssp             SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSS
T ss_pred             CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCC
Confidence            888888888888888743                                                              


Q ss_pred             -----------------CCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEE
Q psy9182         303 -----------------TGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV  363 (486)
Q Consensus       303 -----------------~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~  363 (486)
                                       +++....+..|...|.+++|+++  .+++++.||.|++||+.+++..    ....|...+.++
T Consensus       975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~v~~~ 1050 (1249)
T 3sfz_A          975 YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV----FLQAHQETVKDF 1050 (1249)
T ss_dssp             EEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE----CCBCCSSCEEEE
T ss_pred             EEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE----EEecCCCcEEEE
Confidence                             23334445567778888888764  8899999999999999887543    345788899999


Q ss_pred             Ee-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe
Q psy9182         364 DF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV  440 (486)
Q Consensus       364 ~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v  440 (486)
                      .+ .+..+++++.|+.|++||+.+++....+.+|...|.++.+  +++++++++.||.|++||+.+++++..+.+|...|
T Consensus      1051 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v 1130 (1249)
T 3sfz_A         1051 RLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCV 1130 (1249)
T ss_dssp             EECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCE
T ss_pred             EEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcE
Confidence            99 5678899999999999999999999999999999998888  47899999999999999999999999999999999


Q ss_pred             EEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         441 RCIRF--DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       441 ~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      ++++|  ++++|++++.||.|++||+.++...
T Consensus      1131 ~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A         1131 RCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp             EEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred             EEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence            99999  8899999999999999999987643

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=3.8e-36  Score=281.19  Aligned_cols=292  Identities=24%  Similarity=0.414  Sum_probs=236.5

Q ss_pred             cccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcc
Q psy9182         133 TSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPS  212 (486)
Q Consensus       133 ~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~  212 (486)
                      .++.++..+|+||.+.|++++|+|              .++.+|+||+.|++|++||+.+.....               
T Consensus        25 ~~~~~l~~tL~GH~~~V~~v~~sp--------------~~~~~l~S~s~D~~i~vWd~~~~~~~~---------------   75 (340)
T 4aow_A           25 TEQMTLRGTLKGHNGWVTQIATTP--------------QFPDMILSASRDKTIIMWKLTRDETNY---------------   75 (340)
T ss_dssp             -CEEEEEEEECCCSSCEEEEEECT--------------TCTTEEEEEETTSCEEEEEECCSSSCS---------------
T ss_pred             CCceEEEEEECCccCCEEEEEEeC--------------CCCCEEEEEcCCCeEEEEECCCCCccc---------------
Confidence            345566778999999999999984              135789999999999999986532110               


Q ss_pred             cccccccCceeEEEEeccCCCccc--eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE
Q psy9182         213 IENNWRMGKFLLQRINCRSENSKG--VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII  288 (486)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~  288 (486)
                              ......+   .+|...  .+++++++++|++++.|+.|++|+............+...+....+  +++.++
T Consensus        76 --------~~~~~~l---~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  144 (340)
T 4aow_A           76 --------GIPQRAL---RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV  144 (340)
T ss_dssp             --------EEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred             --------ceeeEEE---eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccce
Confidence                    0111111   233444  4556678999999999999999999999998888888888877777  678999


Q ss_pred             EEeCCCcEEEEECCCCcEE-EEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEE
Q psy9182         289 SGSSDSTVRVWDVNTGEMV-NTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV  363 (486)
Q Consensus       289 ~~~~dg~i~vwd~~~~~~~-~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~  363 (486)
                      +++.|+.+++||+...... .....|...+..+.+.++    .+++++.|+.|++||+++++..   ..+.+|...|.++
T Consensus       145 s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~---~~~~~h~~~v~~~  221 (340)
T 4aow_A          145 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK---TNHIGHTGYLNTV  221 (340)
T ss_dssp             EEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEE
T ss_pred             eecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee---eEecCCCCcEEEE
Confidence            9999999999999866543 344678889999998743    7889999999999999887543   5667899999999


Q ss_pred             Ee--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEec------
Q psy9182         364 DF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLE------  434 (486)
Q Consensus       364 ~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~------  434 (486)
                      .|  ++++|++++.|+.|++||+++.+.+..+..+ ..+.++.+. +..+++++.|+.|++||++++..+..+.      
T Consensus       222 ~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  300 (340)
T 4aow_A          222 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVIST  300 (340)
T ss_dssp             EECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC----
T ss_pred             EECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceee
Confidence            98  7899999999999999999999999888765 568888885 5567778889999999999888776654      


Q ss_pred             ---CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         435 ---GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       435 ---~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                         +|...|++++|  ++++|++|+.||.|+|||+.++.
T Consensus       301 ~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          301 SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             ---CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             eccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence               67889999999  88999999999999999999764

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.8e-36  Score=277.36  Aligned_cols=227  Identities=26%  Similarity=0.465  Sum_probs=204.3

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      ++|+++++++|+.||.|++||+.+++.+..+..|...|.++.|  ++++|++|+.|+.|++||+.+++.+..+..|...|
T Consensus        21 fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v  100 (304)
T 2ynn_A           21 FHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI  100 (304)
T ss_dssp             ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             ECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcE
Confidence            3567888999999999999999999999999999999999988  78999999999999999999999999999999999


Q ss_pred             EEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         318 LHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       318 ~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      .+++|+++  ++++|+.|+.|++||++++...  ...+.+|...|.++.|   ++.++++|+.|+.|++||++++.....
T Consensus       101 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~  178 (304)
T 2ynn_A          101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT  178 (304)
T ss_dssp             EEEEECSSSSEEEEEETTSCEEEEEGGGTTEE--EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred             EEEEEcCCCCEEEEECCCCeEEEEECCCCcch--hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence            99999865  8999999999999999876543  3567789999999999   457999999999999999988877666


Q ss_pred             Ec-CCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         393 LN-GHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       393 ~~-~~~~~v~~~~~----~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +. +|...+..+.+    ++.+|++|+.|+.|++||+++++++..+.+|...|.+++|  ++.+|++|+.||+|++||+.
T Consensus       179 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~  258 (304)
T 2ynn_A          179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS  258 (304)
T ss_dssp             EECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred             eccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence            65 55677888877    3679999999999999999999999999999999999999  77899999999999999998


Q ss_pred             CCC
Q psy9182         466 AAL  468 (486)
Q Consensus       466 ~~~  468 (486)
                      +..
T Consensus       259 ~~~  261 (304)
T 2ynn_A          259 TYK  261 (304)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=7.1e-37  Score=286.46  Aligned_cols=274  Identities=19%  Similarity=0.377  Sum_probs=222.7

Q ss_pred             ccccccccccCC-----cc-CcceEEEeecCceeeecccccc-------cceeeecCcccceeEEEeecceeEecCCCCc
Q psy9182         101 PMLQRDFISLLP-----NF-DEKYIVSASGDRTIKVWNTSSC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNT  167 (486)
Q Consensus       101 ~~~~~~~~~~~~-----s~-~~~~l~tg~~dg~v~iWd~~~~-------~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~  167 (486)
                      ..|...|.++.+     ++ ++++|++|+.||+|++||+.++       .....+.+|...|.+++|+            
T Consensus        18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~------------   85 (343)
T 2xzm_R           18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS------------   85 (343)
T ss_dssp             ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC------------
T ss_pred             ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEEC------------
Confidence            357778888887     65 8999999999999999998753       3456677787777777763            


Q ss_pred             eeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182         168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI  247 (486)
Q Consensus       168 i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  247 (486)
                                                                                                +++.++
T Consensus        86 --------------------------------------------------------------------------~~~~~l   91 (343)
T 2xzm_R           86 --------------------------------------------------------------------------QENCFA   91 (343)
T ss_dssp             --------------------------------------------------------------------------SSTTEE
T ss_pred             --------------------------------------------------------------------------CCCCEE
Confidence                                                                                      456778


Q ss_pred             EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec---ccCccEEEEEE
Q psy9182         248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI---HHCEAVLHLRF  322 (486)
Q Consensus       248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~i~~~~~  322 (486)
                      ++|+.|++|++||+.+++.+..+.+|...|.+++|  ++++|++++.|+.|++||+.. .......   .|...+.++.|
T Consensus        92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~  170 (343)
T 2xzm_R           92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRY  170 (343)
T ss_dssp             EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEE
T ss_pred             EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeee
Confidence            89999999999999999999999999999999999  788999999999999999984 4443333   67888999999


Q ss_pred             cC------------CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC-c
Q psy9182         323 SN------------GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS-C  387 (486)
Q Consensus       323 ~~------------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~-~  387 (486)
                      ++            .++++++.|+.|++||...    .....+.+|...|.+++|  ++++|++++.|+.|++||+.. .
T Consensus       171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~  246 (343)
T 2xzm_R          171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT  246 (343)
T ss_dssp             CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred             ccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence            86            3699999999999999432    233556789999999999  789999999999999999954 4


Q ss_pred             eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeE--Eec-----------CcccCeEEEEe--cCCEE
Q psy9182         388 EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR--VLE-----------GHEELVRCIRF--DAKRI  450 (486)
Q Consensus       388 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~--~~~-----------~h~~~v~~~~~--~~~~l  450 (486)
                      .....+. +...|.+++|+  +.+++ ++.|+.|++||+.+++...  .+.           +|...|.+++|  ++++|
T Consensus       247 ~~~~~~~-~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l  324 (343)
T 2xzm_R          247 YPQREFD-AGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL  324 (343)
T ss_dssp             SCSEEEE-CSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred             ccceeec-CCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence            4444443 45568888885  56665 5568889999998776543  443           67888999999  88999


Q ss_pred             EEEeCCCcEEEEeCCCC
Q psy9182         451 VSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       451 ~s~~~dg~v~iwdl~~~  467 (486)
                      ++|+.||.|++|+++++
T Consensus       325 ~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          325 FAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             EEEETTSEEEEEEEEEE
T ss_pred             EEecCCceEEEEEEEcc
Confidence            99999999999998754

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-36  Score=317.36  Aligned_cols=344  Identities=10%  Similarity=0.132  Sum_probs=249.0

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecc-eeEecCCCCceeccC-------
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-LVVSGSSDNTIRYRD-------  172 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~-~~~~~~~d~~i~~~~-------  172 (486)
                      ..|...|.+++|+|++++||+|+.||.|+|||..+++....+. |...|.+++|++. ++++++.|++|++||       
T Consensus        14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~   92 (902)
T 2oaj_A           14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVL   92 (902)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEE
T ss_pred             cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEE
Confidence            3567789999999999999999999999999998877666554 7889999999854 588899999888754       


Q ss_pred             -----------------cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCcc
Q psy9182         173 -----------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK  235 (486)
Q Consensus       173 -----------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (486)
                                       +.++++|+.||.|++||+.+.......             +...|...       .....+..
T Consensus        93 ~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~-------------i~~~~~~~-------~~~~~h~~  152 (902)
T 2oaj_A           93 TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK-------------LDNLQKSS-------FFPAARLS  152 (902)
T ss_dssp             EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEE-------------ECCHHHHH-------TCSSSCCC
T ss_pred             EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccce-------------eccccccc-------cccccCCC
Confidence                             467888899999999998654321000             00000000       00122333


Q ss_pred             ce--EEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCC------------------cccEEEEEe--cCCEEEEEeC
Q psy9182         236 GV--YCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGH------------------TGSVLCLQY--DERVIISGSS  292 (486)
Q Consensus       236 ~v--~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------------~~~v~~~~~--~~~~l~~~~~  292 (486)
                      .+  ++++|+ +..+++|+.||.| +||+.+++.+..+..|                  ...|.+++|  ++++|++|+.
T Consensus       153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~  231 (902)
T 2oaj_A          153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE  231 (902)
T ss_dssp             CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred             CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence            44  445553 4689999999999 9999999999888766                  467999999  7899999999


Q ss_pred             CCcEEEEECCCCcEEEE--ec---c-------------cCccEEEEEEc----CC---eEEEEeCC-----CcEEEEE--
Q psy9182         293 DSTVRVWDVNTGEMVNT--LI---H-------------HCEAVLHLRFS----NG---MMVTCSKD-----RSIAVWD--  340 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~--~~---~-------------~~~~i~~~~~~----~~---~l~~~~~d-----g~i~i~d--  340 (486)
                      ||.|++||+++++++..  +.   .             +...|.+++|+    ++   .+++|+.+     ..+.+|+  
T Consensus       232 Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~  311 (902)
T 2oaj_A          232 DNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLG  311 (902)
T ss_dssp             TCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEE
T ss_pred             CCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecC
Confidence            99999999999887654  21   1             23468888883    22   45555443     2455555  


Q ss_pred             ---------------------------------------------------------------------CCCCCceee--
Q psy9182         341 ---------------------------------------------------------------------MVSPNEITL--  349 (486)
Q Consensus       341 ---------------------------------------------------------------------~~~~~~~~~--  349 (486)
                                                                                           +.++.....  
T Consensus       312 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~  391 (902)
T 2oaj_A          312 YTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKAS  391 (902)
T ss_dssp             ECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGG
T ss_pred             CCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccc
Confidence                                                                                 222110000  


Q ss_pred             --EEeeecCcccEEEEE----------------------------------e--CCCEEEEEeCCCcEEEEECCCceEE-
Q psy9182         350 --RRVLVGHRAAVNVVD----------------------------------F--DEKYIVSASGDRTIKVWNTSSCEFV-  390 (486)
Q Consensus       350 --~~~~~~~~~~v~~~~----------------------------------~--~~~~l~~~~~d~~i~iwd~~~~~~~-  390 (486)
                        ...+..|...|+++.                                  +  ++++|++|+.|++|++||+.++... 
T Consensus       392 ~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~  471 (902)
T 2oaj_A          392 LFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD  471 (902)
T ss_dssp             GSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT
T ss_pred             cCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccC
Confidence              000011122333322                                  2  5779999999999999999887421 


Q ss_pred             ---EE--Ec-----CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCC-------------------------------
Q psy9182         391 ---RT--LN-----GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG-------------------------------  427 (486)
Q Consensus       391 ---~~--~~-----~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~-------------------------------  427 (486)
                         ..  +.     +|...|.+++|+  +++||+|+.||+|+|||+.++                               
T Consensus       472 ~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  551 (902)
T 2oaj_A          472 NASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV  551 (902)
T ss_dssp             TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred             CceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence               11  11     788899999884  899999999999999999766                               


Q ss_pred             --------------eeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         428 --------------ACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       428 --------------~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                                    +++..+.+|.+.|++|+|  || +||+|+.|++|++||+++.
T Consensus       552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~  606 (902)
T 2oaj_A          552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP  606 (902)
T ss_dssp             ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT
T ss_pred             cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC
Confidence                          346788899999999999  88 9999999999999998754

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.2e-36  Score=308.16  Aligned_cols=322  Identities=15%  Similarity=0.258  Sum_probs=269.6

Q ss_pred             cccccccccccCCccCcceEEEeecCceeeecccccc----cceeeecCcccc-eeEEEeecceeEecCCCCceecc--C
Q psy9182         100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRYR--D  172 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~-V~~~~~~~~~~~~~~~d~~i~~~--~  172 (486)
                      +..+...+.+++++|++++|++++ ++.|+|||+.++    +.+..+.+|... |.+++|+               +  +
T Consensus        14 ~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~s---------------p~~~   77 (615)
T 1pgu_A           14 PSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFS---------------PIKG   77 (615)
T ss_dssp             CCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEEC---------------SSTT
T ss_pred             CCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEEC---------------cCCC
Confidence            345678899999999999999998 789999999999    899999999999 9999997               6  7


Q ss_pred             cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec
Q psy9182         173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR  252 (486)
Q Consensus       173 ~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~  252 (486)
                      +.+|++++.||.|++||+.++.....                    ........+.. .......++++++++++++++.
T Consensus        78 ~~~l~s~~~dg~v~vw~~~~~~~~~~--------------------~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~  136 (615)
T 1pgu_A           78 SQYLCSGDESGKVIVWGWTFDKESNS--------------------VEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGE  136 (615)
T ss_dssp             CCEEEEEETTSEEEEEEEEEEGGGTE--------------------EEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEEC
T ss_pred             CCEEEEecCCCEEEEEeCCCCccccc--------------------ccccccchhhc-ccccEEEEEEeCCCCEEEEecc
Confidence            88899999999999999864311000                    00011122221 2233445566778999999998


Q ss_pred             C----CeEEEEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCcEEEEecccCc---cEEEEEE
Q psy9182         253 D----NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGEMVNTLIHHCE---AVLHLRF  322 (486)
Q Consensus       253 d----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~i~~~~~  322 (486)
                      +    +.|.+||  .++.+..+.+|...|.++.|  +++ .+++++.||.|++||+.+++.+..+..|..   .|.+++|
T Consensus       137 ~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~  214 (615)
T 1pgu_A          137 GRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF  214 (615)
T ss_dssp             CSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred             CCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence            8    6888887  66788889999999999999  454 899999999999999999999999999998   9999999


Q ss_pred             cCC---eEEEEeCCCcEEEEECCCCCceeeEEee-e---cCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         323 SNG---MMVTCSKDRSIAVWDMVSPNEITLRRVL-V---GHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       323 ~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~---~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      +++   .+++++.||.|++||+.+++..   ..+ .   .|...|.++.| +++++++++.|+.|++||+++++.+..+.
T Consensus       215 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~  291 (615)
T 1pgu_A          215 SPDSGEFVITVGSDRKISCFDGKSGEFL---KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT  291 (615)
T ss_dssp             CSTTCCEEEEEETTCCEEEEETTTCCEE---EECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             CCCCCCEEEEEeCCCeEEEEECCCCCEe---EEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence            855   8999999999999999988754   333 4   78999999999 88999999999999999999999999988


Q ss_pred             CC----cccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182         395 GH----KRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       395 ~~----~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .+    ...+.++.+ +++++++++.||.|++||+.+++.+..+.+|...|++++| +. |++++.||.|++||+.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~  365 (615)
T 1pgu_A          292 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP-LISGSYDGRIMEWSSS  365 (615)
T ss_dssp             CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT-TEEEETTSCEEETTTT
T ss_pred             CCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC-cEEECCCCeEEEEEch
Confidence            77    355666666 6999999999999999999999999999999999999988 66 8888888888888865

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=4.3e-37  Score=335.77  Aligned_cols=339  Identities=23%  Similarity=0.373  Sum_probs=271.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccC------
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD------  172 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~------  172 (486)
                      ..|...|.+++++|++++|++|+.||+|++||+.+++.+.++.+|...|.+++|+  ++.+++++.|+.+++||      
T Consensus       612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~  691 (1249)
T 3sfz_A          612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL  691 (1249)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence            4577889999999999999999999999999999999999999999999999997  44677777777776643      


Q ss_pred             ---------------------cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccC
Q psy9182         173 ---------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS  231 (486)
Q Consensus       173 ---------------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (486)
                                           ...+++++.|+.|++||+.++....                            .+. .+
T Consensus       692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~----------------------------~~~-~h  742 (1249)
T 3sfz_A          692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN----------------------------TMF-GH  742 (1249)
T ss_dssp             EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE----------------------------EEC-CC
T ss_pred             EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh----------------------------eec-CC
Confidence                                 2246677777777777765433211                            111 11


Q ss_pred             CCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEE-----------------------------------------
Q psy9182         232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL-----------------------------------------  270 (486)
Q Consensus       232 ~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----------------------------------------  270 (486)
                      ......++++++++.+++++.||.|++||+.+++....+                                         
T Consensus       743 ~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~  822 (1249)
T 3sfz_A          743 TNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL  822 (1249)
T ss_dssp             SSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEE
T ss_pred             CCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEE
Confidence            122333455667778888888888888877665443322                                         


Q ss_pred             -------------c-CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182         271 -------------T-GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       271 -------------~-~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                                   . +|...|.++.+  ++.++++++.||.|++||+.++..+..+.+|...|.+++|+++  .+++++.
T Consensus       823 ~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~  902 (1249)
T 3sfz_A          823 LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASD  902 (1249)
T ss_dssp             EEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeC
Confidence                         1 57777888887  7899999999999999999999999999999999999999865  8999999


Q ss_pred             CCcEEEEECCCCCc------------------------------------------------------------------
Q psy9182         333 DRSIAVWDMVSPNE------------------------------------------------------------------  346 (486)
Q Consensus       333 dg~i~i~d~~~~~~------------------------------------------------------------------  346 (486)
                      ||.|++||+.+...                                                                  
T Consensus       903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~  982 (1249)
T 3sfz_A          903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED  982 (1249)
T ss_dssp             TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred             CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence            99999998542100                                                                  


Q ss_pred             ----------eeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEE
Q psy9182         347 ----------ITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSG  413 (486)
Q Consensus       347 ----------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~  413 (486)
                                ........+|...|.++.|  +++++++++.||.|++||+.+++.. .+..|...+.++.+. +..++++
T Consensus       983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~ 1061 (1249)
T 3sfz_A          983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRLLQDSRLLSW 1061 (1249)
T ss_dssp             SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEEEEEECSSSEEEEE
T ss_pred             CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE-EEecCCCcEEEEEEcCCCcEEEE
Confidence                      0011233467788888888  7889999999999999999998876 456899999999985 6789999


Q ss_pred             eCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         414 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       414 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      +.||.|++||+.+++.+..+.+|...|++++|  ++++|++++.||+|++||+.++..
T Consensus      1062 ~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~ 1119 (1249)
T 3sfz_A         1062 SFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP 1119 (1249)
T ss_dssp             ESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC
T ss_pred             ECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce
Confidence            99999999999999999999999999999999  888999999999999999987653

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-36  Score=317.92  Aligned_cols=345  Identities=13%  Similarity=0.109  Sum_probs=247.9

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccC--------
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD--------  172 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~--------  172 (486)
                      +...|.+++|+| +++|++++.|++|+|||+.+++.+..+. |...|++++|+  ++.+++++.|+.|++||        
T Consensus        57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~  134 (902)
T 2oaj_A           57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS  134 (902)
T ss_dssp             SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE
T ss_pred             CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence            456789999999 8899999999999999999999998886 66789999996  56899999999988764        


Q ss_pred             -----------------------------cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCcee
Q psy9182         173 -----------------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFL  223 (486)
Q Consensus       173 -----------------------------~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (486)
                                                   +..+++++.||.| +||+.+.....................        . 
T Consensus       135 ~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~--------~-  204 (902)
T 2oaj_A          135 FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFS--------E-  204 (902)
T ss_dssp             EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTC--------C-
T ss_pred             ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccc--------c-
Confidence                                         2468899999999 999976553322211100000000000        0 


Q ss_pred             EEEEeccCC--CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEE--E---cC-------------CcccEEEEEe-
Q psy9182         224 LQRINCRSE--NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV--L---TG-------------HTGSVLCLQY-  282 (486)
Q Consensus       224 ~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~---~~-------------~~~~v~~~~~-  282 (486)
                          .....  .....++++|++.+|++|+.||.|++||+.+++++..  +   ..             |...|.+++| 
T Consensus       205 ----~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~  280 (902)
T 2oaj_A          205 ----KTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWM  280 (902)
T ss_dssp             ----CTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEE
T ss_pred             ----ccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEE
Confidence                00111  2234456677899999999999999999998887653  2   11             2346777777 


Q ss_pred             ---cC---CEEEEEeCC---------------------------------------------------------------
Q psy9182         283 ---DE---RVIISGSSD---------------------------------------------------------------  293 (486)
Q Consensus       283 ---~~---~~l~~~~~d---------------------------------------------------------------  293 (486)
                         ++   .++++|+.|                                                               
T Consensus       281 ~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g  360 (902)
T 2oaj_A          281 CENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAG  360 (902)
T ss_dssp             ECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHH
T ss_pred             ecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCC
Confidence               21   345555333                                                               


Q ss_pred             -------------CcEEEEECCCCcEEEE-------ecccCccEEEEEE-------------------------------
Q psy9182         294 -------------STVRVWDVNTGEMVNT-------LIHHCEAVLHLRF-------------------------------  322 (486)
Q Consensus       294 -------------g~i~vwd~~~~~~~~~-------~~~~~~~i~~~~~-------------------------------  322 (486)
                                   |.|++||+.++.....       +..|...|.++++                               
T Consensus       361 ~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~s  440 (902)
T 2oaj_A          361 CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQ  440 (902)
T ss_dssp             TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCC
T ss_pred             CCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCc
Confidence                         3344444433322211       1112234544444                               


Q ss_pred             ---cC--CeEEEEeCCCcEEEEECCCCCcee--eEEe-e-----ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc
Q psy9182         323 ---SN--GMMVTCSKDRSIAVWDMVSPNEIT--LRRV-L-----VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       323 ---~~--~~l~~~~~dg~i~i~d~~~~~~~~--~~~~-~-----~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                         ++  ..+++|+.|++|++||+.++....  .... +     .+|...|.+++|  ++++||+|+.||+|++||+.++
T Consensus       441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~  520 (902)
T 2oaj_A          441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN  520 (902)
T ss_dssp             CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred             ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence               33  389999999999999998874321  1111 1     178889999999  8999999999999999998765


Q ss_pred             ---------------------------------------------eEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEE
Q psy9182         388 ---------------------------------------------EFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIR  420 (486)
Q Consensus       388 ---------------------------------------------~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~  420 (486)
                                                                   +++..+.+|.+.|++++++  | +||+|+.|++|+
T Consensus       521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~  599 (902)
T 2oaj_A          521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLM  599 (902)
T ss_dssp             CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEE
T ss_pred             cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEE
Confidence                                                         2467888999999999984  7 999999999999


Q ss_pred             EEECCCCeeeE--E---ec-CcccCeEEEEec----------CCEEEEEeCCCcEEEEeC
Q psy9182         421 LWDIECGACLR--V---LE-GHEELVRCIRFD----------AKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       421 iwd~~~~~~~~--~---~~-~h~~~v~~~~~~----------~~~l~s~~~dg~v~iwdl  464 (486)
                      +||++++..+.  .   +. +|...|++|+|.          +.+|++|+.||+|++||+
T Consensus       600 lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          600 LIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI  659 (902)
T ss_dssp             EEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred             EEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence            99999887664  2   32 899999999996          358999999999999999

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=5.3e-36  Score=287.32  Aligned_cols=225  Identities=32%  Similarity=0.560  Sum_probs=208.1

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEE
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL  318 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~  318 (486)
                      +|++.++++|+.||.|++||+.+++....+.+|...|.+++|  ++++|++|+.||+|++||+.+++++..+.+|...|.
T Consensus       117 ~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~  196 (410)
T 1vyh_C          117 HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS  196 (410)
T ss_dssp             CSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE
Confidence            356778999999999999999999999999999999999999  688999999999999999999999999999999999


Q ss_pred             EEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         319 HLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       319 ~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      +++|+++  .+++|+.|+.|++||++++...   ..+.+|...|.++.+  ++.++++++.|+.|++||+.+++....+.
T Consensus       197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~  273 (410)
T 1vyh_C          197 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR  273 (410)
T ss_dssp             EEEECSSSSEEEEEETTSEEEEEETTTCCEE---EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             EEEEeCCCCEEEEEeCCCeEEEEECCCCcEE---EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec
Confidence            9999864  8999999999999999988754   556789999999998  78999999999999999999999999999


Q ss_pred             CCcccEEEEEeC----------------------CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEE
Q psy9182         395 GHKRGIACLQYR----------------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI  450 (486)
Q Consensus       395 ~~~~~v~~~~~~----------------------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l  450 (486)
                      +|...|.++.|.                      +.+|++|+.|+.|++||+++++++..+.+|...|++++|  ++++|
T Consensus       274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l  353 (410)
T 1vyh_C          274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFI  353 (410)
T ss_dssp             CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCE
T ss_pred             CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEE
Confidence            999999999985                      458999999999999999999999999999999999999  78899


Q ss_pred             EEEeCCCcEEEEeCCCCC
Q psy9182         451 VSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       451 ~s~~~dg~v~iwdl~~~~  468 (486)
                      ++|+.||.|++||+.++.
T Consensus       354 ~s~s~D~~i~vwd~~~~~  371 (410)
T 1vyh_C          354 LSCADDKTLRVWDYKNKR  371 (410)
T ss_dssp             EEEETTTEEEEECCTTSC
T ss_pred             EEEeCCCeEEEEECCCCc
Confidence            999999999999997543

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.7e-36  Score=277.69  Aligned_cols=285  Identities=22%  Similarity=0.366  Sum_probs=220.4

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccc--cceeee-cC-cccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC--EFVRTL-NG-HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~--~~~~~l-~~-h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      ..|...|.++.++++  +||+|+.||+|++||+.++  +.+..+ .+ |...|.+++|+               +++.+|
T Consensus        11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~s---------------p~~~~l   73 (330)
T 2hes_X           11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWR---------------PHTSLL   73 (330)
T ss_dssp             ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEEC---------------TTSSEE
T ss_pred             ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEEC---------------CCCCEE
Confidence            356778999999877  9999999999999999875  445566 44 99999999998               577889


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCC
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg  254 (486)
                      ++++.|++|++||+.......                     ........   ...|...+  +++++++++|++|+.|+
T Consensus        74 as~s~D~~v~iw~~~~~~~~~---------------------~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D~  129 (330)
T 2hes_X           74 AAGSFDSTVSIWAKEESADRT---------------------FEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRDK  129 (330)
T ss_dssp             EEEETTSCEEEEEC----------------------------CCCEEEEE---EC----CEEEEEECTTSCEEEEEETTS
T ss_pred             EEEeCCCcEEEEEcccCcCcc---------------------ccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence            999999999999974321000                     00011111   22344444  45567899999999999


Q ss_pred             eEEEEECCC----ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC--cEEEEecccCccEEEEEEcCC-
Q psy9182         255 TIKVWDRVS----LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG--EMVNTLIHHCEAVLHLRFSNG-  325 (486)
Q Consensus       255 ~i~i~d~~~----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~i~~~~~~~~-  325 (486)
                      .|++||+..    .+++..+.+|...|.++.|  ++.+|++|+.|++|++||..++  +++..+.+|...|.++.|+++ 
T Consensus       130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  209 (330)
T 2hes_X          130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE  209 (330)
T ss_dssp             CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred             EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence            999999943    3567888999999999999  7889999999999999999876  678888999999999999874 


Q ss_pred             ---eEEEEeCCCcEEEEECCCCCc-----eeeEEeeec-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCce--EEEE-
Q psy9182         326 ---MMVTCSKDRSIAVWDMVSPNE-----ITLRRVLVG-HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE--FVRT-  392 (486)
Q Consensus       326 ---~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~--~~~~-  392 (486)
                         .+++|+.|+.|++||+..+..     ......+.+ |...|.++.| ++.++++++.||.|++||..+++  .... 
T Consensus       210 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~  289 (330)
T 2hes_X          210 GVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKR  289 (330)
T ss_dssp             SSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred             CeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecc
Confidence               789999999999999875421     112233333 8899999999 56689999999999999998774  3333 


Q ss_pred             EcCCcc-cEEEEEeC----CCEEEEEeCCCcEEEEECCC
Q psy9182         393 LNGHKR-GIACLQYR----DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       393 ~~~~~~-~v~~~~~~----~~~l~~~~~dg~v~iwd~~~  426 (486)
                      +.+|.. .|.+++|.    +++|++|+.||.|++||+++
T Consensus       290 ~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          290 ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            357876 89999884    57899999999999999864

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-35  Score=269.83  Aligned_cols=274  Identities=23%  Similarity=0.397  Sum_probs=229.4

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++++ +++.+|++|+.||.|++||+.+++....+..|...|.+++|+               ++        
T Consensus        15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~---------------~~--------   70 (313)
T 3odt_A           15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYD---------------SE--------   70 (313)
T ss_dssp             CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEE---------------TT--------
T ss_pred             hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEEC---------------CC--------
Confidence            457788999999 899999999999999999999999899999999999998885               23        


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                     ++++++++.||.|++|+
T Consensus        71 ---------------------------------------------------------------~~~l~~~~~dg~i~~~~   87 (313)
T 3odt_A           71 ---------------------------------------------------------------KELLLFGGKDTMINGVP   87 (313)
T ss_dssp             ---------------------------------------------------------------TTEEEEEETTSCEEEEE
T ss_pred             ---------------------------------------------------------------CCEEEEecCCCeEEEEE
Confidence                                                                           34455555555555555


Q ss_pred             CCC---ceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc---CCeEEEEeCCC
Q psy9182         261 RVS---LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDR  334 (486)
Q Consensus       261 ~~~---~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg  334 (486)
                      +..   .+.+..+.+|...|.++.++++++++++.||.|++||  .++....+..|...+.++.+.   ++.+++++.||
T Consensus        88 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~  165 (313)
T 3odt_A           88 LFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK  165 (313)
T ss_dssp             TTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred             eeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence            433   2445667789999999999999999999999999999  678888888899999998885   45999999999


Q ss_pred             cEEEEECCCCCceeeEEeeec-CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEE
Q psy9182         335 SIAVWDMVSPNEITLRRVLVG-HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVV  411 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~  411 (486)
                      .|++||...     ....... |...+.++.+ ....+++++.|+.|++||+++++.+..+.+|...+.++.++ ...++
T Consensus       166 ~i~i~d~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~  240 (313)
T 3odt_A          166 TIKLWQNDK-----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIV  240 (313)
T ss_dssp             CEEEEETTE-----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEE
T ss_pred             CEEEEecCc-----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEE
Confidence            999999322     2233344 8889999998 33349999999999999999999999999999999999996 23799


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      +++.||.|++||+++++.+..+..|...|.+++|  ++. +++++.||.|++||+.++..
T Consensus       241 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~  299 (313)
T 3odt_A          241 SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW  299 (313)
T ss_dssp             EEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred             EEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence            9999999999999999999999999999999999  555 77899999999999987654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.3e-35  Score=283.83  Aligned_cols=280  Identities=15%  Similarity=0.248  Sum_probs=234.3

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc------ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~------~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|...|.++.++|  ++|++|+.||.|++||+.+++      .+..+.+|...|.+++|++               +  
T Consensus        13 ~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---------------~--   73 (397)
T 1sq9_A           13 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ---------------A--   73 (397)
T ss_dssp             SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE---------------E--
T ss_pred             hhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec---------------c--
Confidence            45778899999988  799999999999999999988      7888999999999998863               1  


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC---CEEEEEe
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD---HKIVSGL  251 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~  251 (486)
                                                                                       ...++   .+|++++
T Consensus        74 -----------------------------------------------------------------~~~~g~~~~~l~s~~   88 (397)
T 1sq9_A           74 -----------------------------------------------------------------IERDAFELCLVATTS   88 (397)
T ss_dssp             -----------------------------------------------------------------EETTTEEEEEEEEEE
T ss_pred             -----------------------------------------------------------------cccCCccccEEEEEc
Confidence                                                                             00113   4555666


Q ss_pred             cCCeEEEEECCCcee-----eEEEcCC-----cccEEEEEec------CCE-EEEEeCCCcEEEEECCC------CcEEE
Q psy9182         252 RDNTIKVWDRVSLQC-----IKVLTGH-----TGSVLCLQYD------ERV-IISGSSDSTVRVWDVNT------GEMVN  308 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~-----~~~~~~~-----~~~v~~~~~~------~~~-l~~~~~dg~i~vwd~~~------~~~~~  308 (486)
                      .||.|++||+.+++.     ...+..|     ...|.++.|.      +++ |++++.||.|++||+++      ++.+.
T Consensus        89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  168 (397)
T 1sq9_A           89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN  168 (397)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred             CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence            666666666555554     6677777     5889888876      678 99999999999999988      65554


Q ss_pred             -----Ee-------cccCccEEEEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEeeec---C---cccEEEEEe--CC
Q psy9182         309 -----TL-------IHHCEAVLHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVG---H---RAAVNVVDF--DE  367 (486)
Q Consensus       309 -----~~-------~~~~~~i~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~---~~~v~~~~~--~~  367 (486)
                           .+       ..|...+.+++|+++ .+++++.||.|++||+++++..   ..+..   |   ...+.++.|  ++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~h~~~~~~i~~i~~~~~~  245 (397)
T 1sq9_A          169 WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPL---YNFESQHSMINNSNSIRSVKFSPQG  245 (397)
T ss_dssp             CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEE---EEEECCC---CCCCCEEEEEECSST
T ss_pred             ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCcee---EEEeccccccccCCccceEEECCCC
Confidence                 56       447888999999865 8999999999999999887544   44445   7   889999999  78


Q ss_pred             CEEEEEeCC---CcEEEEECCCceEEEEEcC-------------CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee
Q psy9182         368 KYIVSASGD---RTIKVWNTSSCEFVRTLNG-------------HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       368 ~~l~~~~~d---~~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      ++|++++.|   +.|++||+++++.+..+..             |...|.++.|+  +++|++++.||.|++||+++++.
T Consensus       246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  325 (397)
T 1sq9_A          246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER  325 (397)
T ss_dssp             TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred             CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence            999999999   9999999999999999998             99999999995  88999999999999999999999


Q ss_pred             eEEec------Cc---------------ccCeEEEEe--cC----------CEEEEEeCCCcEEEEeCCCC
Q psy9182         430 LRVLE------GH---------------EELVRCIRF--DA----------KRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       430 ~~~~~------~h---------------~~~v~~~~~--~~----------~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +..+.      +|               ...|++++|  ++          ++|++++.||.|++||+.++
T Consensus       326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            99999      88               999999999  55          69999999999999999764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=7.1e-36  Score=282.20  Aligned_cols=285  Identities=19%  Similarity=0.363  Sum_probs=237.0

Q ss_pred             hcccccccccccCCccC----cceEEEeecCceeeecccccccceeeecCc-----ccceeEEEeecceeEecCCCCcee
Q psy9182          99 LKPMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGH-----KRGIACLQYRDRLVVSGSSDNTIR  169 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h-----~~~V~~~~~~~~~~~~~~~d~~i~  169 (486)
                      +...|...|.++.++|+    ...+++++.++.|++||+.+++.+..+..|     ...|.+++|++..           
T Consensus        13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------   81 (366)
T 3k26_A           13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDS-----------   81 (366)
T ss_dssp             EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECT-----------
T ss_pred             eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCC-----------
Confidence            34567889999999984    556777777889999999998877776643     3556666664200           


Q ss_pred             ccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE
Q psy9182         170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS  249 (486)
Q Consensus       170 ~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  249 (486)
                                                                                             ..++.+|++
T Consensus        82 -----------------------------------------------------------------------~~~~~~l~~   90 (366)
T 3k26_A           82 -----------------------------------------------------------------------NTSHPLLAV   90 (366)
T ss_dssp             -----------------------------------------------------------------------TTCCEEEEE
T ss_pred             -----------------------------------------------------------------------CCCCCEEEE
Confidence                                                                                   002568999


Q ss_pred             EecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe---cccCccEEEEEEc
Q psy9182         250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFS  323 (486)
Q Consensus       250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~  323 (486)
                      |+.||.|++||+.+++.+..+.+|...|.++.|   ++++|++++.||.|++||+++++.+..+   ..|...|.+++|+
T Consensus        91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~  170 (366)
T 3k26_A           91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD  170 (366)
T ss_dssp             EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred             ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence            999999999999999999999999999999999   5689999999999999999999999888   6899999999998


Q ss_pred             CC--eEEEEeCCCcEEEEECCCCCcee-------------------------eEEeeecCcccEEEEEeCCCEEEEEeCC
Q psy9182         324 NG--MMVTCSKDRSIAVWDMVSPNEIT-------------------------LRRVLVGHRAAVNVVDFDEKYIVSASGD  376 (486)
Q Consensus       324 ~~--~l~~~~~dg~i~i~d~~~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~l~~~~~d  376 (486)
                      ++  .+++++.||.|++||+++++...                         .......|...|.++.|+++++++++.|
T Consensus       171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  250 (366)
T 3k26_A          171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCE  250 (366)
T ss_dssp             TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSS
T ss_pred             CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecC
Confidence            64  89999999999999998754321                         1122334889999999999999999999


Q ss_pred             CcEEEEECCCce--------------EEEEEcCCcccEEEEEe--C--CCEEEEEeCCCcEEEEECCCCe----eeEEec
Q psy9182         377 RTIKVWNTSSCE--------------FVRTLNGHKRGIACLQY--R--DRLVVSGSSDNTIRLWDIECGA----CLRVLE  434 (486)
Q Consensus       377 ~~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~v~iwd~~~~~----~~~~~~  434 (486)
                      +.|++||+.+++              .+..+..|...+.++.+  +  +++|++|+.||.|++||+.+++    ....+.
T Consensus       251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  330 (366)
T 3k26_A          251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT  330 (366)
T ss_dssp             SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC
T ss_pred             CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc
Confidence            999999988764              37788889888877766  5  8999999999999999999875    445777


Q ss_pred             Cc--ccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         435 GH--EELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       435 ~h--~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +|  ...|++++|  ++++|++++.||.|++||+.
T Consensus       331 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          331 HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            77  789999999  88999999999999999985

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-34  Score=272.92  Aligned_cols=280  Identities=17%  Similarity=0.285  Sum_probs=242.9

Q ss_pred             hhcccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182          98 YLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus        98 ~~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      ..-..|...|.++.++|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+                      
T Consensus        26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~----------------------   83 (369)
T 3zwl_B           26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVD----------------------   83 (369)
T ss_dssp             EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEEC----------------------
T ss_pred             EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEc----------------------
Confidence            3345678899999999999999999999999999999999999999999999998884                      


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                                                                                      +++++|++++.||.|+
T Consensus        84 ----------------------------------------------------------------~~~~~l~s~~~dg~i~   99 (369)
T 3zwl_B           84 ----------------------------------------------------------------CFTKYCVTGSADYSIK   99 (369)
T ss_dssp             ----------------------------------------------------------------TTSSEEEEEETTTEEE
T ss_pred             ----------------------------------------------------------------CCCCEEEEEeCCCeEE
Confidence                                                                            3556788888888899


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC-----CcEEEEECCCCc-----------EEEEecccCc--cE
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD-----STVRVWDVNTGE-----------MVNTLIHHCE--AV  317 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----g~i~vwd~~~~~-----------~~~~~~~~~~--~i  317 (486)
                      +||+.+++.+..+. +...+.++.|  +++++++++.+     |.|++||+.++.           ....+..+..  .+
T Consensus       100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (369)
T 3zwl_B          100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA  178 (369)
T ss_dssp             EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred             EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence            99988888888887 7888999988  78899999998     999999987653           2333444444  89


Q ss_pred             EEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         318 LHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       318 ~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      .+++|+++  .+++++.||.|++||+++...  ....+..|...|.++.|  ++++|++++.|+.|++||+++++.+..+
T Consensus       179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~  256 (369)
T 3zwl_B          179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY  256 (369)
T ss_dssp             EEEEECGGGCEEEEEETTSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             eEEEEcCCCCEEEEEcCCCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence            99999854  899999999999999988432  23556678999999999  7899999999999999999999998888


Q ss_pred             cCCcccEEEEEeC--CCEEEEEeCCC--------------cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182         394 NGHKRGIACLQYR--DRLVVSGSSDN--------------TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       394 ~~~~~~v~~~~~~--~~~l~~~~~dg--------------~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~  455 (486)
                      . +...+.++.++  ++++++++.++              .+++||+.+++.+..+.+|...|++++|  ++++|++++.
T Consensus       257 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  335 (369)
T 3zwl_B          257 E-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE  335 (369)
T ss_dssp             E-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             c-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence            8 67778888874  89999999988              8999999999999999999999999999  8899999999


Q ss_pred             CCcEEEEeCCCC
Q psy9182         456 DGKIKVWNLVAA  467 (486)
Q Consensus       456 dg~v~iwdl~~~  467 (486)
                      ||.|++|++..+
T Consensus       336 dg~v~iw~~~~~  347 (369)
T 3zwl_B          336 DGFIRLHHFEKS  347 (369)
T ss_dssp             TSEEEEEEECHH
T ss_pred             CCeEEEEECccc
Confidence            999999999864

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.3e-34  Score=277.16  Aligned_cols=281  Identities=21%  Similarity=0.388  Sum_probs=236.1

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecC-cccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~-h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      +.+..++.....++++..+++++.||.|++||+.+++....+.. |...|.+++|+                        
T Consensus        88 ~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s------------------------  143 (401)
T 4aez_A           88 PGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWS------------------------  143 (401)
T ss_dssp             TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEEC------------------------
T ss_pred             CCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEEC------------------------
Confidence            45555666656666677899999999999999999988777765 77778877774                        


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                                                                                    +++++|++|+.||.|++|
T Consensus       144 --------------------------------------------------------------~~~~~l~~~~~dg~i~iw  161 (401)
T 4aez_A          144 --------------------------------------------------------------HDGSFLSVGLGNGLVDIY  161 (401)
T ss_dssp             --------------------------------------------------------------TTSSEEEEEETTSCEEEE
T ss_pred             --------------------------------------------------------------CCCCEEEEECCCCeEEEE
Confidence                                                                          356778889999999999


Q ss_pred             ECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC-CCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN-TGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSI  336 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i  336 (486)
                      |+.+++.+..+.+|...|.+++|+++.+++++.||.|++||++ .+..+..+..|...|.++.|+++  .+++|+.|+.|
T Consensus       162 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v  241 (401)
T 4aez_A          162 DVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV  241 (401)
T ss_dssp             ETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE
Confidence            9999999999999999999999999999999999999999998 56778888999999999999864  89999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--C-CCEEEEEe--CCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--D-EKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRL  409 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~  409 (486)
                      ++||+++++..   ..+..|...|.++.|  + ..++++++  .|+.|++||+.+++.+..+. +...+.++.|+  +++
T Consensus       242 ~iwd~~~~~~~---~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~  317 (401)
T 4aez_A          242 QIWDARSSIPK---FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKE  317 (401)
T ss_dssp             EEEETTCSSEE---EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSE
T ss_pred             EEccCCCCCcc---EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCe
Confidence            99999987644   455678899999999  3 35677765  79999999999999998886 56779999884  788


Q ss_pred             EEEE--eCCCcEEEEECCCCeeeE--EecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCC
Q psy9182         410 VVSG--SSDNTIRLWDIECGACLR--VLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPR  471 (486)
Q Consensus       410 l~~~--~~dg~v~iwd~~~~~~~~--~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~  471 (486)
                      ++++  +.||.|++||+.+++...  .+.+|...|.+++|  ++.+|++++.||.|++||+.++....
T Consensus       318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~  385 (401)
T 4aez_A          318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVK  385 (401)
T ss_dssp             EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred             EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence            8884  489999999999876554  46789999999999  88999999999999999999876543

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=7.6e-35  Score=272.33  Aligned_cols=280  Identities=23%  Similarity=0.385  Sum_probs=228.5

Q ss_pred             ccccccccccCCccC-cceEEEeecCceeeeccccccc-----ceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFD-EKYIVSASGDRTIKVWNTSSCE-----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~~~~-----~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|...|.+++++|+ +++|+||+.||+|+|||+.+++     +.+.+.+|...|.+++|+               +++.
T Consensus        35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s---------------~dg~   99 (340)
T 4aow_A           35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS---------------SDGQ   99 (340)
T ss_dssp             CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEEC---------------TTSS
T ss_pred             CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEEC---------------CCCC
Confidence            468899999999997 6899999999999999987654     567889999999999997               6788


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      +|++++.|+.|++|+........                             .............+.+++..+++++.|+
T Consensus       100 ~l~s~~~d~~i~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~l~s~s~d~  150 (340)
T 4aow_A          100 FALSGSWDGTLRLWDLTTGTTTR-----------------------------RFVGHTKDVLSVAFSSDNRQIVSGSRDK  150 (340)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEE-----------------------------EEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred             EEEEEcccccceEEeecccceee-----------------------------eecCCCCceeEEEEeecCccceeecCCC
Confidence            89999999999999975432111                             1112233444556677889999999999


Q ss_pred             eEEEEECCCceee-EEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         255 TIKVWDRVSLQCI-KVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       255 ~i~i~d~~~~~~~-~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      .+++||....... ....+|...+.++.+    ...++++++.|+.|++||+++++.+..+..|...|.+++|+++  ++
T Consensus       151 ~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l  230 (340)
T 4aow_A          151 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC  230 (340)
T ss_dssp             CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEE
Confidence            9999998765543 445678899998887    2467899999999999999999999999999999999999864  89


Q ss_pred             EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEc---------CCc
Q psy9182         328 VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN---------GHK  397 (486)
Q Consensus       328 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~  397 (486)
                      ++|+.||.|++||+++.+...   .+. +...+.++.+ .+..+++++.|+.|++||++++..+..+.         +|.
T Consensus       231 ~s~s~Dg~i~iwd~~~~~~~~---~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~  306 (340)
T 4aow_A          231 ASGGKDGQAMLWDLNEGKHLY---TLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEP  306 (340)
T ss_dssp             EEEETTCEEEEEETTTTEEEE---EEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCC
T ss_pred             EEEeCCCeEEEEEeccCceee---eec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCC
Confidence            999999999999999876543   222 3457888888 45567777789999999999888776654         678


Q ss_pred             ccEEEEEeC--CCEEEEEeCCCcEEEEECCCCe
Q psy9182         398 RGIACLQYR--DRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       398 ~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      ..|++++|+  +++|++|+.||.|+|||+++|+
T Consensus       307 ~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          307 PQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            889999984  7899999999999999999886

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=5.1e-34  Score=274.77  Aligned_cols=279  Identities=20%  Similarity=0.403  Sum_probs=233.6

Q ss_pred             cccccccc--ccCCccCcceEEEeecCceeeecccccccceeeec--CcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         101 PMLQRDFI--SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       101 ~~~~~~~~--~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      |.+..|+.  .+.+|++ ++||+|. |++|+|||..+|+.+..+.  +|...|++++|+                     
T Consensus       100 p~~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fs---------------------  156 (420)
T 4gga_A          100 PEIRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWI---------------------  156 (420)
T ss_dssp             TTCCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEEC---------------------
T ss_pred             CCCcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEEC---------------------
Confidence            55555653  4567765 4677664 8999999999999877664  677788888884                     


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                                                                                       +++++|++|+.||.|
T Consensus       157 -----------------------------------------------------------------pdg~~lasgs~Dg~v  171 (420)
T 4gga_A          157 -----------------------------------------------------------------KEGNYLAVGTSSAEV  171 (420)
T ss_dssp             -----------------------------------------------------------------TTSSEEEEEETTSCE
T ss_pred             -----------------------------------------------------------------CCCCEEEEEECCCeE
Confidence                                                                             467789999999999


Q ss_pred             EEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC--CeEEEEeCC
Q psy9182         257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN--GMMVTCSKD  333 (486)
Q Consensus       257 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~--~~l~~~~~d  333 (486)
                      ++||+.+++.+..+.+|...+.++++++..+++|+.|+.+++||.... ..+..+..|...+..+.+.+  ..+++++.|
T Consensus       172 ~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D  251 (420)
T 4gga_A          172 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND  251 (420)
T ss_dssp             EEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc
Confidence            999999999999999999999999999999999999999999998864 45677889999999999985  499999999


Q ss_pred             CcEEEEECCCCCce-eeEEeeecCcccEEEEEe---CCCEEEEE--eCCCcEEEEECCCceEEEEEcCCcccEEEEEe--
Q psy9182         334 RSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF---DEKYIVSA--SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--  405 (486)
Q Consensus       334 g~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--  405 (486)
                      +.+++||...++.. ........|...|.++.|   ++..++++  +.|+.|++||+.++++...+..|.. +.++.+  
T Consensus       252 ~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~-v~~~~~~~  330 (420)
T 4gga_A          252 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ-VCSILWSP  330 (420)
T ss_dssp             SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC-EEEEEEET
T ss_pred             ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc-eeeeeecC
Confidence            99999999876532 223456678899999998   45676664  4799999999999999999887654 555555  


Q ss_pred             CCCEEEEEe--CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         406 RDRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       406 ~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +++.+++++  .|+.|+|||+.+++++..+.+|.+.|++++|  ||++|+||+.||+|+|||+....
T Consensus       331 ~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          331 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            477777655  7999999999999999999999999999999  89999999999999999997643

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-35  Score=285.02  Aligned_cols=321  Identities=14%  Similarity=0.215  Sum_probs=235.2

Q ss_pred             ccccccccccCCcc-CcceEEEeecCceeeeccccc---ccc---eeeecCcccceeEEEeecceeEecCCCCceeccCc
Q psy9182         101 PMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSS---CEF---VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE  173 (486)
Q Consensus       101 ~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~---~~~---~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~  173 (486)
                      ..|...|.+++++| ++++|++|+.||+|+|||+.+   +..   ...+ +|...|.+++|+               +++
T Consensus        60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~---------------~~~  123 (437)
T 3gre_A           60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMI---------------PNF  123 (437)
T ss_dssp             TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEEC---------------TTS
T ss_pred             cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEe---------------CCC
Confidence            34678899999999 999999999999999999987   432   2233 589999999997               577


Q ss_pred             ceeecCCCCCcceeeecccc---cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCC-CccceEEEE----eCCC
Q psy9182         174 FQIVSSSHDDTILIWDFLNY---SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSE-NSKGVYCLQ----YDDH  245 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~----~~~~  245 (486)
                      ..|++++.||.|++||++..   ......                    ....+..+..... +...+.++.    +++.
T Consensus       124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~--------------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (437)
T 3gre_A          124 DAFAVSSKDGQIIVLKVNHYQQESEVKFL--------------------NCECIRKINLKNFGKNEYAVRMRAFVNEEKS  183 (437)
T ss_dssp             SEEEEEETTSEEEEEEEEEEEETTEEEEE--------------------EEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred             CEEEEEeCCCEEEEEEeccccCCceeecc--------------------ccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence            78999999999999998521   111000                    0011222221110 333444443    5789


Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcC--CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-ccCccEEEE
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTG--HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHL  320 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~i~~~  320 (486)
                      ++++|+.||.|++||+.+++.+..+.+  |...|.+++|  ++++|++|+.||.|++||+++++++..+. .+...|.++
T Consensus       184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~  263 (437)
T 3gre_A          184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV  263 (437)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred             EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence            999999999999999999999999988  8899999999  78999999999999999999999998886 677899999


Q ss_pred             EEcCC------eEEEEeCCCcEEEEECCCCCceeeEEe---------------------eec--CcccEEEEEe-CCCEE
Q psy9182         321 RFSNG------MMVTCSKDRSIAVWDMVSPNEITLRRV---------------------LVG--HRAAVNVVDF-DEKYI  370 (486)
Q Consensus       321 ~~~~~------~l~~~~~dg~i~i~d~~~~~~~~~~~~---------------------~~~--~~~~v~~~~~-~~~~l  370 (486)
                      .+++.      .+++|+.||.|++||+++++.......                     +.+  |...|.++.+ ++++|
T Consensus       264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l  343 (437)
T 3gre_A          264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKIL  343 (437)
T ss_dssp             EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEE
T ss_pred             EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEE
Confidence            77643      899999999999999988765433221                     112  6677888888 66799


Q ss_pred             EEEeCCCcEEEEECCCceEEEEEcCCccc---EEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182         371 VSASGDRTIKVWNTSSCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--  445 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--  445 (486)
                      ++++.|+.|++||+.+++....+.+|...   .....+..........      |+...+........|...|++++|  
T Consensus       344 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~h~~~I~~i~~~~  417 (437)
T 3gre_A          344 LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK------MKRTSTHSVDDSLYHHDIINSISTCE  417 (437)
T ss_dssp             EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE------CC-------------CCCEEEEEEEE
T ss_pred             EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe------cccccccccCcccccccceeeEeeec
Confidence            99999999999999999999999887543   2333333222211111      334445555666789999999999  


Q ss_pred             c--CCEEEEEeCCCcEEEEe
Q psy9182         446 D--AKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       446 ~--~~~l~s~~~dg~v~iwd  463 (486)
                      +  +.+|++|+.||.|++|+
T Consensus       418 ~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          418 VDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             SSSSEEEEEEETTSCEEEEC
T ss_pred             cCCceEEEEEcCCceEEEeC
Confidence            4  56899999999999995

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=9.5e-35  Score=275.22  Aligned_cols=279  Identities=16%  Similarity=0.204  Sum_probs=228.7

Q ss_pred             cccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      .|...|.++.++|++++|++|+.||.|++||+.+++  .+..+.+|...|.+++|+                        
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~------------------------   61 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA------------------------   61 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEE------------------------
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEe------------------------
Confidence            467789999999999999999999999999999987  888999999999998885                        


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                                                                                    ++++++++++.||.|++|
T Consensus        62 --------------------------------------------------------------~~~~~l~~~~~dg~i~vw   79 (372)
T 1k8k_C           62 --------------------------------------------------------------PDSNRIVTCGTDRNAYVW   79 (372)
T ss_dssp             --------------------------------------------------------------TTTTEEEEEETTSCEEEE
T ss_pred             --------------------------------------------------------------CCCCEEEEEcCCCeEEEE
Confidence                                                                          244556666677777777


Q ss_pred             ECCCceeeEE--EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE---EE-EecccCccEEEEEEcCC--eEEE
Q psy9182         260 DRVSLQCIKV--LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM---VN-TLIHHCEAVLHLRFSNG--MMVT  329 (486)
Q Consensus       260 d~~~~~~~~~--~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~---~~-~~~~~~~~i~~~~~~~~--~l~~  329 (486)
                      |+.+++....  +..|...|.++.|  +++++++++.||.|++||++.++.   .. ....|...|.++.|+++  .+++
T Consensus        80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  159 (372)
T 1k8k_C           80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA  159 (372)
T ss_dssp             EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred             ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence            7666654433  3568889999998  788999999999999999988762   33 33667889999999864  8999


Q ss_pred             EeCCCcEEEEECCCCC---------------ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         330 CSKDRSIAVWDMVSPN---------------EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~---------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      ++.||.|++||++...               .......+.+|...+.++.|  ++++|++++.|+.|++||+++++.+..
T Consensus       160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  239 (372)
T 1k8k_C          160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT  239 (372)
T ss_dssp             EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred             EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence            9999999999965210               11233556688899999999  788999999999999999999999999


Q ss_pred             EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC--Cee--------------------------------e------
Q psy9182         393 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC--GAC--------------------------------L------  430 (486)
Q Consensus       393 ~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~--~~~--------------------------------~------  430 (486)
                      +..|...+.++.++  +.++++| .|+.|++|++.+  ++.                                .      
T Consensus       240 ~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (372)
T 1k8k_C          240 LASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG  318 (372)
T ss_dssp             EECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------
T ss_pred             EccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccc
Confidence            99999999999884  6666666 999999999987  421                                0      


Q ss_pred             EEe-cCcccCeEEEEe---cC---CEEEEEeCCCcEEEEeCCCC
Q psy9182         431 RVL-EGHEELVRCIRF---DA---KRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       431 ~~~-~~h~~~v~~~~~---~~---~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ..+ .+|...|++++|   +|   .+|++|+.||.|++||+.+.
T Consensus       319 ~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~  362 (372)
T 1k8k_C          319 AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL  362 (372)
T ss_dssp             CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             ccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence            223 489999999996   55   89999999999999998754

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=2e-34  Score=295.41  Aligned_cols=274  Identities=24%  Similarity=0.422  Sum_probs=228.9

Q ss_pred             ccccccccccCCccCc-ceEEEeecCceeeecccccc-----cceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSSC-----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~~-----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ..|...|.++++++++ ++|+||+.||+|++||+.+.     .....+.+|...|.+++|+                   
T Consensus       379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-------------------  439 (694)
T 3dm0_A          379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLS-------------------  439 (694)
T ss_dssp             ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEEC-------------------
T ss_pred             ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEEC-------------------
Confidence            3688899999999875 78999999999999998764     3356677888888777764                   


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                                                                                         +++++|++|+.||
T Consensus       440 -------------------------------------------------------------------~~g~~l~sgs~Dg  452 (694)
T 3dm0_A          440 -------------------------------------------------------------------SDGQFALSGSWDG  452 (694)
T ss_dssp             -------------------------------------------------------------------TTSSEEEEEETTS
T ss_pred             -------------------------------------------------------------------CCCCEEEEEeCCC
Confidence                                                                               4667889999999


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe---cccCccEEEEEEcCC----
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL---IHHCEAVLHLRFSNG----  325 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~i~~~~~~~~----  325 (486)
                      .|++||+.+++....+.+|...|.+++|  ++++|++|+.|++|++||..........   ..|...|.+++|+++    
T Consensus       453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  532 (694)
T 3dm0_A          453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP  532 (694)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred             cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence            9999999999999999999999999999  7889999999999999998755433332   457888999999864    


Q ss_pred             eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                      .+++++.|+.|++||+++.+..   ..+.+|...|.++.+  ++++|++++.|+.|++||+++++.+..+.. ...+.++
T Consensus       533 ~l~s~s~d~~v~vwd~~~~~~~---~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~  608 (694)
T 3dm0_A          533 TIVSASWDKTVKVWNLSNCKLR---STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHAL  608 (694)
T ss_dssp             EEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEE
T ss_pred             eEEEEeCCCeEEEEECCCCcEE---EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEE
Confidence            6999999999999999887643   567789999999999  789999999999999999999998887765 4568888


Q ss_pred             EeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcc-------------------cCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         404 QYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-------------------ELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       404 ~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-------------------~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      .++  +.+++++ .|+.|++||+++++.+..+..+.                   ..+++++|  ++++|++|+.||.|+
T Consensus       609 ~~sp~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~  687 (694)
T 3dm0_A          609 CFSPNRYWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR  687 (694)
T ss_dssp             EECSSSSEEEEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEcCCCcEEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence            885  5555554 56779999999999888775432                   13788999  899999999999999


Q ss_pred             EEeCC
Q psy9182         461 VWNLV  465 (486)
Q Consensus       461 iwdl~  465 (486)
                      +||+.
T Consensus       688 iW~i~  692 (694)
T 3dm0_A          688 VWGIG  692 (694)
T ss_dssp             EEEC-
T ss_pred             EEecc
Confidence            99985

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.1e-34  Score=264.66  Aligned_cols=235  Identities=23%  Similarity=0.429  Sum_probs=210.3

Q ss_pred             cCCCccceEEEEe------CCCEEEEEecCCeEEEEECCCcee--eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182         230 RSENSKGVYCLQY------DDHKIVSGLRDNTIKVWDRVSLQC--IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVW  299 (486)
Q Consensus       230 ~~~~~~~v~~~~~------~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vw  299 (486)
                      ...|...|.++.+      ++.+|++|+.|++|++||+..++.  ...+.+|...|.++++  ++..+++++.|++|++|
T Consensus        28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW  107 (321)
T 3ow8_A           28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW  107 (321)
T ss_dssp             TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred             cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence            3467777777765      356899999999999999877654  4568899999999998  67899999999999999


Q ss_pred             ECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182         300 DVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG  375 (486)
Q Consensus       300 d~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  375 (486)
                      |+.+++.+..+..+...+.+++|+++  .+++++.||.|++||+++++..   ..+..+...+.++.|  ++++|++++.
T Consensus       108 d~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~---~~~~~~~~~v~~~~~spdg~~lasg~~  184 (321)
T 3ow8_A          108 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE---YSLDTRGKFILSIAYSPDGKYLASGAI  184 (321)
T ss_dssp             ETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE---EEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred             ECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee---EEecCCCceEEEEEECCCCCEEEEEcC
Confidence            99999999999988888999999865  9999999999999999988654   445577888999988  8899999999


Q ss_pred             CCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182         376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV  451 (486)
Q Consensus       376 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~  451 (486)
                      |+.|++||+++++.+..+.+|...|.++.|+  +++|++|+.||.|++||+++++.+..+.+|...|.+++|  ++.+|+
T Consensus       185 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~  264 (321)
T 3ow8_A          185 DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV  264 (321)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE
Confidence            9999999999999999999999999999984  789999999999999999999999999999999999999  889999


Q ss_pred             EEeCCCcEEEEeCCCC
Q psy9182         452 SGAYDGKIKVWNLVAA  467 (486)
Q Consensus       452 s~~~dg~v~iwdl~~~  467 (486)
                      +++.||+|++||+.++
T Consensus       265 s~s~D~~v~iwd~~~~  280 (321)
T 3ow8_A          265 SSSSDKSVKVWDVGTR  280 (321)
T ss_dssp             EEETTSCEEEEETTTT
T ss_pred             EEeCCCcEEEEeCCCC
Confidence            9999999999999854

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.5e-33  Score=260.86  Aligned_cols=277  Identities=20%  Similarity=0.390  Sum_probs=227.6

Q ss_pred             ccccccc--cccCCccCcceEEEeecCceeeecccccccceeeec--CcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         101 PMLQRDF--ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       101 ~~~~~~~--~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      |.+..++  .++.+|+++ +||+| .|++|+|||+.+|+.++.+.  +|...|.+++|+                     
T Consensus        20 p~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~---------------------   76 (318)
T 4ggc_A           20 PEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWI---------------------   76 (318)
T ss_dssp             TTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEEC---------------------
T ss_pred             CCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEEC---------------------
Confidence            4444554  457788876 66665 59999999999999888765  667778888774                     


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                                                                                       ++++++++|+.||.|
T Consensus        77 -----------------------------------------------------------------~~~~~l~sgs~Dg~v   91 (318)
T 4ggc_A           77 -----------------------------------------------------------------KEGNYLAVGTSSAEV   91 (318)
T ss_dssp             -----------------------------------------------------------------TTSSEEEEEETTSEE
T ss_pred             -----------------------------------------------------------------CCCCEEEEEECCCcE
Confidence                                                                             467789999999999


Q ss_pred             EEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcC--CeEEEEeCC
Q psy9182         257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN--GMMVTCSKD  333 (486)
Q Consensus       257 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~--~~l~~~~~d  333 (486)
                      ++||+.+++.+..+.+|...+.++++++..+++++.++.+++|+...+ ..+..+..|...+..+.+.+  ..+++++.|
T Consensus        92 ~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d  171 (318)
T 4ggc_A           92 QLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND  171 (318)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC
Confidence            999999999999999999999999999999999999999999998876 45667788999999999875  489999999


Q ss_pred             CcEEEEECCCCCce-eeEEeeecCcccEEEEEe---CCCEE--EEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--
Q psy9182         334 RSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF---DEKYI--VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--  405 (486)
Q Consensus       334 g~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~---~~~~l--~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--  405 (486)
                      +.|++||+++++.. ........+...|.++.+   ++..+  ++++.++.|++||........... +...+..+.+  
T Consensus       172 ~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~  250 (318)
T 4ggc_A          172 NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSP  250 (318)
T ss_dssp             SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEET
T ss_pred             cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecc
Confidence            99999999886543 223445567778888887   34444  456678999999999887766554 4555666655  


Q ss_pred             CCCEEEEEe--CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         406 RDRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       406 ~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .+..+++++  .|+.|++||+++++++..+.+|.+.|++++|  ++++|+|||.||+|+|||+..
T Consensus       251 ~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~  315 (318)
T 4ggc_A          251 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE  315 (318)
T ss_dssp             TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred             cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence            466666554  7999999999999999999999999999999  889999999999999999964

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.1e-33  Score=276.39  Aligned_cols=290  Identities=29%  Similarity=0.517  Sum_probs=238.9

Q ss_pred             eeeecccccc-cceeeecCcccce-eEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCC
Q psy9182         127 TIKVWNTSSC-EFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGG  204 (486)
Q Consensus       127 ~v~iWd~~~~-~~~~~l~~h~~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~  204 (486)
                      .++.|..... .....+.+|...| .++.++                 +.++++++.||+|++||+.+....        
T Consensus       101 ~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~-----------------~~~l~sgs~dg~i~vwd~~~~~~~--------  155 (464)
T 3v7d_B          101 ILKNWYNPKFVPQRTTLRGHMTSVITCLQFE-----------------DNYVITGADDKMIRVYDSINKKFL--------  155 (464)
T ss_dssp             HHHHHHCTTCCCEEEEEECCSSSCEEEEEEE-----------------TTEEEEEETTSCEEEEETTTTEEE--------
T ss_pred             hHhhhcCCCcCcceEEEcCCCCCcEEEEEEC-----------------CCEEEEEcCCCcEEEEECCCCcEE--------
Confidence            3345543332 3466889998875 667664                 446888889999999997553321        


Q ss_pred             CCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-
Q psy9182         205 GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-  282 (486)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-  282 (486)
                                          ..   ...|...+.++.+. +..+++|+.||.|++||+.+++.+..+.+|...|.++++ 
T Consensus       156 --------------------~~---~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~  212 (464)
T 3v7d_B          156 --------------------LQ---LSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV  212 (464)
T ss_dssp             --------------------EE---ECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred             --------------------EE---EeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEe
Confidence                                11   22466667666653 339999999999999999999999999999999999987 


Q ss_pred             ---cCCEEEEEeCCCcEEEEECCCCc-----------------------EEEEecccCccEEEEEEcCCeEEEEeCCCcE
Q psy9182         283 ---DERVIISGSSDSTVRVWDVNTGE-----------------------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI  336 (486)
Q Consensus       283 ---~~~~l~~~~~dg~i~vwd~~~~~-----------------------~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i  336 (486)
                         +++++++|+.||.|++||++++.                       .+..+.+|...+.++...++.+++++.||.|
T Consensus       213 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i  292 (464)
T 3v7d_B          213 EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL  292 (464)
T ss_dssp             ESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCE
T ss_pred             cCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeE
Confidence               45899999999999999998765                       2556778889999999999999999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEe
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS  414 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  414 (486)
                      ++||+++++..   ..+.+|...|.++.+  +++++++++.||.|++||+++++++..+.+|...|.++.+++.+|++++
T Consensus       293 ~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s  369 (464)
T 3v7d_B          293 IVWDVAQMKCL---YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAA  369 (464)
T ss_dssp             EEEETTTTEEE---EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEE
T ss_pred             EEEECCCCcEE---EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEe
Confidence            99999887544   556789999999998  7889999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         415 SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       415 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      .||.|++||+.+++...... |...+..++|  ++++|++++ ||.|++||+.++..
T Consensus       370 ~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~  424 (464)
T 3v7d_B          370 ADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKL  424 (464)
T ss_dssp             TTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCE
T ss_pred             CCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcE
Confidence            99999999999887766653 4444555555  899999988 99999999998754

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=2e-34  Score=277.74  Aligned_cols=270  Identities=17%  Similarity=0.258  Sum_probs=226.1

Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG  250 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  250 (486)
                      +++.+|++++.|+.+++||+.+........                              ......+.++++++++|++|
T Consensus        66 ~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~l~~~  115 (420)
T 3vl1_A           66 KVGSHLYKARLDGHDFLFNTIIRDGSKMLK------------------------------RADYTAVDTAKLQMRRFILG  115 (420)
T ss_dssp             EEETTEEEEEETTEEEEEECCSEETTTTSC------------------------------SCCEEEEEEECSSSCEEEEE
T ss_pred             ecCCeEEEEEcCCcEEEEEecccceeeEEe------------------------------cCCceEEEEEecCCCEEEEE
Confidence            688889999999999999986654332111                              01223344567899999999


Q ss_pred             ecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--e
Q psy9182         251 LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--M  326 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~  326 (486)
                      +.||.|++||+.+++....+.+|...|.+++|  ++++|++|+.||.|++||+++++.+..+..|...|.+++|+++  .
T Consensus       116 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~  195 (420)
T 3vl1_A          116 TTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN  195 (420)
T ss_dssp             ETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred             ECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence            99999999999999999888999999999999  7889999999999999999999999999999999999999864  8


Q ss_pred             EEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----------------------CCCEEEEEeCCCcEEEEE
Q psy9182         327 MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----------------------DEKYIVSASGDRTIKVWN  383 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----------------------~~~~l~~~~~d~~i~iwd  383 (486)
                      +++++.|+.|++||+++++..........+...+.++.+                       +++++++++.||.|++||
T Consensus       196 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d  275 (420)
T 3vl1_A          196 VLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN  275 (420)
T ss_dssp             EEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred             EEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence            999999999999999988765443333345555555554                       677999999999999999


Q ss_pred             CCCceEEEEEc-CCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCCee-eEEecC-cccCeEEEEe-cCCEEEEEeCC
Q psy9182         384 TSSCEFVRTLN-GHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGAC-LRVLEG-HEELVRCIRF-DAKRIVSGAYD  456 (486)
Q Consensus       384 ~~~~~~~~~~~-~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~-h~~~v~~~~~-~~~~l~s~~~d  456 (486)
                      +++++.+..+. .|...+.++.++  +. +|++|+.||.|++||+++++. +..+.. |...|.++.+ ++++|++++.|
T Consensus       276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d  355 (420)
T 3vl1_A          276 VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFD  355 (420)
T ss_dssp             TTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTT
T ss_pred             CCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCC
Confidence            99998877775 578899999996  45 999999999999999998754 677766 6778999988 88899999999


Q ss_pred             CcEEEEeCCCCCCC
Q psy9182         457 GKIKVWNLVAALDP  470 (486)
Q Consensus       457 g~v~iwdl~~~~~~  470 (486)
                      |.|++||+.....+
T Consensus       356 ~~v~iw~~~~~~~~  369 (420)
T 3vl1_A          356 TSIKLDIISDPESE  369 (420)
T ss_dssp             EEEEEEEECCTTCC
T ss_pred             ccEEEEeccCCCCC
Confidence            99999999875444

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.6e-35  Score=281.18  Aligned_cols=274  Identities=16%  Similarity=0.234  Sum_probs=210.1

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccc--cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC--EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~--~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      +...|.++.++|++++|++|+.||.|+|||+.++  +.+..+.+|...|.+++|+               +++.+     
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s---------------~~~~~-----   69 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWA---------------PKSNR-----   69 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEEC---------------TTTCC-----
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEe---------------CCCCE-----
Confidence            4567999999999999999999999999999988  7888999999999999986               23334     


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                                                                                        |++++.||.|++||
T Consensus        70 ------------------------------------------------------------------l~s~s~d~~v~vwd   83 (377)
T 3dwl_C           70 ------------------------------------------------------------------IVTCSQDRNAYVYE   83 (377)
T ss_dssp             ------------------------------------------------------------------EEEEETTSSEEEC-
T ss_pred             ------------------------------------------------------------------EEEEeCCCeEEEEE
Confidence                                                                              45555555555555


Q ss_pred             CCCce---eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc---EEEEecc-cCccEEEEEEcCC--eEEE
Q psy9182         261 RVSLQ---CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE---MVNTLIH-HCEAVLHLRFSNG--MMVT  329 (486)
Q Consensus       261 ~~~~~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~-~~~~i~~~~~~~~--~l~~  329 (486)
                      +.+++   ....+.+|...|.+++|  ++++|++++.||.|++||+++++   ....+.. |...|.+++|+++  ++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~  163 (377)
T 3dwl_C           84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA  163 (377)
T ss_dssp             -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred             cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence            55444   45566779999999999  68899999999999999999887   3667777 8999999999865  8999


Q ss_pred             EeCCCcEEEEECCCCC---------------ceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE---
Q psy9182         330 CSKDRSIAVWDMVSPN---------------EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF---  389 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~---------------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~---  389 (486)
                      ++.|+.|++||+....               .......+ +|...|.++.|  ++++|++++.|+.|++||+.+++.   
T Consensus       164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~  242 (377)
T 3dwl_C          164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR  242 (377)
T ss_dssp             EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred             EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence            9999999999986332               11223334 88999999999  788999999999999999999887   


Q ss_pred             -EEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCe--e-------------------------e---------
Q psy9182         390 -VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA--C-------------------------L---------  430 (486)
Q Consensus       390 -~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~--~-------------------------~---------  430 (486)
                       +..+.+|...|.++.|  ++++|++|+.++.+ +|+...+.  .                         .         
T Consensus       243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (377)
T 3dwl_C          243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALR  321 (377)
T ss_dssp             ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------
T ss_pred             eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccc
Confidence             7888999999999988  57888888766655 66654211  0                         0         


Q ss_pred             EEe----------------cCcccCeEEEEe---cCC---EEEEEeCCCcEEEEeC
Q psy9182         431 RVL----------------EGHEELVRCIRF---DAK---RIVSGAYDGKIKVWNL  464 (486)
Q Consensus       431 ~~~----------------~~h~~~v~~~~~---~~~---~l~s~~~dg~v~iwdl  464 (486)
                      ..+                ..|...|+++++   ++.   .|+|+|.||.|++||+
T Consensus       322 ~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          322 STFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             ---------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            111                139999999997   333   6999999999999996

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=2.9e-34  Score=273.19  Aligned_cols=276  Identities=17%  Similarity=0.263  Sum_probs=219.1

Q ss_pred             ccccccccccCCccCc-ceEEEeecCceeeecccccccceeeec--CcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         101 PMLQRDFISLLPNFDE-KYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~-~~l~tg~~dg~v~iWd~~~~~~~~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      ..|...|.++.++|++ ++|++|+.||.|+|||+.+++....+.  +|...|.+++|++.                    
T Consensus        70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~--------------------  129 (383)
T 3ei3_B           70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF--------------------  129 (383)
T ss_dssp             CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--------------------
T ss_pred             cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--------------------
Confidence            4567889999999999 999999999999999999988877765  69999999988630                    


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                                                                                       ++.++++++.||.|+
T Consensus       130 -----------------------------------------------------------------~~~~l~s~~~d~~i~  144 (383)
T 3ei3_B          130 -----------------------------------------------------------------NTNQLFVSSIRGATT  144 (383)
T ss_dssp             -----------------------------------------------------------------EEEEEEEEETTTEEE
T ss_pred             -----------------------------------------------------------------CCCEEEEEeCCCEEE
Confidence                                                                             234466666666666


Q ss_pred             EEECCCceeeEEEcC---CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEE
Q psy9182         258 VWDRVSLQCIKVLTG---HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVT  329 (486)
Q Consensus       258 i~d~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~  329 (486)
                      +||+.+ ..+..+..   |...|.+++|  +++++++|+.||.|++||+ +++.+..+..|...|.+++|+++   .+++
T Consensus       145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  222 (383)
T 3ei3_B          145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMAT  222 (383)
T ss_dssp             EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred             EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence            666664 33334433   4477888888  7899999999999999999 57888899999999999999865   7999


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-------c-
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-------R-  398 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-------~-  398 (486)
                      ++.|+.|++||+++.+.........+|...|.++.|   ++++|++++.|+.|++||+++++....+..|.       . 
T Consensus       223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  302 (383)
T 3ei3_B          223 SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTP  302 (383)
T ss_dssp             EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCC
T ss_pred             EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccc
Confidence            999999999999974321111222268899999998   56899999999999999999988777776543       1 


Q ss_pred             ---------cEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecC--cccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         399 ---------GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG--HEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       399 ---------~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                               .+..+.+  ++++  +|+.||.|++||+.+++.+..+.+  |...+..++|  ++++|++++ ||.|++||
T Consensus       303 ~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~  379 (383)
T 3ei3_B          303 IKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWN  379 (383)
T ss_dssp             CCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred             eEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEe
Confidence                     2222333  3444  677899999999999999999987  4567778899  889999997 99999999


Q ss_pred             CCC
Q psy9182         464 LVA  466 (486)
Q Consensus       464 l~~  466 (486)
                      +++
T Consensus       380 ~~~  382 (383)
T 3ei3_B          380 RED  382 (383)
T ss_dssp             CC-
T ss_pred             cCC
Confidence            974

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=3.5e-33  Score=260.94  Aligned_cols=224  Identities=21%  Similarity=0.396  Sum_probs=199.3

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC----cEEEEecccCc
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG----EMVNTLIHHCE  315 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~  315 (486)
                      +++++|++|+.||.|++||..+++.+..+..|...|.+++|  +++++++|+.|+.|++||+.++    .....+.+|..
T Consensus        65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~  144 (340)
T 1got_B           65 TDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG  144 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred             CCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc
Confidence            36677889999999999999999989999999999999998  7899999999999999999875    35667788999


Q ss_pred             cEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         316 AVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       316 ~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      .+.++.|.+ +.+++++.|+.|++||+.+++..   ..+.+|...|.++.+  +++++++|+.|+.|++||+++++.+..
T Consensus       145 ~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~  221 (340)
T 1got_B          145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT---TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT  221 (340)
T ss_dssp             CEEEEEEEETTEEEEEETTSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE
T ss_pred             cEEEEEECCCCcEEEEECCCcEEEEECCCCcEE---EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE
Confidence            999999974 58999999999999999887644   566789999999999  788999999999999999999999999


Q ss_pred             EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC--cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         393 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG--HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       393 ~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      +.+|...|.++.++  +++|++|+.||.|++||+++++.+..+..  +...|++++|  ++++|++|+.||.|++||+.+
T Consensus       222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~  301 (340)
T 1got_B          222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK  301 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence            99999999999985  78999999999999999999988877753  3357999999  889999999999999999876


Q ss_pred             CC
Q psy9182         467 AL  468 (486)
Q Consensus       467 ~~  468 (486)
                      ..
T Consensus       302 ~~  303 (340)
T 1got_B          302 AD  303 (340)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=5.1e-34  Score=266.08  Aligned_cols=235  Identities=17%  Similarity=0.237  Sum_probs=198.4

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeee----cCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL----NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l----~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      +...|.+++|++++ +|++|+.||+|+|||+.+++.+..+    .+|...|.+++|+                       
T Consensus        81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~s-----------------------  136 (344)
T 4gqb_B           81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVL-----------------------  136 (344)
T ss_dssp             ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEEC-----------------------
T ss_pred             cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEEC-----------------------
Confidence            44568899999986 7889999999999999998865543    4788888888774                       


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                     +++++|++|+.||.|++
T Consensus       137 ---------------------------------------------------------------pdg~~l~sgs~d~~i~i  153 (344)
T 4gqb_B          137 ---------------------------------------------------------------SSGTQAVSGSKDICIKV  153 (344)
T ss_dssp             ---------------------------------------------------------------TTSSEEEEEETTSCEEE
T ss_pred             ---------------------------------------------------------------CCCCEEEEEeCCCeEEE
Confidence                                                                           46778999999999999


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEec--ccCccEEEEEEcCC---eEEEE
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNG---MMVTC  330 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~~~~---~l~~~  330 (486)
                      ||+.+++++..+.+|...|.++.|  ++ .++++++.||+|++||+++++....+.  .+...+.+++|+++   ++++|
T Consensus       154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg  233 (344)
T 4gqb_B          154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG  233 (344)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred             EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence            999999999999999999999999  44 588999999999999999999888774  34567899999753   78899


Q ss_pred             eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-
Q psy9182         331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-  406 (486)
Q Consensus       331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-  406 (486)
                      +.||.|++||+++++.+   ..+.+|...|.++.|  ++ ++|++|+.|++|++||+++++++ .+.+|...|.+++|+ 
T Consensus       234 ~~dg~v~~wd~~~~~~~---~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp  309 (344)
T 4gqb_B          234 DENGTVSLVDTKSTSCV---LSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSP  309 (344)
T ss_dssp             ETTSEEEEEESCC--CC---EEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECS
T ss_pred             ccCCcEEEEECCCCcEE---EEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeC
Confidence            99999999999988755   556789999999999  45 58999999999999999998754 578999999999995 


Q ss_pred             -C-CEEEEEeCCCcEEEEECCCCe
Q psy9182         407 -D-RLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       407 -~-~~l~~~~~dg~v~iwd~~~~~  428 (486)
                       + .+|++++.||+|++|++.+..
T Consensus       310 ~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          310 LNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             SSTTEEEEEETTSCEEEEECCC--
T ss_pred             CCCeEEEEEcCCCeEEEEECCCCC
Confidence             4 578899999999999998653

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.9e-34  Score=273.02  Aligned_cols=303  Identities=16%  Similarity=0.306  Sum_probs=239.3

Q ss_pred             CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcc-eeecCCCCCcceeeec----ccccccccC
Q psy9182         125 DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF-QIVSSSHDDTILIWDF----LNYSETPIQ  199 (486)
Q Consensus       125 dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~-~l~s~s~dg~i~vWd~----~~~~~~~~~  199 (486)
                      ...+.+|++...........|...|.+++|+               +++. +|++++.||.|++||+    .++...   
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---------------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---   85 (425)
T 1r5m_A           24 NSIDSSDDLDGFVKILKEIVKLDNIVSSTWN---------------PLDESILAYGEKNSVARLARIVETDQEGKKY---   85 (425)
T ss_dssp             ----------CCCEECEEEEECSCCSEEEEC---------------SSCTTEEEEEETBTEEEEEEEEEC------C---
T ss_pred             ccccccccchhhhhheeeeeccCceEEEEEC---------------CCCCcEEEEecCCceEEEEEEecccCCcccc---
Confidence            3456788887655555555677999999998               5777 8999999999999998    543310   


Q ss_pred             CCCCCCCCCCCcccccccccCceeEEEEec-c------CCC--ccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEE
Q psy9182         200 GGGGGGPPPSGPSIENNWRMGKFLLQRINC-R------SEN--SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL  270 (486)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~--~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  270 (486)
                                       |...  ....+.. .      ..+  ....+++++++++|++|+.||.|++|| .+++.+..+
T Consensus        86 -----------------~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~  145 (425)
T 1r5m_A           86 -----------------WKLT--IIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVL  145 (425)
T ss_dssp             -----------------EEEE--EEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEE
T ss_pred             -----------------cccc--ccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeec
Confidence                             0000  0000000 0      012  334455667899999999999999999 778888999


Q ss_pred             cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc---------------EEEEEEcC-CeEEEEeC
Q psy9182         271 TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA---------------VLHLRFSN-GMMVTCSK  332 (486)
Q Consensus       271 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------i~~~~~~~-~~l~~~~~  332 (486)
                      ..|...|.++.|  ++++|++++.||.|++||+.+++.+..+..+...               +.++.|++ +.+++++.
T Consensus       146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (425)
T 1r5m_A          146 NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP  225 (425)
T ss_dssp             CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG
T ss_pred             cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC
Confidence            999999999999  7889999999999999999999999888777666               78888874 58999999


Q ss_pred             CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCC-CE
Q psy9182         333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRD-RL  409 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~  409 (486)
                      +|.|++||+.+++..   ..+..|...+.++.+  +++++++++.|+.|++||+++++.+..+..|...+.++.+++ .+
T Consensus       226 ~g~i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  302 (425)
T 1r5m_A          226 KGAIFVYQITEKTPT---GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDK  302 (425)
T ss_dssp             GGCEEEEETTCSSCS---EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTE
T ss_pred             CCeEEEEEcCCCcee---eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCE
Confidence            999999999987654   445678899999998  788999999999999999999999999999999999999952 29


Q ss_pred             EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         410 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       410 l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +++++.||.|++||+++++.+..+..|...|.+++|  ++++|++++.||.|++||+.+..
T Consensus       303 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~  363 (425)
T 1r5m_A          303 VISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN  363 (425)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred             EEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence            999999999999999999999999999999999999  78999999999999999998654

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=277.35  Aligned_cols=321  Identities=19%  Similarity=0.267  Sum_probs=223.7

Q ss_pred             cccccccccccCCcc-CcceEEEeecCceeeecccccccceeeec-------------CcccceeEEEeecceeEecCCC
Q psy9182         100 KPMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSCEFVRTLN-------------GHKRGIACLQYRDRLVVSGSSD  165 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-------------~h~~~V~~~~~~~~~~~~~~~d  165 (486)
                      ...|...|.++.++| ++++|++|+.||.|++||+.+++....+.             +|...|.+++|++         
T Consensus        39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------  109 (408)
T 4a11_B           39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYP---------  109 (408)
T ss_dssp             CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECT---------
T ss_pred             eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEcc---------
Confidence            345889999999999 99999999999999999999887666553             6999999999973         


Q ss_pred             CceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---
Q psy9182         166 NTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY---  242 (486)
Q Consensus       166 ~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---  242 (486)
                           .++..+++++.||.|++||+.+.....                            .+.  ........++.+   
T Consensus       110 -----~~~~~l~s~~~d~~i~iwd~~~~~~~~----------------------------~~~--~~~~~~~~~~~~~~~  154 (408)
T 4a11_B          110 -----HDTGMFTSSSFDKTLKVWDTNTLQTAD----------------------------VFN--FEETVYSHHMSPVST  154 (408)
T ss_dssp             -----TCTTCEEEEETTSEEEEEETTTTEEEE----------------------------EEE--CSSCEEEEEECSSCS
T ss_pred             -----CCCcEEEEEeCCCeEEEeeCCCCccce----------------------------ecc--CCCceeeeEeecCCC
Confidence                 156689999999999999986533211                            111  112223333444   


Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEECCCCc-EEEEe--------
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDVNTGE-MVNTL--------  310 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~~~~~-~~~~~--------  310 (486)
                      ++.++++++.+|.|++||+.+++.+..+.+|...|.++++  +++ ++++++.||.|++||++++. .+..+        
T Consensus       155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~  234 (408)
T 4a11_B          155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS  234 (408)
T ss_dssp             SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred             CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence            4559999999999999999999999999999999999999  455 69999999999999998765 33443        


Q ss_pred             -------cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEee--ec-CcccEEEEEe-CCCEEEEEeCCC
Q psy9182         311 -------IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVL--VG-HRAAVNVVDF-DEKYIVSASGDR  377 (486)
Q Consensus       311 -------~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~-~~~~v~~~~~-~~~~l~~~~~d~  377 (486)
                             ..|...|.+++|+++  .+++++.||.|++||+.+++........  .. .......... .+..+++++.++
T Consensus       235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (408)
T 4a11_B          235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS  314 (408)
T ss_dssp             CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred             eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence                   467889999999865  8999999999999999987654221110  00 1111112222 456677778899


Q ss_pred             cEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEe
Q psy9182         378 TIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGA  454 (486)
Q Consensus       378 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~  454 (486)
                      .|++||+.+++.+..+.+|...|.++.++  +++|++|+.||.|++||+++++.+.....+... ..+.. ....+.+.+
T Consensus       315 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  393 (408)
T 4a11_B          315 TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK-SQLNPAFEDAWSSSD  393 (408)
T ss_dssp             EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------
T ss_pred             EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec-cccccccceeecccC
Confidence            99999999999999999999999999884  789999999999999999999887766544322 22233 445567788


Q ss_pred             CCCcEEEEeCC
Q psy9182         455 YDGKIKVWNLV  465 (486)
Q Consensus       455 ~dg~v~iwdl~  465 (486)
                      .|+.+++|+..
T Consensus       394 ~~~~~~~W~~~  404 (408)
T 4a11_B          394 EEGGTSAWSHP  404 (408)
T ss_dssp             -----------
T ss_pred             ccCceeecCCc
Confidence            89999999865

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=8.2e-34  Score=272.17  Aligned_cols=312  Identities=21%  Similarity=0.306  Sum_probs=245.6

Q ss_pred             ecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceecc-CcceeecCCCCCcceeeecccccccccCCC
Q psy9182         123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR-DEFQIVSSSHDDTILIWDFLNYSETPIQGG  201 (486)
Q Consensus       123 ~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~-~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~  201 (486)
                      ..++.+++|++.+++....+.+|.+.|.+++|+               + ++.+|++++.||.|++||+.+.........
T Consensus        20 ~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s---------------~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~   84 (408)
T 4a11_B           20 RAESTRRVLGLELNKDRDVERIHGGGINTLDIE---------------PVEGRYMLSGGSDGVIVLYDLENSSRQSYYTC   84 (408)
T ss_dssp             HHHHHHHHHTEEECTTEEECCCCSSCEEEEEEC---------------TTTCCEEEEEETTSCEEEEECCCCSSSSCEEE
T ss_pred             eccCcceeeccccCcceeeeeccCCcEEEEEEe---------------cCCCCEEEEEcCCCeEEEEECCCCcccceEec
Confidence            456789999999999999999999999999997               5 778899999999999999876443221100


Q ss_pred             CCCCCCCCCcccccccccCceeEEEE--eccCCCccceEEEE--e-CCCEEEEEecCCeEEEEECCCceeeEEEcCCccc
Q psy9182         202 GGGGPPPSGPSIENNWRMGKFLLQRI--NCRSENSKGVYCLQ--Y-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS  276 (486)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~--~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  276 (486)
                      .                    .....  .....+...+.++.  + ++.++++++.||.|++||+.+++....+. +...
T Consensus        85 ~--------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~  143 (408)
T 4a11_B           85 K--------------------AVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEET  143 (408)
T ss_dssp             C--------------------EEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSC
T ss_pred             c--------------------ccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCc
Confidence            0                    00000  00123445555554  4 56789999999999999999999988887 6677


Q ss_pred             EEEEEe-----cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCcee
Q psy9182         277 VLCLQY-----DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEIT  348 (486)
Q Consensus       277 v~~~~~-----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~  348 (486)
                      +.++.+     ++.++++++.||.|++||+++++.+..+..|...|.+++|+++   .+++++.||.|++||++......
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~  223 (408)
T 4a11_B          144 VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCL  223 (408)
T ss_dssp             EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCS
T ss_pred             eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccc
Confidence            888877     3459999999999999999999999999999999999999865   58899999999999998765221


Q ss_pred             eE-------------EeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-----c-EEEEEe-C
Q psy9182         349 LR-------------RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-----G-IACLQY-R  406 (486)
Q Consensus       349 ~~-------------~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~-v~~~~~-~  406 (486)
                      ..             .....|...|.++.|  +++++++++.|+.|++||+.+++....+..+..     . ...... .
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (408)
T 4a11_B          224 ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGC  303 (408)
T ss_dssp             EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSS
T ss_pred             ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCC
Confidence            11             112568889999999  788999999999999999999877655443221     1 112222 3


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      +..+++++.|+.|++||+.+++++..+.+|...|++++|  ++++|++++.||.|++||+.+....
T Consensus       304 ~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~  369 (408)
T 4a11_B          304 SSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV  369 (408)
T ss_dssp             SSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred             CceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence            566777888999999999999999999999999999999  8899999999999999999987543

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=9.6e-35  Score=281.10  Aligned_cols=280  Identities=19%  Similarity=0.222  Sum_probs=210.2

Q ss_pred             cccccccccCCcc-CcceEEEeecCceeeecccccccce--eeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         102 MLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       102 ~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~~~~--~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      .|...|+|++|+| ++.+||+|+.||.|+|||+.+++..  ..+.+|.+.|.+++|++              .++.+|+ 
T Consensus       117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p--------------~~~~~l~-  181 (435)
T 4e54_B          117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNP--------------LNTNQFY-  181 (435)
T ss_dssp             ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECS--------------SCTTEEE-
T ss_pred             CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeC--------------CCCCEEE-
Confidence            4566799999998 5679999999999999999877654  45568999999999963              1333444 


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                            +|+.||+|++
T Consensus       182 ----------------------------------------------------------------------s~s~D~~v~i  191 (435)
T 4e54_B          182 ----------------------------------------------------------------------ASSMEGTTRL  191 (435)
T ss_dssp             ----------------------------------------------------------------------EECSSSCEEE
T ss_pred             ----------------------------------------------------------------------EEeCCCEEEE
Confidence                                                                                  4444555555


Q ss_pred             EECCCceeeEEEcC--CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEe
Q psy9182         259 WDRVSLQCIKVLTG--HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCS  331 (486)
Q Consensus       259 ~d~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~  331 (486)
                      ||+.++........  +...+.++++  ++++|++|+.||.|++||++ ++.+..+..|...|.+++|+++   ++++|+
T Consensus       192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s  270 (435)
T 4e54_B          192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATAS  270 (435)
T ss_dssp             EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred             eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEec
Confidence            55444332222222  2334556666  78999999999999999986 4566778899999999999853   788999


Q ss_pred             CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc------EEEE
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG------IACL  403 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------v~~~  403 (486)
                      .|+.|++||+++.+.........+|...|.++.|  ++++|++++.|+.|++||+.+++....+..|...      +...
T Consensus       271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (435)
T 4e54_B          271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA  350 (435)
T ss_dssp             TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred             CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence            9999999999887655444455679999999998  7899999999999999999999888877665432      1112


Q ss_pred             Ee--CCCEEEEEe------------CCCcEEEEECCCCeeeEEec-CcccCeEEE-Ee--cCCEEEEEeCCCcEEEEeCC
Q psy9182         404 QY--RDRLVVSGS------------SDNTIRLWDIECGACLRVLE-GHEELVRCI-RF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       404 ~~--~~~~l~~~~------------~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~-~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      .+  ++.++++++            .++.|++||..+++.+..+. +|...|.++ +|  +|++|++|+ |+.|+|||++
T Consensus       351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~  429 (435)
T 4e54_B          351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ  429 (435)
T ss_dssp             EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred             EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence            22  345555543            34679999999999988874 678888887 57  788898876 8899999998


Q ss_pred             CCC
Q psy9182         466 AAL  468 (486)
Q Consensus       466 ~~~  468 (486)
                      .++
T Consensus       430 ~gk  432 (435)
T 4e54_B          430 EAR  432 (435)
T ss_dssp             ---
T ss_pred             cCe
Confidence            763

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.6e-33  Score=265.55  Aligned_cols=293  Identities=14%  Similarity=0.197  Sum_probs=224.0

Q ss_pred             ccccccCCccCcceEEEeecCc-------eeeecccccccc----------eeeecCcccceeEEEeecceeEecCCCCc
Q psy9182         105 RDFISLLPNFDEKYIVSASGDR-------TIKVWNTSSCEF----------VRTLNGHKRGIACLQYRDRLVVSGSSDNT  167 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg-------~v~iWd~~~~~~----------~~~l~~h~~~V~~~~~~~~~~~~~~~d~~  167 (486)
                      .+|.+++|+||+++|++|+.|.       .|++|++..+..          ...|.+|...|.+++++++.++++..++.
T Consensus        15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~   94 (365)
T 4h5i_A           15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENS   94 (365)
T ss_dssp             SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCH
T ss_pred             CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCc
Confidence            4689999999999999987543       599999875432          13467899999999999998888877644


Q ss_pred             eeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182         168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI  247 (486)
Q Consensus       168 i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  247 (486)
                            ..|++++.|+.+++|++.....                                                    
T Consensus        95 ------~~l~s~~~d~~~r~~~~~~~~~----------------------------------------------------  116 (365)
T 4h5i_A           95 ------TKITQGKGNKHLRKFKYDKVND----------------------------------------------------  116 (365)
T ss_dssp             ------HHHHHTSCCCCEEEEEEETTTT----------------------------------------------------
T ss_pred             ------cEEEEecCCCcEEEEEecCCCc----------------------------------------------------
Confidence                  4578888999999998743210                                                    


Q ss_pred             EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEE--eCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182         248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG--SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~  323 (486)
                             .+..+.....   .....+...+.+++|  ||++++++  +.|++|++||+++++++..+. |...|.+++|+
T Consensus       117 -------~~~~~~~~~~---~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fs  185 (365)
T 4h5i_A          117 -------QLEFLTSVDF---DASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFS  185 (365)
T ss_dssp             -------EEEEEEEECS---SCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEEC
T ss_pred             -------eEEEeeeece---eecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEc
Confidence                   0111100000   001123334555555  88887654  468999999999999988875 56789999998


Q ss_pred             CC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC----cEEEEECCCceE----EE
Q psy9182         324 NG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR----TIKVWNTSSCEF----VR  391 (486)
Q Consensus       324 ~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~----~i~iwd~~~~~~----~~  391 (486)
                      |+  ++++++ ++.+.+|+..+++... ......|...+.++.|  +++++++++.|+    .+++||+.....    ..
T Consensus       186 pdg~~l~s~s-~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~  263 (365)
T 4h5i_A          186 TDGKVVAYIT-GSSLEVISTVTGSCIA-RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK  263 (365)
T ss_dssp             TTSSEEEEEC-SSCEEEEETTTCCEEE-EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred             cCCceEEecc-ceeEEEEEeccCccee-eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee
Confidence            75  666665 6667788877766432 2345578888999888  889999998877    688899876543    45


Q ss_pred             EEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         392 TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       392 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .+.+|...|++++|  ++++||+|+.|++|+|||+++++++..+ .+|...|++|+|  ||++|++||.|++|+|||+..
T Consensus       264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            67789999999988  4899999999999999999999999875 789999999999  899999999999999999975


Q ss_pred             CC
Q psy9182         467 AL  468 (486)
Q Consensus       467 ~~  468 (486)
                      ..
T Consensus       344 ~~  345 (365)
T 4h5i_A          344 NY  345 (365)
T ss_dssp             TT
T ss_pred             CC
Confidence            54

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-35  Score=287.19  Aligned_cols=328  Identities=10%  Similarity=0.108  Sum_probs=224.3

Q ss_pred             cccccccCCccCc---------ceEEE-------------------eecCceeeecccccccce----eeecCcccceeE
Q psy9182         104 QRDFISLLPNFDE---------KYIVS-------------------ASGDRTIKVWNTSSCEFV----RTLNGHKRGIAC  151 (486)
Q Consensus       104 ~~~~~~~~~s~~~---------~~l~t-------------------g~~dg~v~iWd~~~~~~~----~~l~~h~~~V~~  151 (486)
                      ...|.++.++|++         ++||+                   ++.||+|+|||+.+++..    .++.+|.+.|.+
T Consensus       133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~  212 (524)
T 2j04_B          133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD  212 (524)
T ss_dssp             CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred             CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence            4567788888876         56666                   557899999999887753    456788889999


Q ss_pred             EEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccC
Q psy9182         152 LQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS  231 (486)
Q Consensus       152 ~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (486)
                      ++|++..    ..     -+++.+|++++.||+|++||+..........                ..... ....   ..
T Consensus       213 v~wsp~~----~~-----~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~----------------~~~~~-p~~~---l~  263 (524)
T 2j04_B          213 LKWHEGC----HA-----PHLVGCLSFVSQEGTINFLEIIDNATDVHVF----------------KMCEK-PSLT---LS  263 (524)
T ss_dssp             EEECSSC----CC-----SSSSCEEEEEETTSCEEEEECCCCSSSSSEE----------------ECCCS-CSEE---EC
T ss_pred             EEECCCC----CC-----CCCCceEEEEecCCeEEEEEcCCCccccccc----------------eeecC-ceEE---EE
Confidence            9998531    00     0235689999999999999986543110000                00000 0001   12


Q ss_pred             CCccceEEEEe-CCCEEEEEecCCeEEEEECCCc-eeeEEEcCCcccEEEE--Ee--cC-CEEEEEeCCCcEEEEECCCC
Q psy9182         232 ENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSL-QCIKVLTGHTGSVLCL--QY--DE-RVIISGSSDSTVRVWDVNTG  304 (486)
Q Consensus       232 ~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~--~~--~~-~~l~~~~~dg~i~vwd~~~~  304 (486)
                      .+...+.++.+ .+..|++|+.||+|++||+.++ .+...+.+|...|.++  .+  ++ .+|++|+.||+|++||++++
T Consensus       264 ~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~  343 (524)
T 2j04_B          264 LADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI  343 (524)
T ss_dssp             CTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH
T ss_pred             cCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC
Confidence            34556667665 3468999999999999999876 4456788999999999  44  45 79999999999999999988


Q ss_pred             cEEEEecccCc--cEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182         305 EMVNTLIHHCE--AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT  378 (486)
Q Consensus       305 ~~~~~~~~~~~--~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~  378 (486)
                      ++...+.+|..  .+.+++|+|+  .+++++.|+.|++||++++...   ..+.+|...|.+++|  ++++|++|+.|++
T Consensus       344 ~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~---~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt  420 (524)
T 2j04_B          344 ATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV---HPLVSRETTITAIGVSRLHPMVLAGSADGS  420 (524)
T ss_dssp             HHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC---EEEEECSSCEEEEECCSSCCBCEEEETTTE
T ss_pred             CcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc---eeeecCCCceEEEEeCCCCCeEEEEECCCE
Confidence            77666655543  4788999874  7889999999999999987654   345579999999999  7889999999999


Q ss_pred             EEEEECCCceEEEEEcC-----CcccEEEEEeC--CCEEEEEeCCCcEEEEECC-CCeeeEEecCcccCeEEEEe--c--
Q psy9182         379 IKVWNTSSCEFVRTLNG-----HKRGIACLQYR--DRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCIRF--D--  446 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~~~--~--  446 (486)
                      |++||+... .+..++.     +...+..++++  ++.+ ....  .+.+|+.. ++.++..+.+|...|.+|+|  +  
T Consensus       421 v~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~  496 (524)
T 2j04_B          421 LIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKY-RIDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA  496 (524)
T ss_dssp             EECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEE-EECC--CCCCCC-------------CCCSCCCEEECCSTT
T ss_pred             EEEEechHh-hccccccCccceeeeEEEEeccCCCCCeE-EccC--CceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence            999998653 2222111     11134566554  4533 2222  23344332 47788889999999999999  3  


Q ss_pred             -CCEEEEEeCCCcEEEEeCCCC
Q psy9182         447 -AKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       447 -~~~l~s~~~dg~v~iwdl~~~  467 (486)
                       +..+++|+.||.|+||+++..
T Consensus       497 ~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          497 GGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             TTTEEEEECTTSEEEEEECSCC
T ss_pred             ccHHHHhhccCceEEEEEcccc
Confidence             338999999999999999754

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=4.3e-34  Score=269.05  Aligned_cols=280  Identities=13%  Similarity=0.223  Sum_probs=228.5

Q ss_pred             ccccccccccCCccCcceE-EEeec---Cceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         101 PMLQRDFISLLPNFDEKYI-VSASG---DRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l-~tg~~---dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      ..|...|.++.++|++..+ ++|+.   ||.|+|||+.+++..... .+|...|.+++|++.                  
T Consensus        15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------   76 (357)
T 3i2n_A           15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGAT------------------   76 (357)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTC------------------
T ss_pred             cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCC------------------
Confidence            4578899999999999655 55665   999999999998866543 378888999888531                  


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                                                                                       .+++.++++|+.||.
T Consensus        77 -----------------------------------------------------------------~~~~~~l~~~~~dg~   91 (357)
T 3i2n_A           77 -----------------------------------------------------------------SLQQRYLATGDFGGN   91 (357)
T ss_dssp             -----------------------------------------------------------------CTTTCCEEEEETTSC
T ss_pred             -----------------------------------------------------------------CCCCceEEEecCCCe
Confidence                                                                             012566788888888


Q ss_pred             EEEEECCCce-eeEEEcCCcccEEEEEe--------cCCEEEEEeCCCcEEEEECCCCc-EEEEecccCc----cEEEEE
Q psy9182         256 IKVWDRVSLQ-CIKVLTGHTGSVLCLQY--------DERVIISGSSDSTVRVWDVNTGE-MVNTLIHHCE----AVLHLR  321 (486)
Q Consensus       256 i~i~d~~~~~-~~~~~~~~~~~v~~~~~--------~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~----~i~~~~  321 (486)
                      |++||+.+++ .+..+.+|...|.++.+        ++++|++++.||.|++||+++++ .+..+..+..    .+.++.
T Consensus        92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~  171 (357)
T 3i2n_A           92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA  171 (357)
T ss_dssp             EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred             EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence            8888888877 78888899999999853        57899999999999999999887 6777755444    788888


Q ss_pred             E----c--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         322 F----S--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       322 ~----~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      +    +  +..+++++.||.|++||+++++..    ....|...+.++.|     +++++++++.||.|++||+++++..
T Consensus       172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  247 (357)
T 3i2n_A          172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALR----WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT  247 (357)
T ss_dssp             EECCCC-CCCEEEEEETTSEEEEEETTTTEEE----EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred             EEeccCCCCCEEEEEccCCeEEEEECccCcee----eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence            4    3  458999999999999999987643    23567888999998     4689999999999999999887765


Q ss_pred             EEEc-----CCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCC-------------------eeeEEecCcccCeEEE
Q psy9182         391 RTLN-----GHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECG-------------------ACLRVLEGHEELVRCI  443 (486)
Q Consensus       391 ~~~~-----~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~-------------------~~~~~~~~h~~~v~~~  443 (486)
                      ..+.     +|...|.++.++  +. ++++++.||.|++||++++                   +.+..+.+|...|+++
T Consensus       248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~  327 (357)
T 3i2n_A          248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSL  327 (357)
T ss_dssp             TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEE
T ss_pred             cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEE
Confidence            5554     899999999995  44 8999999999999999754                   4677889999999999


Q ss_pred             Ee--cCCEEE-EEeCCCcEEEEeCCCC
Q psy9182         444 RF--DAKRIV-SGAYDGKIKVWNLVAA  467 (486)
Q Consensus       444 ~~--~~~~l~-s~~~dg~v~iwdl~~~  467 (486)
                      +|  ++++|+ +++.||.|++||+...
T Consensus       328 ~~s~~~~~l~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          328 DWSPDKRGLCVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             EECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred             EEcCCCCeEEEEecCCCcEEEEECCCc
Confidence            99  778888 8999999999999753

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.8e-33  Score=294.25  Aligned_cols=317  Identities=20%  Similarity=0.322  Sum_probs=259.6

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...+.+++++|++++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+               +++..|++++
T Consensus        10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s---------------~~~~~l~~~~   74 (814)
T 3mkq_A           10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFI---------------ARKNWIIVGS   74 (814)
T ss_dssp             EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE---------------GGGTEEEEEE
T ss_pred             ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEe---------------CCCCEEEEEe
Confidence            3567789999999999999999999999999999999999999999999999998               6788899999


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .||.|++||+.++..                            ...+.. +......++++++++++++++.||.|++||
T Consensus        75 ~dg~i~vw~~~~~~~----------------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~  125 (814)
T 3mkq_A           75 DDFRIRVFNYNTGEK----------------------------VVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWN  125 (814)
T ss_dssp             TTSEEEEEETTTCCE----------------------------EEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             CCCeEEEEECCCCcE----------------------------EEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence            999999999865332                            111211 122334456677899999999999999999


Q ss_pred             CCCc-eeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccC-ccEEEEEEcC----CeEEEEe
Q psy9182         261 RVSL-QCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFSN----GMMVTCS  331 (486)
Q Consensus       261 ~~~~-~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~~~----~~l~~~~  331 (486)
                      +.++ .....+.+|...|.+++|   +++.+++++.||.|++||+.+++....+..+. ..+.++.|++    ..+++++
T Consensus       126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~  205 (814)
T 3mkq_A          126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS  205 (814)
T ss_dssp             GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred             CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence            9887 777888999999999998   45799999999999999999888777765544 7888999965    3899999


Q ss_pred             CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--C
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--D  407 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~  407 (486)
                      .||.|++||+.+++..   ..+.+|...|.++.|  +++++++++.||.|++||+.+++.+..+..|...+.+++++  +
T Consensus       206 ~dg~i~~~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~  282 (814)
T 3mkq_A          206 DDLTIKIWDYQTKSCV---ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG  282 (814)
T ss_dssp             TTSEEEEEETTTTEEE---EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTC
T ss_pred             CCCEEEEEECCCCcEE---EEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCC
Confidence            9999999999887643   556678899999998  78899999999999999999999999999999999999985  3


Q ss_pred             C--EEEEEeCCCcEEEEECCCCeeeEE-------------------------------------------ecCcccCeEE
Q psy9182         408 R--LVVSGSSDNTIRLWDIECGACLRV-------------------------------------------LEGHEELVRC  442 (486)
Q Consensus       408 ~--~l~~~~~dg~v~iwd~~~~~~~~~-------------------------------------------~~~h~~~v~~  442 (486)
                      .  +++++ .++.+.+|++..+.....                                           +..+...+.+
T Consensus       283 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (814)
T 3mkq_A          283 RKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQS  361 (814)
T ss_dssp             GGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSE
T ss_pred             CceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCce
Confidence            3  35554 467788888764322211                                           1223445778


Q ss_pred             EEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         443 IRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       443 ~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ++|  +|++|++++ ||.+.+|++..
T Consensus       362 ~~~spdg~~la~~~-~~~~~i~~~~~  386 (814)
T 3mkq_A          362 LAHSPNGRFVTVVG-DGEYVIYTALA  386 (814)
T ss_dssp             EEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred             eEECCCCCEEEEec-CCEEEEEECcc
Confidence            888  788888887 88999999764

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=2.1e-32  Score=255.28  Aligned_cols=274  Identities=18%  Similarity=0.322  Sum_probs=228.8

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccce---eeec--CcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV---RTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~---~~l~--~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      .|...+.++.++|++++|++++ ||.|++||+.+++..   ..+.  +|...|.+++|+               +++.++
T Consensus        49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~~~l  112 (337)
T 1gxr_A           49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL---------------PDGCTL  112 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEEC---------------TTSSEE
T ss_pred             cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEc---------------CCCCEE
Confidence            4677899999999999999999 999999999887643   3333  799999999997               577889


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                      ++++.|+.|++||+.+....                          ....+. ........++++++++++++++.||.|
T Consensus       113 ~~~~~d~~i~~~d~~~~~~~--------------------------~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v  165 (337)
T 1gxr_A          113 IVGGEASTLSIWDLAAPTPR--------------------------IKAELT-SSAPACYALAISPDSKVCFSCCSDGNI  165 (337)
T ss_dssp             EEEESSSEEEEEECCCC--E--------------------------EEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EEEcCCCcEEEEECCCCCcc--------------------------eeeecc-cCCCceEEEEECCCCCEEEEEeCCCcE
Confidence            99999999999998543210                          111111 112223345566789999999999999


Q ss_pred             EEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182         257 KVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       257 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                      ++||+.+++.+..+..|...+.++.+  +++++++++.||.|++||+++++.+..+. +...+.+++|+++  .+++++.
T Consensus       166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~  244 (337)
T 1gxr_A          166 AVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME  244 (337)
T ss_dssp             EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET
T ss_pred             EEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC
Confidence            99999999999999999999999999  78899999999999999999998887764 5778999999864  8999999


Q ss_pred             CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CC
Q psy9182         333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR  408 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~  408 (486)
                      ++.|++||+.+++.    .....|...+.++.|  +++++++++.||.|++||+.+++.+... .|...+.++.++  ++
T Consensus       245 ~~~i~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~  319 (337)
T 1gxr_A          245 SSNVEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDK  319 (337)
T ss_dssp             TSCEEEEETTSSCE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSC
T ss_pred             CCcEEEEECCCCCe----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCC
Confidence            99999999988764    245678899999999  6899999999999999999999887544 478889998884  78


Q ss_pred             EEEEEeCCCcEEEEEC
Q psy9182         409 LVVSGSSDNTIRLWDI  424 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~  424 (486)
                      +|++++.||.|++|++
T Consensus       320 ~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          320 YIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEEEETTSCEEEEEE
T ss_pred             EEEEecCCCeEEEEEE
Confidence            9999999999999996

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.6e-32  Score=255.55  Aligned_cols=247  Identities=25%  Similarity=0.391  Sum_probs=208.2

Q ss_pred             EEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeE---EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEE
Q psy9182         226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK---VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD  300 (486)
Q Consensus       226 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd  300 (486)
                      .+..+.......++++|++++|++|+.|+.|++||+.++....   ...+|...|.+++|  ++++|++|+.|+.+++||
T Consensus        10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~   89 (345)
T 3fm0_A           10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK   89 (345)
T ss_dssp             EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence            3333333345567788899999999999999999998876432   23689999999999  789999999999999999


Q ss_pred             CCCC--cEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe
Q psy9182         301 VNTG--EMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       301 ~~~~--~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      +.++  +.+..+.+|...|.+++|+++  +|++|+.|+.|++||++.+........+.+|...|.++.|  ++++|++++
T Consensus        90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s  169 (345)
T 3fm0_A           90 KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS  169 (345)
T ss_dssp             ECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred             ccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence            9876  457788999999999999864  9999999999999999887766666778889999999998  788999999


Q ss_pred             CCCcEEEEECCCce--EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC---------------CeeeEEecC
Q psy9182         375 GDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC---------------GACLRVLEG  435 (486)
Q Consensus       375 ~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~---------------~~~~~~~~~  435 (486)
                      .|+.|++||.++++  +...+.+|...|.+++|+  +++|++|+.|++|++||...               .+++..+.+
T Consensus       170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (345)
T 3fm0_A          170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG  249 (345)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECS
T ss_pred             CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecC
Confidence            99999999998875  457889999999999995  78999999999999999632               134455555


Q ss_pred             -cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCCCC
Q psy9182         436 -HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDPRA  472 (486)
Q Consensus       436 -h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~~~  472 (486)
                       |...|.+++|  ++..|++++.|+.|++|++.....+..
T Consensus       250 ~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~  289 (345)
T 3fm0_A          250 FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQ  289 (345)
T ss_dssp             SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTS
T ss_pred             CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcce
Confidence             8889999999  788999999999999999987654433

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.4e-32  Score=251.31  Aligned_cols=227  Identities=30%  Similarity=0.574  Sum_probs=200.3

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA  316 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  316 (486)
                      +++++++++++|+.||.|++|+..+++....+.+|...|.+++|  ++++|++++.||.|++||+++++.+..+..|...
T Consensus        30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~  109 (312)
T 4ery_A           30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY  109 (312)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred             EECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC
Confidence            34567889999999999999999999999999999999999999  7899999999999999999999999999999999


Q ss_pred             EEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         317 VLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       317 i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      |.++.|+++  .+++|+.|+.|++||+++++..   ..+..|...+.++.+  +++++++++.|+.|++||+++++.+..
T Consensus       110 v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~  186 (312)
T 4ery_A          110 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL---KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT  186 (312)
T ss_dssp             EEEEEECSSSSEEEEEETTSCEEEEETTTCCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE---EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence            999999864  8999999999999999987654   556678899999998  788999999999999999999988877


Q ss_pred             Ec-CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE--Ee---cCCEEEEEeCCCcEEEEeC
Q psy9182         393 LN-GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RF---DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       393 ~~-~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~--~~---~~~~l~s~~~dg~v~iwdl  464 (486)
                      +. .+...+.++.++  +++|++++.||.|++||+++++.+..+.+|...+..+  .+   ++.+|++|+.||.|++||+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~  266 (312)
T 4ery_A          187 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL  266 (312)
T ss_dssp             ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred             EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence            65 455678888874  8899999999999999999999999999887654322  22   6889999999999999999


Q ss_pred             CCCC
Q psy9182         465 VAAL  468 (486)
Q Consensus       465 ~~~~  468 (486)
                      .++.
T Consensus       267 ~~~~  270 (312)
T 4ery_A          267 QTKE  270 (312)
T ss_dssp             TTCC
T ss_pred             CCch
Confidence            8654

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=5.9e-33  Score=259.76  Aligned_cols=275  Identities=12%  Similarity=0.101  Sum_probs=232.2

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc---ceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~---~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      ..|...|.++.++|++++|++|+.||.|+|||+.+++   ....+.+|...|.+++|+                      
T Consensus         8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~----------------------   65 (342)
T 1yfq_A            8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI----------------------   65 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEE----------------------
T ss_pred             cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEEC----------------------
Confidence            4677889999999999999999999999999998876   344555777777777663                      


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCC-EEEEEecCCeE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH-KIVSGLRDNTI  256 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i  256 (486)
                                                                                      ++++ ++++|+.||.|
T Consensus        66 ----------------------------------------------------------------~~~~~~l~~~~~dg~i   81 (342)
T 1yfq_A           66 ----------------------------------------------------------------DNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             ----------------------------------------------------------------ESSSEEEEEEETTSCE
T ss_pred             ----------------------------------------------------------------CCCCcEEEEEcCCCeE
Confidence                                                                            4566 77788888888


Q ss_pred             EEEEC-CCceeeEEEcC--CcccEEEEEec-CCEEEEEeCCCcEEEEECCC---------CcEEEEecccCccEEEEEEc
Q psy9182         257 KVWDR-VSLQCIKVLTG--HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT---------GEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       257 ~i~d~-~~~~~~~~~~~--~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~i~~~~~~  323 (486)
                      ++||+ .+++. ..+.+  |...|.++.|. ++.+++++.||.|++||+++         ++++..+. +...+.+++++
T Consensus        82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~  159 (342)
T 1yfq_A           82 LKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN  159 (342)
T ss_dssp             EEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred             EEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence            88887 66644 66777  99999999985 79999999999999999987         66665555 78899999999


Q ss_pred             CCeEEEEeCCCcEEEEECCC-CCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCc------eEEEEE
Q psy9182         324 NGMMVTCSKDRSIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSC------EFVRTL  393 (486)
Q Consensus       324 ~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~------~~~~~~  393 (486)
                      ++.+++++.|+.|++||+++ .... .......+...+.++.+   +++++++++.||.|++||++..      +....+
T Consensus       160 ~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  238 (342)
T 1yfq_A          160 SSRLIVGMNNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             SSEEEEEESTTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             CCcEEEEeCCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence            99999999999999999988 5432 22344567788998888   4689999999999999999887      778888


Q ss_pred             cCCcc---------cEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc-ccCeEEEEecCCEEEEEeCCCc-EE
Q psy9182         394 NGHKR---------GIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-EELVRCIRFDAKRIVSGAYDGK-IK  460 (486)
Q Consensus       394 ~~~~~---------~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~l~s~~~dg~-v~  460 (486)
                      ..|..         .|.++.++  +++|++++.||.|++||+.+++.+..+.+| ...|.+++.++++|++++.||. .+
T Consensus       239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~Dg~~~~  318 (342)
T 1yfq_A          239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKT  318 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHH
T ss_pred             ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEecCCCCeEEEEecCCcccc
Confidence            88865         89999984  789999999999999999999999999998 9999999999999999999998 65


Q ss_pred             EEeC
Q psy9182         461 VWNL  464 (486)
Q Consensus       461 iwdl  464 (486)
                      .|..
T Consensus       319 ~~~~  322 (342)
T 1yfq_A          319 NAAI  322 (342)
T ss_dssp             CSSS
T ss_pred             cccc
Confidence            5554

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=4.6e-32  Score=254.60  Aligned_cols=223  Identities=24%  Similarity=0.401  Sum_probs=195.0

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC------cEEEEecccC
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG------EMVNTLIHHC  314 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~  314 (486)
                      ++++|++|+.||+|++||..+++....+..|...|.+++|  ++..+++|+.|+.+++|++...      .....+..|.
T Consensus        75 d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~  154 (354)
T 2pbi_B           75 DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHT  154 (354)
T ss_dssp             TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred             CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccC
Confidence            5667888888888888888888888888888888988888  7899999999999999998643      3455667899


Q ss_pred             ccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe----CCCEEEEEeCCCcEEEEECCCce
Q psy9182         315 EAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       315 ~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      ..|.++.|+++  .+++++.|+.|++||+++++..   ..+.+|...|.++.+    +++++++|+.|+.|++||+++++
T Consensus       155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~  231 (354)
T 2pbi_B          155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLL---QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ  231 (354)
T ss_dssp             SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE---EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred             CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE---EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence            99999999864  8999999999999999988654   566789999998887    46899999999999999999999


Q ss_pred             EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc--ccCeEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182         389 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH--EELVRCIRF--DAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h--~~~v~~~~~--~~~~l~s~~~dg~v~iw  462 (486)
                      ++..+.+|...|.++.++  +++|++|+.|++|++||+++++.+..+..+  ...+.+++|  ++.+|++|+.||.|++|
T Consensus       232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw  311 (354)
T 2pbi_B          232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVW  311 (354)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence            999999999999999984  789999999999999999999888777644  347889999  89999999999999999


Q ss_pred             eCCCCC
Q psy9182         463 NLVAAL  468 (486)
Q Consensus       463 dl~~~~  468 (486)
                      |+.++.
T Consensus       312 d~~~~~  317 (354)
T 2pbi_B          312 DVLKGS  317 (354)
T ss_dssp             ETTTCS
T ss_pred             ECCCCc
Confidence            997653

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2.5e-32  Score=250.10  Aligned_cols=226  Identities=20%  Similarity=0.380  Sum_probs=189.5

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCC--ceeeEEEcCCcccEEEEEec----CCEEEEEeCCCcEEEEECCCCc--EEEEec
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVS--LQCIKVLTGHTGSVLCLQYD----ERVIISGSSDSTVRVWDVNTGE--MVNTLI  311 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~vwd~~~~~--~~~~~~  311 (486)
                      +++++++|++|+.|++|++||+..  .+.+..+.+|.+.|.+++|.    +++|++|+.||+|++||+++++  .+..+.
T Consensus        17 ~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~   96 (297)
T 2pm7_B           17 MDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA   96 (297)
T ss_dssp             ECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC
T ss_pred             ECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee
Confidence            345777888888888888888764  46778899999999999982    7899999999999999998874  556778


Q ss_pred             ccCccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---------------CCEEEE
Q psy9182         312 HHCEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---------------EKYIVS  372 (486)
Q Consensus       312 ~~~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~l~~  372 (486)
                      .|...|.+++|++    ..+++++.|+.|++||++.+.... ...+.+|...|.++.|.               +++|++
T Consensus        97 ~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s  175 (297)
T 2pm7_B           97 VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT  175 (297)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC------------CCEEEE
T ss_pred             cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCcccccccCCCCCCcceEEE
Confidence            8999999999986    389999999999999998764321 24566899999999983               368999


Q ss_pred             EeCCCcEEEEECCCce----EEEEEcCCcccEEEEEeCC-----CEEEEEeCCCcEEEEECCCCe---eeEEe--cCccc
Q psy9182         373 ASGDRTIKVWNTSSCE----FVRTLNGHKRGIACLQYRD-----RLVVSGSSDNTIRLWDIECGA---CLRVL--EGHEE  438 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~v~iwd~~~~~---~~~~~--~~h~~  438 (486)
                      |+.|+.|++||+++++    ....+.+|...|.+++|++     .+|++++.|++|++||++++.   ....+  ..|..
T Consensus       176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~  255 (297)
T 2pm7_B          176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD  255 (297)
T ss_dssp             EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred             EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCC
Confidence            9999999999998765    6678899999999999963     689999999999999998643   22233  56788


Q ss_pred             CeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         439 LVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       439 ~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .|.+++|  ++++|++++.||.|++|+...
T Consensus       256 ~v~~~~~s~~g~~las~~~D~~v~lw~~~~  285 (297)
T 2pm7_B          256 VLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (297)
T ss_dssp             CEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred             cEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence            9999999  889999999999999999864

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-33  Score=271.03  Aligned_cols=287  Identities=20%  Similarity=0.408  Sum_probs=229.5

Q ss_pred             ceeEEEeecc---eeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeE
Q psy9182         148 GIACLQYRDR---LVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLL  224 (486)
Q Consensus       148 ~V~~~~~~~~---~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (486)
                      .|.+++|++.   ++++++.++       ..+++.+.|+.|++||+.+..........                      
T Consensus        14 ~v~~~~~sp~g~~~l~~g~~~g-------~~~~~~~~d~~v~iw~~~~~~~~~~~~~~----------------------   64 (416)
T 2pm9_A           14 RTATFAWSHDKIPLLVSGTVSG-------TVDANFSTDSSLELWSLLAADSEKPIASL----------------------   64 (416)
T ss_dssp             ESCBCCBCSSSSCEEEEBCBSS-------CCCSSCCCCCCCEEEESSSGGGCSCSCCC----------------------
T ss_pred             hcceEeeCCCCCCEEEEEecCc-------ccccccCCCCeEEEEEccCCCCCcEEEEE----------------------
Confidence            6788888742   444443332       23555599999999998765422110000                      


Q ss_pred             EEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCC----ceeeEEEcCCcccEEEEEe--c-CCEEEEEeCCCcEE
Q psy9182         225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS----LQCIKVLTGHTGSVLCLQY--D-ERVIISGSSDSTVR  297 (486)
Q Consensus       225 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~  297 (486)
                           ........+++++++++|++|+.||.|++||+.+    .+.+..+.+|...|.+++|  + +++|++++.||.|+
T Consensus        65 -----~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  139 (416)
T 2pm9_A           65 -----QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF  139 (416)
T ss_dssp             -----CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred             -----ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence                 0112334455667899999999999999999987    4578888999999999999  4 78999999999999


Q ss_pred             EEECCCCc------EEE---EecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecC------ccc
Q psy9182         298 VWDVNTGE------MVN---TLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGH------RAA  359 (486)
Q Consensus       298 vwd~~~~~------~~~---~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~  359 (486)
                      +||+.+++      ...   ....|...|.+++|+++   .+++++.||.|++||+++++...   .+..+      ...
T Consensus       140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~~~  216 (416)
T 2pm9_A          140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI---HLSYTSPNSGIKQQ  216 (416)
T ss_dssp             BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE---EECCCCCSSCCCCC
T ss_pred             EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce---EEeccccccccCCc
Confidence            99999876      332   23568889999999854   89999999999999999876543   33333      788


Q ss_pred             EEEEEe--CC-CEEEEEeCCC---cEEEEECCCc-eEEEEEc-CCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCCe
Q psy9182         360 VNVVDF--DE-KYIVSASGDR---TIKVWNTSSC-EFVRTLN-GHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       360 v~~~~~--~~-~~l~~~~~d~---~i~iwd~~~~-~~~~~~~-~~~~~v~~~~~---~~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      +.++.|  ++ .++++++.|+   .|++||++++ +++..+. +|...|.++.|   ++++|++++.||.|++||+++++
T Consensus       217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~  296 (416)
T 2pm9_A          217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE  296 (416)
T ss_dssp             EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred             eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence            999999  43 6899999998   9999999986 6777888 89999999998   47899999999999999999999


Q ss_pred             eeEEecCcccCeEEEEe--cC-CEEEEEeCCCcEEEEeCCCCCCCC
Q psy9182         429 CLRVLEGHEELVRCIRF--DA-KRIVSGAYDGKIKVWNLVAALDPR  471 (486)
Q Consensus       429 ~~~~~~~h~~~v~~~~~--~~-~~l~s~~~dg~v~iwdl~~~~~~~  471 (486)
                      ++..+.+|...|.+++|  ++ .+|++++.||.|++||+.....+.
T Consensus       297 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~  342 (416)
T 2pm9_A          297 QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL  342 (416)
T ss_dssp             EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred             cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence            99999999999999999  55 799999999999999998876443

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.9e-32  Score=259.95  Aligned_cols=235  Identities=30%  Similarity=0.528  Sum_probs=198.6

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .+.++.|+|++++|++|+.||.|+|||+.+++.+..+.+|...|.+++|+                              
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~------------------------------  174 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF------------------------------  174 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC------------------------------
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEc------------------------------
Confidence            47899999999999999999999999999999999999999999998885                              


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ  265 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~  265 (486)
                                                                              +++++|++++.|+.|++||+.+++
T Consensus       175 --------------------------------------------------------p~~~~l~s~s~d~~v~iwd~~~~~  198 (393)
T 1erj_A          175 --------------------------------------------------------PSGDKLVSGSGDRTVRIWDLRTGQ  198 (393)
T ss_dssp             --------------------------------------------------------TTSSEEEEEETTSEEEEEETTTTE
T ss_pred             --------------------------------------------------------CCCCEEEEecCCCcEEEEECCCCe
Confidence                                                                    245567777778888888887777


Q ss_pred             eeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEe-------cccCccEEEEEEcCC--eEEEEeCC
Q psy9182         266 CIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTL-------IHHCEAVLHLRFSNG--MMVTCSKD  333 (486)
Q Consensus       266 ~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~~~~~i~~~~~~~~--~l~~~~~d  333 (486)
                      +...+. +...+.++++   +++++++|+.||.|++||+++++.+..+       .+|...|.+++|+++  .+++|+.|
T Consensus       199 ~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d  277 (393)
T 1erj_A          199 CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD  277 (393)
T ss_dssp             EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence            776665 4456777777   6789999999999999999999887776       568889999999864  89999999


Q ss_pred             CcEEEEECCCCCce---------eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182         334 RSIAVWDMVSPNEI---------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       334 g~i~i~d~~~~~~~---------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~  402 (486)
                      +.|++||+++....         .....+.+|...|.++.+  ++.+|++++.|+.|++||..+++.+..+.+|...|.+
T Consensus       278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~  357 (393)
T 1erj_A          278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS  357 (393)
T ss_dssp             SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred             CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE
Confidence            99999999764321         223456689999999998  7899999999999999999999999999999999999


Q ss_pred             EEeC--------CCEEEEEeCCCcEEEEECCCC
Q psy9182         403 LQYR--------DRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       403 ~~~~--------~~~l~~~~~dg~v~iwd~~~~  427 (486)
                      +.+.        +++|++|+.||.|++|+++..
T Consensus       358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             EEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             EEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            9874        578999999999999998643

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=5.4e-32  Score=255.66  Aligned_cols=295  Identities=15%  Similarity=0.241  Sum_probs=234.0

Q ss_pred             eeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccC---cceeecCCCCCcceeeecccccccccCCCCCC
Q psy9182         128 IKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD---EFQIVSSSHDDTILIWDFLNYSETPIQGGGGG  204 (486)
Q Consensus       128 v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~---~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~  204 (486)
                      +..|+....+.+..+.+|.+.|.+++|++               +   +.+|++++.||.|++||+.+..          
T Consensus        21 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---------------~~~~g~~l~~~~~dg~i~iw~~~~~~----------   75 (368)
T 3mmy_A           21 ATTDNHNPMKDIEVTSSPDDSIGCLSFSP---------------PTLPGNFLIAGSWANDVRCWEVQDSG----------   75 (368)
T ss_dssp             --CCSSCTTCCEECSSCCSSCEEEEEECC---------------TTSSSEEEEEEETTSEEEEEEECTTS----------
T ss_pred             eccCCCCCcceeEeccCCCCceEEEEEcC---------------CCCCceEEEEECCCCcEEEEEcCCCC----------
Confidence            34456667778888999999999999983               4   5889999999999999985411          


Q ss_pred             CCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--
Q psy9182         205 GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--  282 (486)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--  282 (486)
                                      ......+.. +......+++++++++|++++.||.|++||+.+++.+. +..|...|.++.|  
T Consensus        76 ----------------~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~  137 (368)
T 3mmy_A           76 ----------------QTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIK  137 (368)
T ss_dssp             ----------------CEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEE
T ss_pred             ----------------ceeEEEecc-ccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEe
Confidence                            111111221 22334445566789999999999999999999998776 4569999999988  


Q ss_pred             --cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeE-EeeecCccc
Q psy9182         283 --DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR-RVLVGHRAA  359 (486)
Q Consensus       283 --~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~  359 (486)
                        +++++++++.||.|++||+++++.+..+..+ ..+.++.+.++.+++++.++.+.+||++........ .....+...
T Consensus       138 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  216 (368)
T 3mmy_A          138 APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR  216 (368)
T ss_dssp             CSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred             CCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence              5678999999999999999999988888765 468888888899999999999999999876543211 111223344


Q ss_pred             EEEEEeCCCE----EEEEeCCCcEEEEECCCc---eEEEEEcCCcc------------cEEEEEeC--CCEEEEEeCCCc
Q psy9182         360 VNVVDFDEKY----IVSASGDRTIKVWNTSSC---EFVRTLNGHKR------------GIACLQYR--DRLVVSGSSDNT  418 (486)
Q Consensus       360 v~~~~~~~~~----l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~------------~v~~~~~~--~~~l~~~~~dg~  418 (486)
                      +.++.++...    +++++.|+.|++||++..   +.+..+..|..            .|.++.++  +++|++|+.||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~  296 (368)
T 3mmy_A          217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR  296 (368)
T ss_dssp             EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred             eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence            4444444443    999999999999999987   56778888876            69999985  789999999999


Q ss_pred             EEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       419 v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      |++||+++++++..+.+|...|++++|  ++.+|++++.|+..+.|++-.
T Consensus       297 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~  346 (368)
T 3mmy_A          297 FSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN  346 (368)
T ss_dssp             EEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred             EEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence            999999999999999999999999999  889999999998776666543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=4.6e-31  Score=244.22  Aligned_cols=197  Identities=26%  Similarity=0.455  Sum_probs=174.7

Q ss_pred             eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEE
Q psy9182         265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWD  340 (486)
Q Consensus       265 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d  340 (486)
                      .++..+.+|...|.++++  +++++++|+.|++|++||+++++.+..+.+|...|.+++|+++  .+++|+.|+.|++||
T Consensus        56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd  135 (319)
T 3frx_A           56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT  135 (319)
T ss_dssp             EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            456778899999999988  7899999999999999999999999999999999999999864  899999999999999


Q ss_pred             CCCCCceeeEEeeecCcccEEEEEeC--------CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182         341 MVSPNEITLRRVLVGHRAAVNVVDFD--------EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV  410 (486)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l  410 (486)
                      ++..    ....+.+|...+.++.+.        +..+++++.|+.|++||+++++....+.+|...|.++.++  +++|
T Consensus       136 ~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l  211 (319)
T 3frx_A          136 IKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLI  211 (319)
T ss_dssp             TTSC----EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEE
T ss_pred             CCCC----eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEE
Confidence            9643    235567899999999882        3489999999999999999999999999999999999985  8899


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++|+.||.|++||+.+++.+..+..+ ..|.+++|  ++.+|++++. +.+++|+++..
T Consensus       212 ~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~  268 (319)
T 3frx_A          212 ASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQ  268 (319)
T ss_dssp             EEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEET-TEEEEEEETTE
T ss_pred             EEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcC
Confidence            99999999999999999999998865 67999999  7788888775 45999998754

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=3.6e-32  Score=255.52  Aligned_cols=236  Identities=15%  Similarity=0.261  Sum_probs=191.3

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceee----ecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT----LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~----l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      .|...|.+++|+|++. +++++.||+|+|||+.+++....    ..+|...|.+++|+                      
T Consensus        92 ~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~s----------------------  148 (357)
T 4g56_B           92 QTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVF----------------------  148 (357)
T ss_dssp             ECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEEC----------------------
T ss_pred             CCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEEC----------------------
Confidence            4566799999999986 55678899999999998875432    34677777777763                      


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                                                                                      +++++|++|+.||.|+
T Consensus       149 ----------------------------------------------------------------pdg~~l~sgs~dg~v~  164 (357)
T 4g56_B          149 ----------------------------------------------------------------SDGTQAVSGGKDFSVK  164 (357)
T ss_dssp             ----------------------------------------------------------------SSSSEEEEEETTSCEE
T ss_pred             ----------------------------------------------------------------CCCCEEEEEeCCCeEE
Confidence                                                                            4677899999999999


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEe--cccCccEEEEEEcCC---eEEE
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNG---MMVT  329 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~---~l~~  329 (486)
                      +||+.+++.+..+.+|...|.+++|  ++ .++++++.||.|++||+++++....+  ..+...+.+++|+|+   ++++
T Consensus       165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~  244 (357)
T 4g56_B          165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC  244 (357)
T ss_dssp             EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred             EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence            9999999999999999999999998  33 57899999999999999998876654  346677999999853   7889


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR  406 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  406 (486)
                      |+.|+.|++||+++++..   ..+.+|...|.+++|  ++ ++|++++.|++|++||+++++++..+ +|...|++++|+
T Consensus       245 g~~d~~i~~wd~~~~~~~---~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafs  320 (357)
T 4g56_B          245 GDETGNVSLVNIKNPDSA---QTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWS  320 (357)
T ss_dssp             EESSSCEEEEESSCGGGC---EEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEEC
T ss_pred             eecccceeEEECCCCcEe---EEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEe
Confidence            999999999999987655   556789999999998  44 68999999999999999999877654 799999999984


Q ss_pred             ---CCEEEEEeCCCcEEEEECCCCe
Q psy9182         407 ---DRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       407 ---~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                         +.+|++++.||+|++|++.+..
T Consensus       321 P~d~~~l~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          321 PLDHSKFTTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             SSSTTEEEEEETTSCEEEEECC---
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCC
Confidence               6899999999999999997643

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=6.3e-32  Score=247.44  Aligned_cols=243  Identities=17%  Similarity=0.292  Sum_probs=194.4

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccc--ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSS--CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~--~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...|.+++|+|+|++||+|+.||+|+|||+.+  ++.+.++.+|.+.|.+++|++.             .++.+|++
T Consensus         6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~-------------~~g~~l~s   72 (297)
T 2pm7_B            6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-------------KFGTILAS   72 (297)
T ss_dssp             CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG-------------GGCSEEEE
T ss_pred             cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC-------------CcCCEEEE
Confidence            45778899999999999999999999999999974  4678999999999999999631             13678999


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeC--CCEEEEEecCC
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYD--DHKIVSGLRDN  254 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~--~~~l~~~~~dg  254 (486)
                      ++.|++|++||+.++....                          ...   ...+...+.  +++|+  +.+|++++.||
T Consensus        73 ~s~D~~v~iWd~~~~~~~~--------------------------~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~  123 (297)
T 2pm7_B           73 CSYDGKVMIWKEENGRWSQ--------------------------IAV---HAVHSASVNSVQWAPHEYGPMLLVASSDG  123 (297)
T ss_dssp             EETTTEEEEEEBSSSCBCC--------------------------CEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred             EcCCCEEEEEEcCCCceEE--------------------------EEE---eecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence            9999999999986432110                          001   112333444  44555  78999999999


Q ss_pred             eEEEEECCCce--eeEEEcCCcccEEEEEec---------------CCEEEEEeCCCcEEEEECCCCc----EEEEeccc
Q psy9182         255 TIKVWDRVSLQ--CIKVLTGHTGSVLCLQYD---------------ERVIISGSSDSTVRVWDVNTGE----MVNTLIHH  313 (486)
Q Consensus       255 ~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---------------~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~  313 (486)
                      .|++||+.++.  ....+.+|...|.+++|.               +++|++|+.|+.|++||+++++    ....+.+|
T Consensus       124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H  203 (297)
T 2pm7_B          124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH  203 (297)
T ss_dssp             EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred             cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence            99999998763  246678899999999984               3589999999999999998776    56778899


Q ss_pred             CccEEEEEEcCC-----eEEEEeCCCcEEEEECCCCCceeeEEee--ecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         314 CEAVLHLRFSNG-----MMVTCSKDRSIAVWDMVSPNEITLRRVL--VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       314 ~~~i~~~~~~~~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      ...|.+++|+|+     ++++++.|+.|++||++...........  ..|...|.+++|  ++++|++++.|+.|++|+.
T Consensus       204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~  283 (297)
T 2pm7_B          204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE  283 (297)
T ss_dssp             SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred             CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence            999999999874     7999999999999999875422111222  467788999988  7899999999999999997


Q ss_pred             C
Q psy9182         385 S  385 (486)
Q Consensus       385 ~  385 (486)
                      .
T Consensus       284 ~  284 (297)
T 2pm7_B          284 N  284 (297)
T ss_dssp             C
T ss_pred             C
Confidence            6

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=4.3e-32  Score=254.13  Aligned_cols=292  Identities=14%  Similarity=0.192  Sum_probs=204.8

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccc----cceeeecCcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      ..|...|.++.++|++++|++|+.||.|++||+.++    +.+..+.+|...|.+++|++.             .++.+|
T Consensus         8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~d~~~l   74 (351)
T 3f3f_A            8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP-------------EYGRII   74 (351)
T ss_dssp             CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG-------------GGCSEE
T ss_pred             cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC-------------CCCCEE
Confidence            467889999999999999999999999999999876    467778899999999999631             034455


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                      ++++.||.|++||+.+.....                                                           
T Consensus        75 ~s~~~dg~v~vwd~~~~~~~~-----------------------------------------------------------   95 (351)
T 3f3f_A           75 ASASYDKTVKLWEEDPDQEEC-----------------------------------------------------------   95 (351)
T ss_dssp             EEEETTSCEEEEEECTTSCTT-----------------------------------------------------------
T ss_pred             EEEcCCCeEEEEecCCCcccc-----------------------------------------------------------
Confidence            555555555555543211000                                                           


Q ss_pred             EEEECCCceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCcEEEEec-------------ccCccEEE
Q psy9182         257 KVWDRVSLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGEMVNTLI-------------HHCEAVLH  319 (486)
Q Consensus       257 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------~~~~~i~~  319 (486)
                         .....+.+..+..|...|.+++|  +  ++++++++.||.|++||+++++.+..+.             .+...+.+
T Consensus        96 ---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (351)
T 3f3f_A           96 ---SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC  172 (351)
T ss_dssp             ---SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred             ---cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeE
Confidence               00011556677789999999999  4  8899999999999999998876543322             46778899


Q ss_pred             EEEcC-----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC----CEEEEEeCCCcEEEEECCCce
Q psy9182         320 LRFSN-----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE----KYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       320 ~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~----~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      +.|++     ..+++++.++.+.+|+...+.. .....+.+|...|.++.|  ++    ++|++++.||.|++||++.+.
T Consensus       173 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~  251 (351)
T 3f3f_A          173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL  251 (351)
T ss_dssp             EEECCCSSSCCEEEEEETTEEEEEEECTTSCE-EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred             EEeccCCCCCcEEEEecCCCcEEEEccCCCce-eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence            99974     4899999999998777766543 344667789999999999  44    689999999999999998765


Q ss_pred             EEEEEcCCcccEEEEEeC------CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         389 FVRTLNGHKRGIACLQYR------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~~------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                      .......+..........      ......+.....+.+|+....+.+..+.+|...|++++|  ++++|++++.||.|+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~  331 (351)
T 3f3f_A          252 SPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR  331 (351)
T ss_dssp             ---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred             CccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence            544443333322222221      122233344566777877778889999999999999999  788999999999999


Q ss_pred             EEeCCCCC
Q psy9182         461 VWNLVAAL  468 (486)
Q Consensus       461 iwdl~~~~  468 (486)
                      +||+.++.
T Consensus       332 iw~~~~~~  339 (351)
T 3f3f_A          332 LWKATYSN  339 (351)
T ss_dssp             EEEECTTS
T ss_pred             EEecCcCc
Confidence            99998653

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1.4e-32  Score=254.04  Aligned_cols=241  Identities=15%  Similarity=0.241  Sum_probs=187.7

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...|.++.|+|+|++||+|+.|++|+|||+.+++  .+..+.+|...|.+++|++.             .       
T Consensus        10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~-------------~-------   69 (316)
T 3bg1_A           10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP-------------M-------   69 (316)
T ss_dssp             ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCG-------------G-------
T ss_pred             ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCC-------------C-------
Confidence            4577889999999999999999999999999998764  56789999999999998520             0       


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                      ++++|++|+.|++|++
T Consensus        70 ----------------------------------------------------------------~~~~l~s~s~D~~v~i   85 (316)
T 3bg1_A           70 ----------------------------------------------------------------YGNILASCSYDRKVII   85 (316)
T ss_dssp             ----------------------------------------------------------------GSSCEEEEETTSCEEE
T ss_pred             ----------------------------------------------------------------CCCEEEEEECCCEEEE
Confidence                                                                            2344556666666666


Q ss_pred             EECCCc--eeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCcE---EEEecccCccEEEEEEcCC----
Q psy9182         259 WDRVSL--QCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGEM---VNTLIHHCEAVLHLRFSNG----  325 (486)
Q Consensus       259 ~d~~~~--~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~i~~~~~~~~----  325 (486)
                      ||+.++  +....+.+|...|.+++|  +  +.+|++|+.||.|++||++++..   ...+..|...+.++.|+++    
T Consensus        86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  165 (316)
T 3bg1_A           86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG  165 (316)
T ss_dssp             ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred             EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence            666554  345566788888888888  3  56899999999999999876532   2344667778888888753    


Q ss_pred             ---------------eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC----CEEEEEeCCCcEEEEEC
Q psy9182         326 ---------------MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE----KYIVSASGDRTIKVWNT  384 (486)
Q Consensus       326 ---------------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~----~~l~~~~~d~~i~iwd~  384 (486)
                                     .+++|+.|+.|++||++..........+.+|...|.+++|  ++    .+|++++.|++|++||+
T Consensus       166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~  245 (316)
T 3bg1_A          166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC  245 (316)
T ss_dssp             -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred             cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence                           7999999999999999765443445667889999999999  33    78999999999999998


Q ss_pred             CCc---e-EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         385 SSC---E-FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       385 ~~~---~-~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      ++.   + ....+..|...|.+++|+  +++|++++.||.|++|+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred             cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence            762   1 234456788899999985  7899999999999999975

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=4.8e-32  Score=250.49  Aligned_cols=235  Identities=18%  Similarity=0.324  Sum_probs=195.2

Q ss_pred             CCccceE--EEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe----cCCEEEEEeCCCcEEEEECCC
Q psy9182         232 ENSKGVY--CLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY----DERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       232 ~~~~~v~--~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      +|...|.  ++++++++|++|+.|++|++||+.++.  .+..+.+|...|.+++|    ++++|++|+.|++|++||+++
T Consensus        11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~   90 (316)
T 3bg1_A           11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN   90 (316)
T ss_dssp             ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred             cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence            3444454  556689999999999999999998764  46788999999999998    278999999999999999998


Q ss_pred             C--cEEEEecccCccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-----------
Q psy9182         304 G--EMVNTLIHHCEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-----------  366 (486)
Q Consensus       304 ~--~~~~~~~~~~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-----------  366 (486)
                      +  +....+..|...|.+++|+++    ++++|+.|+.|++||++.+..........+|...+.++.|.           
T Consensus        91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~  170 (316)
T 3bg1_A           91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH  170 (316)
T ss_dssp             SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred             CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence            7  466778889999999999864    79999999999999998764433334556788888888873           


Q ss_pred             --------CCEEEEEeCCCcEEEEECCCc---eEEEEEcCCcccEEEEEeCC------CEEEEEeCCCcEEEEECCCC--
Q psy9182         367 --------EKYIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGIACLQYRD------RLVVSGSSDNTIRLWDIECG--  427 (486)
Q Consensus       367 --------~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~v~iwd~~~~--  427 (486)
                              +++|++++.|+.|++||++..   +.+..+.+|...|.+++|+.      .+|++|+.||+|++||+++.  
T Consensus       171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~  250 (316)
T 3bg1_A          171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS  250 (316)
T ss_dssp             CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC
T ss_pred             ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc
Confidence                    368999999999999999754   56778899999999999952      68999999999999999762  


Q ss_pred             -e-eeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         428 -A-CLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       428 -~-~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                       + ....+..|...|.+++|  ++++|++++.||+|++|+...
T Consensus       251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          251 NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence             1 23345678899999999  889999999999999999763

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=8.1e-31  Score=274.13  Aligned_cols=286  Identities=21%  Similarity=0.394  Sum_probs=242.0

Q ss_pred             cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccc
Q psy9182         137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENN  216 (486)
Q Consensus       137 ~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (486)
                      +..+.+.+|.+.|.+++|+               +++..|++++.||.|++||+.++..                     
T Consensus         4 ~~~~~~~~h~~~v~~i~~s---------------p~~~~la~~~~~g~v~iwd~~~~~~---------------------   47 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFH---------------PTEPWVLTTLYSGRVEIWNYETQVE---------------------   47 (814)
T ss_dssp             CCEEEEEEECSCEEEEEEC---------------SSSSEEEEEETTSEEEEEETTTTEE---------------------
T ss_pred             ccceeeecCCCceEEEEEC---------------CCCCEEEEEeCCCEEEEEECCCCce---------------------
Confidence            4567889999999999998               6888899999999999999855321                     


Q ss_pred             cccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182         217 WRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS  294 (486)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  294 (486)
                             ...+. .+.......++++++++|++|+.||.|++||+.+++.+..+.+|...|.+++|  +++++++++.||
T Consensus        48 -------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  119 (814)
T 3mkq_A           48 -------VRSIQ-VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL  119 (814)
T ss_dssp             -------EEEEE-CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred             -------EEEEe-cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC
Confidence                   22222 12234455667889999999999999999999999999999999999999999  788999999999


Q ss_pred             cEEEEECCCC-cEEEEecccCccEEEEEEcC-C--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe----C
Q psy9182         295 TVRVWDVNTG-EMVNTLIHHCEAVLHLRFSN-G--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----D  366 (486)
Q Consensus       295 ~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~-~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~----~  366 (486)
                      .|++||+.++ .....+..|...+.+++|++ +  .+++++.||.|++||+.++....  .....+...+.++.+    +
T Consensus       120 ~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~  197 (814)
T 3mkq_A          120 TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPD  197 (814)
T ss_dssp             EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCCCEEEECCSTT
T ss_pred             EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee--EEecCCCCCEEEEEEEECCC
Confidence            9999999987 67778888999999999987 3  89999999999999998776543  223344477777777    6


Q ss_pred             CCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEE
Q psy9182         367 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR  444 (486)
Q Consensus       367 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  444 (486)
                      +.++++++.||.|++||+.+++.+..+.+|...+.++.++  ++++++++.||.|++||+.+++.+..+..|...+.+++
T Consensus       198 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~  277 (814)
T 3mkq_A          198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIA  277 (814)
T ss_dssp             CCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEE
Confidence            8899999999999999999999999999999999999985  78999999999999999999999999999999999999


Q ss_pred             e--cCCE-EEEEeCCCcEEEEeCCCCC
Q psy9182         445 F--DAKR-IVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       445 ~--~~~~-l~s~~~dg~v~iwdl~~~~  468 (486)
                      |  ++.. +++++.|+.+.+|++....
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (814)
T 3mkq_A          278 THPTGRKNYIASGFDNGFTVLSLGNDE  304 (814)
T ss_dssp             ECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred             EccCCCceEEEEEeCCCEEEEEcCCCC
Confidence            9  4442 3555557779999987643

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.7e-31  Score=258.08  Aligned_cols=310  Identities=15%  Similarity=0.221  Sum_probs=220.7

Q ss_pred             ccccccccCCccCcceEEEeecCceeeeccccccc-----------ceeeecCcc------------cceeEEEeeccee
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE-----------FVRTLNGHK------------RGIACLQYRDRLV  159 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~-----------~~~~l~~h~------------~~V~~~~~~~~~~  159 (486)
                      +...|.++.++|+|++||+|+.||.|+|||+.+++           .+..+.+|.            ..|.+++|++   
T Consensus        27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~---  103 (447)
T 3dw8_B           27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP---  103 (447)
T ss_dssp             GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC---
T ss_pred             ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC---
Confidence            45678999999999999999999999999999877           588899998            8899999973   


Q ss_pred             EecCCCCceeccCc--ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce
Q psy9182         160 VSGSSDNTIRYRDE--FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV  237 (486)
Q Consensus       160 ~~~~~d~~i~~~~~--~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  237 (486)
                                  ++  ..|++++.|+.|++||+.+........                           . ...+....
T Consensus       104 ------------~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~---------------------------~-~~~~~g~~  143 (447)
T 3dw8_B          104 ------------QKNAAQFLLSTNDKTIKLWKISERDKRPEGY---------------------------N-LKEEDGRY  143 (447)
T ss_dssp             ------------CCSSSEEEEEECSSCEEEEEEEEEEEEEECC---------------------------S-CC------
T ss_pred             ------------CCCcceEEEeCCCCeEEEEecccccCCccee---------------------------c-ccCccccc
Confidence                        44  678999999999999986533211000                           0 00000000


Q ss_pred             EEEEeCCCE-EEEEecCCeEEEEECCCceeeEEE-cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC-CcEEEE---
Q psy9182         238 YCLQYDDHK-IVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT-GEMVNT---  309 (486)
Q Consensus       238 ~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~---  309 (486)
                      .....-... +......+    |.. .......+ .+|...|.+++|  ++++|++| .||.|++||+++ ++....   
T Consensus       144 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~  217 (447)
T 3dw8_B          144 RDPTTVTTLRVPVFRPMD----LMV-EASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDI  217 (447)
T ss_dssp             --CCCCCSCCCCEEEEEE----EEE-EEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEEC
T ss_pred             cCcccccceEeccccchh----eee-eccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeec
Confidence            000000000 00000000    100 11223333 679999999999  78899998 799999999984 444442   


Q ss_pred             ----ecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCce-eeEEeeecCcc------------cEEEEEe--CC
Q psy9182         310 ----LIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRA------------AVNVVDF--DE  367 (486)
Q Consensus       310 ----~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~------------~v~~~~~--~~  367 (486)
                          +..|...|.+++|++   ..+++|+.||.|++||+++++.. .....+..|..            .|.++.|  ++
T Consensus       218 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g  297 (447)
T 3dw8_B          218 KPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG  297 (447)
T ss_dssp             CCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS
T ss_pred             ccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC
Confidence                457889999999986   47999999999999999987641 11244555554            8999999  78


Q ss_pred             CEEEEEeCCCcEEEEECCC-ceEEEEEcCCcccE-----------------EEEEeCCCEEEEEeCCCcEEEEECCCCee
Q psy9182         368 KYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGI-----------------ACLQYRDRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       368 ~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v-----------------~~~~~~~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      ++|++++. +.|++||+++ ++++..+.+|...+                 .++..++++|++|+.||.|++||+.+++.
T Consensus       298 ~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~  376 (447)
T 3dw8_B          298 RYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD  376 (447)
T ss_dssp             SEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred             CEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence            89999999 9999999997 88888898886422                 23444689999999999999999998887


Q ss_pred             eEEecC---------------------------------cccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         430 LRVLEG---------------------------------HEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       430 ~~~~~~---------------------------------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      +. +.+                                 +...|..++|  ++++|++++.++ +++|.-
T Consensus       377 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          377 IT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             EE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred             ee-eeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence            63 222                                 2346888999  888999988776 888864

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-31  Score=256.56  Aligned_cols=267  Identities=15%  Similarity=0.240  Sum_probs=201.4

Q ss_pred             CCccCcceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceecc-CcceeecCCCCCcceee
Q psy9182         111 LPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYR-DEFQIVSSSHDDTILIW  188 (486)
Q Consensus       111 ~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~-~~~~l~s~s~dg~i~vW  188 (486)
                      .|+|++..+++++      .|+ .+++++..+ .+|.+.|.+++|+               + ++.+|++++.||+|++|
T Consensus        34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s---------------~~~~~~l~s~s~dg~v~vw   91 (437)
T 3gre_A           34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVS---------------PGETPYLITGSDQGVIKIW   91 (437)
T ss_dssp             GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEE---------------CSSSCEEEEEETTSEEEEE
T ss_pred             hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEEC---------------CCCCCEEEEecCCceEEEe
Confidence            4678888888776      498 557889998 8999999999997               3 55566666666666666


Q ss_pred             ecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeE
Q psy9182         189 DFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK  268 (486)
Q Consensus       189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  268 (486)
                      |+.+.....                                                                 ..+...
T Consensus        92 d~~~~~~~~-----------------------------------------------------------------~~~~~~  106 (437)
T 3gre_A           92 NLKEIIVGE-----------------------------------------------------------------VYSSSL  106 (437)
T ss_dssp             EHHHHHTTC-----------------------------------------------------------------CCSCSE
T ss_pred             ECcccccCc-----------------------------------------------------------------ccceee
Confidence            653311000                                                                 001111


Q ss_pred             EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC---CCcEEEEecc------------cCccEEEEEEc----CCeE
Q psy9182         269 VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN---TGEMVNTLIH------------HCEAVLHLRFS----NGMM  327 (486)
Q Consensus       269 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~------------~~~~i~~~~~~----~~~l  327 (486)
                      .+ .|...|.+++|  ++++|++|+.||.|++||+.   +++.......            +...+.++.+.    +..+
T Consensus       107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l  185 (437)
T 3gre_A          107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL  185 (437)
T ss_dssp             EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred             ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence            22 26677777777  56777777778888888773   4444333221            34556666643    4499


Q ss_pred             EEEeCCCcEEEEECCCCCceeeEEeeec--CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc-CCcccEEE
Q psy9182         328 VTCSKDRSIAVWDMVSPNEITLRRVLVG--HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIAC  402 (486)
Q Consensus       328 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~  402 (486)
                      ++++.|+.|++||+++++..   ..+.+  |...|.++.|  ++++|++++.||.|++||+++++++..+. .|...|.+
T Consensus       186 ~~~~~d~~i~iwd~~~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~  262 (437)
T 3gre_A          186 VALTNLSRVIIFDIRTLERL---QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITH  262 (437)
T ss_dssp             EEEETTSEEEEEETTTCCEE---EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEE
T ss_pred             EEEeCCCeEEEEeCCCCeee---EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEE
Confidence            99999999999999988755   34444  7889999999  78999999999999999999999999987 78889999


Q ss_pred             EEeC------CCEEEEEeCCCcEEEEECCCCeeeEEecC--------------------------cccCeEEEEe-cCCE
Q psy9182         403 LQYR------DRLVVSGSSDNTIRLWDIECGACLRVLEG--------------------------HEELVRCIRF-DAKR  449 (486)
Q Consensus       403 ~~~~------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------------------------h~~~v~~~~~-~~~~  449 (486)
                      +.+.      +.+|++|+.||.|++||+++++++..+.+                          |...|++++| ++++
T Consensus       263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~  342 (437)
T 3gre_A          263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKI  342 (437)
T ss_dssp             EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEE
T ss_pred             EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceE
Confidence            9664      45899999999999999999998888764                          4456888888 6778


Q ss_pred             EEEEeCCCcEEEEeCCCCC
Q psy9182         450 IVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       450 l~s~~~dg~v~iwdl~~~~  468 (486)
                      |++|+.||.|++||+.++.
T Consensus       343 l~s~~~d~~i~~wd~~~~~  361 (437)
T 3gre_A          343 LLTDEATSSIVMFSLNELS  361 (437)
T ss_dssp             EEEEGGGTEEEEEETTCGG
T ss_pred             EEecCCCCeEEEEECCCcc
Confidence            9999999999999998654

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=6.1e-30  Score=239.35  Aligned_cols=235  Identities=25%  Similarity=0.408  Sum_probs=194.6

Q ss_pred             cCCCccceEEEEe--------CCCEEEEEecCCeEEEEECCC-------ceeeEEEcCCcccEEEEEe--cCCEEEEEeC
Q psy9182         230 RSENSKGVYCLQY--------DDHKIVSGLRDNTIKVWDRVS-------LQCIKVLTGHTGSVLCLQY--DERVIISGSS  292 (486)
Q Consensus       230 ~~~~~~~v~~~~~--------~~~~l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  292 (486)
                      ..+|...|.++.+        ++++|++|+.|++|++||+.+       +.....+.+|...|.++++  ++.++++|+.
T Consensus        17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~   96 (343)
T 2xzm_R           17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW   96 (343)
T ss_dssp             EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred             eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence            4467777777754        788999999999999999864       4567788999999999998  7889999999


Q ss_pred             CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--C-
Q psy9182         293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--E-  367 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~-  367 (486)
                      |++|++||+++++.+..+.+|...|.+++|+++  .+++++.|+.|++||+.... ........+|...+.++.|.  + 
T Consensus        97 D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~  175 (343)
T 2xzm_R           97 DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMK  175 (343)
T ss_dssp             TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCC
T ss_pred             CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccc
Confidence            999999999999999999999999999999864  89999999999999997432 21112223688889999983  2 


Q ss_pred             ---------CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC-CeeeEEecC
Q psy9182         368 ---------KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEG  435 (486)
Q Consensus       368 ---------~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~  435 (486)
                               .++++++.|+.|++|| ...+....+.+|...|.+++|+  +++|++|+.||.|++||+.+ ......+. 
T Consensus       176 ~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-  253 (343)
T 2xzm_R          176 SANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-  253 (343)
T ss_dssp             SCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-
T ss_pred             cccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-
Confidence                     6899999999999999 4567788899999999999984  88999999999999999944 44444443 


Q ss_pred             cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         436 HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       436 h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +...|.+++|  ++.+++ ++.|+.|++||+.+..
T Consensus       254 ~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~  287 (343)
T 2xzm_R          254 AGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQS  287 (343)
T ss_dssp             CSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCC
T ss_pred             CCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCC
Confidence            4567999999  555555 5568889999998754

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-30  Score=249.43  Aligned_cols=290  Identities=10%  Similarity=0.114  Sum_probs=220.6

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .+..-+.++.++|||+++||++.|++|+  |..   ..+.+++|...|.+++|+|               ++       .
T Consensus        13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~---~~~~l~gh~~~v~~V~FsP---------------dg-------~   65 (588)
T 2j04_A           13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPK---YAKDINCNSKNLFHVKEFP---------------LE-------F   65 (588)
T ss_dssp             CCSSSSCCEEECTTSCEEEECSSSEEEE--EEC---CCSCCSSBGGGTEEEEEEC---------------CC-------C
T ss_pred             HhhccEEEEEECCCCCEEEEEcCCceee--ccc---ccceecCCCccEEEEEECC---------------CC-------C
Confidence            3456788999999999999999999999  644   4455689999999999974               33       3


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      ++.+.+|+.....   ....                            ........++++|+|+.||+++.||.|++||.
T Consensus        66 ~~~~~~~~~~~~~---~~~~----------------------------~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~  114 (588)
T 2j04_A           66 ENKLDFELAQQNG---LLNS----------------------------QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKD  114 (588)
T ss_dssp             CCTTTTSCCCSSC---SSTT----------------------------SCSCCEEEEEECSSSSCEEEEETTSCEEEEET
T ss_pred             cceEEEEeCCCce---Eeec----------------------------CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence            5555555532111   1100                            01234556778889999999999999999995


Q ss_pred             CCceeeEEEcCCcc-----cEEEEEe--cCCEEEEEeCCCcEEEEECCCCc-------EEEEe----cccCccEEEEEEc
Q psy9182         262 VSLQCIKVLTGHTG-----SVLCLQY--DERVIISGSSDSTVRVWDVNTGE-------MVNTL----IHHCEAVLHLRFS  323 (486)
Q Consensus       262 ~~~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~-------~~~~~----~~~~~~i~~~~~~  323 (486)
                      ..  ++..+. |..     .+.+++|  ||++|++|+.||+|++||+.++.       .+.++    .+|...|.+++|+
T Consensus       115 ~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS  191 (588)
T 2j04_A          115 NK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY  191 (588)
T ss_dssp             TE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred             Cc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence            44  666666 665     4899998  89999999999999999999885       35666    5677899999999


Q ss_pred             CCeEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182         324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       324 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~  402 (486)
                      |+-+++++.|+.|++||+..+........+ .+|...|.+++|.++.+++++ ++.|++||+.+++......+|...+..
T Consensus       192 PdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~  270 (588)
T 2j04_A          192 EDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHI  270 (588)
T ss_dssp             TTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCE
T ss_pred             CCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEE
Confidence            877999999999999999887643222334 478889999999778999887 699999999988874444489999998


Q ss_pred             EEe--C--CCEEEEEeCCCcEEEEECCC-----------------------CeeeEEecCcccCeEEEEe--cCCEEEEE
Q psy9182         403 LQY--R--DRLVVSGSSDNTIRLWDIEC-----------------------GACLRVLEGHEELVRCIRF--DAKRIVSG  453 (486)
Q Consensus       403 ~~~--~--~~~l~~~~~dg~v~iwd~~~-----------------------~~~~~~~~~h~~~v~~~~~--~~~~l~s~  453 (486)
                      +.+  +  +..+++++.||+ ++|..+.                       +..+..++ +...|.+++|  ||+.+|++
T Consensus       271 va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~lA~~  348 (588)
T 2j04_A          271 IPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSIAIV  348 (588)
T ss_dssp             EEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEEEEE
T ss_pred             EEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEEEEE
Confidence            888  4  567999999999 9998752                       01111111 2345888888  88888887


Q ss_pred             eC
Q psy9182         454 AY  455 (486)
Q Consensus       454 ~~  455 (486)
                      +.
T Consensus       349 ~~  350 (588)
T 2j04_A          349 YD  350 (588)
T ss_dssp             EE
T ss_pred             Ee
Confidence            63

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=2.4e-30  Score=242.96  Aligned_cols=288  Identities=14%  Similarity=0.160  Sum_probs=208.8

Q ss_pred             ecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCC
Q psy9182         130 VWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPS  209 (486)
Q Consensus       130 iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~  209 (486)
                      ||++.+.+.+.++.+|...|.+++|+               +|+.+|++|+.++ +++||+.+....             
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs---------------~dg~~la~g~~~~-~~iw~~~~~~~~-------------   53 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFN---------------QDQSCLILSTLKS-FEIYNVHPVAHI-------------   53 (355)
T ss_dssp             ----------------CCCCCEEEEC---------------TTSSEEEEECSSE-EEEEEETTEEEE-------------
T ss_pred             cccccccCCccccccCCCceEEEEEC---------------CCCCEEEEEcCCE-EEEEecCCccee-------------
Confidence            57777888888889999999999998               6788888888775 789997543211             


Q ss_pred             CcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEE
Q psy9182         210 GPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVII  288 (486)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~  288 (486)
                                     ...   ......+.++.++++.+ ++++.|+.|++||..+++.+..+. +...|.++.++++.++
T Consensus        54 ---------------~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~  114 (355)
T 3vu4_A           54 ---------------MSQ---EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIV  114 (355)
T ss_dssp             ---------------EEE---ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEE
T ss_pred             ---------------eee---ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEE
Confidence                           001   11235566777777776 567888999999999999999887 6678999999888777


Q ss_pred             EEeCCCcEEEEECCCC-cEEEEecccCccEEEEEEcCCeEEE--EeCCCcEEEEECCCCCce------------ee-EEe
Q psy9182         289 SGSSDSTVRVWDVNTG-EMVNTLIHHCEAVLHLRFSNGMMVT--CSKDRSIAVWDMVSPNEI------------TL-RRV  352 (486)
Q Consensus       289 ~~~~dg~i~vwd~~~~-~~~~~~~~~~~~i~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~------------~~-~~~  352 (486)
                      ++. |+.|++||+.++ +.+..+..   ....++++++.+++  |+.+|.|++||+.++...            .. ...
T Consensus       115 ~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~  190 (355)
T 3vu4_A          115 VSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL  190 (355)
T ss_dssp             EEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEE
T ss_pred             EEE-cCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE
Confidence            765 789999999988 65555544   33344555677776  578999999999875411            01 356


Q ss_pred             eecCcccEEEEEe--CCCEEEEEeCCCc-EEEEECCCceEEEEEc-C-CcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         353 LVGHRAAVNVVDF--DEKYIVSASGDRT-IKVWNTSSCEFVRTLN-G-HKRGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       353 ~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~-~-~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      +.+|...|.+++|  ++++|++++.|++ |++||+++++++..+. + |...|.+++|+  +++|++++.|++|++||++
T Consensus       191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~  270 (355)
T 3vu4_A          191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF  270 (355)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred             EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence            7789999999999  8899999999998 9999999999999998 5 99999999995  7899999999999999997


Q ss_pred             CCee--eEEec---------------------CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         426 CGAC--LRVLE---------------------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       426 ~~~~--~~~~~---------------------~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      .+..  ...+.                     .+......++|  ++++|++++.||.+++|++..+.+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~  339 (355)
T 3vu4_A          271 NDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE  339 (355)
T ss_dssp             CCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred             CCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence            6531  11111                     11223366888  888999999999999999986543

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.98  E-value=6e-31  Score=248.47  Aligned_cols=278  Identities=14%  Similarity=0.196  Sum_probs=220.9

Q ss_pred             ccccccccccCCccC---cceEEEeecCceeeeccccc-ccce-eeecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         101 PMLQRDFISLLPNFD---EKYIVSASGDRTIKVWNTSS-CEFV-RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~---~~~l~tg~~dg~v~iWd~~~-~~~~-~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      ..|...|.++.++|+   |++|++|+.||.|+|||+.+ +..+ ..+.+|...|.+++|+               +++.+
T Consensus        36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~---------------~~~~~  100 (368)
T 3mmy_A           36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWS---------------DDGSK  100 (368)
T ss_dssp             SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEEC---------------TTSSE
T ss_pred             cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEEC---------------cCCCE
Confidence            557788999999999   69999999999999999997 5554 7889999999999997               57788


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEE--EeCCCEEEEEecC
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL--QYDDHKIVSGLRD  253 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d  253 (486)
                      |++++.||.|++||+.+....                            . ... .......+++  ++++.++++++.|
T Consensus       101 l~s~~~dg~v~iwd~~~~~~~----------------------------~-~~~-~~~~v~~~~~~~~~~~~~l~~~~~d  150 (368)
T 3mmy_A          101 VFTASCDKTAKMWDLSSNQAI----------------------------Q-IAQ-HDAPVKTIHWIKAPNYSCVMTGSWD  150 (368)
T ss_dssp             EEEEETTSEEEEEETTTTEEE----------------------------E-EEE-CSSCEEEEEEEECSSCEEEEEEETT
T ss_pred             EEEEcCCCcEEEEEcCCCCce----------------------------e-ecc-ccCceEEEEEEeCCCCCEEEEccCC
Confidence            999999999999998653311                            1 111 1222333344  5578889999999


Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec--ccCccEEEEEE--cCC----
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRF--SNG----  325 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~--~~~----  325 (486)
                      |.|++||+.+++.+..+..+. .+.++.+.+..+++++.++.+.+||++.........  .....+.++.+  ...    
T Consensus       151 g~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (368)
T 3mmy_A          151 KTLKFWDTRSSNPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPT  229 (368)
T ss_dssp             SEEEEECSSCSSCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEE
T ss_pred             CcEEEEECCCCcEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCC
Confidence            999999999999999888664 678888888899999999999999998765543332  22333444443  333    


Q ss_pred             eEEEEeCCCcEEEEECCCCCceeeEEeeecCcc------------cEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA------------AVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       326 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------------~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      .+++++.||.|++||++..........+..|..            .|.++.|  ++++|++++.||.|++||+.+++++.
T Consensus       230 ~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~  309 (368)
T 3mmy_A          230 GFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK  309 (368)
T ss_dssp             EEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred             eEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence            499999999999999988754333345556655            6999998  78899999999999999999999999


Q ss_pred             EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182         392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~  424 (486)
                      .+..|...|.+++|+  +++|++++.|+..+.|++
T Consensus       310 ~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~  344 (368)
T 3mmy_A          310 TSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF  344 (368)
T ss_dssp             ECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred             EecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence            999999999999994  889999999886555543

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.98  E-value=6.1e-30  Score=242.66  Aligned_cols=224  Identities=20%  Similarity=0.377  Sum_probs=189.6

Q ss_pred             eCCCEEEEEecCCeEEEEECC--CceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEeccc
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRV--SLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHH  313 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~  313 (486)
                      +++++|++|+.||.|++||+.  +++.+..+.+|...|.+++|  +  +++|++++.||.|++||+.+++  .+..+..|
T Consensus        21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  100 (379)
T 3jrp_A           21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH  100 (379)
T ss_dssp             SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred             CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC
Confidence            456677777778888888776  56677888899999999998  3  8999999999999999999987  67778889


Q ss_pred             CccEEEEEEcCC----eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---------------CCEEEEEe
Q psy9182         314 CEAVLHLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---------------EKYIVSAS  374 (486)
Q Consensus       314 ~~~i~~~~~~~~----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~l~~~~  374 (486)
                      ...|.+++|+++    .+++++.|+.|++||++...... ......|...|.++.|.               +.++++++
T Consensus       101 ~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  179 (379)
T 3jrp_A          101 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG  179 (379)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEEEEECCCC----------CTTCEEEEEE
T ss_pred             CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe
Confidence            999999999854    89999999999999998875432 23456789999999983               68999999


Q ss_pred             CCCcEEEEECCCce----EEEEEcCCcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCCe---eeEEe--cCcccCe
Q psy9182         375 GDRTIKVWNTSSCE----FVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGA---CLRVL--EGHEELV  440 (486)
Q Consensus       375 ~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~---~~~~~--~~h~~~v  440 (486)
                      .|+.|++||+++++    ....+.+|...|.++.|+     +++|++++.||.|++||++++.   ....+  ..|...|
T Consensus       180 ~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v  259 (379)
T 3jrp_A          180 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL  259 (379)
T ss_dssp             TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred             CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcE
Confidence            99999999998753    556788999999999995     6789999999999999998864   22222  3488899


Q ss_pred             EEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         441 RCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       441 ~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ++++|  ++++|++++.||.|++|++..
T Consensus       260 ~~~~~s~~g~~l~~~~~dg~i~iw~~~~  287 (379)
T 3jrp_A          260 WRASWSLSGNVLALSGGDNKVTLWKENL  287 (379)
T ss_dssp             EEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred             EEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence            99999  889999999999999999984

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.98  E-value=8.6e-29  Score=228.29  Aligned_cols=219  Identities=29%  Similarity=0.486  Sum_probs=192.8

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC---cEEEEecccCcc
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG---EMVNTLIHHCEA  316 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~  316 (486)
                      ++++++++|+.||.|++||+.+++....+..|...|.+++|  +++++++++.||.|++|++...   +.+..+..|...
T Consensus        27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~  106 (313)
T 3odt_A           27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGN  106 (313)
T ss_dssp             EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSC
T ss_pred             cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccC
Confidence            47788999999999999999999999999999999999998  7899999999999999998754   567778889999


Q ss_pred             EEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       317 i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      |.++.++++.+++++.||.|++||  ..+   .......|...+.++.+   +++++++++.|+.|++||  ..+....+
T Consensus       107 i~~~~~~~~~l~~~~~d~~i~~~d--~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~  179 (313)
T 3odt_A          107 VCSLSFQDGVVISGSWDKTAKVWK--EGS---LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTF  179 (313)
T ss_dssp             EEEEEEETTEEEEEETTSEEEEEE--TTE---EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEE
T ss_pred             EEEEEecCCEEEEEeCCCCEEEEc--CCc---EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEE
Confidence            999999999999999999999999  222   33556678889988887   789999999999999999  55677777


Q ss_pred             cC-CcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         394 NG-HKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       394 ~~-~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      .. |...+.++.++ +..+++++.||.|++||+++++.+..+.+|...|++++|  ++ .|++++.||.|++||+.++.
T Consensus       180 ~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~  257 (313)
T 3odt_A          180 SGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS  257 (313)
T ss_dssp             CSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC
T ss_pred             eccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc
Confidence            77 88999999885 344999999999999999999999999999999999999  44 79999999999999998764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.97  E-value=8.1e-31  Score=247.46  Aligned_cols=241  Identities=19%  Similarity=0.356  Sum_probs=201.4

Q ss_pred             ccccccccccCCccC----cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         101 PMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      +.+...+.+++++|+    +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|++                    
T Consensus        66 ~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~--------------------  125 (366)
T 3k26_A           66 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP--------------------  125 (366)
T ss_dssp             SCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECS--------------------
T ss_pred             cCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECC--------------------
Confidence            345677999999999    67999999999999999999999999999999999998852                    


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                                                                                       .++.++++|+.||.|
T Consensus       126 -----------------------------------------------------------------~~~~~l~s~~~dg~i  140 (366)
T 3k26_A          126 -----------------------------------------------------------------RDPNLLLSVSKDHAL  140 (366)
T ss_dssp             -----------------------------------------------------------------SCTTEEEEEETTSCE
T ss_pred             -----------------------------------------------------------------CCCCEEEEEeCCCeE
Confidence                                                                             045667888888888


Q ss_pred             EEEECCCceeeEEE---cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec--------------------
Q psy9182         257 KVWDRVSLQCIKVL---TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI--------------------  311 (486)
Q Consensus       257 ~i~d~~~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------  311 (486)
                      ++||+.+++.+..+   .+|...|.++.|  +++++++++.||.|++||+++++....+.                    
T Consensus       141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (366)
T 3k26_A          141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH  220 (366)
T ss_dssp             EEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred             EEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence            88888888888887   678899999988  67899999999999999998765443332                    


Q ss_pred             --------ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc-----------eeeEEeeecCcccEEEEEe--C--CC
Q psy9182         312 --------HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE-----------ITLRRVLVGHRAAVNVVDF--D--EK  368 (486)
Q Consensus       312 --------~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~~v~~~~~--~--~~  368 (486)
                              .|...|.++.|+++.+++++.|+.|++||+.+...           ......+..|...|.++.+  +  ++
T Consensus       221 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  300 (366)
T 3k26_A          221 FPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK  300 (366)
T ss_dssp             CCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS
T ss_pred             cCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc
Confidence                    38889999999999999999999999999987643           1234556678888887777  6  89


Q ss_pred             EEEEEeCCCcEEEEECCCce----EEEEEcCC--cccEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182         369 YIVSASGDRTIKVWNTSSCE----FVRTLNGH--KRGIACLQYR--DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~~----~~~~~~~~--~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~  426 (486)
                      +|++++.||.|++||+.+++    ....+..|  ...|.++.|+  +++|++++.||.|++||+.+
T Consensus       301 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~  366 (366)
T 3k26_A          301 MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR  366 (366)
T ss_dssp             EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred             EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence            99999999999999999875    44577877  7899999995  88999999999999999853

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.97  E-value=2.3e-29  Score=240.50  Aligned_cols=242  Identities=15%  Similarity=0.255  Sum_probs=211.5

Q ss_pred             EEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCce------eeEEEcCCcccEEEEEe--c----C---CEEEE
Q psy9182         225 QRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ------CIKVLTGHTGSVLCLQY--D----E---RVIIS  289 (486)
Q Consensus       225 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~v~~~~~--~----~---~~l~~  289 (486)
                      ........|...+.++.+++++|++|+.||.|++||+.+++      .+..+.+|...|.++.|  +    +   ++|++
T Consensus         7 ~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s   86 (397)
T 1sq9_A            7 ATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT   86 (397)
T ss_dssp             EEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred             hhhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence            33444567888999999988999999999999999999987      78888899999999998  6    7   89999


Q ss_pred             EeCCCcEEEEECCCCcE-----EEEeccc-----CccEEEEEEc----CC--e-EEEEeCCCcEEEEECCC------CCc
Q psy9182         290 GSSDSTVRVWDVNTGEM-----VNTLIHH-----CEAVLHLRFS----NG--M-MVTCSKDRSIAVWDMVS------PNE  346 (486)
Q Consensus       290 ~~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~--~-l~~~~~dg~i~i~d~~~------~~~  346 (486)
                      ++.||.|++||+.+++.     ...+..|     ...|.++.|+    ++  . +++++.||.|++||+..      ++.
T Consensus        87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  166 (397)
T 1sq9_A           87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT  166 (397)
T ss_dssp             EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred             EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence            99999999999998886     8888888     5899999999    54  7 99999999999999988      544


Q ss_pred             ee--eEEee-------ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC---C---cccEEEEEeC--C
Q psy9182         347 IT--LRRVL-------VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG---H---KRGIACLQYR--D  407 (486)
Q Consensus       347 ~~--~~~~~-------~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~~--~  407 (486)
                      ..  ....+       ..|...+.++.+  ++ ++++++.|+.|++||+++++.+..+..   |   ...+.++.++  +
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~  245 (397)
T 1sq9_A          167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG  245 (397)
T ss_dssp             TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred             eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence            32  00122       447888999998  57 999999999999999999999999998   9   9999999994  8


Q ss_pred             CEEEEEeCC---CcEEEEECCCCeeeEEecC-------------cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         408 RLVVSGSSD---NTIRLWDIECGACLRVLEG-------------HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       408 ~~l~~~~~d---g~v~iwd~~~~~~~~~~~~-------------h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++|++++.|   |.|++||+++++.+..+.+             |...|.+++|  ++++|++++.||.|++||+.+.
T Consensus       246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  323 (397)
T 1sq9_A          246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK  323 (397)
T ss_dssp             TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred             CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            999999999   9999999999999999998             9999999999  7899999999999999999865

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.97  E-value=3.5e-29  Score=256.61  Aligned_cols=222  Identities=32%  Similarity=0.548  Sum_probs=185.0

Q ss_pred             CEEEEEecCCeEEEEECCC-----ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         245 HKIVSGLRDNTIKVWDRVS-----LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      ++|++|+.||+|++||+.+     +.....+.+|...|.++++  ++++|++|+.||.|++||+.+++....+.+|...|
T Consensus       396 ~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v  475 (694)
T 3dm0_A          396 DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDV  475 (694)
T ss_dssp             SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred             CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCE
Confidence            4555666666666665543     3345678899999999998  78999999999999999999999999999999999


Q ss_pred             EEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC--CEEEEEeCCCcEEEEECCCceEEE
Q psy9182         318 LHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE--KYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       318 ~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      .+++|+++  .+++++.|+.|++||..............+|...|.++.|  ++  ..+++++.|+.|++||+++++...
T Consensus       476 ~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~  555 (694)
T 3dm0_A          476 LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS  555 (694)
T ss_dssp             EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred             EEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE
Confidence            99999864  8999999999999998665433222233578889999999  32  589999999999999999999999


Q ss_pred             EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         392 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+.+|...|.++.++  +++|++|+.||.|++||+++++.+..+.. ...|.+++|  ++.+|+++ .|+.|++||+.++
T Consensus       556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~  633 (694)
T 3dm0_A          556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAA-TEHGIKIWDLESK  633 (694)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEE-ETTEEEEEETTTT
T ss_pred             EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEE-cCCCEEEEECCCC
Confidence            999999999999995  88999999999999999999999888765 467999999  55555555 5677999999875


Q ss_pred             C
Q psy9182         468 L  468 (486)
Q Consensus       468 ~  468 (486)
                      .
T Consensus       634 ~  634 (694)
T 3dm0_A          634 S  634 (694)
T ss_dssp             E
T ss_pred             C
Confidence            3

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2e-29  Score=239.08  Aligned_cols=243  Identities=20%  Similarity=0.293  Sum_probs=202.9

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccc--cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~--~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...|.+++++|++++|++|+.||.|+|||+.  +++.+..+.+|...|.+++|++.                     
T Consensus         8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~---------------------   66 (379)
T 3jrp_A            8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP---------------------   66 (379)
T ss_dssp             EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG---------------------
T ss_pred             cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC---------------------
Confidence            4677889999999999999999999999999998  67788899999999999988520                     


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                     .++.+|++++.||.|++
T Consensus        67 ---------------------------------------------------------------~~~~~l~s~~~dg~v~i   83 (379)
T 3jrp_A           67 ---------------------------------------------------------------KFGTILASCSYDGKVLI   83 (379)
T ss_dssp             ---------------------------------------------------------------GGCSEEEEEETTSCEEE
T ss_pred             ---------------------------------------------------------------CCCCEEEEeccCCEEEE
Confidence                                                                           12556777777788888


Q ss_pred             EECCCce--eeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEecccCccEEEEEEcC------
Q psy9182         259 WDRVSLQ--CIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHHCEAVLHLRFSN------  324 (486)
Q Consensus       259 ~d~~~~~--~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~~~------  324 (486)
                      ||+.+++  .+..+..|...|.+++|  +  +.++++++.||.|++||++++.  ....+..|...|.++.|++      
T Consensus        84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~  163 (379)
T 3jrp_A           84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED  163 (379)
T ss_dssp             EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred             EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence            8877776  66777889999999999  4  7899999999999999998873  4456678899999999986      


Q ss_pred             ---------CeEEEEeCCCcEEEEECCCCCce-eeEEeeecCcccEEEEEe--C---CCEEEEEeCCCcEEEEECCCce-
Q psy9182         325 ---------GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF--D---EKYIVSASGDRTIKVWNTSSCE-  388 (486)
Q Consensus       325 ---------~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~--~---~~~l~~~~~d~~i~iwd~~~~~-  388 (486)
                               ..+++++.||.|++||++.+... .....+.+|...|.++.|  +   +++|++++.||.|++||++++. 
T Consensus       164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~  243 (379)
T 3jrp_A          164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG  243 (379)
T ss_dssp             ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred             ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence                     48999999999999999876543 344567789999999999  5   7899999999999999998864 


Q ss_pred             --EEEE--EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCC
Q psy9182         389 --FVRT--LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       389 --~~~~--~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                        ....  ...|...+.++.|  ++++|++++.||.|++|++..+
T Consensus       244 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          244 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             CCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             cceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence              2222  2348889999988  4889999999999999999754

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=8e-31  Score=256.71  Aligned_cols=225  Identities=13%  Similarity=0.130  Sum_probs=179.4

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCceee----EEEcCCcccEEEEEec--------CCEEEEEeCCCcEEEEECCCCcE--
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQCI----KVLTGHTGSVLCLQYD--------ERVIISGSSDSTVRVWDVNTGEM--  306 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~~--------~~~l~~~~~dg~i~vwd~~~~~~--  306 (486)
                      +++++.+++++.|++|+|||+.+++..    ..+..|.+.|.+++|.        +.+|++++.||+|++||+.++..  
T Consensus       170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~  249 (524)
T 2j04_B          170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV  249 (524)
T ss_dssp             ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred             chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence            467788999999999999998776542    3456778899999993        36999999999999999987642  


Q ss_pred             ---------EEEecccCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEE--Ee--CC-CEEE
Q psy9182         307 ---------VNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVV--DF--DE-KYIV  371 (486)
Q Consensus       307 ---------~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~--~~--~~-~~l~  371 (486)
                               ...+..|...|.+++|++ +.|++|+.||.|++||++++...  ...+.+|...|.++  .+  ++ .+|+
T Consensus       250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~--~~~~~~H~~~V~sv~~~~s~~g~~~la  327 (524)
T 2j04_B          250 HVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVP--SFYDQVHDSYILSVSTAYSDFEDTVVS  327 (524)
T ss_dssp             SEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSC--SEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred             ccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCc--eEEeecccccEEEEEEEcCCCCCeEEE
Confidence                     236678889999999975 59999999999999999876432  24467899999999  44  45 7999


Q ss_pred             EEeCCCcEEEEECCCceEEEEEcCCcc--cEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182         372 SASGDRTIKVWNTSSCEFVRTLNGHKR--GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--  445 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--  445 (486)
                      +++.|++|++||+++++++..+.+|..  .|.+++|  ++..+++++.|++|++||++++.++..+.+|.+.|++|+|  
T Consensus       328 S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp  407 (524)
T 2j04_B          328 TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR  407 (524)
T ss_dssp             EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred             EeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence            999999999999999888777777653  4666666  4778999999999999999999998899999999999999  


Q ss_pred             cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         446 DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++.+|++|+.||+|++||+...
T Consensus       408 ~g~~l~Sgs~Dgtv~lwd~~~~  429 (524)
T 2j04_B          408 LHPMVLAGSADGSLIITNAARR  429 (524)
T ss_dssp             SCCBCEEEETTTEEECCBSCSS
T ss_pred             CCCeEEEEECCCEEEEEechHh
Confidence            8889999999999999998654

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.97  E-value=3.6e-30  Score=246.55  Aligned_cols=270  Identities=22%  Similarity=0.306  Sum_probs=207.0

Q ss_pred             cccCCccCcceE-EEeecCceeeecccccc----cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         108 ISLLPNFDEKYI-VSASGDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       108 ~~~~~s~~~~~l-~tg~~dg~v~iWd~~~~----~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ..+.++|+...+ ++|+.||.|+|||+...    +.+..+.+|...|.+++|++.                         
T Consensus        38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-------------------------   92 (402)
T 2aq5_A           38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPH-------------------------   92 (402)
T ss_dssp             CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTT-------------------------
T ss_pred             CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCC-------------------------
Confidence            345566666544 45788999999998653    345567889999999888520                         


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                  ++++|++|+.||.|++||+.
T Consensus        93 ------------------------------------------------------------~~~~l~s~s~dg~v~vw~~~  112 (402)
T 2aq5_A           93 ------------------------------------------------------------NDNVIASGSEDCTVMVWEIP  112 (402)
T ss_dssp             ------------------------------------------------------------CTTEEEEEETTSEEEEEECC
T ss_pred             ------------------------------------------------------------CCCEEEEEeCCCeEEEEEcc
Confidence                                                                        34455666666666666665


Q ss_pred             Cc-------eeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEe--cccCccEEEEEEcCC--eEE
Q psy9182         263 SL-------QCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNG--MMV  328 (486)
Q Consensus       263 ~~-------~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~--~l~  328 (486)
                      ++       +.+..+.+|...|.+++|  ++ +++++++.||.|++||+++++.+..+  ..|...|.+++|+++  .++
T Consensus       113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  192 (402)
T 2aq5_A          113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC  192 (402)
T ss_dssp             TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred             CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence            55       567788899999999999  44 69999999999999999999999999  789999999999854  899


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEee-ecCccc-EEEEEe--CCCEEEEE---eCCCcEEEEECCCceE-EEEEc-CCccc
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRVL-VGHRAA-VNVVDF--DEKYIVSA---SGDRTIKVWNTSSCEF-VRTLN-GHKRG  399 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~-v~~~~~--~~~~l~~~---~~d~~i~iwd~~~~~~-~~~~~-~~~~~  399 (486)
                      +++.||.|++||+++++..   ..+ ..|... +..+.|  ++.++++|   +.|+.|++||+++++. +.... .|...
T Consensus       193 ~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  269 (402)
T 2aq5_A          193 TSCRDKRVRVIEPRKGTVV---AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG  269 (402)
T ss_dssp             EEETTSEEEEEETTTTEEE---EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS
T ss_pred             EEecCCcEEEEeCCCCcee---eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc
Confidence            9999999999999987654   333 456554 677777  77888888   7899999999998664 33333 46677


Q ss_pred             EEEEEeC--CCEEE-EEeCCCcEEEEECCCCee-eEEecC--cccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         400 IACLQYR--DRLVV-SGSSDNTIRLWDIECGAC-LRVLEG--HEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       400 v~~~~~~--~~~l~-~~~~dg~v~iwd~~~~~~-~~~~~~--h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +.++.++  +++|+ +|+.||.|++||+.+++. +..+..  |...|.+++|  ++.+++  +.|+.+++|++.++
T Consensus       270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~~  343 (402)
T 2aq5_A          270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV--NKCEIARFYKLHER  343 (402)
T ss_dssp             CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG--GGTEEEEEEEEETT
T ss_pred             eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccce--ecceeEEEEEcCCC
Confidence            8888774  77776 555799999999998874 444444  4589999999  555555  46779999999864

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.2e-29  Score=242.02  Aligned_cols=325  Identities=13%  Similarity=0.103  Sum_probs=223.6

Q ss_pred             ccccccCCccCcceEEEeecCceeeeccccccc---ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~---~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      ..+.++.++++|++|+++ .++.|++||+.+|+   .+..+..+........+...            -.+...+.....
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~   71 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTA------------KEQQGQSSENEN   71 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccc------------hhhccccccccc
Confidence            457788899999966665 57899999999999   77777766542222222100            001111111111


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCc--cceEEEEeCCCEE-EEEecCCeEEE
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS--KGVYCLQYDDHKI-VSGLRDNTIKV  258 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l-~~~~~dg~i~i  258 (486)
                      +..-+--.  ...  ....              ..+    ...........+.  ...+++++++++| ++|+.||.|++
T Consensus        72 ~~~~~~~~--~~~--~~~~--------------~~~----~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~i  129 (450)
T 2vdu_B           72 ENKKLKSN--KGD--SIKR--------------TAA----KVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLV  129 (450)
T ss_dssp             --------------------------------------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred             cccccccC--cCc--cccc--------------cCc----cccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEE
Confidence            11100000  000  0000              000    0000000111223  3344566788886 88999999999


Q ss_pred             EECC--CceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE----EecccCccEEEEEEcCC---
Q psy9182         259 WDRV--SLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN----TLIHHCEAVLHLRFSNG---  325 (486)
Q Consensus       259 ~d~~--~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~i~~~~~~~~---  325 (486)
                      ||+.  +++.+..+.  .|...|.+++|  ++++|++|+.+|.|++|++.+++...    .+..|...|.+++|+++   
T Consensus       130 wd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~  209 (450)
T 2vdu_B          130 FDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDG  209 (450)
T ss_dssp             EEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTS
T ss_pred             EECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCC
Confidence            9999  888888876  56788999999  78899999999999999998876543    67788999999999875   


Q ss_pred             --eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCC------
Q psy9182         326 --MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH------  396 (486)
Q Consensus       326 --~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------  396 (486)
                        ++++++.|+.|++||+.+++...  ....+|...|.++.| ++++|++++.|+.|++||+.+++++..+..+      
T Consensus       210 ~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~  287 (450)
T 2vdu_B          210 HQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPY  287 (450)
T ss_dssp             CEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGG
T ss_pred             CcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhh
Confidence              89999999999999998876543  335689999999999 7999999999999999999999988888632      


Q ss_pred             -------------------cccEEEEEeC--CCEEEEEe-CCCcEEEEEC--CCC---eeeEEecCcccCeEEEEecCC-
Q psy9182         397 -------------------KRGIACLQYR--DRLVVSGS-SDNTIRLWDI--ECG---ACLRVLEGHEELVRCIRFDAK-  448 (486)
Q Consensus       397 -------------------~~~v~~~~~~--~~~l~~~~-~dg~v~iwd~--~~~---~~~~~~~~h~~~v~~~~~~~~-  448 (486)
                                         ...+..+.+.  +++|++++ .|+.|++|++  .++   +.+..+..| ..|.+++|++. 
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~  366 (450)
T 2vdu_B          288 LNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE  366 (450)
T ss_dssp             CCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred             hhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc
Confidence                               3457777774  88999998 8999999999  666   777888888 88999999444 


Q ss_pred             EEEEEeC-------CCcEEEEeCCCC
Q psy9182         449 RIVSGAY-------DGKIKVWNLVAA  467 (486)
Q Consensus       449 ~l~s~~~-------dg~v~iwdl~~~  467 (486)
                      .+++.+.       +..|.+|.+...
T Consensus       367 ~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          367 FQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             EEEEEecccCCCCCCcceEEEEEEcC
Confidence            4444433       456899987643

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.97  E-value=8e-29  Score=234.43  Aligned_cols=233  Identities=15%  Similarity=0.212  Sum_probs=204.2

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN  308 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~  308 (486)
                      .....++++++++++++++.||.|++||+.+++  .+..+.+|...|.+++|  +++++++++.||.|++||+++++...
T Consensus         9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~   88 (372)
T 1k8k_C            9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP   88 (372)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence            445556777899999999999999999999987  88899999999999999  68999999999999999999887554


Q ss_pred             Ee--cccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeE-EeeecCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182         309 TL--IHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLR-RVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV  381 (486)
Q Consensus       309 ~~--~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i  381 (486)
                      .+  ..|...+.++.|+++  .+++++.|+.|++||++........ ....+|...|.++.|  +++++++++.|+.|++
T Consensus        89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~  168 (372)
T 1k8k_C           89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI  168 (372)
T ss_dssp             EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence            43  668889999999864  8999999999999999987753332 333578899999999  7889999999999999


Q ss_pred             EEC------------------CCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         382 WNT------------------SSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       382 wd~------------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      ||+                  ..++.+..+..|...+.++.+  ++++|++++.||.|++||+++++++..+..|..+|.
T Consensus       169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~  248 (372)
T 1k8k_C          169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL  248 (372)
T ss_dssp             EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred             EEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeE
Confidence            995                  467889999999999999999  478999999999999999999999999999999999


Q ss_pred             EEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         442 CIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       442 ~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      +++|  ++.+|+++ .||.|++|++..
T Consensus       249 ~~~~~~~~~~l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          249 AVTFITESSLVAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             EEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred             EEEEecCCCEEEEE-eCCeEEEEEccC
Confidence            9999  66666666 899999999987

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=1.9e-29  Score=240.26  Aligned_cols=228  Identities=13%  Similarity=0.109  Sum_probs=171.1

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeE-----EEcCCcccEEEEEe----------cCCEEEEEeCCCcEEEEEC
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK-----VLTGHTGSVLCLQY----------DERVIISGSSDSTVRVWDV  301 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~----------~~~~l~~~~~dg~i~vwd~  301 (486)
                      ..++.+++.++++++.|++|++||..+++...     .+.+|.+.|.+++|          |+++|++|+.|++|++||+
T Consensus        94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~  173 (393)
T 4gq1_A           94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL  173 (393)
T ss_dssp             ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred             eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence            34456677889999999999999998876543     35689999999998          5689999999999999999


Q ss_pred             CCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeE----------------------EeeecC
Q psy9182         302 NTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLR----------------------RVLVGH  356 (486)
Q Consensus       302 ~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~----------------------~~~~~~  356 (486)
                      +++..+..+..|...+.+++|+|+   ++++++.|+.|++||+++++.....                      ....+|
T Consensus       174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  253 (393)
T 4gq1_A          174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI  253 (393)
T ss_dssp             ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred             CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence            999888888889999999999874   7999999999999999876543211                      112356


Q ss_pred             cccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEE-------------------e---CCCEEE
Q psy9182         357 RAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-------------------Y---RDRLVV  411 (486)
Q Consensus       357 ~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~-------------------~---~~~~l~  411 (486)
                      ...+.++.|   +++.+++++.|+++++||+..++....+..|...+..+.                   +   ++.+++
T Consensus       254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (393)
T 4gq1_A          254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT  333 (393)
T ss_dssp             SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred             cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence            677777776   789999999999999999998877776665554433221                   1   234677


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +|+.||.|++||+.+++++..+.+|..+|.+++|  ||++||+++.|| +.+|.+.
T Consensus       334 sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          334 AHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             EETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             EECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            8889999999999999999988899999999999  999999999766 6677654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=5.2e-29  Score=223.51  Aligned_cols=260  Identities=15%  Similarity=0.192  Sum_probs=185.2

Q ss_pred             eEEEeecCceeeecccccc---cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182         118 YIVSASGDRTIKVWNTSSC---EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       118 ~l~tg~~dg~v~iWd~~~~---~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      .+++++. ..|++|+..++   ++++++..|..+|..+.+.+.               ...|+...      +=+     
T Consensus        56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------------~~~~~~~~------~~~-----  108 (356)
T 2w18_A           56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPD---------------VYNLVCVA------LGN-----  108 (356)
T ss_dssp             EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTT---------------CCSCEEEE------ECS-----
T ss_pred             EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCc---------------ccceeeee------ecc-----
Confidence            5777766 49999999998   899999999999999998642               11111110      000     


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC----CCEEEEEecCCeEEEEECCCceeeEEE
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD----DHKIVSGLRDNTIKVWDRVSLQCIKVL  270 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~l~~~~~dg~i~i~d~~~~~~~~~~  270 (486)
                                                         ........++++++    ++.+++++.+  +.+|++.        
T Consensus       109 -----------------------------------~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~--------  143 (356)
T 2w18_A          109 -----------------------------------LEIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLT--------  143 (356)
T ss_dssp             -----------------------------------SSEEEEEEECC------CCEEEEEEEEE--EEEEEET--------
T ss_pred             -----------------------------------ccccceEEEEECCCccccccEEEeCCCe--EEEEecC--------
Confidence                                               00122234456677    7778877644  6667532        


Q ss_pred             cCCcccEEEEEecCCEEEEEe--CCCcEEEEEC-CCCcEEEEecccCccEEEEEEcC-----CeEEEEeCCCcEEEEECC
Q psy9182         271 TGHTGSVLCLQYDERVIISGS--SDSTVRVWDV-NTGEMVNTLIHHCEAVLHLRFSN-----GMMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       271 ~~~~~~v~~~~~~~~~l~~~~--~dg~i~vwd~-~~~~~~~~~~~~~~~i~~~~~~~-----~~l~~~~~dg~i~i~d~~  342 (486)
                                  +++++.+++  .|+.|++|++ .+++.+..+..|...+..++|++     ..+++++.|++|++||+.
T Consensus       144 ------------~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~  211 (356)
T 2w18_A          144 ------------KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK  211 (356)
T ss_dssp             ------------TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred             ------------CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence                        233444432  5889999999 45788777777777776666654     589999999999999999


Q ss_pred             CCCceeeEEeeecC---cccEEEEEe--CCCEE------------EEEeCCCcEEEEECCCceEEEEE-----cCCcccE
Q psy9182         343 SPNEITLRRVLVGH---RAAVNVVDF--DEKYI------------VSASGDRTIKVWNTSSCEFVRTL-----NGHKRGI  400 (486)
Q Consensus       343 ~~~~~~~~~~~~~~---~~~v~~~~~--~~~~l------------~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v  400 (486)
                      +++.+..   +.+|   ...+.+++|  ++.++            ++|+.|++|++||..+++.+..+     .+|...+
T Consensus       212 TGk~l~t---L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~  288 (356)
T 2w18_A          212 TGQLLKK---MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRF  288 (356)
T ss_dssp             TCCEEEE---EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCE
T ss_pred             CCcEEEE---EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCccee
Confidence            9876543   3333   234554444  66655            67888999999999999988766     4777666


Q ss_pred             EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE-EEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         401 ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       401 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      .+..+++.++++|+.|++|+|||+.+++++.++.+|...+. +++|  ||++|++|+.|++|+|||+
T Consensus       289 lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          289 LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            66677789999999999999999999999999999987655 5889  8999999999999999996

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.3e-29  Score=235.46  Aligned_cols=268  Identities=10%  Similarity=0.107  Sum_probs=207.2

Q ss_pred             cccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCccee
Q psy9182         108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILI  187 (486)
Q Consensus       108 ~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~v  187 (486)
                      ....+.+++.+|++|+.||+|++||+.+++.+..+.  ...|.++.+++               +   +++++.|++|++
T Consensus        40 ~~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~---------------~---~~s~s~D~~i~~   99 (343)
T 3lrv_A           40 LNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP---------------A---IISRGPCNRLLL   99 (343)
T ss_dssp             ECSSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC---------------S---EEEECSTTEEEE
T ss_pred             hhhhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC---------------c---eEEecCCCeEEE
Confidence            344556789999999999999999999999888876  44666666653               2   888889999999


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceee
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCI  267 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  267 (486)
                      |+.                                                              ++.+.+||..+++.+
T Consensus       100 w~~--------------------------------------------------------------~~~~~~~~~~~~~~~  117 (343)
T 3lrv_A          100 LYP--------------------------------------------------------------GNQITILDSKTNKVL  117 (343)
T ss_dssp             EET--------------------------------------------------------------TTEEEEEETTTCCEE
T ss_pred             EEc--------------------------------------------------------------cCceEEeecCCccee
Confidence            985                                                              235778898888866


Q ss_pred             EEEc-CCcccEEEEEe----cCCEEEEEeCCCcEEEEECCCCcEEEEec-ccCccEEEEEEcCC--eEEEEeCCCcEEEE
Q psy9182         268 KVLT-GHTGSVLCLQY----DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLRFSNG--MMVTCSKDRSIAVW  339 (486)
Q Consensus       268 ~~~~-~~~~~v~~~~~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~dg~i~i~  339 (486)
                      ..+. +|...|.++++    +++++++++.||.|++||+++++...... .+...+.+++|+++  ++++|+.||.|++|
T Consensus       118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw  197 (343)
T 3lrv_A          118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY  197 (343)
T ss_dssp             EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred             EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence            6665 67788999988    56899999999999999999999877663 34557999999865  88999999999999


Q ss_pred             ECCCCCceeeEEeeec-CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC---CcccE--EEEEe--CCCE
Q psy9182         340 DMVSPNEITLRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGI--ACLQY--RDRL  409 (486)
Q Consensus       340 d~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v--~~~~~--~~~~  409 (486)
                      |+++++...  ..+.. |...|.++.|  ++.+|++++ ++.|++||+++++.+..+..   |...+  .+++|  ++++
T Consensus       198 d~~~~~~~~--~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  274 (343)
T 3lrv_A          198 NLSSPDQAS--SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN  274 (343)
T ss_dssp             ESSCTTSCC--EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred             ECCCCCCCc--cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence            999887541  23344 8999999999  788999999 45999999999877655443   33333  24666  4899


Q ss_pred             EEEEeC-CCcEEEEECCCCeeeEEecCcccCeEEEEe-----cCCEEEEEeCCCcEEEEeC
Q psy9182         410 VVSGSS-DNTIRLWDIECGACLRVLEGHEELVRCIRF-----DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       410 l~~~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-----~~~~l~s~~~dg~v~iwdl  464 (486)
                      |++++. |+.|++|++.++......    .++..+.|     +...+++++.||.+.++-.
T Consensus       275 l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          275 MIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             EEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             EEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence            999998 999999999765443333    44556666     3467888888888888754

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.97  E-value=6.6e-29  Score=239.06  Aligned_cols=248  Identities=22%  Similarity=0.363  Sum_probs=195.8

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...|.+++|+|+|++||+|+.||.|+|||+.+++.++.+.+|...+.++++                           
T Consensus       145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~---------------------------  197 (420)
T 4gga_A          145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW---------------------------  197 (420)
T ss_dssp             STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---------------------------
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee---------------------------
Confidence            45567999999999999999999999999999999999999998887776655                           


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                   ++..+++|+.|+.+++||.
T Consensus       198 -------------------------------------------------------------~~~~l~sgs~d~~i~~~d~  216 (420)
T 4gga_A          198 -------------------------------------------------------------NSYILSSGSRSGHIHHHDV  216 (420)
T ss_dssp             -------------------------------------------------------------ETTEEEEEETTSEEEEEET
T ss_pred             -------------------------------------------------------------CCCEEEEEeCCCceeEeee
Confidence                                                                         3445677777778888876


Q ss_pred             CC-ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc----EEEEecccCccEEEEEEcCC---eEEE--
Q psy9182         262 VS-LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE----MVNTLIHHCEAVLHLRFSNG---MMVT--  329 (486)
Q Consensus       262 ~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~i~~~~~~~~---~l~~--  329 (486)
                      .. ...+..+.+|...+.++.+  +++++++++.||.+++||..+++    .+.....|...|.+++|++.   .+++  
T Consensus       217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~  296 (420)
T 4gga_A          217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG  296 (420)
T ss_dssp             TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE
T ss_pred             cccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe
Confidence            65 3445677889999998888  78999999999999999998765    34566788899999999863   5555  


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      |+.|+.|++||+.+++...   .... ...+.++.+  +++.+++++  .|+.|++||+.+++++..+.+|...|.+++|
T Consensus       297 gs~D~~I~iwd~~t~~~~~---~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~  372 (420)
T 4gga_A          297 GTSDRHIRIWNVCSGACLS---AVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM  372 (420)
T ss_dssp             CTTTCEEEEEETTTTEEEE---EEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred             ecCCCEEEEEeCCccccce---eecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence            3579999999999886543   2333 345666666  777777765  6899999999999999999999999999998


Q ss_pred             C--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         406 R--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       406 ~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      +  +.+|++|+.|++|+|||+....+....+.+...+.
T Consensus       373 spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~  410 (420)
T 4gga_A          373 SPDGATVASAAADETLRLWRCFELDPARRREREKASAA  410 (420)
T ss_dssp             CTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred             cCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence            4  88999999999999999987776666665554443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.97  E-value=5.2e-28  Score=231.34  Aligned_cols=229  Identities=19%  Similarity=0.349  Sum_probs=204.6

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      .+.++++++..+++++.||.|++||..+++....+.. |...|.+++|  ++++|++|+.||.|++||+.+++.+..+..
T Consensus        95 ~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  174 (401)
T 4aez_A           95 YLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG  174 (401)
T ss_dssp             TCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             eEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence            4556777788899999999999999999998887776 7889999999  788999999999999999999999999999


Q ss_pred             cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       313 ~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      |...|.++.|+++.+++++.||.|++||++....  ....+.+|...|.++.|  +++++++++.|+.|++||+++++.+
T Consensus       175 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~  252 (401)
T 4aez_A          175 HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK  252 (401)
T ss_dssp             CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred             CCCceEEEEECCCEEEEEcCCCCEEEEecccCcc--eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence            9999999999999999999999999999985443  23556789999999999  7889999999999999999999999


Q ss_pred             EEEcCCcccEEEEEeC---CCEEEEEe--CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEe--CCCcEEE
Q psy9182         391 RTLNGHKRGIACLQYR---DRLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGA--YDGKIKV  461 (486)
Q Consensus       391 ~~~~~~~~~v~~~~~~---~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~--~dg~v~i  461 (486)
                      ..+..|...|.++.++   ..++++++  .|+.|++||+.+++.+..+. +...|.+++|  ++.+|++++  .||.|++
T Consensus       253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v  331 (401)
T 4aez_A          253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSI  331 (401)
T ss_dssp             EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEE
T ss_pred             EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEE
Confidence            9999999999999995   36777765  79999999999999998886 5678999999  888898854  8999999


Q ss_pred             EeCCCC
Q psy9182         462 WNLVAA  467 (486)
Q Consensus       462 wdl~~~  467 (486)
                      ||+.++
T Consensus       332 ~~~~~~  337 (401)
T 4aez_A          332 WSYSSS  337 (401)
T ss_dssp             EEEETT
T ss_pred             EecCCc
Confidence            999864

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.97  E-value=3.3e-30  Score=244.62  Aligned_cols=231  Identities=13%  Similarity=0.178  Sum_probs=191.0

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCc--eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc---
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL--QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE---  305 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---  305 (486)
                      .....+++++++++|++|+.||.|++||+.++  +.+..+.+|...|.+++|  ++++|++++.||.|++||+.+++   
T Consensus        12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~   91 (377)
T 3dwl_C           12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK   91 (377)
T ss_dssp             SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred             CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence            44556778889999999999999999999988  788889999999999999  67899999999999999999877   


Q ss_pred             EEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeec-CcccEEEEEe--CCCEEEEEeCCCcEE
Q psy9182         306 MVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIK  380 (486)
Q Consensus       306 ~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~  380 (486)
                      ....+..|...|.+++|+++  .+++++.|+.|++||++.++.......+.. |...|.++.|  ++++|++++.|+.|+
T Consensus        92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~  171 (377)
T 3dwl_C           92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY  171 (377)
T ss_dssp             CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred             eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence            67778889999999999864  899999999999999998764333355556 9999999999  788999999999999


Q ss_pred             EEECC------------------CceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee----eEEecCc
Q psy9182         381 VWNTS------------------SCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC----LRVLEGH  436 (486)
Q Consensus       381 iwd~~------------------~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~h  436 (486)
                      +||+.                  .++++..+ +|...|.++.|+  +++|++++.||.|++||+.+++.    +..+.+|
T Consensus       172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  250 (377)
T 3dwl_C          172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS  250 (377)
T ss_dssp             EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred             EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence            99985                  35566677 899999999984  78999999999999999999887    7888999


Q ss_pred             ccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         437 EELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       437 ~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ...|.+++|  ++++|++++.|+.+ +|+..
T Consensus       251 ~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~  280 (377)
T 3dwl_C          251 QLPLRSLLWANESAIVAAGYNYSPI-LLQGN  280 (377)
T ss_dssp             SSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred             CCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence            999999999  88888888766555 77765

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.97  E-value=1.1e-28  Score=232.15  Aligned_cols=247  Identities=19%  Similarity=0.299  Sum_probs=202.5

Q ss_pred             cccccccccCCccC---cceEEEeecCceeeeccccccc-ceeeecCcccceeEEEeecceeEecCCCCceeccCcceee
Q psy9182         102 MLQRDFISLLPNFD---EKYIVSASGDRTIKVWNTSSCE-FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV  177 (486)
Q Consensus       102 ~~~~~~~~~~~s~~---~~~l~tg~~dg~v~iWd~~~~~-~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~  177 (486)
                      .|...+.++.++|+   +.+|++|+.||.|++||+.+++ .+..+.+|...|.++.|.+.                    
T Consensus        63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------  122 (357)
T 3i2n_A           63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG--------------------  122 (357)
T ss_dssp             EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG--------------------
T ss_pred             cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc--------------------
Confidence            46678999999998   6999999999999999999988 89999999999999988421                    


Q ss_pred             cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       178 s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                                                                                  .++++++++|++++.||.|+
T Consensus       123 ------------------------------------------------------------~~~s~~~~~l~~~~~d~~i~  142 (357)
T 3i2n_A          123 ------------------------------------------------------------LGIGEGAPEIVTGSRDGTVK  142 (357)
T ss_dssp             ------------------------------------------------------------GGCC-CCCEEEEEETTSCEE
T ss_pred             ------------------------------------------------------------cccCCCccEEEEEeCCCeEE
Confidence                                                                        01245677888888899999


Q ss_pred             EEECCCce-eeEEEcCCcc----cEEEEE----e--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--
Q psy9182         258 VWDRVSLQ-CIKVLTGHTG----SVLCLQ----Y--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--  324 (486)
Q Consensus       258 i~d~~~~~-~~~~~~~~~~----~v~~~~----~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--  324 (486)
                      +||+.+++ .+..+..|.+    .+.++.    +  +++++++++.||.|++||+++++.... ..+...+.++.|++  
T Consensus       143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~  221 (357)
T 3i2n_A          143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKD  221 (357)
T ss_dssp             EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSS
T ss_pred             EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCC
Confidence            99988876 6777766554    788887    3  789999999999999999999887544 56788999999986  


Q ss_pred             ---CeEEEEeCCCcEEEEECCCCCceeeEE--eeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEECCCc---------
Q psy9182         325 ---GMMVTCSKDRSIAVWDMVSPNEITLRR--VLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWNTSSC---------  387 (486)
Q Consensus       325 ---~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~~---------  387 (486)
                         +.+++++.||.|++||+++++......  ...+|...|.++.|  +++ ++++++.||.|++||++++         
T Consensus       222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  301 (357)
T 3i2n_A          222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE  301 (357)
T ss_dssp             SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred             CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence               489999999999999998765443222  34589999999999  555 8999999999999998753         


Q ss_pred             ----------eEEEEEcCCcccEEEEEeC--CCEEE-EEeCCCcEEEEECCCCee
Q psy9182         388 ----------EFVRTLNGHKRGIACLQYR--DRLVV-SGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       388 ----------~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~~~~  429 (486)
                                +.+..+.+|...|.++.|+  +++|+ +++.||.|++||+.+.+.
T Consensus       302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~  356 (357)
T 3i2n_A          302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK  356 (357)
T ss_dssp             SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred             CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence                      4677888999999999995  66777 899999999999987654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.1e-27  Score=221.53  Aligned_cols=235  Identities=19%  Similarity=0.342  Sum_probs=204.2

Q ss_pred             CCccce--EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE
Q psy9182         232 ENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV  307 (486)
Q Consensus       232 ~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~  307 (486)
                      +|...+  +++++++++|++++.||.|++||+.+++.+..+.+|...|.+++|  ++++|++++.||.|++||+.+++.+
T Consensus        30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  109 (369)
T 3zwl_B           30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCV  109 (369)
T ss_dssp             CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred             EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence            344444  455668999999999999999999999999999999999999999  6889999999999999999999998


Q ss_pred             EEecccCccEEEEEEcCC--eEEEEeCC-----CcEEEEECCCCCceeeE--------EeeecCcc--cEEEEEe--CCC
Q psy9182         308 NTLIHHCEAVLHLRFSNG--MMVTCSKD-----RSIAVWDMVSPNEITLR--------RVLVGHRA--AVNVVDF--DEK  368 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~--~l~~~~~d-----g~i~i~d~~~~~~~~~~--------~~~~~~~~--~v~~~~~--~~~  368 (486)
                      ..+. +...+.++.|+++  .+++++.+     +.|++||+.........        .....+..  .+.++.+  +++
T Consensus       110 ~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (369)
T 3zwl_B          110 ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK  188 (369)
T ss_dssp             EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred             EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence            8887 7889999999864  88899988     99999999876532111        22334444  7888888  788


Q ss_pred             EEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         369 YIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      ++++++.||.|++||+++ ++.+..+..|...|.++.+  ++++|++++.||.|++||+++++.+..+. +...+.+++|
T Consensus       189 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~  267 (369)
T 3zwl_B          189 YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVI  267 (369)
T ss_dssp             EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEe
Confidence            999999999999999999 7889999999999999999  48899999999999999999999998887 7788999999


Q ss_pred             --cCCEEEEEeCCC--------------cEEEEeCCCCC
Q psy9182         446 --DAKRIVSGAYDG--------------KIKVWNLVAAL  468 (486)
Q Consensus       446 --~~~~l~s~~~dg--------------~v~iwdl~~~~  468 (486)
                        ++.++++++.++              .+++||+.++.
T Consensus       268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  306 (369)
T 3zwl_B          268 TPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE  306 (369)
T ss_dssp             CSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred             cCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence              889999999988              89999988654

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.97  E-value=4.8e-28  Score=230.19  Aligned_cols=216  Identities=13%  Similarity=0.175  Sum_probs=174.9

Q ss_pred             CEEEEEecCCeEEEEECCCceeeEEEc--CCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEeccc---Ccc
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHH---CEA  316 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~  316 (486)
                      ++|++|+.||.|++||+.+++....+.  +|...|.+++|   +++++++++.||.|++||+++ ..+..+..+   ...
T Consensus        87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~  165 (383)
T 3ei3_B           87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYW  165 (383)
T ss_dssp             TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCC
T ss_pred             CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCC
Confidence            567788888888888888777666665  69999999999   458999999999999999986 555555443   478


Q ss_pred             EEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEECCC----c
Q psy9182         317 VLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWNTSS----C  387 (486)
Q Consensus       317 i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd~~~----~  387 (486)
                      +.+++|+++  .+++++.|+.|++||++ ++.   ...+.+|...|.++.|  +++ ++++++.|+.|++||+++    +
T Consensus       166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~---~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~  241 (383)
T 3ei3_B          166 YCCVDVSVSRQMLATGDSTGRLLLLGLD-GHE---IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN  241 (383)
T ss_dssp             EEEEEEETTTTEEEEEETTSEEEEEETT-SCE---EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT
T ss_pred             eEEEEECCCCCEEEEECCCCCEEEEECC-CCE---EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc
Confidence            999999864  99999999999999994 332   3556789999999999  566 999999999999999987    6


Q ss_pred             eEEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc-----------------cCeEEEEe--
Q psy9182         388 EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE-----------------ELVRCIRF--  445 (486)
Q Consensus       388 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-----------------~~v~~~~~--  445 (486)
                      ..+..+ +|...|.++.|+   +.+|++++.|+.|++||+++++.+..+.+|.                 ..+..++|  
T Consensus       242 ~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~  320 (383)
T 3ei3_B          242 SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP  320 (383)
T ss_dssp             CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC
T ss_pred             ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC
Confidence            666666 699999999984   5899999999999999999988777766543                 23334555  


Q ss_pred             cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         446 DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++++  +++.||.|++||+.++.
T Consensus       321 dg~~--s~s~d~~i~iwd~~~~~  341 (383)
T 3ei3_B          321 DDQL--LLNDKRTIDIYDANSGG  341 (383)
T ss_dssp             CTTT--CTTCCCCEEEEETTTCC
T ss_pred             Cccc--ccCCCCeEEEEecCCCc
Confidence            5555  77899999999998654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.1e-28  Score=254.38  Aligned_cols=226  Identities=20%  Similarity=0.357  Sum_probs=193.2

Q ss_pred             eCCCEEEEEecCCeEEEEECC--CceeeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEeccc
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRV--SLQCIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHH  313 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~  313 (486)
                      ++++++++|+.||.|++||+.  +++....+.+|.+.|.+++|  +  ++++++|+.||.|++||+.+++  .+..+..|
T Consensus        19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h   98 (753)
T 3jro_A           19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH   98 (753)
T ss_dssp             SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred             CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC
Confidence            456678888888888888876  56777888999999999998  3  8899999999999999999887  67778889


Q ss_pred             CccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC---------------CCEEEEEe
Q psy9182         314 CEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD---------------EKYIVSAS  374 (486)
Q Consensus       314 ~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~---------------~~~l~~~~  374 (486)
                      ...|.++.|++    +.+++|+.||.|++||++.+..... ....+|...|.++.+.               +.++++|+
T Consensus        99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~-~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs  177 (753)
T 3jro_A           99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG  177 (753)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC-EEEECCSSCEEEEEECCCC---------CGGGCCEEEEE
T ss_pred             CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce-eEeecCCCceEEEEecCcccccccccccCCCCCEEEEEE
Confidence            99999999985    3899999999999999988744322 3456789999999983               67999999


Q ss_pred             CCCcEEEEECCCc----eEEEEEcCCcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCCe-----eeEEecCcccCe
Q psy9182         375 GDRTIKVWNTSSC----EFVRTLNGHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGA-----CLRVLEGHEELV  440 (486)
Q Consensus       375 ~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~h~~~v  440 (486)
                      .||.|++||++++    .....+.+|...|.++.++     +.++++|+.||.|++||+.+++     .+.....|...|
T Consensus       178 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v  257 (753)
T 3jro_A          178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL  257 (753)
T ss_dssp             TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC
T ss_pred             CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce
Confidence            9999999999876    6677888999999999995     6789999999999999998864     333445688899


Q ss_pred             EEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         441 RCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       441 ~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++++|  ++++|++++.||.|++||+....
T Consensus       258 ~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~  287 (753)
T 3jro_A          258 WRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (753)
T ss_dssp             CCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred             EEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence            99999  88899999999999999998643

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.96  E-value=2.4e-28  Score=237.20  Aligned_cols=233  Identities=10%  Similarity=0.258  Sum_probs=189.4

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCce-----------eeEEEcCCc------------ccEEEEEe--cC--CE
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-----------CIKVLTGHT------------GSVLCLQY--DE--RV  286 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~------------~~v~~~~~--~~--~~  286 (486)
                      ....+++++++++|++|+.||.|++||+.+++           ....+.+|.            ..|.+++|  ++  ..
T Consensus        30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~  109 (447)
T 3dw8_B           30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ  109 (447)
T ss_dssp             SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred             cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence            33445667789999999999999999998877           578888998            88999999  44  68


Q ss_pred             EEEEeCCCcEEEEECCCCcEE---------------------------------------EE-ecccCccEEEEEEcCC-
Q psy9182         287 IISGSSDSTVRVWDVNTGEMV---------------------------------------NT-LIHHCEAVLHLRFSNG-  325 (486)
Q Consensus       287 l~~~~~dg~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~i~~~~~~~~-  325 (486)
                      +++++.||.|++||+.+++..                                       .. ...|...|.+++|+++ 
T Consensus       110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  189 (447)
T 3dw8_B          110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY  189 (447)
T ss_dssp             EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS
T ss_pred             EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC
Confidence            999999999999999764432                                       12 3578899999999864 


Q ss_pred             -eEEEEeCCCcEEEEECCCCCceeeEE-----eeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceE----EEE
Q psy9182         326 -MMVTCSKDRSIAVWDMVSPNEITLRR-----VLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEF----VRT  392 (486)
Q Consensus       326 -~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~----~~~  392 (486)
                       .+++| .|+.|++||++.........     .+.+|...|.++.|  ++ +++++++.||.|++||+++++.    +..
T Consensus       190 ~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  268 (447)
T 3dw8_B          190 ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKL  268 (447)
T ss_dssp             SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEE
T ss_pred             CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeE
Confidence             77787 89999999998433221110     25578899999999  55 8999999999999999999887    788


Q ss_pred             EcCCcc------------cEEEEEeC--CCEEEEEeCCCcEEEEECCC-CeeeEEecCcccC---------------eEE
Q psy9182         393 LNGHKR------------GIACLQYR--DRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEEL---------------VRC  442 (486)
Q Consensus       393 ~~~~~~------------~v~~~~~~--~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~h~~~---------------v~~  442 (486)
                      +..|..            .|.++.|+  +++|++++. +.|++||+++ ++++..+.+|...               +..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~  347 (447)
T 3dw8_B          269 FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFE  347 (447)
T ss_dssp             ECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCC
T ss_pred             eccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceE
Confidence            888876            89999995  789999998 9999999997 8888899888642               223


Q ss_pred             EEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         443 IRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       443 ~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++|  ++++|++|+.||.|++||+.++.
T Consensus       348 ~~~s~~~~~l~s~s~dg~v~iwd~~~~~  375 (447)
T 3dw8_B          348 CCWNGSDSVVMTGSYNNFFRMFDRNTKR  375 (447)
T ss_dssp             EEECTTSSEEEEECSTTEEEEEETTTCC
T ss_pred             EEECCCCCEEEEeccCCEEEEEEcCCCc
Confidence            778  88999999999999999998764

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.96  E-value=2.6e-26  Score=218.79  Aligned_cols=300  Identities=16%  Similarity=0.133  Sum_probs=227.9

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCccee-ecCCCCCcceeeeccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI-VSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l-~s~s~dg~i~vWd~~~~~  194 (486)
                      +.++++++.|+.|++||+.+++.+..+.+|. .+.+++|+               +++..+ ++++.|+.|++||+.++.
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s---------------~dg~~l~~~~~~d~~i~v~d~~~~~   65 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVIS---------------PDGTKVYVANAHSNDVSIIDTATNN   65 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEEC---------------TTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred             CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEEC---------------CCCCEEEEECCCCCeEEEEECCCCe
Confidence            3478889999999999999999999998886 48899997               466555 677789999999985533


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCC
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                      .                            ...+..  ......+++++++++++++ ..++.|++||+.+++.+..+..+
T Consensus        66 ~----------------------------~~~~~~--~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~  115 (391)
T 1l0q_A           66 V----------------------------IATVPA--GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG  115 (391)
T ss_dssp             E----------------------------EEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred             E----------------------------EEEEEC--CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC
Confidence            2                            112221  1244456677889887654 46799999999999998888755


Q ss_pred             cccEEEEEe--cCCEE-EEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCce
Q psy9182         274 TGSVLCLQY--DERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNEI  347 (486)
Q Consensus       274 ~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~~  347 (486)
                       ..+.++++  +++.+ ++++.++.|++||+.+++.+..+..+ ..+.++.|+++  .+ ++++.++.|++||+++++..
T Consensus       116 -~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~  193 (391)
T 1l0q_A          116 -KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI  193 (391)
T ss_dssp             -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             -CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence             46788888  67766 67888999999999999988888765 45688999864  45 67778899999999887544


Q ss_pred             eeEEeeecCcccEEEEEe--CCCEEEEEe---CCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE-EEEeCCCcE
Q psy9182         348 TLRRVLVGHRAAVNVVDF--DEKYIVSAS---GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV-VSGSSDNTI  419 (486)
Q Consensus       348 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~v  419 (486)
                      ..   . .+...+.++.+  +++++++++   .++.|++||+.+++.+..+..|.. +.++.++  ++++ ++++.|+.|
T Consensus       194 ~~---~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v  268 (391)
T 1l0q_A          194 DT---V-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTV  268 (391)
T ss_dssp             EE---E-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEE
T ss_pred             EE---E-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEE
Confidence            22   2 24556777777  788888887   689999999999999988887654 6677774  7766 677889999


Q ss_pred             EEEECCCCeeeEEecCcccCeE-----------------EEEecC----------CEEEEEeCCCcEEEEeCCCCC
Q psy9182         420 RLWDIECGACLRVLEGHEELVR-----------------CIRFDA----------KRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       420 ~iwd~~~~~~~~~~~~h~~~v~-----------------~~~~~~----------~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++||+.+++.+..+..|..+..                 ....+.          -.+...+.|..+++||+..+.
T Consensus       269 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~  344 (391)
T 1l0q_A          269 SVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS  344 (391)
T ss_dssp             EEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred             EEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence            9999999999988876654321                 111111          236666778999999997654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.96  E-value=2.9e-27  Score=218.65  Aligned_cols=235  Identities=22%  Similarity=0.372  Sum_probs=191.0

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...|.++.++|++++|++|+.||+|++||+.+++.+..+.+|...+.++.+                           
T Consensus        65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~---------------------------  117 (318)
T 4ggc_A           65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW---------------------------  117 (318)
T ss_dssp             STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---------------------------
T ss_pred             CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec---------------------------
Confidence            45667899999999999999999999999999999999888888776655443                           


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                   ++..+++++.++.+++|+.
T Consensus       118 -------------------------------------------------------------~~~~l~s~~~~~~~~~~~~  136 (318)
T 4ggc_A          118 -------------------------------------------------------------NSYILSSGSRSGHIHHHDV  136 (318)
T ss_dssp             -------------------------------------------------------------ETTEEEEEETTSEEEEEET
T ss_pred             -------------------------------------------------------------CCCEEEEEecCCceEeeec
Confidence                                                                         4456777888888888887


Q ss_pred             CCc-eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE----EEEecccCccEEEEEEcCC-----eEEE
Q psy9182         262 VSL-QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM----VNTLIHHCEAVLHLRFSNG-----MMVT  329 (486)
Q Consensus       262 ~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~i~~~~~~~~-----~l~~  329 (486)
                      ... ..+..+.+|...+.++.+  +++++++++.||.|++||+++++.    ......+...|.++.+.+.     .+++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~  216 (318)
T 4ggc_A          137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG  216 (318)
T ss_dssp             TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred             CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence            664 445677889999988888  789999999999999999987653    3445667788999998753     3346


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCcccEEEEEe
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY  405 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~  405 (486)
                      ++.++.|++||........    ...+...+..+.+  +++.+++++  .|+.|++||+++++++..+.+|...|++++|
T Consensus       217 ~~~~~~i~lwd~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~  292 (318)
T 4ggc_A          217 GTSDRHIRIWNVCSGACLS----AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTM  292 (318)
T ss_dssp             CTTTCEEEEEETTTCCEEE----EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred             cCCCCEEEEEecccccccc----cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence            6788999999998876542    2235556666666  667766654  7999999999999999999999999999999


Q ss_pred             C--CCEEEEEeCCCcEEEEECCCCe
Q psy9182         406 R--DRLVVSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       406 ~--~~~l~~~~~dg~v~iwd~~~~~  428 (486)
                      +  +++|++|+.||+|+|||+....
T Consensus       293 spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          293 SPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             CTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             cCCCCEEEEEecCCeEEEEECCCCC
Confidence            5  8899999999999999997653

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.96  E-value=3.3e-27  Score=220.66  Aligned_cols=232  Identities=13%  Similarity=0.113  Sum_probs=195.3

Q ss_pred             CCccce--EEEEeCCCEEEEEecCCeEEEEECCCce---eeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEEEC-C
Q psy9182         232 ENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQ---CIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVWDV-N  302 (486)
Q Consensus       232 ~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vwd~-~  302 (486)
                      .|...+  +++++++++|++++.||.|++||+.+++   ....+.+|...|.+++|  +++ ++++|+.||.|++||+ .
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~   88 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence            344444  4566789999999999999999998776   34555689999999998  788 9999999999999999 8


Q ss_pred             CCcEEEEecc--cCccEEEEEEc-CCeEEEEeCCCcEEEEECCC---------CCceeeEEeeecCcccEEEEEeCCCEE
Q psy9182         303 TGEMVNTLIH--HCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVS---------PNEITLRRVLVGHRAAVNVVDFDEKYI  370 (486)
Q Consensus       303 ~~~~~~~~~~--~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~l  370 (486)
                      +++. ..+..  |...|.+++|+ ++.+++++.|+.|++||+++         .+...   .+ .|...+.++.+.+..+
T Consensus        89 ~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~-~~~~~v~~~~~~~~~l  163 (342)
T 1yfq_A           89 SPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN---NT-KVKNKIFTMDTNSSRL  163 (342)
T ss_dssp             SSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS---SS-SSCCCEEEEEECSSEE
T ss_pred             CCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeee---EE-eeCCceEEEEecCCcE
Confidence            7765 67777  99999999998 57999999999999999986         44332   22 2788999999977779


Q ss_pred             EEEeCCCcEEEEECCC-ce--EEEEEcCCcccEEEEEeC---CCEEEEEeCCCcEEEEECCCC------eeeEEecCccc
Q psy9182         371 VSASGDRTIKVWNTSS-CE--FVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEE  438 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~-~~--~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~------~~~~~~~~h~~  438 (486)
                      ++++.|+.|++||+++ +.  .......|...+.++.++   ++++++++.||.|++|+++..      +....+..|..
T Consensus       164 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
T 1yfq_A          164 IVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL  243 (342)
T ss_dssp             EEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred             EEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccc
Confidence            9999999999999998 54  334555788889998884   689999999999999999887      78888888865


Q ss_pred             ---------CeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         439 ---------LVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       439 ---------~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                               .|.+++|  ++++|++++.||.|++||+.++.
T Consensus       244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~  284 (342)
T 1yfq_A          244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence                     9999999  78999999999999999998654

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2.8e-28  Score=251.34  Aligned_cols=242  Identities=20%  Similarity=0.301  Sum_probs=202.3

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccc--cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTS--SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~--~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...|.++.++|++++|++|+.||.|+|||+.  +++.+..+.+|...|.+++|++               +      
T Consensus         6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~---------------~------   64 (753)
T 3jro_A            6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH---------------P------   64 (753)
T ss_dssp             --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC---------------T------
T ss_pred             ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC---------------C------
Confidence            4678899999999999999999999999999998  6678889999999999998852               0      


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                     .+++++++|+.||.|++
T Consensus        65 ---------------------------------------------------------------~~~~~l~s~s~Dg~I~v   81 (753)
T 3jro_A           65 ---------------------------------------------------------------KFGTILASCSYDGKVLI   81 (753)
T ss_dssp             ---------------------------------------------------------------TSCSEEEEEETTSCEEE
T ss_pred             ---------------------------------------------------------------CCCCEEEEEeCCCeEEE
Confidence                                                                           02566777888888888


Q ss_pred             EECCCce--eeEEEcCCcccEEEEEe--c--CCEEEEEeCCCcEEEEECCCCc--EEEEecccCccEEEEEEcC------
Q psy9182         259 WDRVSLQ--CIKVLTGHTGSVLCLQY--D--ERVIISGSSDSTVRVWDVNTGE--MVNTLIHHCEAVLHLRFSN------  324 (486)
Q Consensus       259 ~d~~~~~--~~~~~~~~~~~v~~~~~--~--~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~i~~~~~~~------  324 (486)
                      ||+.+++  .+..+.+|...|.++.|  +  ++.+++|+.||.|++||++++.  ....+..|...|.++.|++      
T Consensus        82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~  161 (753)
T 3jro_A           82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED  161 (753)
T ss_dssp             EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred             EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence            8877776  66778889999999999  4  7899999999999999998773  3455678889999999976      


Q ss_pred             ---------CeEEEEeCCCcEEEEECCCCCce-eeEEeeecCcccEEEEEe--C---CCEEEEEeCCCcEEEEECCCce-
Q psy9182         325 ---------GMMVTCSKDRSIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF--D---EKYIVSASGDRTIKVWNTSSCE-  388 (486)
Q Consensus       325 ---------~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~--~---~~~l~~~~~d~~i~iwd~~~~~-  388 (486)
                               ..+++|+.||.|++||++++... .....+.+|...|.++.|  +   ++++++++.||.|++||+.+++ 
T Consensus       162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~  241 (753)
T 3jro_A          162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG  241 (753)
T ss_dssp             -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred             cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence                     48999999999999999887543 344567789999999999  4   7899999999999999998864 


Q ss_pred             ----EEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCC
Q psy9182         389 ----FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       389 ----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~  426 (486)
                          .......|...+.++.|  +++++++|+.||.|++||+.+
T Consensus       242 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred             cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence                33334568888888888  488999999999999999974

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.96  E-value=2.2e-27  Score=229.05  Aligned_cols=234  Identities=20%  Similarity=0.357  Sum_probs=198.0

Q ss_pred             ccceEEEEeC-CCEEEEEecCCeEEEEECCC----------ceeeEEEcCCcccEEEEEe--cCC-EEEEEeCCCcEEEE
Q psy9182         234 SKGVYCLQYD-DHKIVSGLRDNTIKVWDRVS----------LQCIKVLTGHTGSVLCLQY--DER-VIISGSSDSTVRVW  299 (486)
Q Consensus       234 ~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~vw  299 (486)
                      ....++++++ +.++++++.+|.|++||+.+          .+.+..+.+|...|.+++|  ++. +|++|+.||.|++|
T Consensus       130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw  209 (430)
T 2xyi_A          130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW  209 (430)
T ss_dssp             CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEE
T ss_pred             cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEE
Confidence            3444556665 67899999999999999876          6778889999999999999  445 99999999999999


Q ss_pred             ECCCCcE-------EEEecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC
Q psy9182         300 DVNTGEM-------VNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE  367 (486)
Q Consensus       300 d~~~~~~-------~~~~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~  367 (486)
                      |+.++..       ...+..|...|.+++|++   ..+++++.||.|++||+++............|...|.++.|  ++
T Consensus       210 d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~  289 (430)
T 2xyi_A          210 DINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS  289 (430)
T ss_dssp             ETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC
T ss_pred             eCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC
Confidence            9987422       355678899999999986   38899999999999999987433333455688999999999  45


Q ss_pred             C-EEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEEEeC--C-CEEEEEeCCCcEEEEECCC--------------Ce
Q psy9182         368 K-YIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIEC--------------GA  428 (486)
Q Consensus       368 ~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~--------------~~  428 (486)
                      . ++++|+.||.|++||+++ ..++..+..|...|.++.|+  + .+|++++.||.|++||+..              .+
T Consensus       290 ~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  369 (430)
T 2xyi_A          290 EFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPE  369 (430)
T ss_dssp             TTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTT
T ss_pred             CCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcc
Confidence            4 799999999999999998 56788999999999999995  4 5799999999999999986              36


Q ss_pred             eeEEecCcccCeEEEEe--cCC-EEEEEeCCCcEEEEeCCCC
Q psy9182         429 CLRVLEGHEELVRCIRF--DAK-RIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       429 ~~~~~~~h~~~v~~~~~--~~~-~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+..+.+|...|++++|  ++. +|++++.||.|++|++...
T Consensus       370 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          370 LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             EEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             eEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            77888899999999999  566 8999999999999999764

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.96  E-value=2.4e-27  Score=228.73  Aligned_cols=246  Identities=22%  Similarity=0.368  Sum_probs=195.8

Q ss_pred             cccccccccccCCccC-cceEEEeecCceeeeccccc----------ccceeeecCcccceeEEEeecceeEecCCCCce
Q psy9182         100 KPMLQRDFISLLPNFD-EKYIVSASGDRTIKVWNTSS----------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI  168 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~-~~~l~tg~~dg~v~iWd~~~----------~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i  168 (486)
                      ...|...+.++.++|+ +.+|++|+.||.|++||+.+          .+.+..+.+|...|.+++|++            
T Consensus       124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~------------  191 (430)
T 2xyi_A          124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP------------  191 (430)
T ss_dssp             EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT------------
T ss_pred             EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC------------
Confidence            3457788999999997 78999999999999999987          567788888988888888863            


Q ss_pred             eccCcc-eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182         169 RYRDEF-QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI  247 (486)
Q Consensus       169 ~~~~~~-~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  247 (486)
                         ++. .|++++.||.|++||+......                                                   
T Consensus       192 ---~~~~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------------------  217 (430)
T 2xyi_A          192 ---NLNGYLLSASDDHTICLWDINATPKE---------------------------------------------------  217 (430)
T ss_dssp             ---TSTTEEEEECTTSCEEEEETTSCCBG---------------------------------------------------
T ss_pred             ---CCCCeEEEEeCCCeEEEEeCCCCCCC---------------------------------------------------
Confidence               333 5666666666666665321000                                                   


Q ss_pred             EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCC---cEEEEecccCccEEEEE
Q psy9182         248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTG---EMVNTLIHHCEAVLHLR  321 (486)
Q Consensus       248 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~i~~~~  321 (486)
                           ...        ......+.+|...|.+++|   ++.++++++.||.|++||++++   +.+..+..|...|.+++
T Consensus       218 -----~~~--------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~  284 (430)
T 2xyi_A          218 -----HRV--------IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS  284 (430)
T ss_dssp             -----GGE--------EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred             -----Cce--------eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence                 000        0113456689999999999   4679999999999999999987   56777788999999999


Q ss_pred             EcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCC---------
Q psy9182         322 FSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSS---------  386 (486)
Q Consensus       322 ~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~---------  386 (486)
                      |+++   .+++|+.||.|++||++.....  ...+..|...|.++.|  ++ .++++++.|+.|++||+..         
T Consensus       285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~--~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~  362 (430)
T 2xyi_A          285 FNPYSEFILATGSADKTVALWDLRNLKLK--LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED  362 (430)
T ss_dssp             ECSSCTTEEEEEETTSEEEEEETTCTTSC--SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH
T ss_pred             eCCCCCCEEEEEeCCCeEEEEeCCCCCCC--eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc
Confidence            9863   6889999999999999985432  2556678999999999  45 5799999999999999987         


Q ss_pred             -----ceEEEEEcCCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCC
Q psy9182         387 -----CEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       387 -----~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~  426 (486)
                           .+.+..+.+|...|.++.|+  +. ++++++.||.|+||++..
T Consensus       363 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~  410 (430)
T 2xyi_A          363 AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE  410 (430)
T ss_dssp             HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred             cccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence                 36778888999999999996  55 899999999999999864

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=2.9e-26  Score=221.64  Aligned_cols=268  Identities=13%  Similarity=0.090  Sum_probs=214.7

Q ss_pred             ccccccCCccCcceEEEeecCceeeeccccccccee-----eecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVR-----TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~-----~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ..+.++.++|++.++++++.++.|++||+.+++.+.     .+.+|...|.+++|+                        
T Consensus       123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~------------------------  178 (433)
T 3bws_A          123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP------------------------  178 (433)
T ss_dssp             SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG------------------------
T ss_pred             CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc------------------------
Confidence            346688889988889999999999999999988776     344666666666653                        


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                                                                                    +++..+++++.|+.|++|
T Consensus       179 --------------------------------------------------------------~~~~~~~s~~~d~~v~~~  196 (433)
T 3bws_A          179 --------------------------------------------------------------EHNELWVSQMQANAVHVF  196 (433)
T ss_dssp             --------------------------------------------------------------GGTEEEEEEGGGTEEEEE
T ss_pred             --------------------------------------------------------------CCCEEEEEECCCCEEEEE
Confidence                                                                          355667888888999999


Q ss_pred             ECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEe---
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCS---  331 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~---  331 (486)
                      |+.+++.+..+..|...+.++++  +++.++ +++.|+.|++||+++++.+..+..+ ..+.+++++++  .+++++   
T Consensus       197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~  275 (433)
T 3bws_A          197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSA  275 (433)
T ss_dssp             ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEES
T ss_pred             ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCC
Confidence            99988888888888889999988  577775 5557999999999999988887664 45889999854  777777   


Q ss_pred             -----CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCE-EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         332 -----KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKY-IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       332 -----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                           .|+.|++||+.+++.....    .+...+..+.+  +++. +++++.++.|++||+.+++.+..+. +...+.++
T Consensus       276 ~~~~~~dg~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~  350 (433)
T 3bws_A          276 SNQESGGGRLGIYSMDKEKLIDTI----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTI  350 (433)
T ss_dssp             CTTCSCCEEEEEEETTTTEEEEEE----EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEE
T ss_pred             CccccCCCeEEEEECCCCcEEeec----cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeE
Confidence                 5889999999887544322    34456777777  6654 5666889999999999999888876 66778888


Q ss_pred             EeC--CCEEEEEeC---------------CCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC-CCcEEEEe
Q psy9182         404 QYR--DRLVVSGSS---------------DNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY-DGKIKVWN  463 (486)
Q Consensus       404 ~~~--~~~l~~~~~---------------dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~-dg~v~iwd  463 (486)
                      .++  ++++++++.               ||.|++||+.+++.+..+..+ ..+.+++|  ++++|++++. |+.|++|+
T Consensus       351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~  429 (433)
T 3bws_A          351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYR  429 (433)
T ss_dssp             EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred             EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence            885  778888876               579999999999999888764 57899999  8889988875 99999999


Q ss_pred             CC
Q psy9182         464 LV  465 (486)
Q Consensus       464 l~  465 (486)
                      ++
T Consensus       430 ~~  431 (433)
T 3bws_A          430 RD  431 (433)
T ss_dssp             ET
T ss_pred             ec
Confidence            86

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=1.5e-26  Score=217.10  Aligned_cols=227  Identities=16%  Similarity=0.186  Sum_probs=181.4

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEE-EEEeCCCcEEEEECCCCcEEEEec
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVI-ISGSSDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~  311 (486)
                      .....+++++++++|++|+.+| +++||..+++.......+...+.++.++++.+ ++++.|+.|++||..+++.+..+.
T Consensus        20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~   98 (355)
T 3vu4_A           20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK   98 (355)
T ss_dssp             CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred             CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence            3445566778999999988775 78999998887766554444445555566666 567888999999999999998886


Q ss_pred             ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCC-CceeeEEeeecCcccEEEEEeCCCEEEE--EeCCCcEEEEECCCce
Q psy9182         312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP-NEITLRRVLVGHRAAVNVVDFDEKYIVS--ASGDRTIKVWNTSSCE  388 (486)
Q Consensus       312 ~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~l~~--~~~d~~i~iwd~~~~~  388 (486)
                       +...|.++.++++.++++. ++.|++||+.+. +.+.....    ...+.++.+  .+++.  |+.||.|++||+.+++
T Consensus        99 -~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~  170 (355)
T 3vu4_A           99 -VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSG  170 (355)
T ss_dssp             -CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSCTTCEEEEECCC--
T ss_pred             -CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCC
Confidence             4668999999998777765 789999999987 44432221    233344443  66666  5789999999999865


Q ss_pred             ----------------EEEEEcCCcccEEEEEeC--CCEEEEEeCCCc-EEEEECCCCeeeEEec-C-cccCeEEEEe--
Q psy9182         389 ----------------FVRTLNGHKRGIACLQYR--DRLVVSGSSDNT-IRLWDIECGACLRVLE-G-HEELVRCIRF--  445 (486)
Q Consensus       389 ----------------~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~-v~iwd~~~~~~~~~~~-~-h~~~v~~~~~--  445 (486)
                                      .+..+.+|...|.+++|+  +++|++|+.||+ |++||+++++++..+. + |...|.+++|  
T Consensus       171 ~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~  250 (355)
T 3vu4_A          171 SATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWST  250 (355)
T ss_dssp             ----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECT
T ss_pred             ccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECC
Confidence                            278899999999999994  899999999998 9999999999999998 5 9999999999  


Q ss_pred             cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         446 DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++++|++++.|++|++||+....
T Consensus       251 ~~~~l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          251 DGSKLAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             TSCEEEEEETTCEEEEEESSCCS
T ss_pred             CCCEEEEEECCCEEEEEEccCCC
Confidence            88999999999999999998653

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.96  E-value=2.8e-26  Score=222.74  Aligned_cols=231  Identities=19%  Similarity=0.227  Sum_probs=193.5

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCce---eeEEEcC-------------------------------------
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ---CIKVLTG-------------------------------------  272 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~-------------------------------------  272 (486)
                      ++...++++++|++++++ .++.|++||+.+++   .+..+..                                     
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            445566788899966555 68899999999888   5555543                                     


Q ss_pred             -----------------CcccEEEEEe--cCCEE-EEEeCCCcEEEEECC--CCcEEEEec--ccCccEEEEEEcCC--e
Q psy9182         273 -----------------HTGSVLCLQY--DERVI-ISGSSDSTVRVWDVN--TGEMVNTLI--HHCEAVLHLRFSNG--M  326 (486)
Q Consensus       273 -----------------~~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~--~~~~~~~~~--~~~~~i~~~~~~~~--~  326 (486)
                                       |.+.|.+++|  ++++| ++++.||.|++||+.  +++.+..+.  .+...|.+++|+++  .
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  163 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT  163 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence                             2336899988  77885 889999999999999  888888776  56688999999864  8


Q ss_pred             EEEEeCCCcEEEEECCCCCcee-eEEeeecCcccEEEEEe--C---CCEEEEEeCCCcEEEEECCCceEEEE-EcCCccc
Q psy9182         327 MVTCSKDRSIAVWDMVSPNEIT-LRRVLVGHRAAVNVVDF--D---EKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRG  399 (486)
Q Consensus       327 l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~~~~~--~---~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~  399 (486)
                      +++++.+|.|++|++.++.... ....+.+|...|.++.|  +   +++|++++.|+.|++||+++++.+.. +.+|...
T Consensus       164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~  243 (450)
T 2vdu_B          164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF  243 (450)
T ss_dssp             EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred             EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence            9999999999999998876543 33356678999999998  6   77999999999999999999988877 5589999


Q ss_pred             EEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecCc-------------------------ccCeEEEEe--cCCEEE
Q psy9182         400 IACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGH-------------------------EELVRCIRF--DAKRIV  451 (486)
Q Consensus       400 v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-------------------------~~~v~~~~~--~~~~l~  451 (486)
                      |.++.| ++++|++++.|+.|++||+++++++..+..+                         ...|.+++|  ++++|+
T Consensus       244 v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~  323 (450)
T 2vdu_B          244 VSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVA  323 (450)
T ss_dssp             EEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEE
T ss_pred             eEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEE
Confidence            999999 5999999999999999999999998888633                         356889999  788999


Q ss_pred             EEe-CCCcEEEEeC
Q psy9182         452 SGA-YDGKIKVWNL  464 (486)
Q Consensus       452 s~~-~dg~v~iwdl  464 (486)
                      +++ .|+.|++|++
T Consensus       324 ~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          324 FFVEATKCIIILEM  337 (450)
T ss_dssp             EEETTCSEEEEEEE
T ss_pred             EEECCCCeEEEEEe
Confidence            998 8999999999

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.95  E-value=8.7e-27  Score=225.27  Aligned_cols=221  Identities=17%  Similarity=0.177  Sum_probs=168.0

Q ss_pred             CCEEEEEecCCeEEEEECCCceee--EEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecc--cCcc
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCI--KVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIH--HCEA  316 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~  316 (486)
                      +.+||+|+.||.|+|||+.+++..  ..+.+|.+.|.+++|   ++++|++|+.||+|++||++++........  +...
T Consensus       132 ~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~  211 (435)
T 4e54_B          132 PSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIW  211 (435)
T ss_dssp             TTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCC
T ss_pred             CCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCcc
Confidence            445777777777777777665443  344579999999998   578999999999999999987655443333  3345


Q ss_pred             EEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC-CEEEEEeCCCcEEEEECCCceEEE
Q psy9182         317 VLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE-KYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       317 i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      +.+++|+++  ++++|+.||.|++||++... +   ..+.+|...|.++.|  ++ .++++++.|+.|++||+++.+...
T Consensus       212 ~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~---~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~  287 (435)
T 4e54_B          212 FCSLDVSASSRMVVTGDNVGNVILLNMDGKE-L---WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA  287 (435)
T ss_dssp             CCCEEEETTTTEEEEECSSSBEEEEESSSCB-C---CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred             EEEEEECCCCCEEEEEeCCCcEeeeccCcce-e---EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc
Confidence            678888754  89999999999999997542 2   456689999999999  33 488899999999999998876544


Q ss_pred             E---EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccC------eEEEEe--cCCEEEEEe----
Q psy9182         392 T---LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL------VRCIRF--DAKRIVSGA----  454 (486)
Q Consensus       392 ~---~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~------v~~~~~--~~~~l~s~~----  454 (486)
                      .   ..+|...|.+++|+  +.+|++++.||.|+|||+.+++....+..|...      +....|  ++..+++++    
T Consensus       288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  367 (435)
T 4e54_B          288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDP  367 (435)
T ss_dssp             CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCT
T ss_pred             eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCC
Confidence            3   35789999999884  889999999999999999999888887766431      222333  444555543    


Q ss_pred             --------CCCcEEEEeCCCCC
Q psy9182         455 --------YDGKIKVWNLVAAL  468 (486)
Q Consensus       455 --------~dg~v~iwdl~~~~  468 (486)
                              .++.|++||+.++.
T Consensus       368 ~~~~~~~~~~~~i~iwd~~~g~  389 (435)
T 4e54_B          368 NFKSCTPYELRTIDVFDGNSGK  389 (435)
T ss_dssp             TSCCSSTTCCCCEEEECSSSCC
T ss_pred             CeEEEEecCCCEEEEEECCCCc
Confidence                    34679999998764

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.95  E-value=4.5e-27  Score=224.96  Aligned_cols=240  Identities=22%  Similarity=0.312  Sum_probs=195.2

Q ss_pred             ccccccccccCCcc-CcceEEEeecCceeeecccccc-------cceeeecCcccceeEEEeecceeEecCCCCceeccC
Q psy9182         101 PMLQRDFISLLPNF-DEKYIVSASGDRTIKVWNTSSC-------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD  172 (486)
Q Consensus       101 ~~~~~~~~~~~~s~-~~~~l~tg~~dg~v~iWd~~~~-------~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~  172 (486)
                      ..|...|.++.++| ++.+|++|+.||.|+|||+.++       +.+..+.+|...|.+++|+                 
T Consensus        78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~-----------------  140 (402)
T 2aq5_A           78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWH-----------------  140 (402)
T ss_dssp             CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEEC-----------------
T ss_pred             ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEEC-----------------
Confidence            35678899999999 9999999999999999999988       5677888898888888875                 


Q ss_pred             cceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCC-CEEEEEe
Q psy9182         173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDD-HKIVSGL  251 (486)
Q Consensus       173 ~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~  251 (486)
                                                                                           +++ .++++++
T Consensus       141 ---------------------------------------------------------------------p~~~~~l~s~~  151 (402)
T 2aq5_A          141 ---------------------------------------------------------------------PTAQNVLLSAG  151 (402)
T ss_dssp             ---------------------------------------------------------------------SSBTTEEEEEE
T ss_pred             ---------------------------------------------------------------------cCCCCEEEEEc
Confidence                                                                                 233 5788899


Q ss_pred             cCCeEEEEECCCceeeEEE--cCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCcc-EEEEEEcCC
Q psy9182         252 RDNTIKVWDRVSLQCIKVL--TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEA-VLHLRFSNG  325 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~-i~~~~~~~~  325 (486)
                      .||.|++||+.+++.+..+  .+|...|.+++|  ++++|++++.||.|++||+++++.+..+ ..|... +.++.|+++
T Consensus       152 ~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (402)
T 2aq5_A          152 CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE  231 (402)
T ss_dssp             TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST
T ss_pred             CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC
Confidence            9999999999999999998  789999999999  7889999999999999999999999888 677665 888999865


Q ss_pred             --eEEEE---eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEE-EeCCCcEEEEECCCceE-EEEEcC-
Q psy9182         326 --MMVTC---SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVS-ASGDRTIKVWNTSSCEF-VRTLNG-  395 (486)
Q Consensus       326 --~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~d~~i~iwd~~~~~~-~~~~~~-  395 (486)
                        ++++|   +.|+.|++||+++.+.... .....+...+.++.+  +++++++ ++.|+.|++||+.+++. +..+.. 
T Consensus       232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~  310 (402)
T 2aq5_A          232 GKILTTGFSRMSERQVALWDTKHLEEPLS-LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF  310 (402)
T ss_dssp             TEEEEEEECTTCCEEEEEEETTBCSSCSE-EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred             CcEEEEeccCCCCceEEEEcCccccCCce-EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence              67777   6899999999988765222 222356677888887  7788865 55799999999998874 444443 


Q ss_pred             -CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCee
Q psy9182         396 -HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       396 -~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                       |...+.++.|.  +.+++  +.++.+++|++.+++.
T Consensus       311 ~~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          311 SSKESQRGMGYMPKRGLEV--NKCEIARFYKLHERKC  345 (402)
T ss_dssp             CCSSCCSEEEECCGGGSCG--GGTEEEEEEEEETTEE
T ss_pred             ccCCcccceEEecccccce--ecceeEEEEEcCCCcE
Confidence             45888899886  44444  4677999999988754

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.1e-26  Score=221.86  Aligned_cols=254  Identities=16%  Similarity=0.104  Sum_probs=195.0

Q ss_pred             CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCcee
Q psy9182         144 GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFL  223 (486)
Q Consensus       144 ~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (486)
                      .-...|.+++|+               +||.++++++.|++|+  |......                            
T Consensus        13 ~~~~~v~sv~~S---------------pDG~~iASas~D~TV~--d~~~~~~----------------------------   47 (588)
T 2j04_A           13 EFEDWKNNLTWA---------------RDGTLYLTTFPDISIG--QPKYAKD----------------------------   47 (588)
T ss_dssp             CCSSSSCCEEEC---------------TTSCEEEECSSSEEEE--EECCCSC----------------------------
T ss_pred             HhhccEEEEEEC---------------CCCCEEEEEcCCceee--cccccce----------------------------
Confidence            345689999998               7999999999999998  5322110                            


Q ss_pred             EEEEeccCCCccceEE--EEeCCCEEEEEecCCeEEEEECCCceeeEEEc-CCcccEEEEEe--cCCEEEEEeCCCcEEE
Q psy9182         224 LQRINCRSENSKGVYC--LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT-GHTGSVLCLQY--DERVIISGSSDSTVRV  298 (486)
Q Consensus       224 ~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg~i~v  298 (486)
                            ..+|...+.+  ++|+|       .++.   |++.+++....+. .|...|.+++|  +|..|++++.||.|++
T Consensus        48 ------l~gh~~~v~~V~FsPdg-------~~~~---~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~i  111 (588)
T 2j04_A           48 ------INCNSKNLFHVKEFPLE-------FENK---LDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSV  111 (588)
T ss_dssp             ------CSSBGGGTEEEEEECCC-------CCCT---TTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred             ------ecCCCccEEEEEECCCC-------Ccce---EEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence                  1134444444  45555       3444   4444444333333 46788999999  8999999999999999


Q ss_pred             EECCCCcEEEEecccCc-----cEEEEEEcCC--eEEEEeCCCcEEEEECCCCCce----eeEEee----ecCcccEEEE
Q psy9182         299 WDVNTGEMVNTLIHHCE-----AVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI----TLRRVL----VGHRAAVNVV  363 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~-----~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~----~~~~~~----~~~~~~v~~~  363 (486)
                      ||...  ++..+. |..     .+.+++|+|+  ++++|+.||.|++||+.++...    .....+    .+|...|.++
T Consensus       112 wd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sV  188 (588)
T 2j04_A          112 FKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHI  188 (588)
T ss_dssp             EETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEE
T ss_pred             EeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEE
Confidence            99654  666666 554     4999999975  9999999999999999887530    112333    6788899999


Q ss_pred             Ee--CCCEEEEEeCCCcEEEEECCCceE---EEEE-cCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182         364 DF--DEKYIVSASGDRTIKVWNTSSCEF---VRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE  437 (486)
Q Consensus       364 ~~--~~~~l~~~~~d~~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~  437 (486)
                      +|  +|  +++++.|+.|++||+.+++.   ..++ .+|...|.+++|.++.||+++ ++.|++||+.+++......+|.
T Consensus       189 awSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~  265 (588)
T 2j04_A          189 VWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSL  265 (588)
T ss_dssp             EEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCC
T ss_pred             EEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCC
Confidence            99  44  88999999999999988773   3567 478889999999888999987 6999999999888755554899


Q ss_pred             cCeEEEEe----cCCEEEEEeCCCcEEEEeCC
Q psy9182         438 ELVRCIRF----DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       438 ~~v~~~~~----~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ..|.+++|    ++..|++++.||+ ++|.++
T Consensus       266 ~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          266 ENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             SCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             ceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence            99999999    5557999999999 999986

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.95  E-value=2.3e-26  Score=216.53  Aligned_cols=189  Identities=15%  Similarity=0.186  Sum_probs=157.5

Q ss_pred             ceEEEEeCCCEEEEEe--cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE--
Q psy9182         236 GVYCLQYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT--  309 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~--  309 (486)
                      .+++++|||+++++++  .|++|+|||+.+++.+..+. |...|.+++|  |++++++++.+ .+.+|+..+++.+..  
T Consensus       137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~  214 (365)
T 4h5i_A          137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT  214 (365)
T ss_dssp             EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC
T ss_pred             EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee
Confidence            4578899999877544  78999999999999998886 7788999998  78999998855 577777777776543  


Q ss_pred             ecccCccEEEEEEcCC--eEEEEeCCC----cEEEEECCCCCce-eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEE
Q psy9182         310 LIHHCEAVLHLRFSNG--MMVTCSKDR----SIAVWDMVSPNEI-TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIK  380 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~--~l~~~~~dg----~i~i~d~~~~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~  380 (486)
                      ...|...+.+++|+++  .+++++.|+    .++.||+...... .....+.+|...|++++|  +|++|++|+.|++|+
T Consensus       215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~  294 (365)
T 4h5i_A          215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA  294 (365)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred             cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence            3557888999999865  788888776    6888988765432 223456788999999998  899999999999999


Q ss_pred             EEECCCceEEEEE-cCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCC
Q psy9182         381 VWNTSSCEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       381 iwd~~~~~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~  426 (486)
                      |||+++++++..+ .+|...|++++|+  +++|++|+.|++|+|||+..
T Consensus       295 iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          295 LVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             EEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             EEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            9999999999885 7899999999994  89999999999999999964

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.4e-26  Score=216.61  Aligned_cols=221  Identities=12%  Similarity=0.097  Sum_probs=178.1

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC---------CCcEEEEec-
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN---------TGEMVNTLI-  311 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~---------~~~~~~~~~-  311 (486)
                      +++..+++|+.||.|++||+.+++.+..+.  ...|.++.+... +++++.|++|++|+..         +++.+..+. 
T Consensus        46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~  122 (343)
T 3lrv_A           46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV  122 (343)
T ss_dssp             EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred             CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence            577889999999999999999998888776  455666667555 9999999999999665         555455443 


Q ss_pred             ccCccEEEEEEcC----CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         312 HHCEAVLHLRFSN----GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       312 ~~~~~i~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~  385 (486)
                      .|...|.++++++    +++++++.||.|++||+++++...  .....+...+.++.|  ++.++++|+.||.|++||++
T Consensus       123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~--~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~  200 (343)
T 3lrv_A          123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI--VHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLS  200 (343)
T ss_dssp             CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE--EECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESS
T ss_pred             CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE--EEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence            5667899999987    389999999999999999887632  222345557888888  78999999999999999999


Q ss_pred             CceEE-EEEcC-CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeE--EEEe--cCCEEEEEe
Q psy9182         386 SCEFV-RTLNG-HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVR--CIRF--DAKRIVSGA  454 (486)
Q Consensus       386 ~~~~~-~~~~~-~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~--~~~~--~~~~l~s~~  454 (486)
                      +++.+ ..+.. |...|.++.|+  +.+|++++ |+.|++||+++++.+..+..   |...+.  +++|  ++++|++++
T Consensus       201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s  279 (343)
T 3lrv_A          201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS  279 (343)
T ss_dssp             CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred             CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence            99887 88888 99999999995  78999999 55999999998877655543   434444  5888  789999999


Q ss_pred             C-CCcEEEEeCCCCC
Q psy9182         455 Y-DGKIKVWNLVAAL  468 (486)
Q Consensus       455 ~-dg~v~iwdl~~~~  468 (486)
                      . |+.|++|++....
T Consensus       280 ~~d~~i~v~~~~~~~  294 (343)
T 3lrv_A          280 NESNSLTIYKFDKKT  294 (343)
T ss_dssp             TTTTEEEEEEECTTT
T ss_pred             CCCCcEEEEEEcccc
Confidence            8 9999999997654

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.95  E-value=4.1e-25  Score=218.02  Aligned_cols=313  Identities=11%  Similarity=0.096  Sum_probs=234.0

Q ss_pred             ccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceee
Q psy9182         109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIW  188 (486)
Q Consensus       109 ~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vW  188 (486)
                      +..++|++.++++++.|++|.+||..+++++.++..+.. +..++|+               +|++++++++.|++|.+|
T Consensus       142 ~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~s---------------pdg~~l~v~~~d~~V~v~  205 (543)
T 1nir_A          142 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMS---------------ASGRYLLVIGRDARIDMI  205 (543)
T ss_dssp             CSCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEEC---------------TTSCEEEEEETTSEEEEE
T ss_pred             ccccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEEC---------------CCCCEEEEECCCCeEEEE
Confidence            445788999999999999999999999999999984433 7888887               688889999999999999


Q ss_pred             ec--ccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe----CCCEEEEEec-CCeEEEEEC
Q psy9182         189 DF--LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY----DDHKIVSGLR-DNTIKVWDR  261 (486)
Q Consensus       189 d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~-dg~i~i~d~  261 (486)
                      |+  .+..                            ....+.  .+....-+++++    +++++++++. +++|.+||.
T Consensus       206 D~~~~t~~----------------------------~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~  255 (543)
T 1nir_A          206 DLWAKEPT----------------------------KVAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG  255 (543)
T ss_dssp             ETTSSSCE----------------------------EEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred             ECcCCCCc----------------------------EEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence            98  3321                            122222  123345567888    9999998884 899999999


Q ss_pred             CCceeeEEEcCC----------cc-cEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEE--EecccCccEEEEEEcCC
Q psy9182         262 VSLQCIKVLTGH----------TG-SVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVN--TLIHHCEAVLHLRFSNG  325 (486)
Q Consensus       262 ~~~~~~~~~~~~----------~~-~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~i~~~~~~~~  325 (486)
                      .++++++.+..+          .. .+.++.+  ++ .++++...++.|.+||..+++.+.  .+. +...+..+.|+++
T Consensus       256 ~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spd  334 (543)
T 1nir_A          256 ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSS  334 (543)
T ss_dssp             TTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTT
T ss_pred             cccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCC
Confidence            999999888753          22 5777776  33 466777788999999998765433  332 4556778888865


Q ss_pred             --eEEEE-eCCCcEEEEECCCCCceeeEEee-ecCcccEEEE-EeC-CCEEEEEe-CCCcEEEEECCC-------ceEEE
Q psy9182         326 --MMVTC-SKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVV-DFD-EKYIVSAS-GDRTIKVWNTSS-------CEFVR  391 (486)
Q Consensus       326 --~l~~~-~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~-~~~-~~~l~~~~-~d~~i~iwd~~~-------~~~~~  391 (486)
                        +++++ ..++.|.+||+.+++........ ..|......+ ..+ +..++++. .|++|.+||+.+       +++++
T Consensus       335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~  414 (543)
T 1nir_A          335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA  414 (543)
T ss_dssp             SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred             CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence              55544 56899999999988755433211 1254333333 334 55666665 579999999998       89999


Q ss_pred             EEcCCcccEEEEEe--CCCEEEEEe-------CCCcEEEEECCCCeee-EEe--------cCcccCeEEEEe--cCCEEE
Q psy9182         392 TLNGHKRGIACLQY--RDRLVVSGS-------SDNTIRLWDIECGACL-RVL--------EGHEELVRCIRF--DAKRIV  451 (486)
Q Consensus       392 ~~~~~~~~v~~~~~--~~~~l~~~~-------~dg~v~iwd~~~~~~~-~~~--------~~h~~~v~~~~~--~~~~l~  451 (486)
                      ++..|...+..+.+  ++++|++++       .+++|.+||+.+++.. ..+        ..+...+..+.|  +|+.|+
T Consensus       415 ~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~  494 (543)
T 1nir_A          415 ELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW  494 (543)
T ss_dssp             EEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred             EEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence            99999877766666  588999987       2779999999998877 444        355678999999  899887


Q ss_pred             EEe-----CCCcEEEEeCCCCC
Q psy9182         452 SGA-----YDGKIKVWNLVAAL  468 (486)
Q Consensus       452 s~~-----~dg~v~iwdl~~~~  468 (486)
                      ++.     .|+.|.|||..+..
T Consensus       495 ~s~~~~~~~~~~i~v~D~~t~~  516 (543)
T 1nir_A          495 FSVWNGKNDSSALVVVDDKTLK  516 (543)
T ss_dssp             EEEECCTTSCCEEEEEETTTTE
T ss_pred             EEeecCCCCCCeEEEEECCCce
Confidence            663     47999999998653

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.94  E-value=8.1e-24  Score=201.54  Aligned_cols=257  Identities=16%  Similarity=0.185  Sum_probs=197.8

Q ss_pred             ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEec
Q psy9182         174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLR  252 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~  252 (486)
                      ..+++++.|+.|++||+.+...                            ...+...  .....++++++++++ ++++.
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~----------------------------~~~~~~~--~~~~~~~~s~dg~~l~~~~~~   52 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKV----------------------------TATIPVG--SNPMGAVISPDGTKVYVANAH   52 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEE----------------------------EEEEECS--SSEEEEEECTTSSEEEEEEGG
T ss_pred             EEEEEcCCCCEEEEEECCCCeE----------------------------EEEeecC--CCcceEEECCCCCEEEEECCC
Confidence            3578889999999999855332                            1222211  223455677788876 66778


Q ss_pred             CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEE-EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS-GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      |+.|++||+.+++.+..+..+. .+.++++  +++++++ ++.++.|++||+.+++.+..+..+ ..+.+++|+++  .+
T Consensus        53 d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l  130 (391)
T 1l0q_A           53 SNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKL  130 (391)
T ss_dssp             GTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEE
T ss_pred             CCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEE
Confidence            9999999999999998888665 8888888  6777754 556799999999999988877654 46789999865  45


Q ss_pred             -EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE-EEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         328 -VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       328 -~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                       ++++.++.|++||+.+++...   ....+ ..+..+.+  +++++ ++++.++.|++||+++++.+..+.. ...+.++
T Consensus       131 ~~~~~~~~~v~~~d~~~~~~~~---~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~  205 (391)
T 1l0q_A          131 YVTNNGDKTVSVINTVTKAVIN---TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGI  205 (391)
T ss_dssp             EEEETTTTEEEEEETTTTEEEE---EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEE
T ss_pred             EEEeCCCCEEEEEECCCCcEEE---EEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCCccce
Confidence             678889999999998876543   23333 34567777  67777 5677889999999999988877764 4567777


Q ss_pred             EeC--CCEEEEEe---CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEE-EEEeCCCcEEEEeCCCCC
Q psy9182         404 QYR--DRLVVSGS---SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       404 ~~~--~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l-~s~~~dg~v~iwdl~~~~  468 (486)
                      .++  ++++++++   .++.|++||+++++.+..+..|. .+.+++|  ++++| ++++.|+.|++||+.++.
T Consensus       206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~  277 (391)
T 1l0q_A          206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT  277 (391)
T ss_dssp             EECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             EECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence            774  77888887   68999999999999999888765 4788888  67777 677889999999998653

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.94  E-value=9.1e-26  Score=214.89  Aligned_cols=241  Identities=12%  Similarity=0.112  Sum_probs=165.4

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccc-----eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF-----VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~-----~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      .......+++++.+|++|+.|++|+|||..+++.     +..+.+|.+.|.+++|++....                   
T Consensus        90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~-------------------  150 (393)
T 4gq1_A           90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSA-------------------  150 (393)
T ss_dssp             -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECT-------------------
T ss_pred             CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEcccccc-------------------
Confidence            3444556778889999999999999999988764     3457899999999999742100                   


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                                                                                 ....++++|++|+.|++|+||
T Consensus       151 -----------------------------------------------------------~~~~d~~~las~s~D~tv~~W  171 (393)
T 4gq1_A          151 -----------------------------------------------------------DNRLAEQVIASVGDDCTLIIW  171 (393)
T ss_dssp             -----------------------------------------------------------TCSEEEEEEEEEETTSEEEEE
T ss_pred             -----------------------------------------------------------ccCCCCCEEEEEECCCeEEEE
Confidence                                                                       001356678888888888888


Q ss_pred             ECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEe-------------------------c
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTL-------------------------I  311 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~-------------------------~  311 (486)
                      |+.++..+..+..|...+.+++|  ++ .+|++|+.||+|++||+++++.....                         .
T Consensus       172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  251 (393)
T 4gq1_A          172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS  251 (393)
T ss_dssp             EEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred             ECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence            88777777777778888888888  33 47888888888888888876543322                         2


Q ss_pred             ccCccEEEEEEc---CCeEEEEeCCCcEEEEECCCCCceeeEEe----------------eecCcccEEEEEe---CCCE
Q psy9182         312 HHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRV----------------LVGHRAAVNVVDF---DEKY  369 (486)
Q Consensus       312 ~~~~~i~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------~~~~~~~v~~~~~---~~~~  369 (486)
                      .|...+.++.|.   +..+++++.|+.+++||+..++.......                ...+...+..+.+   ++.+
T Consensus       252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (393)
T 4gq1_A          252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF  331 (393)
T ss_dssp             CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred             cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence            455667788875   34899999999999999987653321110                0111111112222   3446


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~  424 (486)
                      +++|+.||.|++||+.+++....+..|...|.+++|+  |++||+++.+| +.+|.+
T Consensus       332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL  387 (393)
T 4gq1_A          332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL  387 (393)
T ss_dssp             EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred             EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence            7788899999999999999988888999999999995  89999999776 555544

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.93  E-value=2.1e-24  Score=193.75  Aligned_cols=217  Identities=13%  Similarity=0.129  Sum_probs=153.6

Q ss_pred             hcccccccccccCCccC----cceEEEeecCceeeecccccccceee-ecCcccceeEEEeecceeEecCCCCceeccCc
Q psy9182          99 LKPMLQRDFISLLPNFD----EKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE  173 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~----~~~l~tg~~dg~v~iWd~~~~~~~~~-l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~  173 (486)
                      +...+.+.+.+++++||    ++++++++.  .+++|++.+++++.+ ..+|...|..+++++               ++
T Consensus       106 ~~~~~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---------------dG  168 (356)
T 2w18_A          106 LGNLEIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---------------DG  168 (356)
T ss_dssp             ECSSSEEEEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECT---------------TS
T ss_pred             eccccccceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECC---------------CC
Confidence            33455568888899999    888998774  477888877776655 355655555555431               11


Q ss_pred             ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEe---CCCEEEEE
Q psy9182         174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY---DDHKIVSG  250 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~  250 (486)
                      +.+                                                ..+. .+.....++++++   ++.+|++|
T Consensus       169 ~~~------------------------------------------------~s~~-~~~~~v~~l~fs~~~g~~~~LaSg  199 (356)
T 2w18_A          169 GGK------------------------------------------------ENQF-LMPPEETILTFAEVQGMQEALLGT  199 (356)
T ss_dssp             CEE------------------------------------------------EEEE-ECCCSSCEEEEEEEETSTTEEEEE
T ss_pred             cee------------------------------------------------eeec-cCCCceeeEEeeccCCCCceEEEe
Confidence            100                                                0111 2245566788888   77999999


Q ss_pred             ecCCeEEEEECCCceeeEEEcCCcc---cEEEEEe--cCCEE------------EEEeCCCcEEEEECCCCcEEEEe---
Q psy9182         251 LRDNTIKVWDRVSLQCIKVLTGHTG---SVLCLQY--DERVI------------ISGSSDSTVRVWDVNTGEMVNTL---  310 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~~~~~~~~~---~v~~~~~--~~~~l------------~~~~~dg~i~vwd~~~~~~~~~~---  310 (486)
                      +.|++|+|||+.++++++++.+|..   .+.+++|  ++.++            ++|+.|++|++||..+++.+..+   
T Consensus       200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~  279 (356)
T 2w18_A          200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC  279 (356)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred             cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence            9999999999999999999987543   4555455  66665            66888999999999999987765   


Q ss_pred             --cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEE-EEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         311 --IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN-VVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       311 --~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                        .+|...+.+..+++..+++++.|++|++||+.+++..   ..+.+|...+. +++|  +|++|++|+.|++|++||+
T Consensus       280 ~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l---~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          280 LPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCT---ALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             CCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEE---EEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             ccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEE---EEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence              3555566666777778999999999999999998765   45667766544 4566  8999999999999999995

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.92  E-value=2e-23  Score=195.06  Aligned_cols=201  Identities=18%  Similarity=0.356  Sum_probs=171.3

Q ss_pred             EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC----cEEEEecccCccEEEEEEcC----CeEEEEeCCCcEE
Q psy9182         268 KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG----EMVNTLIHHCEAVLHLRFSN----GMMVTCSKDRSIA  337 (486)
Q Consensus       268 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~~~----~~l~~~~~dg~i~  337 (486)
                      ..+.+|.+.|.+++|  ++++|++|+.||.|++||+.++    +....+..|...|.+++|++    .++++++.||.|+
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~   84 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK   84 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred             ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence            346789999999999  7889999999999999999876    46677788999999999975    4899999999999


Q ss_pred             EEECCCCCc------eeeEEeeecCcccEEEEEe--C--CCEEEEEeCCCcEEEEECCCceEEEEEc-------------
Q psy9182         338 VWDMVSPNE------ITLRRVLVGHRAAVNVVDF--D--EKYIVSASGDRTIKVWNTSSCEFVRTLN-------------  394 (486)
Q Consensus       338 i~d~~~~~~------~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------------  394 (486)
                      +||++.+..      ......+..|...|.++.|  +  +.++++++.|+.|++||+++++.+..+.             
T Consensus        85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  164 (351)
T 3f3f_A           85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA  164 (351)
T ss_dssp             EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred             EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence            999987642      1334566789999999999  4  8899999999999999998876544332             


Q ss_pred             CCcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCCee--eEEecCcccCeEEEEe--cC----CEEEEEeCCCcEEE
Q psy9182         395 GHKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRF--DA----KRIVSGAYDGKIKV  461 (486)
Q Consensus       395 ~~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~h~~~v~~~~~--~~----~~l~s~~~dg~v~i  461 (486)
                      .|...+.++.++     +.++++++.|+.+.+|+...++.  +..+.+|...|++++|  ++    ++|++++.||.|++
T Consensus       165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i  244 (351)
T 3f3f_A          165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI  244 (351)
T ss_dssp             SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred             CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence            577788898884     78999999999999998887765  7778899999999999  54    68999999999999


Q ss_pred             EeCCCCC
Q psy9182         462 WNLVAAL  468 (486)
Q Consensus       462 wdl~~~~  468 (486)
                      ||+....
T Consensus       245 wd~~~~~  251 (351)
T 3f3f_A          245 FKITEKL  251 (351)
T ss_dssp             EEEEECC
T ss_pred             EeCCCCc
Confidence            9998754

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.92  E-value=1.1e-21  Score=189.37  Aligned_cols=226  Identities=16%  Similarity=0.142  Sum_probs=183.5

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeE-----EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIK-----VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      .+++++++.++++++.++.|++||..+++...     .+.+|...|.++++  ++.++++++.|+.|++||+++++.+..
T Consensus       127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~  206 (433)
T 3bws_A          127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT  206 (433)
T ss_dssp             CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred             EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE
Confidence            45667767778888888999999999998887     34578889999999  788999999999999999999999999


Q ss_pred             ecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--------CC
Q psy9182         310 LIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--------GD  376 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--------~d  376 (486)
                      +..+...+.+++|+++  .+ ++++.++.|++||+++++..   ..... ...+.++.+  +++++++++        .|
T Consensus       207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~---~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d  282 (433)
T 3bws_A          207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI---RKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGG  282 (433)
T ss_dssp             EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE---EECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred             EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE---EEecC-CCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence            9888899999999864  55 45558999999999887543   22222 345777877  788888887        58


Q ss_pred             CcEEEEECCCceEEEEEcCCcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV  451 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~  451 (486)
                      +.|++||+.+++.+..+ .|...+.++.++  ++ ++++++.|+.|++||+.+++.+..+. +...+.+++|  ++++|+
T Consensus       283 g~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~  360 (433)
T 3bws_A          283 GRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLY  360 (433)
T ss_dssp             EEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEE
T ss_pred             CeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEE
Confidence            89999999999877765 345577777774  55 45677899999999999999888876 6678999999  788888


Q ss_pred             EEeC---------------CCcEEEEeCCCCC
Q psy9182         452 SGAY---------------DGKIKVWNLVAAL  468 (486)
Q Consensus       452 s~~~---------------dg~v~iwdl~~~~  468 (486)
                      +++.               ||.|++||+.++.
T Consensus       361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~  392 (433)
T 3bws_A          361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT  392 (433)
T ss_dssp             EEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred             EEecCCCccccccccccccceEEEEEECCCCc
Confidence            8876               5799999998653

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.91  E-value=5e-22  Score=190.16  Aligned_cols=302  Identities=10%  Similarity=0.041  Sum_probs=209.9

Q ss_pred             cccccCCccCcc-eEEEee----cCc----eeeeccc--ccccce--eeecCcccceeEEEeecceeEecCCCCceeccC
Q psy9182         106 DFISLLPNFDEK-YIVSAS----GDR----TIKVWNT--SSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD  172 (486)
Q Consensus       106 ~~~~~~~s~~~~-~l~tg~----~dg----~v~iWd~--~~~~~~--~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~  172 (486)
                      .+....+++.|. ++++|+    .||    .|+|||+  .+++.+  ..+.+|...+..+++.....+.....+. ....
T Consensus        64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~-~~~~  142 (415)
T 2hqs_A           64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGI-KGAF  142 (415)
T ss_dssp             GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSS-CCCT
T ss_pred             CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCC-CCcC
Confidence            444455555554 566776    467    9999999  999877  5588998888877764210000000000 0011


Q ss_pred             cceeecCCCC------CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE
Q psy9182         173 EFQIVSSSHD------DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK  246 (486)
Q Consensus       173 ~~~l~s~s~d------g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  246 (486)
                      +..++.++.+      +.|++||++....                             ..+..+ .......+++|+++.
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-----------------------------~~l~~~-~~~v~~~~~Spdg~~  192 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ-----------------------------FVVHRS-PQPLMSPAWSPDGSK  192 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTSCSC-----------------------------EEEEEE-SSCEEEEEECTTSSE
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCCCCC-----------------------------EEEeCC-CCcceeeEEcCCCCE
Confidence            3334444332      7999999743211                             111111 223445677889999


Q ss_pred             EEEEecCC---eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCc--EEEEECCCCcEEEEecccCccEE
Q psy9182         247 IVSGLRDN---TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDST--VRVWDVNTGEMVNTLIHHCEAVL  318 (486)
Q Consensus       247 l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~i~  318 (486)
                      |++++.++   .|++||+.+++.. .+..|...+.+++|  |++.|+ +++.++.  |++||+.+++. ..+..+...+.
T Consensus       193 la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~  270 (415)
T 2hqs_A          193 LAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNT  270 (415)
T ss_dssp             EEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEE
T ss_pred             EEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCccc
Confidence            99999885   9999999998875 46667888989888  788777 6666655  99999998876 56777788899


Q ss_pred             EEEEcCC--eEEEEeC-CC--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC---CcEEEEECCCce
Q psy9182         319 HLRFSNG--MMVTCSK-DR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD---RTIKVWNTSSCE  388 (486)
Q Consensus       319 ~~~~~~~--~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---~~i~iwd~~~~~  388 (486)
                      ++.|+++  .+++++. ++  .|++||+.+++..    .+..+...+..+.|  +|++|+.++.+   ..|++||+.+++
T Consensus       271 ~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~  346 (415)
T 2hqs_A          271 EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ----RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG  346 (415)
T ss_dssp             EEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE----ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred             ceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE----EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence            9999865  6777765 44  6778898876532    23345566777777  88998888764   589999999887


Q ss_pred             EEEEEcCCcccEEEEEe--CCCEEEEEeCCC---cEEEEECCCCeeeEEecCcccCeEEEEecC
Q psy9182         389 FVRTLNGHKRGIACLQY--RDRLVVSGSSDN---TIRLWDIECGACLRVLEGHEELVRCIRFDA  447 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~  447 (486)
                      . ..+..+. .+.++.|  ++++|++++.++   .|++||+. +.....+..|.+.|.+++|.+
T Consensus       347 ~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~  407 (415)
T 2hqs_A          347 V-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP  407 (415)
T ss_dssp             E-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECC
T ss_pred             E-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccc
Confidence            6 4455554 6777777  588888888777   79999987 666788999999999999943

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.89  E-value=2.8e-21  Score=199.78  Aligned_cols=314  Identities=11%  Similarity=0.079  Sum_probs=219.7

Q ss_pred             cccccccCCccCcceEEEeec-Cc-----eeeecccccccceeeecCccc------------------------ceeEEE
Q psy9182         104 QRDFISLLPNFDEKYIVSASG-DR-----TIKVWNTSSCEFVRTLNGHKR------------------------GIACLQ  153 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~-dg-----~v~iWd~~~~~~~~~l~~h~~------------------------~V~~~~  153 (486)
                      ...+.++.++|||++|++++. ||     .|++||+.+++....+..|..                        .|..++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            345778899999999999998 88     999999999988777765533                        367777


Q ss_pred             eecceeEecCCCCceeccCcceeecCCCCCcceeeecccc---cccccCCCCCCCCCCCCcccccccccCceeEEEEecc
Q psy9182         154 YRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNY---SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR  230 (486)
Q Consensus       154 ~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (486)
                      |+               +|+++|++++. +.|.+||+.++   .......                              
T Consensus       116 ~S---------------pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~------------------------------  149 (741)
T 2ecf_A          116 WS---------------PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH------------------------------  149 (741)
T ss_dssp             EC---------------TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC------------------------------
T ss_pred             EC---------------CCCCEEEEEeC-CcEEEEECCCCCcceEEEccc------------------------------
Confidence            76               67777877775 89999998664   2111100                              


Q ss_pred             CCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCccc----------------EEEEEe--cCCEEEEEeC
Q psy9182         231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS----------------VLCLQY--DERVIISGSS  292 (486)
Q Consensus       231 ~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----------------v~~~~~--~~~~l~~~~~  292 (486)
                      ........+++|||++|+.++ ++.|++||+.+++.......+...                +.++.|  ||+.|++++.
T Consensus       150 ~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~  228 (741)
T 2ecf_A          150 GEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI  228 (741)
T ss_dssp             SSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred             CCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence            012234567889999999887 569999999998877655544332                244555  8999998877


Q ss_pred             CC---------------------------------cEEEEECCC-CcEEEEec--ccCccEEEEEEcCC--eEEEEeC--
Q psy9182         293 DS---------------------------------TVRVWDVNT-GEMVNTLI--HHCEAVLHLRFSNG--MMVTCSK--  332 (486)
Q Consensus       293 dg---------------------------------~i~vwd~~~-~~~~~~~~--~~~~~i~~~~~~~~--~l~~~~~--  332 (486)
                      |+                                 .|.+||+.+ ++......  .+...+..++| ++  .+++++.  
T Consensus       229 d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~  307 (741)
T 2ecf_A          229 DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR  307 (741)
T ss_dssp             ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEET
T ss_pred             cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecc
Confidence            65                                 789999998 87654433  35677888888 65  5665543  


Q ss_pred             ---CCcEEEEECCCCCceeeEEeeec-CcccEEEEEe--CCCEEEEEeCCCcEEEEECC-CceEEEEEcCCcccEEEE-E
Q psy9182         333 ---DRSIAVWDMVSPNEITLRRVLVG-HRAAVNVVDF--DEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIACL-Q  404 (486)
Q Consensus       333 ---dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~~-~  404 (486)
                         +..|++||+.+++.......... ....+..+.|  ||+++++++.+|.+++|.+. .++ ...+..+...+..+ .
T Consensus       308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~  386 (741)
T 2ecf_A          308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA  386 (741)
T ss_dssp             TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred             cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence               56899999998875433222111 0002234455  88889999999988888765 345 77787787777654 2


Q ss_pred             e--CCCEEE-EEeCCC--cEEEEECCC-CeeeEEecCcccCeEEEEe--cCCEEEEEeCC----CcEEEEeCCCC
Q psy9182         405 Y--RDRLVV-SGSSDN--TIRLWDIEC-GACLRVLEGHEELVRCIRF--DAKRIVSGAYD----GKIKVWNLVAA  467 (486)
Q Consensus       405 ~--~~~~l~-~~~~dg--~v~iwd~~~-~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d----g~v~iwdl~~~  467 (486)
                      |  +++.|+ +++.++  .++||++.. +.....+.. ...+.+++|  |+++|+....+    +.+.+|+...+
T Consensus       387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~  460 (741)
T 2ecf_A          387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE  460 (741)
T ss_dssp             EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred             EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence            4  677665 455555  899999864 665667765 567888999  88887766543    46889987543

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.89  E-value=1.7e-20  Score=185.07  Aligned_cols=267  Identities=12%  Similarity=0.106  Sum_probs=202.7

Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG  250 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  250 (486)
                      +++..+++++.|++|.+||..+...                            +..+..  ++....+++++++++++++
T Consensus       147 p~~~~~vs~~~d~~V~v~D~~t~~~----------------------------~~~i~~--g~~~~~v~~spdg~~l~v~  196 (543)
T 1nir_A          147 LPNLFSVTLRDAGQIALVDGDSKKI----------------------------VKVIDT--GYAVHISRMSASGRYLLVI  196 (543)
T ss_dssp             GGGEEEEEEGGGTEEEEEETTTCCE----------------------------EEEEEC--STTEEEEEECTTSCEEEEE
T ss_pred             CCCEEEEEEcCCCeEEEEECCCceE----------------------------EEEEec--CcccceEEECCCCCEEEEE
Confidence            4667788999999999999755332                            222221  1224456788999999999


Q ss_pred             ecCCeEEEEEC--CCceeeEEEcCCcccEEEEEe------cCCEEEEEeC-CCcEEEEECCCCcEEEEeccc--------
Q psy9182         251 LRDNTIKVWDR--VSLQCIKVLTGHTGSVLCLQY------DERVIISGSS-DSTVRVWDVNTGEMVNTLIHH--------  313 (486)
Q Consensus       251 ~~dg~i~i~d~--~~~~~~~~~~~~~~~v~~~~~------~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~--------  313 (486)
                      +.|+.|.+||+  .+++.+..+.. ...+..+++      +++++++++. +++|.+||..+++++..+..+        
T Consensus       197 ~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~  275 (543)
T 1nir_A          197 GRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT  275 (543)
T ss_dssp             ETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred             CCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccc
Confidence            99999999999  88998888874 344566655      5788888874 899999999999998887642        


Q ss_pred             ---CccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEEC
Q psy9182         314 ---CEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNT  384 (486)
Q Consensus       314 ---~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~  384 (486)
                         ...+..+.++++   .+++...++.|.+||+.+.+.......  .+...+..+.|  +++++++++ .+++|.+||+
T Consensus       276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~  353 (543)
T 1nir_A          276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDS  353 (543)
T ss_dssp             EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred             cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence               236888888853   667778899999999988765432222  23344555556  788776655 5889999999


Q ss_pred             CCceEEEEEcC----CcccEEEEE-eC-CCEEEEEe-CCCcEEEEECCC-------CeeeEEecCcccCeEEEEe--cCC
Q psy9182         385 SSCEFVRTLNG----HKRGIACLQ-YR-DRLVVSGS-SDNTIRLWDIEC-------GACLRVLEGHEELVRCIRF--DAK  448 (486)
Q Consensus       385 ~~~~~~~~~~~----~~~~v~~~~-~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~--~~~  448 (486)
                      .+++++..+..    |.+....+. .+ +.+++++. .|++|.+||+.+       +++++++.+|...+..|++  +++
T Consensus       354 ~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~  433 (543)
T 1nir_A          354 KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS  433 (543)
T ss_dssp             TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC
T ss_pred             CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC
Confidence            99999988874    554443343 34 56667765 689999999998       8999999999988888988  889


Q ss_pred             EEEEEe-------CCCcEEEEeCCCCCCC
Q psy9182         449 RIVSGA-------YDGKIKVWNLVAALDP  470 (486)
Q Consensus       449 ~l~s~~-------~dg~v~iwdl~~~~~~  470 (486)
                      +|++++       .+++|.+||+.+....
T Consensus       434 ~l~v~~~~~~~~~~~~~v~v~d~~~~~~~  462 (543)
T 1nir_A          434 HLYVDTTFNPDARISQSVAVFDLKNLDAK  462 (543)
T ss_dssp             EEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred             cEEEecCCCCCcccCceEEEEECCCCCCC
Confidence            999987       2789999999987644

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.88  E-value=3.7e-20  Score=198.01  Aligned_cols=220  Identities=13%  Similarity=0.108  Sum_probs=173.9

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC-----------cccEE--EEE-ecCCEEEEEeCCCcEEEEEC
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH-----------TGSVL--CLQ-YDERVIISGSSDSTVRVWDV  301 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~v~--~~~-~~~~~l~~~~~dg~i~vwd~  301 (486)
                      ...+++++|+.++.+ .++.|.+||....+ +..+..+           ...+.  +++ .|++.+++++ ++.|.+|++
T Consensus       248 ~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~  324 (1045)
T 1k32_A          248 YPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDV  324 (1045)
T ss_dssp             CEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred             ceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcC
Confidence            456889999988887 58999999985443 3355542           22444  455 5778888877 789999999


Q ss_pred             CCCcEEEEecccCc-cEEEEEEcCC--eEEEEeCCCcEE-EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC
Q psy9182         302 NTGEMVNTLIHHCE-AVLHLRFSNG--MMVTCSKDRSIA-VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG  375 (486)
Q Consensus       302 ~~~~~~~~~~~~~~-~i~~~~~~~~--~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~  375 (486)
                      .+++... +..+.. .+..+.|+ +  .++.++.++.+. +||+..++..   . +.++...+..+.|  +|++|++++.
T Consensus       325 ~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~---~-l~~~~~~~~~~~~SpDG~~la~~~~  398 (1045)
T 1k32_A          325 SGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE---K-FEENLGNVFAMGVDRNGKFAVVAND  398 (1045)
T ss_dssp             TSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE---E-CCCCCCSEEEEEECTTSSEEEEEET
T ss_pred             CCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce---E-ecCCccceeeeEECCCCCEEEEECC
Confidence            8877543 555666 78888888 5  677778788888 8998876532   2 2266777888888  8999999999


Q ss_pred             CCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCC----------cEEEEECCCCeeeEEecCcccCeEEE
Q psy9182         376 DRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN----------TIRLWDIECGACLRVLEGHEELVRCI  443 (486)
Q Consensus       376 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~h~~~v~~~  443 (486)
                      ++.|++||+.+++....+..|...+..+.|  +|++|++++.++          .|++||+.+++ +..+..|...+.++
T Consensus       399 ~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~  477 (1045)
T 1k32_A          399 RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAP  477 (1045)
T ss_dssp             TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEE
T ss_pred             CCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCc
Confidence            999999999999988888788888877777  588888887654          89999999887 67788888889999


Q ss_pred             Ee--cCCEEEEEeCCCcEEEEeCC
Q psy9182         444 RF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       444 ~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +|  ||++|+.++.++...+|+..
T Consensus       478 ~~spdG~~l~~~s~~~~~~~~~~~  501 (1045)
T 1k32_A          478 AFDADSKNLYYLSYRSLDPSPDRV  501 (1045)
T ss_dssp             EECTTSCEEEEEESCCCCCEECSS
T ss_pred             eEcCCCCEEEEEecccCCcCcchh
Confidence            99  89999999999888888864

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.86  E-value=8.5e-19  Score=162.71  Aligned_cols=227  Identities=8%  Similarity=0.096  Sum_probs=153.9

Q ss_pred             EEeCCCEEEEEec-CCeEEEEECCCcee-eEEEcCCcccEEEEEe--cCCEEEEEeCCC---cEEEEECCCCcEEEEecc
Q psy9182         240 LQYDDHKIVSGLR-DNTIKVWDRVSLQC-IKVLTGHTGSVLCLQY--DERVIISGSSDS---TVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       240 ~~~~~~~l~~~~~-dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~  312 (486)
                      ++++++++++++. ++.|.+||..+++. ...+..+..+..++++  ++++++++..++   .|.+||+.+++.+..+..
T Consensus        47 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~  126 (331)
T 3u4y_A           47 ITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI  126 (331)
T ss_dssp             ECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred             EcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence            3456665555544 77899999888877 6666656555543555  788888655553   899999999998887765


Q ss_pred             cCccEEEEEEcCC--eE-EEEeCCCc-EEEEECCCCCceeeE-EeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEEC
Q psy9182         313 HCEAVLHLRFSNG--MM-VTCSKDRS-IAVWDMVSPNEITLR-RVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNT  384 (486)
Q Consensus       313 ~~~~i~~~~~~~~--~l-~~~~~dg~-i~i~d~~~~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~  384 (486)
                      + .....++|+++  .+ ++...++. |.+|++......... ............+.+  +++++++++ .++.|.+||+
T Consensus       127 ~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~  205 (331)
T 3u4y_A          127 P-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET  205 (331)
T ss_dssp             C-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             C-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence            3 45688999875  44 45556688 999999865433211 111233344566776  788665554 6889999999


Q ss_pred             CCceE---EEEEcCCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCCee--eEEecCc----ccC---eEEEEe--cC
Q psy9182         385 SSCEF---VRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWDIECGAC--LRVLEGH----EEL---VRCIRF--DA  447 (486)
Q Consensus       385 ~~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~v~iwd~~~~~~--~~~~~~h----~~~---v~~~~~--~~  447 (486)
                      .+++.   +..+..+ ..+..+.+  ++++++++. .++.|.+||+.+++.  +..+..+    ...   ...++|  |+
T Consensus       206 ~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg  284 (331)
T 3u4y_A          206 QNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTE  284 (331)
T ss_dssp             SSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTS
T ss_pred             CCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCC
Confidence            99887   7777644 34445555  588666554 578899999999887  4444322    222   244677  88


Q ss_pred             CEEEEEeC-CCcEEEEeCCCCC
Q psy9182         448 KRIVSGAY-DGKIKVWNLVAAL  468 (486)
Q Consensus       448 ~~l~s~~~-dg~v~iwdl~~~~  468 (486)
                      ++|++++. ++.|.+||+....
T Consensus       285 ~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          285 TKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             SEEEEEETTTTEEEEEETTSCE
T ss_pred             CEEEEecCCCCcEEEEEecCCc
Confidence            88766554 6699999998653

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.86  E-value=1.8e-18  Score=162.03  Aligned_cols=218  Identities=8%  Similarity=0.069  Sum_probs=159.9

Q ss_pred             EEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCccc---------EEEEEe--cCCEEEEEe--CCCcEEEEECCCC
Q psy9182         239 CLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGS---------VLCLQY--DERVIISGS--SDSTVRVWDVNTG  304 (486)
Q Consensus       239 ~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------v~~~~~--~~~~l~~~~--~dg~i~vwd~~~~  304 (486)
                      ++++++++++ +...++.|.+||..+++.+..+..+...         +.++.+  +++.+++++  .++.|.+||..++
T Consensus        95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~  174 (353)
T 3vgz_A           95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI  174 (353)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred             EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence            3456666544 4445788999999988888777654322         566666  778777765  4788999999999


Q ss_pred             cEEEEecccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe--CCCEEEEEeC-CCc
Q psy9182         305 EMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF--DEKYIVSASG-DRT  378 (486)
Q Consensus       305 ~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~-d~~  378 (486)
                      +.+..+..+...+..+.+++  +.+++++.++.|.+||+.+++........ .++...+..+.+  +++++++++. ++.
T Consensus       175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  254 (353)
T 3vgz_A          175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE  254 (353)
T ss_dssp             EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred             ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence            99888875555577788875  47888899999999999887655333221 124445666666  7887776665 489


Q ss_pred             EEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~  455 (486)
                      |.+||..+++.+..+......-..+..++++++++. .++.|.+||..+++.+..+..+. .+.+++|  ++++|+++..
T Consensus       255 v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~  333 (353)
T 3vgz_A          255 VLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVK  333 (353)
T ss_dssp             EEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEc
Confidence            999999999998888765544445555788665555 68999999999999988887543 6788999  7887777766


Q ss_pred             CC
Q psy9182         456 DG  457 (486)
Q Consensus       456 dg  457 (486)
                      ++
T Consensus       334 ~~  335 (353)
T 3vgz_A          334 QK  335 (353)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.86  E-value=6.4e-20  Score=189.02  Aligned_cols=306  Identities=11%  Similarity=0.065  Sum_probs=204.2

Q ss_pred             ccccccccCCccCcceEEEeecCceeeecccccccceeeecCccc---ceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~---~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ......++.|+|||+++++ +.||+|++||+.+++....+.+|..   .|.+++|+               +|+++|+++
T Consensus        15 ~~~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~S---------------pDg~~l~~~   78 (723)
T 1xfd_A           15 FKIHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEIS---------------PDREYALFS   78 (723)
T ss_dssp             TCCCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEEC---------------TTSSEEEEE
T ss_pred             CcccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEEC---------------CCCCEEEEE
Confidence            3445778899999998876 7899999999999998888888765   48999997               455555555


Q ss_pred             CC---------CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEE
Q psy9182         180 SH---------DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG  250 (486)
Q Consensus       180 s~---------dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  250 (486)
                      +.         ++.+.+||+.++..........                           ........+++|||+.|+.+
T Consensus        79 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~---------------------------~~~~~~~~~~SPdG~~la~~  131 (723)
T 1xfd_A           79 YNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV---------------------------SNAKLQYAGWGPKGQQLIFI  131 (723)
T ss_dssp             ESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC---------------------------CSCCCSBCCBCSSTTCEEEE
T ss_pred             ecCccceeecceeeEEEEECCCCceEeccCCcc---------------------------ccccccccEECCCCCEEEEE
Confidence            44         4778899987654321111000                           01112345688999999998


Q ss_pred             ecCCeEEEEECCCceeeEEEcCCcccE------------------EEEEe--cCCEEEEEeCCC----------------
Q psy9182         251 LRDNTIKVWDRVSLQCIKVLTGHTGSV------------------LCLQY--DERVIISGSSDS----------------  294 (486)
Q Consensus       251 ~~dg~i~i~d~~~~~~~~~~~~~~~~v------------------~~~~~--~~~~l~~~~~dg----------------  294 (486)
                      +. +.|++||+.+++.......+...+                  .++.|  ||+.|++++.++                
T Consensus       132 ~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~  210 (723)
T 1xfd_A          132 FE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIY  210 (723)
T ss_dssp             ET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSS
T ss_pred             EC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCC
Confidence            76 799999999988877666544433                  56777  889999887553                


Q ss_pred             ------------------cEEEEECCCCcEEEEeccc------CccEEEEEEcCC--eEEEEeC----CCcEEEEECCCC
Q psy9182         295 ------------------TVRVWDVNTGEMVNTLIHH------CEAVLHLRFSNG--MMVTCSK----DRSIAVWDMVSP  344 (486)
Q Consensus       295 ------------------~i~vwd~~~~~~~~~~~~~------~~~i~~~~~~~~--~l~~~~~----dg~i~i~d~~~~  344 (486)
                                        .|++||+.+++....+..+      ...+..+.|+++  .+++...    +..|++||+.++
T Consensus       211 ~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g  290 (723)
T 1xfd_A          211 PTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG  290 (723)
T ss_dssp             CCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred             CcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence                              7999999988865566543      567889999976  4544432    357999999888


Q ss_pred             CceeeEEeeecCcccE----EEEEe--CCCEEEE--EeCCC------cEEEEE-CCCce--EEEEEcCCcccEE---EEE
Q psy9182         345 NEITLRRVLVGHRAAV----NVVDF--DEKYIVS--ASGDR------TIKVWN-TSSCE--FVRTLNGHKRGIA---CLQ  404 (486)
Q Consensus       345 ~~~~~~~~~~~~~~~v----~~~~~--~~~~l~~--~~~d~------~i~iwd-~~~~~--~~~~~~~~~~~v~---~~~  404 (486)
                      +.......  .+...+    ..+.|  ||+.|+.  +..++      .|.+|| ..+++  ....+..+...+.   .++
T Consensus       291 ~~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s  368 (723)
T 1xfd_A          291 VCTKKHED--ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD  368 (723)
T ss_dssp             CEEEEEEE--ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred             cceEEEEe--ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence            75432221  122222    13444  8886664  45666      577788 34444  1444543333343   344


Q ss_pred             eCCCEEEEEeCC---CcEEEEECCCC--eeeEEecC---cccCeEEEEe--cCCEEEEEe
Q psy9182         405 YRDRLVVSGSSD---NTIRLWDIECG--ACLRVLEG---HEELVRCIRF--DAKRIVSGA  454 (486)
Q Consensus       405 ~~~~~l~~~~~d---g~v~iwd~~~~--~~~~~~~~---h~~~v~~~~~--~~~~l~s~~  454 (486)
                      .+++.|+..+.+   +.+++|++...  .....+..   |...+..++|  |+++|+...
T Consensus       369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~  428 (723)
T 1xfd_A          369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC  428 (723)
T ss_dssp             TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred             CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence            468888766655   78999998643  23344443   5667888888  788877653

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.86  E-value=1.3e-19  Score=173.45  Aligned_cols=216  Identities=14%  Similarity=0.119  Sum_probs=167.6

Q ss_pred             CCEEEEEecC------CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC---cEEEEECCCCcEEEEecc
Q psy9182         244 DHKIVSGLRD------NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS---TVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       244 ~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~  312 (486)
                      +..++.++.+      +.|++||... .....+.+|...+.+++|  +++.|++++.++   .|++||+.+++.. .+..
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~  220 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVAS  220 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEEC
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eeec
Confidence            5566666554      7999999974 456777778899999988  789999999875   9999999998875 4566


Q ss_pred             cCccEEEEEEcCC--eEE-EEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CC--cEEEE
Q psy9182         313 HCEAVLHLRFSNG--MMV-TCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DR--TIKVW  382 (486)
Q Consensus       313 ~~~~i~~~~~~~~--~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~--~i~iw  382 (486)
                      +...+.+++|+|+  .++ +++.++.  |++||+.+++.    ..+..|...+.++.|  +|++|+.++. ++  .|.+|
T Consensus       221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~  296 (415)
T 2hqs_A          221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI----RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV  296 (415)
T ss_dssp             CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE----EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence            7788999999975  555 5666554  99999988754    334567778888888  7888888876 44  68888


Q ss_pred             ECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCC---CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC
Q psy9182         383 NTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD---NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       383 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~  455 (486)
                      |+.+++. ..+..+...+..+.|  ++++|++++.+   +.|++||+.+++. ..+..|. .+.+++|  ||++|++++.
T Consensus       297 d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~  373 (415)
T 2hqs_A          297 NINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSS  373 (415)
T ss_dssp             ETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred             ECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence            9988764 455566667777777  58888887764   5899999998876 4565554 8899999  8899999888


Q ss_pred             CC---cEEEEeCCCCC
Q psy9182         456 DG---KIKVWNLVAAL  468 (486)
Q Consensus       456 dg---~v~iwdl~~~~  468 (486)
                      |+   .|++||+..+.
T Consensus       374 ~~~~~~l~~~d~~g~~  389 (415)
T 2hqs_A          374 QGMGSVLNLVSTDGRF  389 (415)
T ss_dssp             ETTEEEEEEEETTSCC
T ss_pred             CCCccEEEEEECCCCc
Confidence            77   79999997543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=1.7e-19  Score=185.26  Aligned_cols=307  Identities=13%  Similarity=0.085  Sum_probs=203.9

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccce-eeecCcc-----------------cceeEEEeecceeEecCCCCce
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV-RTLNGHK-----------------RGIACLQYRDRLVVSGSSDNTI  168 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~-~~l~~h~-----------------~~V~~~~~~~~~~~~~~~d~~i  168 (486)
                      +..+.+.  |..+++++.|| | +||+.+|+.+ ..+..|.                 ..|.+++|+             
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s-------------   90 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA-------------   90 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET-------------
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC-------------
Confidence            3444555  55677777788 8 9999999874 4444443                 458888887             


Q ss_pred             eccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEE
Q psy9182         169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIV  248 (486)
Q Consensus       169 ~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  248 (486)
                        +| ..++.+ .++.+++||+.++....                             +... .......+++|+|+.|+
T Consensus        91 --pd-~~~~~~-~~~~i~~~d~~~~~~~~-----------------------------l~~~-~~~~~~~~~SpdG~~la  136 (706)
T 2z3z_A           91 --GR-GLVVLF-TQGGLVGFDMLARKVTY-----------------------------LFDT-NEETASLDFSPVGDRVA  136 (706)
T ss_dssp             --TT-TEEEEE-ETTEEEEEETTTTEEEE-----------------------------EECC-TTCCTTCEECTTSSEEE
T ss_pred             --CC-CeEEEE-ECCEEEEEECCCCceEE-----------------------------ccCC-cccccCCcCCCCCCEEE
Confidence              45 333333 45999999986543211                             1111 12233457899999999


Q ss_pred             EEecCCeEEEEECCC-----ceeeEEEcCCccc--------------EEEEEe--cCCEEEEEe----------------
Q psy9182         249 SGLRDNTIKVWDRVS-----LQCIKVLTGHTGS--------------VLCLQY--DERVIISGS----------------  291 (486)
Q Consensus       249 ~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~--------------v~~~~~--~~~~l~~~~----------------  291 (486)
                      ++ .++.|++||+.+     ++.......+...              +.++.|  |+++|++++                
T Consensus       137 ~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~  215 (706)
T 2z3z_A          137 YV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHP  215 (706)
T ss_dssp             EE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCS
T ss_pred             EE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCC
Confidence            85 689999999998     7766555444432              356666  899999887                


Q ss_pred             -----------------CCCcEEEEECCCCcEEEEec--ccCccEEEEEEcCC--eEEEEeCCC-----cEEEEECCCCC
Q psy9182         292 -----------------SDSTVRVWDVNTGEMVNTLI--HHCEAVLHLRFSNG--MMVTCSKDR-----SIAVWDMVSPN  345 (486)
Q Consensus       292 -----------------~dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~~~~~--~l~~~~~dg-----~i~i~d~~~~~  345 (486)
                                       .+..|++||+.+++......  .+...+.++.|+++  .+++++.++     .|++||+.+++
T Consensus       216 ~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~  295 (706)
T 2z3z_A          216 LEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR  295 (706)
T ss_dssp             SSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred             CCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence                             44679999999887654432  35567899999865  677777665     89999999874


Q ss_pred             ceeeEEeeecCccc---EE--EEEe--CCCEEEEEeCCCcEEEEECC-CceEEEEEcCCcccEEE-EEe--CCCEEEEEe
Q psy9182         346 EITLRRVLVGHRAA---VN--VVDF--DEKYIVSASGDRTIKVWNTS-SCEFVRTLNGHKRGIAC-LQY--RDRLVVSGS  414 (486)
Q Consensus       346 ~~~~~~~~~~~~~~---v~--~~~~--~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~v~~-~~~--~~~~l~~~~  414 (486)
                      ....... ..+...   +.  .+..  +|+++++++.++.+++|++. +++.+..+..+...+.. +.+  +++.|+.++
T Consensus       296 ~~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~  374 (706)
T 2z3z_A          296 FVRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES  374 (706)
T ss_dssp             EEEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE
T ss_pred             eeeEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe
Confidence            3322221 111111   12  3444  78899999999999999876 67777888888777765 566  467666554


Q ss_pred             -CCC----cEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCC----CcEEEEeCCCCC
Q psy9182         415 -SDN----TIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYD----GKIKVWNLVAAL  468 (486)
Q Consensus       415 -~dg----~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d----g~v~iwdl~~~~  468 (486)
                       .++    .|..||+.+++ ...+. |...+.+++|  |+++|+.+..+    +.|++||+.++.
T Consensus       375 ~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          375 TEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             SSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             cCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence             444    67777887765 34444 6677899999  88888776544    569999998763

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.85  E-value=1.1e-18  Score=162.25  Aligned_cols=268  Identities=10%  Similarity=0.051  Sum_probs=189.4

Q ss_pred             ceEEEeecCceeeecccccccceeeecCcc-c-ceeEEEeecceeEecCCCCceeccCcce-eecCCCCCcceeeecccc
Q psy9182         117 KYIVSASGDRTIKVWNTSSCEFVRTLNGHK-R-GIACLQYRDRLVVSGSSDNTIRYRDEFQ-IVSSSHDDTILIWDFLNY  193 (486)
Q Consensus       117 ~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~-~V~~~~~~~~~~~~~~~d~~i~~~~~~~-l~s~s~dg~i~vWd~~~~  193 (486)
                      +++++++.++.|++||..+++.+..+.... . .+..++|+               +++.. +++++.++.|.+||+.+.
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s---------------~dg~~l~v~~~~~~~v~~~d~~~~   66 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVA---------------PGGRIAYATVNKSESLVKIDLVTG   66 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEEC---------------TTSSEEEEEETTTTEEEEEETTTC
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEc---------------CCCCEEEEEeCCCCeEEEEECCCC
Confidence            478999999999999999999888876332 2 36778886               45543 456677889999998654


Q ss_pred             cccccCCCCCCCCCCCCcccccccccCceeEEEEeccC----CCccceEEEEeCCCEEEEEe------------cCCeEE
Q psy9182         194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS----ENSKGVYCLQYDDHKIVSGL------------RDNTIK  257 (486)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~l~~~~------------~dg~i~  257 (486)
                      ....                            .+....    ......+++++++++++++.            .++.|.
T Consensus        67 ~~~~----------------------------~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~  118 (337)
T 1pby_B           67 ETLG----------------------------RIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA  118 (337)
T ss_dssp             CEEE----------------------------EEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred             CeEe----------------------------eEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEE
Confidence            3221                            111100    01233467888999988886            579999


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccC--ccEEEEEEcC--CeEEEEe
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC--EAVLHLRFSN--GMMVTCS  331 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~i~~~~~~~--~~l~~~~  331 (486)
                      +||+.+++.+..+.. ...+.++.+  ++++++++  ++.|.+||+.+++....+..+.  ..+   .+++  ..+++.+
T Consensus       119 v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~  192 (337)
T 1pby_B          119 LYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQH  192 (337)
T ss_dssp             EEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCCC
T ss_pred             EEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeeec
Confidence            999999988877764 334555555  78878777  6889999999998887775433  222   3333  2333222


Q ss_pred             C-CC-----------------------cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         332 K-DR-----------------------SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       332 ~-dg-----------------------~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~  385 (486)
                      . ++                       .|.+||+.+++..  ......+...+..+.+  ++++++++  ++.|.+||+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~  268 (337)
T 1pby_B          193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA--MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE  268 (337)
T ss_dssp             TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE--EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT
T ss_pred             cCCCceeeeeeccccccccccccccccceEEEeCCCCCce--EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECC
Confidence            2 22                       4789999987754  2233445556667777  78888888  6899999999


Q ss_pred             CceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCccc
Q psy9182         386 SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE  438 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~  438 (486)
                      +++.+..+..+. .+.++.+  ++++|++++.++.|.+||+.+++.+..+..+..
T Consensus       269 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~  322 (337)
T 1pby_B          269 KNASIKRVPLPH-SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             TTEEEEEEECSS-CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred             CCcCcceecCCC-ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence            999888876443 3455666  588888888999999999999999888876543

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.84  E-value=9.7e-18  Score=156.17  Aligned_cols=280  Identities=11%  Similarity=0.120  Sum_probs=178.9

Q ss_pred             eEEEeecCceeeecccc-ccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC-Ccceeeeccc-
Q psy9182         118 YIVSASGDRTIKVWNTS-SCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD-DTILIWDFLN-  192 (486)
Q Consensus       118 ~l~tg~~dg~v~iWd~~-~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d-g~i~vWd~~~-  192 (486)
                      .+++++.|+.|++||+. +++  .+.. ..|...+.+++|+               +++.++++++.+ +.|.+|+++. 
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s---------------pdg~~l~~~~~~~~~v~~~~~~~~   70 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVS---------------PDKRYLYVGVRPEFRVLAYRIAPD   70 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEEC---------------TTSSEEEEEETTTTEEEEEEECTT
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEEC---------------CCCCEEEEeecCCCeEEEEEecCC
Confidence            44555789999999995 332  2333 3466678888887               566667666665 8999999852 


Q ss_pred             -ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCeEEEEEC---CCceee
Q psy9182         193 -YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDR---VSLQCI  267 (486)
Q Consensus       193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~---~~~~~~  267 (486)
                       +..                          ..+..+..  ......++++++++++++++. ++.|.+||+   ...+..
T Consensus        71 ~~~~--------------------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~  122 (343)
T 1ri6_A           71 DGAL--------------------------TFAAESAL--PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV  122 (343)
T ss_dssp             TCCE--------------------------EEEEEEEC--SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred             CCce--------------------------eecccccc--CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc
Confidence             110                          01112221  124455778889998877665 889999999   444555


Q ss_pred             EEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCC-CcEEE----Eecc-cCccEEEEEEcCC--eEEEE-eCCCc
Q psy9182         268 KVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNT-GEMVN----TLIH-HCEAVLHLRFSNG--MMVTC-SKDRS  335 (486)
Q Consensus       268 ~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~-~~~~~----~~~~-~~~~i~~~~~~~~--~l~~~-~~dg~  335 (486)
                      ..+..+. .+.++.+  +++++++++ .++.|.+||+.+ ++...    .+.. ....+..+.|+++  .++++ ..++.
T Consensus       123 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~  201 (343)
T 1ri6_A          123 DVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS  201 (343)
T ss_dssp             EEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred             ccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE
Confidence            5655443 4666666  778888777 889999999987 65432    2222 3446788999865  45544 48899


Q ss_pred             EEEEECCC--CCceeeEEeee---cC---cccEEEEEe--CCCEEEEE-eCCCcEEEEECC----CceEEEEEcCCcccE
Q psy9182         336 IAVWDMVS--PNEITLRRVLV---GH---RAAVNVVDF--DEKYIVSA-SGDRTIKVWNTS----SCEFVRTLNGHKRGI  400 (486)
Q Consensus       336 i~i~d~~~--~~~~~~~~~~~---~~---~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~----~~~~~~~~~~~~~~v  400 (486)
                      |.+||+..  ++.. ......   ..   ...+..+.+  ++++++++ ..++.|.+||+.    +.+.+..+..+.. +
T Consensus       202 i~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~  279 (343)
T 1ri6_A          202 VDVWELKDPHGNIE-CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-P  279 (343)
T ss_dssp             EEEEESSCTTSCCE-EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-C
T ss_pred             EEEEEecCCCCcEE-EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-c
Confidence            99999964  3221 111111   11   234556666  67777754 478999999998    3455555655544 6


Q ss_pred             EEEEe--CCCEEEEEe-CCCcEEEE--ECCCCee--eEEecCcccCeEEEEe
Q psy9182         401 ACLQY--RDRLVVSGS-SDNTIRLW--DIECGAC--LRVLEGHEELVRCIRF  445 (486)
Q Consensus       401 ~~~~~--~~~~l~~~~-~dg~v~iw--d~~~~~~--~~~~~~h~~~v~~~~~  445 (486)
                      ..+.+  ++++|++++ .++.|.+|  |..+++.  +..+... ....+++|
T Consensus       280 ~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~  330 (343)
T 1ri6_A          280 RGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVV  330 (343)
T ss_dssp             CCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEE
T ss_pred             ceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEE
Confidence            66666  478888777 68999999  4456643  3344332 33445555

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.84  E-value=8.9e-19  Score=187.32  Aligned_cols=305  Identities=13%  Similarity=0.081  Sum_probs=217.3

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecC-----------cccceeEEEee-cceeEecCCCCceeccCc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-----------HKRGIACLQYR-DRLVVSGSSDNTIRYRDE  173 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~-----------h~~~V~~~~~~-~~~~~~~~~d~~i~~~~~  173 (486)
                      .+....++|||++|+.+ .++.|++||+... .+..+.+           |...+..++|+ +               |+
T Consensus       246 ~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p---------------dG  308 (1045)
T 1k32_A          246 DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPL---------------DG  308 (1045)
T ss_dssp             SSCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEEC---------------GG
T ss_pred             CcceeeEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCC---------------CC
Confidence            34566889999999998 5899999999544 3446655           34467888886 4               56


Q ss_pred             ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC
Q psy9182         174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD  253 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  253 (486)
                      ..+++++ ++.+.+|++........                             ...........+++ +++.++.++.+
T Consensus       309 ~~la~~~-~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~s-dg~~l~~~s~~  357 (1045)
T 1k32_A          309 DLIAFVS-RGQAFIQDVSGTYVLKV-----------------------------PEPLRIRYVRRGGD-TKVAFIHGTRE  357 (1045)
T ss_dssp             GCEEEEE-TTEEEEECTTSSBEEEC-----------------------------SCCSCEEEEEECSS-SEEEEEEEETT
T ss_pred             CEEEEEE-cCEEEEEcCCCCceEEc-----------------------------cCCCcceEEeeeEc-CCCeEEEEECC
Confidence            6666665 78899998754322110                             00001022234456 78888888888


Q ss_pred             CeEE-EEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEE
Q psy9182         254 NTIK-VWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMV  328 (486)
Q Consensus       254 g~i~-i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~  328 (486)
                      +.+. +||..+++... +.+|...+.+++|  |++.|++++.++.|++||+.+++.......+...+..++|+|+  .++
T Consensus       358 ~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la  436 (1045)
T 1k32_A          358 GDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA  436 (1045)
T ss_dssp             EEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred             CceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEE
Confidence            8898 99998876544 3477788888888  8899999999999999999999988777788888899999875  677


Q ss_pred             EEeCC----------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE-------
Q psy9182         329 TCSKD----------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF-------  389 (486)
Q Consensus       329 ~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~-------  389 (486)
                      +++.+          +.|++||+.+++ .   ..+..|...+..+.|  +|++|+.++.++...+|+......       
T Consensus       437 ~~~~~~~~~~~~~~~~~i~l~d~~~g~-~---~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~  512 (1045)
T 1k32_A          437 YGFPLKHGETDGYVMQAIHVYDMEGRK-I---FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK  512 (1045)
T ss_dssp             EEEEECSSTTCSCCEEEEEEEETTTTE-E---EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBE
T ss_pred             EEecCccccccCCCCCeEEEEECCCCc-E---EEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCce
Confidence            66654          489999998764 2   345566777777777  899999999877777776432211       


Q ss_pred             ------------------------------------EEEEcCCcccEEEEEeC--CCEEEE-------------EeCCCc
Q psy9182         390 ------------------------------------VRTLNGHKRGIACLQYR--DRLVVS-------------GSSDNT  418 (486)
Q Consensus       390 ------------------------------------~~~~~~~~~~v~~~~~~--~~~l~~-------------~~~dg~  418 (486)
                                                          +..+..|...+..+.++  +.++++             ...+..
T Consensus       513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~  592 (1045)
T 1k32_A          513 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGV  592 (1045)
T ss_dssp             EEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEE
T ss_pred             eEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCce
Confidence                                                12333455566666664  555664             123557


Q ss_pred             EEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       419 v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      |.+||+.+++.....    ..+.+++|  ||++|++++.| .|++||+.++.
T Consensus       593 l~~~d~~~~~~~~l~----~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~  639 (1045)
T 1k32_A          593 LLKYDVKTRKVTEVK----NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP  639 (1045)
T ss_dssp             EEEEETTTCCEEEEE----EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred             EEEEECCCCcEEEee----cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence            889999888754333    56778888  89999998866 79999998765

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.83  E-value=8.2e-18  Score=156.68  Aligned_cols=229  Identities=14%  Similarity=0.170  Sum_probs=154.8

Q ss_pred             ccceEEEEeCCCEEEEEecC-CeEEEEECC--Cce--eeEEEcCCcccEEEEEe--cCCEEEEEeC-CCcEEEEECC---
Q psy9182         234 SKGVYCLQYDDHKIVSGLRD-NTIKVWDRV--SLQ--CIKVLTGHTGSVLCLQY--DERVIISGSS-DSTVRVWDVN---  302 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~d-g~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~---  302 (486)
                      ....++++++++++++++.+ +.|.+|++.  +++  .+..+..+. .+.++++  +++++++++. ++.|.+||+.   
T Consensus        39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~  117 (343)
T 1ri6_A           39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL  117 (343)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE
T ss_pred             CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc
Confidence            34457788999998888887 899999987  444  344555443 5666776  7787766654 8889999994   


Q ss_pred             CCcEEEEecccCccEEEEEEcCC--eEEEEe-CCCcEEEEECCC-CCceeeE--EeeecCcccEEEEEe--CCCEEEEEe
Q psy9182         303 TGEMVNTLIHHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVS-PNEITLR--RVLVGHRAAVNVVDF--DEKYIVSAS  374 (486)
Q Consensus       303 ~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~-~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~  374 (486)
                      +.+....+.. ...+.+++|+++  .+++++ .++.|.+||+.+ ++.....  .........+..+.+  +++++++++
T Consensus       118 ~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~  196 (343)
T 1ri6_A          118 PVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN  196 (343)
T ss_dssp             EEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred             cccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence            3344444443 345778888864  677766 899999999987 4332211  112223345666777  778776555


Q ss_pred             -CCCcEEEEECCC--ceE--EEEEc---CC---cccEEEEEeC--CCEEE-EEeCCCcEEEEECC--C--CeeeEEecCc
Q psy9182         375 -GDRTIKVWNTSS--CEF--VRTLN---GH---KRGIACLQYR--DRLVV-SGSSDNTIRLWDIE--C--GACLRVLEGH  436 (486)
Q Consensus       375 -~d~~i~iwd~~~--~~~--~~~~~---~~---~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~--~--~~~~~~~~~h  436 (486)
                       .++.|.+||+..  ++.  ...+.   ..   ...+..+.++  +++|+ ++..++.|.+||+.  +  .+.+..+..+
T Consensus       197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~  276 (343)
T 1ri6_A          197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE  276 (343)
T ss_dssp             TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS
T ss_pred             CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC
Confidence             789999999953  432  22332   11   2245566664  77776 44579999999998  2  3455556555


Q ss_pred             ccCeEEEEe--cCCEEEEEe-CCCcEEEEeCC
Q psy9182         437 EELVRCIRF--DAKRIVSGA-YDGKIKVWNLV  465 (486)
Q Consensus       437 ~~~v~~~~~--~~~~l~s~~-~dg~v~iwdl~  465 (486)
                      .. +.+++|  ++++|++++ .|+.|.+|+++
T Consensus       277 ~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d  307 (343)
T 1ri6_A          277 TQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV  307 (343)
T ss_dssp             SS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred             Cc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence            44 888899  788888887 68999999665

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.81  E-value=2.8e-18  Score=156.09  Aligned_cols=212  Identities=14%  Similarity=0.112  Sum_probs=150.0

Q ss_pred             EeCCCEEEEEecCCeEEEEECCC-ceeeEEEcCCc-ccEEEEEe--cCCEEEEEeC--CC--cEEEEECCCCcEEEEecc
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVS-LQCIKVLTGHT-GSVLCLQY--DERVIISGSS--DS--TVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~--dg--~i~vwd~~~~~~~~~~~~  312 (486)
                      +++++++++++ ++.|++||+.+ ++.......+. ..+.++.|  +++++++++.  ++  .|..++..+++ ...+..
T Consensus        50 spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~  127 (297)
T 2ojh_A           50 SPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK  127 (297)
T ss_dssp             CTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS
T ss_pred             CCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec
Confidence            45666677665 67888888888 77666665553 55666666  7889999883  34  45555555554 334433


Q ss_pred             cCccEEEEEEcCC--eEE-EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECC-
Q psy9182         313 HCEAVLHLRFSNG--MMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTS-  385 (486)
Q Consensus       313 ~~~~i~~~~~~~~--~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~-  385 (486)
                      + ..+..+.|+++  .++ ++..++.+++|++......  ...+..+...+.++.|  ++++++.++ .++.+++|++. 
T Consensus       128 ~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~  204 (297)
T 2ojh_A          128 N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV  204 (297)
T ss_dssp             S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC--EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred             C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc--ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence            3 34888899865  454 7788999999986432211  1344556777888888  788777666 58999999886 


Q ss_pred             CceEEEEEcCCcccEEEEEe--CCCEEEEEeCC-----------CcEEEEECCCCee--eEEecCcccCeEEEEe--cCC
Q psy9182         386 SCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD-----------NTIRLWDIECGAC--LRVLEGHEELVRCIRF--DAK  448 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----------g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~--~~~  448 (486)
                      .+..+..+..|...+..+.|  ++++|++++.+           +.|++||+.+++.  +..+.+|...+.+++|  +++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~  284 (297)
T 2ojh_A          205 DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD  284 (297)
T ss_dssp             TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred             CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCC
Confidence            55667778888888888887  47888888765           5699999998765  4445578888999999  888


Q ss_pred             EEEEEeCCC
Q psy9182         449 RIVSGAYDG  457 (486)
Q Consensus       449 ~l~s~~~dg  457 (486)
                      +|++++.|.
T Consensus       285 ~l~~~~~~~  293 (297)
T 2ojh_A          285 EFAYVRYFP  293 (297)
T ss_dssp             EEEEEEECC
T ss_pred             EEEEEEecc
Confidence            888887654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.81  E-value=1.2e-17  Score=171.48  Aligned_cols=319  Identities=12%  Similarity=0.085  Sum_probs=200.8

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      ..+.++.++|| ++++.+ .++.|++||+.+++... +..+...+.+++|+               +|++.|+++ .|+.
T Consensus        82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~S---------------pdG~~la~~-~~~~  142 (706)
T 2z3z_A           82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFS---------------PVGDRVAYV-RNHN  142 (706)
T ss_dssp             CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEEC---------------TTSSEEEEE-ETTE
T ss_pred             cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCC---------------CCCCEEEEE-ECCe
Confidence            46788899999 555555 45999999999886544 44566678888887               677778774 6899


Q ss_pred             ceeeeccc-----ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--------
Q psy9182         185 ILIWDFLN-----YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL--------  251 (486)
Q Consensus       185 i~vWd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--------  251 (486)
                      |++||+.+     +............       +    ..+..    ............+++|||++|++++        
T Consensus       143 i~v~~~~~~~~~~g~~~~~~~~~~~~-------~----~~g~~----~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~  207 (706)
T 2z3z_A          143 LYIARGGKLGEGMSRAIAVTIDGTET-------L----VYGQA----VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKP  207 (706)
T ss_dssp             EEEEECBCTTSCCCCCEESCSCCBTT-------E----EESSC----CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCC
T ss_pred             EEEEecCcccccCCCcEEeccCCCCC-------e----Ecccc----hhhhhcCCCceEEECCCCCEEEEEEECCCCCce
Confidence            99999876     4332211111000       0    00000    0000011234567899999999987        


Q ss_pred             -------------------------cCCeEEEEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCC-----cEE
Q psy9182         252 -------------------------RDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDS-----TVR  297 (486)
Q Consensus       252 -------------------------~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg-----~i~  297 (486)
                                               .+..|++||+.+++......  .|...+.+++|  |++.|++++.++     .|.
T Consensus       208 ~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~  287 (706)
T 2z3z_A          208 TPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVN  287 (706)
T ss_dssp             EEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEE
T ss_pred             EEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEE
Confidence                                     44689999999988655442  46677888888  888899887775     899


Q ss_pred             EEECCCCcEEEEec-c-cCc---cEEEEEEcC--C--eEEEEeCCCcEEEEECC-CCCceeeEEeeecCcccEEE-EEe-
Q psy9182         298 VWDVNTGEMVNTLI-H-HCE---AVLHLRFSN--G--MMVTCSKDRSIAVWDMV-SPNEITLRRVLVGHRAAVNV-VDF-  365 (486)
Q Consensus       298 vwd~~~~~~~~~~~-~-~~~---~i~~~~~~~--~--~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~-~~~-  365 (486)
                      +||+.+++....+. . +..   .+..+.|++  +  +++++..++.+++|++. ++...   ..+..+...+.. +.| 
T Consensus       288 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~---~~l~~~~~~v~~~~~~s  364 (706)
T 2z3z_A          288 AYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI---RQVTKGEWEVTNFAGFD  364 (706)
T ss_dssp             EEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEE---EECCCSSSCEEEEEEEC
T ss_pred             EEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEE---EecCCCCeEEEeeeEEc
Confidence            99999984433332 2 121   235677876  4  77788889999999876 33322   344456666654 566 


Q ss_pred             -CCCEEEEEeC-CC----cEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCC----CcEEEEECCCCeeeEEe
Q psy9182         366 -DEKYIVSASG-DR----TIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD----NTIRLWDIECGACLRVL  433 (486)
Q Consensus       366 -~~~~l~~~~~-d~----~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~v~iwd~~~~~~~~~~  433 (486)
                       +++.|+.++. ++    .|..||+.+++ ...+. +...+..+.+  ++++++....+    +.|++||+.+++ ...+
T Consensus       365 pdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~  441 (706)
T 2z3z_A          365 PKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLL  441 (706)
T ss_dssp             TTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE-EEEE
T ss_pred             CCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe-Eeec
Confidence             7777766554 44    67778887765 33443 5666777777  47777766443    569999999887 4333


Q ss_pred             cCcccCeEEEEe-cCCEEEEEeCCC--cEEEEeC
Q psy9182         434 EGHEELVRCIRF-DAKRIVSGAYDG--KIKVWNL  464 (486)
Q Consensus       434 ~~h~~~v~~~~~-~~~~l~s~~~dg--~v~iwdl  464 (486)
                      . +...+....+ ....+...+.||  .+..|-.
T Consensus       442 ~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  474 (706)
T 2z3z_A          442 E-AKNPDTGYAMPEIRTGTIMAADGQTPLYYKLT  474 (706)
T ss_dssp             E-CC------CCCCEEEEEEECTTSSSEEEEEEE
T ss_pred             c-ccchhhhcCCCCcEEEEEEcCCCCEEEEEEEE
Confidence            3 3334444444 223333444566  5666554

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.80  E-value=5.5e-18  Score=175.08  Aligned_cols=296  Identities=9%  Similarity=0.042  Sum_probs=195.9

Q ss_pred             ccceeEEEeecceeEecCCCCceeccCcceeecCCC-CC-----cceeeecccccccccCCCCCCCCCCCCccccccccc
Q psy9182         146 KRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH-DD-----TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRM  219 (486)
Q Consensus       146 ~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~-dg-----~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (486)
                      ...+..++|+               +|+++|++++. |+     .|++||+.++.............  .+..+..    
T Consensus        36 ~~~~~~~~~S---------------pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~--~~~~~~~----   94 (741)
T 2ecf_A           36 GPTLMKPKVA---------------PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLP--GTETLSD----   94 (741)
T ss_dssp             CCCCEEEEEC---------------TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------
T ss_pred             CCCCCCceEe---------------cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhccc--ccccccc----
Confidence            3468889997               68888888887 87     89999987765433222111000  0000000    


Q ss_pred             CceeEEEEeccCC-CccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCC
Q psy9182         220 GKFLLQRINCRSE-NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDS  294 (486)
Q Consensus       220 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  294 (486)
                      .....+....... ......+++|||++|++++. +.|++||+.++.  ....+..|...+.+++|  ||++|+.++ ++
T Consensus        95 ~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~  172 (741)
T 2ecf_A           95 EEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GR  172 (741)
T ss_dssp             ------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TT
T ss_pred             hhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CC
Confidence            0000000000000 11345678999999999886 999999999873  34456667788888888  899998887 46


Q ss_pred             cEEEEECCCCcEEEEecccCcc----------------EEEEEEcCC--eEEEEeCCC----------------------
Q psy9182         295 TVRVWDVNTGEMVNTLIHHCEA----------------VLHLRFSNG--MMVTCSKDR----------------------  334 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~~~~----------------i~~~~~~~~--~l~~~~~dg----------------------  334 (486)
                      .|++||+.+++.......+...                +..+.|+++  .|++++.|+                      
T Consensus       173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~  252 (741)
T 2ecf_A          173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR  252 (741)
T ss_dssp             EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred             cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence            8999999988766544433332                367888865  677776655                      


Q ss_pred             -----------cEEEEECCC-CCceeeEEeeecCcccEEEEEe-CCCEEEEEeC-----CCcEEEEECCCceEEEEEcCC
Q psy9182         335 -----------SIAVWDMVS-PNEITLRRVLVGHRAAVNVVDF-DEKYIVSASG-----DRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       335 -----------~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~  396 (486)
                                 .|.+||+.+ ++.... .....+...+..+.| ||++|+.++.     +..|++||+.+++....+..+
T Consensus       253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~  331 (741)
T 2ecf_A          253 YPAAGDANVQVKLGVISPAEQAQTQWI-DLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET  331 (741)
T ss_dssp             CCBTTSCCCEEEEEEECSSTTCCCEEE-CCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE
T ss_pred             cCCCCCCCCeeEEEEEECCCCCceEEe-cCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC
Confidence                       788999987 664321 111135566666665 8888887653     567999999999887776655


Q ss_pred             cc----cEEEEEe--CCCEEEEEeCCCcEEEEECC-CCeeeEEecCcccCeEEE-Ee--cCCEEE-EEeCCC--cEEEEe
Q psy9182         397 KR----GIACLQY--RDRLVVSGSSDNTIRLWDIE-CGACLRVLEGHEELVRCI-RF--DAKRIV-SGAYDG--KIKVWN  463 (486)
Q Consensus       397 ~~----~v~~~~~--~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~-~~--~~~~l~-s~~~dg--~v~iwd  463 (486)
                      ..    .+..+.|  +|+++++++.||.++||.+. .++ ...+..|...|..+ .|  +++.|+ +++.|+  .+++|+
T Consensus       332 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  410 (741)
T 2ecf_A          332 SPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA  410 (741)
T ss_dssp             CSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred             CCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence            43    2334444  68889999999988888775 355 77888888888877 47  788765 455555  899999


Q ss_pred             CCC
Q psy9182         464 LVA  466 (486)
Q Consensus       464 l~~  466 (486)
                      +..
T Consensus       411 ~~~  413 (741)
T 2ecf_A          411 VPL  413 (741)
T ss_dssp             EET
T ss_pred             EEc
Confidence            865

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.80  E-value=8.3e-18  Score=156.21  Aligned_cols=257  Identities=11%  Similarity=0.082  Sum_probs=178.1

Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCC-ccceEEEEeCCCEEE-EEec
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN-SKGVYCLQYDDHKIV-SGLR  252 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~-~~~~  252 (486)
                      ++++++.++.|.+||+.+....                            ..+...... .....+++++++.++ ++..
T Consensus         3 ~~v~~~~~~~v~~~d~~~~~~~----------------------------~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~   54 (337)
T 1pby_B            3 YILAPARPDKLVVIDTEKMAVD----------------------------KVITIADAGPTPMVPMVAPGGRIAYATVNK   54 (337)
T ss_dssp             EEEEEETTTEEEEEETTTTEEE----------------------------EEEECTTCTTCCCCEEECTTSSEEEEEETT
T ss_pred             EEEEcCCCCeEEEEECCCCcEE----------------------------EEEEcCCCCCCccceEEcCCCCEEEEEeCC
Confidence            5788888999999997553321                            112111110 234567888997664 5556


Q ss_pred             CCeEEEEECCCceeeEEEcCCc-----ccEEEEEe--cCCEEEEEe------------CCCcEEEEECCCCcEEEEeccc
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHT-----GSVLCLQY--DERVIISGS------------SDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~--~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      ++.|.+||+.+++.+..+....     ..+.++.+  +++++++++            .++.|.+||+.+++.+..+.. 
T Consensus        55 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-  133 (337)
T 1pby_B           55 SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-  133 (337)
T ss_dssp             TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-
T ss_pred             CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-
Confidence            7899999999998887766321     13445555  788888886            579999999999988877765 


Q ss_pred             CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecC-cccEEEEEeCCCEEEEEeCCC-------------
Q psy9182         314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDFDEKYIVSASGDR-------------  377 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~~d~-------------  377 (486)
                      ...+..+.++++  .++++  ++.|.+||+.+++......  .+. ...+ .+..++..++..+..+             
T Consensus       134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~--~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~  208 (337)
T 1pby_B          134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKP--IQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKD  208 (337)
T ss_dssp             CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEEC--STTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTT
T ss_pred             CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeee--ccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccc
Confidence            345677788754  56666  6899999998876442211  111 1222 3344666554433222             


Q ss_pred             -----------cEEEEECCCceEE-EEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182         378 -----------TIKVWNTSSCEFV-RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI  443 (486)
Q Consensus       378 -----------~i~iwd~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  443 (486)
                                 .|.+||+.+++.. ..+..+...+..+.+  ++++++++  ++.|.+||+.+++.+..+..+ ..+.++
T Consensus       209 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~  285 (337)
T 1pby_B          209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSV  285 (337)
T ss_dssp             SCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEE
T ss_pred             cccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeE
Confidence                       4789999998764 223445556766777  47888887  799999999999988887644 457788


Q ss_pred             Ee--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         444 RF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       444 ~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +|  ++++|++++.++.|++||+.++.
T Consensus       286 ~~s~dg~~l~~~~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          286 NVSTDGSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             EECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred             EECCCCCEEEEEcCCCcEEEEECcCCc
Confidence            88  78899999999999999998764

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.79  E-value=1.1e-17  Score=167.69  Aligned_cols=265  Identities=11%  Similarity=0.036  Sum_probs=180.6

Q ss_pred             ccccccCCccCcceEEEeec-CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC--
Q psy9182         105 RDFISLLPNFDEKYIVSASG-DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH--  181 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~-dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~--  181 (486)
                      ..+.++.++|||++||+++. ||+++||++.+++..+....+...+..++|++               | ..+++++.  
T Consensus        22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~sp---------------d-~~l~~~~~~~   85 (582)
T 3o4h_A           22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGV---------------G-RVILVRDVSK   85 (582)
T ss_dssp             SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTC---------------S-EEEEEEECST
T ss_pred             cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCC---------------C-eEEEEeccCC
Confidence            35888899999999999887 99999999976665444444446888999974               3 33443332  


Q ss_pred             -CCcceeeeccc--ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE-EEEEecCCeEE
Q psy9182         182 -DDTILIWDFLN--YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK-IVSGLRDNTIK  257 (486)
Q Consensus       182 -dg~i~vWd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~dg~i~  257 (486)
                       +....+|.++.  .....                            .+  .......+.+++++++. +++.+.++.+.
T Consensus        86 g~~~~~l~~~~~~~~g~~~----------------------------~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~  135 (582)
T 3o4h_A           86 GAEQHALFKVNTSRPGEEQ----------------------------RL--EAVKPMRILSGVDTGEAVVFTGATEDRVA  135 (582)
T ss_dssp             TSCCEEEEEEETTSTTCCE----------------------------EC--TTSCSBEEEEEEECSSCEEEEEECSSCEE
T ss_pred             CCcceEEEEEeccCCCccc----------------------------cc--cCCCCceeeeeCCCCCeEEEEecCCCCce
Confidence             44556766533  11100                            00  11122336688998864 44444555566


Q ss_pred             EEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCC----CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEe
Q psy9182         258 VWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD----STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCS  331 (486)
Q Consensus       258 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~  331 (486)
                      +||+.+++.......+. .-..++.||+.+++++.+    +.|++||+.+++.. .+..+...+..++|+|+  .++++.
T Consensus       136 l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~  213 (582)
T 3o4h_A          136 LYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLE  213 (582)
T ss_dssp             EEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEE
T ss_pred             EEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEcc
Confidence            99999988766555433 333445599999988877    78999999988765 56777888899999975  777778


Q ss_pred             CCC--cEEEEECCCCCceeeEEeeecCcccEEEEE--------e--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCccc
Q psy9182         332 KDR--SIAVWDMVSPNEITLRRVLVGHRAAVNVVD--------F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG  399 (486)
Q Consensus       332 ~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--------~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  399 (486)
                      .++  .|++||+.+++..    ...++...+..+.        |  ||.++++++.++.+++|++  ++...   .....
T Consensus       214 ~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~  284 (582)
T 3o4h_A          214 TAREARLVTVDPRDGSVE----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGN  284 (582)
T ss_dssp             CSSCEEEEEECTTTCCEE----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSE
T ss_pred             CCCeeEEEEEcCCCCcEE----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCc
Confidence            888  8999999887643    3344544443333        4  8888999999999999999  66554   23355


Q ss_pred             EEEEEe-CCCEEEEEeCCCc---EEEEECCC
Q psy9182         400 IACLQY-RDRLVVSGSSDNT---IRLWDIEC  426 (486)
Q Consensus       400 v~~~~~-~~~~l~~~~~dg~---v~iwd~~~  426 (486)
                      +.++++ +++++++++.+..   +.+||..+
T Consensus       285 v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          285 HGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred             eEEEEecCCEEEEEEcCCCCCCeEEEEcCCC
Confidence            655555 5778888777744   66777653

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.79  E-value=5.6e-18  Score=174.39  Aligned_cols=313  Identities=11%  Similarity=0.043  Sum_probs=202.2

Q ss_pred             cccCCccCcceEEEeecCceeeecccccccceeeecCccc---ceeEEEeecceeEecCCCCceeccCcceeecCCC---
Q psy9182         108 ISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---  181 (486)
Q Consensus       108 ~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~---~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---  181 (486)
                      ....++|||++++++ .||.|++||+.+++....+.+|..   .+.+++|+               +|+++|++++.   
T Consensus        19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~S---------------pDg~~la~~~~~~~   82 (719)
T 1z68_A           19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLS---------------PDRQFVYLESDYSK   82 (719)
T ss_dssp             CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEEC---------------TTSSEEEEEEEEEE
T ss_pred             CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEEC---------------CCCCeEEEEecCce
Confidence            366889999766655 699999999999998877777654   38899997               57777777765   


Q ss_pred             ------CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         182 ------DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       182 ------dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                            ++.|++||+.++........                              .......+++|||+.|+.+. ++.
T Consensus        83 ~~~~s~~~~i~~~d~~~g~~~~~~~l------------------------------~~~~~~~~~SPDG~~la~~~-~~~  131 (719)
T 1z68_A           83 LWRYSYTATYYIYDLSNGEFVRGNEL------------------------------PRPIQYLCWSPVGSKLAYVY-QNN  131 (719)
T ss_dssp             CSSSCEEEEEEEEETTTTEECCSSCC------------------------------CSSBCCEEECSSTTCEEEEE-TTE
T ss_pred             eEEeecceEEEEEECCCCccccceec------------------------------CcccccceECCCCCEEEEEE-CCe
Confidence                  78999999876543110000                              01233467899999999885 789


Q ss_pred             EEEEECCCceeeEEE-cCCcccE-----------------EEEEe--cCCEEEEEeCCC---------------------
Q psy9182         256 IKVWDRVSLQCIKVL-TGHTGSV-----------------LCLQY--DERVIISGSSDS---------------------  294 (486)
Q Consensus       256 i~i~d~~~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg---------------------  294 (486)
                      |++||+.+++..... .++...+                 .++.|  ||+.|++++.|.                     
T Consensus       132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~  211 (719)
T 1z68_A          132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN  211 (719)
T ss_dssp             EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred             EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence            999999888765433 2222222                 25666  899999887652                     


Q ss_pred             -------------cEEEEECCCCcEE--EE------ecccCccEEEEEEcCC--eEEEEeCC----CcEEEEE----CCC
Q psy9182         295 -------------TVRVWDVNTGEMV--NT------LIHHCEAVLHLRFSNG--MMVTCSKD----RSIAVWD----MVS  343 (486)
Q Consensus       295 -------------~i~vwd~~~~~~~--~~------~~~~~~~i~~~~~~~~--~l~~~~~d----g~i~i~d----~~~  343 (486)
                                   .|++||+.+++..  ..      +..+...+..++|+++  .+++....    ..|.+||    +.+
T Consensus       212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~  291 (719)
T 1z68_A          212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT  291 (719)
T ss_dssp             EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred             ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence                         7889999887642  11      2346777899999876  33443322    2488899    766


Q ss_pred             CCceeeEE-eeecCcccEE-----EEEe--CCCEEEE--EeCCC--cEEEEECCCceEEEEEcCCcccEEEEE-eCCCEE
Q psy9182         344 PNEITLRR-VLVGHRAAVN-----VVDF--DEKYIVS--ASGDR--TIKVWNTSSCEFVRTLNGHKRGIACLQ-YRDRLV  410 (486)
Q Consensus       344 ~~~~~~~~-~~~~~~~~v~-----~~~~--~~~~l~~--~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~~l  410 (486)
                      ++...... ...++...+.     .+.|  ||+.++.  ...+|  .|.+||+.+++ ...+..+...+..+. ++++.|
T Consensus       292 g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~d~~~i  370 (719)
T 1z68_A          292 WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRVTQDSL  370 (719)
T ss_dssp             EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEECSSEE
T ss_pred             CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEEeCCEE
Confidence            54332221 0024444443     4445  7775543  44555  57778887766 455555555554322 277777


Q ss_pred             EEEeCC-----CcEEEEECCC--Ce-eeEEec----CcccCeEEEEe--cCCEEEE-EeCC--CcEEEEeCCCCC
Q psy9182         411 VSGSSD-----NTIRLWDIEC--GA-CLRVLE----GHEELVRCIRF--DAKRIVS-GAYD--GKIKVWNLVAAL  468 (486)
Q Consensus       411 ~~~~~d-----g~v~iwd~~~--~~-~~~~~~----~h~~~v~~~~~--~~~~l~s-~~~d--g~v~iwdl~~~~  468 (486)
                      +..+.+     +.+++|.+..  +. ....+.    +|...+..+.|  ++++++. ++.+  ..+.+||+.++.
T Consensus       371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~  445 (719)
T 1z68_A          371 FYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ  445 (719)
T ss_dssp             EEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred             EEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence            666654     7888998754  42 123333    26667888888  6777664 4433  468899886553

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.78  E-value=2.1e-16  Score=147.46  Aligned_cols=276  Identities=11%  Similarity=0.078  Sum_probs=177.1

Q ss_pred             ccCCccCcceEEEeecCceeeecccccccceeeecCcc-cceeEEEeecceeEecCCCCceeccCcce-eecCCCCCcce
Q psy9182         109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQ-IVSSSHDDTIL  186 (486)
Q Consensus       109 ~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~-l~s~s~dg~i~  186 (486)
                      .+++++++.++++++.++.|++||..+++.+..+..+. ..+..++|+               +++.. +++...++.|.
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s---------------~dg~~~~v~~~~~~~i~   68 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMA---------------PDNRTAYVLNNHYGDIY   68 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEEC---------------TTSSEEEEEETTTTEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEEC---------------CCCCEEEEEeCCCCcEE
Confidence            45678889999999999999999999999888887543 246677776               45543 45666789999


Q ss_pred             eeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccC-----CCccceEEEEeCCCEEEEEecC--------
Q psy9182         187 IWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS-----ENSKGVYCLQYDDHKIVSGLRD--------  253 (486)
Q Consensus       187 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~d--------  253 (486)
                      +||+.+.....                            .+....     ......++++++++++++++.+        
T Consensus        69 ~~d~~t~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~  120 (349)
T 1jmx_B           69 GIDLDTCKNTF----------------------------HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY  120 (349)
T ss_dssp             EEETTTTEEEE----------------------------EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred             EEeCCCCcEEE----------------------------EEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence            99986543221                            111100     1113446788899999998865        


Q ss_pred             ----CeEEEEECCCce---eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCc---------
Q psy9182         254 ----NTIKVWDRVSLQ---CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE---------  315 (486)
Q Consensus       254 ----g~i~i~d~~~~~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---------  315 (486)
                          +.|.+||+.+++   .+..+..+ ..+.++++  +++ +++++  +.|.+||+.+++.+..+..+..         
T Consensus       121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  196 (349)
T 1jmx_B          121 VVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPD  196 (349)
T ss_dssp             EECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCB
T ss_pred             ccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcc
Confidence                899999998843   33444433 35666666  777 55554  3499999999988877654320         


Q ss_pred             ---------------cEEEEEEcCCe---EEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEE--e-CCCEEEEEe
Q psy9182         316 ---------------AVLHLRFSNGM---MVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVD--F-DEKYIVSAS  374 (486)
Q Consensus       316 ---------------~i~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~  374 (486)
                                     ....+.+.++-   .........+..+|..+++.... . ...+...+..+.  . ++++++++ 
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~sp~dg~~l~~~-  273 (349)
T 1jmx_B          197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ-E-FADLTELYFTGLRSPKDPNQIYGV-  273 (349)
T ss_dssp             CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE-E-EEECSSCEEEEEECSSCTTEEEEE-
T ss_pred             ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEec-c-cccCCCcceeeEecCCCCCEEEEE-
Confidence                           12223333110   00000001122244444332111 1 111233344444  4 77888888 


Q ss_pred             CCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182         375 GDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                       ++.|.+||+.+++.+..+.... .+.++.+  ++++|++++.++.|.+||+++++.+..+...
T Consensus       274 -~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          274 -LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             -ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             -cCeEEEEECccCeEEEEEcCCC-CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence             7899999999999888876433 3445665  5778888888999999999999988887654

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.76  E-value=9.6e-16  Score=147.04  Aligned_cols=203  Identities=13%  Similarity=0.084  Sum_probs=142.6

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccc----------eee-----ecCcccceeEEEeecceeEecCCCCceec
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEF----------VRT-----LNGHKRGIACLQYRDRLVVSGSSDNTIRY  170 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~----------~~~-----l~~h~~~V~~~~~~~~~~~~~~~d~~i~~  170 (486)
                      .+..+++++++.++++++.|| ++||+......          +..     ...|...|.+++|+               
T Consensus        38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s---------------  101 (434)
T 2oit_A           38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALS---------------  101 (434)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEEC---------------
T ss_pred             CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEc---------------
Confidence            466778888999999999988 88887542111          111     11345679999997               


Q ss_pred             cCcceee----cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEE--EeC-
Q psy9182         171 RDEFQIV----SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL--QYD-  243 (486)
Q Consensus       171 ~~~~~l~----s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~-  243 (486)
                      +++.+|+    +++.|+.|++||+.+.......                    ....+..+....+|...+.++  +|+ 
T Consensus       102 pdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~--------------------~~~~~~~~~~~~~h~~~V~~v~~~p~~  161 (434)
T 2oit_A          102 CDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ--------------------QKRPFAYHKLLKDAGGMVIDMKWNPTV  161 (434)
T ss_dssp             TTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS--------------------SCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred             CCCCEEEEEEeccCCCceEEEEEccccccCCcC--------------------CcceeeeeeccCCCCCceEEEEECCCC
Confidence            5777788    8999999999998664210000                    000011122223345555554  455 


Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc-------C
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH-------C  314 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------~  314 (486)
                      +.+|++++.||+|++||++++.......+|...|.+++|  ++++|++|+.||.|++||++ ++....+..+       .
T Consensus       162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~  240 (434)
T 2oit_A          162 PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHP  240 (434)
T ss_dssp             TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSC
T ss_pred             CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCc
Confidence            679999999999999999998877777789999999999  78999999999999999998 6666665433       2


Q ss_pred             ccEEEEEEcCC-eEE--EEeCCC------cEEEEECCCCC
Q psy9182         315 EAVLHLRFSNG-MMV--TCSKDR------SIAVWDMVSPN  345 (486)
Q Consensus       315 ~~i~~~~~~~~-~l~--~~~~dg------~i~i~d~~~~~  345 (486)
                      ..+.++.|+++ .++  ....+|      .+++|++++.+
T Consensus       241 ~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~  280 (434)
T 2oit_A          241 VRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE  280 (434)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred             eeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence            37899999866 333  234443      38999998653

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.76  E-value=1.5e-15  Score=142.01  Aligned_cols=227  Identities=12%  Similarity=0.107  Sum_probs=166.2

Q ss_pred             ceEEEEeCCCEEEEEec-------CCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCc
Q psy9182         236 GVYCLQYDDHKIVSGLR-------DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVII-SGSSDSTVRVWDVNTGE  305 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~  305 (486)
                      .-.+++++++++++++.       ++.|.+||..+++.+..+.... .+..+.+  +++.++ +...++.|.+||..+++
T Consensus        44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~  122 (353)
T 3vgz_A           44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE  122 (353)
T ss_dssp             EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred             cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEeCCCCe
Confidence            34678889998888774       5689999999999888776432 3444444  777555 44557999999999999


Q ss_pred             EEEEecccCcc---------EEEEEEcCC--eEEEEe--CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE
Q psy9182         306 MVNTLIHHCEA---------VLHLRFSNG--MMVTCS--KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI  370 (486)
Q Consensus       306 ~~~~~~~~~~~---------i~~~~~~~~--~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l  370 (486)
                      .+..+..+...         +..+.++++  .++++.  .++.|.+||+.+++...   ....+...+..+.+  +++++
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l  199 (353)
T 3vgz_A          123 VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT---AIQNTGKMSTGLALDSEGKRL  199 (353)
T ss_dssp             EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE---EECCCCTTCCCCEEETTTTEE
T ss_pred             eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE---EecCCCCccceEEECCCCCEE
Confidence            88887654322         678888754  566555  47889999998876543   22223333444444  89999


Q ss_pred             EEEeCCCcEEEEECCCceEEEEEcC----CcccEEEEEe--CCCEEEEEeC-CCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182         371 VSASGDRTIKVWNTSSCEFVRTLNG----HKRGIACLQY--RDRLVVSGSS-DNTIRLWDIECGACLRVLEGHEELVRCI  443 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~  443 (486)
                      ++++.++.|.+||..+++.+..+..    +...+..+.+  +++++++++. ++.|.+||+.+++.+..+.....  ..+
T Consensus       200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~  277 (353)
T 3vgz_A          200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAV  277 (353)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCE
T ss_pred             EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceE
Confidence            9999999999999999998887764    4445665665  5777666664 59999999999998888775443  456


Q ss_pred             Ee--cCCEEEEEe-CCCcEEEEeCCCCC
Q psy9182         444 RF--DAKRIVSGA-YDGKIKVWNLVAAL  468 (486)
Q Consensus       444 ~~--~~~~l~s~~-~dg~v~iwdl~~~~  468 (486)
                      +|  +++++++++ .++.|.+||+.++.
T Consensus       278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~  305 (353)
T 3vgz_A          278 LFNPARNEAYVTHRQAGKVSVIDAKSYK  305 (353)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred             EECCCCCEEEEEECCCCeEEEEECCCCe
Confidence            66  888666555 68999999998654

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.76  E-value=3.5e-15  Score=140.06  Aligned_cols=290  Identities=11%  Similarity=0.152  Sum_probs=176.0

Q ss_pred             ccCcceEEEee----cCceeeeccc--ccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC----
Q psy9182         113 NFDEKYIVSAS----GDRTIKVWNT--SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD----  182 (486)
Q Consensus       113 s~~~~~l~tg~----~dg~v~iWd~--~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d----  182 (486)
                      .+...+++.|+    .++.|.+|++  .++++......+......++|+               +|+++|++++.+    
T Consensus        10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~s---------------pdg~~l~~~~~~~~~~   74 (361)
T 3scy_A           10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPS---------------ADGKFVYSVNEFSKDQ   74 (361)
T ss_dssp             GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEEC---------------TTSSEEEEEECCSSTT
T ss_pred             CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEEC---------------CCCCEEEEEEccCCCC
Confidence            34455666764    4678999976  4555433222266677778887               566667766664    


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEEC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDR  261 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~  261 (486)
                      +.+.+|+++...                         +  .+..+............++++++++++++ .++.|.+|++
T Consensus        75 ~~v~~~~~~~~~-------------------------g--~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~  127 (361)
T 3scy_A           75 AAVSAFAFDKEK-------------------------G--TLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPI  127 (361)
T ss_dssp             CEEEEEEEETTT-------------------------T--EEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEB
T ss_pred             CcEEEEEEeCCC-------------------------C--cEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEe
Confidence            799999985421                         0  01111111112223344445888877776 5789999998


Q ss_pred             CCceeeEE----E--cC--------CcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCc-------EE------EEec
Q psy9182         262 VSLQCIKV----L--TG--------HTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGE-------MV------NTLI  311 (486)
Q Consensus       262 ~~~~~~~~----~--~~--------~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~-------~~------~~~~  311 (486)
                      .....+..    +  .+        +...+.++.+  +++++++++ .++.|.+|++....       ..      ....
T Consensus       128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~  207 (361)
T 3scy_A          128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV  207 (361)
T ss_dssp             CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred             CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence            75432211    1  11        1223456666  788666555 47899999887533       11      1122


Q ss_pred             ccCccEEEEEEcCC--eEEEEe-CCCcEEEEECCCCCceeeE--EeeecCcccEEEEEe--CCCEEEEEeCC--CcEEEE
Q psy9182         312 HHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNEITLR--RVLVGHRAAVNVVDF--DEKYIVSASGD--RTIKVW  382 (486)
Q Consensus       312 ~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~d--~~i~iw  382 (486)
                      ........++|+++  .+++++ .++.|.+||+.++......  .....+......+.+  +|++|+++..+  +.|.+|
T Consensus       208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~  287 (361)
T 3scy_A          208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF  287 (361)
T ss_dssp             CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred             CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence            33456788999875  566666 6899999999865432111  112223334566666  88988776654  899999


Q ss_pred             ECC--Cce--EEEEEcCCcccEEEEEe--CCCEEEEEe-CCCcEEEEE--CCCCeeeEEe-cCcccCeEEEEe
Q psy9182         383 NTS--SCE--FVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWD--IECGACLRVL-EGHEELVRCIRF  445 (486)
Q Consensus       383 d~~--~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~v~iwd--~~~~~~~~~~-~~h~~~v~~~~~  445 (486)
                      ++.  +++  .+..+.. ...+..+++  ++++|++++ .++.|.+|+  .++++..... ..+...+.|+.|
T Consensus       288 ~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~  359 (361)
T 3scy_A          288 KVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF  359 (361)
T ss_dssp             EECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred             EEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence            985  444  4445554 445556666  588888887 678999964  4567655443 224456888887

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.75  E-value=2.6e-17  Score=157.93  Aligned_cols=208  Identities=12%  Similarity=0.143  Sum_probs=148.1

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCC----------cEEEEe-----cccCccEE
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTG----------EMVNTL-----IHHCEAVL  318 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~----------~~~~~~-----~~~~~~i~  318 (486)
                      +.+++|+....     +........+++.++.++++++.+| +++|+....          ..+...     ..+...|.
T Consensus        23 ~~vri~~~~~~-----~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   96 (434)
T 2oit_A           23 KKVRIFDSPEE-----LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH   96 (434)
T ss_dssp             CEEECSCCCSS-----CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred             eeEEecCCccc-----cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence            46777764321     1112223344444678888888887 888764210          011111     12456799


Q ss_pred             EEEEcCC--eEE----EEeCCCcEEEEECCCC--------CceeeEEeeecCcccEEEEEe--C-CCEEEEEeCCCcEEE
Q psy9182         319 HLRFSNG--MMV----TCSKDRSIAVWDMVSP--------NEITLRRVLVGHRAAVNVVDF--D-EKYIVSASGDRTIKV  381 (486)
Q Consensus       319 ~~~~~~~--~l~----~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~d~~i~i  381 (486)
                      +++|+++  +++    +++.|+.|++||+.+.        +.........+|...|.++.|  + +.+|++++.||+|++
T Consensus        97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i  176 (434)
T 2oit_A           97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV  176 (434)
T ss_dssp             EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred             EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence            9999864  677    6778999999998754        222334556779999999999  3 679999999999999


Q ss_pred             EECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCc-------ccCeEEEEe--cCCEE
Q psy9182         382 WNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGH-------EELVRCIRF--DAKRI  450 (486)
Q Consensus       382 wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~--~~~~l  450 (486)
                      ||++++..+....+|...+.+++|+  +++|++|+.||.|++||++ ++....+..|       ...|.+++|  ++.++
T Consensus       177 wD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l  255 (434)
T 2oit_A          177 LQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA  255 (434)
T ss_dssp             EEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred             EEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence            9999998777777899999999995  8899999999999999998 6666666544       237899999  44444


Q ss_pred             EE-EeCCCc------EEEEeCCCCC
Q psy9182         451 VS-GAYDGK------IKVWNLVAAL  468 (486)
Q Consensus       451 ~s-~~~dg~------v~iwdl~~~~  468 (486)
                      ++ ++.||.      +++|++....
T Consensus       256 ~~~~~~dg~~~~~~~v~i~~l~~~~  280 (434)
T 2oit_A          256 IVYAAADGTLETSPDVVMALLPKKE  280 (434)
T ss_dssp             EEEEETTCCSSSCCEEEEEECCCTT
T ss_pred             EEEccCCCccCCCCceEEEEeccCC
Confidence            33 444543      8999998653

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.75  E-value=2.5e-15  Score=140.23  Aligned_cols=231  Identities=12%  Similarity=0.186  Sum_probs=152.5

Q ss_pred             cceEEEEeCCCEEEEEec---CCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECC-CCc
Q psy9182         235 KGVYCLQYDDHKIVSGLR---DNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVN-TGE  305 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~-~~~  305 (486)
                      ...++++++++ +++++.   ++.|.+||+.+++  .+..+..+...+..+++  ++++|++++ .++.|.+||+. ++.
T Consensus        42 p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~  120 (347)
T 3hfq_A           42 PTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA  120 (347)
T ss_dssp             CCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC
T ss_pred             cceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC
Confidence            34577889998 555544   6899999997765  34444445556666665  788888887 67999999996 333


Q ss_pred             --EEEEeccc---------CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe--CCCE
Q psy9182         306 --MVNTLIHH---------CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       306 --~~~~~~~~---------~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~  369 (486)
                        .+..+...         ...+.+++++++  .+++...++.|.+||+............ .........+.|  +|++
T Consensus       121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~  200 (347)
T 3hfq_A          121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY  200 (347)
T ss_dssp             EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE
T ss_pred             eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE
Confidence              23333221         124778899854  5555566889999999833222222221 222234555666  7886


Q ss_pred             EEE-EeCCCcEEEEECCC--ceE--EEEEcCCc------ccEEEEEe--CCCEE-EEEeCCCcEEEEECC---CCeeeEE
Q psy9182         370 IVS-ASGDRTIKVWNTSS--CEF--VRTLNGHK------RGIACLQY--RDRLV-VSGSSDNTIRLWDIE---CGACLRV  432 (486)
Q Consensus       370 l~~-~~~d~~i~iwd~~~--~~~--~~~~~~~~------~~v~~~~~--~~~~l-~~~~~dg~v~iwd~~---~~~~~~~  432 (486)
                      +++ ...++.|.+|++..  ++.  +..+....      ..+..+.+  +|++| ++...++.|.+|++.   +.+.+..
T Consensus       201 l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~  280 (347)
T 3hfq_A          201 AFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ  280 (347)
T ss_dssp             EEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred             EEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence            665 45678999999874  543  33333322      23666666  57776 556678999999997   2355666


Q ss_pred             ecCcccCeEEEEe--cCCEEEEEeCC-CcEEEEeCCC
Q psy9182         433 LEGHEELVRCIRF--DAKRIVSGAYD-GKIKVWNLVA  466 (486)
Q Consensus       433 ~~~h~~~v~~~~~--~~~~l~s~~~d-g~v~iwdl~~  466 (486)
                      +..+...+..++|  |+++|++++.+ +.|.+|+++.
T Consensus       281 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~  317 (347)
T 3hfq_A          281 ISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL  317 (347)
T ss_dssp             EECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             EecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence            6666677889999  88888888765 8999996653

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.75  E-value=5.9e-15  Score=137.74  Aligned_cols=264  Identities=14%  Similarity=0.178  Sum_probs=164.9

Q ss_pred             cCceeeecccc--ccccee-eecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC---CCcceeeecccccccc
Q psy9182         124 GDRTIKVWNTS--SCEFVR-TLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---DDTILIWDFLNYSETP  197 (486)
Q Consensus       124 ~dg~v~iWd~~--~~~~~~-~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---dg~i~vWd~~~~~~~~  197 (486)
                      .++.|.+|++.  +++... ....+......++|+               +|++ +++++.   ++.|.+|++.++... 
T Consensus        14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~s---------------pdg~-l~~~~~~~~~~~v~~~~~~~g~~~-   76 (347)
T 3hfq_A           14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALS---------------AKDC-LYSVDKEDDEGGIAAWQIDGQTAH-   76 (347)
T ss_dssp             SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEEC---------------TTCE-EEEEEEETTEEEEEEEEEETTEEE-
T ss_pred             CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEc---------------cCCe-EEEEEecCCCceEEEEEecCCcEE-
Confidence            35667777764  455433 233445567778886               4565 444433   689999998543211 


Q ss_pred             cCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEECC---CceeeEEEcCC
Q psy9182         198 IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDRV---SLQCIKVLTGH  273 (486)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~---~~~~~~~~~~~  273 (486)
                                               .+..+.. ......-+++++++++|++++ .++.|.+|++.   ..+.+..+...
T Consensus        77 -------------------------~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~  130 (347)
T 3hfq_A           77 -------------------------KLNTVVA-PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHS  130 (347)
T ss_dssp             -------------------------EEEEEEE-ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECC
T ss_pred             -------------------------Eeeeeec-CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecC
Confidence                                     1111111 123344577899999888887 77899999986   23333333321


Q ss_pred             ---------cccEEEEEe--cCCEEEEEeCCCcEEEEECC-CCcEEE--Eecc-cCccEEEEEEcCC--eEEE-EeCCCc
Q psy9182         274 ---------TGSVLCLQY--DERVIISGSSDSTVRVWDVN-TGEMVN--TLIH-HCEAVLHLRFSNG--MMVT-CSKDRS  335 (486)
Q Consensus       274 ---------~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~~~--~~~~-~~~~i~~~~~~~~--~l~~-~~~dg~  335 (486)
                               ...+.++++  +++++++...++.|.+||+. +++...  .+.. .......++|+++  .+++ ...++.
T Consensus       131 ~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~  210 (347)
T 3hfq_A          131 GHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ  210 (347)
T ss_dssp             CCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred             CCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE
Confidence                     123666777  77866666678899999998 554432  2222 2335778899865  4554 567889


Q ss_pred             EEEEECCCC-CceeeEEeeecCc------ccEEEEEe--CCCEE-EEEeCCCcEEEEECC---CceEEEEEcCCcccEEE
Q psy9182         336 IAVWDMVSP-NEITLRRVLVGHR------AAVNVVDF--DEKYI-VSASGDRTIKVWNTS---SCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       336 i~i~d~~~~-~~~~~~~~~~~~~------~~v~~~~~--~~~~l-~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~  402 (486)
                      |.+|++... .............      ..+..+.+  +|++| ++...++.|.+||+.   ..+.+..+..+...+..
T Consensus       211 v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~  290 (347)
T 3hfq_A          211 IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRD  290 (347)
T ss_dssp             EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCE
T ss_pred             EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCe
Confidence            999998752 2222222222221      34666766  78877 455668999999987   33556666666666667


Q ss_pred             EEe--CCCEEEEEeC-CCcEEEE--ECCCCeee
Q psy9182         403 LQY--RDRLVVSGSS-DNTIRLW--DIECGACL  430 (486)
Q Consensus       403 ~~~--~~~~l~~~~~-dg~v~iw--d~~~~~~~  430 (486)
                      +++  ++++|++++. ++.|.+|  |.++|+..
T Consensus       291 ~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          291 FDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             EEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence            777  4788888775 4899999  55566654

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.74  E-value=1.2e-14  Score=136.42  Aligned_cols=233  Identities=8%  Similarity=0.092  Sum_probs=155.9

Q ss_pred             CccceEEEEeCCCEEEEEecC----CeEEEEECCC--ce--eeEEEcCCcccEEEEEecCCEEEEEe-CCCcEEEEECCC
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRD----NTIKVWDRVS--LQ--CIKVLTGHTGSVLCLQYDERVIISGS-SDSTVRVWDVNT  303 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~--~~--~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~  303 (486)
                      ....-+++++++++|++++.+    +.|.+|++..  ++  .+.....+......++++++++++++ .++.|.+|++..
T Consensus        50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~  129 (361)
T 3scy_A           50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQ  129 (361)
T ss_dssp             SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCT
T ss_pred             CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCC
Confidence            344457789999999998876    7999998765  44  33444445556777777888877776 578999999975


Q ss_pred             CcEEEEe------cc--------cCccEEEEEEcCC--eEEEEe-CCCcEEEEECCCCCc------eee----EEeeecC
Q psy9182         304 GEMVNTL------IH--------HCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNE------ITL----RRVLVGH  356 (486)
Q Consensus       304 ~~~~~~~------~~--------~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~------~~~----~~~~~~~  356 (486)
                      ...+..+      .+        +...+.+++|+++  .++++. .++.|.+|++.....      +..    .......
T Consensus       130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~  209 (361)
T 3scy_A          130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP  209 (361)
T ss_dssp             TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT
T ss_pred             CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC
Confidence            4322111      11        1223577888865  455544 588999999876542      211    1222233


Q ss_pred             cccEEEEEe--CCCEEEEEe-CCCcEEEEECCCceE--EEEEc---CCcccEEEEEe--CCCEEEEEeCC--CcEEEEEC
Q psy9182         357 RAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSCEF--VRTLN---GHKRGIACLQY--RDRLVVSGSSD--NTIRLWDI  424 (486)
Q Consensus       357 ~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~--~~~~l~~~~~d--g~v~iwd~  424 (486)
                      ......+.|  +++++++++ .++.|.+||+.+++.  +..+.   .+......+.+  ++++|+++..+  +.|.+|++
T Consensus       210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~  289 (361)
T 3scy_A          210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV  289 (361)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred             CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence            445566777  788887777 689999999987754  33333   23344566666  58888776654  89999999


Q ss_pred             C--CCe--eeEEecCcccCeEEEEe--cCCEEEEEe-CCCcEEEEeCCC
Q psy9182         425 E--CGA--CLRVLEGHEELVRCIRF--DAKRIVSGA-YDGKIKVWNLVA  466 (486)
Q Consensus       425 ~--~~~--~~~~~~~h~~~v~~~~~--~~~~l~s~~-~dg~v~iwdl~~  466 (486)
                      .  +++  .+..+.. ...+.+++|  ||++|++++ .++.|.+|+++.
T Consensus       290 ~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~  337 (361)
T 3scy_A          290 DETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ  337 (361)
T ss_dssp             CTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred             cCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence            5  454  4444444 456788899  888888887 678999976653

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.74  E-value=4.6e-16  Score=145.17  Aligned_cols=222  Identities=12%  Similarity=0.047  Sum_probs=159.2

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCc-ccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCcEEEEecccC-
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT-GSVLCLQY--DERVII-SGSSDSTVRVWDVNTGEMVNTLIHHC-  314 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~-  314 (486)
                      +++++.++++++.++.|.+||..+++.+..+..+. ..+..+.+  +++.++ ++..++.|.+||+.+++.+..+.... 
T Consensus         7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~   86 (349)
T 1jmx_B            7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV   86 (349)
T ss_dssp             CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred             ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence            34567788999999999999999999988887543 13455555  777654 55568999999999998887765332 


Q ss_pred             -----ccEEEEEEcCC--eEEEEeCC------------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE
Q psy9182         315 -----EAVLHLRFSNG--MMVTCSKD------------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA  373 (486)
Q Consensus       315 -----~~i~~~~~~~~--~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~  373 (486)
                           ..+..++++++  .+++++.+            +.|.+||+.+++.......... ...+.++.+  +++ ++++
T Consensus        87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~  164 (349)
T 1jmx_B           87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVA  164 (349)
T ss_dssp             TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEE
T ss_pred             cccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEc
Confidence                 23567788764  77777754            8999999987543332222222 234566666  777 5555


Q ss_pred             eCCCcEEEEECCCceEEEEEcCCc-------------------------c------------------------------
Q psy9182         374 SGDRTIKVWNTSSCEFVRTLNGHK-------------------------R------------------------------  398 (486)
Q Consensus       374 ~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~------------------------------  398 (486)
                      +  +.|.+||+.+++.+..+..+.                         .                              
T Consensus       165 ~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  242 (349)
T 1jmx_B          165 G--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT  242 (349)
T ss_dssp             S--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred             c--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccC
Confidence            4  349999999998877765432                         0                              


Q ss_pred             -------------cEEEE--Ee-CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEE
Q psy9182         399 -------------GIACL--QY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIK  460 (486)
Q Consensus       399 -------------~v~~~--~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~  460 (486)
                                   .+..+  +. ++++++++  ++.|.+||+.+++.+..+... ..+.+++|  ++++|++++.++.|+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~  319 (349)
T 1jmx_B          243 GKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA  319 (349)
T ss_dssp             CCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred             CcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence                         11111  24 67788877  889999999999988877643 34678888  788888888899999


Q ss_pred             EEeCCCCC
Q psy9182         461 VWNLVAAL  468 (486)
Q Consensus       461 iwdl~~~~  468 (486)
                      +||+.+..
T Consensus       320 v~d~~~~~  327 (349)
T 1jmx_B          320 VFNPDTLE  327 (349)
T ss_dssp             EEETTTTE
T ss_pred             EEeccccc
Confidence            99998654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.73  E-value=2.2e-16  Score=162.69  Aligned_cols=266  Identities=8%  Similarity=0.032  Sum_probs=174.5

Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCC--CccceEEEEeCCCEEE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSE--NSKGVYCLQYDDHKIV  248 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~l~  248 (486)
                      +|+.++++ +.||+|++||+.++.......                            ....  ......+++|||++|+
T Consensus        26 pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~----------------------------~~~~~~~~v~~~~~SpDg~~l~   76 (723)
T 1xfd_A           26 SDTEFIYR-EQKGTVRLWNVETNTSTVLIE----------------------------GKKIESLRAIRYEISPDREYAL   76 (723)
T ss_dssp             SSSCBCCC-CSSSCEEEBCGGGCCCEEEEC----------------------------TTTTTTTTCSEEEECTTSSEEE
T ss_pred             CCCcEEEE-eCCCCEEEEECCCCcEEEEec----------------------------cccccccccceEEECCCCCEEE
Confidence            56665655 789999999987654322111                            1111  1245577899999999


Q ss_pred             EEecC---------CeEEEEECCCceeeEEEc---CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         249 SGLRD---------NTIKVWDRVSLQCIKVLT---GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       249 ~~~~d---------g~i~i~d~~~~~~~~~~~---~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      +++.+         +.+.+||+.+++. ..+.   +|...+..++|  ||+.|+.++. +.|++||+.+++.......+.
T Consensus        77 ~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~  154 (723)
T 1xfd_A           77 FSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGK  154 (723)
T ss_dssp             EEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCB
T ss_pred             EEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCC
Confidence            99774         7888999998876 3333   33334666666  8999998876 789999999888766555433


Q ss_pred             ccE------------------EEEEEcCC--eEEEEeCCC----------------------------------cEEEEE
Q psy9182         315 EAV------------------LHLRFSNG--MMVTCSKDR----------------------------------SIAVWD  340 (486)
Q Consensus       315 ~~i------------------~~~~~~~~--~l~~~~~dg----------------------------------~i~i~d  340 (486)
                      ..+                  .++.|+|+  .|++++.++                                  .|++||
T Consensus       155 ~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d  234 (723)
T 1xfd_A          155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIG  234 (723)
T ss_dssp             TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEE
T ss_pred             CCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEE
Confidence            322                  68999875  677766442                                  799999


Q ss_pred             CCCCCceeeEEe---eecCcccEEEEEe--CCCEEEEEeC----CCcEEEEECCCceEEEEEcCC-cccE----EEEEe-
Q psy9182         341 MVSPNEITLRRV---LVGHRAAVNVVDF--DEKYIVSASG----DRTIKVWNTSSCEFVRTLNGH-KRGI----ACLQY-  405 (486)
Q Consensus       341 ~~~~~~~~~~~~---~~~~~~~v~~~~~--~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~-~~~v----~~~~~-  405 (486)
                      +.+++.......   ...+...+..+.|  ||+++++...    +..|++||+.+++....+..+ ...+    ..+.| 
T Consensus       235 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~s  314 (723)
T 1xfd_A          235 LNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFS  314 (723)
T ss_dssp             SSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEEC
T ss_pred             CCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEc
Confidence            988764221110   1113567777888  7888876643    357999999999877665432 2222    13444 


Q ss_pred             -CCCEEEE--EeCCC------cEEEEE-CCCCe--eeEEecCcccCeEE-EEe--cCCEEEEEeCC---CcEEEEeCCCC
Q psy9182         406 -RDRLVVS--GSSDN------TIRLWD-IECGA--CLRVLEGHEELVRC-IRF--DAKRIVSGAYD---GKIKVWNLVAA  467 (486)
Q Consensus       406 -~~~~l~~--~~~dg------~v~iwd-~~~~~--~~~~~~~h~~~v~~-~~~--~~~~l~s~~~d---g~v~iwdl~~~  467 (486)
                       +|+.|+.  +..++      .|.+|| ..+++  +...+..+...+.. ++|  |++.|+..+.+   +.+++|+++..
T Consensus       315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~  394 (723)
T 1xfd_A          315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV  394 (723)
T ss_dssp             TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred             CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence             6776654  45677      577777 34444  14555544444544 577  89998766655   78999998754

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.73  E-value=1e-14  Score=136.44  Aligned_cols=284  Identities=14%  Similarity=0.136  Sum_probs=188.7

Q ss_pred             ccCcceEEEee------cCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC------
Q psy9182         113 NFDEKYIVSAS------GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS------  180 (486)
Q Consensus       113 s~~~~~l~tg~------~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s------  180 (486)
                      .++++++....      .|+.|.+||..+++.+.++..+..+  .++|+               +|+++++++.      
T Consensus        12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~s---------------pdg~~lyv~~~~~~~~   74 (361)
T 2oiz_A           12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVS---------------NDGKKIYTMTTYHERI   74 (361)
T ss_dssp             SCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEEC---------------TTSSEEEEEEEEETTS
T ss_pred             CCCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEEC---------------CCCCEEEEEEeccccc
Confidence            35677666643      4789999999999999888877655  77886               4666665553      


Q ss_pred             ----CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc-----CCCccceEEEEeCCCEEEEEe
Q psy9182         181 ----HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR-----SENSKGVYCLQYDDHKIVSGL  251 (486)
Q Consensus       181 ----~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~l~~~~  251 (486)
                          .++.|.+||..+.+..                            ..+...     ......-+++++++++|+++.
T Consensus        75 ~~g~~~~~v~v~d~~t~~~~----------------------------~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n  126 (361)
T 2oiz_A           75 TRGKRSDVVEVWDADKLTFE----------------------------KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN  126 (361)
T ss_dssp             SSSCEEEEEEEEETTTCCEE----------------------------EEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred             ccCCCCCEEEEEECcCCcEE----------------------------EEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence                4678999997543321                            111111     112344567899999999887


Q ss_pred             c--CCeEEEEECCCceeeEE-EcCCcccEEEEEec-CCEEEEEeCCCcEEEEECCC-CcEEEEe------cccCccEE-E
Q psy9182         252 R--DNTIKVWDRVSLQCIKV-LTGHTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT-GEMVNTL------IHHCEAVL-H  319 (486)
Q Consensus       252 ~--dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~-~~~~~~~------~~~~~~i~-~  319 (486)
                      .  ++.|.+||+.+++.+.. +......-..+..+ +..+++.+.||.+.+|+... ++.....      .....++. .
T Consensus       127 ~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~  206 (361)
T 2oiz_A          127 ASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIA  206 (361)
T ss_dssp             ESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSC
T ss_pred             CCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEE
Confidence            4  57999999999998887 55322111122223 36788889999999999865 5544221      11111110 1


Q ss_pred             EEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeee------------cCcccEEEEEeCCCEEEEEeC-----------C
Q psy9182         320 LRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV------------GHRAAVNVVDFDEKYIVSASG-----------D  376 (486)
Q Consensus       320 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~l~~~~~-----------d  376 (486)
                      ....+..++..+.++.|.++|+........ ....            ........+..+++.++++..           .
T Consensus       207 ~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~-~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~  285 (361)
T 2oiz_A          207 PALDKDKAHFVSYYGNVYSADFSGDEVKVD-GPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA  285 (361)
T ss_dssp             CEECSSEEEEEBTTSEEEEEECSSSSCEEE-EEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred             ecccCCEEEEEeCCCeEEEEEecCCCceec-ccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence            112234666677889999999876542211 1110            011112355567777776643           3


Q ss_pred             CcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCC--eeeEEecCcccCeEEEEe
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~h~~~v~~~~~  445 (486)
                      +.|.+||+.+++.+.++..+.  ...+.+  ++++|++++. +.|.+||..++  +.+..+..+......+++
T Consensus       286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~  355 (361)
T 2oiz_A          286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQF  355 (361)
T ss_dssp             SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred             ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence            489999999999999998777  555555  6889988886 99999999999  999998767777777777

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.72  E-value=9.2e-16  Score=139.34  Aligned_cols=212  Identities=9%  Similarity=0.105  Sum_probs=156.7

Q ss_pred             EecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc-CccEEEEEEcCC
Q psy9182         250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH-CEAVLHLRFSNG  325 (486)
Q Consensus       250 ~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~-~~~i~~~~~~~~  325 (486)
                      ++.++.|++||+.+++... +..|...+.+++|  +++++++++ ++.|++||+.+ ++.......+ ...+.++.|+++
T Consensus        18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd   95 (297)
T 2ojh_A           18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD   95 (297)
T ss_dssp             CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred             CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence            4578899999999988764 4447888999988  788888876 78999999998 8776665554 366788889865


Q ss_pred             --eEEEEe--CCCcEEEE--ECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCCcEEEEECCC-ceEEEEEcC
Q psy9182         326 --MMVTCS--KDRSIAVW--DMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDRTIKVWNTSS-CEFVRTLNG  395 (486)
Q Consensus       326 --~l~~~~--~dg~i~i~--d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~~i~iwd~~~-~~~~~~~~~  395 (486)
                        .+++++  .++...+|  ++.++..    ..+..+ ..+..+.|  ++++++ +++.++.+++|+++. ......+..
T Consensus        96 g~~l~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~  170 (297)
T 2ojh_A           96 GALYAISDKVEFGKSAIYLLPSTGGTP----RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH  170 (297)
T ss_dssp             SSEEEEEECTTTSSCEEEEEETTCCCC----EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred             CCEEEEEEeCCCCcceEEEEECCCCce----EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence              777777  33445555  4444432    222222 23666677  788776 777889999998532 233456677


Q ss_pred             CcccEEEEEeC--CCEEEEEe-CCCcEEEEECC-CCeeeEEecCcccCeEEEEe--cCCEEEEEeCC-----------Cc
Q psy9182         396 HKRGIACLQYR--DRLVVSGS-SDNTIRLWDIE-CGACLRVLEGHEELVRCIRF--DAKRIVSGAYD-----------GK  458 (486)
Q Consensus       396 ~~~~v~~~~~~--~~~l~~~~-~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~d-----------g~  458 (486)
                      +...+.++.|+  +++|+.++ .++.+++|++. .+..+..+..|...+.+++|  ++++|++++.+           +.
T Consensus       171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~  250 (297)
T 2ojh_A          171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR  250 (297)
T ss_dssp             SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred             CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence            77888888884  77777666 58999999986 56677788888888999999  88898888876           56


Q ss_pred             EEEEeCCCCC
Q psy9182         459 IKVWNLVAAL  468 (486)
Q Consensus       459 v~iwdl~~~~  468 (486)
                      |.+||+.++.
T Consensus       251 l~~~d~~~~~  260 (297)
T 2ojh_A          251 VQLMDMDGGN  260 (297)
T ss_dssp             EEEEETTSCS
T ss_pred             EEEEecCCCC
Confidence            9999998754

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.72  E-value=1.1e-14  Score=137.37  Aligned_cols=296  Identities=10%  Similarity=0.047  Sum_probs=200.4

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcc---------cce-eEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---------RGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~---------~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      ++..|+.++.++.|..+|..+|+.+.......         ..+ .....                 ++..++.++.++.
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~v~~~~g~  114 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-----------------SGGHVYIGSEKAQ  114 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-----------------ETTEEEEEETTSE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-----------------eCCEEEEEcCCCE
Confidence            56688888889999999999999887765422         111 11222                 2334555666777


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  264 (486)
                      |..+|..+++.........                           ......    ...+..+++++.++.|..+|..++
T Consensus       115 l~a~d~~tG~~~W~~~~~~---------------------------~~~~~p----~~~~~~v~v~~~~g~l~~~d~~tG  163 (376)
T 3q7m_A          115 VYALNTSDGTVAWQTKVAG---------------------------EALSRP----VVSDGLVLIHTSNGQLQALNEADG  163 (376)
T ss_dssp             EEEEETTTCCEEEEEECSS---------------------------CCCSCC----EEETTEEEEECTTSEEEEEETTTC
T ss_pred             EEEEECCCCCEEEEEeCCC---------------------------ceEcCC----EEECCEEEEEcCCCeEEEEECCCC
Confidence            7777765544322111000                           000011    123567888899999999999999


Q ss_pred             eeeEEEcCCcccE-----EEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCc-----------cEEEEEEcCCeEE
Q psy9182         265 QCIKVLTGHTGSV-----LCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE-----------AVLHLRFSNGMMV  328 (486)
Q Consensus       265 ~~~~~~~~~~~~v-----~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----------~i~~~~~~~~~l~  328 (486)
                      +.+..........     ......+..+++++.+|.+..+|..+++.+........           ........++.++
T Consensus       164 ~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~  243 (376)
T 3q7m_A          164 AVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVF  243 (376)
T ss_dssp             CEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEE
T ss_pred             cEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEE
Confidence            9888776432211     12223466788888899999999999998877653211           0012223467889


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcC-CcccEEEEEeCC
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-HKRGIACLQYRD  407 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~  407 (486)
                      +++.++.+..+|..+++......     ......+..++..++.++.++.|..+|..+++.+..... ...........+
T Consensus       244 ~~~~~g~l~~~d~~tG~~~w~~~-----~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~  318 (376)
T 3q7m_A          244 ALAYNGNLTALDLRSGQIMWKRE-----LGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYN  318 (376)
T ss_dssp             EECTTSCEEEEETTTCCEEEEEC-----CCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEET
T ss_pred             EEecCcEEEEEECCCCcEEeecc-----CCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEEC
Confidence            99999999999999887543211     122445556788888899999999999999998877762 222333344457


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEe
Q psy9182         408 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwd  463 (486)
                      ..|+.++.+|.|.++|.++|+.+.........+. .....+..|+.++.+|.|..|+
T Consensus       319 ~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          319 GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence            8899999999999999999999888776444333 2334677889999999999987

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.70  E-value=5.9e-15  Score=152.00  Aligned_cols=315  Identities=12%  Similarity=0.049  Sum_probs=194.0

Q ss_pred             cccccccCCccCcceEEEeecCceeeecccccccceeeecCccccee-----EEEeecceeEecCCCCceeccCcceeec
Q psy9182         104 QRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA-----CLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~-----~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      .....++.++|||++++++  ||.|++||+.+++....+.+|.....     .++|+               +|+++|+.
T Consensus        16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S---------------pdg~~l~~   78 (740)
T 4a5s_A           16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSIS---------------PDGQFILL   78 (740)
T ss_dssp             CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEEC---------------TTSSEEEE
T ss_pred             cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEEC---------------CCCCEEEE
Confidence            3446678999999999986  89999999999998888888864432     24555               57777777


Q ss_pred             CCCC---------CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE
Q psy9182         179 SSHD---------DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS  249 (486)
Q Consensus       179 ~s~d---------g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  249 (486)
                      ++.+         +.+.+||+.++.......                              ........+++|||+.||.
T Consensus        79 ~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~------------------------------~~~~~~~~~~SPdG~~la~  128 (740)
T 4a5s_A           79 EYNYVKQWRHSYTASYDIYDLNKRQLITEER------------------------------IPNNTQWVTWSPVGHKLAY  128 (740)
T ss_dssp             EEEEEECSSSCEEEEEEEEETTTTEECCSSC------------------------------CCTTEEEEEECSSTTCEEE
T ss_pred             EECCeeeEEEccceEEEEEECCCCcEEEccc------------------------------CCCcceeeEECCCCCEEEE
Confidence            7765         455699987755432211                              0122345678999999988


Q ss_pred             EecCCeEEEEECCCceeeEEE-cCCcccE-----------------EEEEe--cCCEEEEEeCCC---------------
Q psy9182         250 GLRDNTIKVWDRVSLQCIKVL-TGHTGSV-----------------LCLQY--DERVIISGSSDS---------------  294 (486)
Q Consensus       250 ~~~dg~i~i~d~~~~~~~~~~-~~~~~~v-----------------~~~~~--~~~~l~~~~~dg---------------  294 (486)
                      + .++.|++||..+++..+.. .++...+                 .++.|  ||+.|+.++.|.               
T Consensus       129 ~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~  207 (740)
T 4a5s_A          129 V-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES  207 (740)
T ss_dssp             E-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT
T ss_pred             E-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC
Confidence            8 5789999999887755422 2332222                 12444  899888875321               


Q ss_pred             ---------------------cEEEEECCC---Cc--EEEEec------ccCccEEEEEEcCC--eEEEEeC----CCcE
Q psy9182         295 ---------------------TVRVWDVNT---GE--MVNTLI------HHCEAVLHLRFSNG--MMVTCSK----DRSI  336 (486)
Q Consensus       295 ---------------------~i~vwd~~~---~~--~~~~~~------~~~~~i~~~~~~~~--~l~~~~~----dg~i  336 (486)
                                           .|++||+.+   ++  ....+.      .+...+..++|+++  .++....    +..|
T Consensus       208 ~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i  287 (740)
T 4a5s_A          208 LQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVM  287 (740)
T ss_dssp             CSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEE
T ss_pred             CCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEE
Confidence                                 488899988   73  223333      26677889999865  3443322    2369


Q ss_pred             EEEECCCCC----ceeeEEe-eecCcccEE-----EEEe--CCCEEE-EEeC-C--CcEEEEECCCceEEEEEcCCcccE
Q psy9182         337 AVWDMVSPN----EITLRRV-LVGHRAAVN-----VVDF--DEKYIV-SASG-D--RTIKVWNTSSCEFVRTLNGHKRGI  400 (486)
Q Consensus       337 ~i~d~~~~~----~~~~~~~-~~~~~~~v~-----~~~~--~~~~l~-~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~v  400 (486)
                      .+||+.+++    ....... ...+...+.     ...|  ||+.++ ..+. +  ..|++||..+++.. .+......+
T Consensus       288 ~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v  366 (740)
T 4a5s_A          288 DICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEV  366 (740)
T ss_dssp             EEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCE
T ss_pred             EEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEE
Confidence            999998876    1111111 123433332     3344  888776 5553 3  35888998876654 444334444


Q ss_pred             EE-EEeCCCEEEEEeCC-----C--cEEEEECCCCeeeEEecC----cccCeEEEEe--cCCEEEEEeCC---CcEEEEe
Q psy9182         401 AC-LQYRDRLVVSGSSD-----N--TIRLWDIECGACLRVLEG----HEELVRCIRF--DAKRIVSGAYD---GKIKVWN  463 (486)
Q Consensus       401 ~~-~~~~~~~l~~~~~d-----g--~v~iwd~~~~~~~~~~~~----h~~~v~~~~~--~~~~l~s~~~d---g~v~iwd  463 (486)
                      .. +.++++.|+..+..     +  .|+..++..+.....+..    .......+.|  ++++++.....   ..+.+++
T Consensus       367 ~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~  446 (740)
T 4a5s_A          367 IGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS  446 (740)
T ss_dssp             EEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred             EEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEE
Confidence            44 34677665554433     3  455555554433324432    2356778888  77776654433   3577777


Q ss_pred             CCCC
Q psy9182         464 LVAA  467 (486)
Q Consensus       464 l~~~  467 (486)
                      ...+
T Consensus       447 ~~~~  450 (740)
T 4a5s_A          447 SVND  450 (740)
T ss_dssp             TTTT
T ss_pred             CCCC
Confidence            7644

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.70  E-value=1.1e-14  Score=134.93  Aligned_cols=222  Identities=9%  Similarity=0.055  Sum_probs=156.4

Q ss_pred             eCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-CCcEEEEECCCCcE-EEEecccCcc
Q psy9182         242 YDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS-DSTVRVWDVNTGEM-VNTLIHHCEA  316 (486)
Q Consensus       242 ~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~-~~~~~~~~~~  316 (486)
                      .+++ .+++...++.|.+||..+++....+..+...+ ++++  +++++++++. ++.|.+||+.+++. ...+..+..+
T Consensus         7 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~   85 (331)
T 3u4y_A            7 TTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS   85 (331)
T ss_dssp             CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC
T ss_pred             CCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC
Confidence            3444 46777889999999999999988887666666 7777  7776666655 88999999999987 6666666665


Q ss_pred             EEEEEEcCC--eEEEEeCCC---cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCCc-EEEEECCCc
Q psy9182         317 VLHLRFSNG--MMVTCSKDR---SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDRT-IKVWNTSSC  387 (486)
Q Consensus       317 i~~~~~~~~--~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~~-i~iwd~~~~  387 (486)
                      ..+++++++  .++++..++   .|.+||+.+++....   ... ......+.+  ++++++ +...++. |.+|++...
T Consensus        86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~---~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~  161 (331)
T 3u4y_A           86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST---IPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD  161 (331)
T ss_dssp             CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE---EEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred             ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE---EEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence            555888765  666544443   899999988765432   222 334466666  776554 4456688 999998764


Q ss_pred             eEEE----EEcCCcccEEEEEe--CCCEEEE-EeCCCcEEEEECCCCee---eEEecCcccCeEEEEe--cCCEEEEEe-
Q psy9182         388 EFVR----TLNGHKRGIACLQY--RDRLVVS-GSSDNTIRLWDIECGAC---LRVLEGHEELVRCIRF--DAKRIVSGA-  454 (486)
Q Consensus       388 ~~~~----~~~~~~~~v~~~~~--~~~~l~~-~~~dg~v~iwd~~~~~~---~~~~~~h~~~v~~~~~--~~~~l~s~~-  454 (486)
                      ..+.    ...........+.+  +++++++ +..++.|.+||+.+++.   +..+..+ ..+..++|  ||++|+.++ 
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~  240 (331)
T 3u4y_A          162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE  240 (331)
T ss_dssp             CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred             CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence            3321    11133345666776  4775554 45689999999999888   7777644 56678888  888776655 


Q ss_pred             CCCcEEEEeCCCCCC
Q psy9182         455 YDGKIKVWNLVAALD  469 (486)
Q Consensus       455 ~dg~v~iwdl~~~~~  469 (486)
                      .++.|.+||+.++..
T Consensus       241 ~~~~i~~~d~~~~~~  255 (331)
T 3u4y_A          241 STVDVFNFNQLSGTL  255 (331)
T ss_dssp             SEEEEEEEETTTTEE
T ss_pred             CCCEEEEEECCCCce
Confidence            578899999987543

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.70  E-value=9.9e-15  Score=138.39  Aligned_cols=221  Identities=14%  Similarity=0.084  Sum_probs=134.8

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE----ecCCEEEEE----------------------eCC
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ----YDERVIISG----------------------SSD  293 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~----------------------~~d  293 (486)
                      ++|+++.|+.++.++.|++||+.+++....+..+...+....    .++..++..                      ..+
T Consensus        88 ~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (388)
T 3pe7_A           88 LSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC  167 (388)
T ss_dssp             ECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred             EcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence            345666666666666777777777666555554444332222    255555532                      244


Q ss_pred             CcEEEEECCCCcEEEEecccCccEEEEEEcC-C--eEEEEeCC------CcEEEEECCCCCceeeEEeeecCc--ccEEE
Q psy9182         294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G--MMVTCSKD------RSIAVWDMVSPNEITLRRVLVGHR--AAVNV  362 (486)
Q Consensus       294 g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~--~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~--~~v~~  362 (486)
                      +.|.+||+.+++... +..+...+..+.|+| +  .++....+      ..|.++|...++...    +..+.  ..+..
T Consensus       168 ~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~----l~~~~~~~~~~~  242 (388)
T 3pe7_A          168 CRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK----VKTHAEGESCTH  242 (388)
T ss_dssp             EEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE----SCCCCTTEEEEE
T ss_pred             ceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE----eeeCCCCccccc
Confidence            679999999887544 444566788999988 5  56555543      378888877654322    22222  34555


Q ss_pred             EEe--CCCEEEEEeC-CC----cEEEEECCCceE--EEEEcCCcc-----cEEEEEeCCCEEEEE---------eCCCcE
Q psy9182         363 VDF--DEKYIVSASG-DR----TIKVWNTSSCEF--VRTLNGHKR-----GIACLQYRDRLVVSG---------SSDNTI  419 (486)
Q Consensus       363 ~~~--~~~~l~~~~~-d~----~i~iwd~~~~~~--~~~~~~~~~-----~v~~~~~~~~~l~~~---------~~dg~v  419 (486)
                      ..|  ||+.|+..+. ++    .|++||+.+++.  +..+.++..     .-..++.+|+.|+..         ..+..|
T Consensus       243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i  322 (388)
T 3pe7_A          243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL  322 (388)
T ss_dssp             EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred             ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence            666  7886655432 22    399999998874  333333111     011466677766643         456789


Q ss_pred             EEEECCCCeeeEEecCccc-----------CeEEEEe--cCCEEEEEe-CCCcEEEEeCCC
Q psy9182         420 RLWDIECGACLRVLEGHEE-----------LVRCIRF--DAKRIVSGA-YDGKIKVWNLVA  466 (486)
Q Consensus       420 ~iwd~~~~~~~~~~~~h~~-----------~v~~~~~--~~~~l~s~~-~dg~v~iwdl~~  466 (486)
                      ++||+.+++. ..+..|..           .+.+++|  ||++|+.++ .+|...+|.++.
T Consensus       323 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l  382 (388)
T 3pe7_A          323 YVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL  382 (388)
T ss_dssp             EEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred             EEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence            9999998775 44544544           4677788  888877655 577777776653

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.68  E-value=3.1e-15  Score=149.93  Aligned_cols=224  Identities=16%  Similarity=0.085  Sum_probs=158.6

Q ss_pred             ccceEEEEeCCCEEEEEec-CCeEEEEECCCceeeEEEcCCcccEEEEEecC-CEEEEEeC---CCcEEEEECCC---Cc
Q psy9182         234 SKGVYCLQYDDHKIVSGLR-DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDE-RVIISGSS---DSTVRVWDVNT---GE  305 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~---dg~i~vwd~~~---~~  305 (486)
                      ....+++++||+.|+.++. ||++.||++.+++..+....+...+.++.|.+ +.+++++.   +....+|.+..   +.
T Consensus        23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~  102 (582)
T 3o4h_A           23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGE  102 (582)
T ss_dssp             CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred             chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCc
Confidence            3455678899999998887 99999999877765544433336788888833 56666654   45455654432   33


Q ss_pred             EEEEecc-cCccEEEEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC----CcE
Q psy9182         306 MVNTLIH-HCEAVLHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD----RTI  379 (486)
Q Consensus       306 ~~~~~~~-~~~~i~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----~~i  379 (486)
                      .. .+.. ....+.+++++++ .+++...++.+.+||+.+++.....   ..+ ..-..+++||+++++++.+    +.|
T Consensus       103 ~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~---~~~-~~~~~~spDG~~la~~~~~~~~~~~i  177 (582)
T 3o4h_A          103 EQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA---RLP-GFGFVSDIRGDLIAGLGFFGGGRVSL  177 (582)
T ss_dssp             CE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE---EES-SCEEEEEEETTEEEEEEEEETTEEEE
T ss_pred             cc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee---cCC-CceEEECCCCCEEEEEEEcCCCCeEE
Confidence            22 3322 2233445555554 4555556666779999887543222   222 2333455599999988776    789


Q ss_pred             EEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCC--cEEEEECCCCeeeEEecCcccCeEEEE--------e--
Q psy9182         380 KVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN--TIRLWDIECGACLRVLEGHEELVRCIR--------F--  445 (486)
Q Consensus       380 ~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~--------~--  445 (486)
                      ++||+.+++.. .+..|...+..+.|  +|+.|+++..++  .|++||+.+++.. .+.+|...+..++        |  
T Consensus       178 ~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp  255 (582)
T 3o4h_A          178 FTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLP  255 (582)
T ss_dssp             EEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred             EEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcC
Confidence            99999988754 67778888888877  589999888888  8999999998887 7778877666666        7  


Q ss_pred             cCCEEEEEeCCCcEEEEeC
Q psy9182         446 DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl  464 (486)
                      ||..+++++.||.+++|++
T Consensus       256 dg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          256 DGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             TSCEEEEEEETTEEEEEET
T ss_pred             CCcEEEEEEcCCcEEEEEE
Confidence            8888999999999999999

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.61  E-value=2e-13  Score=139.00  Aligned_cols=318  Identities=11%  Similarity=0.003  Sum_probs=189.1

Q ss_pred             cccccccCCccCcceEEEe--ecCceeeecccccccceeeecCccccee---------EEEeecceeEecCCCCceeccC
Q psy9182         104 QRDFISLLPNFDEKYIVSA--SGDRTIKVWNTSSCEFVRTLNGHKRGIA---------CLQYRDRLVVSGSSDNTIRYRD  172 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg--~~dg~v~iWd~~~~~~~~~l~~h~~~V~---------~~~~~~~~~~~~~~d~~i~~~~  172 (486)
                      ...+....+++++.++++.  +.++...||....+.....+..|...+.         ...|..      +       +|
T Consensus        23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------S-------PD   89 (662)
T 3azo_A           23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVP------R-------PA   89 (662)
T ss_dssp             CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEEC------C-------SS
T ss_pred             CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeee------e-------cC
Confidence            3455666777777777777  6688999999765666677777765554         333320      0       45


Q ss_pred             cce-eecCC-CCCcceeeecc--c-ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE
Q psy9182         173 EFQ-IVSSS-HDDTILIWDFL--N-YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI  247 (486)
Q Consensus       173 ~~~-l~s~s-~dg~i~vWd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  247 (486)
                      ++. |+.++ .+..|.+|++.  . ...........                         ..........+++|||+.|
T Consensus        90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~-------------------------~~~~~~~~~~~~spDg~~l  144 (662)
T 3azo_A           90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSA-------------------------VGGGLRWADPVLLPERGEV  144 (662)
T ss_dssp             SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCC-------------------------STTCEEEEEEEEETTTTEE
T ss_pred             CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCcc-------------------------CCCCccccCcEECCCCCEE
Confidence            555 44333 24445555543  1 11110000000                         0001123346788999999


Q ss_pred             EEEecC----------CeEEEEECCC------ceeeEEEc-CCcccEEEEEe--cCCEEEEEeCC--------CcEEEEE
Q psy9182         248 VSGLRD----------NTIKVWDRVS------LQCIKVLT-GHTGSVLCLQY--DERVIISGSSD--------STVRVWD  300 (486)
Q Consensus       248 ~~~~~d----------g~i~i~d~~~------~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~d--------g~i~vwd  300 (486)
                      ++++.+          ..|++||+.+      ++. ..+. .+...+..++|  ||+.|+.++.+        ..|++||
T Consensus       145 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d  223 (662)
T 3azo_A          145 WCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTAR  223 (662)
T ss_dssp             EEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEE
T ss_pred             EEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEE
Confidence            988877          5899999988      554 3444 45555655555  89999887755        3799999


Q ss_pred             CC-CC---cEEEEecccCccEEEEEEcCC--eEEEEeCCC--cEEEEECCCCCceeeEEeeecCccc--------EEEEE
Q psy9182         301 VN-TG---EMVNTLIHHCEAVLHLRFSNG--MMVTCSKDR--SIAVWDMVSPNEITLRRVLVGHRAA--------VNVVD  364 (486)
Q Consensus       301 ~~-~~---~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~--------v~~~~  364 (486)
                      +. ++   +.......+...+..+.|+++  +++++..++  .|.+||+.+++...   ....+...        +..+.
T Consensus       224 ~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~---l~~~~~~~~~p~w~~~~~~~~  300 (662)
T 3azo_A          224 VTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ---LCRREEEFAGPLWTPGMRWFA  300 (662)
T ss_dssp             ECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE---SSCCSSBSSCCCCSTTCCSEE
T ss_pred             ECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee---cccccccccCccccccCceEe
Confidence            98 56   444334445678899999854  666777777  66677765554322   11122111        33455


Q ss_pred             e--CCCEEEEEeCCCcEEEE--ECCCceEEEEEcCCcccEEEE-EeCCCEEE--EEeCCC--cEEEEECCCCeeeEEecC
Q psy9182         365 F--DEKYIVSASGDRTIKVW--NTSSCEFVRTLNGHKRGIACL-QYRDRLVV--SGSSDN--TIRLWDIECGACLRVLEG  435 (486)
Q Consensus       365 ~--~~~~l~~~~~d~~i~iw--d~~~~~~~~~~~~~~~~v~~~-~~~~~~l~--~~~~dg--~v~iwd~~~~~~~~~~~~  435 (486)
                      +  +++++++++. +.+++|  |+.+++ +..+..+...+..+ +++++.++  +++.+.  .|.++|+.+++.......
T Consensus       301 ~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~  378 (662)
T 3azo_A          301 PLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGAR  378 (662)
T ss_dssp             ECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred             EeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecC
Confidence            5  6788888888 999999  666665 67788887778887 77765433  334443  466667777776554455


Q ss_pred             cccCeEEEEe-cCCEEEEEeCCC-cEEEEeCC
Q psy9182         436 HEELVRCIRF-DAKRIVSGAYDG-KIKVWNLV  465 (486)
Q Consensus       436 h~~~v~~~~~-~~~~l~s~~~dg-~v~iwdl~  465 (486)
                      +...+....+ ....+...+.|| .|..|-+.
T Consensus       379 ~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~~  410 (662)
T 3azo_A          379 HTDPVDPAYYPEPQIRTFTAPDGREIHAHIYP  410 (662)
T ss_dssp             CCCSSCGGGSCCCEEEEEECTTSCEEEEEEEC
T ss_pred             CcccCCccccCcceEEEEEcCCCCEEEEEEEC
Confidence            5433333333 222233333344 56666543

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.61  E-value=1.5e-14  Score=148.78  Aligned_cols=295  Identities=13%  Similarity=0.064  Sum_probs=179.7

Q ss_pred             cccccCCccCcceEEEeec---------Cceeeecccccccce--eeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         106 DFISLLPNFDEKYIVSASG---------DRTIKVWNTSSCEFV--RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~---------dg~v~iWd~~~~~~~--~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      .+.++.+||||++|++++.         ++.|++||+.+++.+  ..+.   ..+..++|+               +|++
T Consensus        61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~S---------------PDG~  122 (719)
T 1z68_A           61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWS---------------PVGS  122 (719)
T ss_dssp             TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEEC---------------SSTT
T ss_pred             ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceEC---------------CCCC
Confidence            3678899999999999876         799999999998763  2232   467888887               6888


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      .|+.+. ++.|++|++.++.............   .......|-...        .........+++|||+.|++++.|.
T Consensus       123 ~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~---v~~g~~~~v~~e--------e~~~~~~~~~wSPDG~~la~~~~d~  190 (719)
T 1z68_A          123 KLAYVY-QNNIYLKQRPGDPPFQITFNGRENK---IFNGIPDWVYEE--------EMLATKYALWWSPNGKFLAYAEFND  190 (719)
T ss_dssp             CEEEEE-TTEEEEESSTTSCCEECCCCCBTTT---EEESSCCHHHHH--------HTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred             EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC---eEcccccceeee--------ecccCcccEEECCCCCEEEEEEECC
Confidence            888774 7899999987654432211110000   000000000000        0001123578899999999987652


Q ss_pred             ----------------------------------eEEEEECCCceee---E-----EEcCCcccEEEEEe--cCCEEEEE
Q psy9182         255 ----------------------------------TIKVWDRVSLQCI---K-----VLTGHTGSVLCLQY--DERVIISG  290 (486)
Q Consensus       255 ----------------------------------~i~i~d~~~~~~~---~-----~~~~~~~~v~~~~~--~~~~l~~~  290 (486)
                                                        .|++||+.+++..   .     .+.+|...+.+++|  |++++++.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~  270 (719)
T 1z68_A          191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQW  270 (719)
T ss_dssp             TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred             CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence                                              7889999988753   1     13357778888888  76666664


Q ss_pred             eCC----CcEEEEE----CCCCcEEEEe----cccCccEE-----EEEEcCC--eEE--EEeCCC--cEEEEECCCCCce
Q psy9182         291 SSD----STVRVWD----VNTGEMVNTL----IHHCEAVL-----HLRFSNG--MMV--TCSKDR--SIAVWDMVSPNEI  347 (486)
Q Consensus       291 ~~d----g~i~vwd----~~~~~~~~~~----~~~~~~i~-----~~~~~~~--~l~--~~~~dg--~i~i~d~~~~~~~  347 (486)
                      ...    ..|.+||    +.+++....+    ..+...+.     .+.|+++  .++  +...+|  .|.+||+.+++. 
T Consensus       271 ~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-  349 (719)
T 1z68_A          271 LKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-  349 (719)
T ss_dssp             EESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-
T ss_pred             eccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-
Confidence            332    2488999    8777654433    24455554     6778764  333  344555  566777766552 


Q ss_pred             eeEEeeecCcccEEEEEe-CCCEEEEEeCC-----CcEEEEECCC--ce-EEEEEcC----CcccEEEEEe--CCCEEE-
Q psy9182         348 TLRRVLVGHRAAVNVVDF-DEKYIVSASGD-----RTIKVWNTSS--CE-FVRTLNG----HKRGIACLQY--RDRLVV-  411 (486)
Q Consensus       348 ~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d-----~~i~iwd~~~--~~-~~~~~~~----~~~~v~~~~~--~~~~l~-  411 (486)
                         ..+..+...+..+.+ +++.++..+.+     +..++|.+..  +. ....+..    |...+..+.+  ++++++ 
T Consensus       350 ---~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~  426 (719)
T 1z68_A          350 ---IQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYAL  426 (719)
T ss_dssp             ---EECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred             ---EecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEE
Confidence               223333444443322 77777766654     7788887653  32 1233332    5555666666  455555 


Q ss_pred             EEeCC--CcEEEEECCCCeeeEEec
Q psy9182         412 SGSSD--NTIRLWDIECGACLRVLE  434 (486)
Q Consensus       412 ~~~~d--g~v~iwd~~~~~~~~~~~  434 (486)
                      +++.+  ..+.+||+.+++.+..+.
T Consensus       427 ~~s~~~~p~~~l~d~~~g~~~~~~~  451 (719)
T 1z68_A          427 VCYGPGIPISTLHDGRTDQEIKILE  451 (719)
T ss_dssp             EECCBSSCEEEEECSSSCCEEEEEE
T ss_pred             EcCCCCCCeEEEEECCCCCEEEEee
Confidence            44433  568999998888766554

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.60  E-value=1e-12  Score=123.96  Aligned_cols=227  Identities=8%  Similarity=0.041  Sum_probs=163.0

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE--
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV--  317 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i--  317 (486)
                      ...++..+++++.++.|..+|..+++.+................+..+++++.++.|..+|.++|+.+..........  
T Consensus        99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~  178 (376)
T 3q7m_A           99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSL  178 (376)
T ss_dssp             EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----
T ss_pred             ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceee
Confidence            344677888999999999999999998877765433222223356788889999999999999999888775532221  


Q ss_pred             ---EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcc----c---E-EEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         318 ---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRA----A---V-NVVDFDEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       318 ---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----~---v-~~~~~~~~~l~~~~~d~~i~iwd~~~  386 (486)
                         ......++.+++++.++.+..+|..+++..-..........    .   + ......+..++.++.++.+..+|.++
T Consensus       179 ~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t  258 (376)
T 3q7m_A          179 RGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS  258 (376)
T ss_dssp             CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT
T ss_pred             cCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC
Confidence               22334467889999999999999998876532221110000    0   0 11122567788888899999999999


Q ss_pred             ceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182         387 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       387 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ++.+.....  .....+..++..++.++.++.|..+|..+|+.+..... ....+......+..|+.++.+|.|.++|..
T Consensus       259 G~~~w~~~~--~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~  336 (376)
T 3q7m_A          259 GQIMWKREL--GSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVE  336 (376)
T ss_dssp             CCEEEEECC--CCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETT
T ss_pred             CcEEeeccC--CCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECC
Confidence            998876653  33455666788899999999999999999998887762 223344445567889999999999999988


Q ss_pred             CCC
Q psy9182         466 AAL  468 (486)
Q Consensus       466 ~~~  468 (486)
                      ++.
T Consensus       337 tG~  339 (376)
T 3q7m_A          337 DGR  339 (376)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            765

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.59  E-value=1e-12  Score=123.37  Aligned_cols=232  Identities=8%  Similarity=0.074  Sum_probs=150.5

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECC-CceeeEEEcCC-cccEEEEEe--cCCE--EEEEe-------------CCC
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRV-SLQCIKVLTGH-TGSVLCLQY--DERV--IISGS-------------SDS  294 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~--~~~~--l~~~~-------------~dg  294 (486)
                      ...-+++++++++|++++.+ .|.+|++. +++........ .+...++++  ++++  ++++.             .+|
T Consensus        41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g  119 (365)
T 1jof_A           41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG  119 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred             CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence            34457788999999998888 99999987 77765433210 122333444  6774  44553             689


Q ss_pred             cEEEEECC-CCcEEEEec----ccCccEEEEEEcCC--eEEEEe-CCCcEEEEECC-CCCceeeEEeee--cCcccEEEE
Q psy9182         295 TVRVWDVN-TGEMVNTLI----HHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMV-SPNEITLRRVLV--GHRAAVNVV  363 (486)
Q Consensus       295 ~i~vwd~~-~~~~~~~~~----~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~--~~~~~v~~~  363 (486)
                      .+.+|++. +++....+.    .+...+.+++|+++  .++++. .++.|++||+. +++... .....  .+...+..+
T Consensus       120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~g~~p~~~  198 (365)
T 1jof_A          120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDHPRWV  198 (365)
T ss_dssp             EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCCEEEE
T ss_pred             eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEecCCCCCCCCEe
Confidence            99999997 466554443    24567889999875  566655 46899999998 555322 12222  234556677


Q ss_pred             Ee--CCCEEEEEeC-CCcEEEEECC--CceEE---EEEc---C----Ccc------cEEEEE-e--CCCEEEEEeCC-C-
Q psy9182         364 DF--DEKYIVSASG-DRTIKVWNTS--SCEFV---RTLN---G----HKR------GIACLQ-Y--RDRLVVSGSSD-N-  417 (486)
Q Consensus       364 ~~--~~~~l~~~~~-d~~i~iwd~~--~~~~~---~~~~---~----~~~------~v~~~~-~--~~~~l~~~~~d-g-  417 (486)
                      .|  +|+++++++. ++.|.+|++.  +++..   ..+.   .    |..      .+..+. +  +|++|+++..+ + 
T Consensus       199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~  278 (365)
T 1jof_A          199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF  278 (365)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred             EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence            77  7888888775 6899999765  56542   2222   1    121      366666 5  58888776543 2 


Q ss_pred             ----cEEEEECC-CCeeeE---EecCcccCeEEEEe-----cCCEEEEEeCC-CcEEEEeCCCC
Q psy9182         418 ----TIRLWDIE-CGACLR---VLEGHEELVRCIRF-----DAKRIVSGAYD-GKIKVWNLVAA  467 (486)
Q Consensus       418 ----~v~iwd~~-~~~~~~---~~~~h~~~v~~~~~-----~~~~l~s~~~d-g~v~iwdl~~~  467 (486)
                          .|.+|++. +++...   ....+...+..++|     ||++|++++.+ +.|.+|+++..
T Consensus       279 ~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          279 ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence                89999996 566543   23334333444444     58999998875 89999998754

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.58  E-value=2.5e-13  Score=128.98  Aligned_cols=286  Identities=9%  Similarity=0.002  Sum_probs=172.6

Q ss_pred             ecccccccceeeecCcccc-----eeEEEeecceeEecCCCCceeccCcceeecCCC---CCcceeeecccccccccCCC
Q psy9182         130 VWNTSSCEFVRTLNGHKRG-----IACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH---DDTILIWDFLNYSETPIQGG  201 (486)
Q Consensus       130 iWd~~~~~~~~~l~~h~~~-----V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~---dg~i~vWd~~~~~~~~~~~~  201 (486)
                      ..|..+++.+..+..+...     +..++|+               +|+++|+....   +..|.+||+.++....... 
T Consensus        14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~S---------------pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-   77 (396)
T 3c5m_A           14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFT---------------QDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-   77 (396)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBC---------------TTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-
T ss_pred             eecCCCCcceEEEecCCCCccceeeecCcCC---------------CCCCEEEEEEecCCCceEEEEECCCCcEEEeec-
Confidence            4477788777777655433     5556665               56666554432   2356777765433221110 


Q ss_pred             CCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEE--
Q psy9182         202 GGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC--  279 (486)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--  279 (486)
                                                  ..........++++++.|+.++.++.|++||+.+++.......+......  
T Consensus        78 ----------------------------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~  129 (396)
T 3c5m_A           78 ----------------------------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGT  129 (396)
T ss_dssp             ----------------------------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEE
T ss_pred             ----------------------------CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCC
Confidence                                        00111122567899999999999999999999988876666544432211  


Q ss_pred             -EE------------------ecCCEEEEE-----eCCCcEEEEECCCCcEEEEecccCccEEEEEEcC-C--eEEEEeC
Q psy9182         280 -LQ------------------YDERVIISG-----SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-G--MMVTCSK  332 (486)
Q Consensus       280 -~~------------------~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~--~l~~~~~  332 (486)
                       +.                  .+++.++.+     ..+..|.+||+.+++..... .+...+..+.|++ +  .++..+.
T Consensus       130 ~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~  208 (396)
T 3c5m_A          130 WVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHE  208 (396)
T ss_dssp             EEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEEC
T ss_pred             EEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEec
Confidence             11                  133333322     34568999999988765444 4566788899987 3  4555544


Q ss_pred             C------CcEEEEECCCCCceeeEEeeecC-cccEEEEEe--CCCEEEEEeCC-----CcEEEEECCCceEEEEEcCCcc
Q psy9182         333 D------RSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDF--DEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       333 d------g~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      +      ..|.+||+..++...   ..... ...+..+.|  +|++|+.++.+     +.|++||+.+++..........
T Consensus       209 ~~~~~~~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~  285 (396)
T 3c5m_A          209 GPHDLVDARMWLVNEDGSNVRK---IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC  285 (396)
T ss_dssp             SCSSSCSCCCEEEETTSCCCEE---SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE
T ss_pred             CCCCCCCceEEEEECCCCceeE---eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC
Confidence            3      368889987654321   11111 234666666  78877666543     4499999988865443222111


Q ss_pred             cEEEEEe-CCCEEEEEe----------------CCCcEEEEECCCCeeeEEecCccc-----------CeEEEEe--cCC
Q psy9182         399 GIACLQY-RDRLVVSGS----------------SDNTIRLWDIECGACLRVLEGHEE-----------LVRCIRF--DAK  448 (486)
Q Consensus       399 ~v~~~~~-~~~~l~~~~----------------~dg~v~iwd~~~~~~~~~~~~h~~-----------~v~~~~~--~~~  448 (486)
                      . ..++. ++++++.++                .++.|++||+.+++.. .+..+..           .+..+.|  ||+
T Consensus       286 ~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~  363 (396)
T 3c5m_A          286 S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDD  363 (396)
T ss_dssp             E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred             C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCC
Confidence            1 44555 788888765                3478999999887754 3444433           2455667  888


Q ss_pred             EEEEEeC-CCcEEEEeCC
Q psy9182         449 RIVSGAY-DGKIKVWNLV  465 (486)
Q Consensus       449 ~l~s~~~-dg~v~iwdl~  465 (486)
                      +|+.++. ++...+|.++
T Consensus       364 ~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          364 GVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             EEEEEECTTSSCEEEEEE
T ss_pred             eEEEEecCCCCceEEEEE
Confidence            8877664 5665565544

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.57  E-value=4.9e-12  Score=118.74  Aligned_cols=266  Identities=6%  Similarity=-0.001  Sum_probs=162.5

Q ss_pred             eEEEeecC--ceeeeccc--cccccee--eec-CcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeec
Q psy9182         118 YIVSASGD--RTIKVWNT--SSCEFVR--TLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF  190 (486)
Q Consensus       118 ~l~tg~~d--g~v~iWd~--~~~~~~~--~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~  190 (486)
                      +++.|+..  +.|.+|++  .+|++..  ... ++...+..++|+               +++++|++++.+ .|.+|++
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~s---------------pdg~~l~~~~~~-~v~~~~~   67 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFD---------------HERKNIYGAAMK-KWSSFAV   67 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEEC---------------TTSSEEEEEEBT-EEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEEC---------------CCCCEEEEEccc-eEEEEEE
Confidence            45555543  56888765  4555322  221 233456778886               577777777777 8999998


Q ss_pred             c-cccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE--EEEEe-------------cCC
Q psy9182         191 L-NYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK--IVSGL-------------RDN  254 (486)
Q Consensus       191 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~-------------~dg  254 (486)
                      . ++....                          ..... ..+. ....++++++++  ++++.             .+|
T Consensus        68 ~~~g~~~~--------------------------~~~~~-~~g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g  119 (365)
T 1jof_A           68 KSPTEIVH--------------------------EASHP-IGGH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG  119 (365)
T ss_dssp             EETTEEEE--------------------------EEEEE-CCSS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred             CCCCCEEE--------------------------eeEee-cCCC-CccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence            5 322110                          00000 0011 122456778884  44443             689


Q ss_pred             eEEEEECC-CceeeEEEc----CCcccEEEEEe--cCCEEEEEeC-CCcEEEEECC-CCcEE--EEec--ccCccEEEEE
Q psy9182         255 TIKVWDRV-SLQCIKVLT----GHTGSVLCLQY--DERVIISGSS-DSTVRVWDVN-TGEMV--NTLI--HHCEAVLHLR  321 (486)
Q Consensus       255 ~i~i~d~~-~~~~~~~~~----~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~-~~~~~--~~~~--~~~~~i~~~~  321 (486)
                      .+.+|++. +++....+.    .+...+.++.+  ++++++++.. ++.|++||+. +++..  ..+.  .+...+..++
T Consensus       120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~  199 (365)
T 1jof_A          120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA  199 (365)
T ss_dssp             EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred             eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence            99999987 465544333    24456778877  7888887654 6799999998 77653  2333  2356688999


Q ss_pred             EcCC--eEEEEeC-CCcEEEEECC--CCCcee---eEEeee----cCcc------cEEEEE-e--CCCEEEEEeCCC---
Q psy9182         322 FSNG--MMVTCSK-DRSIAVWDMV--SPNEIT---LRRVLV----GHRA------AVNVVD-F--DEKYIVSASGDR---  377 (486)
Q Consensus       322 ~~~~--~l~~~~~-dg~i~i~d~~--~~~~~~---~~~~~~----~~~~------~v~~~~-~--~~~~l~~~~~d~---  377 (486)
                      |+++  .+++++. ++.|.+|++.  +++...   ......    ++..      .+..+. +  ||++|++++.+.   
T Consensus       200 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~  279 (365)
T 1jof_A          200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFE  279 (365)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTT
T ss_pred             ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCC
Confidence            9865  6666664 7899999875  343211   111111    1121      466677 5  888888766432   


Q ss_pred             ---cEEEEECC-CceEEE---EEcCCc--ccEEEEEe---CCCEEEEEeCC-CcEEEEECCCC
Q psy9182         378 ---TIKVWNTS-SCEFVR---TLNGHK--RGIACLQY---RDRLVVSGSSD-NTIRLWDIECG  427 (486)
Q Consensus       378 ---~i~iwd~~-~~~~~~---~~~~~~--~~v~~~~~---~~~~l~~~~~d-g~v~iwd~~~~  427 (486)
                         .|.+|++. +++...   ....+.  ..-.+++.   ++++|++++.+ +.|.+|++...
T Consensus       280 ~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          280 LQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             SCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence               89999986 566543   233232  22245566   78999998864 89999998765

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.57  E-value=8.3e-12  Score=115.29  Aligned_cols=232  Identities=15%  Similarity=0.149  Sum_probs=163.0

Q ss_pred             cceEEEEeCCCEEEEEecC------------------------CeEEEEECCCceeeEEEc-CCcccEEEEEe--cCCEE
Q psy9182         235 KGVYCLQYDDHKIVSGLRD------------------------NTIKVWDRVSLQCIKVLT-GHTGSVLCLQY--DERVI  287 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~d------------------------g~i~i~d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l  287 (486)
                      ...++++++|+++++...+                        +.|.+||..+++.+..+. ++-.....+++  +++++
T Consensus        26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~  105 (329)
T 3fvz_A           26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYW  105 (329)
T ss_dssp             EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEE
T ss_pred             ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEE
Confidence            3445677788888887777                        479999999898877665 34456777777  67888


Q ss_pred             EEEeCCCcEEEEECCCCc-EEEEe---------cccCccEEEEEEcC--CeEEEEe--CCCcEEEEECCCCCceeeEEee
Q psy9182         288 ISGSSDSTVRVWDVNTGE-MVNTL---------IHHCEAVLHLRFSN--GMMVTCS--KDRSIAVWDMVSPNEITLRRVL  353 (486)
Q Consensus       288 ~~~~~dg~i~vwd~~~~~-~~~~~---------~~~~~~i~~~~~~~--~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~  353 (486)
                      ++...++.|++||..... .+..+         ..+......+++++  +.++++.  .++.|++||. .+.........
T Consensus       106 v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~  184 (329)
T 3fvz_A          106 VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEE  184 (329)
T ss_dssp             EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEE
T ss_pred             EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccC
Confidence            888888999999986442 44444         23344678899985  3444444  5899999994 44433222111


Q ss_pred             e-------cCcccEEEEEe--C-CCEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEeCCCEEEE--------E
Q psy9182         354 V-------GHRAAVNVVDF--D-EKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVS--------G  413 (486)
Q Consensus       354 ~-------~~~~~v~~~~~--~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~--------~  413 (486)
                      .       ++-.....+++  + +.++++...++.|++||..+++.+..+.  .+...+..+.+.+.+++.        .
T Consensus       185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~  264 (329)
T 3fvz_A          185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD  264 (329)
T ss_dssp             CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC
T ss_pred             CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc
Confidence            0       12223566776  5 5666677788899999999899888885  344566666665433332        2


Q ss_pred             eCCCcEEEEECCCCeeeEEec---CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         414 SSDNTIRLWDIECGACLRVLE---GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       414 ~~dg~v~iwd~~~~~~~~~~~---~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      ..+..|++||..+++.+..+.   ++...+..|++  +|..+++...++.|++|++...
T Consensus       265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred             CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence            334589999999999998883   66777899999  6767888888999999998754

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.56  E-value=1.1e-11  Score=121.89  Aligned_cols=311  Identities=11%  Similarity=0.126  Sum_probs=205.4

Q ss_pred             CccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecc
Q psy9182         112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFL  191 (486)
Q Consensus       112 ~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~  191 (486)
                      .++.+.++++...++.|.++|..+++.+.++.... .+..+.|+               +|++++++++.|+.|.+||+.
T Consensus       163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~S---------------pDGr~lyv~~~dg~V~viD~~  226 (567)
T 1qks_A          163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLS---------------ASGRYLFVIGRDGKVNMIDLW  226 (567)
T ss_dssp             CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEEC---------------TTSCEEEEEETTSEEEEEETT
T ss_pred             cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEEC---------------CCCCEEEEEcCCCeEEEEECC
Confidence            44566778888899999999999999998887543 45677786               678888888889999999974


Q ss_pred             --cccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEE----eCCCEEEEEec-CCeEEEEECCCc
Q psy9182         192 --NYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQ----YDDHKIVSGLR-DNTIKVWDRVSL  264 (486)
Q Consensus       192 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~l~~~~~-dg~i~i~d~~~~  264 (486)
                        +..                            ....+..  +....-++++    |+|++++++.. ++.|.++|..+.
T Consensus       227 ~~t~~----------------------------~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~  276 (567)
T 1qks_A          227 MKEPT----------------------------TVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL  276 (567)
T ss_dssp             SSSCC----------------------------EEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred             CCCCc----------------------------EeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence              221                            1122221  2233456678    69998877664 589999999999


Q ss_pred             eeeEEEcCCc----------c-cEEEEEe--c-CCEEEEEeCCCcEEEEECCCCcEEEEe-cccCccEEEEEEcCC--eE
Q psy9182         265 QCIKVLTGHT----------G-SVLCLQY--D-ERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       265 ~~~~~~~~~~----------~-~v~~~~~--~-~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~~--~l  327 (486)
                      +.++.+....          . .+..+..  + ..+++....+|.|.++|..+.+..... .........+.|+++  ++
T Consensus       277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~  356 (567)
T 1qks_A          277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF  356 (567)
T ss_dssp             CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred             cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence            9988775321          2 3555554  3 345666667799999998876432221 122344567778764  55


Q ss_pred             EE-EeCCCcEEEEECCCCCceeeEEe--eecCcc-cEEEEEeCCCEE-EEEe-CCCcEEEEECCC-------ceEEEEEc
Q psy9182         328 VT-CSKDRSIAVWDMVSPNEITLRRV--LVGHRA-AVNVVDFDEKYI-VSAS-GDRTIKVWNTSS-------CEFVRTLN  394 (486)
Q Consensus       328 ~~-~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~-~v~~~~~~~~~l-~~~~-~d~~i~iwd~~~-------~~~~~~~~  394 (486)
                      ++ ...++.|.++|+.+++.......  ...|.. ...-+..++..+ +++. .++.|.++|..+       .+.++++.
T Consensus       357 ~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~  436 (567)
T 1qks_A          357 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP  436 (567)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred             EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe
Confidence            54 44678999999998875543332  123432 222234454444 4443 468999999988       67888887


Q ss_pred             CCcccE--EEEEeCCCEEEEEeC-------CCcEEEEECCCC-----e-eeEEec--------CcccCeEEEEe--cCCE
Q psy9182         395 GHKRGI--ACLQYRDRLVVSGSS-------DNTIRLWDIECG-----A-CLRVLE--------GHEELVRCIRF--DAKR  449 (486)
Q Consensus       395 ~~~~~v--~~~~~~~~~l~~~~~-------dg~v~iwd~~~~-----~-~~~~~~--------~h~~~v~~~~~--~~~~  449 (486)
                      .....-  .....+++++.+...       .+.|.++|+.+.     . ....+.        .....+..+.|  +|++
T Consensus       437 ~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  516 (567)
T 1qks_A          437 ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTE  516 (567)
T ss_dssp             CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSE
T ss_pred             cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCE
Confidence            654332  234456888887663       459999999876     2 113332        12346778888  8888


Q ss_pred             EEEEe-----CCCcEEEEeCCCCC
Q psy9182         450 IVSGA-----YDGKIKVWNLVAAL  468 (486)
Q Consensus       450 l~s~~-----~dg~v~iwdl~~~~  468 (486)
                      +..+.     .++.|.|+|..+..
T Consensus       517 ~~~s~~~~~~~~~~i~v~D~~t~~  540 (567)
T 1qks_A          517 VWFSVWNGKDQESALVVVDDKTLE  540 (567)
T ss_dssp             EEEEEECCTTSCCEEEEEETTTTE
T ss_pred             EEEEeecCCCCCCcEEEEECCCce
Confidence            76653     37999999988754

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.56  E-value=1.1e-11  Score=112.03  Aligned_cols=222  Identities=13%  Similarity=0.195  Sum_probs=152.6

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC------CcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEE
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG------HTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMV  307 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~  307 (486)
                      +++++++.++++...++.|.+||.. ++.+..+..      +...+.++++  .+..++++..  ++.|.+|| .+++.+
T Consensus        35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~  112 (286)
T 1q7f_A           35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV  112 (286)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE
T ss_pred             EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE
Confidence            4556678888888889999999977 566666542      3356778887  2344444443  78999999 567777


Q ss_pred             EEecc-cCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182         308 NTLIH-HCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       308 ~~~~~-~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iw  382 (486)
                      ..+.. +...+..++++++  .+++...++.|.+||.. ++..... ....+...+..+.+  +++++++...++.|++|
T Consensus       113 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~  190 (286)
T 1q7f_A          113 RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKF-GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVF  190 (286)
T ss_dssp             EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEE
T ss_pred             EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEe-CCCCccCCcEEEEECCCCCEEEEECCCCEEEEE
Confidence            66643 3456788888753  55555668899999964 3322211 11133445777777  56666766778999999


Q ss_pred             ECCCceEEEEEcCC--cccEEEEEeC--CCEEEEEeCCC-cEEEEECCCCeeeEEecCccc--CeEEEEe--cCCEEEEE
Q psy9182         383 NTSSCEFVRTLNGH--KRGIACLQYR--DRLVVSGSSDN-TIRLWDIECGACLRVLEGHEE--LVRCIRF--DAKRIVSG  453 (486)
Q Consensus       383 d~~~~~~~~~~~~~--~~~v~~~~~~--~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~h~~--~v~~~~~--~~~~l~s~  453 (486)
                      |. +++.+..+..+  ......++++  ++++++...++ .|.+||. +++.+..+..+..  .+.++++  +|+.+++ 
T Consensus       191 ~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-  267 (286)
T 1q7f_A          191 NY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-  267 (286)
T ss_dssp             ET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-
T ss_pred             cC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-
Confidence            97 45666666543  3567777774  77777777775 9999995 4777777765433  4678888  6665555 


Q ss_pred             eCCCcEEEEeCCC
Q psy9182         454 AYDGKIKVWNLVA  466 (486)
Q Consensus       454 ~~dg~v~iwdl~~  466 (486)
                      +.|+.|++|++..
T Consensus       268 ~~~~~v~v~~~~~  280 (286)
T 1q7f_A          268 SKDYRLYIYRYVQ  280 (286)
T ss_dssp             ETTTEEEEEECSC
T ss_pred             CCCCeEEEEEccc
Confidence            6799999999864

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.55  E-value=5.6e-12  Score=112.91  Aligned_cols=206  Identities=9%  Similarity=0.077  Sum_probs=148.1

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCc-ccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccC-ccEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT-GSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC-EAVL  318 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~i~  318 (486)
                      .++.|++++.++.|.+||.++++.+..+..+. ..+.++.+  +|++++  +.++.|..||. +++.+..+..+. ..+.
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~   80 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ   80 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence            35778999999999999999999999998765 35555555  788887  45778999999 899999887643 4566


Q ss_pred             EEEEcC--CeEEEEeC-CCcEEEEECCCCCceeeEEeee---cCcccEE--EEEeCCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         319 HLRFSN--GMMVTCSK-DRSIAVWDMVSPNEITLRRVLV---GHRAAVN--VVDFDEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       319 ~~~~~~--~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~---~~~~~v~--~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      ++.+.+  +.+++.+. ++.|..+|. +++.+.......   .+.....  ....+|+++++...++.|..||.+ |+.+
T Consensus        81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~  158 (276)
T 3no2_A           81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL  158 (276)
T ss_dssp             EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred             ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence            677654  36666666 777888876 455433222111   1111222  233389999999999999999988 9999


Q ss_pred             EEEcCCcccEEEE-EeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc------cCeEEEEe--cCCEEEEE
Q psy9182         391 RTLNGHKRGIACL-QYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE------ELVRCIRF--DAKRIVSG  453 (486)
Q Consensus       391 ~~~~~~~~~v~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~------~~v~~~~~--~~~~l~s~  453 (486)
                      .++.......... ..+++++++++.++.|..+|..+|+.+..+..+.      ..+..+..  +|+.+++.
T Consensus       159 w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          159 NSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             EEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             EEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence            9888654332222 2358899988888899999999999999986442      12566666  77777666

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.55  E-value=1.7e-11  Score=113.46  Aligned_cols=210  Identities=10%  Similarity=0.078  Sum_probs=135.4

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC----CcEEEEECCCCcEEEEec--c
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD----STVRVWDVNTGEMVNTLI--H  312 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~--~  312 (486)
                      ++++++++++..++.|.+||..+++.......+...+.++.+  +++++++...+    +.|.+||..++.....+.  .
T Consensus        53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~  132 (333)
T 2dg1_A           53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS  132 (333)
T ss_dssp             CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS
T ss_pred             CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc
Confidence            446666666777788888888877765544445677888888  56766666655    689999998877654332  2


Q ss_pred             cCccEEEEEEcCC-eEEEEeC-------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEE
Q psy9182         313 HCEAVLHLRFSNG-MMVTCSK-------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKV  381 (486)
Q Consensus       313 ~~~~i~~~~~~~~-~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i  381 (486)
                      ....+..+.++++ .+++++.       .+.|..+|..+++.....    .....+..+.+  +++.++.+ +.++.|.+
T Consensus       133 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~  208 (333)
T 2dg1_A          133 TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII----QNISVANGIALSTDEKVLWVTETTANRLHR  208 (333)
T ss_dssp             SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE----EEESSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred             cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee----cCCCcccceEECCCCCEEEEEeCCCCeEEE
Confidence            3456888888754 4555544       256666766544432211    12234566666  67766544 55789999


Q ss_pred             EECCC-ceEEEE--------EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCccc------CeEEEE
Q psy9182         382 WNTSS-CEFVRT--------LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE------LVRCIR  444 (486)
Q Consensus       382 wd~~~-~~~~~~--------~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~------~v~~~~  444 (486)
                      ||..+ +..+..        +.++ ..+..+.++  ++++++...++.|.+||. +++.+..+..+..      .+.+++
T Consensus       209 ~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~  286 (333)
T 2dg1_A          209 IALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQ  286 (333)
T ss_dssp             EEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEE
T ss_pred             EEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEE
Confidence            99863 332221        1222 345666664  777777777899999998 4777777654433      688899


Q ss_pred             e--cCCEEEEEeCC
Q psy9182         445 F--DAKRIVSGAYD  456 (486)
Q Consensus       445 ~--~~~~l~s~~~d  456 (486)
                      |  |++.|+.++.+
T Consensus       287 ~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          287 FIPGTNQLIICSND  300 (333)
T ss_dssp             ECTTSCEEEEEEEC
T ss_pred             ECCCCCEEEEEeCc
Confidence            9  66677666555

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.55  E-value=2.3e-12  Score=131.68  Aligned_cols=274  Identities=10%  Similarity=0.013  Sum_probs=171.8

Q ss_pred             CCccCcceEEEeecCc---eeeecc--cccccceeeec------CcccceeEEEeecceeEecCCCCceeccCcceee--
Q psy9182         111 LPNFDEKYIVSASGDR---TIKVWN--TSSCEFVRTLN------GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIV--  177 (486)
Q Consensus       111 ~~s~~~~~l~tg~~dg---~v~iWd--~~~~~~~~~l~------~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~--  177 (486)
                      .++|+|++++....++   .-.||-  ...++....+.      +|...+..++|+               +|+++|+  
T Consensus        74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~S---------------PDG~~la~~  138 (695)
T 2bkl_A           74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVS---------------WDGKKVAFA  138 (695)
T ss_dssp             CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEEC---------------TTSSEEEEE
T ss_pred             CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEEC---------------CCCCEEEEE
Confidence            4568999988866544   344454  33444333332      455567888887               6777787  


Q ss_pred             ---cCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         178 ---SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       178 ---s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                         .|+.+..|++||+.++.......                             .........++++|++.|+.++.+.
T Consensus       139 ~~~~G~~~~~i~v~dl~tg~~~~~~~-----------------------------~~~~~~~~~~wspDg~~l~~~~~d~  189 (695)
T 2bkl_A          139 QKPNAADEAVLHVIDVDSGEWSKVDV-----------------------------IEGGKYATPKWTPDSKGFYYEWLPT  189 (695)
T ss_dssp             EEETTCSCCEEEEEETTTCCBCSSCC-----------------------------BSCCTTCCCEECTTSSEEEEEECCC
T ss_pred             ECCCCCceEEEEEEECCCCCCcCCcc-----------------------------cCcccccceEEecCCCEEEEEEecC
Confidence               77778899999997755320000                             0011113467889999999998877


Q ss_pred             e-------------EEEEECCCce----eeEEEcCCcccEEEEEe--cCCEEEEEeCCC----cEEEEECCCCcEEEEec
Q psy9182         255 T-------------IKVWDRVSLQ----CIKVLTGHTGSVLCLQY--DERVIISGSSDS----TVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       255 ~-------------i~i~d~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~  311 (486)
                      .             |++|++.++.    .+.....+...+.++.+  ||++|+.++.++    .|.+||..+++.. .+.
T Consensus       190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~  268 (695)
T 2bkl_A          190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLV  268 (695)
T ss_dssp             CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEE
T ss_pred             CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-Eee
Confidence            6             9999998876    22233345456777777  788888777666    6788877665543 333


Q ss_pred             ccCccEEEEEEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecC-cccEEEEEe-CCCEEEEEeCCCcEEEEECC
Q psy9182         312 HHCEAVLHLRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGH-RAAVNVVDF-DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       312 ~~~~~i~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~  385 (486)
                      .+...+....+.++.++..+.    ++.|.+||+.++...........+ ...+..+.+ ++.++++...|+..++|.+.
T Consensus       269 ~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~  348 (695)
T 2bkl_A          269 KGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVAT  348 (695)
T ss_dssp             ECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred             cCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence            344444444444433555443    578999999876531112223233 445666777 66677888888888887654


Q ss_pred             -CceEEEEEcCC-cccEEEEEe--CCCEEEE-Ee---CCCcEEEEECCCCee
Q psy9182         386 -SCEFVRTLNGH-KRGIACLQY--RDRLVVS-GS---SDNTIRLWDIECGAC  429 (486)
Q Consensus       386 -~~~~~~~~~~~-~~~v~~~~~--~~~~l~~-~~---~dg~v~iwd~~~~~~  429 (486)
                       +++....+..+ ...+..+.+  +++.++. .+   ..++|++||+.+++.
T Consensus       349 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          349 LKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             TTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             CCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence             35556666655 455555655  4555553 32   347899999998774

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.55  E-value=1.3e-12  Score=122.25  Aligned_cols=226  Identities=12%  Similarity=0.100  Sum_probs=153.7

Q ss_pred             eEEEEeCCCEEEEEec----------CCeEEEEECCCceeeEEEcCC------cccE--EEEEecCCEEEEEeC--CCcE
Q psy9182         237 VYCLQYDDHKIVSGLR----------DNTIKVWDRVSLQCIKVLTGH------TGSV--LCLQYDERVIISGSS--DSTV  296 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~------~~~v--~~~~~~~~~l~~~~~--dg~i  296 (486)
                      -+++++++++++++..          ++.|.+||..+++.+..+...      ....  ..++.|+++|+++..  ++.|
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v  133 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI  133 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence            5688999999998863          678999999999888877532      1222  344558999998864  5889


Q ss_pred             EEEECCCCcEEEE-ecccCccEEEEEEcC---CeEEEEeCCCcEEEEECCC-CCceeeEE---eeecCcccE-EEEEeCC
Q psy9182         297 RVWDVNTGEMVNT-LIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVS-PNEITLRR---VLVGHRAAV-NVVDFDE  367 (486)
Q Consensus       297 ~vwd~~~~~~~~~-~~~~~~~i~~~~~~~---~~l~~~~~dg~i~i~d~~~-~~~~~~~~---~~~~~~~~v-~~~~~~~  367 (486)
                      .+||+.+++.+.. +....  ...+.+.+   ..+++.+.||.+.+|++.. ++......   .+......+ .....++
T Consensus       134 ~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g  211 (361)
T 2oiz_A          134 GIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK  211 (361)
T ss_dssp             EEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred             EEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence            9999999988877 54322  12233333   3778888999999999865 33221111   111111111 1113356


Q ss_pred             CEEEEEeCCCcEEEEECCCce--EEEEEcC------------CcccEEEEEeCCCEEEEEeC-----------CCcEEEE
Q psy9182         368 KYIVSASGDRTIKVWNTSSCE--FVRTLNG------------HKRGIACLQYRDRLVVSGSS-----------DNTIRLW  422 (486)
Q Consensus       368 ~~l~~~~~d~~i~iwd~~~~~--~~~~~~~------------~~~~v~~~~~~~~~l~~~~~-----------dg~v~iw  422 (486)
                      ..++..+.++.+.++|+....  ....+..            .......+..+++.++++..           ++.|.+|
T Consensus       212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi  291 (361)
T 2oiz_A          212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM  291 (361)
T ss_dssp             SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred             CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence            677777788999999987543  2222211            11112355566676666543           3589999


Q ss_pred             ECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         423 DIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       423 d~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      |+.+++.+..+..+.  +.+++|  ||++|++++. +.|.+||+.++
T Consensus       292 D~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          292 DTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP  335 (361)
T ss_dssp             ETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred             ECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence            999999999998877  889988  8999998887 99999999876

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.55  E-value=5.5e-12  Score=116.51  Aligned_cols=246  Identities=12%  Similarity=0.092  Sum_probs=164.3

Q ss_pred             ccccccCCccCcceEEEeecC------------------------ceeeecccccccceeeec-CcccceeEEEeeccee
Q psy9182         105 RDFISLLPNFDEKYIVSASGD------------------------RTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLV  159 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~d------------------------g~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~  159 (486)
                      ..+..++++++|+++++...+                        +.|.+||..+++.+..+. ++-.....++++    
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d----   99 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID----   99 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC----
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC----
Confidence            346788899999999888777                        479999999898877664 444567778886    


Q ss_pred             EecCCCCceeccCcceeecCCCCCcceeeeccccc-ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE
Q psy9182         160 VSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS-ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY  238 (486)
Q Consensus       160 ~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  238 (486)
                                 +++..+++...++.|++||..... .........  .            .+.      .........-+
T Consensus       100 -----------~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~--~------------~g~------~~~~~~~P~~i  148 (329)
T 3fvz_A          100 -----------TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM--Q------------PGS------DQNHFCQPTDV  148 (329)
T ss_dssp             -----------TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT--B------------CCC------STTCCSSEEEE
T ss_pred             -----------CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC--C------------CCC------CccccCCCcEE
Confidence                       456667777788899999864321 110000000  0            000      00001123345


Q ss_pred             EEEe-CCCEEEEEe-cCCeEEEEECCCceeeEEEcCC----------cccEEEEEe--c-CCEEEEEeCCCcEEEEECCC
Q psy9182         239 CLQY-DDHKIVSGL-RDNTIKVWDRVSLQCIKVLTGH----------TGSVLCLQY--D-ERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       239 ~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~----------~~~v~~~~~--~-~~~l~~~~~dg~i~vwd~~~  303 (486)
                      ++++ ++..+++.+ .++.|++|| .+++.+..+...          -.....+++  + +.++++...++.|++||..+
T Consensus       149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~  227 (329)
T 3fvz_A          149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT  227 (329)
T ss_dssp             EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred             EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence            6677 677777775 689999999 567777666422          223677777  4 56666667788999999998


Q ss_pred             CcEEEEec--ccCccEEEEEEcCCeEEEEe--------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE
Q psy9182         304 GEMVNTLI--HHCEAVLHLRFSNGMMVTCS--------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV  371 (486)
Q Consensus       304 ~~~~~~~~--~~~~~i~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~  371 (486)
                      ++.+..+.  .+...+..+++.|+.++...        .+..|++||..+++.........++......+++  +|.+++
T Consensus       228 G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyv  307 (329)
T 3fvz_A          228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYI  307 (329)
T ss_dssp             CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEE
T ss_pred             CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEE
Confidence            99888874  34567888888886554443        2347999999888765433222355566777777  666777


Q ss_pred             EEeCCCcEEEEECCC
Q psy9182         372 SASGDRTIKVWNTSS  386 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~  386 (486)
                      +...++.|++|++..
T Consensus       308 ad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          308 GDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EESSSCCEEEEEEEE
T ss_pred             EECCCCEEEEEeCCc
Confidence            777888999998753

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.54  E-value=1.6e-12  Score=132.32  Aligned_cols=222  Identities=12%  Similarity=0.048  Sum_probs=148.8

Q ss_pred             eCCCE-EEEEec-CCeEEEEECC--C-ceeeEEEcC-----CcccEEEEEe--cCCEEEEEeCC----------CcEEEE
Q psy9182         242 YDDHK-IVSGLR-DNTIKVWDRV--S-LQCIKVLTG-----HTGSVLCLQY--DERVIISGSSD----------STVRVW  299 (486)
Q Consensus       242 ~~~~~-l~~~~~-dg~i~i~d~~--~-~~~~~~~~~-----~~~~v~~~~~--~~~~l~~~~~d----------g~i~vw  299 (486)
                      ||++. |+.++. +..|.++++.  . ++ ...+..     |...+.+++|  ||+.|++++.+          ..|++|
T Consensus        88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~  166 (662)
T 3azo_A           88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV  166 (662)
T ss_dssp             SSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred             cCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence            88988 666543 5667777765  2 33 445554     5566777777  89999988876          589999


Q ss_pred             ECCC------CcEEEEec-ccCccEEEEEEcCC--eEEEEeCC--------CcEEEEECC-CCCceeeEEeeecCcccEE
Q psy9182         300 DVNT------GEMVNTLI-HHCEAVLHLRFSNG--MMVTCSKD--------RSIAVWDMV-SPNEITLRRVLVGHRAAVN  361 (486)
Q Consensus       300 d~~~------~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~d--------g~i~i~d~~-~~~~~~~~~~~~~~~~~v~  361 (486)
                      |+.+      ++. ..+. .+...+..+.|+++  .|+.++.+        ..|++||+. ++..........++...+.
T Consensus       167 ~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~  245 (662)
T 3azo_A          167 PLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA  245 (662)
T ss_dssp             ETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred             ECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence            9987      554 4454 55567777888865  67766644        379999998 4522222233444567788


Q ss_pred             EEEe--CCCEEEEEeCCC--cEEEEECCCceEEEEEcCCccc--------EEEEEe--CCCEEEEEeCCCcEEEE--ECC
Q psy9182         362 VVDF--DEKYIVSASGDR--TIKVWNTSSCEFVRTLNGHKRG--------IACLQY--RDRLVVSGSSDNTIRLW--DIE  425 (486)
Q Consensus       362 ~~~~--~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~--~~~~l~~~~~dg~v~iw--d~~  425 (486)
                      .+.|  ||+++++++.++  .|.+||+.+++.......+...        +..+.+  ++.++++++. +.++||  |+.
T Consensus       246 ~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~  324 (662)
T 3azo_A          246 QAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPE  324 (662)
T ss_dssp             EEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred             ceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence            8887  788888888888  6777777677654433333221        344555  5788888888 999999  666


Q ss_pred             CCeeeEEecCcccCeEEE-EecCCEE--EEEeCCC--cEEEEeCCCC
Q psy9182         426 CGACLRVLEGHEELVRCI-RFDAKRI--VSGAYDG--KIKVWNLVAA  467 (486)
Q Consensus       426 ~~~~~~~~~~h~~~v~~~-~~~~~~l--~s~~~dg--~v~iwdl~~~  467 (486)
                      +++ +..+..|...+..+ +++++.+  ++++.+.  .|.+||+.++
T Consensus       325 ~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g  370 (662)
T 3azo_A          325 SGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG  370 (662)
T ss_dssp             TTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred             CCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            555 67788888888888 8877653  3444454  4555565554

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.54  E-value=8.5e-12  Score=116.16  Aligned_cols=214  Identities=13%  Similarity=0.173  Sum_probs=135.7

Q ss_pred             EEEeCCCEEEEEecC---C--eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-------------------
Q psy9182         239 CLQYDDHKIVSGLRD---N--TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS-------------------  292 (486)
Q Consensus       239 ~~~~~~~~l~~~~~d---g--~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-------------------  292 (486)
                      +++|||+.|+..+.+   +  .|.+||+.+++.......+ . +..+.|  |++.|+.++.                   
T Consensus        65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~  142 (347)
T 2gop_A           65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFD  142 (347)
T ss_dssp             EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC--
T ss_pred             EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeec
Confidence            345566655555432   2  3666777766655544433 2 666666  6676666653                   


Q ss_pred             --------CCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEEeCCC-------cEEEEECCCCCceeeEEeeecC
Q psy9182         293 --------DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTCSKDR-------SIAVWDMVSPNEITLRRVLVGH  356 (486)
Q Consensus       293 --------dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~  356 (486)
                              ...|.+||+.+++.+..+.. . .+..+.|+++ .++++..++       ...+|.+.+++ ..  . +..+
T Consensus       143 g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~--~-l~~~  216 (347)
T 2gop_A          143 DLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EE--K-MFEK  216 (347)
T ss_dssp             -------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EE--E-EEEE
T ss_pred             CcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eE--E-eccC
Confidence                    25799999998887455544 3 6778888876 555554432       34444444332 22  1 1222


Q ss_pred             cccEEEEEeCCCEEEEEeCC--------CcEEEEECCCceEEEEEcCCcccEEE-EEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182         357 RAAVNVVDFDEKYIVSASGD--------RTIKVWNTSSCEFVRTLNGHKRGIAC-LQYRDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       357 ~~~v~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                       ..+..++++|++|+.++.+        ..|.+||  +++.......+...+.. +.|++.++++++.++.+++| +.++
T Consensus       217 -~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g  292 (347)
T 2gop_A          217 -VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDG  292 (347)
T ss_dssp             -ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESS
T ss_pred             -cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCC
Confidence             4455567799988877654        3688888  56654444556666765 66753388889999999999 8766


Q ss_pred             eeeEEecCcccCeEEEEecCCEEEEEeCCCcE-EEEeCC
Q psy9182         428 ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI-KVWNLV  465 (486)
Q Consensus       428 ~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v-~iwdl~  465 (486)
                      +... +..+...|.+++|++..+++++.++.. .+|.++
T Consensus       293 ~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          293 EIKP-IAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             SEEE-EECSSSEEEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred             ceEE-EecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC
Confidence            6544 444577899999955667777777765 788775

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.51  E-value=1.4e-12  Score=134.21  Aligned_cols=264  Identities=10%  Similarity=0.058  Sum_probs=162.8

Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEE
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIV  248 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~  248 (486)
                      +|+.+++++  |++|++||+.++..........                          ........  ..++|||++|+
T Consensus        26 ~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~Spdg~~l~   77 (740)
T 4a5s_A           26 SDHEYLYKQ--ENNILVFNAEYGNSSVFLENST--------------------------FDEFGHSINDYSISPDGQFIL   77 (740)
T ss_dssp             SSSEEEEEE--TTEEEEEETTTCCEEEEECTTT--------------------------TTTCCSCCCEEEECTTSSEEE
T ss_pred             CCCcEEEEc--CCcEEEEECCCCceEEEEechh--------------------------hhhhcccccceEECCCCCEEE
Confidence            567777775  8999999987654332211110                          00111222  67899999999


Q ss_pred             EEecC---------CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-cccCcc
Q psy9182         249 SGLRD---------NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEA  316 (486)
Q Consensus       249 ~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~  316 (486)
                      .++.+         +.+.+||+.+++... +..|...+...+|  ||+.|+.+. ++.|++||+.+++..+.. .++...
T Consensus        78 ~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~  155 (740)
T 4a5s_A           78 LEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDI  155 (740)
T ss_dssp             EEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTT
T ss_pred             EEECCeeeEEEccceEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccc
Confidence            98876         567799999998654 5567777888777  889888874 689999999888754422 222222


Q ss_pred             E-----------------EEEEEcCC--eEEEEeCCC------------------------------------cEEEEEC
Q psy9182         317 V-----------------LHLRFSNG--MMVTCSKDR------------------------------------SIAVWDM  341 (486)
Q Consensus       317 i-----------------~~~~~~~~--~l~~~~~dg------------------------------------~i~i~d~  341 (486)
                      +                 ..+.|+|+  .|+.++.|.                                    .|++||+
T Consensus       156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~  235 (740)
T 4a5s_A          156 IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT  235 (740)
T ss_dssp             EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET
T ss_pred             eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC
Confidence            2                 24778865  566654221                                    4788898


Q ss_pred             CC---CCceeeEEeee-----cCcccEEEEEe--CCCEEEEEeC----CCcEEEEECCCce----EE--EEE--cCCccc
Q psy9182         342 VS---PNEITLRRVLV-----GHRAAVNVVDF--DEKYIVSASG----DRTIKVWNTSSCE----FV--RTL--NGHKRG  399 (486)
Q Consensus       342 ~~---~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~----d~~i~iwd~~~~~----~~--~~~--~~~~~~  399 (486)
                      .+   ++.........     ++...+..+.|  ||+.++....    +..|.+||+.+++    +.  ..+  ..|...
T Consensus       236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~  315 (740)
T 4a5s_A          236 DSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW  315 (740)
T ss_dssp             TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred             CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence            87   63211112211     36677888888  8886665432    3369999998887    21  222  344433


Q ss_pred             EE-------EEEeCCCEEE-EEeC-C--CcEEEEECCCCeeeEEecCcccCeEEEE-ecCCEEEEEeCC-----CcEEEE
Q psy9182         400 IA-------CLQYRDRLVV-SGSS-D--NTIRLWDIECGACLRVLEGHEELVRCIR-FDAKRIVSGAYD-----GKIKVW  462 (486)
Q Consensus       400 v~-------~~~~~~~~l~-~~~~-d--g~v~iwd~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~~~d-----g~v~iw  462 (486)
                      +.       .++.+|+.++ ..+. +  ..|++||+.+++.. .+......|..+. +|++.|+..+..     +..+||
T Consensus       316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly  394 (740)
T 4a5s_A          316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLY  394 (740)
T ss_dssp             SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEE
T ss_pred             EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEE
Confidence            32       3344688776 6654 3  45888898866654 4444455565554 587776655443     344555


Q ss_pred             eCC
Q psy9182         463 NLV  465 (486)
Q Consensus       463 dl~  465 (486)
                      .+.
T Consensus       395 ~v~  397 (740)
T 4a5s_A          395 KIQ  397 (740)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.51  E-value=3.6e-11  Score=111.00  Aligned_cols=281  Identities=16%  Similarity=0.082  Sum_probs=186.8

Q ss_pred             cccCCccCcceEEEeec-----CceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC--
Q psy9182         108 ISLLPNFDEKYIVSASG-----DRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS--  180 (486)
Q Consensus       108 ~~~~~s~~~~~l~tg~~-----dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s--  180 (486)
                      ...++.|+++.+.....     ++.|.+.|..+++.+.++..-..+ . ++++               +|++.++.++  
T Consensus        36 ~~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~s---------------pDG~~lyVan~~   98 (386)
T 3sjl_D           36 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVA---------------DDGSFIAHASTV   98 (386)
T ss_dssp             BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEEC---------------TTSSCEEEEEEE
T ss_pred             eeeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEEC---------------CCCCEEEEEccc
Confidence            34678899998888765     689999999999999888754444 3 7776               5666665554  


Q ss_pred             --------CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc------CCCccceEEEEeCCCE
Q psy9182         181 --------HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR------SENSKGVYCLQYDDHK  246 (486)
Q Consensus       181 --------~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~  246 (486)
                              .++.|.+||..+.....                            .+...      .+....-+.+++||++
T Consensus        99 ~~r~~~G~~~~~VsviD~~t~~v~~----------------------------~I~v~~g~r~~~g~~P~~~a~spDGk~  150 (386)
T 3sjl_D           99 FSRIARGERTDYVEVFDPVTLLPTA----------------------------DIELPDAPRFLVGTYPWMTSLTPDGKT  150 (386)
T ss_dssp             EEETTEEEEEEEEEEECTTTCCEEE----------------------------EEEETTCCCCCBSCCGGGEEECTTSSE
T ss_pred             ccccccCCCCCEEEEEECCCCeEEE----------------------------EEECCCccccccCCCCceEEEcCCCCE
Confidence                    36789999986644322                            11111      0223455788999999


Q ss_pred             EEEEec--CCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc----CccEE
Q psy9182         247 IVSGLR--DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH----CEAVL  318 (486)
Q Consensus       247 l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~----~~~i~  318 (486)
                      ++++..  ++.|.++|+.+++.+.++....  ...+.. ..+.+++.+.||.+.+.++.+ ++........    ...+.
T Consensus       151 lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~  228 (386)
T 3sjl_D          151 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI  228 (386)
T ss_dssp             EEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred             EEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccc
Confidence            988864  6899999999999999886432  122223 567777888999999999976 5553322111    11121


Q ss_pred             -EEEEc--CCeEEEEeCCCcEEEEECCCCCce--eeEEee---------ecCcccEEEEEeCCCEEEEEeC---------
Q psy9182         319 -HLRFS--NGMMVTCSKDRSIAVWDMVSPNEI--TLRRVL---------VGHRAAVNVVDFDEKYIVSASG---------  375 (486)
Q Consensus       319 -~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~---------~~~~~~v~~~~~~~~~l~~~~~---------  375 (486)
                       ...|.  .+.++..+.+|.|++.|+.+....  .....+         .........+..+++.++....         
T Consensus       229 ~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~  308 (386)
T 3sjl_D          229 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT  308 (386)
T ss_dssp             SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred             ccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence             13442  445666777899999999765421  111100         0112233455567777777642         


Q ss_pred             -CCcEEEEECCCceEEEEEcCCcccEEEEEe--CCC-EEEEEe-CCCcEEEEECCCCeeeEEecCc
Q psy9182         376 -DRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDR-LVVSGS-SDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       376 -d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                       .+.|.+.|+.+++.+..+.... .+..+.+  +++ +|++.. .++.|.++|..+++.+.++..-
T Consensus       309 ~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~  373 (386)
T 3sjl_D          309 ASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL  373 (386)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred             CCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence             2579999999999999887432 3434444  665 666654 5899999999999999888643

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.50  E-value=1.9e-11  Score=109.46  Aligned_cols=227  Identities=13%  Similarity=0.108  Sum_probs=150.8

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcc-cceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNY  193 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~  193 (486)
                      .+++|++++.|+.|.+||.++|+.+..+..+. ..+.++.+                                       
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~---------------------------------------   44 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA---------------------------------------   44 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE---------------------------------------
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE---------------------------------------
Confidence            45789999999999999999999887776554 23333333                                       


Q ss_pred             cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC
Q psy9182         194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH  273 (486)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  273 (486)
                                                                     .++|+.++  +.++.|..||. +++.+..+..+
T Consensus        45 -----------------------------------------------~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~   74 (276)
T 3no2_A           45 -----------------------------------------------TKAGEILF--SYSKGAKMITR-DGRELWNIAAP   74 (276)
T ss_dssp             -----------------------------------------------CTTSCEEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred             -----------------------------------------------CCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence                                                           34555555  34567888887 78888777754


Q ss_pred             c-ccEEEEEe--cCCEEEEEeC-CCcEEEEECCCCcEEEEecccC------ccEEEEEE--cCCeEEEEeCCCcEEEEEC
Q psy9182         274 T-GSVLCLQY--DERVIISGSS-DSTVRVWDVNTGEMVNTLIHHC------EAVLHLRF--SNGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       274 ~-~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~------~~i~~~~~--~~~~l~~~~~dg~i~i~d~  341 (486)
                      . ..+.++.+  +++.+++.+. ++.|..+|. +|+.+..+....      .....+.+  .++++++...++.|..||.
T Consensus        75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~  153 (276)
T 3no2_A           75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP  153 (276)
T ss_dssp             TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred             CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence            2 35666665  8889888877 778888886 677777664211      12222333  3458888888999999998


Q ss_pred             CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc------cEEEEEe--CCCEEE
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR------GIACLQY--RDRLVV  411 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------~v~~~~~--~~~~l~  411 (486)
                      . ++.+.....   . ....++..  +++.++++..++.|..+|..+++.+.++..+..      .+..+..  +|++++
T Consensus       154 ~-G~~~w~~~~---~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v  228 (276)
T 3no2_A          154 N-GQLLNSVKL---S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI  228 (276)
T ss_dssp             T-SCEEEEEEC---S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred             C-CCEEEEEEC---C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence            7 765432221   1 12222333  788999888888999999999999998864321      1444444  477776


Q ss_pred             EEeCC--------CcEEEEEC-CCCeeeEEecCc
Q psy9182         412 SGSSD--------NTIRLWDI-ECGACLRVLEGH  436 (486)
Q Consensus       412 ~~~~d--------g~v~iwd~-~~~~~~~~~~~h  436 (486)
                      +....        +..+++++ .+|+.+..+..+
T Consensus       229 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~  262 (276)
T 3no2_A          229 CNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK  262 (276)
T ss_dssp             EEECTTCTTGGGSCCCSEEEECTTSBEEEEECCT
T ss_pred             EeccCccccccccCCceEEEECCCCCEEEEecCc
Confidence            66421        23455655 567777777654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.50  E-value=2.2e-11  Score=110.01  Aligned_cols=234  Identities=10%  Similarity=0.125  Sum_probs=148.2

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceeeec------CcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN------GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~------~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..+.++++++++.++++...++.|.+||.. ++.+..+.      +|...+..+++.+              .++..+++
T Consensus        30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~--------------~~g~l~v~   94 (286)
T 1q7f_A           30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVR--------------NSGDIIVT   94 (286)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEET--------------TTTEEEEE
T ss_pred             CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEc--------------CCCeEEEE
Confidence            346677888999988888889999999987 66666653      2344567777731              23334444


Q ss_pred             CCC-CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEE
Q psy9182         179 SSH-DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIK  257 (486)
Q Consensus       179 ~s~-dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~  257 (486)
                      ... ++.|.+||.. +...                            ..+.........-+++.++++.+++...++.|.
T Consensus        95 ~~~~~~~i~~~d~~-g~~~----------------------------~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~  145 (286)
T 1q7f_A           95 ERSPTHQIQIYNQY-GQFV----------------------------RKFGATILQHPRGVTVDNKGRIIVVECKVMRVI  145 (286)
T ss_dssp             ECGGGCEEEEECTT-SCEE----------------------------EEECTTTCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred             cCCCCCEEEEECCC-CcEE----------------------------EEecCccCCCceEEEEeCCCCEEEEECCCCEEE
Confidence            433 7788888832 1111                            111111112223455667888777777889999


Q ss_pred             EEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc--CccEEEEEEcCC--eEEE
Q psy9182         258 VWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNG--MMVT  329 (486)
Q Consensus       258 i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~i~~~~~~~~--~l~~  329 (486)
                      +||.. ++.+..+.  .+...+.++++  +++++++...++.|++||. +++.+..+...  ...+..++++++  ++++
T Consensus       146 ~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~  223 (286)
T 1q7f_A          146 IFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIA  223 (286)
T ss_dssp             EECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred             EEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEE
Confidence            99954 55555554  34456788888  4666666677899999997 46666666443  356788998753  4555


Q ss_pred             EeCCC-cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCc
Q psy9182         330 CSKDR-SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       330 ~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                      ...++ .|.+||.. ++....... ......+..+++  +++++++ +.++.|++|+....
T Consensus       224 ~~~~~~~i~~~~~~-g~~~~~~~~-~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          224 DNHNNFNLTIFTQD-GQLISALES-KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             ECSSSCEEEEECTT-SCEEEEEEE-SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             eCCCCEEEEEECCC-CCEEEEEcc-cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence            55565 99999964 333322211 112223556666  6665555 67899999997654

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.49  E-value=8.6e-12  Score=115.04  Aligned_cols=269  Identities=12%  Similarity=0.070  Sum_probs=172.3

Q ss_pred             ecCceeeecccccccceeeecC------cccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccccc
Q psy9182         123 SGDRTIKVWNTSSCEFVRTLNG------HKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET  196 (486)
Q Consensus       123 ~~dg~v~iWd~~~~~~~~~l~~------h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~  196 (486)
                      +.+++|.++|..+++....+..      .......+.+.                ++..+++...++.|.+||..+.+..
T Consensus        14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~----------------~~~lyv~~~~~~~v~viD~~t~~~~   77 (328)
T 3dsm_A           14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR----------------DGIGWIVVNNSHVIFAIDINTFKEV   77 (328)
T ss_dssp             SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE----------------TTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred             CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE----------------CCEEEEEEcCCCEEEEEECcccEEE
Confidence            3489999999999987665421      11223455553                3334455556789999997654321


Q ss_pred             ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCCeEEEEECCCceeeEEEcCCc-
Q psy9182         197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDNTIKVWDRVSLQCIKVLTGHT-  274 (486)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-  274 (486)
                                                  ..+.  ......-+++++++ .++++. .++.|.+||..+++....+.... 
T Consensus        78 ----------------------------~~i~--~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~  126 (328)
T 3dsm_A           78 ----------------------------GRIT--GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDM  126 (328)
T ss_dssp             ----------------------------EEEE--CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTC
T ss_pred             ----------------------------EEcC--CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCc
Confidence                                        1121  11223345566777 455554 78999999999999887776433 


Q ss_pred             ----ccEEEEEecCCEEEEEe--CCCcEEEEECCCCcEEEEecccCccEEEEEEcC-CeEEEEeC-C----------CcE
Q psy9182         275 ----GSVLCLQYDERVIISGS--SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSK-D----------RSI  336 (486)
Q Consensus       275 ----~~v~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~-d----------g~i  336 (486)
                          .....+.+++..++++.  .++.|.++|+.+++.+..+.... ....+.+++ +.+++++. +          +.|
T Consensus       127 ~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v  205 (328)
T 3dsm_A          127 DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSL  205 (328)
T ss_dssp             CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred             cccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceE
Confidence                13445555666666665  48899999999999888776532 345667765 35555443 3          689


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE--EcCCcccEEEEEeC---CCE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT--LNGHKRGIACLQYR---DRL  409 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~---~~~  409 (486)
                      .++|..+++......  .........+++  ++++++++..  .|.+||..+++....  +.........+.++   +.+
T Consensus       206 ~~id~~t~~v~~~~~--~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~l  281 (328)
T 3dsm_A          206 YRIDAETFTVEKQFK--FKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEV  281 (328)
T ss_dssp             EEEETTTTEEEEEEE--CCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCE
T ss_pred             EEEECCCCeEEEEEe--cCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeE
Confidence            999998776442222  111224566776  5788888755  899999998875421  12223456677774   455


Q ss_pred             EEEE----eCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         410 VVSG----SSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       410 l~~~----~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      .++.    ..++.|.+||.. |+.+..+.. ......++|
T Consensus       282 yva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~  319 (328)
T 3dsm_A          282 YVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCW  319 (328)
T ss_dssp             EEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred             EEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEE
Confidence            6665    578999999998 998888763 233455555

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.49  E-value=4e-12  Score=120.61  Aligned_cols=286  Identities=14%  Similarity=0.015  Sum_probs=164.7

Q ss_pred             ccccCCccCcceEEEeecC---ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         107 FISLLPNFDEKYIVSASGD---RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~d---g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      +....++|||++|+.....   ..|.+||+.+++......++......+.|+               +|++.|+.++.++
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~s---------------pdg~~l~~~~~~~  102 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIS---------------TDERAFFYVKNEL  102 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEEC---------------TTSSEEEEEETTT
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceEC---------------CCCCEEEEEEcCC
Confidence            6677899999998876443   478888998887554444333223335565               6778888888888


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccc-----eEEEEeCCCEEEEE-----ecC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKG-----VYCLQYDDHKIVSG-----LRD  253 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~l~~~-----~~d  253 (486)
                      .|.+||+.++..........            .|....   ..+.........     ...++++++.++..     ..+
T Consensus       103 ~l~~~d~~~~~~~~~~~~~~------------~~~~~g---~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~  167 (396)
T 3c5m_A          103 NLMKVDLETLEEQVIYTVDE------------EWKGYG---TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPT  167 (396)
T ss_dssp             EEEEEETTTCCEEEEEECCT------------TEEEEE---EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCC
T ss_pred             cEEEEECCCCCcEEEEeccc------------ccCCCC---CEEEeccCCccccccccccccCCCCcceeeeeeccCCCc
Confidence            89999986644322211110            010000   000000000000     01234566665543     356


Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEe---cCCEEEEEeCC------CcEEEEECCCCcEEEEeccc--CccEEEEEE
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVIISGSSD------STVRVWDVNTGEMVNTLIHH--CEAVLHLRF  322 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~--~~~i~~~~~  322 (486)
                      ..|.+||+.+++..... .+...+..+.|   +++.++..+.+      ..|.+||+.+++... +..+  ...+..+.|
T Consensus       168 ~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~  245 (396)
T 3c5m_A          168 CRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFW  245 (396)
T ss_dssp             EEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEE
T ss_pred             ceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEE
Confidence            68999999988765554 35556766666   46666665543      368899987665433 3222  235777889


Q ss_pred             cCC--eEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEe----------------CCCc
Q psy9182         323 SNG--MMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSAS----------------GDRT  378 (486)
Q Consensus       323 ~~~--~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~----------------~d~~  378 (486)
                      +++  .++.++.+     +.|++||+.+++..... ...+.  . ..... ++++++.++                .+..
T Consensus       246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~  321 (396)
T 3c5m_A          246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMPPC--S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF  321 (396)
T ss_dssp             CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECCSE--E-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred             CCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCCCC--C-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence            864  55555433     44999999887643221 11221  1 34455 888888754                3478


Q ss_pred             EEEEECCCceEEEEEcCCccc-----------EE--EEEeCCCEEEEEeC-CCcEE--EEECCCCee
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRG-----------IA--CLQYRDRLVVSGSS-DNTIR--LWDIECGAC  429 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~-----------v~--~~~~~~~~l~~~~~-dg~v~--iwd~~~~~~  429 (486)
                      |++||+.+++.. .+..+...           +.  .++.+++.|+.++. ++...  ++++.+++.
T Consensus       322 i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~  387 (396)
T 3c5m_A          322 LYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK  387 (396)
T ss_dssp             EEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred             EEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence            999999887653 34433331           22  34446887777664 45544  445555544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.48  E-value=1.1e-11  Score=114.39  Aligned_cols=291  Identities=11%  Similarity=-0.024  Sum_probs=186.3

Q ss_pred             cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccc
Q psy9182         116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSE  195 (486)
Q Consensus       116 ~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~  195 (486)
                      +..|..++.++.|..|| .+++.+..+..+...+.++...                .+..++.++.+  +..+|. ++..
T Consensus        30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~----------------~~g~l~v~t~~--l~~~d~-~g~~   89 (330)
T 3hxj_A           30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIG----------------KDGTIYFGSDK--VYAINP-DGTE   89 (330)
T ss_dssp             TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEET----------------TTTEECCSSCE--EEEECC-CGGG
T ss_pred             CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEe----------------cCCcEEEecCc--EEEECC-CCcE
Confidence            33677778889999999 8888776665444444444442                12234444444  666664 2222


Q ss_pred             cccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcc
Q psy9182         196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG  275 (486)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  275 (486)
                      ........                             .......+  .+..+.+++.++.|..+|.. ++.......+..
T Consensus        90 ~~~~~~~~-----------------------------~~~~~~~~--~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~  137 (330)
T 3hxj_A           90 KWRFDTKK-----------------------------AIVSDFTI--FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKA  137 (330)
T ss_dssp             GGGSCC----------------------------------CCEEE--ETTEEEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred             EEEEECCC-----------------------------CcccCceE--ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCc
Confidence            11111000                             00011112  26678888889999999988 777766665555


Q ss_pred             cEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEee
Q psy9182         276 SVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVL  353 (486)
Q Consensus       276 ~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  353 (486)
                      .+.++..+ +..++.++.++.|..+|.. ++....+......+.++... ++.+++++  +.|..+| .+++...   ..
T Consensus       138 ~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~---~~  210 (330)
T 3hxj_A          138 IYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKW---NF  210 (330)
T ss_dssp             CCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEE---EE
T ss_pred             eeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEE---EE
Confidence            45555553 4557778888999999998 88777776555566666674 56777777  8899999 5554332   12


Q ss_pred             ecCcccEEEEEeCC-CEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeE
Q psy9182         354 VGHRAAVNVVDFDE-KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLR  431 (486)
Q Consensus       354 ~~~~~~v~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~  431 (486)
                      ......+.++..++ ..+..++.++.|..+|. +++.+..+......+..+..+ +..|..++.+|.|..+|. +++.+.
T Consensus       211 ~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~  288 (330)
T 3hxj_A          211 YAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW  288 (330)
T ss_dssp             CCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEE
T ss_pred             ccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEE
Confidence            22334455666643 36777778888999984 566666665444433444444 667888888999999996 688777


Q ss_pred             EecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         432 VLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       432 ~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+......+.++.. .+..|..++.+|.+++...+..
T Consensus       289 ~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~  325 (330)
T 3hxj_A          289 NFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH  325 (330)
T ss_dssp             EEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred             EEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence            77665666777777 5566888999999999887644

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.47  E-value=5.8e-10  Score=104.29  Aligned_cols=280  Identities=8%  Similarity=-0.043  Sum_probs=173.4

Q ss_pred             CCccCcceEEEeec--Cc---eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC-----
Q psy9182         111 LPNFDEKYIVSASG--DR---TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS-----  180 (486)
Q Consensus       111 ~~s~~~~~l~tg~~--dg---~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s-----  180 (486)
                      .+.|+++++.....  ..   .|.++|..+++.+.++.....+  .++++               +|++.++.+.     
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~s---------------pDg~~lyv~n~~~~~   89 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAA---------------HSGSEFALASTSFSR   89 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEEC---------------CCCCEEEEEeccccc
Confidence            55678887777654  33   8899999999988887654433  66665               4665555553     


Q ss_pred             -----CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec--C
Q psy9182         181 -----HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR--D  253 (486)
Q Consensus       181 -----~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--d  253 (486)
                           .++.|.+||..+.+.........                 .   .+  ........-+.++++|++|+++..  +
T Consensus        90 ~~rg~~~~~v~viD~~t~~~~~~i~~~~-----------------~---~~--~~~g~~p~~~~~spDG~~l~v~n~~~~  147 (373)
T 2mad_H           90 IAKGKRTDYVEVFDPVTFLPIADIELPD-----------------A---PR--FDVGPYSWMNANTPNNADLLFFQFAAG  147 (373)
T ss_pred             cccCCCCCeEEEEECCCCcEEEEEECCC-----------------c---cc--cccCCCccceEECCCCCEEEEEecCCC
Confidence                 36789999975543222111000                 0   00  000112235678999999998874  5


Q ss_pred             CeEEEEECCCceeeEE-EcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec-----ccCccE-EEEEEc--C
Q psy9182         254 NTIKVWDRVSLQCIKV-LTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI-----HHCEAV-LHLRFS--N  324 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----~~~~~i-~~~~~~--~  324 (486)
                      +.|.++| .+++.+.. +... ..+.........+++.+.||.+.++|. +++......     ....++ ....+.  +
T Consensus       148 ~~v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~  224 (373)
T 2mad_H          148 PAVGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS  224 (373)
T ss_pred             CeEEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence            7899999 99998877 6532 222222224456677788999999999 887764322     111121 122222  3


Q ss_pred             CeEEEEeCCCcEEEEECCCCCceeeEEe--ee---------cCcccEEEEEeCCCEEEEEeC----------CCcEEEEE
Q psy9182         325 GMMVTCSKDRSIAVWDMVSPNEITLRRV--LV---------GHRAAVNVVDFDEKYIVSASG----------DRTIKVWN  383 (486)
Q Consensus       325 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~---------~~~~~v~~~~~~~~~l~~~~~----------d~~i~iwd  383 (486)
                      +.++..+.++.+.+.|+...........  ..         ........+..+++.++++..          .+.|.++|
T Consensus       225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID  304 (373)
T 2mad_H          225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT  304 (373)
T ss_pred             CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence            3444445778999999876532111110  00         011112334447777777643          35799999


Q ss_pred             CCCceEEEEEcCCcccEEEEEe--CCC-EEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182         384 TSSCEFVRTLNGHKRGIACLQY--RDR-LVVSGS-SDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       384 ~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~  433 (486)
                      ..+++.+.++.... ....+.+  +++ +++++. .++.|.++|+.+++.+..+
T Consensus       305 ~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          305 GLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence            99999999886433 3444444  677 677776 5899999999999998874

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.47  E-value=1.4e-10  Score=118.89  Aligned_cols=227  Identities=13%  Similarity=0.087  Sum_probs=151.8

Q ss_pred             EEEEeCCCEEEEEecCC-----eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCc---------------
Q psy9182         238 YCLQYDDHKIVSGLRDN-----TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDST---------------  295 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~---------------  295 (486)
                      .+++|||++|+.+..++     .|++||+.+++.......+ ..+..++|  |++.|+.++.++.               
T Consensus       130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~  208 (710)
T 2xdw_A          130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ  208 (710)
T ss_dssp             EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred             EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence            46778999888776543     8999999999877643222 22445666  8899998888766               


Q ss_pred             -EEEEECCCCcE----EEEecccCccEEEEEEcCC--eEEEEeC-----CCcEEEEECCC------CC-ceeeEEeeecC
Q psy9182         296 -VRVWDVNTGEM----VNTLIHHCEAVLHLRFSNG--MMVTCSK-----DRSIAVWDMVS------PN-EITLRRVLVGH  356 (486)
Q Consensus       296 -i~vwd~~~~~~----~~~~~~~~~~i~~~~~~~~--~l~~~~~-----dg~i~i~d~~~------~~-~~~~~~~~~~~  356 (486)
                       |++|++.+++.    +.....+...+..+.++++  .++.++.     +..|++||+.+      +. ..   ..+..+
T Consensus       209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~---~~l~~~  285 (710)
T 2xdw_A          209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW---VKLIDN  285 (710)
T ss_dssp             EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC---EEEECS
T ss_pred             EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce---EEeeCC
Confidence             99999988762    2222334455778888865  5655543     57899999976      42 12   222233


Q ss_pred             cccE-EEEEeCCCEEEEEeCC----CcEEEEECCCce--EEEEEcCCcc--cEEEEEeC--CCEEEEEeCCCc--EEEEE
Q psy9182         357 RAAV-NVVDFDEKYIVSASGD----RTIKVWNTSSCE--FVRTLNGHKR--GIACLQYR--DRLVVSGSSDNT--IRLWD  423 (486)
Q Consensus       357 ~~~v-~~~~~~~~~l~~~~~d----~~i~iwd~~~~~--~~~~~~~~~~--~v~~~~~~--~~~l~~~~~dg~--v~iwd  423 (486)
                      ...+ ..+..+|+.|+..+..    +.|.+||+.++.  ....+..|..  .+..+.+.  +.++++...|+.  |.+||
T Consensus       286 ~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~  365 (710)
T 2xdw_A          286 FEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHD  365 (710)
T ss_dssp             SSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEE
T ss_pred             CCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEE
Confidence            3333 3345578877766553    369999998764  2344444443  56666664  456777777874  66678


Q ss_pred             CCCCeeeEEecCcccCeEEEEe--cCCEEEEE-e---CCCcEEEEeCCCCC
Q psy9182         424 IECGACLRVLEGHEELVRCIRF--DAKRIVSG-A---YDGKIKVWNLVAAL  468 (486)
Q Consensus       424 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~-~---~dg~v~iwdl~~~~  468 (486)
                      +.+|+.+..+..+...+..+.+  +++.++.. +   ..++|..||+.++.
T Consensus       366 ~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          366 LATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             TTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            7778888888888778888888  66655533 3   35789999998764

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.45  E-value=1.5e-10  Score=113.83  Aligned_cols=264  Identities=13%  Similarity=0.141  Sum_probs=177.8

Q ss_pred             CcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe
Q psy9182         172 DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL  251 (486)
Q Consensus       172 ~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  251 (486)
                      ++..+++...+++|.++|..+.+..                            ..+..  +.....+.++++++++++++
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~----------------------------~~i~~--g~~p~~v~~SpDGr~lyv~~  215 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIK----------------------------TVLDT--GYAVHISRLSASGRYLFVIG  215 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEE----------------------------EEEEC--SSCEEEEEECTTSCEEEEEE
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEE----------------------------EEEeC--CCCccceEECCCCCEEEEEc
Confidence            3456777888999999997654322                            22221  11223567889999999999


Q ss_pred             cCCeEEEEECC--CceeeEEEcCCcccE-EEEE----ecCCEEEEEeC-CCcEEEEECCCCcEEEEeccc----------
Q psy9182         252 RDNTIKVWDRV--SLQCIKVLTGHTGSV-LCLQ----YDERVIISGSS-DSTVRVWDVNTGEMVNTLIHH----------  313 (486)
Q Consensus       252 ~dg~i~i~d~~--~~~~~~~~~~~~~~v-~~~~----~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~----------  313 (486)
                      .++.|.+||+.  +++.+..+.....+. ..++    .||+++++++. ++.|.++|..+.+.+..+...          
T Consensus       216 ~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~  295 (567)
T 1qks_A          216 RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH  295 (567)
T ss_dssp             TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred             CCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccccc
Confidence            99999999995  788887776543332 3344    36788777665 599999999999998876432          


Q ss_pred             -CccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCC
Q psy9182         314 -CEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSS  386 (486)
Q Consensus       314 -~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~  386 (486)
                       ...+..+..+++   .++....+|.|.++|....+.......  ........+.|  ++++++++. .++.|.++|+.+
T Consensus       296 p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t  373 (567)
T 1qks_A          296 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE  373 (567)
T ss_dssp             SCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred             CCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence             125666766643   556666789999999987654432222  12223344455  788877665 578999999999


Q ss_pred             ceEEEEEcC-----Ccc-cEEEEEeC-CCEEEEEe-CCCcEEEEECCC-------CeeeEEecCcccCeEEEEe--cCCE
Q psy9182         387 CEFVRTLNG-----HKR-GIACLQYR-DRLVVSGS-SDNTIRLWDIEC-------GACLRVLEGHEELVRCIRF--DAKR  449 (486)
Q Consensus       387 ~~~~~~~~~-----~~~-~v~~~~~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~--~~~~  449 (486)
                      ++.+..+..     |.+ .+.-+..+ +...+++. .++.|.++|..+       .+.++.+......-..|..  ++++
T Consensus       374 ~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~  453 (567)
T 1qks_A          374 GKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY  453 (567)
T ss_dssp             TEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred             CcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence            998877764     332 33323444 34444443 468999999987       6677887765333233444  8888


Q ss_pred             EEEEeC-------CCcEEEEeCCCC
Q psy9182         450 IVSGAY-------DGKIKVWNLVAA  467 (486)
Q Consensus       450 l~s~~~-------dg~v~iwdl~~~  467 (486)
                      |.+...       .+.|.++|+.+.
T Consensus       454 l~v~~~~~~~~~~~~~v~v~d~~~~  478 (567)
T 1qks_A          454 LYVDATLNPEAEISGSVAVFDIKAM  478 (567)
T ss_dssp             EEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred             EEEecCCCCCcccCceEEEEECCcc
Confidence            887663       458999999865

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.43  E-value=1.8e-10  Score=106.10  Aligned_cols=217  Identities=11%  Similarity=0.027  Sum_probs=148.2

Q ss_pred             EeCCCE-EEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEe-CCCcEEEEECCCCcEEEEecccC--
Q psy9182         241 QYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS-SDSTVRVWDVNTGEMVNTLIHHC--  314 (486)
Q Consensus       241 ~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~--  314 (486)
                      ..++.. +++...++.|.+||..+++.+..+.. ......+++  ++ .++++. .++.|.+||..+++....+....  
T Consensus        50 ~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~  127 (328)
T 3dsm_A           50 VIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMD  127 (328)
T ss_dssp             EEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCC
T ss_pred             EEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCcc
Confidence            334444 45555578999999999999888863 345666766  55 566555 78999999999998887765433  


Q ss_pred             ---ccEEEEEEcCCeEEEEe--CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC----------C
Q psy9182         315 ---EAVLHLRFSNGMMVTCS--KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD----------R  377 (486)
Q Consensus       315 ---~~i~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d----------~  377 (486)
                         .....+++.++.++++.  .++.|.++|+.+++.......  +.  ....+.+  +|++++++..+          +
T Consensus       128 ~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~--g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~  203 (328)
T 3dsm_A          128 MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI--GI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAP  203 (328)
T ss_dssp             TTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC--SS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred             ccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--CC--CccceEEcCCCCEEEEECCCccCCccccCCc
Confidence               13445566777777776  488999999998765432221  21  2233444  67766666554          7


Q ss_pred             cEEEEECCCceEEEEEcCC-cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE--ecCcccCeEEEEec--CCEE
Q psy9182         378 TIKVWNTSSCEFVRTLNGH-KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRFD--AKRI  450 (486)
Q Consensus       378 ~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~--~~~l  450 (486)
                      .|.++|..+++....+... ......++++  ++.|.++..  .|.+||..+++....  +..+......++++  +..|
T Consensus       204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~l  281 (328)
T 3dsm_A          204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEV  281 (328)
T ss_dssp             EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCE
T ss_pred             eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeE
Confidence            8999999999988777643 2356677775  778777654  899999988875421  22223567888883  4444


Q ss_pred             -EEE----eCCCcEEEEeCC
Q psy9182         451 -VSG----AYDGKIKVWNLV  465 (486)
Q Consensus       451 -~s~----~~dg~v~iwdl~  465 (486)
                       ++.    ..++.|.+||.+
T Consensus       282 yva~~~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          282 YVADAIDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             EEEECTTSSSEEEEEEECTT
T ss_pred             EEEcccccccCCEEEEECCC
Confidence             444    468899999987

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.41  E-value=8.9e-11  Score=120.29  Aligned_cols=251  Identities=12%  Similarity=0.090  Sum_probs=150.3

Q ss_pred             cccccCCccCcceEEEeecCc-----eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         106 DFISLLPNFDEKYIVSASGDR-----TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg-----~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      .+....+||||++||.+..++     .|++||+.+++.+.....+. .+..++|+               +|++.|+.++
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~ws---------------pDg~~l~~~~  189 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWT---------------HDGKGMFYNA  189 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEEC---------------TTSSEEEEEE
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEE---------------eCCCEEEEEE
Confidence            355678899999998765543     89999999988765332222 24556665               3444454444


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .++.-.       ...     .                              ..        ..     ......|++|+
T Consensus       190 ~~~~~~-------~~~-----~------------------------------~~--------~~-----~~~~~~v~~~~  214 (710)
T 2xdw_A          190 YPQQDG-------KSD-----G------------------------------TE--------TS-----TNLHQKLYYHV  214 (710)
T ss_dssp             CCCCSS-------CCS-----S------------------------------SC--------CC-----CCCCCEEEEEE
T ss_pred             ECCccc-------ccc-----c------------------------------cc--------cc-----cCCCCEEEEEE
Confidence            332100       000     0                              00        00     01234588888


Q ss_pred             CCCcee--eEEEc--CCcccEEEEEe--cCCEEEEEeC-----CCcEEEEECCC------Cc-EEEEecccCccEEE-EE
Q psy9182         261 RVSLQC--IKVLT--GHTGSVLCLQY--DERVIISGSS-----DSTVRVWDVNT------GE-MVNTLIHHCEAVLH-LR  321 (486)
Q Consensus       261 ~~~~~~--~~~~~--~~~~~v~~~~~--~~~~l~~~~~-----dg~i~vwd~~~------~~-~~~~~~~~~~~i~~-~~  321 (486)
                      +.+++.  ...+.  .|...+..+.+  |+++|+.++.     +..|++||+.+      +. ....+..+...+.. +.
T Consensus       215 l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s  294 (710)
T 2xdw_A          215 LGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVT  294 (710)
T ss_dssp             TTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEE
T ss_pred             CCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEe
Confidence            877652  22223  24445666666  8888887764     56899999976      43 34455444444433 33


Q ss_pred             EcCCeEEEEeCC----CcEEEEECCCCCceeeEEeeecCc--ccEEEEEe--CCCEEEEEeCCCc--EEEEECCCceEEE
Q psy9182         322 FSNGMMVTCSKD----RSIAVWDMVSPNEITLRRVLVGHR--AAVNVVDF--DEKYIVSASGDRT--IKVWNTSSCEFVR  391 (486)
Q Consensus       322 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~--~~v~~~~~--~~~~l~~~~~d~~--i~iwd~~~~~~~~  391 (486)
                      ..++.++..+..    +.|.+||+.++..... ..+..+.  ..+..+.+  ++.++++...++.  |.+||+.+++.+.
T Consensus       295 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~  373 (710)
T 2xdw_A          295 NEGTVFTFKTNRHSPNYRLINIDFTDPEESKW-KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLK  373 (710)
T ss_dssp             EETTEEEEEECTTCTTCEEEEEETTSCCGGGC-EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred             ccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEE
Confidence            345666655543    3699999987642111 2222332  25666776  3456667777774  6677887788888


Q ss_pred             EEcCCcccEEEEEeC--CCEEE-EEe---CCCcEEEEECCCCe
Q psy9182         392 TLNGHKRGIACLQYR--DRLVV-SGS---SDNTIRLWDIECGA  428 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~--~~~l~-~~~---~dg~v~iwd~~~~~  428 (486)
                      .+..+...+..+.++  +..++ +.+   ..+.|+.||+.+++
T Consensus       374 ~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          374 IFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            888887778888774  55544 333   35789999998877

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.40  E-value=2.3e-10  Score=103.90  Aligned_cols=219  Identities=10%  Similarity=0.031  Sum_probs=147.9

Q ss_pred             ceEEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182         236 GVYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       236 ~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      .-.+++++++ .++++..++.|..||..++  ...+..+...+.++.+  +++++++...++.|.+||..+++.......
T Consensus        31 eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~  108 (296)
T 3e5z_A           31 EGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADS  108 (296)
T ss_dssp             EEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECE
T ss_pred             cCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeec
Confidence            4456778888 7888888999999999887  5666667777888888  677777666678999999988876544322


Q ss_pred             c----CccEEEEEEcCC--eEEE----Ee-------------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CC
Q psy9182         313 H----CEAVLHLRFSNG--MMVT----CS-------------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DE  367 (486)
Q Consensus       313 ~----~~~i~~~~~~~~--~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~  367 (486)
                      .    ...+..++++++  ++++    |+             ..+.|..++.. ++ .   .....+......+.+  ++
T Consensus       109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~---~~~~~~~~~~~gi~~s~dg  183 (296)
T 3e5z_A          109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-L---SAPIRDRVKPNGLAFLPSG  183 (296)
T ss_dssp             ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-E---EEEECCCSSEEEEEECTTS
T ss_pred             cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-E---EEeecCCCCCccEEECCCC
Confidence            1    123456777654  4443    22             13456666654 32 2   222344455566777  78


Q ss_pred             CEEEEEeCCCcEEEEECC-CceE---EEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         368 KYIVSASGDRTIKVWNTS-SCEF---VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       368 ~~l~~~~~d~~i~iwd~~-~~~~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      +.+++.+.++.|.+||+. +++.   ...+..+...+..+.+  +|++.++.  ++.|.+||.. ++.+..+..+.. ++
T Consensus       184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~  259 (296)
T 3e5z_A          184 NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TS  259 (296)
T ss_dssp             CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CC
T ss_pred             CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ce
Confidence            888777778999999986 4554   3334333444555666  46655555  8899999987 888888887777 89


Q ss_pred             EEEe---cCCEEEEEeCCCcEEEEeCCC
Q psy9182         442 CIRF---DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       442 ~~~~---~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      +++|   +++.|++++.++ +.-++..+
T Consensus       260 ~~~f~~~d~~~L~v~t~~~-l~~~~~~~  286 (296)
T 3e5z_A          260 NLCFGGPEGRTLYMTVSTE-FWSIETNV  286 (296)
T ss_dssp             EEEEESTTSCEEEEEETTE-EEEEECSC
T ss_pred             eEEEECCCCCEEEEEcCCe-EEEEEccc
Confidence            9999   556788888764 44445443

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.39  E-value=3.4e-09  Score=96.02  Aligned_cols=271  Identities=7%  Similarity=-0.007  Sum_probs=164.5

Q ss_pred             ccccccCCccCcceEEEeecCceeeecccccccceee-ecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDD  183 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~-l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg  183 (486)
                      ..+.+++++++|.+.++...++.|.+||.. ++.... +..+...+..++++               +++..+++...++
T Consensus        15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~---------------~~g~l~v~~~~~~   78 (299)
T 2z2n_A           15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTIS---------------SDGEVWFTENAAN   78 (299)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEEC---------------TTSCEEEEETTTT
T ss_pred             CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEEC---------------CCCCEEEeCCCCC
Confidence            456778888999888777668899999988 554322 22344567777775               3444555555567


Q ss_pred             cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEec-cCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         184 TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINC-RSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       184 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                      .|..||... ..                             ..+.. ........+++.+++.++++...++.|.+||. 
T Consensus        79 ~i~~~~~~g-~~-----------------------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-  127 (299)
T 2z2n_A           79 KIGRITKKG-II-----------------------------KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-  127 (299)
T ss_dssp             EEEEECTTS-CE-----------------------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred             eEEEECCCC-cE-----------------------------EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-
Confidence            787887531 10                             00000 01112223444556777777667889999998 


Q ss_pred             CceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-ecccCccEEEEEEcC-CeEEEEe-CCCcE
Q psy9182         263 SLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-LIHHCEAVLHLRFSN-GMMVTCS-KDRSI  336 (486)
Q Consensus       263 ~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~i~~~~~~~-~~l~~~~-~dg~i  336 (486)
                      +++.... ...+...+.++.+  +++..++...++.|..||. +++.... .......+..+++++ +.++++. .++.|
T Consensus       128 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i  206 (299)
T 2z2n_A          128 DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKI  206 (299)
T ss_dssp             TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred             CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceE
Confidence            5544432 2334456778877  4666666666789999999 6765543 333345678888875 3455544 57889


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE-EcCCcccEEEEEeCCCEEEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYRDRLVVSG  413 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~  413 (486)
                      ..||. +++...  .........+..+.+  +|+..++...++.|..||. +++.... +..+...+.++.+.+..+..+
T Consensus       207 ~~~~~-~g~~~~--~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v~  282 (299)
T 2z2n_A          207 GRITT-SGEITE--FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWFA  282 (299)
T ss_dssp             EEECT-TCCEEE--EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEEE
T ss_pred             EEECC-CCcEEE--EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEEE
Confidence            99998 554321  122334456777877  5665555556789999998 4543222 234445566666543334444


Q ss_pred             eCCCcEEEEECCCC
Q psy9182         414 SSDNTIRLWDIECG  427 (486)
Q Consensus       414 ~~dg~v~iwd~~~~  427 (486)
                      ...+.|..++.+++
T Consensus       283 ~~~~~l~~~~~~~~  296 (299)
T 2z2n_A          283 MECDKIGKLTLIKD  296 (299)
T ss_dssp             ETTTEEEEEEEC--
T ss_pred             ecCCcEEEEEcCcc
Confidence            44677777777654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.39  E-value=9.7e-11  Score=104.70  Aligned_cols=228  Identities=7%  Similarity=-0.071  Sum_probs=144.6

Q ss_pred             eEEEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         237 VYCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       237 v~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      -+++.++++.++ +...++.|.+||..+.........+...+.++++  +++++++.. ++.|.+||.............
T Consensus        28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~  106 (270)
T 1rwi_B           28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDG  106 (270)
T ss_dssp             EEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCS
T ss_pred             ceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCC
Confidence            345566787666 4467889999997665433222223345666777  566555544 889999998765443222223


Q ss_pred             CccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182         314 CEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       314 ~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ...+..++++++  .+++...++.|.+|+..+.....   ........+..+.+  +++++++...++.|.+||......
T Consensus       107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~  183 (270)
T 1rwi_B          107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ  183 (270)
T ss_dssp             CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE---CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred             cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe---eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence            356788888743  44444567899999765543221   11122234455665  677666666778999999887665


Q ss_pred             EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       390 ~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ......+...+..+.++  +.++++...++.|.+||............+...+.++++  +|+.+++...++.|+++++.
T Consensus       184 ~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~  263 (270)
T 1rwi_B          184 VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL  263 (270)
T ss_dssp             EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence            44333343567778875  566666667889999998765443322233456889999  67778888889999999987


Q ss_pred             CCC
Q psy9182         466 AAL  468 (486)
Q Consensus       466 ~~~  468 (486)
                      ...
T Consensus       264 ~~~  266 (270)
T 1rwi_B          264 EHH  266 (270)
T ss_dssp             GGG
T ss_pred             Ccc
Confidence            543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.38  E-value=7e-09  Score=93.92  Aligned_cols=221  Identities=10%  Similarity=-0.022  Sum_probs=140.0

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceee-EEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-eccc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCI-KVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-LIHH  313 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~  313 (486)
                      +++.+++..+++...++.|..||.. ++.. ..+......+.++.+  ++.++++...++.|..||. +++.... ....
T Consensus        62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~  139 (299)
T 2z2n_A           62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK  139 (299)
T ss_dssp             EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred             EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence            4455677777776668899999976 3322 122224456778887  4666666667789999998 5654432 2333


Q ss_pred             CccEEEEEEcCC-eEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE
Q psy9182         314 CEAVLHLRFSNG-MMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       314 ~~~i~~~~~~~~-~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ...+..+++.++ .++++ ..++.|..||. +++...  .........+..+.+  ++++.++...++.|.+||. +++.
T Consensus       140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~  215 (299)
T 2z2n_A          140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI  215 (299)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred             CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE
Confidence            456788888753 45544 45689999998 554321  112233445667777  5676666656789999999 6664


Q ss_pred             EEE-EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeC
Q psy9182         390 VRT-LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       390 ~~~-~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl  464 (486)
                      ... ...+...+..+.++  +++.++...++.|..||. +++.... +..+...+.++++ +++..+ +...+.|..++.
T Consensus       216 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~g~l~v-~~~~~~l~~~~~  293 (299)
T 2z2n_A          216 TEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICFDGETIWF-AMECDKIGKLTL  293 (299)
T ss_dssp             EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEECSSCEEE-EETTTEEEEEEE
T ss_pred             EEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEecCCCEEE-EecCCcEEEEEc
Confidence            332 23345667788875  565555557889999998 4553322 3344567888888 444444 444667777776


Q ss_pred             CC
Q psy9182         465 VA  466 (486)
Q Consensus       465 ~~  466 (486)
                      .+
T Consensus       294 ~~  295 (299)
T 2z2n_A          294 IK  295 (299)
T ss_dssp             C-
T ss_pred             Cc
Confidence            64

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.38  E-value=1.7e-10  Score=107.20  Aligned_cols=258  Identities=11%  Similarity=0.127  Sum_probs=148.5

Q ss_pred             ccccccCCccCcceEEEeecC---c--eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         105 RDFISLLPNFDEKYIVSASGD---R--TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~d---g--~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      ..+....++|||++|+..+.+   +  .|.+||+.+++.......+.  +..++|+               +|++.|+.+
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~ws---------------pdg~~l~~~  121 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWN---------------EDSRKLLIV  121 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEEC---------------TTSSEEEEE
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeEC---------------CCCCEEEEE
Confidence            346677899999999987654   2  48888888877655444333  8888886               455555554


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                      +.+..       . ....                        .....           ..+..++..+. ......|.+|
T Consensus       122 ~~~~~-------~-~~~~------------------------~~~~~-----------~~~~~~g~~~~-~~~~~~l~~~  157 (347)
T 2gop_A          122 GFKRR-------E-DEDF------------------------IFEDD-----------VPAWFDDLGFF-DGEKTTFWIF  157 (347)
T ss_dssp             EECCC-------C---------------------------------------------CCCC----------CEEEEEEE
T ss_pred             EccCC-------C-cCCc------------------------EEEcc-----------cceeecCcccc-cCccceEEEE
Confidence            43210       0 0000                        00000           00001111111 1224578999


Q ss_pred             ECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC-------cEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEE
Q psy9182         260 DRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS-------TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTC  330 (486)
Q Consensus       260 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~  330 (486)
                      |+.+++.+..+.. . .+..+.|  ++ +++++..++       ...+|.+.+++. ..+..+ ..+..+..++..++.+
T Consensus       158 d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~  232 (347)
T 2gop_A          158 DTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLY  232 (347)
T ss_dssp             ETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEE
T ss_pred             ECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEE
Confidence            9998887444443 3 5666666  66 777765542       334444335544 334333 4555554445567666


Q ss_pred             eCC--------CcEEEEECCCCCceeeEEeeecCcccEEE-EEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE
Q psy9182         331 SKD--------RSIAVWDMVSPNEITLRRVLVGHRAAVNV-VDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI  400 (486)
Q Consensus       331 ~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~-~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v  400 (486)
                      +.+        ..|.+||  +++.   ......+...+.. +.| ++ ++++++.++.+++| +.+++... +..+...+
T Consensus       233 ~~~~~~~~~~~~~l~~~d--~~~~---~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v  304 (347)
T 2gop_A          233 GKPEKKYMSEHNKLYIYD--GKEV---MGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWI  304 (347)
T ss_dssp             ECCSSSCCCSSCEEEEEC--SSCE---EESSTTCCSEEEEEEEETTE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEE
T ss_pred             EccccCCccccceEEEEC--CCce---EeccccCCcccCCccEEcCc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeE
Confidence            643        3688888  4332   2333445566665 667 55 88888999999999 87666543 44457778


Q ss_pred             EEEEeCCCEEEEEeCCCcE-EEEECCCCeeeEEecCccc
Q psy9182         401 ACLQYRDRLVVSGSSDNTI-RLWDIECGACLRVLEGHEE  438 (486)
Q Consensus       401 ~~~~~~~~~l~~~~~dg~v-~iwd~~~~~~~~~~~~h~~  438 (486)
                      .++.+++.++++++.++.. .+|.+. ++ ...+..|..
T Consensus       305 ~~~~~s~~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~  341 (347)
T 2gop_A          305 MGFDVDEIVVYLKETATRLRELFTWD-GE-EKQLTDYND  341 (347)
T ss_dssp             EEEEESSSEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred             EeeeeeCcEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence            8888866667777777765 777776 54 445665554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.35  E-value=8.2e-11  Score=111.26  Aligned_cols=225  Identities=13%  Similarity=0.082  Sum_probs=144.8

Q ss_pred             EEEeCCCEEEEEec-CC--eEEEEECCCceeeEEEcCCcccEE--EEEecCCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         239 CLQYDDHKIVSGLR-DN--TIKVWDRVSLQCIKVLTGHTGSVL--CLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       239 ~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +++|||++|+.++. +|  .|.+||+.+++......++...+.  .++.|++.|+.++.++.|++||+.+++.......+
T Consensus        42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~  121 (388)
T 3pe7_A           42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP  121 (388)
T ss_dssp             CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred             cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech
Confidence            57899999998887 66  488999999988877776665543  44558999999999999999999999877666655


Q ss_pred             CccEEEEEE--cCC--eEEEE----------------------eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--
Q psy9182         314 CEAVLHLRF--SNG--MMVTC----------------------SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--  365 (486)
Q Consensus       314 ~~~i~~~~~--~~~--~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--  365 (486)
                      ...+....+  +++  .++..                      ..+..|.+||+.+++....    ..+...+..+.|  
T Consensus       122 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l----~~~~~~~~~~~~sp  197 (388)
T 3pe7_A          122 AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI----LQENQWLGHPIYRP  197 (388)
T ss_dssp             TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE----EEESSCEEEEEEET
T ss_pred             hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe----ecCCccccccEECC
Confidence            554543333  433  44321                      2346899999988764322    223344554444  


Q ss_pred             -CCCEEEEEeCC------CcEEEEECCCceEEEEEcCCc--ccEEEEEe--CCCEEEEEeC-CC----cEEEEECCCCee
Q psy9182         366 -DEKYIVSASGD------RTIKVWNTSSCEFVRTLNGHK--RGIACLQY--RDRLVVSGSS-DN----TIRLWDIECGAC  429 (486)
Q Consensus       366 -~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~--~~v~~~~~--~~~~l~~~~~-dg----~v~iwd~~~~~~  429 (486)
                       +++.|+....+      ..|.++|...++. ..+..+.  ..+....|  +|+.|+..+. ++    .|++||+.+++.
T Consensus       198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~  276 (388)
T 3pe7_A          198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN  276 (388)
T ss_dssp             TEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred             CCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence             67778777653      3788888876543 4444443  24555566  5776655443 22    399999998874


Q ss_pred             e--EEecCcccC---e--EEEEecCCEEEEE---------eCCCcEEEEeCCCCC
Q psy9182         430 L--RVLEGHEEL---V--RCIRFDAKRIVSG---------AYDGKIKVWNLVAAL  468 (486)
Q Consensus       430 ~--~~~~~h~~~---v--~~~~~~~~~l~s~---------~~dg~v~iwdl~~~~  468 (486)
                      .  ..+.++...   .  ..+..||+.|+..         ..+..|++||+.++.
T Consensus       277 ~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (388)
T 3pe7_A          277 RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT  331 (388)
T ss_dssp             EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred             EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence            3  333331111   0  1234488877753         456789999998753

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.34  E-value=6.8e-10  Score=112.24  Aligned_cols=225  Identities=13%  Similarity=0.083  Sum_probs=152.3

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCC-c----ccEE-EEEecCCEEEEEeC------CCcEEEEECCCCcEEEEe
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH-T----GSVL-CLQYDERVIISGSS------DSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~----~~v~-~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~  310 (486)
                      ++..+++++.|+.|..+|..+|+.+..+..+ .    ..+. .....+..+++++.      +|.|+.+|.++|+.+..+
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~  206 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW  206 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence            4567888889999999999999999888754 1    1121 11224556666654      689999999999998877


Q ss_pred             cccCcc--------------------------------EEEEEEc--CCeEEEEeCCC-------------------cEE
Q psy9182         311 IHHCEA--------------------------------VLHLRFS--NGMMVTCSKDR-------------------SIA  337 (486)
Q Consensus       311 ~~~~~~--------------------------------i~~~~~~--~~~l~~~~~dg-------------------~i~  337 (486)
                      ......                                ...++++  .+.+++++.++                   .|.
T Consensus       207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~  286 (677)
T 1kb0_A          207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV  286 (677)
T ss_dssp             ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence            532111                                0234554  45788777664                   499


Q ss_pred             EEECCCCCceeeEEeeecC--------c-ccEEEEEeCC---CEEEEEeCCCcEEEEECCCceEEEEEcCCccc------
Q psy9182         338 VWDMVSPNEITLRRVLVGH--------R-AAVNVVDFDE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG------  399 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~--------~-~~v~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------  399 (486)
                      .+|..+++..-..+. ..|        . ..+.....+|   ..++.++.+|.++++|..+|+.+..+......      
T Consensus       287 AlD~~TG~~~W~~~~-~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d  365 (677)
T 1kb0_A          287 ALDPDTGKYKWHYQE-TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD  365 (677)
T ss_dssp             EECTTTCCEEEEEES-STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred             EEECCCCCEEEEEec-CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence            999999886543332 112        1 1222233367   68899999999999999999998776522100      


Q ss_pred             -------------------------------EEEEEeCCCEEEEEeC---------------------------------
Q psy9182         400 -------------------------------IACLQYRDRLVVSGSS---------------------------------  415 (486)
Q Consensus       400 -------------------------------v~~~~~~~~~l~~~~~---------------------------------  415 (486)
                                                     -.++..+..++++...                                 
T Consensus       366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~  445 (677)
T 1kb0_A          366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF  445 (677)
T ss_dssp             TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred             CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence                                           0122334566666533                                 


Q ss_pred             ----------CCcEEEEECCCCeeeEEecCcccCeEE--EEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         416 ----------DNTIRLWDIECGACLRVLEGHEELVRC--IRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       416 ----------dg~v~iwd~~~~~~~~~~~~h~~~v~~--~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                                .|.|..||+.+|+.+..+... .++..  +..++..++.++.||.+++||+.++..
T Consensus       446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~  510 (677)
T 1kb0_A          446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK  510 (677)
T ss_dssp             ECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence                      278999999999999887633 33332  344888999999999999999998753

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.34  E-value=8.2e-10  Score=113.63  Aligned_cols=227  Identities=13%  Similarity=0.072  Sum_probs=144.2

Q ss_pred             EEEEeCCCEEEEEecC-----CeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCc--------------E
Q psy9182         238 YCLQYDDHKIVSGLRD-----NTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDST--------------V  296 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~--------------i  296 (486)
                      .+++|||++|+.+..+     ..|++||+.+++.+.... +...+..++|  | +.|+.+..++.              |
T Consensus       168 ~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v  245 (741)
T 1yr2_A          168 WAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTV  245 (741)
T ss_dssp             EEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------CCCCCEE
T ss_pred             EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEE
Confidence            4567888888876654     369999999988765321 1111234566  7 88888776654              8


Q ss_pred             EEEECCCCcE--EEEe--cccCccEEEEEEcCC--eEEEEeCC-----CcEEEEECCCC--CceeeEEeeecCcccEEEE
Q psy9182         297 RVWDVNTGEM--VNTL--IHHCEAVLHLRFSNG--MMVTCSKD-----RSIAVWDMVSP--NEITLRRVLVGHRAAVNVV  363 (486)
Q Consensus       297 ~vwd~~~~~~--~~~~--~~~~~~i~~~~~~~~--~l~~~~~d-----g~i~i~d~~~~--~~~~~~~~~~~~~~~v~~~  363 (486)
                      ++|++.++..  ...+  ..+...+..+.++++  .++..+.+     ..|++||+.++  +...  ............+
T Consensus       246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~--~l~~~~~~~~~~~  323 (741)
T 1yr2_A          246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT--ALIPDLKAQWDFV  323 (741)
T ss_dssp             EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE--EEECSSSSCEEEE
T ss_pred             EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE--EecCCCCceEEEE
Confidence            9999987752  2222  223335788888865  56655543     48999999876  3011  1222222233334


Q ss_pred             EeCCCEEEEEeCC----CcEEEEECCCc--eEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECC-CCeeeEEecC
Q psy9182         364 DFDEKYIVSASGD----RTIKVWNTSSC--EFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE-CGACLRVLEG  435 (486)
Q Consensus       364 ~~~~~~l~~~~~d----~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~  435 (486)
                      ..+++.|+..+.+    +.|.+||+.++  +....+..+...+..+.+. +.++++...|+..+||.+. +++....+..
T Consensus       324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~  403 (741)
T 1yr2_A          324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL  403 (741)
T ss_dssp             EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC
T ss_pred             eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC
Confidence            4588888877753    45999999874  3444445555556666665 5667788889887777554 4666666664


Q ss_pred             -cccCeEEEEe--cCCEEE-EEe---CCCcEEEEeCCCCC
Q psy9182         436 -HEELVRCIRF--DAKRIV-SGA---YDGKIKVWNLVAAL  468 (486)
Q Consensus       436 -h~~~v~~~~~--~~~~l~-s~~---~dg~v~iwdl~~~~  468 (486)
                       +...+..+.+  +++.|+ +.+   ..++|++||+.++.
T Consensus       404 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          404 PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence             3566788887  566554 322   35789999997653

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.34  E-value=6.9e-09  Score=97.00  Aligned_cols=230  Identities=10%  Similarity=-0.043  Sum_probs=148.1

Q ss_pred             eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC-------cccE--EEEEecCCEEEEEeC--CCc
Q psy9182         237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH-------TGSV--LCLQYDERVIISGSS--DST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~-------~~~v--~~~~~~~~~l~~~~~--dg~  295 (486)
                      -+.+++|++.++++.          .++.|.+||..+++.+..+...       ....  ..++.|+++|+++..  ++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            677899999998886          3678999999998888776432       0112  334458999998874  478


Q ss_pred             EEEEECCCCcEEEE-ecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEe--eecCcccE-EEE--EeCCCE
Q psy9182         296 VRVWDVNTGEMVNT-LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV--LVGHRAAV-NVV--DFDEKY  369 (486)
Q Consensus       296 i~vwd~~~~~~~~~-~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~~~v-~~~--~~~~~~  369 (486)
                      |.++| .+++.+.. +... ..+......+..+++.+.||.+.++|. +++.......  .......+ ...  ..++..
T Consensus       150 v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  226 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR  226 (373)
T ss_pred             EEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE
Confidence            99999 99998877 6442 222222223446677788999999999 7664422110  00111111 111  223444


Q ss_pred             EEEEeCCCcEEEEECCCce--EEEEEcCC----------cccE--EEEEeCCCEEEEEeC----------CCcEEEEECC
Q psy9182         370 IVSASGDRTIKVWNTSSCE--FVRTLNGH----------KRGI--ACLQYRDRLVVSGSS----------DNTIRLWDIE  425 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~--~~~~~~~~----------~~~v--~~~~~~~~~l~~~~~----------dg~v~iwd~~  425 (486)
                      ++..+..+.+.+.|+.+..  .+..+...          ....  ..+..+++.+.++..          ++.|.++|+.
T Consensus       227 ~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~  306 (373)
T 2mad_H          227 IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL  306 (373)
T ss_pred             EEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence            3333467899999987542  22333211          1111  234445676666543          3579999999


Q ss_pred             CCeeeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCCCC
Q psy9182         426 CGACLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAALDP  470 (486)
Q Consensus       426 ~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~~~  470 (486)
                      +++.+..+... .....++|  ||+ +++++. .++.|.+||+.+....
T Consensus       307 t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv  354 (373)
T 2mad_H          307 VGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD  354 (373)
T ss_pred             CCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence            99999888543 35778888  888 777777 5899999999876543

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.33  E-value=3.6e-09  Score=107.22  Aligned_cols=304  Identities=9%  Similarity=0.058  Sum_probs=181.8

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      .+..|+.++.++.|..+|..+|+.+..+..+...........     ......+.+ ++..++.++.|+.|..+|..+++
T Consensus        69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~g~v~v~~~dg~l~AlDa~TG~  142 (689)
T 1yiq_A           69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACC-----DAVNRGVAV-WKGKVYVGVLDGRLEAIDAKTGQ  142 (689)
T ss_dssp             ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTT-----CSCCCCCEE-ETTEEEEECTTSEEEEEETTTCC
T ss_pred             ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccc-----cCCCCccEE-ECCEEEEEccCCEEEEEECCCCC
Confidence            456778888899999999999999988765432110000000     000001111 23456666778888888876665


Q ss_pred             ccccCCCC-CCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------cCCeEEEEECCCceee
Q psy9182         195 ETPIQGGG-GGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------RDNTIKVWDRVSLQCI  267 (486)
Q Consensus       195 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~  267 (486)
                      ........ ....         .             .......++    .+..++++.      .+|.|+.||..+|+.+
T Consensus       143 ~~W~~~~~~~~~~---------~-------------~~~~~sP~v----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~  196 (689)
T 1yiq_A          143 RAWSVDTRADHKR---------S-------------YTITGAPRV----VNGKVVIGNGGAEFGVRGYVTAYDAETGKEA  196 (689)
T ss_dssp             EEEEEECCSCTTS---------C-------------CBCCSCCEE----ETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             EeeeecCcCCCCC---------C-------------ccccCCcEE----ECCEEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence            44322111 0000         0             000001111    234455544      3689999999999998


Q ss_pred             EEEcCCc---c---------------------------cE-EEEEe--cCCEEEEEeCCCc-------------------
Q psy9182         268 KVLTGHT---G---------------------------SV-LCLQY--DERVIISGSSDST-------------------  295 (486)
Q Consensus       268 ~~~~~~~---~---------------------------~v-~~~~~--~~~~l~~~~~dg~-------------------  295 (486)
                      ..+....   .                           .+ ..+++  +...++.++.++.                   
T Consensus       197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~  276 (689)
T 1yiq_A          197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS  276 (689)
T ss_dssp             EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred             EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence            8775210   0                           00 12344  5678888887763                   


Q ss_pred             EEEEECCCCcEEEEeccc--C-------ccE--EEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeee-------
Q psy9182         296 VRVWDVNTGEMVNTLIHH--C-------EAV--LHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLV-------  354 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~--~-------~~i--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------  354 (486)
                      |..+|.++|+.+..++..  .       ...  ..+.+.+.   .++.++.+|.++++|..+++.+.......       
T Consensus       277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~  356 (689)
T 1yiq_A          277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM  356 (689)
T ss_dssp             EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence            999999999999887542  1       111  22333332   68889999999999999988653211100       


Q ss_pred             ------------------cCc-------------ccEEEEEeCCCEEEEEeC----------------------------
Q psy9182         355 ------------------GHR-------------AAVNVVDFDEKYIVSASG----------------------------  375 (486)
Q Consensus       355 ------------------~~~-------------~~v~~~~~~~~~l~~~~~----------------------------  375 (486)
                                        ...             -.-.+++.+..++++...                            
T Consensus       357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  436 (689)
T 1yiq_A          357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT  436 (689)
T ss_dssp             ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred             CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence                              000             000123334455555421                            


Q ss_pred             -----------------CCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182         376 -----------------DRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE  437 (486)
Q Consensus       376 -----------------d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~  437 (486)
                                       +|.|..||+.+++.+.+++.+.... ..+...+.+++.|+.||.|+.||.++|+.+..++...
T Consensus       437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~  516 (689)
T 1yiq_A          437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS  516 (689)
T ss_dssp             CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence                             3779999999999988887554322 2455578899999999999999999999999887543


Q ss_pred             cCe-EEEEe--cCCEE
Q psy9182         438 ELV-RCIRF--DAKRI  450 (486)
Q Consensus       438 ~~v-~~~~~--~~~~l  450 (486)
                      ..+ .-+.|  +|+..
T Consensus       517 ~~~~~p~ty~~~G~qy  532 (689)
T 1yiq_A          517 GVMAAPVTYSVDGEQY  532 (689)
T ss_dssp             CCCSCCEEEEETTEEE
T ss_pred             CcccCceEEEECCEEE
Confidence            321 23444  77653

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.33  E-value=4.2e-10  Score=102.12  Aligned_cols=232  Identities=11%  Similarity=0.038  Sum_probs=149.2

Q ss_pred             ccccCCccCcc-eEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         107 FISLLPNFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       107 ~~~~~~s~~~~-~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .-+++++|+++ +++++..++.|..||..++  ...+..+...+.+++++               +++..+++...++.|
T Consensus        30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~---------------~dg~l~v~~~~~~~i   92 (296)
T 3e5z_A           30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLN---------------KQGHLIACSHGLRRL   92 (296)
T ss_dssp             EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEEC---------------TTCCEEEEETTTTEE
T ss_pred             ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeEC---------------CCCcEEEEecCCCeE
Confidence            34678889998 7888888999999999877  66777777778888886               456666666667889


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEE----Ee----------
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS----GL----------  251 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~----~~----------  251 (486)
                      .+||..++.......                         ...........-+++.++|+++++    |+          
T Consensus        93 ~~~d~~~g~~~~~~~-------------------------~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~  147 (296)
T 3e5z_A           93 ERQREPGGEWESIAD-------------------------SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE  147 (296)
T ss_dssp             EEECSTTCCEEEEEC-------------------------EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred             EEEcCCCCcEEEEee-------------------------ccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence            999874433211100                         000000112234567788888776    33          


Q ss_pred             ---cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECC-CCcE---EEEecccCccEEEEEE
Q psy9182         252 ---RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVN-TGEM---VNTLIHHCEAVLHLRF  322 (486)
Q Consensus       252 ---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~---~~~~~~~~~~i~~~~~  322 (486)
                         ..+.|..++.. ++. ..+..+......+++  +++.+++.+.++.|.+||+. +++.   ...+..+...+..+++
T Consensus       148 ~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~  225 (296)
T 3e5z_A          148 MELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV  225 (296)
T ss_dssp             CCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE
T ss_pred             ccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE
Confidence               13467777655 443 334445556677777  68888777778999999987 5554   2333233444567788


Q ss_pred             cC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceE
Q psy9182         323 SN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       323 ~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      ++ +.++++. ++.|.+||.. ++..   ..+..+.. +.++.|   +++.|++++.+ .+.-++..+.+.
T Consensus       226 d~~G~l~v~~-~~~v~~~~~~-g~~~---~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~  289 (296)
T 3e5z_A          226 DAGGLIWASA-GDGVHVLTPD-GDEL---GRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL  289 (296)
T ss_dssp             BTTSCEEEEE-TTEEEEECTT-SCEE---EEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred             CCCCCEEEEc-CCeEEEECCC-CCEE---EEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence            64 3566666 8899999986 4433   23333444 667776   56788888775 466667766554

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.32  E-value=1.6e-14  Score=135.54  Aligned_cols=210  Identities=12%  Similarity=0.049  Sum_probs=104.3

Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCccc-E-EEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-V-LCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF  322 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v-~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~  322 (486)
                      .+++++.||.|+.||..+++.+..+..+... + .+... ++..+++++.++.|+.||.++|+.+..+..+.. + ..+.
T Consensus        51 ~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~-~~~p  128 (369)
T 2hz6_A           51 AFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-D-SLSP  128 (369)
T ss_dssp             CEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------
T ss_pred             EEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-c-cccc
Confidence            3444556666666666666655554432111 1 01111 345677777888899999888888777654431 1 1122


Q ss_pred             cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-----CEEEEEeCCCcEEEEECCCceEEEEEcCCc
Q psy9182         323 SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-----KYIVSASGDRTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       323 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  397 (486)
                      .++.+++++.++.|+.||.++++........ .    .....+++     ..+++++.+|.|+.||.++++.+..+....
T Consensus       129 ~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~  203 (369)
T 2hz6_A          129 STSLLYLGRTEYTITMYDTKTRELRWNATYF-D----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS  203 (369)
T ss_dssp             ----EEEEEEEEEEECCCSSSSSCCCEEEEE-E----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred             cCCEEEEEecCCEEEEEECCCCCEEEeEecc-c----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence            4568888888899999999887754322211 1    11112222     567778899999999999999888776433


Q ss_pred             ccEEEEEeC--CCEE----EEEeCCCcEEEEECCCCe----eeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182         398 RGIACLQYR--DRLV----VSGSSDNTIRLWDIECGA----CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       398 ~~v~~~~~~--~~~l----~~~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ..+......  +...    +.+  ++.++.+|..+|+    .+..+... ..+.+....+..|+.++.||.|+.++..
T Consensus       204 pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~~tG~~~~~~~W~~~~~-~~~~sp~~~~g~lyv~~~~G~l~al~~~  278 (369)
T 2hz6_A          204 PVVAFYVWQREGLRKVMHINVA--VETLRYLTFMSGEVGRITKWKYPFP-KETEAKSKLTPTLYVGKYSTSLYASPSM  278 (369)
T ss_dssp             CEEEEEECTTSSCEEECCEEEE--HHHHHHHHHHHHHHHHHHTSCCCCC-CHHHHHHHSEEEECBEECSSCEECCEEE
T ss_pred             ceEEEEEecCCceEeccceeec--ccceeeeehhcCCcccceeeeeccC-ccccccccccceEEEecccCCEEecCcc
Confidence            322323332  2211    111  3445666666665    44333211 1111111245678888889999988876

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.32  E-value=2.1e-10  Score=102.53  Aligned_cols=235  Identities=9%  Similarity=-0.038  Sum_probs=143.8

Q ss_pred             cccccCCccCcceEE-EeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         106 DFISLLPNFDEKYIV-SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~-tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      ....++++++|++++ +...++.|.+||..++........+...+.+++++               +++..+++.. ++.
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~---------------~~g~l~v~~~-~~~   88 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVD---------------GAGTVYVTDF-NNR   88 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEEC---------------TTCCEEEEET-TTE
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEEC---------------CCCCEEEEcC-CCE
Confidence            455677888998777 55778999999987655332222333456667775               3444455544 778


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCc
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~  264 (486)
                      |.+||..........                             ........-+++.+++..+++...++.|.+|+..+.
T Consensus        89 i~~~d~~~~~~~~~~-----------------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~  139 (270)
T 1rwi_B           89 VVTLAAGSNNQTVLP-----------------------------FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK  139 (270)
T ss_dssp             EEEECTTCSCCEECC-----------------------------CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC
T ss_pred             EEEEeCCCceEeeee-----------------------------cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc
Confidence            888886432211100                             000112223455667887777777889999986655


Q ss_pred             eeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEE-eCCCcEEEEE
Q psy9182         265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTC-SKDRSIAVWD  340 (486)
Q Consensus       265 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~-~~dg~i~i~d  340 (486)
                      ............+.++.+  +++++++...++.|.+||................+..++++++ .++++ ..++.|.+||
T Consensus       140 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~  219 (270)
T 1rwi_B          140 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL  219 (270)
T ss_dssp             SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred             eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence            433322222234556666  5776666666789999998876654433333366788898754 55544 4578999999


Q ss_pred             CCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182         341 MVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .......   .....+...+..+.+  +|+++++...++.|++++....+
T Consensus       220 ~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          220 AGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             TTCSCCE---ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred             CCCCcce---eeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence            8664432   111223345677777  67778888889999999987654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.30  E-value=1.1e-10  Score=119.31  Aligned_cols=225  Identities=10%  Similarity=0.019  Sum_probs=144.0

Q ss_pred             eEEEEeCCCEEEE-----EecCCeEEEEECCCceeeEEEcCCcccE--EEEEe--cCCEEEEEeCCCc------------
Q psy9182         237 VYCLQYDDHKIVS-----GLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQY--DERVIISGSSDST------------  295 (486)
Q Consensus       237 v~~~~~~~~~l~~-----~~~dg~i~i~d~~~~~~~~~~~~~~~~v--~~~~~--~~~~l~~~~~dg~------------  295 (486)
                      ...++|||++|+.     |+.+..|++||+.+++.+.  ..+...+  ..++|  |++.|+.++.|..            
T Consensus       125 ~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~  202 (695)
T 2bkl_A          125 TWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT  202 (695)
T ss_dssp             EEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred             EEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence            4567889999884     3445689999999988651  1111122  45556  8899999888776            


Q ss_pred             -EEEEECCCCc----EEEEecccCccEEEEEEcCC--eEEEEeCCC----cEEEEECCCCCceeeEEeeecCcccEEEEE
Q psy9182         296 -VRVWDVNTGE----MVNTLIHHCEAVLHLRFSNG--MMVTCSKDR----SIAVWDMVSPNEITLRRVLVGHRAAVNVVD  364 (486)
Q Consensus       296 -i~vwd~~~~~----~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~  364 (486)
                       |++|++.+++    ++.....+...+..+.++++  .++.++.++    .|.++|..+++...    +..+...+....
T Consensus       203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~----l~~~~~~~~~~~  278 (695)
T 2bkl_A          203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL----LVKGVGAKYEVH  278 (695)
T ss_dssp             EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE----EEECSSCCEEEE
T ss_pred             EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE----eecCCCceEEEE
Confidence             9999998876    33333344567888889865  566665554    67777655443221    222222333333


Q ss_pred             -eCCCEEEEEeC----CCcEEEEECCCceE---EEEEcCC-cccEEEEEeC-CCEEEEEeCCCcEEEEECC-CCeeeEEe
Q psy9182         365 -FDEKYIVSASG----DRTIKVWNTSSCEF---VRTLNGH-KRGIACLQYR-DRLVVSGSSDNTIRLWDIE-CGACLRVL  433 (486)
Q Consensus       365 -~~~~~l~~~~~----d~~i~iwd~~~~~~---~~~~~~~-~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~-~~~~~~~~  433 (486)
                       .++. ++..+.    ++.|.+||+.+++.   ...+..+ ...+..+.+. +.++++...|+..++|.+. +++....+
T Consensus       279 ~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l  357 (695)
T 2bkl_A          279 AWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV  357 (695)
T ss_dssp             EETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred             ecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence             4666 544443    57899999987653   3333333 3456666664 6677888889988888664 46666666


Q ss_pred             cCc-ccCeEEEEe--cCCEEEEE----eCCCcEEEEeCCCCC
Q psy9182         434 EGH-EELVRCIRF--DAKRIVSG----AYDGKIKVWNLVAAL  468 (486)
Q Consensus       434 ~~h-~~~v~~~~~--~~~~l~s~----~~dg~v~iwdl~~~~  468 (486)
                      ..+ ...+..+++  +++.++..    ...++|++||+.++.
T Consensus       358 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          358 QLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK  399 (695)
T ss_dssp             CCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            655 556677777  66666532    235789999998753

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.29  E-value=3.1e-09  Score=99.97  Aligned_cols=275  Identities=16%  Similarity=0.097  Sum_probs=179.5

Q ss_pred             CCccCcceEEEeecC-----ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC-----
Q psy9182         111 LPNFDEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS-----  180 (486)
Q Consensus       111 ~~s~~~~~l~tg~~d-----g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s-----  180 (486)
                      ++.+++++++.....     +.|.+.|..+++.+.++..-..+  .++++               +|++.++.+.     
T Consensus        79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~S---------------pDgk~lyVan~~~~~  141 (426)
T 3c75_H           79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAA---------------EDGSFFAQASTVFER  141 (426)
T ss_dssp             CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEEC---------------TTSSCEEEEEEEEEE
T ss_pred             cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEEC---------------CCCCEEEEEeccccc
Confidence            566788776665542     79999999999999988754444  67776               5666666554     


Q ss_pred             -----CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc------CCCccceEEEEeCCCEEEE
Q psy9182         181 -----HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR------SENSKGVYCLQYDDHKIVS  249 (486)
Q Consensus       181 -----~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~l~~  249 (486)
                           .++.|.++|..+.+...                            .+...      ......-+.+++|++++++
T Consensus       142 ~~~G~~~~~VsviD~~t~~vv~----------------------------~I~v~g~~r~~~g~~P~~~~~spDGk~lyV  193 (426)
T 3c75_H          142 IARGKRTDYVEVFDPVTFLPIA----------------------------DIELPDAPRFLVGTYQWMNALTPDNKNLLF  193 (426)
T ss_dssp             TTEEEEEEEEEEECTTTCCEEE----------------------------EEEETTCCCCCBSCCGGGSEECTTSSEEEE
T ss_pred             cccCCCCCEEEEEECCCCcEEE----------------------------EEECCCccccccCCCcceEEEcCCCCEEEE
Confidence                 46789999986644322                            11110      0122344678899999998


Q ss_pred             Eec--CCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe----cccCccE-EEEE
Q psy9182         250 GLR--DNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL----IHHCEAV-LHLR  321 (486)
Q Consensus       250 ~~~--dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~----~~~~~~i-~~~~  321 (486)
                      +..  ++.|.+.|+.+++.+..+.....  ..+.. ....+++.+.||.+.+.+..+++.....    .....++ ..+.
T Consensus       194 ~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~  271 (426)
T 3c75_H          194 YQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPA  271 (426)
T ss_dssp             EECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCE
T ss_pred             EecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEee
Confidence            874  57899999999999988874322  22333 3467777888999999998666655321    1111111 1223


Q ss_pred             Ec--CCeEEEEeCCCcEEEEECCCCCceeeE--Eee---------ecCcccEEEEEeCCCEEEEEeC----------CCc
Q psy9182         322 FS--NGMMVTCSKDRSIAVWDMVSPNEITLR--RVL---------VGHRAAVNVVDFDEKYIVSASG----------DRT  378 (486)
Q Consensus       322 ~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~---------~~~~~~v~~~~~~~~~l~~~~~----------d~~  378 (486)
                      +.  ++.++.....+.|.+.|+.........  ...         .........+..+++.+++...          ++.
T Consensus       272 ~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~  351 (426)
T 3c75_H          272 FSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF  351 (426)
T ss_dssp             ECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE
T ss_pred             ecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE
Confidence            33  346666677889999998654321110  000         0111112356667777766642          357


Q ss_pred             EEEEECCCceEEEEEcCCcccEEEEE--eCCC-EEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182         379 IKVWNTSSCEFVRTLNGHKRGIACLQ--YRDR-LVVSGS-SDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~  433 (486)
                      |.+.|..+.+.+.++.... ....+.  .+++ ++++.. .++.|.++|+.+++.+..+
T Consensus       352 VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          352 VVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             EEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            9999999999999887433 233444  4677 888887 5999999999999999887

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.27  E-value=5.8e-10  Score=114.78  Aligned_cols=179  Identities=18%  Similarity=0.094  Sum_probs=108.1

Q ss_pred             CeEEEEECCCcee--eEEEc--CCcccEEEEEe--cCCEEEEEeCCC-----cEEEEECCCC--cEEEEecccCccEE-E
Q psy9182         254 NTIKVWDRVSLQC--IKVLT--GHTGSVLCLQY--DERVIISGSSDS-----TVRVWDVNTG--EMVNTLIHHCEAVL-H  319 (486)
Q Consensus       254 g~i~i~d~~~~~~--~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg-----~i~vwd~~~~--~~~~~~~~~~~~i~-~  319 (486)
                      ..|++|++.++..  ...+.  .+...+..+.+  ||++|+..+.++     .|++||+.++  +....+..+..... .
T Consensus       243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~  322 (741)
T 1yr2_A          243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF  322 (741)
T ss_dssp             CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred             CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence            4577788766542  22232  23334666666  888888777544     8999999877  41344444333333 3


Q ss_pred             EEEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECC-CceEEEEE
Q psy9182         320 LRFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS-SCEFVRTL  393 (486)
Q Consensus       320 ~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~-~~~~~~~~  393 (486)
                      +...++.++..+.    ++.|.+||+.++. .........+...+..+.+ ++.++++...|+..++|... +++....+
T Consensus       323 ~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l  401 (741)
T 1yr2_A          323 VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAV  401 (741)
T ss_dssp             EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred             EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence            3334567777665    3459999988753 1122333444555666777 55677778888887776544 45666666


Q ss_pred             cCC-cccEEEEEeC--CCEEE-EEe---CCCcEEEEECCCCeeeEEec
Q psy9182         394 NGH-KRGIACLQYR--DRLVV-SGS---SDNTIRLWDIECGACLRVLE  434 (486)
Q Consensus       394 ~~~-~~~v~~~~~~--~~~l~-~~~---~dg~v~iwd~~~~~~~~~~~  434 (486)
                      ..+ ...+..+.++  ++.++ +.+   ..++|++||+.+++ ...++
T Consensus       402 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l~  448 (741)
T 1yr2_A          402 SLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPWE  448 (741)
T ss_dssp             BCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEECS
T ss_pred             cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEEe
Confidence            643 5567777763  54444 333   34789999999887 33443

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.27  E-value=5.9e-09  Score=96.26  Aligned_cols=227  Identities=13%  Similarity=0.062  Sum_probs=150.3

Q ss_pred             EEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC---------cccEEEEEecCCEEEEEeC--CCcE
Q psy9182         238 YCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH---------TGSVLCLQYDERVIISGSS--DSTV  296 (486)
Q Consensus       238 ~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~l~~~~~--dg~i  296 (486)
                      +.+++++++++++.          .++.|.+||..+++.+..+...         ...-..++.||++++++..  ++.|
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V  162 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV  162 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence            78999999887775          3678999999999998877522         1122455669999888864  6899


Q ss_pred             EEEECCCCcEEEEecccCccEEEEEE-cCCeEEEEeCCCcEEEEECCC-CCceeeEE-eeecCcccEE-EEEe---CCCE
Q psy9182         297 RVWDVNTGEMVNTLIHHCEAVLHLRF-SNGMMVTCSKDRSIAVWDMVS-PNEITLRR-VLVGHRAAVN-VVDF---DEKY  369 (486)
Q Consensus       297 ~vwd~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~-~~~~~~~~v~-~~~~---~~~~  369 (486)
                      .++|+.+++.+.++....  ...+.. ....+++.+.||.+.+.++.. ++...... .+......+. ...|   +|++
T Consensus       163 sVID~~t~~vv~tI~v~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~  240 (386)
T 3sjl_D          163 GVVDLEGKAFKRMLDVPD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL  240 (386)
T ss_dssp             EEEETTTTEEEEEEECCS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred             EEEECCCCcEEEEEECCC--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcE
Confidence            999999999998885432  112222 245777888999999999976 44321110 1111111121 1233   5555


Q ss_pred             EEEEeCCCcEEEEECCCce--EEEEEc------------CCcccEEEEEeCCCEEEEEeC----------CCcEEEEECC
Q psy9182         370 IVSASGDRTIKVWNTSSCE--FVRTLN------------GHKRGIACLQYRDRLVVSGSS----------DNTIRLWDIE  425 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~--~~~~~~------------~~~~~v~~~~~~~~~l~~~~~----------dg~v~iwd~~  425 (486)
                      ++ .+.+|.|++.|..+..  ....+.            ........+..+++.++....          .+.|.+.|++
T Consensus       241 ~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~  319 (386)
T 3sjl_D          241 VW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK  319 (386)
T ss_dssp             EE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred             EE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECC
Confidence            44 5568999999997653  333332            111223445556676666542          2579999999


Q ss_pred             CCeeeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCC
Q psy9182         426 CGACLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAAL  468 (486)
Q Consensus       426 ~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~  468 (486)
                      +++.+..+..- ..+.+|++  |++ +|+++. .++.|.++|..+..
T Consensus       320 t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k  365 (386)
T 3sjl_D          320 TGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE  365 (386)
T ss_dssp             TCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred             CCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence            99999888643 35778888  775 666654 58999999998765

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.26  E-value=5.1e-10  Score=103.80  Aligned_cols=168  Identities=10%  Similarity=0.078  Sum_probs=130.1

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCce-----------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ-----------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~  302 (486)
                      ....+++++...++++|+.++ +.+|++...+           ...... +.. |+.++|+++.|+++ .++.|++||+.
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~  114 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCFHGDQVLVS-TRNALYSLDLE  114 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence            456788889999999999885 6669865433           112232 556 99999999999998 88999999998


Q ss_pred             CCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEE
Q psy9182         303 TGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW  382 (486)
Q Consensus       303 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iw  382 (486)
                      +.........+...+.++.+.+..+++++.||.|.+||+.++....       +...|.+++|..+-++.|..||++++|
T Consensus       115 sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG~~vg~~dg~i~~~  187 (388)
T 1xip_A          115 ELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQLAVLLKDRSFQSF  187 (388)
T ss_dssp             STTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred             hhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCceEEEEcCCcEEEE
Confidence            8776666666777788888877679999999999999998776431       346899999965558899999999999


Q ss_pred             ECCCceE--EEEE------c---CCcccEEEEEeC--CCEEEE
Q psy9182         383 NTSSCEF--VRTL------N---GHKRGIACLQYR--DRLVVS  412 (486)
Q Consensus       383 d~~~~~~--~~~~------~---~~~~~v~~~~~~--~~~l~~  412 (486)
                      +...++.  ..++      .   +|...|.++.|.  +.++++
T Consensus       188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            9888775  5566      2   367889999995  445554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.25  E-value=6.3e-10  Score=103.17  Aligned_cols=164  Identities=8%  Similarity=0.069  Sum_probs=121.8

Q ss_pred             EEEEecCCEEEEEeCCCcEEEEECCCCc-----------EEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc
Q psy9182         278 LCLQYDERVIISGSSDSTVRVWDVNTGE-----------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE  346 (486)
Q Consensus       278 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~-----------~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  346 (486)
                      .+++....++++|+.++ +.+|++...+           ..... .... |..++|+++.|+++ .++.|++||+.+...
T Consensus        43 Lais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~  118 (388)
T 1xip_A           43 LDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCFHGDQVLVS-TRNALYSLDLEELSE  118 (388)
T ss_dssp             EEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEEETTEEEEE-ESSEEEEEESSSTTC
T ss_pred             EEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEECCCEEEEE-cCCcEEEEEchhhhc
Confidence            34444778899999885 6679865332           11222 2344 99999965688887 889999999988764


Q ss_pred             eeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         347 ITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       347 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~  426 (486)
                      ..   ....+...+..+.+....+++++.||.|.+||+.++....    +...|+|++|+.+-++.|..||.+++|+...
T Consensus       119 ~~---~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~  191 (388)
T 1xip_A          119 FR---TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN  191 (388)
T ss_dssp             EE---EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred             cC---ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCC
Confidence            32   2334566677877754458889999999999999877643    4568999999866689999999999999987


Q ss_pred             Cee--eEEe------c---CcccCeEEEEe--cCCEEEE
Q psy9182         427 GAC--LRVL------E---GHEELVRCIRF--DAKRIVS  452 (486)
Q Consensus       427 ~~~--~~~~------~---~h~~~v~~~~~--~~~~l~s  452 (486)
                      ++.  ...+      .   +|...|.+|.|  ++.++++
T Consensus       192 ~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          192 GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            775  5566      3   47788999999  5566665

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.23  E-value=1.4e-09  Score=110.24  Aligned_cols=227  Identities=11%  Similarity=0.068  Sum_probs=150.4

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCC--c---ccEE-EEEecCCEEEEEe------CCCcEEEEECCCCcEEEE
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH--T---GSVL-CLQYDERVIISGS------SDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~-~~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~~  309 (486)
                      ..+..+++++.|+.|..+|..+|+.+..+...  .   ..+. +-...+..+++++      .+|.|+.||.++|+.+..
T Consensus       119 ~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~  198 (689)
T 1yiq_A          119 VWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR  198 (689)
T ss_dssp             EETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred             EECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence            35678889999999999999999998877642  1   1111 1112344555554      368999999999999887


Q ss_pred             ecccC-------------------------------ccEEEEEEc--CCeEEEEeCCCc-------------------EE
Q psy9182         310 LIHHC-------------------------------EAVLHLRFS--NGMMVTCSKDRS-------------------IA  337 (486)
Q Consensus       310 ~~~~~-------------------------------~~i~~~~~~--~~~l~~~~~dg~-------------------i~  337 (486)
                      +....                               .....++++  .+.+++++.++.                   |.
T Consensus       199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~  278 (689)
T 1yiq_A          199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV  278 (689)
T ss_dssp             EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred             ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence            74210                               000135555  368888887763                   99


Q ss_pred             EEECCCCCceeeEEeeecCc-------cc--EEEEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCcc-c-----
Q psy9182         338 VWDMVSPNEITLRRVLVGHR-------AA--VNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-G-----  399 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~-------~~--v~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~-----  399 (486)
                      .+|..+++..-..+. ..|.       ..  ...+.++|+   .++.++.+|.++++|.++|+++...+.... .     
T Consensus       279 AlD~~TG~~~W~~~~-~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~  357 (689)
T 1yiq_A          279 AVNADTGEYVWHYQT-TPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMD  357 (689)
T ss_dssp             EEETTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEE
T ss_pred             EEEccCCceeEeeec-CCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccC
Confidence            999999986543322 1121       11  123334665   788999999999999999998754331110 0     


Q ss_pred             -----------------------------------EEEEEeCCCEEEEEeC-----------------------------
Q psy9182         400 -----------------------------------IACLQYRDRLVVSGSS-----------------------------  415 (486)
Q Consensus       400 -----------------------------------v~~~~~~~~~l~~~~~-----------------------------  415 (486)
                                                         -.++..+..++++...                             
T Consensus       358 ~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  437 (689)
T 1yiq_A          358 MKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTG  437 (689)
T ss_dssp             TTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEEC
T ss_pred             ccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcccc
Confidence                                               0122223455555421                             


Q ss_pred             ----------------CCcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         416 ----------------DNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       416 ----------------dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                                      +|.|..||+.+|+.+..+..+..... .+.-.+..++.++.||.|+.||.+++..
T Consensus       438 ~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~  508 (689)
T 1yiq_A          438 MMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK  508 (689)
T ss_dssp             CCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCcc
Confidence                            37899999999999988875543222 3444888999999999999999998764

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.23  E-value=1.2e-08  Score=93.23  Aligned_cols=225  Identities=11%  Similarity=0.086  Sum_probs=143.5

Q ss_pred             eEEEEeCCCEEEE-------EecCCeEEEEECCCceeeEEEc----CCcccEEEEEecC--CEEEEEeCCCcEEEEECCC
Q psy9182         237 VYCLQYDDHKIVS-------GLRDNTIKVWDRVSLQCIKVLT----GHTGSVLCLQYDE--RVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       237 v~~~~~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~--~~l~~~~~dg~i~vwd~~~  303 (486)
                      -.++.+++..+++       +..++.|.+||..+++......    ++...+.++.++.  ..++.++..+.|.+||.. 
T Consensus        22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-  100 (314)
T 1pjx_A           22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-  100 (314)
T ss_dssp             EEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-
T ss_pred             CceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-
Confidence            3445567777777       5778999999988877643322    2445678888832  355555555579999998 


Q ss_pred             CcEEEE-ecc----cCccEEEEEEcCC-eEEEEeC-C---------------CcEEEEECCCCCceeeEEeeecCcccEE
Q psy9182         304 GEMVNT-LIH----HCEAVLHLRFSNG-MMVTCSK-D---------------RSIAVWDMVSPNEITLRRVLVGHRAAVN  361 (486)
Q Consensus       304 ~~~~~~-~~~----~~~~i~~~~~~~~-~l~~~~~-d---------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~  361 (486)
                      ++.... ...    ....+.+++++++ .+++++. +               +.|..||.. ++.....    .+.....
T Consensus       101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~----~~~~~~~  175 (314)
T 1pjx_A          101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD----TAFQFPN  175 (314)
T ss_dssp             SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE----EEESSEE
T ss_pred             CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec----cCCCCcc
Confidence            765433 221    1234678888753 4444443 3               467777765 3322111    1112223


Q ss_pred             EE--E----eCCCEEEEE-eCCCcEEEEECC-Cce-----EEEEEcCCc-ccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         362 VV--D----FDEKYIVSA-SGDRTIKVWNTS-SCE-----FVRTLNGHK-RGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       362 ~~--~----~~~~~l~~~-~~d~~i~iwd~~-~~~-----~~~~~~~~~-~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      .+  .    .+++.++.+ ..++.|.+||.. +++     ....+..+. .....+.++  |+++++...++.|.+||.+
T Consensus       176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~  255 (314)
T 1pjx_A          176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD  255 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence            33  3    345555555 467899999976 443     223333443 456667764  7777777788999999998


Q ss_pred             CCeeeEEecCcccCeEEEEe--cCCEEE-EEeCCCcEEEEeCCCC
Q psy9182         426 CGACLRVLEGHEELVRCIRF--DAKRIV-SGAYDGKIKVWNLVAA  467 (486)
Q Consensus       426 ~~~~~~~~~~h~~~v~~~~~--~~~~l~-s~~~dg~v~iwdl~~~  467 (486)
                      +++.+..+..+...+.++++  +++.|+ +...++.|..|++...
T Consensus       256 ~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            88877777777778999999  777555 4455688999998754

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.21  E-value=1.2e-07  Score=85.74  Aligned_cols=213  Identities=11%  Similarity=0.012  Sum_probs=127.9

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeE-EEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEE-ecccCccEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIK-VLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNT-LIHHCEAVL  318 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~i~  318 (486)
                      ++..+++...++.|..||.. ++... ........+.++.+  ++++.++...++.|..+|.. ++.... +......+.
T Consensus        72 ~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~  149 (300)
T 2qc5_A           72 LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPA  149 (300)
T ss_dssp             TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred             CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCce
Confidence            44444444445677777766 44322 12223355677777  46666666667889999987 655432 233345678


Q ss_pred             EEEEcC-CeEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE-E
Q psy9182         319 HLRFSN-GMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT-L  393 (486)
Q Consensus       319 ~~~~~~-~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~-~  393 (486)
                      .+.+.+ +.++++. .++.|..||. +++...  .........+..+.+  ++++.++....+.|.+||. +++.... +
T Consensus       150 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~  225 (300)
T 2qc5_A          150 FITLGSDNALWFTENQNNSIGRITN-TGKLEE--YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI  225 (300)
T ss_dssp             EEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred             eEEECCCCCEEEEecCCCeEEEECC-CCcEEE--eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC
Confidence            888864 3444444 4788999998 444321  122233445677777  5666666656678999998 4544332 3


Q ss_pred             cCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         394 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       394 ~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      ..+...+.++.++  +++.++...++.|..||.. ++.... +......+.++++  +|+..+ ++.. .|..+|.
T Consensus       226 ~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~-~i~~~~p  298 (300)
T 2qc5_A          226 PTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWF-ALKC-KIGKLNL  298 (300)
T ss_dssp             SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEE-ECSS-EEEEEEE
T ss_pred             CCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEE-EccC-ceEEeCC
Confidence            3345567778775  6666655567899999984 543322 3334456788888  455444 4444 6666664

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.19  E-value=6e-12  Score=117.95  Aligned_cols=190  Identities=14%  Similarity=0.112  Sum_probs=116.1

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE--ecCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc-E-E
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA-V-L  318 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-i-~  318 (486)
                      ++..+++++.||.|+.||..+|+.+..+..  +.+.+..  .++..+++++.||.|+.||.++|+.+..+..+... + .
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            678899999999999999999999988876  3443322  25667777789999999999999877666433111 1 0


Q ss_pred             EEEE-cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc
Q psy9182         319 HLRF-SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       319 ~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  397 (486)
                      ...+ .++.+++++.++.|+.||..+++......   .+. . .....++..+++++.|+.|+.||.++++.+..+..+.
T Consensus        86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~---~~~-~-~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~  160 (369)
T 2hz6_A           86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLS---SAF-A-DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD  160 (369)
T ss_dssp             CSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred             CceEecCCEEEEEeCCCEEEEEECCCCcEEEEec---CCC-c-ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence            1111 35678888899999999999887653222   111 1 1223377888999999999999999998776654321


Q ss_pred             ccEEEEEeCC-----CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEE
Q psy9182         398 RGIACLQYRD-----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC  442 (486)
Q Consensus       398 ~~v~~~~~~~-----~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  442 (486)
                        .....+++     ..+++++.||.|+.||.++|+.+..... ..++..
T Consensus       161 --~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~  207 (369)
T 2hz6_A          161 --YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVA  207 (369)
T ss_dssp             --ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEE
T ss_pred             --ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEE
Confidence              11122222     5677889999999999999999888764 344443

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.19  E-value=2.8e-08  Score=100.44  Aligned_cols=184  Identities=10%  Similarity=0.138  Sum_probs=117.1

Q ss_pred             cCCEEEEEeCCC-------------------cEEEEECCCCcEEEEecccC----------ccE-EEEEEcC---CeEEE
Q psy9182         283 DERVIISGSSDS-------------------TVRVWDVNTGEMVNTLIHHC----------EAV-LHLRFSN---GMMVT  329 (486)
Q Consensus       283 ~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~~----------~~i-~~~~~~~---~~l~~  329 (486)
                      ++..++.+..++                   .|..+|.++|+.+..++...          .++ ......+   +.++.
T Consensus       253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~  332 (677)
T 1kb0_A          253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH  332 (677)
T ss_dssp             TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred             CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence            567777776553                   48889999998887765321          111 2222233   46888


Q ss_pred             EeCCCcEEEEECCCCCceeeEEeee--------cCccc--------------------------EEEEEeCCCEEEEEeC
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVLV--------GHRAA--------------------------VNVVDFDEKYIVSASG  375 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~~--------~~~~~--------------------------v~~~~~~~~~l~~~~~  375 (486)
                      ++.+|.++++|..+++.+.......        .....                          -.+++.+..++++...
T Consensus       333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~  412 (677)
T 1kb0_A          333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ  412 (677)
T ss_dssp             CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred             ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence            8889999999998887653322110        00000                          1133335566666432


Q ss_pred             -------------------------------------------CCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEE
Q psy9182         376 -------------------------------------------DRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVV  411 (486)
Q Consensus       376 -------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~  411 (486)
                                                                 .+.|..||+.+++.+.++....... ..+...+.+++
T Consensus       413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~  492 (677)
T 1kb0_A          413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVF  492 (677)
T ss_dssp             ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred             hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEE
Confidence                                                       2789999999999888876432211 23555788899


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCccc-CeEEEE--ecCCEEE-EEeC----------------CCcEEEEeCCC
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGHEE-LVRCIR--FDAKRIV-SGAY----------------DGKIKVWNLVA  466 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~-~v~~~~--~~~~~l~-s~~~----------------dg~v~iwdl~~  466 (486)
                      .++.||.+++||.++|+.+..+..... ...-+.  .+|+.++ +.+.                .+.+..|.+..
T Consensus       493 ~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~  567 (677)
T 1kb0_A          493 QGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG  567 (677)
T ss_dssp             EECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred             EECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence            999999999999999999999874432 222334  3776543 3222                36788888874

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.18  E-value=5.9e-09  Score=96.22  Aligned_cols=221  Identities=10%  Similarity=0.101  Sum_probs=143.3

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      +++++..++....++.++.|   .++....+..+...+.++.|  ++++++++..++.|.+||..+++.......+...+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~   89 (333)
T 2dg1_A           13 YSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANP   89 (333)
T ss_dssp             SCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSE
T ss_pred             ecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCc
Confidence            33444445555667788888   34556666667677788888  57777778888999999999887765544556779


Q ss_pred             EEEEEcCC-eEEEEe-CC----CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC------CCcEEEEE
Q psy9182         318 LHLRFSNG-MMVTCS-KD----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG------DRTIKVWN  383 (486)
Q Consensus       318 ~~~~~~~~-~l~~~~-~d----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------d~~i~iwd  383 (486)
                      .+++++++ .++++. .+    +.|.+||..++....... .......+..+.+  +++++++...      .+.|..+|
T Consensus        90 ~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~  168 (333)
T 2dg1_A           90 AAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS  168 (333)
T ss_dssp             EEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred             ceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence            99999754 444444 44    589999988765431111 1123456777777  5666666543      35677777


Q ss_pred             CCCceEEEEEcCCcccEEEEEeC--CCEEE-EEeCCCcEEEEECCC-CeeeEE--------ecCcccCeEEEEe--cCCE
Q psy9182         384 TSSCEFVRTLNGHKRGIACLQYR--DRLVV-SGSSDNTIRLWDIEC-GACLRV--------LEGHEELVRCIRF--DAKR  449 (486)
Q Consensus       384 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~-~~~~~~--------~~~h~~~v~~~~~--~~~~  449 (486)
                      ..+++... +..+......+.++  ++.|+ +.+.++.|.+||+.+ +..+..        +.++ ..+..+++  +|+.
T Consensus       169 ~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l  246 (333)
T 2dg1_A          169 PDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNL  246 (333)
T ss_dssp             TTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCE
T ss_pred             CCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCE
Confidence            66555433 22233345667664  66554 445678999999964 333221        1222 35678888  6777


Q ss_pred             EEEEeCCCcEEEEeCCC
Q psy9182         450 IVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       450 l~s~~~dg~v~iwdl~~  466 (486)
                      +++...++.|.+||...
T Consensus       247 ~v~~~~~~~v~~~d~~g  263 (333)
T 2dg1_A          247 YVAMYGQGRVLVFNKRG  263 (333)
T ss_dssp             EEEEETTTEEEEECTTS
T ss_pred             EEEEcCCCEEEEECCCC
Confidence            77777789999999853

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.16  E-value=7.5e-08  Score=97.25  Aligned_cols=320  Identities=9%  Similarity=0.071  Sum_probs=187.9

Q ss_pred             CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182         115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       115 ~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      .+..|+.++.++.|.-+|..+|+.+..+..............     ......+.+ .+..++.++.|+.|..+|..+++
T Consensus        65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~v~v~~~dg~l~alD~~tG~  138 (668)
T 1kv9_A           65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCC-----DAVNRGVAL-WGDKVYVGTLDGRLIALDAKTGK  138 (668)
T ss_dssp             ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTT-----CSCCCCCEE-EBTEEEEECTTSEEEEEETTTCC
T ss_pred             ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccc-----cCCccceEE-ECCEEEEEcCCCEEEEEECCCCC
Confidence            355777788899999999999999888764432110000000     000011111 23345666677888888876665


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec------CCeEEEEECCCceeeE
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR------DNTIKVWDRVSLQCIK  268 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~  268 (486)
                      ............         .             .......++    .+..++++..      +|.|..+|..+|+.+.
T Consensus       139 ~~W~~~~~~~~~---------~-------------~~~~~~P~v----~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  192 (668)
T 1kv9_A          139 AIWSQQTTDPAK---------P-------------YSITGAPRV----VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW  192 (668)
T ss_dssp             EEEEEECSCTTS---------S-------------CBCCSCCEE----ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             EeeeeccCCCCC---------c-------------ceecCCCEE----ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence            443221110000         0             000011111    2345555543      5899999999999998


Q ss_pred             EEcCCc---c---------------------------cE-EEEEe--cCCEEEEEeCCC-------------------cE
Q psy9182         269 VLTGHT---G---------------------------SV-LCLQY--DERVIISGSSDS-------------------TV  296 (486)
Q Consensus       269 ~~~~~~---~---------------------------~v-~~~~~--~~~~l~~~~~dg-------------------~i  296 (486)
                      .+....   .                           .+ ..+++  +...++.++.++                   .|
T Consensus       193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v  272 (668)
T 1kv9_A          193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI  272 (668)
T ss_dssp             EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred             EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence            775311   0                           00 12344  457888887766                   39


Q ss_pred             EEEECCCCcEEEEeccc--C-------ccE--EEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeee--------
Q psy9182         297 RVWDVNTGEMVNTLIHH--C-------EAV--LHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLV--------  354 (486)
Q Consensus       297 ~vwd~~~~~~~~~~~~~--~-------~~i--~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------  354 (486)
                      ..+|.++|+.+..++..  .       .+.  ..+.+.+.   .++.++.+|.++++|..+++.+.......        
T Consensus       273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d  352 (668)
T 1kv9_A          273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD  352 (668)
T ss_dssp             EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred             EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence            99999999999887642  1       222  22334443   58889999999999999988652211100        


Q ss_pred             -cCcc--------------------------cEEEEEeCCCEEEEE----------------------------------
Q psy9182         355 -GHRA--------------------------AVNVVDFDEKYIVSA----------------------------------  373 (486)
Q Consensus       355 -~~~~--------------------------~v~~~~~~~~~l~~~----------------------------------  373 (486)
                       ....                          .-.++..+...++..                                  
T Consensus       353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p  432 (668)
T 1kv9_A          353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP  432 (668)
T ss_dssp             TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred             cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence             0000                          001222233333321                                  


Q ss_pred             --eCCCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCccc----CeEEEEec
Q psy9182         374 --SGDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE----LVRCIRFD  446 (486)
Q Consensus       374 --~~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~----~v~~~~~~  446 (486)
                        ..+|.|..||+.+++.+.+...+.... ..+...+.+++.++.||.|+.||.++|+.+..++....    ++.. ..+
T Consensus       433 ~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~-~~~  511 (668)
T 1kv9_A          433 AAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF-ELA  511 (668)
T ss_dssp             GGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EET
T ss_pred             CCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE-EEC
Confidence              124789999999999987776443322 34556788999999999999999999999988865432    2222 336


Q ss_pred             CCE-EEEEeC--------------------CCcEEEEeCCCC
Q psy9182         447 AKR-IVSGAY--------------------DGKIKVWNLVAA  467 (486)
Q Consensus       447 ~~~-l~s~~~--------------------dg~v~iwdl~~~  467 (486)
                      |+. ++.++.                    .+.|.++.+...
T Consensus       512 G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~  553 (668)
T 1kv9_A          512 GRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGK  553 (668)
T ss_dssp             TEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCC
T ss_pred             CEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCcc
Confidence            663 444332                    347888888653

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.14  E-value=7.5e-10  Score=102.05  Aligned_cols=209  Identities=12%  Similarity=0.028  Sum_probs=137.9

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS  323 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~  323 (486)
                      +..+.+++.+  |..+|. +++.+..+.............+..+.+++.++.|..+|.. ++...........+.++...
T Consensus        70 ~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~  145 (330)
T 3hxj_A           70 DGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVS  145 (330)
T ss_dssp             TTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred             CCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEc
Confidence            4456666655  888885 5555433332222222223346778888889999999998 87777666555555555665


Q ss_pred             -CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEE
Q psy9182         324 -NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA  401 (486)
Q Consensus       324 -~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~  401 (486)
                       ++.+++++.++.|..+|.. ++.....   ......+.++.. .+..+..++  +.|..+| .+++...........+.
T Consensus       146 ~~g~l~vgt~~~~l~~~d~~-g~~~~~~---~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~  218 (330)
T 3hxj_A          146 EDGTIYVGSNDNYLYAINPD-GTEKWRF---KTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVT  218 (330)
T ss_dssp             TTSCEEEECTTSEEEEECTT-SCEEEEE---ECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCS
T ss_pred             CCCEEEEEcCCCEEEEECCC-CCEeEEE---ecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCccee
Confidence             5688889989999999988 5543222   122334444555 234455555  7899999 77877777776656677


Q ss_pred             EEEeCC-CEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec-CCEEEEEeCCCcEEEEeC
Q psy9182         402 CLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-AKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       402 ~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~v~iwdl  464 (486)
                      ++..++ ..|..++.++.|..+|. +++.+..+......+.++..+ +..|..++.+|.|..+|.
T Consensus       219 ~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          219 RPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP  282 (330)
T ss_dssp             CCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred             ceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence            777763 37777888888999984 577776666554445556664 667888888988999985

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.13  E-value=5.3e-08  Score=88.86  Aligned_cols=177  Identities=8%  Similarity=0.154  Sum_probs=107.6

Q ss_pred             EEEEecCCeEEEEECCCceeeEE-EcC----CcccEEEEEe--cCCEEEEEeCC---------------CcEEEEECCCC
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKV-LTG----HTGSVLCLQY--DERVIISGSSD---------------STVRVWDVNTG  304 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~-~~~----~~~~v~~~~~--~~~~l~~~~~d---------------g~i~vwd~~~~  304 (486)
                      +.+++..+.|.+||.. ++.... ...    ....+.++.+  ++++.++...+               +.|..||.. +
T Consensus        85 l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g  162 (314)
T 1pjx_A           85 LFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G  162 (314)
T ss_dssp             EEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S
T ss_pred             EEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C
Confidence            3333334466777766 544322 111    1123566666  56666655544               567777765 5


Q ss_pred             cEEEEecccCccEEEEEEc----CC--eEEEE-eCCCcEEEEECC-CCCce--eeEEeeecCc-ccEEEEEe--CCCEEE
Q psy9182         305 EMVNTLIHHCEAVLHLRFS----NG--MMVTC-SKDRSIAVWDMV-SPNEI--TLRRVLVGHR-AAVNVVDF--DEKYIV  371 (486)
Q Consensus       305 ~~~~~~~~~~~~i~~~~~~----~~--~l~~~-~~dg~i~i~d~~-~~~~~--~~~~~~~~~~-~~v~~~~~--~~~~l~  371 (486)
                      +..... .+......++++    ++  .++++ ..++.|.+||+. .+...  ........+. .....+.+  +|++.+
T Consensus       163 ~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v  241 (314)
T 1pjx_A          163 QMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV  241 (314)
T ss_dssp             CEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE
T ss_pred             CEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE
Confidence            543322 223345677777    65  45555 467899999986 33211  1112222232 44566766  677777


Q ss_pred             EEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEE-EEeCCCcEEEEECCC
Q psy9182         372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVV-SGSSDNTIRLWDIEC  426 (486)
Q Consensus       372 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~v~iwd~~~  426 (486)
                      +...++.|.+||..+++.+..+..+...+.++.+  +++.|+ +...++.|..|++..
T Consensus       242 ~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          242 ANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            7778889999999878877777777677888887  467454 445568899999864

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.12  E-value=4.8e-08  Score=91.87  Aligned_cols=230  Identities=11%  Similarity=0.051  Sum_probs=151.7

Q ss_pred             eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC---------cccEEEEEecCCEEEEEeC--CCc
Q psy9182         237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH---------TGSVLCLQYDERVIISGSS--DST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~l~~~~~--dg~  295 (486)
                      -+.+++|+++++++.          .++.|.++|..+++.+..+...         ...-..++.|+++++++..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            577899999888876          4678999999999988877521         1112345558999998864  578


Q ss_pred             EEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEE-eeecCcccE---EEEEeCCCEE
Q psy9182         296 VRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRR-VLVGHRAAV---NVVDFDEKYI  370 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~~~v---~~~~~~~~~l  370 (486)
                      |.+.|+.+++.+.++.....  ..+... +..+++.+.||.+.+.++.+++...... .+......+   ..+..++..+
T Consensus       202 VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~  279 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRL  279 (426)
T ss_dssp             EEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEE
T ss_pred             EEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEE
Confidence            99999999999888765322  222222 3466777889999999985544331100 011111111   1223366776


Q ss_pred             EEEeCCCcEEEEECCCceEE--EEEc------------CCcccEEEEEeCCCEEEEEeC----------CCcEEEEECCC
Q psy9182         371 VSASGDRTIKVWNTSSCEFV--RTLN------------GHKRGIACLQYRDRLVVSGSS----------DNTIRLWDIEC  426 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~~~~~--~~~~------------~~~~~v~~~~~~~~~l~~~~~----------dg~v~iwd~~~  426 (486)
                      +..+..+.+.+.|.......  ..+.            ........+..+++.+++...          ++.|.++|+.+
T Consensus       280 ~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T  359 (426)
T 3c75_H          280 VWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET  359 (426)
T ss_dssp             EEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred             EEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC
Confidence            66677889999998654321  1111            011112355666676665532          35799999999


Q ss_pred             CeeeEEecCcccCeEEEEe--cCC-EEEEEe-CCCcEEEEeCCCCCC
Q psy9182         427 GACLRVLEGHEELVRCIRF--DAK-RIVSGA-YDGKIKVWNLVAALD  469 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~-~dg~v~iwdl~~~~~  469 (486)
                      ++.+..+.... ....+.|  |++ +++++. .++.|.++|+.+...
T Consensus       360 ~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv  405 (426)
T 3c75_H          360 GERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE  405 (426)
T ss_dssp             CCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred             CeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence            99999886432 4677888  888 888888 599999999987653

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.10  E-value=5.4e-08  Score=92.24  Aligned_cols=225  Identities=10%  Similarity=0.123  Sum_probs=144.6

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCC--cEEEEECCCCcEEEEe----
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS--TVRVWDVNTGEMVNTL----  310 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~----  310 (486)
                      -+++.++++++++...++.|++||..+++.............++..+++.|+++..++  .|.++|...+.....+    
T Consensus       135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~  214 (409)
T 3hrp_A          135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLG  214 (409)
T ss_dssp             EEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECC
T ss_pred             EEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeecc
Confidence            3556677887777777799999999988776655543322233444778888888766  7999998766544444    


Q ss_pred             cccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEe-eecCcccE-E-EEEe--C-CCEEEEEeCCCcEEEE
Q psy9182         311 IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRV-LVGHRAAV-N-VVDF--D-EKYIVSASGDRTIKVW  382 (486)
Q Consensus       311 ~~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v-~-~~~~--~-~~~l~~~~~d~~i~iw  382 (486)
                      ........++++++  +.|+++..++.|+.||..++........ ..+....- . .+.+  + +.++++...++.|+.|
T Consensus       215 ~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~  294 (409)
T 3hrp_A          215 STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI  294 (409)
T ss_dssp             TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence            21345567788876  4777777888999999987653211000 11111111 1 5555  3 4455555567889999


Q ss_pred             ECCCceEEEEEcCCc---------------ccEEEEEeC--CCEEEEEe-CCCcEEEEECCCCeeeEEecCc--------
Q psy9182         383 NTSSCEFVRTLNGHK---------------RGIACLQYR--DRLVVSGS-SDNTIRLWDIECGACLRVLEGH--------  436 (486)
Q Consensus       383 d~~~~~~~~~~~~~~---------------~~v~~~~~~--~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h--------  436 (486)
                      +....  +..+.++.               .....++++  ++++++-. .++.|+.|++.+++. ..+.++        
T Consensus       295 ~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~  371 (409)
T 3hrp_A          295 TPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQID  371 (409)
T ss_dssp             CTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCC
T ss_pred             ecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCC
Confidence            97643  33333221               235667764  77777777 789999999887864 344333        


Q ss_pred             -------ccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         437 -------EELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       437 -------~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                             -.....|++  ++..+++-..++.|+.+++
T Consensus       372 g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          372 GTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             BSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence                   235788998  5566666667788888775

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.05  E-value=5.9e-08  Score=98.90  Aligned_cols=174  Identities=14%  Similarity=0.157  Sum_probs=100.7

Q ss_pred             CeEEEEECCCcee--eEEEcC---CcccEEEEEe--cCCEEEEEeC----CCcEEEEECCCCc-EEEEecccCccEEE-E
Q psy9182         254 NTIKVWDRVSLQC--IKVLTG---HTGSVLCLQY--DERVIISGSS----DSTVRVWDVNTGE-MVNTLIHHCEAVLH-L  320 (486)
Q Consensus       254 g~i~i~d~~~~~~--~~~~~~---~~~~v~~~~~--~~~~l~~~~~----dg~i~vwd~~~~~-~~~~~~~~~~~i~~-~  320 (486)
                      ..|++|++.+...  ...+..   |......+.+  |+++|+....    +..|+++|+.++. ....+..+...... +
T Consensus       208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~  287 (693)
T 3iuj_A          208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLV  287 (693)
T ss_dssp             CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEE
T ss_pred             cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEE
Confidence            3588888876542  233332   3334556666  7887755432    2589999998763 33444444444443 3


Q ss_pred             EEcCCeEEEEeC----CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC---cEEEEECCCceEEEEE
Q psy9182         321 RFSNGMMVTCSK----DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR---TIKVWNTSSCEFVRTL  393 (486)
Q Consensus       321 ~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~  393 (486)
                      ...++.++..+.    .+.|..+|+.++....... +..+...+..++++++.|+....++   .|++||+..+. ...+
T Consensus       288 ~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~-l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l  365 (693)
T 3iuj_A          288 DNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD-LIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREV  365 (693)
T ss_dssp             EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE-EECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEE
T ss_pred             eccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE-EecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEe
Confidence            334555554443    3679999998765421112 2233333337777888777665443   68999987543 4455


Q ss_pred             cC-CcccEEEEEe--CCCEEEEEeCC----CcEEEEECCCCee
Q psy9182         394 NG-HKRGIACLQY--RDRLVVSGSSD----NTIRLWDIECGAC  429 (486)
Q Consensus       394 ~~-~~~~v~~~~~--~~~~l~~~~~d----g~v~iwd~~~~~~  429 (486)
                      .. ....+..+.+  ++..++....+    +.|..||+.+++.
T Consensus       366 ~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          366 ALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             CCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             ecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            42 3344555554  34444444333    8899999987764

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.04  E-value=3.8e-07  Score=90.18  Aligned_cols=225  Identities=12%  Similarity=0.062  Sum_probs=143.5

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcc----cEE-EEEecCCEEEEEeC------CCcEEEEECCCCcEEEEec
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVL-CLQYDERVIISGSS------DSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~-~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~  311 (486)
                      .+..+++++.|+.|..+|..+|+.+........    .+. +-...+..+++++.      +|.|..+|.++|+.+.++.
T Consensus       114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~  193 (571)
T 2ad6_A          114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF  193 (571)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence            456788888899999999999998877653220    121 11123456666655      7899999999999988765


Q ss_pred             ccCcc-------------------------------------E-EEEEEcC--CeEEEEeCC----------------Cc
Q psy9182         312 HHCEA-------------------------------------V-LHLRFSN--GMMVTCSKD----------------RS  335 (486)
Q Consensus       312 ~~~~~-------------------------------------i-~~~~~~~--~~l~~~~~d----------------g~  335 (486)
                      .....                                     + ..+++++  +.++.++.+                +.
T Consensus       194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~  273 (571)
T 2ad6_A          194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT  273 (571)
T ss_dssp             SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred             cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence            32111                                     0 1234443  566666542                35


Q ss_pred             EEEEECCCCCceeeEEeeecC--------cccEE-EEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCc------
Q psy9182         336 IAVWDMVSPNEITLRRVLVGH--------RAAVN-VVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHK------  397 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~~~--------~~~v~-~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------  397 (486)
                      |..+|..+++..-..+. ..|        ..++. ....+|+   .++.++.+|.++++|..+++.+..++...      
T Consensus       274 v~Ald~~tG~~~W~~~~-~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~  352 (571)
T 2ad6_A          274 IWGRDLDTGMAKWGYQK-TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK  352 (571)
T ss_dssp             EEEEETTTCCEEEEEES-STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred             EEEEecCCCcEEEEecC-CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence            99999999886543322 111        12222 2223664   57788899999999999999887765321      


Q ss_pred             -------ccE----------------------------EEEEeCCCEEEEEe----------------------------
Q psy9182         398 -------RGI----------------------------ACLQYRDRLVVSGS----------------------------  414 (486)
Q Consensus       398 -------~~v----------------------------~~~~~~~~~l~~~~----------------------------  414 (486)
                             .++                            .++..+..++++..                            
T Consensus       353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~  432 (571)
T 2ad6_A          353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY  432 (571)
T ss_dssp             EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred             cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence                   011                            12222234444432                            


Q ss_pred             ---------CCCcEEEEECCCCeeeEEecCcccCeEE--EEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         415 ---------SDNTIRLWDIECGACLRVLEGHEELVRC--IRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       415 ---------~dg~v~iwd~~~~~~~~~~~~h~~~v~~--~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                               .+|.|..||+.+|+.+..+.... .+.+  +...+..++.++.||.|+.||..++..
T Consensus       433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~  497 (571)
T 2ad6_A          433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE  497 (571)
T ss_dssp             ECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence                     35789999999999988775332 2222  333678888899999999999988753

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.03  E-value=8.7e-07  Score=80.10  Aligned_cols=210  Identities=10%  Similarity=0.074  Sum_probs=131.2

Q ss_pred             EEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc--
Q psy9182         238 YCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH--  312 (486)
Q Consensus       238 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--  312 (486)
                      ..++++ +.++++...++.|..||..+++.. .+. ....+.++.+  ++++++ +. ++.|.+||..+++.......  
T Consensus        18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~   93 (297)
T 3g4e_A           18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDN   93 (297)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCT
T ss_pred             CeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCC
Confidence            345564 445666667889999999887653 333 3456788887  667444 44 56799999988765433321  


Q ss_pred             --cCccEEEEEEcCC-eEEEEeC----------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCC
Q psy9182         313 --HCEAVLHLRFSNG-MMVTCSK----------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGD  376 (486)
Q Consensus       313 --~~~~i~~~~~~~~-~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d  376 (486)
                        ....+..+.++++ .+++++.          ...-.+|.+........   ..........+.+  +++.++ +.+.+
T Consensus        94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~---~~~~~~~pngi~~spdg~~lyv~~~~~  170 (297)
T 3g4e_A           94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK---YFDQVDISNGLDWSLDHKIFYYIDSLS  170 (297)
T ss_dssp             TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE---EEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred             CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE---EeeccccccceEEcCCCCEEEEecCCC
Confidence              1234677888754 4444431          12234444433222211   1122233456666  677665 44557


Q ss_pred             CcEEEEEC--CCceE-----EEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--
Q psy9182         377 RTIKVWNT--SSCEF-----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--  445 (486)
Q Consensus       377 ~~i~iwd~--~~~~~-----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--  445 (486)
                      +.|.+||+  .++..     ...+..+......+.++  |++.++...++.|.+||..+|+.+..+..+...+++++|  
T Consensus       171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g  250 (297)
T 3g4e_A          171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGG  250 (297)
T ss_dssp             TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEES
T ss_pred             CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeC
Confidence            88999987  45543     22233333456667764  777777777889999999999999999888778999999  


Q ss_pred             -cCCEEEEEe
Q psy9182         446 -DAKRIVSGA  454 (486)
Q Consensus       446 -~~~~l~s~~  454 (486)
                       +++.|+.++
T Consensus       251 ~d~~~L~vt~  260 (297)
T 3g4e_A          251 KNYSEMYVTC  260 (297)
T ss_dssp             GGGCEEEEEE
T ss_pred             CCCCEEEEEc
Confidence             345554443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.03  E-value=8.3e-07  Score=87.71  Aligned_cols=286  Identities=10%  Similarity=0.055  Sum_probs=164.5

Q ss_pred             cceEEEeec-Cceeeeccc-ccccceeeecCcccc-e---eEEEeecceeEecCCCCceec-cCcce----eecCCCCCc
Q psy9182         116 EKYIVSASG-DRTIKVWNT-SSCEFVRTLNGHKRG-I---ACLQYRDRLVVSGSSDNTIRY-RDEFQ----IVSSSHDDT  184 (486)
Q Consensus       116 ~~~l~tg~~-dg~v~iWd~-~~~~~~~~l~~h~~~-V---~~~~~~~~~~~~~~~d~~i~~-~~~~~----l~s~s~dg~  184 (486)
                      +..|..++. ++.|.-+|. .+|+.+..+...... .   .+....         .+.+.+ +.+..    ++.++.|+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~---------~~g~av~p~~g~~~~rV~v~t~dg~  132 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLV---------NRGLAYWPGDGKTPALILKTQLDGN  132 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSC---------CCCCEEECCCSSSCCEEEEECTTSE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccccccc---------ccceEEEecCCcceeEEEEEcCCCE
Confidence            456666776 899999999 999998887643211 0   000000         000111 01222    566667777


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------cCCeEEE
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------RDNTIKV  258 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~i  258 (486)
                      +..+|..+++...........                      .........++    .+..+++++      .+|.|+.
T Consensus       133 l~AlDa~TG~~~W~~~~~~~~----------------------~~~~~~ssP~v----~~g~V~vg~~g~e~g~~g~v~A  186 (599)
T 1w6s_A          133 VAALNAETGETVWKVENSDIK----------------------VGSTLTIAPYV----VKDKVIIGSSGAELGVRGYLTA  186 (599)
T ss_dssp             EEEEETTTCCEEEEEECCCGG----------------------GTCBCCSCCEE----ETTEEEECCBCGGGTCCCEEEE
T ss_pred             EEEEECCCCCEEEeecCCCCC----------------------ccceeecCCEE----ECCEEEEEecccccCCCCeEEE
Confidence            777776655543221110000                      00000111111    234555555      3899999


Q ss_pred             EECCCceeeEEEcCCccc----------------------------------------EEEEEecCCEEEEEeCC-----
Q psy9182         259 WDRVSLQCIKVLTGHTGS----------------------------------------VLCLQYDERVIISGSSD-----  293 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~----------------------------------------v~~~~~~~~~l~~~~~d-----  293 (486)
                      +|..+|+.+..+......                                        ..++..+...++.+..+     
T Consensus       187 ~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~  266 (599)
T 1w6s_A          187 YDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWN  266 (599)
T ss_dssp             EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred             EECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcccc
Confidence            999999998877643211                                        01233355677777665     


Q ss_pred             -----------CcEEEEECCCCcEEEEecccC----------ccEE-EEE-EcC---CeEEEEeCCCcEEEEECCCCCce
Q psy9182         294 -----------STVRVWDVNTGEMVNTLIHHC----------EAVL-HLR-FSN---GMMVTCSKDRSIAVWDMVSPNEI  347 (486)
Q Consensus       294 -----------g~i~vwd~~~~~~~~~~~~~~----------~~i~-~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~  347 (486)
                                 +.|..+|.++|+.+..++...          .++. .+. ..+   ..++.++.+|.++++|.++++.+
T Consensus       267 ~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l  346 (599)
T 1w6s_A          267 ETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV  346 (599)
T ss_dssp             GGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             CcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence                       379999999999988775432          1222 111 123   25677889999999999998865


Q ss_pred             eeEEeee----------cCccc----------------------------EEEEEeCCCEEEEE----------------
Q psy9182         348 TLRRVLV----------GHRAA----------------------------VNVVDFDEKYIVSA----------------  373 (486)
Q Consensus       348 ~~~~~~~----------~~~~~----------------------------v~~~~~~~~~l~~~----------------  373 (486)
                      .......          .....                            -.++..+..++++.                
T Consensus       347 w~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~  426 (599)
T 1w6s_A          347 SANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYK  426 (599)
T ss_dssp             EEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCC
T ss_pred             ecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeeccccccc
Confidence            4322110          00000                            01111122222221                


Q ss_pred             -----------------e------CCCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCee
Q psy9182         374 -----------------S------GDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       374 -----------------~------~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                                       +      ..|.|..||+.+++.+.+.+...... ..+...+.+++.++.||.++.||.++|+.
T Consensus       427 ~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~  506 (599)
T 1w6s_A          427 AGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL  506 (599)
T ss_dssp             TTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             CCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence                             1      35789999999999887765322111 22455688888899999999999999999


Q ss_pred             eEEecCc
Q psy9182         430 LRVLEGH  436 (486)
Q Consensus       430 ~~~~~~h  436 (486)
                      +..++..
T Consensus       507 lW~~~l~  513 (599)
T 1w6s_A          507 LWKFKIP  513 (599)
T ss_dssp             EEEEECS
T ss_pred             EEEeeCC
Confidence            9988644

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.03  E-value=1.4e-06  Score=78.57  Aligned_cols=222  Identities=9%  Similarity=0.017  Sum_probs=142.3

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE-Eecc
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN-TLIH  312 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~  312 (486)
                      .+++.+++...++...++.|.+||.. ++.... +......+.++.+  ++++.++...++.|..+|.. ++... ....
T Consensus        24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~  101 (300)
T 2qc5_A           24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQ  101 (300)
T ss_dssp             EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSS
T ss_pred             eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCC
Confidence            34455677777766678999999987 554432 2233356778877  46666665557889999988 65532 2222


Q ss_pred             cCccEEEEEEcC-CeEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182         313 HCEAVLHLRFSN-GMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       313 ~~~~i~~~~~~~-~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      ....+..+++.+ +.++++. .++.|..||.. ++...  .........+..+.+  ++++.++...++.|..+|. +++
T Consensus       102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~  177 (300)
T 2qc5_A          102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE--YDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK  177 (300)
T ss_dssp             TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred             CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE--ccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence            345678888874 3444444 47889999986 44321  112223455677777  5676666656788999998 555


Q ss_pred             EEEE-EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEE-ecCcccCeEEEEe--cCCEEEEEeCCCcEEEE
Q psy9182         389 FVRT-LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRF--DAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       389 ~~~~-~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iw  462 (486)
                      .... ...+...+..+.++  +++.++....+.|.+||. +++.... +..+...+.++++  +++..++...++.|..|
T Consensus       178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~  256 (300)
T 2qc5_A          178 LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRI  256 (300)
T ss_dssp             EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEE
T ss_pred             EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEE
Confidence            4432 22344567777775  666666556778999998 4554433 3344567888998  56655555556889999


Q ss_pred             eCC
Q psy9182         463 NLV  465 (486)
Q Consensus       463 dl~  465 (486)
                      |..
T Consensus       257 ~~~  259 (300)
T 2qc5_A          257 TND  259 (300)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            874

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.00  E-value=1.2e-07  Score=96.61  Aligned_cols=226  Identities=14%  Similarity=0.096  Sum_probs=137.9

Q ss_pred             EEEEeCCCEEEEEe-----cCCeEEEEECCCceeeEE-EcCCcccEEEEEecCCEEEEEeCCCc-------------EEE
Q psy9182         238 YCLQYDDHKIVSGL-----RDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQYDERVIISGSSDST-------------VRV  298 (486)
Q Consensus       238 ~~~~~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~l~~~~~dg~-------------i~v  298 (486)
                      .+++||+++++.+.     ....|++||+.+++.+.. +......-.+.+ |++.|+.++.+..             |++
T Consensus       134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~  212 (693)
T 3iuj_A          134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF  212 (693)
T ss_dssp             EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred             EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence            46889999888543     234799999999986543 221111112344 8998888887743             999


Q ss_pred             EECCCCcE----EEEecc-cCccEEEEEEcCC--eEE-EEeC---CCcEEEEECCCCCceeeEEeeecCcccEE-EEEeC
Q psy9182         299 WDVNTGEM----VNTLIH-HCEAVLHLRFSNG--MMV-TCSK---DRSIAVWDMVSPNEITLRRVLVGHRAAVN-VVDFD  366 (486)
Q Consensus       299 wd~~~~~~----~~~~~~-~~~~i~~~~~~~~--~l~-~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~~  366 (486)
                      |++.++..    +..... +......+.++++  .++ +...   ++.|+++|+.++....  ..+..+..... .+..+
T Consensus       213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~--~~l~~~~~~~~~~~~~~  290 (693)
T 3iuj_A          213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL--LTVQGDLDADVSLVDNK  290 (693)
T ss_dssp             EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC--EEEECSSSSCEEEEEEE
T ss_pred             EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce--EEEeCCCCceEEEEecc
Confidence            99987642    222233 3445678888865  443 3332   3589999998764211  22223333332 24456


Q ss_pred             CCEEEEEe-CC---CcEEEEECCCceE--EEEEcCCcccEEEEEeCCCEEEEEeC-CC--cEEEEECCCCeeeEEec-Cc
Q psy9182         367 EKYIVSAS-GD---RTIKVWNTSSCEF--VRTLNGHKRGIACLQYRDRLVVSGSS-DN--TIRLWDIECGACLRVLE-GH  436 (486)
Q Consensus       367 ~~~l~~~~-~d---~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~-~h  436 (486)
                      +..|+..+ .+   +.|..+|+.++..  ...+..|...+..++++++.|+.... ++  .|++||+..+ ....+. .+
T Consensus       291 g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~  369 (693)
T 3iuj_A          291 GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPG  369 (693)
T ss_dssp             TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSS
T ss_pred             CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCC
Confidence            66555444 33   6799999988654  24455455444477777887776654 44  6899998854 444443 33


Q ss_pred             ccCeEEEEe--cCCEEEEEeCC----CcEEEEeCCCC
Q psy9182         437 EELVRCIRF--DAKRIVSGAYD----GKIKVWNLVAA  467 (486)
Q Consensus       437 ~~~v~~~~~--~~~~l~s~~~d----g~v~iwdl~~~  467 (486)
                      ...+..+.+  +++.|+....+    +.|..||+.++
T Consensus       370 ~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g  406 (693)
T 3iuj_A          370 LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG  406 (693)
T ss_dssp             SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred             CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence            445666666  56655554444    78999998765

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.95  E-value=1.2e-07  Score=87.70  Aligned_cols=270  Identities=8%  Similarity=-0.039  Sum_probs=163.9

Q ss_pred             eeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC----------CCCcceeeeccccccc
Q psy9182         127 TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS----------HDDTILIWDFLNYSET  196 (486)
Q Consensus       127 ~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s----------~dg~i~vWd~~~~~~~  196 (486)
                      .|.+.|..+++.+.++.....+  .+.++               +|+++++.+.          .++.|.+||..+.+..
T Consensus        47 ~vsvID~~t~~v~~~i~vG~~P--~i~~s---------------pDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv  109 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGAFLS--LAVAG---------------HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI  109 (368)
T ss_dssp             EEEEEETTTTEEEEEEEECTTC--EEEEC---------------TTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred             eEEEEECCCCeEEEEEeCCCCC--ceEEC---------------CCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence            7889999999999998754445  67776               5666666554          4788999998765433


Q ss_pred             ccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec--CCeEEE--EECCCceeeEEEcC
Q psy9182         197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR--DNTIKV--WDRVSLQCIKVLTG  272 (486)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--dg~i~i--~d~~~~~~~~~~~~  272 (486)
                      .....+...                      .........-+.+++||++++++..  +..|.+  +|..+   +..+..
T Consensus       110 ~~I~v~~~~----------------------~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v  164 (368)
T 1mda_H          110 ADIELPDAP----------------------RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS  164 (368)
T ss_dssp             EEEEETTSC----------------------SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC
T ss_pred             EEEECCCcc----------------------ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC
Confidence            221100000                      0000123446778999999998874  467888  88877   444432


Q ss_pred             CcccEEEEEec-CCEEEEEeCCCcEEEEECCC-----CcEEEE----ecccCccEEEEEEcCCeEEEEeCCCcEEEEECC
Q psy9182         273 HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNT-----GEMVNT----LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMV  342 (486)
Q Consensus       273 ~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~-----~~~~~~----~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~  342 (486)
                      .. . ..+..+ ...+++.+.||.+.+.|+.+     ++....    +.....+. . ...++.++..+. +.+.+.|..
T Consensus       165 ~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~  239 (368)
T 1mda_H          165 AS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIP  239 (368)
T ss_dssp             SS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECC
T ss_pred             CC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECC
Confidence            11 1 112333 35566677889999999886     332211    11112233 1 223455565566 899999986


Q ss_pred             CCCceeeEEe-----------eecCcccEEEEEeCCCEEEEEeC---------CCcEEEEECCCceEEEEEcCCcccEEE
Q psy9182         343 SPNEITLRRV-----------LVGHRAAVNVVDFDEKYIVSASG---------DRTIKVWNTSSCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       343 ~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~v~~  402 (486)
                      ..........           ..........+..+++.++++..         ++.+.++|+.+.+.+..+.... ....
T Consensus       240 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~g  318 (368)
T 1mda_H          240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDA  318 (368)
T ss_dssp             SSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECE
T ss_pred             CCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-Ccce
Confidence            5432111000           00111122356668887776543         2356799999999988887443 3445


Q ss_pred             EEe--CCC-EEEEEe-CCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         403 LQY--RDR-LVVSGS-SDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       403 ~~~--~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      +.+  +++ ++++.. .++.|.++|+.+++.+..+..... ...+++
T Consensus       319 i~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~  364 (368)
T 1mda_H          319 IIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSV  364 (368)
T ss_dssp             EEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEEC
T ss_pred             EEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEe
Confidence            555  566 566666 599999999999999999875543 334444

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.93  E-value=1.8e-07  Score=94.49  Aligned_cols=226  Identities=12%  Similarity=0.083  Sum_probs=148.1

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCc----ccEEE-EEecCCEEEEEeC------CCcEEEEECCCCcEEEEec
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT----GSVLC-LQYDERVIISGSS------DSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~v~~-~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~  311 (486)
                      .+..+++++.|+.|..+|..+|+.+..+....    ..+.+ -...+..++++..      +|.|..+|.++|+.+..+.
T Consensus       116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~  195 (668)
T 1kv9_A          116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY  195 (668)
T ss_dssp             EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence            46678889999999999999999998776421    11111 1123455666543      5899999999999988775


Q ss_pred             ccC---c----------------------------cEEEEEEc--CCeEEEEeCCC-------------------cEEEE
Q psy9182         312 HHC---E----------------------------AVLHLRFS--NGMMVTCSKDR-------------------SIAVW  339 (486)
Q Consensus       312 ~~~---~----------------------------~i~~~~~~--~~~l~~~~~dg-------------------~i~i~  339 (486)
                      ...   .                            ....++++  .+.+++++.++                   .|..+
T Consensus       196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al  275 (668)
T 1kv9_A          196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI  275 (668)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred             ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence            310   0                            00124554  35888887766                   39999


Q ss_pred             ECCCCCceeeEEeeecCc-------ccE--EEEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCCcc---------
Q psy9182         340 DMVSPNEITLRRVLVGHR-------AAV--NVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGHKR---------  398 (486)
Q Consensus       340 d~~~~~~~~~~~~~~~~~-------~~v--~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---------  398 (486)
                      |..+++..-..+. ..|.       ...  ..+.++++   .++.++.+|.++++|..+|+.+...+....         
T Consensus       276 D~~tG~~~W~~~~-~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~  354 (668)
T 1kv9_A          276 RPDTGKLAWHYQV-TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA  354 (668)
T ss_dssp             CTTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred             cCCCCceeeEeec-CCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence            9999986543332 1121       222  23445775   688999999999999999998854432110         


Q ss_pred             ---cE--------------------------EEEEeCCCEEEEE------------------------------------
Q psy9182         399 ---GI--------------------------ACLQYRDRLVVSG------------------------------------  413 (486)
Q Consensus       399 ---~v--------------------------~~~~~~~~~l~~~------------------------------------  413 (486)
                         ++                          .++..+..++...                                    
T Consensus       355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~  434 (668)
T 1kv9_A          355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA  434 (668)
T ss_dssp             TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred             cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence               00                          1122222333321                                    


Q ss_pred             eCCCcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         414 SSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       414 ~~dg~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ..+|.|..||+.+|+.+.....+.... ..+...+..++.++.||.|+.||.+++..
T Consensus       435 ~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~  491 (668)
T 1kv9_A          435 VVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA  491 (668)
T ss_dssp             GCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             CccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence            134889999999999988876443222 24455888999999999999999988753

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.91  E-value=1.1e-06  Score=86.88  Aligned_cols=223  Identities=11%  Similarity=0.061  Sum_probs=141.1

Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcc----cEEE-EEecCCEEEEEe------CCCcEEEEECCCCcEEEEecccC
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLC-LQYDERVIISGS------SDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~~-~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      ++++++.|+.|..+|..+|+.+........    .+.+ -...+..+++++      .+|.|+.+|.++|+.+..+....
T Consensus       123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~  202 (599)
T 1w6s_A          123 LILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG  202 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence            388888999999999999999877653221    1211 112344566655      37999999999999988775422


Q ss_pred             cc-------------------------------------E-EEEEE--cCCeEEEEeCC----------------CcEEE
Q psy9182         315 EA-------------------------------------V-LHLRF--SNGMMVTCSKD----------------RSIAV  338 (486)
Q Consensus       315 ~~-------------------------------------i-~~~~~--~~~~l~~~~~d----------------g~i~i  338 (486)
                      ..                                     + ..+++  ..+.++.++.+                +.|..
T Consensus       203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A  282 (599)
T 1w6s_A          203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG  282 (599)
T ss_dssp             CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred             CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence            11                                     0 02233  34577777765                37999


Q ss_pred             EECCCCCceeeEEeeecCc--------ccEE-EEE-eCC---CEEEEEeCCCcEEEEECCCceEEEEEcCCc--------
Q psy9182         339 WDMVSPNEITLRRVLVGHR--------AAVN-VVD-FDE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHK--------  397 (486)
Q Consensus       339 ~d~~~~~~~~~~~~~~~~~--------~~v~-~~~-~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------  397 (486)
                      +|..+++..-..+. ..|.        ..+. .+. .+|   ..++.++.+|.++++|.++|+.+.......        
T Consensus       283 ld~~TG~~~W~~q~-~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~  361 (599)
T 1w6s_A          283 RDADTGEAKFGYQK-TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV  361 (599)
T ss_dssp             EETTTCCEEEEEES-STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred             EeCCCCceeeEeec-CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence            99999886543322 2221        1222 222 356   467778899999999999999887654211        


Q ss_pred             -----ccE----------------------------EEEEeCCCEEEEE-------------------------------
Q psy9182         398 -----RGI----------------------------ACLQYRDRLVVSG-------------------------------  413 (486)
Q Consensus       398 -----~~v----------------------------~~~~~~~~~l~~~-------------------------------  413 (486)
                           .++                            .++..+..++++.                               
T Consensus       362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~  441 (599)
T 1w6s_A          362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG  441 (599)
T ss_dssp             CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred             ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence                 000                            0111111222111                               


Q ss_pred             --e------CCCcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         414 --S------SDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       414 --~------~dg~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                        +      .+|.|..||+.+|+.+.......... ..+.-.+..++.++.||.|+.||.+++..
T Consensus       442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~  506 (599)
T 1w6s_A          442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL  506 (599)
T ss_dssp             TTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             CcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence              1      45789999999999988775221111 12445788888899999999999998753

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.91  E-value=7.5e-06  Score=74.98  Aligned_cols=207  Identities=14%  Similarity=0.046  Sum_probs=128.7

Q ss_pred             EEEEeCC-CEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc--
Q psy9182         238 YCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH--  312 (486)
Q Consensus       238 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--  312 (486)
                      .++++++ ..+++...++.|..||..+++... +. ....+.++.+  ++++++ ++.+ .|.+||..+++.......  
T Consensus        54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v-~~~~-gl~~~d~~~g~~~~~~~~~~  129 (326)
T 2ghs_A           54 PTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHAELES  129 (326)
T ss_dssp             EEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEE-EETT-EEEEEETTTCCEEEEECSST
T ss_pred             CeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEE-EECC-CEEEEECCCCcEEEEeeCCC
Confidence            4566664 456666678899999998876543 33 3456888877  565555 4444 499999988876433221  


Q ss_pred             --cCccEEEEEEcCC-eEEEEeC-------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcE
Q psy9182         313 --HCEAVLHLRFSNG-MMVTCSK-------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTI  379 (486)
Q Consensus       313 --~~~~i~~~~~~~~-~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i  379 (486)
                        ....+..+.++++ .+++++.       .+.|..++  +++ ...   ..........+.+  +++.++.+ +.++.|
T Consensus       130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~---~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I  203 (326)
T 2ghs_A          130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTK---LFADISIPNSICFSPDGTTGYFVDTKVNRL  203 (326)
T ss_dssp             TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEE---EEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred             CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEE---eeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence              1235778888754 4444442       24566665  332 211   1112223456666  67766554 456899


Q ss_pred             EEEECC--Cc-e-----EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---c
Q psy9182         380 KVWNTS--SC-E-----FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---D  446 (486)
Q Consensus       380 ~iwd~~--~~-~-----~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~  446 (486)
                      .+||+.  ++ +     ....+.........+.++  |++.++...++.|.+||. +++.+..+..+...+++++|   +
T Consensus       204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d  282 (326)
T 2ghs_A          204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD  282 (326)
T ss_dssp             EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred             EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence            999986  55 3     222333334455667764  676666667789999998 57877888777778999999   3


Q ss_pred             CCEEEEEeC
Q psy9182         447 AKRIVSGAY  455 (486)
Q Consensus       447 ~~~l~s~~~  455 (486)
                      ++.|+.++.
T Consensus       283 ~~~L~vt~~  291 (326)
T 2ghs_A          283 ASRLLVTSA  291 (326)
T ss_dssp             SCEEEEEEB
T ss_pred             CCEEEEEec
Confidence            455654443

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.90  E-value=7.7e-07  Score=84.28  Aligned_cols=181  Identities=13%  Similarity=0.089  Sum_probs=108.9

Q ss_pred             EEEEeCCCEEEEEecCC--eEEEEECCCceeeEEE----cCCcccEEEEEec--CCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         238 YCLQYDDHKIVSGLRDN--TIKVWDRVSLQCIKVL----TGHTGSVLCLQYD--ERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      .+++++++.|+++..++  .|.+++...+.....+    ......+.+++++  +..|+++..++.|+.||..++.....
T Consensus       176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~  255 (409)
T 3hrp_A          176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI  255 (409)
T ss_dssp             CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred             eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence            45666777777776655  6777776655443333    2133445566663  45666677788999999987764322


Q ss_pred             ----ecccCccE--EEEEEcC--CeE-EEEeCCCcEEEEECCCCCceeeEEeeecC---------------cccEEEEEe
Q psy9182         310 ----LIHHCEAV--LHLRFSN--GMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGH---------------RAAVNVVDF  365 (486)
Q Consensus       310 ----~~~~~~~i--~~~~~~~--~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------------~~~v~~~~~  365 (486)
                          .......-  ..+++++  +.| ++-..++.|+.|+....  ..   ...++               -.....+++
T Consensus       256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~  330 (409)
T 3hrp_A          256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CE---WFCGSATQKTVQDGLREEALFAQPNGMTV  330 (409)
T ss_dssp             EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EE---EEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred             ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EE---EEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence                11111111  2788876  344 44456788999987643  11   11111               123566666


Q ss_pred             --CCCEEEEEe-CCCcEEEEECCCceEEEEEcCC---------------cccEEEEEeC--CCEEEEEeCCCcEEEEEC
Q psy9182         366 --DEKYIVSAS-GDRTIKVWNTSSCEFVRTLNGH---------------KRGIACLQYR--DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       366 --~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~---------------~~~v~~~~~~--~~~l~~~~~dg~v~iwd~  424 (486)
                        +|+++++-. .++.|+.||+.+++. ..+.++               -.....++++  +.++++-..++.|+.+++
T Consensus       331 d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          331 DEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             eCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence              677777777 789999999877764 344333               1235566664  555666666677776654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.87  E-value=1.6e-05  Score=82.33  Aligned_cols=317  Identities=8%  Similarity=0.054  Sum_probs=182.0

Q ss_pred             ccccCCccCcceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         107 FISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       107 ~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      +.++...+++.+.+ |..++-+..||..+++..... ..+...|.++..+               .++ .+..++.++-+
T Consensus       175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d---------------~~g-~lwigt~~~Gl  237 (795)
T 4a2l_A          175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQ---------------SPT-RIWVATEGAGL  237 (795)
T ss_dssp             CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEE---------------ETT-EEEEEEBSSCE
T ss_pred             eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEc---------------CCC-CEEEEECCCCe
Confidence            55566666665444 555555888888776543321 1223456666553               122 23334434346


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCc
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSL  264 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~  264 (486)
                      ..||..+............                        ...-....+.++..+ ...+..|+.+ -|.+||..++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~------------------------~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~  292 (795)
T 4a2l_A          238 FLINPKTKEIKNYLHSPSN------------------------PKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTD  292 (795)
T ss_dssp             EEEETTTTEEEEECCCTTC------------------------TTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTT
T ss_pred             EEEeCCCCeEEEeecCCCC------------------------ccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCC
Confidence            6777543222111100000                        000122345666554 3456667766 5889998877


Q ss_pred             eeeEEEcC-------CcccEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEec------ccCccEEEEEEcC-CeEEE
Q psy9182         265 QCIKVLTG-------HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLI------HHCEAVLHLRFSN-GMMVT  329 (486)
Q Consensus       265 ~~~~~~~~-------~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~~~~~i~~~~~~~-~~l~~  329 (486)
                      +.......       ....|.++..| ...+..|+.++-|..|+..++.......      .....|.++..+. +.+.+
T Consensus       293 ~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi  372 (795)
T 4a2l_A          293 SFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI  372 (795)
T ss_dssp             EEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE
T ss_pred             eEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE
Confidence            65443221       23568888874 3457778887789999976654332211      1235688888764 58889


Q ss_pred             EeCCCcEEEEECCCCCceeeEEee-----ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc----CCcc
Q psy9182         330 CSKDRSIAVWDMVSPNEITLRRVL-----VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN----GHKR  398 (486)
Q Consensus       330 ~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~  398 (486)
                      |+.++.|..||..++.........     ......|.++..  +++.|..|+.++-|..||..+++......    ....
T Consensus       373 Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~  452 (795)
T 4a2l_A          373 GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNE  452 (795)
T ss_dssp             EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCS
T ss_pred             EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCC
Confidence            999989999998765432111100     012356778877  45547778887789999998876433222    1345


Q ss_pred             cEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecC------cccCeEEEEec-CCEEEEEeCCCcEEEEeCCCC
Q psy9182         399 GIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG------HEELVRCIRFD-AKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       399 ~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------h~~~v~~~~~~-~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .|.++..+ ...|..|+. +-|.+||..+++.......      +...|.++..| ...|..|+. +.|..||..+.
T Consensus       453 ~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~  527 (795)
T 4a2l_A          453 NVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL  527 (795)
T ss_dssp             CEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT
T ss_pred             eeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC
Confidence            68888875 344555665 4588999887765432211      23568888883 334555555 45888887543

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.87  E-value=5.2e-06  Score=74.97  Aligned_cols=167  Identities=7%  Similarity=-0.010  Sum_probs=103.9

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC----CcccEEEEEe--cCCEEEEEeC-----------CCcEEE
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG----HTGSVLCLQY--DERVIISGSS-----------DSTVRV  298 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~~-----------dg~i~v  298 (486)
                      ..+++.+++++++ +. ++.|.+||..+++.......    ....+..+.+  +|++.++...           .+.|..
T Consensus        57 ~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~  134 (297)
T 3g4e_A           57 SSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS  134 (297)
T ss_dssp             EEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred             EEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence            3445667888544 44 56899999988776543332    1234667777  5675554422           133444


Q ss_pred             EECCCCcEEEEecccCccEEEEEEcCC--eE-EEEeCCCcEEEEECC--CCCcee--eEEeeecCcccEEEEEe--CCCE
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMV--SPNEIT--LRRVLVGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~--~~~~~~--~~~~~~~~~~~v~~~~~--~~~~  369 (486)
                      +|.. ++.. .+.........++|+++  .+ ++.+.++.|..||+.  ++....  ..............+.+  +|++
T Consensus       135 ~d~~-g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l  212 (297)
T 3g4e_A          135 LFPD-HHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL  212 (297)
T ss_dssp             ECTT-SCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE
T ss_pred             EECC-CCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE
Confidence            4443 3332 23333345677888754  44 455667899999973  443211  11112223345566666  6777


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR  406 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  406 (486)
                      .++....+.|..||..+++.+..+..+...+++++|.
T Consensus       213 wva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~  249 (297)
T 3g4e_A          213 WVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG  249 (297)
T ss_dssp             EEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred             EEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence            7777778889999999999999998887788999885

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.85  E-value=2.3e-06  Score=84.63  Aligned_cols=226  Identities=14%  Similarity=0.093  Sum_probs=141.7

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcc----cEEE--EEecC----C-EEEEEeC------CCcEEEEECCCCc
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLC--LQYDE----R-VIISGSS------DSTVRVWDVNTGE  305 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~~--~~~~~----~-~l~~~~~------dg~i~vwd~~~~~  305 (486)
                      .+..+++++.++.|..+|..+|+.+........    .+.+  +..++    + .+++++.      +|.|..+|.++|+
T Consensus       116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~  195 (582)
T 1flg_A          116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE  195 (582)
T ss_dssp             ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred             ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence            355677888899999999999998877654321    1111  11122    2 6666653      7899999999999


Q ss_pred             EEEEecccCccE-----------------------------------------EEEEEc--CCeEEEEeC----------
Q psy9182         306 MVNTLIHHCEAV-----------------------------------------LHLRFS--NGMMVTCSK----------  332 (486)
Q Consensus       306 ~~~~~~~~~~~i-----------------------------------------~~~~~~--~~~l~~~~~----------  332 (486)
                      .+.........+                                         ..++++  .+.++++..          
T Consensus       196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r  275 (582)
T 1flg_A          196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR  275 (582)
T ss_dssp             EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred             EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence            887654321100                                         112333  356776663          


Q ss_pred             ----------C----CcEEEEECCCCCceeeEEeeecC--------cccEEE-EE-eCCC---EEEEEeCCCcEEEEECC
Q psy9182         333 ----------D----RSIAVWDMVSPNEITLRRVLVGH--------RAAVNV-VD-FDEK---YIVSASGDRTIKVWNTS  385 (486)
Q Consensus       333 ----------d----g~i~i~d~~~~~~~~~~~~~~~~--------~~~v~~-~~-~~~~---~l~~~~~d~~i~iwd~~  385 (486)
                                |    +.|..+|..+++..-..+. ..|        ..++.. .. .+|+   .++.++.+|.++++|.+
T Consensus       276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~-~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~  354 (582)
T 1flg_A          276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQH-TPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRS  354 (582)
T ss_dssp             SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEES-STTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETT
T ss_pred             ccCCCcccccCCcccceEEEEeCCCCCEEEEEeC-CCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECC
Confidence                      2    5799999999986643322 222        122322 11 3564   78889999999999999


Q ss_pred             CceEEEEEcCCcc--cEE-------------------------------------------EEEeC--CCEEEEEe----
Q psy9182         386 SCEFVRTLNGHKR--GIA-------------------------------------------CLQYR--DRLVVSGS----  414 (486)
Q Consensus       386 ~~~~~~~~~~~~~--~v~-------------------------------------------~~~~~--~~~l~~~~----  414 (486)
                      +|+.+..+.....  ...                                           .++++  ..++++..    
T Consensus       355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~  434 (582)
T 1flg_A          355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK  434 (582)
T ss_dssp             TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred             CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence            9998876653320  000                                           11222  12222221    


Q ss_pred             -----------------------------CCCcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeC
Q psy9182         415 -----------------------------SDNTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       415 -----------------------------~dg~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl  464 (486)
                                                   .+|.|..||+.+|+.+.......... ..+...+..++.++.||.|+.||.
T Consensus       435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~  514 (582)
T 1flg_A          435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDA  514 (582)
T ss_dssp             EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred             eeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence                                         36889999999999987775432211 123446788888999999999999


Q ss_pred             CCCCC
Q psy9182         465 VAALD  469 (486)
Q Consensus       465 ~~~~~  469 (486)
                      +++..
T Consensus       515 ~tG~~  519 (582)
T 1flg_A          515 KSGKE  519 (582)
T ss_dssp             TTCCE
T ss_pred             CCCCE
Confidence            88763

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.83  E-value=1.8e-05  Score=82.03  Aligned_cols=222  Identities=12%  Similarity=0.118  Sum_probs=142.0

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcC-------CcccEEEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEecc---
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTG-------HTGSVLCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIH---  312 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---  312 (486)
                      ...+.+|+.++-+..||..+++.......       ....|.++..+ ...+..|+.+ -|.+||..+++.......   
T Consensus       225 ~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~  303 (795)
T 4a2l_A          225 PTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVE  303 (795)
T ss_dssp             TTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTS
T ss_pred             CCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCC
Confidence            34566677665699999887765443221       13568888874 4456666666 589999887765443211   


Q ss_pred             ----cCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEee---ecCcccEEEEEeC-CCEEEEEeCCCcEEEEE
Q psy9182         313 ----HCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVL---VGHRAAVNVVDFD-EKYIVSASGDRTIKVWN  383 (486)
Q Consensus       313 ----~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd  383 (486)
                          ....|.++..+. +.+.+|+.++.|..|+.............   .-....|.++..+ ...|..|+.++-|..||
T Consensus       304 ~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~  383 (795)
T 4a2l_A          304 NGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYN  383 (795)
T ss_dssp             TTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEEC
T ss_pred             CCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEc
Confidence                235688888864 58889999899999987654321111000   0123468888874 34577788887899999


Q ss_pred             CCCceEEEEEcC--------CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEec----CcccCeEEEEec-CC
Q psy9182         384 TSSCEFVRTLNG--------HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLE----GHEELVRCIRFD-AK  448 (486)
Q Consensus       384 ~~~~~~~~~~~~--------~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~----~h~~~v~~~~~~-~~  448 (486)
                      ..+++.......        ....|.++..+  ++.|..|+.++-|..||.++++......    .+...|.++..| ..
T Consensus       384 ~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g  463 (795)
T 4a2l_A          384 PITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG  463 (795)
T ss_dssp             TTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred             CCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence            887654332211        23567888774  4547888888889999998776443322    134578888883 33


Q ss_pred             EEEEEeCCCcEEEEeCCCC
Q psy9182         449 RIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       449 ~l~s~~~dg~v~iwdl~~~  467 (486)
                      .|..|+.+ .|.+||..++
T Consensus       464 ~lwigt~~-Gl~~~~~~~~  481 (795)
T 4a2l_A          464 NLWLGTLS-ALVRFNPEQR  481 (795)
T ss_dssp             CEEEEESS-CEEEEETTTT
T ss_pred             CEEEEecC-ceeEEeCCCC
Confidence            45555554 4888887654

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.80  E-value=4.1e-06  Score=72.20  Aligned_cols=186  Identities=13%  Similarity=0.180  Sum_probs=126.9

Q ss_pred             eeeEEEcCCccc--EEEEEe-cCCEEEEEeCCC--cEEEEECCCCcEEEEecccCcc-EEEEEEcCCeEEEEe-CCCcEE
Q psy9182         265 QCIKVLTGHTGS--VLCLQY-DERVIISGSSDS--TVRVWDVNTGEMVNTLIHHCEA-VLHLRFSNGMMVTCS-KDRSIA  337 (486)
Q Consensus       265 ~~~~~~~~~~~~--v~~~~~-~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~-i~~~~~~~~~l~~~~-~dg~i~  337 (486)
                      +.+.++. |...  ...+.+ ++.+..+.+.+|  .|+++|+.+++.+..+...... -..+.+.++.++... .++.+.
T Consensus        32 ~vv~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~  110 (262)
T 3nol_A           32 QIVHSYP-HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF  110 (262)
T ss_dssp             EEEEEEE-CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEEec-CCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence            3455553 4333  356777 455555556655  8999999999999888654332 244667777666655 588999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-----ccEEEEEe-CCCEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-----RGIACLQY-RDRLVV  411 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~-~~~~l~  411 (486)
                      +||..+.+.......  +.  .-..++++++.|+.+..++.|.++|..+.+.+..+....     ..++.+.+ +|.+.+
T Consensus       111 v~D~~t~~~~~ti~~--~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lya  186 (262)
T 3nol_A          111 VWNIRNLRQVRSFNY--DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFA  186 (262)
T ss_dssp             EEETTTCCEEEEEEC--SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred             EEECccCcEEEEEEC--CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEE
Confidence            999999886654332  11  224566788888777778889999999999888876422     22344555 455444


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCc------------ccCeEEEEe--cCCEEEEEeC
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGH------------EELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h------------~~~v~~~~~--~~~~l~s~~~  455 (486)
                      ..-.++.|.+.|.++|+.+..+...            ....+.|++  ++++|+..+.
T Consensus       187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            4446889999999999999887542            134578999  5567776664

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.80  E-value=7.3e-06  Score=80.99  Aligned_cols=142  Identities=14%  Similarity=0.083  Sum_probs=90.8

Q ss_pred             cEEEEECCCCcEEEEeccc----------CccEE-EEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecC----
Q psy9182         295 TVRVWDVNTGEMVNTLIHH----------CEAVL-HLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH----  356 (486)
Q Consensus       295 ~i~vwd~~~~~~~~~~~~~----------~~~i~-~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----  356 (486)
                      .|..+|.++|+.+..++..          ..++. .....+   ..++.++.+|.++++|..+++.+.........    
T Consensus       273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~  352 (571)
T 2ad6_A          273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK  352 (571)
T ss_dssp             EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred             EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence            5999999999998877532          12222 111223   24677888999999999988765332211000    


Q ss_pred             ------cccE----------------------------EEEEeCCCEEEEEe----------------------------
Q psy9182         357 ------RAAV----------------------------NVVDFDEKYIVSAS----------------------------  374 (486)
Q Consensus       357 ------~~~v----------------------------~~~~~~~~~l~~~~----------------------------  374 (486)
                            ..++                            .++..+..++++..                            
T Consensus       353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~  432 (571)
T 2ad6_A          353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY  432 (571)
T ss_dssp             EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred             cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence                  0001                            12223344554432                            


Q ss_pred             ---------CCCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182         375 ---------GDRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       375 ---------~d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                               .++.|..||+.+++.+.++....... ..+...+..++.++.||.|+.+|.++|+.+..+...
T Consensus       433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~  504 (571)
T 2ad6_A          433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP  504 (571)
T ss_dssp             ECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence                     35789999999999887776332211 223445778888999999999999999999888644

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.79  E-value=9.6e-06  Score=70.80  Aligned_cols=190  Identities=7%  Similarity=-0.011  Sum_probs=128.5

Q ss_pred             eEEEEeCCCEEEEEe-c--CCeEEEEECCCceeeEEEcCCc-ccEEEEEecCCEEEEEe-CCCcEEEEECCCCcEEEEec
Q psy9182         237 VYCLQYDDHKIVSGL-R--DNTIKVWDRVSLQCIKVLTGHT-GSVLCLQYDERVIISGS-SDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       237 v~~~~~~~~~l~~~~-~--dg~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~  311 (486)
                      -+.+++++ .|+.++ .  ++.|.++|..+++.+..+.... .....++++++.++.+. .++.+.++|..+.+.+.++.
T Consensus        25 Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~  103 (266)
T 2iwa_A           25 GLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFT  103 (266)
T ss_dssp             EEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEE
T ss_pred             cEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEE
Confidence            34556665 555443 3  5799999999999998875322 22345677666665555 57899999999999998885


Q ss_pred             ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeec--CcccEEEEEe-CCCEEEEEeCCCcEEEEECCCce
Q psy9182         312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG--HRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       312 ~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .....-..++..++.++++..++.|.++|..+.+.......-..  .-.....+.+ ++...+....++.|.+.|..+++
T Consensus       104 ~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~  183 (266)
T 2iwa_A          104 HQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGT  183 (266)
T ss_dssp             CCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCC
T ss_pred             CCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCc
Confidence            43122245777777777777889999999988776544333221  1112455666 55444444467899999999999


Q ss_pred             EEEEEcCCc-------------ccEEEEEeC--C-CEEEEEeCCCcEEEEECCCC
Q psy9182         389 FVRTLNGHK-------------RGIACLQYR--D-RLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       389 ~~~~~~~~~-------------~~v~~~~~~--~-~~l~~~~~dg~v~iwd~~~~  427 (486)
                      .+..+....             .....++++  + .+++++...+.|.+.++...
T Consensus       184 V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          184 LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            998886421             244677775  3 46667777888888887543

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.76  E-value=5.5e-07  Score=83.27  Aligned_cols=193  Identities=11%  Similarity=0.061  Sum_probs=112.0

Q ss_pred             CCeEEEEECCCceeeEEEcCC------cccEEEEEec--CCEEE-EEe---CCCcEEEEECCCCcEEEEecccCccE---
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGH------TGSVLCLQYD--ERVII-SGS---SDSTVRVWDVNTGEMVNTLIHHCEAV---  317 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~--~~~l~-~~~---~dg~i~vwd~~~~~~~~~~~~~~~~i---  317 (486)
                      ++.|.+||..+++.+..+...      ...+..+.++  +..++ +-.   .++.|.+||+.+++..+.+..|....   
T Consensus        92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~  171 (343)
T 2qe8_A           92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED  171 (343)
T ss_dssp             CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred             CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence            578999999988877766532      2234666664  44554 443   57889999999888777665432110   


Q ss_pred             EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC-cEEEEECC---Cce---
Q psy9182         318 LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR-TIKVWNTS---SCE---  388 (486)
Q Consensus       318 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~-~i~iwd~~---~~~---  388 (486)
                      ..+.+.+..+.+...++.+..|.                 ..+..+++  +++.|+.+..++ .+..++..   .+.   
T Consensus       172 ~~~~~~g~~~~~~~~~g~~~~~~-----------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~  234 (343)
T 2qe8_A          172 IDLVIDGVPVQIGQPDGTVIRPH-----------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTD  234 (343)
T ss_dssp             CCCEETTEECBEECTTSCEECCC-----------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCH
T ss_pred             cceeECCEEEEeccCCCceecee-----------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCCh
Confidence            11222333444555666655442                 12334555  788888877665 45555431   110   


Q ss_pred             --EEE--EEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEe--cCCEEEEEeCCCcE
Q psy9182         389 --FVR--TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DAKRIVSGAYDGKI  459 (486)
Q Consensus       389 --~~~--~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~~~dg~v  459 (486)
                        ...  ...++......+++  +|+++++...++.|.+||.++++....... +...+.++++  ++.++++.+..+.+
T Consensus       235 ~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~  314 (343)
T 2qe8_A          235 AELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS  314 (343)
T ss_dssp             HHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred             hhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence              000  11122222233444  588888888899999999866765443332 2456889999  66677776655444


Q ss_pred             EEE
Q psy9182         460 KVW  462 (486)
Q Consensus       460 ~iw  462 (486)
                      .+|
T Consensus       315 ~~f  317 (343)
T 2qe8_A          315 APL  317 (343)
T ss_dssp             GGG
T ss_pred             ccc
Confidence            333

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.74  E-value=2.7e-06  Score=77.19  Aligned_cols=209  Identities=11%  Similarity=0.032  Sum_probs=127.8

Q ss_pred             EEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEeccc-
Q psy9182         238 YCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHH-  313 (486)
Q Consensus       238 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-  313 (486)
                      ..+.++++ +++++..++.|..|+. +++ ...+..+...+..+.+  +++++++...++.|..||.. ++........ 
T Consensus        50 p~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~  126 (305)
T 3dr2_A           50 PAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYA  126 (305)
T ss_dssp             EEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEET
T ss_pred             CeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccC
Confidence            45677887 5677778899999997 444 3444445566778877  57766655556789999986 5543222111 


Q ss_pred             ---CccEEEEEEcCC-eEEE-----EeC-------------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCE
Q psy9182         314 ---CEAVLHLRFSNG-MMVT-----CSK-------------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       314 ---~~~i~~~~~~~~-~l~~-----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~  369 (486)
                         ...+..+.++++ .++.     |..             .+.|..||..+++.....     .......+.+  +++.
T Consensus       127 ~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-----~~~~p~gl~~spdg~~  201 (305)
T 3dr2_A          127 GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-----DLDHPNGLAFSPDEQT  201 (305)
T ss_dssp             TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-----EESSEEEEEECTTSSE
T ss_pred             CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-----cCCCCcceEEcCCCCE
Confidence               123456777643 4444     321             256777887666543221     2223445555  7887


Q ss_pred             EEEEeCC------CcEEEEECCCceEE--EEE-cCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCccc
Q psy9182         370 IVSASGD------RTIKVWNTSSCEFV--RTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE  438 (486)
Q Consensus       370 l~~~~~d------~~i~iwd~~~~~~~--~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~  438 (486)
                      |+.+...      +.|.+||+..+...  ..+ .........+.+  +|+ |.+++.+ .|.+|+. .++.+..+..+. 
T Consensus       202 lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~-~g~~~~~~~~~~-  277 (305)
T 3dr2_A          202 LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDS-DGQLLGHIPTPG-  277 (305)
T ss_dssp             EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECT-TSCEEEEEECSS-
T ss_pred             EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECC-CCCEEEEEECCC-
Confidence            7777665      68999998765411  111 111222333444  466 4444444 4999998 477777776655 


Q ss_pred             CeEEEEe--cCCEEEEEeCCCc
Q psy9182         439 LVRCIRF--DAKRIVSGAYDGK  458 (486)
Q Consensus       439 ~v~~~~~--~~~~l~s~~~dg~  458 (486)
                      .+.+++|  +++.|..++.++.
T Consensus       278 ~~~~~~f~~d~~~L~it~~~~l  299 (305)
T 3dr2_A          278 TASNCTFDQAQQRLFITGGPCL  299 (305)
T ss_dssp             CCCEEEECTTSCEEEEEETTEE
T ss_pred             ceeEEEEeCCCCEEEEEcCCeE
Confidence            5888999  7778888877653

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.74  E-value=1e-05  Score=69.78  Aligned_cols=174  Identities=10%  Similarity=0.068  Sum_probs=119.3

Q ss_pred             EEEeCCCEEEEEecCC--eEEEEECCCceeeEEEcCCcccE-EEEEecCCEEEEEe-CCCcEEEEECCCCcEEEEecccC
Q psy9182         239 CLQYDDHKIVSGLRDN--TIKVWDRVSLQCIKVLTGHTGSV-LCLQYDERVIISGS-SDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      .++ ++.++.+.+.+|  .|+++|+.+++.+..+....... ..+.++++.|.... .++.+.+||..+.+.+.++....
T Consensus        49 ~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~  127 (262)
T 3nol_A           49 FYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG  127 (262)
T ss_dssp             EEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred             EEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC
Confidence            344 555556666666  89999999999998887543322 44677666666655 47899999999999999887543


Q ss_pred             ccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeee-cCc-ccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEE
Q psy9182         315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV-GHR-AAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVR  391 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~-~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~  391 (486)
                      . -..+++.++.++.+..++.|.++|..+.+......... +.. ..++.+.+ +|+..+..-.++.|.+.|.++++.+.
T Consensus       128 e-G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~  206 (262)
T 3nol_A          128 E-GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTG  206 (262)
T ss_dssp             C-CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred             C-ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEE
Confidence            2 24566677777777778889999999887665444322 111 23445666 66555555468899999999999998


Q ss_pred             EEcCC------------cccEEEEEeC--CCEEEEEe
Q psy9182         392 TLNGH------------KRGIACLQYR--DRLVVSGS  414 (486)
Q Consensus       392 ~~~~~------------~~~v~~~~~~--~~~l~~~~  414 (486)
                      .+...            ....+.++++  ++.|++.+
T Consensus       207 ~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          207 IIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             EEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             EEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            88642            1244778885  45555444

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.73  E-value=1.1e-05  Score=69.46  Aligned_cols=174  Identities=11%  Similarity=0.073  Sum_probs=119.5

Q ss_pred             EEEeCC-CEEEEEecCCeEEEEECCCceeeEEEcCCccc-EEEEEecCCEEEE-EeCCCcEEEEECCCCcEEEEecccCc
Q psy9182         239 CLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS-VLCLQYDERVIIS-GSSDSTVRVWDVNTGEMVNTLIHHCE  315 (486)
Q Consensus       239 ~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~  315 (486)
                      .+.+++ .++.+.+.+|.|+++|+.+++.+..+ -.... -..++++++.|.. .-.++.+.+||..+.+.+.++.....
T Consensus        59 GL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e  137 (268)
T 3nok_A           59 GLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE  137 (268)
T ss_dssp             EEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC
T ss_pred             eEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc
Confidence            344444 45556677789999999999998877 32221 2446775554444 44678999999999999999875433


Q ss_pred             cEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecC--cccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         316 AVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       316 ~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                       -..+++.++.|+++..++.|.++|..+.+...........  -..++.+.+ +|+..+..-.+..|.+.|.++++.+..
T Consensus       138 -GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~  216 (268)
T 3nok_A          138 -GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGV  216 (268)
T ss_dssp             -CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEE
T ss_pred             -eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEE
Confidence             3566677888888888999999999988766544432211  123456667 665554444678999999999999888


Q ss_pred             EcCC-------------cccEEEEEeC---CCEEEEEe
Q psy9182         393 LNGH-------------KRGIACLQYR---DRLVVSGS  414 (486)
Q Consensus       393 ~~~~-------------~~~v~~~~~~---~~~l~~~~  414 (486)
                      +...             ....+.++++   ++++++|-
T Consensus       217 Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          217 IDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             EECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            7632             1245788886   35555553

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.73  E-value=1.3e-05  Score=69.94  Aligned_cols=199  Identities=15%  Similarity=0.116  Sum_probs=136.3

Q ss_pred             eeeEEEcCCcc--cEEEEEecC-CEEEEEeC---CCcEEEEECCCCcEEEEecccC-ccEEEEEEcCCeEEEEe-CCCcE
Q psy9182         265 QCIKVLTGHTG--SVLCLQYDE-RVIISGSS---DSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFSNGMMVTCS-KDRSI  336 (486)
Q Consensus       265 ~~~~~~~~~~~--~v~~~~~~~-~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~-~~i~~~~~~~~~l~~~~-~dg~i  336 (486)
                      +.+.++. |..  ....+.+++ ..|+.++.   ++.|.++|+.+++.+..+.... .....+.+.++.++.+. .++.+
T Consensus        10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v   88 (266)
T 2iwa_A           10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIG   88 (266)
T ss_dssp             EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEE
T ss_pred             eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEE
Confidence            4455554 332  346777743 45555542   5799999999999998875322 23346777777666555 57899


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--c---cEEEEEe-CCCEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--R---GIACLQY-RDRLV  410 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l  410 (486)
                      .++|..+.+.......  + ...-..+++|++.++++..++.|.++|.++.+.+..+.-..  .   ....+.+ ++.+.
T Consensus        89 ~viD~~t~~v~~~i~~--g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~ly  165 (266)
T 2iwa_A           89 FIYDRRTLSNIKNFTH--Q-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVW  165 (266)
T ss_dssp             EEEETTTTEEEEEEEC--C-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred             EEEECCCCcEEEEEEC--C-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEE
Confidence            9999988766543322  2 12224577788877777788999999999999888876322  1   2445555 45444


Q ss_pred             EEEeCCCcEEEEECCCCeeeEEecCcc-------------cCeEEEEe--cCCE-EEEEeCCCcEEEEeCCCC
Q psy9182         411 VSGSSDNTIRLWDIECGACLRVLEGHE-------------ELVRCIRF--DAKR-IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~~~~~~~~h~-------------~~v~~~~~--~~~~-l~s~~~dg~v~iwdl~~~  467 (486)
                      +....++.|.+.|.++++.+..+....             ...+.|++  ++++ ++++...+.|.+-++...
T Consensus       166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            444467899999999999998886421             35589999  4554 666667889999998765

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.72  E-value=4.3e-06  Score=72.10  Aligned_cols=184  Identities=13%  Similarity=0.127  Sum_probs=125.4

Q ss_pred             eeeEEEcCCcc--cEEEEEecC-CEEEEEeCCCcEEEEECCCCcEEEEecccCc-cEEEEEEcCCeEEEE-eCCCcEEEE
Q psy9182         265 QCIKVLTGHTG--SVLCLQYDE-RVIISGSSDSTVRVWDVNTGEMVNTLIHHCE-AVLHLRFSNGMMVTC-SKDRSIAVW  339 (486)
Q Consensus       265 ~~~~~~~~~~~--~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~i~~~~~~~~~l~~~-~~dg~i~i~  339 (486)
                      +.+.++. |..  ....+.+++ .+..+.+.+|.|+++|+++++.+..+ .... .-..+.+.++.++.. -.++.+.+|
T Consensus        44 ~Vv~~~p-hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~  121 (268)
T 3nok_A           44 HIIREYP-HATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTW  121 (268)
T ss_dssp             EEEEEEE-CCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEE
T ss_pred             EEEEEEc-CCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEE
Confidence            3445553 333  236778854 45556677789999999999988877 3222 224467777655544 468899999


Q ss_pred             ECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc--c---cEEEEEe-CCCEEEEE
Q psy9182         340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK--R---GIACLQY-RDRLVVSG  413 (486)
Q Consensus       340 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~-~~~~l~~~  413 (486)
                      |..+.+.+.....  .  ..-..++++++.|+.+..++.|.++|..+.+.+.++....  .   .++.+.+ +|.+.+..
T Consensus       122 D~~Tl~~~~ti~~--~--~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv  197 (268)
T 3nok_A          122 SGMPPQRERTTRY--S--GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI  197 (268)
T ss_dssp             ETTTTEEEEEEEC--S--SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred             ECCcCcEEEEEeC--C--CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence            9998876644332  1  2224666888888888889999999999999988876422  2   3455666 45544444


Q ss_pred             eCCCcEEEEECCCCeeeEEecCc-------------ccCeEEEEec--CCEEEEEe
Q psy9182         414 SSDNTIRLWDIECGACLRVLEGH-------------EELVRCIRFD--AKRIVSGA  454 (486)
Q Consensus       414 ~~dg~v~iwd~~~~~~~~~~~~h-------------~~~v~~~~~~--~~~l~s~~  454 (486)
                      -.++.|.+.|.++|+.+..+...             ....+.|+++  +++|+..+
T Consensus       198 w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          198 WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence            46889999999999998887532             1356889993  45555554

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.71  E-value=2.1e-06  Score=79.36  Aligned_cols=223  Identities=8%  Similarity=-0.029  Sum_probs=141.8

Q ss_pred             eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCC---------cccEEEEEecCCEEEEEeC--CCc
Q psy9182         237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGH---------TGSVLCLQYDERVIISGSS--DST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~~~l~~~~~--dg~  295 (486)
                      -..+++++++++++.          .++.|.+||..+++.+..+...         ...-..++.|+++++++..  +..
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~  148 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence            478899999988886          3688999999999999888633         2223556668998888864  457


Q ss_pred             EEE--EECCCCcEEEEecccCccEEEEEEcC-CeEEEEeCCCcEEEEECCC-----CCceeeE-EeeecCcccEEEEEeC
Q psy9182         296 VRV--WDVNTGEMVNTLIHHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVS-----PNEITLR-RVLVGHRAAVNVVDFD  366 (486)
Q Consensus       296 i~v--wd~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~-----~~~~~~~-~~~~~~~~~v~~~~~~  366 (486)
                      +.+  +|..+   +..+.... . ..+...+ ..+++.+.||.+.+.|+.+     ++..... ....-...+. . ..+
T Consensus       149 v~V~~iD~~t---v~~i~v~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~  221 (368)
T 1mda_H          149 AGLSVPGASD---DQLTKSAS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANY  221 (368)
T ss_dssp             EEEEETTTEE---EEEEECSS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETT
T ss_pred             EEEEEEchhh---ceEEECCC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc-c-ccc
Confidence            888  99877   44443211 1 1122222 3556667888888888876     2211000 0000111222 2 445


Q ss_pred             CCEEEEEeCCCcEEEEECCCce--EEEEEcC------------CcccEEEEEeCCCEEEEEeC---------CCcEEEEE
Q psy9182         367 EKYIVSASGDRTIKVWNTSSCE--FVRTLNG------------HKRGIACLQYRDRLVVSGSS---------DNTIRLWD  423 (486)
Q Consensus       367 ~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~------------~~~~v~~~~~~~~~l~~~~~---------dg~v~iwd  423 (486)
                      +..++..+. +.+.+.|..+..  .+..+..            .......+..+++.++++..         ++.+.++|
T Consensus       222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD  300 (368)
T 1mda_H          222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT  300 (368)
T ss_dssp             TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEE
T ss_pred             CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEE
Confidence            666555556 899999986532  3332221            11112456667777776543         23566999


Q ss_pred             CCCCeeeEEecCcccCeEEEEe--cCCE-EEEEe-CCCcEEEEeCCCCC
Q psy9182         424 IECGACLRVLEGHEELVRCIRF--DAKR-IVSGA-YDGKIKVWNLVAAL  468 (486)
Q Consensus       424 ~~~~~~~~~~~~h~~~v~~~~~--~~~~-l~s~~-~dg~v~iwdl~~~~  468 (486)
                      +.+++.+..+.... ....|+|  |+++ +++.. .++.|.++|+.+..
T Consensus       301 ~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k  348 (368)
T 1mda_H          301 ASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ  348 (368)
T ss_dssp             SSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred             CCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence            99999988886543 5778888  7774 66666 59999999998764

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.70  E-value=6.5e-05  Score=77.70  Aligned_cols=232  Identities=14%  Similarity=0.065  Sum_probs=143.2

Q ss_pred             cceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEc--------------CCcccEEEEEec-CCEEEEEeCCCcEEE
Q psy9182         235 KGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLT--------------GHTGSVLCLQYD-ERVIISGSSDSTVRV  298 (486)
Q Consensus       235 ~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------~~~~~v~~~~~~-~~~l~~~~~dg~i~v  298 (486)
                      ..+.++..+ ...+..|+..+-|.++|..+++......              .....|.++..| ...|..|+.++-|..
T Consensus       258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~  337 (781)
T 3v9f_A          258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINF  337 (781)
T ss_dssp             CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEE
T ss_pred             ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEE
Confidence            345555553 4567778875678899987765432211              123568888774 346777887777999


Q ss_pred             EECCCCcEEEEec---------ccCccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-C
Q psy9182         299 WDVNTGEMVNTLI---------HHCEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-E  367 (486)
Q Consensus       299 wd~~~~~~~~~~~---------~~~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~  367 (486)
                      ++..++.......         .....|.++...+ +.+.+|+.++.|..||..++...............|.++..+ .
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~  417 (781)
T 3v9f_A          338 ISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSE  417 (781)
T ss_dssp             ECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTT
T ss_pred             eCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCC
Confidence            9987655433211         1235688888875 688899888889999976532211100011234568888774 4


Q ss_pred             CEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCc-----ccC
Q psy9182         368 KYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGH-----EEL  439 (486)
Q Consensus       368 ~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h-----~~~  439 (486)
                      ..|..|+.++-|..+|..+++......  .....|.++..+ ...|..|+. +-|..||..+++........     ...
T Consensus       418 g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~  496 (781)
T 3v9f_A          418 GNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENF  496 (781)
T ss_dssp             SCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred             CCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccce
Confidence            556667777779999988766432221  234578888886 456777777 56889998876654433222     357


Q ss_pred             eEEEEec-CCEEEEEeCCCcEEEEeCCCC
Q psy9182         440 VRCIRFD-AKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       440 v~~~~~~-~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      |.++..| ...|..|+.++-|..||..+.
T Consensus       497 i~~i~~d~~g~lWigt~~~Gl~~~~~~~~  525 (781)
T 3v9f_A          497 VRSIAQDSEGRFWIGTFGGGVGIYTPDMQ  525 (781)
T ss_dssp             EEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred             eEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence            8888883 344566666445777886543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.68  E-value=4.4e-06  Score=75.78  Aligned_cols=118  Identities=9%  Similarity=0.056  Sum_probs=70.7

Q ss_pred             CcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCC------CcEEEEECCCCCceeeEEee-ecCcccEEEEE
Q psy9182         294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKD------RSIAVWDMVSPNEITLRRVL-VGHRAAVNVVD  364 (486)
Q Consensus       294 g~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~  364 (486)
                      +.|..+|..+++.....  .......++|+++  .++++...      +.|..||+.... +.....+ .........+.
T Consensus       169 ~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~  245 (305)
T 3dr2_A          169 HSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFC  245 (305)
T ss_dssp             EEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEE
T ss_pred             CeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEE
Confidence            46777887666654333  3345667888865  56666654      789999987653 2111111 11122223344


Q ss_pred             e--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCc
Q psy9182         365 F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT  418 (486)
Q Consensus       365 ~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~  418 (486)
                      +  +|+ +.+++.+ .|.+||. .++.+..+..+. .+..+.+  +++.|+.++.++.
T Consensus       246 ~d~~G~-lwv~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l  299 (305)
T 3dr2_A          246 VDRGGW-LWSSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL  299 (305)
T ss_dssp             ECTTSC-EEECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred             ECCCCC-EEEecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence            4  677 4444444 4999998 577777776555 4666676  5677887776543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.66  E-value=5.3e-05  Score=69.30  Aligned_cols=169  Identities=8%  Similarity=0.006  Sum_probs=97.8

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcC----CcccEEEEEe--cCCEEEEEeC------CCcEEEEECCCCcEE
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG----HTGSVLCLQY--DERVIISGSS------DSTVRVWDVNTGEMV  307 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~~------dg~i~vwd~~~~~~~  307 (486)
                      +.++++++++ +. ..|.+||..+++.......    ....+.++.+  +|+++++...      .+.|..+|  +++..
T Consensus        97 ~~~dg~l~v~-~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~  172 (326)
T 2ghs_A           97 KISDSKQLIA-SD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT  172 (326)
T ss_dssp             EEETTEEEEE-ET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE
T ss_pred             EeCCCeEEEE-EC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE
Confidence            3455555443 33 3477888777665433221    1234667777  5665554432      24566666  45443


Q ss_pred             EEecccCccEEEEEEcCC--eEEE-EeCCCcEEEEECC--CC-Cce--eeEEeeecCcccEEEEEe--CCCEEEEEeCCC
Q psy9182         308 NTLIHHCEAVLHLRFSNG--MMVT-CSKDRSIAVWDMV--SP-NEI--TLRRVLVGHRAAVNVVDF--DEKYIVSASGDR  377 (486)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~--~l~~-~~~dg~i~i~d~~--~~-~~~--~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~  377 (486)
                       .+.........++|+++  .++. .+.++.|.+||+.  ++ ...  ...............+.+  +|++.++...++
T Consensus       173 -~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~  251 (326)
T 2ghs_A          173 -KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG  251 (326)
T ss_dssp             -EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred             -EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence             23223345667888754  4544 4557899999986  44 211  111112222344556666  677777666678


Q ss_pred             cEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEEEEe
Q psy9182         378 TIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGS  414 (486)
Q Consensus       378 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~  414 (486)
                      .|..||. +++.+..+..+...+.++++.   ++.|++++
T Consensus       252 ~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          252 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             EEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             EEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence            8999998 677777887777778888874   34554444

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.64  E-value=3.3e-05  Score=66.00  Aligned_cols=186  Identities=13%  Similarity=0.138  Sum_probs=126.5

Q ss_pred             eeeEEEcCCcc--cEEEEEecCCEEEEE-eCC--CcEEEEECCCCcEEEEecccCcc-EEEEEEcCCeEEEE-eCCCcEE
Q psy9182         265 QCIKVLTGHTG--SVLCLQYDERVIISG-SSD--STVRVWDVNTGEMVNTLIHHCEA-VLHLRFSNGMMVTC-SKDRSIA  337 (486)
Q Consensus       265 ~~~~~~~~~~~--~v~~~~~~~~~l~~~-~~d--g~i~vwd~~~~~~~~~~~~~~~~-i~~~~~~~~~l~~~-~~dg~i~  337 (486)
                      +.+.++. |..  ....+.+++..|..+ +.+  ..|+.+|+.+++.+..+...... -..+.+.++.++.. -.++.+.
T Consensus        10 ~v~~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~   88 (243)
T 3mbr_X           10 RVVKRYP-HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF   88 (243)
T ss_dssp             EEEEEEE-CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred             EEEEEcC-CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence            4455553 443  346788866655554 443  48999999999999887654332 24456667755554 4688999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCc-----ccEEEEEeC-CCEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-----RGIACLQYR-DRLVV  411 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~-~~~l~  411 (486)
                      +||..+.+.......  +  ..-..++.++..|+.+..++.|.++|..+.+.+.++....     ..++.+.+. |.+.+
T Consensus        89 v~D~~tl~~~~ti~~--~--~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya  164 (243)
T 3mbr_X           89 VYDLATLTPRARFRY--P--GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA  164 (243)
T ss_dssp             EEETTTTEEEEEEEC--S--SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred             EEECCcCcEEEEEeC--C--CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence            999988876543332  1  1224667788877777788999999999999888877432     234556664 55444


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCc-------------ccCeEEEEe--cCCEEEEEeC
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGH-------------EELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h-------------~~~v~~~~~--~~~~l~s~~~  455 (486)
                      ..-.+..|.+.|.++|+.+..+...             ....+.|++  ++++|...+.
T Consensus       165 nvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          165 NVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             EECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            4446889999999999999887522             135678999  4566666664

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.63  E-value=4.5e-05  Score=65.17  Aligned_cols=175  Identities=11%  Similarity=0.049  Sum_probs=118.1

Q ss_pred             EEEEeCCCEEEEE-ecC--CeEEEEECCCceeeEEEcCCcccE-EEEEecCCEEEEE-eCCCcEEEEECCCCcEEEEecc
Q psy9182         238 YCLQYDDHKIVSG-LRD--NTIKVWDRVSLQCIKVLTGHTGSV-LCLQYDERVIISG-SSDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       238 ~~~~~~~~~l~~~-~~d--g~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      .-+.+++..|..+ +.+  ..|+.+|+.+++.+..+....... ..+..+++.|... -.++.+.+||..+.+.+.++..
T Consensus        24 qGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~  103 (243)
T 3mbr_X           24 EGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRY  103 (243)
T ss_dssp             EEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEEC
T ss_pred             ccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeC
Confidence            3445555555544 443  489999999999998876443322 4456655555544 4578999999999999999876


Q ss_pred             cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecC--cccEEEEEe-CCCEEEEEeCCCcEEEEECCCceE
Q psy9182         313 HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGH--RAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEF  389 (486)
Q Consensus       313 ~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~  389 (486)
                      .... ..++..++.|+++..++.|.++|..+.+...........  -..++.+.+ +|+..+..-.+..|.+.|.++++.
T Consensus       104 ~~~G-wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V  182 (243)
T 3mbr_X          104 PGEG-WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKV  182 (243)
T ss_dssp             SSCC-CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBE
T ss_pred             CCCc-eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCE
Confidence            4433 466677777888878999999999988766544332211  123456666 565555554678999999999999


Q ss_pred             EEEEcCC------------c-ccEEEEEeC--CC-EEEEE
Q psy9182         390 VRTLNGH------------K-RGIACLQYR--DR-LVVSG  413 (486)
Q Consensus       390 ~~~~~~~------------~-~~v~~~~~~--~~-~l~~~  413 (486)
                      +..+...            . ...+.++++  ++ ++++|
T Consensus       183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            9887622            1 245778885  34 44444

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.62  E-value=9.4e-05  Score=76.47  Aligned_cols=231  Identities=10%  Similarity=-0.010  Sum_probs=141.6

Q ss_pred             cceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEc---------CCcccEEEEEecC-CEEEEEeCCCcEEEEECCC
Q psy9182         235 KGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLT---------GHTGSVLCLQYDE-RVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       235 ~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~  303 (486)
                      ..+.++..| ...|.+|+.++-|..++..+........         .....|.++..+. ..|..|+.++-|..||..+
T Consensus       313 ~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~  392 (781)
T 3v9f_A          313 ASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGK  392 (781)
T ss_dssp             SCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTE
T ss_pred             CeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCC
Confidence            345555554 3457788878889999877654332211         1234688888853 5677788667799999875


Q ss_pred             CcEEEEe---cccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC-CCEEEEEeCCCc
Q psy9182         304 GEMVNTL---IHHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD-EKYIVSASGDRT  378 (486)
Q Consensus       304 ~~~~~~~---~~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~  378 (486)
                      +......   ......|.++... ++.+.+|+.++.+..+|..+++... ..........|.++..+ ...+..|+. +-
T Consensus       393 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~~g~lwigt~-~G  470 (781)
T 3v9f_A          393 RVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDKNKKIWIGTH-AG  470 (781)
T ss_dssp             EEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECTTSEEEEEET-TE
T ss_pred             CeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECCCCCEEEEEC-Cc
Confidence            5432211   1234568888876 5688889888889999987653211 11001134567888774 456666766 56


Q ss_pred             EEEEECCCceEEEEEcCC-----cccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEec-CC
Q psy9182         379 IKVWNTSSCEFVRTLNGH-----KRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRFD-AK  448 (486)
Q Consensus       379 i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~~-~~  448 (486)
                      |..+|..+++........     ...|.++..+ ...|..|+.++-|..||..+++.......   ....|.++..| ..
T Consensus       471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g  550 (781)
T 3v9f_A          471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKG  550 (781)
T ss_dssp             EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTS
T ss_pred             eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCC
Confidence            899998876654333222     3568888775 34566677655578899876654332211   13468888883 33


Q ss_pred             EEEEEeCCCcEEEEeCCCC
Q psy9182         449 RIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       449 ~l~s~~~dg~v~iwdl~~~  467 (486)
                      .|..++.+|.|..||..+.
T Consensus       551 ~lWi~T~~Glv~~~d~~~~  569 (781)
T 3v9f_A          551 QMWLATGEGLVCFPSARNF  569 (781)
T ss_dssp             CEEEEETTEEEEESCTTTC
T ss_pred             CEEEEECCCceEEECCCCC
Confidence            4555555665488887654

>2p64_A F-BOX/WD repeat protein 1A; right handed super-helical bundle, ligase; 2.50A {Homo sapiens}

Probab=98.42  E-value=1.5e-07  Score=56.39  Aligned_cols=51  Identities=69%  Similarity=1.357  Sum_probs=46.8

Q ss_pred             CccchhhhhHHHHHhccCChhhHHHHHHHHHHhhccCCchhhhhhhccccc
Q psy9182          54 APQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQ  104 (486)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (486)
                      .+.+..+.+.+++.|.+|++..|.+++.+++.++|++++++++.+++|+++
T Consensus         2 ~~~y~~e~~~cl~~f~~Wse~eQvdfv~~L~~rm~hyQ~g~In~~L~PmLq   52 (52)
T 2p64_A            2 AASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQ   52 (52)
T ss_dssp             CCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTSCHHHHHHHHHHHGGGTC
T ss_pred             cchHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhHHHHHHHHhhcccccC
Confidence            345778889999999999999999999999999999999999999999864

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.35  E-value=0.00047  Score=64.35  Aligned_cols=161  Identities=14%  Similarity=0.177  Sum_probs=100.0

Q ss_pred             CCeEEEEECCCceeeEEEcCCccc---EEEE--EecCCEEEEEe-------------------CCCcEEEEECCCCcEEE
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGS---VLCL--QYDERVIISGS-------------------SDSTVRVWDVNTGEMVN  308 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~---v~~~--~~~~~~l~~~~-------------------~dg~i~vwd~~~~~~~~  308 (486)
                      .|.|.++|..+++.+..+......   -..+  ..+++.+++..                   .+.+|.+||+.+++.+.
T Consensus       163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~  242 (462)
T 2ece_A          163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH  242 (462)
T ss_dssp             CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred             CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence            378999999999999888632222   1234  44778888774                   36899999999998888


Q ss_pred             EecccC--ccEEEEEE--cCC--eEEEEe------CCCcEEEEECCCCCceeeEEee--ecC----------------cc
Q psy9182         309 TLIHHC--EAVLHLRF--SNG--MMVTCS------KDRSIAVWDMVSPNEITLRRVL--VGH----------------RA  358 (486)
Q Consensus       309 ~~~~~~--~~i~~~~~--~~~--~l~~~~------~dg~i~i~d~~~~~~~~~~~~~--~~~----------------~~  358 (486)
                      ++....  .....+.|  +++  ++++++      .++.|.+|....+. ....+..  ...                ..
T Consensus       243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~  321 (462)
T 2ece_A          243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPP  321 (462)
T ss_dssp             EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECC
T ss_pred             EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCC
Confidence            876531  23445655  654  455444      56788877665432 2111111  000                12


Q ss_pred             cEEE--EEeCCCEEEEEeC-CCcEEEEECC---CceEEEEEcCC----------------cccEEEEEeCCCEEEEEe
Q psy9182         359 AVNV--VDFDEKYIVSASG-DRTIKVWNTS---SCEFVRTLNGH----------------KRGIACLQYRDRLVVSGS  414 (486)
Q Consensus       359 ~v~~--~~~~~~~l~~~~~-d~~i~iwd~~---~~~~~~~~~~~----------------~~~v~~~~~~~~~l~~~~  414 (486)
                      ....  ++.|+++|+++.. .+.|.+||+.   +.+.+..+...                ...-..++.+|++|+++.
T Consensus       322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            2333  4448998888764 6889999985   34556655432                112345556799888887

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.33  E-value=0.0014  Score=57.80  Aligned_cols=217  Identities=10%  Similarity=0.035  Sum_probs=124.6

Q ss_pred             EEEEEecCCeEEEEECCCcee-----eEEEcCCcccEEEEEec--CCEEEEE-eCCCcEEEEECCCCcEEEEecccCccE
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQC-----IKVLTGHTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEAV  317 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~i  317 (486)
                      +|+.+.. +.|+.+++.....     ...+......+..++++  ++.|+.+ ..++.|..+|...+.....+.......
T Consensus         3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p   81 (267)
T 1npe_A            3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP   81 (267)
T ss_dssp             EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred             EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence            3444443 4688887765432     11122122345677773  4555544 456899999997665443333333466


Q ss_pred             EEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCCceE
Q psy9182         318 LHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNTSSCEF  389 (486)
Q Consensus       318 ~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~~~~~~  389 (486)
                      ..+++++  +.++.+ ...+.|.++++.......   ...........+.+  ++..|+.+..   .+.|..+++.... 
T Consensus        82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~---~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-  157 (267)
T 1npe_A           82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV---LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-  157 (267)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred             cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE---EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence            7888864  455544 456789999986543221   11111234456666  4566665554   3688888876432 


Q ss_pred             EEEEc-CCcccEEEEEeC--CCEE-EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEe-CCCcEEEEeC
Q psy9182         390 VRTLN-GHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA-YDGKIKVWNL  464 (486)
Q Consensus       390 ~~~~~-~~~~~v~~~~~~--~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~-~dg~v~iwdl  464 (486)
                      ...+. ........++++  +..| ++-...+.|.++|.........+.. ......++.++..|+.+. .++.|..+|.
T Consensus       158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~  236 (267)
T 1npe_A          158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDL  236 (267)
T ss_dssp             CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred             cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence            23322 222345666664  5555 4455668999999975444333332 233467778777766665 4588999998


Q ss_pred             CCCC
Q psy9182         465 VAAL  468 (486)
Q Consensus       465 ~~~~  468 (486)
                      .++.
T Consensus       237 ~~g~  240 (267)
T 1npe_A          237 AISK  240 (267)
T ss_dssp             TTTE
T ss_pred             CCCC
Confidence            7654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.29  E-value=0.00061  Score=63.58  Aligned_cols=209  Identities=13%  Similarity=0.161  Sum_probs=125.0

Q ss_pred             CCCEE-EEEecCCeEEEEECCCc----eeeEEEc-------CCcccEEEEE--ecCCEEEEEeCC------CcEEEEECC
Q psy9182         243 DDHKI-VSGLRDNTIKVWDRVSL----QCIKVLT-------GHTGSVLCLQ--YDERVIISGSSD------STVRVWDVN  302 (486)
Q Consensus       243 ~~~~l-~~~~~dg~i~i~d~~~~----~~~~~~~-------~~~~~v~~~~--~~~~~l~~~~~d------g~i~vwd~~  302 (486)
                      ++++| +.+..++.|.++|+.+.    +..+++.       .....-..+.  .++ .++++..+      |.|.++|.+
T Consensus        94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred             cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence            45554 45667789999998765    6666663       0111222233  366 66666555      789999999


Q ss_pred             CCcEEEEecccCcc---EEEEEEcC--CeEEEEe-------------------CCCcEEEEECCCCCceeeEEeeec-Cc
Q psy9182         303 TGEMVNTLIHHCEA---VLHLRFSN--GMMVTCS-------------------KDRSIAVWDMVSPNEITLRRVLVG-HR  357 (486)
Q Consensus       303 ~~~~~~~~~~~~~~---i~~~~~~~--~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~~-~~  357 (486)
                      +++.+.++......   -..+.|++  +.+++..                   .+..|.+||+.+++......  .+ ..
T Consensus       173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~--vg~~g  250 (462)
T 2ece_A          173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT--LGEEN  250 (462)
T ss_dssp             TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE--SCTTE
T ss_pred             CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe--cCCCC
Confidence            99999988643222   23466665  3566653                   37899999998864433222  22 11


Q ss_pred             ccEEEEEe----CCCEEEEEe------CCCcEEEEECCCceE--EEEE--cCC----------------cccEEE--EEe
Q psy9182         358 AAVNVVDF----DEKYIVSAS------GDRTIKVWNTSSCEF--VRTL--NGH----------------KRGIAC--LQY  405 (486)
Q Consensus       358 ~~v~~~~~----~~~~l~~~~------~d~~i~iwd~~~~~~--~~~~--~~~----------------~~~v~~--~~~  405 (486)
                      .....+.|    +++++++++      .+++|.+|....++.  ...+  ...                ......  ++.
T Consensus       251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~  330 (462)
T 2ece_A          251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL  330 (462)
T ss_dssp             EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred             CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence            23333433    678877766      566887766554432  1111  110                112333  455


Q ss_pred             CCCEEEEEeC-CCcEEEEECC---CCeeeEEecCcc--------------cCeEEEEe--cCCEEEEEe
Q psy9182         406 RDRLVVSGSS-DNTIRLWDIE---CGACLRVLEGHE--------------ELVRCIRF--DAKRIVSGA  454 (486)
Q Consensus       406 ~~~~l~~~~~-dg~v~iwd~~---~~~~~~~~~~h~--------------~~v~~~~~--~~~~l~s~~  454 (486)
                      ++++|.++.. .+.|.+||+.   +.+.+..+....              ..-..+.+  ||++|+++.
T Consensus       331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            7888877775 6899999985   235555553320              02355666  999999988

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.25  E-value=8.4e-05  Score=75.07  Aligned_cols=173  Identities=10%  Similarity=0.042  Sum_probs=90.9

Q ss_pred             eCCCEEEEEe-cC-----CeEEEEECCCceeeEEEcCC-------cccEEEEEecCCEEEEEeCC---------CcEEEE
Q psy9182         242 YDDHKIVSGL-RD-----NTIKVWDRVSLQCIKVLTGH-------TGSVLCLQYDERVIISGSSD---------STVRVW  299 (486)
Q Consensus       242 ~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~l~~~~~d---------g~i~vw  299 (486)
                      ++++.++.|+ .+     ..+.+||..+.+-... ...       ...-..+..++...+.|+.+         ..+..|
T Consensus       296 ~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~-~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y  374 (656)
T 1k3i_A          296 SDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL-PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY  374 (656)
T ss_dssp             TTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE-TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred             cCCeEEEEeCcccCCcccccceEeCCCCCcceeC-CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeee
Confidence            4889999988 34     5799999987663332 100       00000011244444444433         357889


Q ss_pred             ECCCCcEEEEecccCc---------cEEEEEE---cCCeEEEEeCCC-----------cEEEEECCCCCceeeE-Eeeec
Q psy9182         300 DVNTGEMVNTLIHHCE---------AVLHLRF---SNGMMVTCSKDR-----------SIAVWDMVSPNEITLR-RVLVG  355 (486)
Q Consensus       300 d~~~~~~~~~~~~~~~---------~i~~~~~---~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~-~~~~~  355 (486)
                      |..+............         .-.++.+   .+..++.|+.++           .|.+||..+..-.... ..+..
T Consensus       375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~  454 (656)
T 1k3i_A          375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF  454 (656)
T ss_dssp             ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS
T ss_pred             ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC
Confidence            9887765433322111         2233333   234666666432           6778887765432111 01112


Q ss_pred             CcccEEEEEe-CCCEEEEEeCC-----------CcEEEEECCCceEEEE--EcCCccc--EEEEEeCCCEEEEEeC
Q psy9182         356 HRAAVNVVDF-DEKYIVSASGD-----------RTIKVWNTSSCEFVRT--LNGHKRG--IACLQYRDRLVVSGSS  415 (486)
Q Consensus       356 ~~~~v~~~~~-~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~--~~~~~~~--v~~~~~~~~~l~~~~~  415 (486)
                      ......++.. +++.++.|+.+           ..+.+||..+.+-...  +......  ...+..++++++.|+.
T Consensus       455 ~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          455 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            2223334444 88999988754           4689999887653321  1111111  2222348899999885

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.23  E-value=0.00075  Score=61.40  Aligned_cols=224  Identities=11%  Similarity=0.104  Sum_probs=128.4

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc-C------------------CcccEEEEEec--CCEEEEEeCCCcE
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT-G------------------HTGSVLCLQYD--ERVIISGSSDSTV  296 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~------------------~~~~v~~~~~~--~~~l~~~~~dg~i  296 (486)
                      .++.++++.++++..++.|..||..+++...... .                  ....+..+.++  +..|+++...+.|
T Consensus        24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i  103 (322)
T 2fp8_A           24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHL  103 (322)
T ss_dssp             EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEE
T ss_pred             EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCE
Confidence            4456677778888889999999987654332111 0                  01246777774  4667777666668


Q ss_pred             EEEECCCCcEEEEec---c-cCccEEEEEEcC--CeEEEEeC------------------CCcEEEEECCCCCceeeEEe
Q psy9182         297 RVWDVNTGEMVNTLI---H-HCEAVLHLRFSN--GMMVTCSK------------------DRSIAVWDMVSPNEITLRRV  352 (486)
Q Consensus       297 ~vwd~~~~~~~~~~~---~-~~~~i~~~~~~~--~~l~~~~~------------------dg~i~i~d~~~~~~~~~~~~  352 (486)
                      ..+|..+++......   . .......+++.+  +.++++..                  ++.|..||..+++.......
T Consensus       104 ~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~  183 (322)
T 2fp8_A          104 SVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE  183 (322)
T ss_dssp             EEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE
T ss_pred             EEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC
Confidence            899977654321111   1 113456777765  35555443                  26688888765542211111


Q ss_pred             eecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCCce--EEEEEcCCcccEEEEEeC--CCEEEEEeC----------
Q psy9182         353 LVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYR--DRLVVSGSS----------  415 (486)
Q Consensus       353 ~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~--~~~l~~~~~----------  415 (486)
                          ......+++  +++.|+.+ ...+.|..|++....  ....+....+ ...+..+  |++.++...          
T Consensus       184 ----~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~  258 (322)
T 2fp8_A          184 ----LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRV  258 (322)
T ss_dssp             ----ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCE
T ss_pred             ----CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCC
Confidence                112233455  67766655 456889999987421  1111111112 4556664  666555544          


Q ss_pred             CCcEEEEECCCCeeeEEecCcc----cCeEEEEe-cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         416 DNTIRLWDIECGACLRVLEGHE----ELVRCIRF-DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       416 dg~v~iwd~~~~~~~~~~~~h~----~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .+.|..+|.. ++.+..+....    ..++++.+ +++.+++...++.|..+++...
T Consensus       259 ~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~  314 (322)
T 2fp8_A          259 DPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK  314 (322)
T ss_dssp             EEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred             ccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence            4678888875 77777775432    35677777 4444455556788999998644

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.22  E-value=1.8e-05  Score=73.06  Aligned_cols=212  Identities=13%  Similarity=0.060  Sum_probs=124.0

Q ss_pred             ceEEEEeCCCEEEEEe--cCCeEEEEECCCceeeEEEc-------CCcccEEEEEecC-CEEEEEeC------CCcEEEE
Q psy9182         236 GVYCLQYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLT-------GHTGSVLCLQYDE-RVIISGSS------DSTVRVW  299 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~-~~l~~~~~------dg~i~vw  299 (486)
                      .-++++++++.+++..  .++.++||.+.+++.. .+.       .+...+..+.++. ..|+....      ++.|.+|
T Consensus        20 ~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~   98 (343)
T 2qe8_A           20 GNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAW   98 (343)
T ss_dssp             EEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEE
T ss_pred             ceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEE
Confidence            3455667888887753  2342444444355432 221       2345678888842 34444432      4789999


Q ss_pred             ECCCCcEEEEeccc------CccEEEEEEcC--CeEEEEe----CCCcEEEEECCCCCceeeEEeeecCcccE---EEEE
Q psy9182         300 DVNTGEMVNTLIHH------CEAVLHLRFSN--GMMVTCS----KDRSIAVWDMVSPNEITLRRVLVGHRAAV---NVVD  364 (486)
Q Consensus       300 d~~~~~~~~~~~~~------~~~i~~~~~~~--~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v---~~~~  364 (486)
                      |+.+++.+..+...      ......+++++  +.++++.    .++.|.+||+.+++..   +...+|....   ..+.
T Consensus        99 d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~---r~~~~~~~~~~~~~~~~  175 (343)
T 2qe8_A           99 DTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA---RVLQGYPGIAPEDIDLV  175 (343)
T ss_dssp             ETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE---EECTTCTTTSCCSCCCE
T ss_pred             ECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE---EEecCCCccccccccee
Confidence            99999877766432      23457788873  4554443    5789999999877543   3332321110   2234


Q ss_pred             eCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCC-cEEEEECC---CCe-----eeE--
Q psy9182         365 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN-TIRLWDIE---CGA-----CLR--  431 (486)
Q Consensus       365 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-~v~iwd~~---~~~-----~~~--  431 (486)
                      +++..+.+.+.++.+..|..              .+..+++  +++.|+.+..++ .|..++..   .+.     ...  
T Consensus       176 ~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T 2qe8_A          176 IDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKI  241 (343)
T ss_dssp             ETTEECBEECTTSCEECCCC--------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred             ECCEEEEeccCCCceeceec--------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcce
Confidence            46767777777777765531              2344555  577788777665 45544431   110     000  


Q ss_pred             EecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCC
Q psy9182         432 VLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       432 ~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ...++......+++  +|+.+++...++.|.+||..
T Consensus       242 ~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~  277 (343)
T 2qe8_A          242 ERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA  277 (343)
T ss_dssp             EEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred             EecccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence            11123334556777  77888888888999999983

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.20  E-value=0.00027  Score=69.90  Aligned_cols=192  Identities=14%  Similarity=0.061  Sum_probs=124.0

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCccc---------EEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS---------VLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---------v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      +..+++++.++.|..+|..+|+.+..+......         ...+...+..++.++.|+.|..+|.++|+.+.......
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~  147 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFAD  147 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCC
Confidence            455666666455999999999998877643221         02234467788889999999999999999988765432


Q ss_pred             c----cEE-EEEEcCC------eEEEEe------CCCcEEEEECCCCCceeeEEeeecC---------------------
Q psy9182         315 E----AVL-HLRFSNG------MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGH---------------------  356 (486)
Q Consensus       315 ~----~i~-~~~~~~~------~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~---------------------  356 (486)
                      .    .+. .....++      .+++++      .++.|+.+|..+++..-.......+                     
T Consensus       148 ~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~  227 (582)
T 1flg_A          148 HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWP  227 (582)
T ss_dssp             GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSC
T ss_pred             CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCC
Confidence            1    111 1112233      666665      3789999999998865322210000                     


Q ss_pred             -c------------------ccEEEEEeCCCEEEEEeC--------------------C----CcEEEEECCCceEEEEE
Q psy9182         357 -R------------------AAVNVVDFDEKYIVSASG--------------------D----RTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       357 -~------------------~~v~~~~~~~~~l~~~~~--------------------d----~~i~iwd~~~~~~~~~~  393 (486)
                       .                  -...++......++.+..                    |    +.|..+|..+|+.+-.+
T Consensus       228 ~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~  307 (582)
T 1flg_A          228 DDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFY  307 (582)
T ss_dssp             BCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEE
T ss_pred             CccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEE
Confidence             0                  001122334566666653                    2    57999999999998887


Q ss_pred             cC--Cc--------ccEEE-EE-eCC---CEEEEEeCCCcEEEEECCCCeeeEEecC
Q psy9182         394 NG--HK--------RGIAC-LQ-YRD---RLVVSGSSDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       394 ~~--~~--------~~v~~-~~-~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~  435 (486)
                      +.  |.        .++.. .. .+|   ..++.++.+|.++++|.++|+.+..+..
T Consensus       308 q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~  364 (582)
T 1flg_A          308 QHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF  364 (582)
T ss_dssp             ESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             eCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence            53  21        22221 11 356   3788899999999999999999877654

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.18  E-value=0.00032  Score=70.81  Aligned_cols=218  Identities=11%  Similarity=0.007  Sum_probs=119.3

Q ss_pred             EEEEeCCCEEEEEec-CCeEEEEECCCceeeEE--EcCCcccEEEEEe-cCCEEEEEe-CC-----CcEEEEECCCCcEE
Q psy9182         238 YCLQYDDHKIVSGLR-DNTIKVWDRVSLQCIKV--LTGHTGSVLCLQY-DERVIISGS-SD-----STVRVWDVNTGEMV  307 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~-~~~~l~~~~-~d-----g~i~vwd~~~~~~~  307 (486)
                      .++..+++.+++|+. ++.+.+||..+.+-...  +......-.+... +++.++.|+ .+     ..+.+||..+++..
T Consensus       248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~  327 (656)
T 1k3i_A          248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT  327 (656)
T ss_dssp             EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred             ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence            445578999999984 45899999877653322  1211222334455 889999988 34     56999999887644


Q ss_pred             EEe----c-ccCccEEEEE-EcCCeEEEEeCC---------CcEEEEECCCCCceeeEEeeec------CcccEEEEE--
Q psy9182         308 NTL----I-HHCEAVLHLR-FSNGMMVTCSKD---------RSIAVWDMVSPNEITLRRVLVG------HRAAVNVVD--  364 (486)
Q Consensus       308 ~~~----~-~~~~~i~~~~-~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~------~~~~v~~~~--  364 (486)
                      ..-    . .....-.++. ..+..++.|+.+         ..+..||..+............      ....-.++.  
T Consensus       328 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~  407 (656)
T 1k3i_A          328 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD  407 (656)
T ss_dssp             EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred             eCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEecc
Confidence            320    0 0000000000 112233444433         4578888877653322111111      011223333  


Q ss_pred             -eCCCEEEEEeCCC-----------cEEEEECCCceEEEEE--cCCc--ccEEEEEe-CCCEEEEEeCC-----------
Q psy9182         365 -FDEKYIVSASGDR-----------TIKVWNTSSCEFVRTL--NGHK--RGIACLQY-RDRLVVSGSSD-----------  416 (486)
Q Consensus       365 -~~~~~l~~~~~d~-----------~i~iwd~~~~~~~~~~--~~~~--~~v~~~~~-~~~~l~~~~~d-----------  416 (486)
                       .+++.++.|+.++           .+.+||..+.+.....  ..+.  ....++.. ++++++.|+.+           
T Consensus       408 ~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~  487 (656)
T 1k3i_A          408 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV  487 (656)
T ss_dssp             TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred             CCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcc
Confidence             2677788877532           6888888876544332  1122  22343444 78999998854           


Q ss_pred             CcEEEEECCCCeeeE--EecCcccCeEEEEe--cCCEEEEEeC
Q psy9182         417 NTIRLWDIECGACLR--VLEGHEELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       417 g~v~iwd~~~~~~~~--~~~~h~~~v~~~~~--~~~~l~s~~~  455 (486)
                      ..+.+||..+++-..  .+........+..+  +++.++.||.
T Consensus       488 ~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          488 FTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             cceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            568999997765322  11111122223333  8899999885

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.11  E-value=0.0041  Score=54.69  Aligned_cols=204  Identities=11%  Similarity=0.034  Sum_probs=121.1

Q ss_pred             EEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEE-eCCCcEEEEECCCCcEEEEeccc
Q psy9182         238 YCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISG-SSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       238 ~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      .++.++++.|+.+ ..++.|..++.........+.........+++  ++..++.+ ...+.|.++++............
T Consensus        41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~  120 (267)
T 1npe_A           41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG  120 (267)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred             EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC
Confidence            4455555555544 45679999998766544444333245567777  34555544 45678999998754332222222


Q ss_pred             CccEEEEEEcC--CeEEEEeC---CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECC
Q psy9182         314 CEAVLHLRFSN--GMMVTCSK---DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTS  385 (486)
Q Consensus       314 ~~~i~~~~~~~--~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~  385 (486)
                      ......+++++  +.++.+..   .+.|..+++...... .  ...........+++  +++.|+.+. ..+.|.++|..
T Consensus       121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~-~--~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~  197 (267)
T 1npe_A          121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-I--LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA  197 (267)
T ss_dssp             CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-E--EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE-E--EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence            24567888875  46665554   368888887643321 1  11122234556666  456665544 56789999997


Q ss_pred             CceEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEecCccc-CeEEEEe
Q psy9182         386 SCEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLEGHEE-LVRCIRF  445 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~h~~-~v~~~~~  445 (486)
                      .......+.. ......++.++..|..+. ..+.|.++|..+++.+..+..... ....|++
T Consensus       198 g~~~~~~~~~-~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~  258 (267)
T 1npe_A          198 QPGRRKVLEG-LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITI  258 (267)
T ss_dssp             EEEEEEEEEC-CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEE
T ss_pred             CCceEEEecC-CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeee
Confidence            6544333332 223345666666655555 568999999999998888864331 2444544

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.07  E-value=0.00055  Score=61.62  Aligned_cols=224  Identities=13%  Similarity=0.193  Sum_probs=126.6

Q ss_pred             CCCEEEEEe-cC-----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCCc---E
Q psy9182         243 DDHKIVSGL-RD-----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTGE---M  306 (486)
Q Consensus       243 ~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~---~  306 (486)
                      ++..++.|+ .+     ..+.+||..+.+-...  +........++..++..++.|+.+     ..+.+||..+++   .
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W   93 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW   93 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence            445566666 33     3688999887653321  111112223344577788888765     469999998776   3


Q ss_pred             EEE--ecccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC---
Q psy9182         307 VNT--LIHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD---  376 (486)
Q Consensus       307 ~~~--~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d---  376 (486)
                      ...  +.........+...+..++.|+.+     ..+.+||+.+.+-.. ............++..+++.++.|+.+   
T Consensus        94 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~  172 (301)
T 2vpj_A           94 YSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSM-LGDMQTAREGAGLVVASGVIYCLGGYDGLN  172 (301)
T ss_dssp             EEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEE-EEECSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred             EECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEE-CCCCCCCcccceEEEECCEEEEECCCCCCc
Confidence            322  222222223333444455566543     368899987754322 122222223333444577777777654   


Q ss_pred             --CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeEE--ecCcccCeEEEEe
Q psy9182         377 --RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRF  445 (486)
Q Consensus       377 --~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~h~~~v~~~~~  445 (486)
                        ..+.+||+.+.+-...  +........++..++.+++.|+.+     ..+.+||+.+.+-...  +.........+..
T Consensus       173 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~  252 (301)
T 2vpj_A          173 ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL  252 (301)
T ss_dssp             BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred             ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE
Confidence              4688999887654332  222222334556678888888764     4689999987653322  2212222344455


Q ss_pred             cCCEEEEEeCC-----CcEEEEeCCCC
Q psy9182         446 DAKRIVSGAYD-----GKIKVWNLVAA  467 (486)
Q Consensus       446 ~~~~l~s~~~d-----g~v~iwdl~~~  467 (486)
                      +++.++.|+.+     ..|.+||+.+.
T Consensus       253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          253 RGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            88888888766     35788888754

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.06  E-value=0.0007  Score=65.52  Aligned_cols=222  Identities=12%  Similarity=0.074  Sum_probs=137.7

Q ss_pred             CCCEEEEEec-CCeEEEEECCCceeeEEEcCC-cccEEEEE----ecCCEEEEEe------------------CCCcEEE
Q psy9182         243 DDHKIVSGLR-DNTIKVWDRVSLQCIKVLTGH-TGSVLCLQ----YDERVIISGS------------------SDSTVRV  298 (486)
Q Consensus       243 ~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~----~~~~~l~~~~------------------~dg~i~v  298 (486)
                      ||+++++... ++.|.+.|+.+.++.+.+.-. ......+.    .+++++++++                  .++.+.+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            7888777665 457999999999988855422 23455555    3788888884                  2467999


Q ss_pred             EECCCCcEEEEecccCccEEEEEE--cCCeEEEEeCCC--------------------------------------cEEE
Q psy9182         299 WDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKDR--------------------------------------SIAV  338 (486)
Q Consensus       299 wd~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~dg--------------------------------------~i~i  338 (486)
                      +|..+.+...++.... .-..+++  .++++++.+.+.                                      .|.+
T Consensus       180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V  258 (595)
T 1fwx_A          180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV  258 (595)
T ss_dssp             EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred             EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence            9999998888775322 1222333  344555555332                                      4667


Q ss_pred             EECCC--CCceeeEEeeecCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCce------------EEEEEcCCcccEEEE
Q psy9182         339 WDMVS--PNEITLRRVLVGHRAAVNVVDFDEKYIVSAS-GDRTIKVWNTSSCE------------FVRTLNGHKRGIACL  403 (486)
Q Consensus       339 ~d~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~iwd~~~~~------------~~~~~~~~~~~v~~~  403 (486)
                      .|.++  +... ......+....-..+++||+++++++ .+.+|.++|+.+.+            .+..+... .....+
T Consensus       259 ID~~~~~~~~~-~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~  336 (595)
T 1fwx_A          259 VDGRKEASSLF-TRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHT  336 (595)
T ss_dssp             EECSGGGCCSS-EEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEE
T ss_pred             EeCcccCCcee-EEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceE
Confidence            77766  3221 11222222333334555899877766 57899999998653            23333322 234455


Q ss_pred             Ee--CCCEEEEEeCCCcEEEEECCC----------CeeeEEecCcccCe-EEE------EecCCEEEEEeC---CCcE--
Q psy9182         404 QY--RDRLVVSGSSDNTIRLWDIEC----------GACLRVLEGHEELV-RCI------RFDAKRIVSGAY---DGKI--  459 (486)
Q Consensus       404 ~~--~~~~l~~~~~dg~v~iwd~~~----------~~~~~~~~~h~~~v-~~~------~~~~~~l~s~~~---dg~v--  459 (486)
                      .|  +|...++...|+.|.+||+.+          .+.+..+..|-.+- .+.      ..||++|+++..   |..+  
T Consensus       337 aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~  416 (595)
T 1fwx_A          337 AFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNV  416 (595)
T ss_dssp             EECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCC
T ss_pred             EECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccC
Confidence            55  474455666899999999976          56777777665432 111      128999998864   3321  


Q ss_pred             --------EEEeCCCC
Q psy9182         460 --------KVWNLVAA  467 (486)
Q Consensus       460 --------~iwdl~~~  467 (486)
                              .++|+..+
T Consensus       417 gp~~~~~~ql~dis~~  432 (595)
T 1fwx_A          417 GPLKPENDQLIDISGD  432 (595)
T ss_dssp             CSSCCEEEEEEECSSS
T ss_pred             CCCCCCcceEEEcCCC
Confidence                    78888543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.05  E-value=0.00092  Score=60.16  Aligned_cols=224  Identities=14%  Similarity=0.165  Sum_probs=125.2

Q ss_pred             CCCEEEEEecC----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCCcEEEEe-
Q psy9182         243 DDHKIVSGLRD----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTGEMVNTL-  310 (486)
Q Consensus       243 ~~~~l~~~~~d----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~-  310 (486)
                      ++..++.|+.+    ..+.+||..+.+-...  +......-.++..++..++.|+.+     ..+.+||..+.+....- 
T Consensus        15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~   94 (302)
T 2xn4_A           15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN   94 (302)
T ss_dssp             CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred             CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence            34456666643    3688899887653322  111111122334477778887755     35889999877643322 


Q ss_pred             -cccCccEEEEEEcCCeEEEEeCCC-----cEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-------C
Q psy9182         311 -IHHCEAVLHLRFSNGMMVTCSKDR-----SIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-------R  377 (486)
Q Consensus       311 -~~~~~~i~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-------~  377 (486)
                       .........+.+.+..++.|+.++     .+.+||+.+.+-.. ............++..+++.++.|+.+       .
T Consensus        95 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~  173 (302)
T 2xn4_A           95 MRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS  173 (302)
T ss_dssp             CSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred             CCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence             111222233344555666676543     57788887654221 111222222333444577777776542       4


Q ss_pred             cEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeEE--ecCcccCeEEEEecCC
Q psy9182         378 TIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRFDAK  448 (486)
Q Consensus       378 ~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~  448 (486)
                      .+.+||+.+.+-...  +........++..++.+++.|+.+     ..+.+||+.+.+-...  +......-..+..++.
T Consensus       174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~  253 (302)
T 2xn4_A          174 TVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGL  253 (302)
T ss_dssp             CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred             EEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCE
Confidence            588999987654332  222222334556678888888764     4689999987643221  2111122234445888


Q ss_pred             EEEEEeCCC-----cEEEEeCCCC
Q psy9182         449 RIVSGAYDG-----KIKVWNLVAA  467 (486)
Q Consensus       449 ~l~s~~~dg-----~v~iwdl~~~  467 (486)
                      .++.|+.++     .+.+||+.+.
T Consensus       254 i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          254 LYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             EEEECCBCSSSBCCCEEEEETTTT
T ss_pred             EEEECCcCCCcccccEEEEcCCCC
Confidence            888888664     4899998765

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.96  E-value=0.0018  Score=58.19  Aligned_cols=188  Identities=14%  Similarity=0.166  Sum_probs=107.4

Q ss_pred             EEeCCCEEEEEecC-----CeEEEEECCCce---eeE--EEcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCC
Q psy9182         240 LQYDDHKIVSGLRD-----NTIKVWDRVSLQ---CIK--VLTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTG  304 (486)
Q Consensus       240 ~~~~~~~l~~~~~d-----g~i~i~d~~~~~---~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~  304 (486)
                      ...++..++.|+.+     ..+.+||..+.+   -..  .+........++..++..++.|+.+     ..+.+||+.+.
T Consensus        59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~  138 (301)
T 2vpj_A           59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNID  138 (301)
T ss_dssp             EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCC
Confidence            34577777888765     468999987755   222  2221122223344477777777654     35889998877


Q ss_pred             cEEEE--ecccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182         305 EMVNT--LIHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-  376 (486)
Q Consensus       305 ~~~~~--~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-  376 (486)
                      +....  +.........+...+..++.|+.+     ..+.+||+.+.+-.. ............++..++..++.|+.+ 
T Consensus       139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~  217 (301)
T 2vpj_A          139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN-VTPMATKRSGAGVALLNDHIYVVGGFDG  217 (301)
T ss_dssp             EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred             eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEe-CCCCCcccccceEEEECCEEEEEeCCCC
Confidence            54332  222222223333444466666543     468899987764221 111222222334445577777777653 


Q ss_pred             ----CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCe
Q psy9182         377 ----RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGA  428 (486)
Q Consensus       377 ----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~  428 (486)
                          ..+.+||+.+.+-...  +........++..++++++.|+.+     ..|.+||+++.+
T Consensus       218 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          218 TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             CcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence                4689999987654332  222222334555678888888765     457888987654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.94  E-value=0.0014  Score=59.05  Aligned_cols=222  Identities=11%  Similarity=0.200  Sum_probs=125.9

Q ss_pred             CEEEEEec--CCeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC----CcEEEEECCCCcEEEEe--cccC
Q psy9182         245 HKIVSGLR--DNTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD----STVRVWDVNTGEMVNTL--IHHC  314 (486)
Q Consensus       245 ~~l~~~~~--dg~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~--~~~~  314 (486)
                      ..++.|+.  ...+.+||..+.+-...  +......-.++..++..++.|+.+    ..+.+||..+++....-  ....
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r   92 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR   92 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence            34555654  35789999887653321  111112223444577788888755    67889999887643322  2212


Q ss_pred             ccEEEEEEcCCeEEEEeCC------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC---------CCcE
Q psy9182         315 EAVLHLRFSNGMMVTCSKD------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG---------DRTI  379 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---------d~~i  379 (486)
                      .....+...+..++.|+.+      ..+.+||..+.+-.. ............++..+++.++.|+.         -..+
T Consensus        93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~  171 (306)
T 3ii7_A           93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT-KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSC  171 (306)
T ss_dssp             BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCE
T ss_pred             cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe-CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceE
Confidence            2223334445566666654      468899988764221 11122222233344457777777653         3458


Q ss_pred             EEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCee--eEEecCcccCeEEEEecCCEE
Q psy9182         380 KVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGAC--LRVLEGHEELVRCIRFDAKRI  450 (486)
Q Consensus       380 ~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l  450 (486)
                      .+||+.+.+-...  +......-.++..++++++.|+.+     ..+.+||+.+.+=  +..+........++..++..+
T Consensus       172 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~  251 (306)
T 3ii7_A          172 EVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVY  251 (306)
T ss_dssp             EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEE
T ss_pred             EEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEE
Confidence            8999988653322  222222334455577777777654     4688999987542  222222222344555588888


Q ss_pred             EEEeCC-----CcEEEEeCCCC
Q psy9182         451 VSGAYD-----GKIKVWNLVAA  467 (486)
Q Consensus       451 ~s~~~d-----g~v~iwdl~~~  467 (486)
                      +.|+.+     ..+.+||+.+.
T Consensus       252 v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          252 VLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             EEECBCSSSBCCEEEEEETTTT
T ss_pred             EEeCcCCCeeeeeEEEEcCCCC
Confidence            888854     46888998774

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.91  E-value=0.015  Score=54.25  Aligned_cols=217  Identities=11%  Similarity=0.020  Sum_probs=122.5

Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEE-EEEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF  322 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~  322 (486)
                      +|+.+ ....|+.+++........+.. ......++|+  +..| ++-...+.|..+++........+.........+++
T Consensus        89 ~l~~~-~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav  166 (386)
T 3v65_B           89 VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV  166 (386)
T ss_dssp             EEEEE-CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred             eeEee-cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence            34433 345788888877665554443 3446778874  3444 44456788999998866544433332233344555


Q ss_pred             c--CCeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CC-CcEEEEECCCceEEEEEcC
Q psy9182         323 S--NGMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GD-RTIKVWNTSSCEFVRTLNG  395 (486)
Q Consensus       323 ~--~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~  395 (486)
                      +  .+.| ++-...+.|.+.++.......   .....-.....+++  .+..|+.+. .. +.|..+++...........
T Consensus       167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~---l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~  243 (386)
T 3v65_B          167 DWVHDKLYWTDSGTSRIEVANLDGAHRKV---LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT  243 (386)
T ss_dssp             ETTTTEEEEEETTTTEEEECBTTSCSCEE---EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred             EeCCCeEEEEcCCCCeEEEEeCCCCceEE---eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence            4  3444 455556788888876543221   12222234455555  355555444 34 6788888765433333333


Q ss_pred             CcccEEEEEeC--CC-EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCCC
Q psy9182         396 HKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       396 ~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~  467 (486)
                      .......++++  +. +.++-+..+.|..+|+........+.........|++++.. +++-...+.|..++..++
T Consensus       244 ~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G  319 (386)
T 3v65_B          244 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG  319 (386)
T ss_dssp             SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence            33345666664  44 44555567889999987443333343334456677774444 555556777888884443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.90  E-value=0.0035  Score=60.75  Aligned_cols=217  Identities=12%  Similarity=0.082  Sum_probs=137.7

Q ss_pred             EEEEecCCeEEEEECCCceeeEEEcC---------------------------------Ccc-cE-------EEEEe---
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVLTG---------------------------------HTG-SV-------LCLQY---  282 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~~~---------------------------------~~~-~v-------~~~~~---  282 (486)
                      +.+|+..|.++|+-+.+++.++.+..                                 +.. .+       ..+++   
T Consensus        18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g   97 (595)
T 1fwx_A           18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   97 (595)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred             EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence            67899999999999888877766520                                 000 11       45566   


Q ss_pred             --cCCEEEEEeC-CCcEEEEECCCCcEEEEeccc-CccEEEEEEc----CCeEEEEe------------------CCCcE
Q psy9182         283 --DERVIISGSS-DSTVRVWDVNTGEMVNTLIHH-CEAVLHLRFS----NGMMVTCS------------------KDRSI  336 (486)
Q Consensus       283 --~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~~----~~~l~~~~------------------~dg~i  336 (486)
                        ||+++++... ++.|.+.|+.+.++...+.-. ......+++.    .+++++++                  .++.+
T Consensus        98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v  177 (595)
T 1fwx_A           98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  177 (595)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred             CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence              6777777665 456999999999988755322 2446677762    34777774                  24578


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC--------------------------------------c
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR--------------------------------------T  378 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~--------------------------------------~  378 (486)
                      .++|..+.+...  +...+....-..+..+|+++++++.+.                                      .
T Consensus       178 tvID~~t~~v~~--qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~  255 (595)
T 1fwx_A          178 TAVDADKWEVAW--QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  255 (595)
T ss_dssp             EEEETTTTEEEE--EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEECCCCeEEE--EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence            999998765443  222222333345566888888887543                                      3


Q ss_pred             EEEEECCC--ceE-EEEEcC-CcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCe------------eeEEecCcccCeE
Q psy9182         379 IKVWNTSS--CEF-VRTLNG-HKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGA------------CLRVLEGHEELVR  441 (486)
Q Consensus       379 i~iwd~~~--~~~-~~~~~~-~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~------------~~~~~~~h~~~v~  441 (486)
                      |.+.|.++  ++. +..+.. ....-..++++|+++++++ .+.+|.++|+.+.+            .+..+. -.....
T Consensus       256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~  334 (595)
T 1fwx_A          256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL  334 (595)
T ss_dssp             EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred             EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence            56666665  333 334432 1222244556788766655 68999999998653            233332 234577


Q ss_pred             EEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         442 CIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       442 ~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .++|  +|...++.--|++|.+||++.
T Consensus       335 h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          335 HTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             eEEECCCCeEEEEEecCCcEEEEEhhH
Confidence            8888  673345566799999999986

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.84  E-value=0.017  Score=52.93  Aligned_cols=155  Identities=9%  Similarity=-0.010  Sum_probs=86.5

Q ss_pred             eEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEe-CC-CcEEEEECCCCcEEEEec
Q psy9182         237 VYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS-SD-STVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       237 v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d-g~i~vwd~~~~~~~~~~~  311 (486)
                      -+++.+.+..| ++-...+.|.+.+.........+.........++++  +..|+... .. +.|..+++..........
T Consensus       120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~  199 (349)
T 3v64_C          120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD  199 (349)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred             EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence            45566644444 455556789999887554333343333445666664  44444443 34 778888876433322222


Q ss_pred             ccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCc
Q psy9182         312 HHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       312 ~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~  387 (486)
                      ..-.....+++++  +.|+.+ ...+.|..+|+.......   ...........+++ .+..+++-...+.|..+|..++
T Consensus       200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~---~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G  276 (349)
T 3v64_C          200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKA---VISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG  276 (349)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEE---EEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence            2334567788873  445444 456789999987543221   12122233445555 4444444456677888886666


Q ss_pred             eEEEEEc
Q psy9182         388 EFVRTLN  394 (486)
Q Consensus       388 ~~~~~~~  394 (486)
                      +....+.
T Consensus       277 ~~~~~i~  283 (349)
T 3v64_C          277 KNQEIIR  283 (349)
T ss_dssp             CSCEEEE
T ss_pred             CccEEec
Confidence            6555554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.80  E-value=0.023  Score=52.93  Aligned_cols=205  Identities=11%  Similarity=0.027  Sum_probs=115.1

Q ss_pred             EEEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcccE--EEEEec-CCEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         238 YCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSV--LCLQYD-ERVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       238 ~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v--~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +++.+.++.|+ +-...+.|..++.........+.......  .++.+. +.+.++-...+.|.+.++........+...
T Consensus       121 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~  200 (386)
T 3v65_B          121 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS  200 (386)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS
T ss_pred             EEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC
Confidence            44454445544 44567789999987665444443222223  344443 444455555678988888755433334333


Q ss_pred             CccEEEEEEcC--CeEEEEe-CC-CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCC
Q psy9182         314 CEAVLHLRFSN--GMMVTCS-KD-RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSS  386 (486)
Q Consensus       314 ~~~i~~~~~~~--~~l~~~~-~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~  386 (486)
                      ......+++++  +.|+... .+ +.|..+++.......   .....-.....+++  ++..|+.+ ...+.|..+|+..
T Consensus       201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG  277 (386)
T 3v65_B          201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG  277 (386)
T ss_dssp             CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred             CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence            45567788874  4555444 34 678888876543221   11122233455666  45555544 4567899999875


Q ss_pred             ceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         387 CEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       387 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      ......+.........++++ +.++++-...+.|..++..+|+.+..+.........|++
T Consensus       278 ~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          278 SHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             CSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             CeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence            43333333333344555554 455556666788999997777777666543333444444

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.79  E-value=0.019  Score=51.92  Aligned_cols=127  Identities=11%  Similarity=0.070  Sum_probs=72.8

Q ss_pred             CCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEE-eCCCcEEEEECCCCCc--eeeEEeeecCcccEEEEEe--
Q psy9182         293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTC-SKDRSIAVWDMVSPNE--ITLRRVLVGHRAAVNVVDF--  365 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~v~~~~~--  365 (486)
                      +|.|..+|..+++....... ......++++++  .++++ ..++.|..|++.....  .......   .. ...+.+  
T Consensus       164 ~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~  238 (322)
T 2fp8_A          164 TGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNA  238 (322)
T ss_dssp             CEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECT
T ss_pred             CceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECC
Confidence            36788888876654322211 223345777754  45555 5568999999875321  1111111   12 445565  


Q ss_pred             CCCEEEEEeC----------CCcEEEEECCCceEEEEEcCCc----ccEEEEEeC-CCEEEEEeCCCcEEEEECC
Q psy9182         366 DEKYIVSASG----------DRTIKVWNTSSCEFVRTLNGHK----RGIACLQYR-DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       366 ~~~~l~~~~~----------d~~i~iwd~~~~~~~~~~~~~~----~~v~~~~~~-~~~l~~~~~dg~v~iwd~~  425 (486)
                      +|++.++...          .+.|..+|.. ++.+..+....    ..++.+.+. +.+.++....+.|.++++.
T Consensus       239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~  312 (322)
T 2fp8_A          239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD  312 (322)
T ss_dssp             TSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred             CCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence            5676655544          4678889874 77777765432    334555554 4444444567888888876

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.79  E-value=0.0043  Score=55.66  Aligned_cols=187  Identities=11%  Similarity=0.144  Sum_probs=105.9

Q ss_pred             EeCCCEEEEEecC-----CeEEEEECCCceeeEEE--cCCcccEEEEEecCCEEEEEeCCC-----cEEEEECCCCcEEE
Q psy9182         241 QYDDHKIVSGLRD-----NTIKVWDRVSLQCIKVL--TGHTGSVLCLQYDERVIISGSSDS-----TVRVWDVNTGEMVN  308 (486)
Q Consensus       241 ~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~  308 (486)
                      ..++..++.|+.+     ..+.+||..+.+-...-  ........+...++..++.|+.++     .+.+||+.+.+...
T Consensus        59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  138 (302)
T 2xn4_A           59 YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH  138 (302)
T ss_dssp             EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred             EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence            3477777888755     35889998876533221  111122233445788888887653     47889988776443


Q ss_pred             Ee--cccCccEEEEEEcCCeEEEEeC-------CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC---
Q psy9182         309 TL--IHHCEAVLHLRFSNGMMVTCSK-------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD---  376 (486)
Q Consensus       309 ~~--~~~~~~i~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d---  376 (486)
                      .-  .........+.+.+..++.|+.       -..+.+||+.+..-.. ............++..++..++.|+.+   
T Consensus       139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~  217 (302)
T 2xn4_A          139 VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY-IAEMSTRRSGAGVGVLNNLLYAVGGHDGPL  217 (302)
T ss_dssp             ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBSSSS
T ss_pred             cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE-CCCCccccccccEEEECCEEEEECCCCCCc
Confidence            22  1111222333344445555543       2458899987754221 111222222334445577777777654   


Q ss_pred             --CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCCe
Q psy9182         377 --RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGA  428 (486)
Q Consensus       377 --~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~  428 (486)
                        ..+.+||+.+.+-...  +........++..++.+++.|+.++     .+.+||+.+.+
T Consensus       218 ~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          218 VRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             ccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence              4689999987654322  2222223345556788888887653     48899987654

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.77  E-value=0.0052  Score=56.70  Aligned_cols=227  Identities=10%  Similarity=0.051  Sum_probs=121.5

Q ss_pred             EeCCCEEEEEecC-CeEEEEECCC----ceeeEEEc-CCcccEEEEEecCCEEEEEeC-C---------CcEEEEECCCC
Q psy9182         241 QYDDHKIVSGLRD-NTIKVWDRVS----LQCIKVLT-GHTGSVLCLQYDERVIISGSS-D---------STVRVWDVNTG  304 (486)
Q Consensus       241 ~~~~~~l~~~~~d-g~i~i~d~~~----~~~~~~~~-~~~~~v~~~~~~~~~l~~~~~-d---------g~i~vwd~~~~  304 (486)
                      ..++..++.|+.+ ..+.+||..+    .+.+..+. .....-.+...++.+++.|+. +         ..+.+||..+.
T Consensus        17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            3477777777644 4788999864    22222222 111222334457777777776 2         46899999887


Q ss_pred             cEEEEec---ccCccEEEEEEcCCeEEEEeCC---------------------------------------CcEEEEECC
Q psy9182         305 EMVNTLI---HHCEAVLHLRFSNGMMVTCSKD---------------------------------------RSIAVWDMV  342 (486)
Q Consensus       305 ~~~~~~~---~~~~~i~~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~~  342 (486)
                      +-...-.   .......++...+..++.|+.+                                       ..+.+||..
T Consensus        97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~  176 (357)
T 2uvk_A           97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS  176 (357)
T ss_dssp             EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred             cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence            6433221   1112223344455566777654                                       578999987


Q ss_pred             CCCceeeEEeeec-CcccEEEEEeCCCEEEEEeC------CCcEEEEEC--CCceEE--EEEcCCc--ccEEEEEeCCCE
Q psy9182         343 SPNEITLRRVLVG-HRAAVNVVDFDEKYIVSASG------DRTIKVWNT--SSCEFV--RTLNGHK--RGIACLQYRDRL  409 (486)
Q Consensus       343 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~------d~~i~iwd~--~~~~~~--~~~~~~~--~~v~~~~~~~~~  409 (486)
                      +.+-... ..... ......++..+++.++.|+.      ...+..||+  .+.+-.  ..+....  ....++..++.+
T Consensus       177 ~~~W~~~-~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i  255 (357)
T 2uvk_A          177 TQQWSYA-GESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL  255 (357)
T ss_dssp             TTEEEEE-EECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred             CCcEEEC-CCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence            7643222 22221 11213344447777776653      345777876  443322  1221111  123455667888


Q ss_pred             EEEEeCC----------------------CcEEEEECCCC--eeeEEecCcccCeEEEEecCCEEEEEeCCC------cE
Q psy9182         410 VVSGSSD----------------------NTIRLWDIECG--ACLRVLEGHEELVRCIRFDAKRIVSGAYDG------KI  459 (486)
Q Consensus       410 l~~~~~d----------------------g~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg------~v  459 (486)
                      ++.|+.+                      ..+.+||+.+.  +.+..+......-.++.++++.++.||.++      .|
T Consensus       256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v  335 (357)
T 2uvk_A          256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDS  335 (357)
T ss_dssp             EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEE
T ss_pred             EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeE
Confidence            7877732                      25788998754  344444433333445566888888888653      35


Q ss_pred             EEEeCCCCC
Q psy9182         460 KVWNLVAAL  468 (486)
Q Consensus       460 ~iwdl~~~~  468 (486)
                      .++++++++
T Consensus       336 ~~l~~~~~~  344 (357)
T 2uvk_A          336 VLITVKDNK  344 (357)
T ss_dssp             EEEEC-CCS
T ss_pred             EEEEEcCcE
Confidence            556877654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.75  E-value=0.0065  Score=54.64  Aligned_cols=188  Identities=12%  Similarity=0.118  Sum_probs=108.3

Q ss_pred             EEeCCCEEEEEecC----CeEEEEECCCceeeEEE--cCCcccEEEEEecCCEEEEEeCC------CcEEEEECCCCcEE
Q psy9182         240 LQYDDHKIVSGLRD----NTIKVWDRVSLQCIKVL--TGHTGSVLCLQYDERVIISGSSD------STVRVWDVNTGEMV  307 (486)
Q Consensus       240 ~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~  307 (486)
                      ...++..++.|+.+    ..+.+||..+.+-...-  ........+...++.+++.|+.+      ..+.+||..+.+..
T Consensus        52 ~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~  131 (306)
T 3ii7_A           52 VFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH  131 (306)
T ss_dssp             EEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred             EEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence            34577778888755    67899998886543322  21122223344577888888765      46899999887643


Q ss_pred             EEe--cccCccEEEEEEcCCeEEEEeC---------CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC
Q psy9182         308 NTL--IHHCEAVLHLRFSNGMMVTCSK---------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD  376 (486)
Q Consensus       308 ~~~--~~~~~~i~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d  376 (486)
                      ..-  .........+...+..++.|+.         -..+.+||+.+..-.. ............++..+++.++.|+.+
T Consensus       132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~  210 (306)
T 3ii7_A          132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTE-LCPMIEARKNHGLVFVKDKIFAVGGQN  210 (306)
T ss_dssp             EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred             eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEE-CCCccchhhcceEEEECCEEEEEeCCC
Confidence            321  1111222233344445555543         3558899988764221 111222222333444577777777643


Q ss_pred             -----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCe
Q psy9182         377 -----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGA  428 (486)
Q Consensus       377 -----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~  428 (486)
                           ..+.+||+.+.+-..  .+........++..++.+++.|+.+     ..+.+||+.+.+
T Consensus       211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          211 GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             CCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence                 468899988764322  2222233345556688888888854     568899987753

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.68  E-value=0.0026  Score=57.35  Aligned_cols=227  Identities=10%  Similarity=0.117  Sum_probs=125.4

Q ss_pred             EEeCCCEEEEEecC----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeC----C-----CcEEEEECCCC
Q psy9182         240 LQYDDHKIVSGLRD----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSS----D-----STVRVWDVNTG  304 (486)
Q Consensus       240 ~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~----d-----g~i~vwd~~~~  304 (486)
                      ...++..++.|+.+    ..+.+||..+.+-...  +......-..+..++.+++.|+.    +     ..+.+||..+.
T Consensus        21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~  100 (308)
T 1zgk_A           21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN  100 (308)
T ss_dssp             CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred             cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence            34466777777742    3688999887653322  11111112233447777777765    2     46889999877


Q ss_pred             cEEEEe--cccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182         305 EMVNTL--IHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-  376 (486)
Q Consensus       305 ~~~~~~--~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-  376 (486)
                      +....-  .........+.+.+..++.|+.+     ..+.+||+.+.+-... ...........++..++..++.|+.+ 
T Consensus       101 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~  179 (308)
T 1zgk_A          101 QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV-APMLTRRIGVGVAVLNRLLYAVGGFDG  179 (308)
T ss_dssp             EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred             eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeEC-CCCCccccceEEEEECCEEEEEeCCCC
Confidence            543321  11112223333444455555533     4688899876542211 11222222333444577777777654 


Q ss_pred             ----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeE--EecCcccCeEEE
Q psy9182         377 ----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLR--VLEGHEELVRCI  443 (486)
Q Consensus       377 ----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~--~~~~h~~~v~~~  443 (486)
                          ..+.+||+.+.+-..  .+........++..++.+++.|+.+     ..+.+||+.+.+-..  .+.........+
T Consensus       180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~  259 (308)
T 1zgk_A          180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGIT  259 (308)
T ss_dssp             SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred             CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEE
Confidence                458899988765332  1222222334555678888888764     569999998764322  122122223344


Q ss_pred             EecCCEEEEEeCC-----CcEEEEeCCCC
Q psy9182         444 RFDAKRIVSGAYD-----GKIKVWNLVAA  467 (486)
Q Consensus       444 ~~~~~~l~s~~~d-----g~v~iwdl~~~  467 (486)
                      ..+++.++.|+.+     ..+.+||+.+.
T Consensus       260 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          260 VHQGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             EETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             EECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence            4577888888754     35788888764

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.67  E-value=0.0087  Score=54.07  Aligned_cols=218  Identities=11%  Similarity=0.092  Sum_probs=119.5

Q ss_pred             EEEEecCCeEEEEECCCceeeE-EEcC--CcccEEEEEecCCEEEEEeC-----C------CcEEEEECCCCcEEEEe--
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIK-VLTG--HTGSVLCLQYDERVIISGSS-----D------STVRVWDVNTGEMVNTL--  310 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~-~~~~--~~~~v~~~~~~~~~l~~~~~-----d------g~i~vwd~~~~~~~~~~--  310 (486)
                      ++.|+  ..+.+||..+++-.. .+..  ......++..++..++.|+.     .      ..+.+||..+++-...-  
T Consensus         8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~   85 (315)
T 4asc_A            8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL   85 (315)
T ss_dssp             EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred             EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence            44454  579999998876432 1111  11112233347888888873     1      12778998877643211  


Q ss_pred             cccCccEEEEEEcCCeEEEEeCC--------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC------C
Q psy9182         311 IHHCEAVLHLRFSNGMMVTCSKD--------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG------D  376 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------d  376 (486)
                      .........+...+..++.|+.+        ..+.+||..+.+-. .............++..+++.++.|+.      -
T Consensus        86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  164 (315)
T 4asc_A           86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCL  164 (315)
T ss_dssp             SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBC
T ss_pred             CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCCcccceeEEEECCEEEEEeCCCCCCccc
Confidence            11111112233344455566532        45889998775321 111122222333344567777777765      2


Q ss_pred             CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCCeeeEE--ecCcccCeEEEEecC
Q psy9182         377 RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGACLRV--LEGHEELVRCIRFDA  447 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~~  447 (486)
                      ..+.+||..+.+-..  .+......-.+...++++++.|+.++     .+.+||+.+.+=...  +.........+.+++
T Consensus       165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  244 (315)
T 4asc_A          165 NKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVG  244 (315)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred             ceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECC
Confidence            468999988764322  22222223345566788888887654     588999987643222  222222334455588


Q ss_pred             CEEEEEeCCC--------------cEEEEeCCCC
Q psy9182         448 KRIVSGAYDG--------------KIKVWNLVAA  467 (486)
Q Consensus       448 ~~l~s~~~dg--------------~v~iwdl~~~  467 (486)
                      ..++.|+.++              .+.+||+.+.
T Consensus       245 ~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  278 (315)
T 4asc_A          245 TLYAIGGFATLETESGELVPTELNDIWRYNEEEK  278 (315)
T ss_dssp             EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred             EEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence            8888887642              3678888764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.64  E-value=0.037  Score=50.74  Aligned_cols=216  Identities=12%  Similarity=0.048  Sum_probs=120.1

Q ss_pred             EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEE-EEeCCCcEEEEECCCCcEEEEecccCccEEEEEE
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF  322 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~  322 (486)
                      .|+.+ ....|+..++........+.. ......++|+  +..|+ +-...+.|..+++........+.........+++
T Consensus        46 ~ll~~-~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav  123 (349)
T 3v64_C           46 VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV  123 (349)
T ss_dssp             EEEEE-CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEE
T ss_pred             eeEee-cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEE
Confidence            34433 345688888776655444443 3346778774  34444 4445788999998866544433332233445555


Q ss_pred             c--CCeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeC--CCEEEEEe-CC-CcEEEEECCCceEEEEE-c
Q psy9182         323 S--NGMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD--EKYIVSAS-GD-RTIKVWNTSSCEFVRTL-N  394 (486)
Q Consensus       323 ~--~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~d-~~i~iwd~~~~~~~~~~-~  394 (486)
                      +  .+.+ ++-...+.|.+.++.......   .....-.....++++  +..|+.+. .. +.|..+++.... ...+ .
T Consensus       124 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~---l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~  199 (349)
T 3v64_C          124 DWVHDKLYWTDSGTSRIEVANLDGAHRKV---LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIAD  199 (349)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSCSCEE---EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCC
T ss_pred             ecCCCeEEEEcCCCCeEEEEcCCCCceEE---EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEE
Confidence            4  4444 455567889999987543221   122222334555553  45554443 44 778888876433 2232 2


Q ss_pred             CCcccEEEEEeC--CCEE-EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCCC
Q psy9182         395 GHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       395 ~~~~~v~~~~~~--~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~  467 (486)
                      ........++++  +..| ++-...+.|..+|+........+.........|++++.. +++-...+.|...+-.++
T Consensus       200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G  276 (349)
T 3v64_C          200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG  276 (349)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence            223345666664  4444 444556789999987443333333334456677774444 444445677877774333

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.51  E-value=0.0043  Score=63.55  Aligned_cols=104  Identities=8%  Similarity=0.046  Sum_probs=57.9

Q ss_pred             EEEEeCCCEEEEEec---CCeEEEEECCCc--ee-eEEE-cCCcccEEEEEe-cCCEEEEEeC-C----CcEEEEECCCC
Q psy9182         238 YCLQYDDHKIVSGLR---DNTIKVWDRVSL--QC-IKVL-TGHTGSVLCLQY-DERVIISGSS-D----STVRVWDVNTG  304 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~-~~~~-~~~~~~v~~~~~-~~~~l~~~~~-d----g~i~vwd~~~~  304 (486)
                      ..+++|+++|+....   ...|.++|+.++  +. +..+ ........++.| +++.|+..+. +    ..|..+|+.++
T Consensus       276 ~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~  355 (751)
T 2xe4_A          276 MYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP  355 (751)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST
T ss_pred             EEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc
Confidence            457889998887653   346888898775  23 1333 334445566663 4665554443 2    36777787653


Q ss_pred             -cEEE-EecccC-ccEEEEEEcCCe-EEEEeCCCc--EEEEEC
Q psy9182         305 -EMVN-TLIHHC-EAVLHLRFSNGM-MVTCSKDRS--IAVWDM  341 (486)
Q Consensus       305 -~~~~-~~~~~~-~~i~~~~~~~~~-l~~~~~dg~--i~i~d~  341 (486)
                       +... .+.... ..+..+.+.++. +++...++.  |.++|+
T Consensus       356 ~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          356 SDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             TCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred             ccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence             2211 222222 245666776664 455556665  555665

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.44  E-value=0.062  Score=48.47  Aligned_cols=177  Identities=11%  Similarity=0.193  Sum_probs=107.0

Q ss_pred             CCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC---------eEEEEeC---CCcEEEEECC--CCCceee
Q psy9182         284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---------MMVTCSK---DRSIAVWDMV--SPNEITL  349 (486)
Q Consensus       284 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---------~l~~~~~---dg~i~i~d~~--~~~~~~~  349 (486)
                      ...++.....+-+.+||+ +|+.+..+..  ..+..+..-++         .+++...   ++.|.+|++.  ++. +..
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~  115 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS  115 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence            345666666778999999 7888887753  34444444333         2333333   5789999773  332 211


Q ss_pred             EEe----eecCcccEEEEEe-----CCC-EEEEEeCCCcEEEEEC-------CCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182         350 RRV----LVGHRAAVNVVDF-----DEK-YIVSASGDRTIKVWNT-------SSCEFVRTLNGHKRGIACLQYR--DRLV  410 (486)
Q Consensus       350 ~~~----~~~~~~~v~~~~~-----~~~-~l~~~~~d~~i~iwd~-------~~~~~~~~~~~~~~~v~~~~~~--~~~l  410 (486)
                      ...    .......+..++.     .+. ++++...+|.+..|++       .+.+.++++.... .+-.+..+  ...|
T Consensus       116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-q~EgcvvDd~~g~L  194 (355)
T 3amr_A          116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS-QTEGMAADDEYGRL  194 (355)
T ss_dssp             CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS-CEEEEEEETTTTEE
T ss_pred             ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC-CcceEEEcCCCCeE
Confidence            110    0011022332333     343 6888888999999988       2346677777544 34444443  6789


Q ss_pred             EEEeCCCcEEEEECC-----CCeeeEEec-Cc-ccCeEEEEe----cCC-EEEEEe-CCCcEEEEeCC
Q psy9182         411 VSGSSDNTIRLWDIE-----CGACLRVLE-GH-EELVRCIRF----DAK-RIVSGA-YDGKIKVWNLV  465 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~-----~~~~~~~~~-~h-~~~v~~~~~----~~~-~l~s~~-~dg~v~iwdl~  465 (486)
                      +.+-++.-|..++.+     +++.+..+. ++ ...+..|+.    +++ +|++++ .++++.+||..
T Consensus       195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            999998777777754     355665553 22 235777777    444 666666 57799999986

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.42  E-value=0.038  Score=49.82  Aligned_cols=219  Identities=11%  Similarity=0.142  Sum_probs=116.9

Q ss_pred             EEEEEecCCeEEEEECCCceeeE-EEcC--CcccEEEEEecCCEEEEEeC----CC-------cEEEEECCCCcEEEE--
Q psy9182         246 KIVSGLRDNTIKVWDRVSLQCIK-VLTG--HTGSVLCLQYDERVIISGSS----DS-------TVRVWDVNTGEMVNT--  309 (486)
Q Consensus       246 ~l~~~~~dg~i~i~d~~~~~~~~-~~~~--~~~~v~~~~~~~~~l~~~~~----dg-------~i~vwd~~~~~~~~~--  309 (486)
                      .++.|+.  .+.+||..+.+-.. .+..  ......++..++..++.|+.    ++       .+..||..+++....  
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~   95 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP   95 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred             hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence            3444543  48899988876443 1111  11112223347788888873    12       177889887754332  


Q ss_pred             ecccCccEEEEEEcCCeEEEEeCC-------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC------C
Q psy9182         310 LIHHCEAVLHLRFSNGMMVTCSKD-------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG------D  376 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------d  376 (486)
                      +.............+..++.|+.+       ..+.+||+.+.+-.. ............++..++..++.|+.      -
T Consensus        96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  174 (318)
T 2woz_A           96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCT  174 (318)
T ss_dssp             BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEEETTEEEEECCEESSSCBC
T ss_pred             CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEEECCEEEEEcCCCCCCCcc
Confidence            111111223333445566666653       357888887654221 11111112222333457777777653      2


Q ss_pred             CcEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCee--eEEecCcccCeEEEEecC
Q psy9182         377 RTIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGAC--LRVLEGHEELVRCIRFDA  447 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~  447 (486)
                      ..+.+||+.+.+-...  +........+...++.+++.|+.+     ..+.+||+.+.+=  +..+.........+.+++
T Consensus       175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~  254 (318)
T 2woz_A          175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAG  254 (318)
T ss_dssp             CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETT
T ss_pred             ceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECC
Confidence            4589999988653322  222222234555678888888754     3577899876542  222222222334455588


Q ss_pred             CEEEEEeCC--------------CcEEEEeCCCC
Q psy9182         448 KRIVSGAYD--------------GKIKVWNLVAA  467 (486)
Q Consensus       448 ~~l~s~~~d--------------g~v~iwdl~~~  467 (486)
                      ..++.||.+              ..+.+||+.+.
T Consensus       255 ~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  288 (318)
T 2woz_A          255 SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK  288 (318)
T ss_dssp             EEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred             EEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence            888887754              35788888764

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.41  E-value=0.079  Score=48.97  Aligned_cols=222  Identities=12%  Similarity=0.146  Sum_probs=145.4

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCC-CcEEEEeccc---
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNT-GEMVNTLIHH---  313 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~---  313 (486)
                      -++|..+.+|.-. ...+.|+|+++.+.++.+.-. ..|.-..| +.+.|+..+. ..|+-|++.. ..+.+.+..|   
T Consensus        72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L  148 (494)
T 1bpo_A           72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSL  148 (494)
T ss_dssp             EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTEEEEECS-SEEEEEESSSSCCCEEEEECCGGG
T ss_pred             eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCeEEEEcC-CeeEEecccCCCCchhheecchhc
Confidence            3566666666554 679999999999999888743 46767777 7787777764 5799999964 3455555433   


Q ss_pred             -CccEEEEEEcCC---eEEEEe------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC-----EEEEEeCC--
Q psy9182         314 -CEAVLHLRFSNG---MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-----YIVSASGD--  376 (486)
Q Consensus       314 -~~~i~~~~~~~~---~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~~~~~d--  376 (486)
                       ...|..-..+++   .+++|-      -.|.+.+|..+.+.    .+.+.+|......+..+|+     .++.+...  
T Consensus       149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~  224 (494)
T 1bpo_A          149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA  224 (494)
T ss_dssp             TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred             ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----cchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence             234555555543   333332      24678899887653    2667788887777777543     34444332  


Q ss_pred             -CcEEEEECCCc--------eEEEEEc----CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         377 -RTIKVWNTSSC--------EFVRTLN----GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       377 -~~i~iwd~~~~--------~~~~~~~----~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                       +.+++-++...        +....+.    ....--.++..+  -..+..-+.-|.|++||+.++.++..-+-..+.|.
T Consensus       225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF  304 (494)
T 1bpo_A          225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF  304 (494)
T ss_dssp             CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceE
Confidence             78888887542        1111111    111222344443  45688888999999999999999988877777776


Q ss_pred             EEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         442 CIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       442 ~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      .-+.  +..-++.....|.|.--.++..
T Consensus       305 ~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~  332 (494)
T 1bpo_A          305 VTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (494)
T ss_dssp             EEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred             EecccCCCCcEEEEccCceEEEEEEccc
Confidence            6655  4556777778898877666643

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.37  E-value=0.073  Score=47.67  Aligned_cols=218  Identities=13%  Similarity=0.013  Sum_probs=120.3

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC--CcEEEEECCCCcEEEEecc
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD--STVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~  312 (486)
                      -.++.++++++++-..++.|..||.... ....+. .......+++  +++++++....  ..|..+|..+++.......
T Consensus        36 gia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~  113 (306)
T 2p4o_A           36 NLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL  113 (306)
T ss_dssp             EEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             eEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence            3456667886666667899999997654 333333 2345677777  56755544332  2477778777775433221


Q ss_pred             -cCccEEEEE-EcCCeEEEEe-CCCcEEEEECCCCCc-eeeEE------eeecCcccEEEEEeCCCEEEEEe-CCCcEEE
Q psy9182         313 -HCEAVLHLR-FSNGMMVTCS-KDRSIAVWDMVSPNE-ITLRR------VLVGHRAAVNVVDFDEKYIVSAS-GDRTIKV  381 (486)
Q Consensus       313 -~~~~i~~~~-~~~~~l~~~~-~dg~i~i~d~~~~~~-~~~~~------~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~i  381 (486)
                       .......++ +.++.+++.. .++.|..+|...+.. .....      .....-.....+..++++|+.+. ..+.|..
T Consensus       114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~  193 (306)
T 2p4o_A          114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLR  193 (306)
T ss_dssp             TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred             CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEE
Confidence             112223333 2344455444 588899999765321 10000      00011123344567777665554 5678999


Q ss_pred             EECCC-ceE--EEEEc-CCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeE--EecCcccCeEEEEec-----CCEE
Q psy9182         382 WNTSS-CEF--VRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR--VLEGHEELVRCIRFD-----AKRI  450 (486)
Q Consensus       382 wd~~~-~~~--~~~~~-~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~h~~~v~~~~~~-----~~~l  450 (486)
                      +|+.. ++.  ...+. .....=.++..+|++.++....+.|.++|.. |+...  .+.......++++|.     ++.|
T Consensus       194 ~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~L  272 (306)
T 2p4o_A          194 IPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAI  272 (306)
T ss_dssp             EEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEE
T ss_pred             EEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEE
Confidence            99874 321  11111 1111112334457777776778899999976 66533  233333568899984     3566


Q ss_pred             EEEeCCC
Q psy9182         451 VSGAYDG  457 (486)
Q Consensus       451 ~s~~~dg  457 (486)
                      +.++..+
T Consensus       273 yVt~~~~  279 (306)
T 2p4o_A          273 YVVTNGG  279 (306)
T ss_dssp             EEEECTT
T ss_pred             EEECCCC
Confidence            6665443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.37  E-value=0.019  Score=51.60  Aligned_cols=187  Identities=11%  Similarity=0.112  Sum_probs=104.2

Q ss_pred             EeCCCEEEEEec----C-----CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-----CcEEEEECCCC
Q psy9182         241 QYDDHKIVSGLR----D-----NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-----STVRVWDVNTG  304 (486)
Q Consensus       241 ~~~~~~l~~~~~----d-----g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~  304 (486)
                      ..++..++.|+.    +     ..+.+||..+.+-...  +........+...+++.++.|+.+     ..+.+||..+.
T Consensus        68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~  147 (308)
T 1zgk_A           68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD  147 (308)
T ss_dssp             EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTT
T ss_pred             EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCC
Confidence            346777777765    2     4688899877653322  111112223344577777777643     35889999877


Q ss_pred             cEEEEe--cccCccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-
Q psy9182         305 EMVNTL--IHHCEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-  376 (486)
Q Consensus       305 ~~~~~~--~~~~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-  376 (486)
                      +....-  .........+.+.+..++.|+.+     ..+.+||+.+.+-.. ............++..++..++.|+.+ 
T Consensus       148 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~  226 (308)
T 1zgk_A          148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM-ITAMNTIRSGAGVCVLHNCIYAAGGYDG  226 (308)
T ss_dssp             EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred             eEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEee-CCCCCCccccceEEEECCEEEEEeCCCC
Confidence            543321  11112223333444456666543     468899987653221 111222222333444577777777654 


Q ss_pred             ----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCe
Q psy9182         377 ----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGA  428 (486)
Q Consensus       377 ----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~  428 (486)
                          ..+.+||+.+.+-..  .+........++..++++++.|+.+     ..+.+||+.+.+
T Consensus       227 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          227 QDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence                569999998765332  2222222334555677888887754     457888887654

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=97.33  E-value=0.039  Score=48.78  Aligned_cols=222  Identities=11%  Similarity=0.064  Sum_probs=125.0

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA  316 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  316 (486)
                      +..++......+.-. ||.|+.|-....-.+..-......|..++......+.-. ||.|+.|-....-.+..-..-...
T Consensus        26 i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~  103 (282)
T 3qhy_B           26 VDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEARSG  103 (282)
T ss_dssp             CCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGSSS
T ss_pred             CcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCcccCCC
Confidence            334444444444445 899999965432111111112235777777444444445 899999976532111111111346


Q ss_pred             EEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       317 i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      |..++......++-. +|.|+.|-......+.   ........|..++....+.+.-. ||.|+.|-....-.+..-...
T Consensus       104 v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~  178 (282)
T 3qhy_B          104 VDAIAAGAWASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEA  178 (282)
T ss_dssp             EEEEEEETTEEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGG
T ss_pred             eEEEECcCCEEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceec
Confidence            888888877766677 9999999765433221   11122345777777555544455 799999976542211111112


Q ss_pred             cccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       397 ~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ...|..++......+.- .||.|+.|=....-.+..-......|..|+. ....++..  ||.|..|--....
T Consensus       179 ~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~g  248 (282)
T 3qhy_B          179 QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRTA  248 (282)
T ss_dssp             GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCCC
T ss_pred             CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCCc
Confidence            34677777765554444 6999999976543222111112346778888 44444444  9999999866543

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.31  E-value=0.00076  Score=61.01  Aligned_cols=184  Identities=9%  Similarity=0.024  Sum_probs=106.8

Q ss_pred             CEEEEEecCCeEEEEECCCceeeEEEcCC-cccEEEEEe----cCCEEEEE--eCCCcEEEEECCCCcEEEEeccc----
Q psy9182         245 HKIVSGLRDNTIKVWDRVSLQCIKVLTGH-TGSVLCLQY----DERVIISG--SSDSTVRVWDVNTGEMVNTLIHH----  313 (486)
Q Consensus       245 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~----~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~----  313 (486)
                      ..+++++.||.|.-+|..+|+....++.. ..++....-    .+..++.+  +.||.|..+|..+|.....+...    
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~   90 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS   90 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence            46889999999999999999999998754 123332221    12244444  68999999999988665544321    


Q ss_pred             CccEEE---EEE-------cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCc----ccEEEEE-------eCCCEEEE
Q psy9182         314 CEAVLH---LRF-------SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR----AAVNVVD-------FDEKYIVS  372 (486)
Q Consensus       314 ~~~i~~---~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----~~v~~~~-------~~~~~l~~  372 (486)
                      ..++..   ...       .++.+++|+.+|.+...|+.+++.+.....-....    ....|..       ..+..++.
T Consensus        91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i  170 (339)
T 2be1_A           91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI  170 (339)
T ss_dssp             TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred             ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence            122221   011       46688999999999999999998764332211000    0001111       12456777


Q ss_pred             EeCCCcEEEEECCCceEEEEE-----cCCccc--E---EEEEeCCCEEEEEeCCCcEEEEECCCCeeeE
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTL-----NGHKRG--I---ACLQYRDRLVVSGSSDNTIRLWDIECGACLR  431 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~-----~~~~~~--v---~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~  431 (486)
                      +..+..+.+.+ ++|+ +..+     ......  +   ..+..++.+ +.++.||.|.-+|..+|+.+.
T Consensus       171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred             ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence            77666666666 3443 2111     111000  0   000112444 457889999999988888776

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.21  E-value=0.33  Score=51.95  Aligned_cols=127  Identities=10%  Similarity=0.143  Sum_probs=73.4

Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEE---e-C--CCEEEEEe----------CCCcEEEEECCCceEEEEEc-CCc
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVD---F-D--EKYIVSAS----------GDRTIKVWNTSSCEFVRTLN-GHK  397 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~---~-~--~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~-~~~  397 (486)
                      .|++.|..+.+..... .+ .....+.++.   + +  ..++++|+          ..|.|++|++..+++....+ ...
T Consensus       808 ~i~lidp~t~~~i~~~-~l-~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~  885 (1158)
T 3ei3_A          808 NLLIIDQHTFEVLHAH-QF-LQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK  885 (1158)
T ss_dssp             EEEEEETTTCCEEEEE-EC-CTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred             EEEEEeCCCCeEEEEE-eC-CCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence            3566666555433211 11 2223344443   3 2  46888886          35789999987544322221 235


Q ss_pred             ccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEE-ecCccc-CeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182         398 RGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEE-LVRCIRFDAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       398 ~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~-~~~h~~-~v~~~~~~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +.++++.. +| +|++|- ...|++|++...+.+.. ...+.. .+..+...+++++.|..-..|.+...+
T Consensus       886 g~v~al~~~~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~  954 (1158)
T 3ei3_A          886 GAVYSMVEFNG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYK  954 (1158)
T ss_dssp             SCEEEEEEETT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred             CcCEEEeeeCC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence            67888875 56 444443 47899999986654441 111211 133565678999999887778776544

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.18  E-value=0.12  Score=46.24  Aligned_cols=177  Identities=6%  Similarity=-0.050  Sum_probs=92.6

Q ss_pred             EEEEeCCCEEEEEecC--CeEEEEECCCceeeEEEcC-CcccEEEEE-ecCCEEEEEe-CCCcEEEEECCCCcE-EEEec
Q psy9182         238 YCLQYDDHKIVSGLRD--NTIKVWDRVSLQCIKVLTG-HTGSVLCLQ-YDERVIISGS-SDSTVRVWDVNTGEM-VNTLI  311 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~-~~~~v~~~~-~~~~~l~~~~-~dg~i~vwd~~~~~~-~~~~~  311 (486)
                      +++.++++++++....  ..|..+|..+++....... .......+. +.+..++.+. .++.|..+|..+++. +....
T Consensus        77 ia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~  156 (306)
T 2p4o_A           77 LAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH  156 (306)
T ss_dssp             EEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             EEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence            4556677765554332  2477778777765433321 111223333 3444444444 588999999876532 21111


Q ss_pred             ---------ccCccEEEEEEcCCeEEE-EeCCCcEEEEECCC-CCceeeEEee-ecCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182         312 ---------HHCEAVLHLRFSNGMMVT-CSKDRSIAVWDMVS-PNEITLRRVL-VGHRAAVNVVDFDEKYIVSASGDRTI  379 (486)
Q Consensus       312 ---------~~~~~i~~~~~~~~~l~~-~~~dg~i~i~d~~~-~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~d~~i  379 (486)
                               ........+...++.+++ -...+.|..||+.. +... ....+ ......-.++..+|++.++....+.|
T Consensus       157 ~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~-~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V  235 (306)
T 2p4o_A          157 PMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPG-EPEIFVEQTNIDDFAFDVEGNLYGATHIYNSV  235 (306)
T ss_dssp             GGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBC-CCEEEEESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred             CccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCC-ccEEEeccCCCCCeEECCCCCEEEEeCCCCeE
Confidence                     111233445555555544 45678899999875 2211 11111 11111112334478777776677899


Q ss_pred             EEEECCCceEEE--EEcCCcccEEEEEeC-----CCEEEEEeCC
Q psy9182         380 KVWNTSSCEFVR--TLNGHKRGIACLQYR-----DRLVVSGSSD  416 (486)
Q Consensus       380 ~iwd~~~~~~~~--~~~~~~~~v~~~~~~-----~~~l~~~~~d  416 (486)
                      .++|.. ++...  .+.......+++++.     ++.|+.++..
T Consensus       236 ~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          236 VRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             EEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             EEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence            999975 65532  333333456777774     3555555543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.16  E-value=0.13  Score=46.32  Aligned_cols=227  Identities=12%  Similarity=-0.003  Sum_probs=119.9

Q ss_pred             ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCC
Q psy9182         126 RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGG  205 (486)
Q Consensus       126 g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~  205 (486)
                      ..|+..|+.+.+....+.. ......++|++              .++..+++-..++.|..+++.....          
T Consensus        10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~--------------~~~~ly~~D~~~~~I~~~~~~g~~~----------   64 (316)
T 1ijq_A           10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEV--------------ASNRIYWSDLSQRMICSTQLDRAHG----------   64 (316)
T ss_dssp             SSEEEEETTSCCCEEEECS-CSSEEEEEEET--------------TTTEEEEEETTTTEEEEEEC---------------
T ss_pred             CeEEEEECCCcceEehhcC-CCceEEEEEEe--------------CCCEEEEEECCCCcEEEEECCCCCC----------
Confidence            4688888887765554443 33556777762              1223344444566777777543100          


Q ss_pred             CCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec-
Q psy9182         206 PPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD-  283 (486)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~-  283 (486)
                                    +......+. .......-+++.+.+..| ++-...+.|.+++.........+.........++.+ 
T Consensus        65 --------------~~~~~~~~~-~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp  129 (316)
T 1ijq_A           65 --------------VSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDP  129 (316)
T ss_dssp             -----------------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEET
T ss_pred             --------------CcccEEEEe-CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCC
Confidence                          000000010 011122345566545444 454567899999987544333333333445666663 


Q ss_pred             -CCEEEEEeCC--CcEEEEECCCCcEEEEe-cccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecC
Q psy9182         284 -ERVIISGSSD--STVRVWDVNTGEMVNTL-IHHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGH  356 (486)
Q Consensus       284 -~~~l~~~~~d--g~i~vwd~~~~~~~~~~-~~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~  356 (486)
                       +..++.+...  +.|...++.. .....+ ...-.....+++++  +.|+.+ ...+.|..+|+...... ........
T Consensus       130 ~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~-~~~~~~~~  207 (316)
T 1ijq_A          130 VHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKR  207 (316)
T ss_dssp             TTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECTTT
T ss_pred             CCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceE-EEeecCCc
Confidence             4555554432  6888888753 333333 22334567788873  455544 45678999998753322 11111111


Q ss_pred             cccEEEEEeCCCE-EEEEeCCCcEEEEECCCceEEEEEc
Q psy9182         357 RAAVNVVDFDEKY-IVSASGDRTIKVWNTSSCEFVRTLN  394 (486)
Q Consensus       357 ~~~v~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~  394 (486)
                      ......+++++.. +++-...+.|..+|..+++.+..+.
T Consensus       208 ~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          208 LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             TSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             cCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence            2334455654444 4444566789999987777665554

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.14  E-value=0.074  Score=48.81  Aligned_cols=191  Identities=9%  Similarity=0.026  Sum_probs=101.7

Q ss_pred             EeCCCEEEEEec-C---------CeEEEEECCCceeeEE--Ec-CCcccEEEEEecCCEEEEEeCC--------------
Q psy9182         241 QYDDHKIVSGLR-D---------NTIKVWDRVSLQCIKV--LT-GHTGSVLCLQYDERVIISGSSD--------------  293 (486)
Q Consensus       241 ~~~~~~l~~~~~-d---------g~i~i~d~~~~~~~~~--~~-~~~~~v~~~~~~~~~l~~~~~d--------------  293 (486)
                      ..++..++.|+. +         ..+.+||..+.+-...  +. .......++..++++++.|+.+              
T Consensus        63 ~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~  142 (357)
T 2uvk_A           63 FIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEA  142 (357)
T ss_dssp             EETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhc
Confidence            346777777776 2         4688999887653221  11 1112223444688888888764              


Q ss_pred             -------------------------CcEEEEECCCCcEEEE--ecccCcc-EEEEEEcCCeEEEEeC------CCcEEEE
Q psy9182         294 -------------------------STVRVWDVNTGEMVNT--LIHHCEA-VLHLRFSNGMMVTCSK------DRSIAVW  339 (486)
Q Consensus       294 -------------------------g~i~vwd~~~~~~~~~--~~~~~~~-i~~~~~~~~~l~~~~~------dg~i~i~  339 (486)
                                               ..+.+||..+.+-...  +...... ...+...+..++.|+.      ...+..|
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~  222 (357)
T 2uvk_A          143 GKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFEL  222 (357)
T ss_dssp             TTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEE
T ss_pred             CCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEE
Confidence                                     4789999987754332  2211111 2233333445555543      3457778


Q ss_pred             EC--CCCCceeeEEeeecC--cccEEEEEeCCCEEEEEeCC----------------------CcEEEEECCCce--EEE
Q psy9182         340 DM--VSPNEITLRRVLVGH--RAAVNVVDFDEKYIVSASGD----------------------RTIKVWNTSSCE--FVR  391 (486)
Q Consensus       340 d~--~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~~~d----------------------~~i~iwd~~~~~--~~~  391 (486)
                      |+  .+.. ..........  .....++..++..++.|+.+                      ..+.+||+.+.+  .+.
T Consensus       223 d~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~  301 (357)
T 2uvk_A          223 DFTGNNLK-WNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG  301 (357)
T ss_dssp             ECC---CE-EEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred             EecCCCCc-EEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence            87  3321 1111111111  11223455577777777632                      257789987643  344


Q ss_pred             EEcCCcccEEEEEeCCCEEEEEeCCC------cEEEEECCCCeeeEE
Q psy9182         392 TLNGHKRGIACLQYRDRLVVSGSSDN------TIRLWDIECGACLRV  432 (486)
Q Consensus       392 ~~~~~~~~v~~~~~~~~~l~~~~~dg------~v~iwd~~~~~~~~~  432 (486)
                      .+......-.++..++++++.|+.++      .|.++++++++.+..
T Consensus       302 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~  348 (357)
T 2uvk_A          302 ELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ  348 (357)
T ss_dssp             ECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred             CCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence            44433333455667888888888653      356668877766544

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.12  E-value=0.14  Score=46.06  Aligned_cols=209  Identities=10%  Similarity=0.028  Sum_probs=116.9

Q ss_pred             CCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEE-EEeCCCcEEEEECCC----CcEEEEecccCccEEEEEEc--
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVII-SGSSDSTVRVWDVNT----GEMVNTLIHHCEAVLHLRFS--  323 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~----~~~~~~~~~~~~~i~~~~~~--  323 (486)
                      ...|+..|+.+.+....+.. .....++.++  ++.|+ +-..++.|..+++..    ......+.........++++  
T Consensus         9 ~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~   87 (316)
T 1ijq_A            9 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI   87 (316)
T ss_dssp             BSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred             CCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence            35688899888766555543 3456778874  44454 444568899999875    22222222222334566664  


Q ss_pred             CCeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-C-CcEEEEECCCceEEEEE-cCCc
Q psy9182         324 NGMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-D-RTIKVWNTSSCEFVRTL-NGHK  397 (486)
Q Consensus       324 ~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~-~~~~  397 (486)
                      .+.+ ++-..++.|.++|+.......   ...........++.  .+..++.+.. . +.|...++.. +....+ ...-
T Consensus        88 ~~~ly~~d~~~~~I~~~~~~g~~~~~---~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~  163 (316)
T 1ijq_A           88 HSNIYWTDSVLGTVSVADTKGVKRKT---LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENI  163 (316)
T ss_dssp             TTEEEEEETTTTEEEEEETTSSSEEE---EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSC
T ss_pred             CCeEEEEECCCCEEEEEeCCCCceEE---EEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCC
Confidence            4444 444667899999987543221   11222234455555  3555555544 2 6888888754 333333 2233


Q ss_pred             ccEEEEEeC--CCEEE-EEeCCCcEEEEECCCCeeeEEe-c--CcccCeEEEEecCCEE-EEEeCCCcEEEEeCCCC
Q psy9182         398 RGIACLQYR--DRLVV-SGSSDNTIRLWDIECGACLRVL-E--GHEELVRCIRFDAKRI-VSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       398 ~~v~~~~~~--~~~l~-~~~~dg~v~iwd~~~~~~~~~~-~--~h~~~v~~~~~~~~~l-~s~~~dg~v~iwdl~~~  467 (486)
                      .....++++  +..|. +-+..+.|..+|+.. .....+ .  ........|++++..| ++-...+.|..++..++
T Consensus       164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g  239 (316)
T 1ijq_A          164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  239 (316)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence            445666664  45554 444667999999874 323333 2  1223456777755554 44445677888886544

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.12  E-value=0.2  Score=51.28  Aligned_cols=228  Identities=11%  Similarity=0.113  Sum_probs=130.5

Q ss_pred             ccceEEEEeCC-CEEEEEecCCeEEEEECCCceeeEEE-cCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         234 SKGVYCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       234 ~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                      ...|.++..|. ..+..|+.+| +..||-...+..... ......|.++.. ....|..|+.+| +..||..+.+.....
T Consensus        21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~   98 (758)
T 3ott_A           21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPE   98 (758)
T ss_dssp             CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCS
T ss_pred             cceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcc
Confidence            44577777653 4677788777 666774332211100 112345888766 456788888766 889998876433211


Q ss_pred             cccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEe-eecCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCce
Q psy9182         311 IHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV-LVGHRAAVNVVDFD-EKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~~~~~-~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      ......|.++...++.+.+++.+ .+..||..+.+....... .......|.++..+ ...+..++.+ -|..+|..+++
T Consensus        99 ~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~  176 (758)
T 3ott_A           99 TDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGK  176 (758)
T ss_dssp             CCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTE
T ss_pred             cCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCc
Confidence            11233567776667788888876 688899876542211000 01123457777763 4445556654 47888987765


Q ss_pred             EEEEE-cCC----cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEec-CCEEEEEeCCCcEE
Q psy9182         389 FVRTL-NGH----KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-AKRIVSGAYDGKIK  460 (486)
Q Consensus       389 ~~~~~-~~~----~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~v~  460 (486)
                      ..... ...    ...|.++..+  +..|..|+. +-+..+|..+++...........|.++..| ...|..|+.+ -+.
T Consensus       177 ~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~  254 (758)
T 3ott_A          177 FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLY  254 (758)
T ss_dssp             EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEE
T ss_pred             eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-cee
Confidence            43211 111    2247777765  466666664 458889988765432211123457888773 4445556644 577


Q ss_pred             EEeCCCC
Q psy9182         461 VWNLVAA  467 (486)
Q Consensus       461 iwdl~~~  467 (486)
                      +++..+.
T Consensus       255 ~~~~~~~  261 (758)
T 3ott_A          255 VYHNDTT  261 (758)
T ss_dssp             EECCTTS
T ss_pred             EEecCCC
Confidence            8886653

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.11  E-value=0.31  Score=49.77  Aligned_cols=212  Identities=11%  Similarity=0.054  Sum_probs=118.3

Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEec--CC-EEEEEeCCCcEEEEECCCC----cEEEEecccCccEEEEEEc-
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ER-VIISGSSDSTVRVWDVNTG----EMVNTLIHHCEAVLHLRFS-  323 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~~-  323 (486)
                      ....|+..++........+.. ...+.+++++  .. ++++-...+.|+.+++...    .....+.........++++ 
T Consensus       402 n~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~  480 (791)
T 3m0c_C          402 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  480 (791)
T ss_dssp             CBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred             cccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence            445688888776655444443 4456677773  34 4445455678888888642    2222333223334455554 


Q ss_pred             -CC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CC-CcEEEEECCCceEEEEEcCCc
Q psy9182         324 -NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GD-RTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       324 -~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~~~~~  397 (486)
                       .+ ++++-...+.|.+.++.......+   ..........|++  .+.+|+.+. .. +.|...++........+...-
T Consensus       481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l---~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l  557 (791)
T 3m0c_C          481 IHSNIYWTDSVLGTVSVADTKGVKRKTL---FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI  557 (791)
T ss_dssp             TTTEEEEEETTTTEEEEEETTSSSEEEE---EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred             cCCcEEEEecCCCeEEEEeCCCCeEEEE---EeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence             44 555556678999999876543221   2222334556666  345555554 23 678888887544444444343


Q ss_pred             ccEEEEEeC--CCEEEEE-eCCCcEEEEECCCCeeeEEecC--cccCeEEEEecCCEEEEEe-CCCcEEEEeCCCC
Q psy9182         398 RGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEG--HEELVRCIRFDAKRIVSGA-YDGKIKVWNLVAA  467 (486)
Q Consensus       398 ~~v~~~~~~--~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~l~s~~-~dg~v~iwdl~~~  467 (486)
                      .....|+++  +..|+.+ ...+.|...++........+..  .-....+|++++.+|+.+. ..+.|...|..++
T Consensus       558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG  633 (791)
T 3m0c_C          558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  633 (791)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence            556667765  4444444 4567899999874433333332  2234557777555555544 4567777775554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.03  E-value=0.21  Score=46.57  Aligned_cols=244  Identities=11%  Similarity=0.011  Sum_probs=130.0

Q ss_pred             eEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccc
Q psy9182         118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETP  197 (486)
Q Consensus       118 ~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~  197 (486)
                      +|+.+. ...|+..++........+. ....+..++|+.              .++..+++-...+.|..+++...... 
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~--------------~~~~lywsD~~~~~I~~~~~~g~~~~-  147 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEV--------------ASNRIYWSDLSQRMICSTQLDRAHGV-  147 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEET--------------TTTEEEEEETTTTEEEEEEC-------
T ss_pred             eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeee--------------ccCceEEEecCCCeEEEEEcccCCCC-
Confidence            444443 3578888887665444433 334667888863              12223344444566666665321100 


Q ss_pred             cCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEECCCceeeEEEcCCccc
Q psy9182         198 IQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGS  276 (486)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~  276 (486)
                                              .....+.........-+++.+. +.++++-...+.|.+.++........+......
T Consensus       148 ------------------------~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~  203 (400)
T 3p5b_L          148 ------------------------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK  203 (400)
T ss_dssp             ------------------------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCC
T ss_pred             ------------------------CcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCC
Confidence                                    0000011111122334556653 444455556778999988765544444433344


Q ss_pred             EEEEEec--CCEEEEEeC--CCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceee
Q psy9182         277 VLCLQYD--ERVIISGSS--DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITL  349 (486)
Q Consensus       277 v~~~~~~--~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~  349 (486)
                      ...+++|  +..|+....  .+.|...++............-.....+++++  +.|+.+ ...+.|..+|+........
T Consensus       204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~  283 (400)
T 3p5b_L          204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI  283 (400)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred             cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence            6677764  455555442  37899999865443333333335567788873  455554 4567899999875443222


Q ss_pred             EEeeecCcccEEEEEeCCC-EEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         350 RRVLVGHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       350 ~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                      . .....-.....++.++. .+++-...+.|..+|..+++.+..+.........+
T Consensus       284 ~-~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i  337 (400)
T 3p5b_L          284 L-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDM  337 (400)
T ss_dssp             E-ECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEE
T ss_pred             E-eCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceE
Confidence            1 11112233445666444 45555566789999988887776665443333333

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.02  E-value=0.034  Score=50.11  Aligned_cols=188  Identities=13%  Similarity=0.108  Sum_probs=104.3

Q ss_pred             EEeCCCEEEEEec----C-------CeEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC--------CcEEE
Q psy9182         240 LQYDDHKIVSGLR----D-------NTIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD--------STVRV  298 (486)
Q Consensus       240 ~~~~~~~l~~~~~----d-------g~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d--------g~i~v  298 (486)
                      ...++..++.|+.    +       ..+.+||..+.+-...  +........+...++..++.|+.+        ..+.+
T Consensus        42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~  121 (315)
T 4asc_A           42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC  121 (315)
T ss_dssp             ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE
T ss_pred             EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEE
Confidence            3457788888874    1       1277889887653221  111111112334477777777742        45899


Q ss_pred             EECCCCcEEEE--ecccCccEEEEEEcCCeEEEEeC-C-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEE
Q psy9182         299 WDVNTGEMVNT--LIHHCEAVLHLRFSNGMMVTCSK-D-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYI  370 (486)
Q Consensus       299 wd~~~~~~~~~--~~~~~~~i~~~~~~~~~l~~~~~-d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l  370 (486)
                      ||..+++-...  +.........+...+..++.|+. +     ..+.+||+.+.+-.. ............++..+++.+
T Consensus       122 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iy  200 (315)
T 4asc_A          122 YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE-LAPMQTARSLFGATVHDGRII  200 (315)
T ss_dssp             EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEE
T ss_pred             ECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEE-CCCCCCchhceEEEEECCEEE
Confidence            99987754322  11112222333344556666665 2     468999987753221 111222223334445588888


Q ss_pred             EEEeCCC-----cEEEEECCCceEEEE--EcCCcccEEEEEeCCCEEEEEeCCC--------------cEEEEECCCCe
Q psy9182         371 VSASGDR-----TIKVWNTSSCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN--------------TIRLWDIECGA  428 (486)
Q Consensus       371 ~~~~~d~-----~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg--------------~v~iwd~~~~~  428 (486)
                      +.|+.++     .+.+||+.+.+-...  +........++..++.+++.|+.++              .|.+||+++.+
T Consensus       201 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  279 (315)
T 4asc_A          201 VAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK  279 (315)
T ss_dssp             EEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred             EEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence            8877654     588999987654332  2222233355566788888887642              47788887654

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.00  E-value=0.51  Score=50.48  Aligned_cols=307  Identities=10%  Similarity=0.126  Sum_probs=153.1

Q ss_pred             ceEEEeecCceeeecccccccceeee-cCcccceeEEEeecceeEecCCCCceeccCcceeecCCC-CCcceeeeccccc
Q psy9182         117 KYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH-DDTILIWDFLNYS  194 (486)
Q Consensus       117 ~~l~tg~~dg~v~iWd~~~~~~~~~l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~-dg~i~vWd~~~~~  194 (486)
                      .+++.++ ++.+.++++..+++...- ..-...|.|+++.+.      .++.   .....++.|.. |++++++++.+..
T Consensus       524 ~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~------~~~~---~~s~~~aVg~~~d~tv~I~sL~~l~  593 (1158)
T 3ei3_A          524 SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPL------GDSN---GLSPLCAIGLWTDISARILKLPSFE  593 (1158)
T ss_dssp             SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCC------SSST---TCCSEEEEEETTTTEEEEEETTTCC
T ss_pred             CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecC------CCCc---ccccEEEEEECCCCEEEEEECCCCC
Confidence            3555554 567777777655422111 112347888887531      0010   12456777775 9999999985422


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeC-CCEEEEEecCCeEEEEEC--CCceeeE---
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYD-DHKIVSGLRDNTIKVWDR--VSLQCIK---  268 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~--~~~~~~~---  268 (486)
                      .....                          .+.. ...+..+...... ..+|.+|-.||.+.-+.+  .+++...   
T Consensus       594 ~~~~~--------------------------~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~  646 (1158)
T 3ei3_A          594 LLHKE--------------------------MLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK  646 (1158)
T ss_dssp             EEEEE--------------------------ECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEE
T ss_pred             eEEEE--------------------------ECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcccccee
Confidence            11110                          0000 0011122222222 346889999998765544  4444432   


Q ss_pred             EEcCCcccEEE--EEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEE-EEEc----CCeEEEEeCCCcEEEEEC
Q psy9182         269 VLTGHTGSVLC--LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH-LRFS----NGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       269 ~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~-~~~~----~~~l~~~~~dg~i~i~d~  341 (486)
                      .+-| ..++.-  +...+..-+.+..+....++--+ +..... ......+.. ..|+    ++-++..+ ++.++|..+
T Consensus       647 ~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i  722 (1158)
T 3ei3_A          647 VTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTI  722 (1158)
T ss_dssp             EECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEE
T ss_pred             EEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcccCCCcEEEEc-CCceEEEEe
Confidence            2223 223322  22234333333445555555543 332221 111222322 2343    34455444 456888887


Q ss_pred             CCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe---------------------------------------------
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS---------------------------------------------  374 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~---------------------------------------------  374 (486)
                      .............  ...+..+.+  +.+.++.+.                                             
T Consensus       723 ~~~~~~~~~~ipL--~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  800 (1158)
T 3ei3_A          723 DEIQKLHIRTVPL--YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSF  800 (1158)
T ss_dssp             CCSSSEEEEEEEC--SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------C
T ss_pred             cccCCeeEEEEeC--CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhc
Confidence            6544332222211  122333333  122211111                                             


Q ss_pred             ----CCCcEEEEECCCceEEEEEcCCc-ccEEEEE---eC---CCEEEEEe----------CCCcEEEEECCCCeeeEEe
Q psy9182         375 ----GDRTIKVWNTSSCEFVRTLNGHK-RGIACLQ---YR---DRLVVSGS----------SDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       375 ----~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~---~~---~~~l~~~~----------~dg~v~iwd~~~~~~~~~~  433 (486)
                          .-+.|++.|..+++.+..++-.. ..+.++.   +.   ..++++|+          ..|.|.+|++..++.....
T Consensus       801 g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~  880 (1158)
T 3ei3_A          801 GEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVA  880 (1158)
T ss_dssp             CCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEE
T ss_pred             CCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEE
Confidence                01357888888888776665332 3344443   32   47888887          3488999999754432222


Q ss_pred             -cCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         434 -EGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       434 -~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                       ....++|++++- .| +|++|- ..+|++|++....
T Consensus       881 ~~~v~g~v~al~~~~g-~Lla~i-g~~l~vy~l~~~~  915 (1158)
T 3ei3_A          881 EKEVKGAVYSMVEFNG-KLLASI-NSTVRLYEWTTEK  915 (1158)
T ss_dssp             EEEESSCEEEEEEETT-EEEEEE-TTEEEEEEECTTS
T ss_pred             EEEcCCcCEEEeeeCC-EEEEEc-CCEEEEEECCCCc
Confidence             224678999887 66 444443 5789999997653

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.98  E-value=0.2  Score=47.27  Aligned_cols=224  Identities=8%  Similarity=0.051  Sum_probs=117.2

Q ss_pred             ceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCC-C----cEEEEECCCCcEE
Q psy9182         236 GVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSD-S----TVRVWDVNTGEMV  307 (486)
Q Consensus       236 ~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-g----~i~vwd~~~~~~~  307 (486)
                      .-+++++ ++..|+++...+.|+.+|...+....... .......+++  +++.|+++... +    .+...+.. +...
T Consensus       140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~  217 (430)
T 3tc9_A          140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFK  217 (430)
T ss_dssp             CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSC
T ss_pred             CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Ccee
Confidence            3456676 35566666655889999998876554443 3445667777  57756665542 2    23444432 2211


Q ss_pred             --EEecccCccEEEEEEcC--CeEEE-EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcE
Q psy9182         308 --NTLIHHCEAVLHLRFSN--GMMVT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTI  379 (486)
Q Consensus       308 --~~~~~~~~~i~~~~~~~--~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i  379 (486)
                        ..+.. ......+++++  +.+++ -..++.|..++...+..... ... +.......+++  ++++|+.+ ...+.|
T Consensus       218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~-~~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I  294 (430)
T 3tc9_A          218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL-FTI-QDSGWEFHIQFHPSGNYAYIVVVNQHYI  294 (430)
T ss_dssp             SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE-EEC-SSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred             eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-EEc-CCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence              22221 22334556665  34444 44678899999876543211 111 11223445555  78855544 467789


Q ss_pred             EEEECCC--ceE--EEEEcCC------c---------ccEE-EEEeC----------CCEEEEEeCCCcEEEEECCCCee
Q psy9182         380 KVWNTSS--CEF--VRTLNGH------K---------RGIA-CLQYR----------DRLVVSGSSDNTIRLWDIECGAC  429 (486)
Q Consensus       380 ~iwd~~~--~~~--~~~~~~~------~---------~~v~-~~~~~----------~~~l~~~~~dg~v~iwd~~~~~~  429 (486)
                      ..++...  ++.  +..+.+.      .         ..-. .+..+          +.+.++-...+.|+.++ ..|+.
T Consensus       295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v  373 (430)
T 3tc9_A          295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV  373 (430)
T ss_dssp             EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred             EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence            9987653  222  1222211      0         0111 23331          34455545567888888 44654


Q ss_pred             eEEecC----c----c---------cCeEEEEec--CCEEEEEe-CCCcEEEEeCC
Q psy9182         430 LRVLEG----H----E---------ELVRCIRFD--AKRIVSGA-YDGKIKVWNLV  465 (486)
Q Consensus       430 ~~~~~~----h----~---------~~v~~~~~~--~~~l~s~~-~dg~v~iwdl~  465 (486)
                      ......    .    .         .....|+++  +..|+.+. ..+.|+.++++
T Consensus       374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence            333311    0    1         146778884  35555554 45678777754

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=96.97  E-value=0.24  Score=46.22  Aligned_cols=213  Identities=10%  Similarity=0.028  Sum_probs=122.0

Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEE-eCCCcEEEEECCCC----cEEEEecccCccEEEEEEc-
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTG----EMVNTLIHHCEAVLHLRFS-  323 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~~~~~i~~~~~~-  323 (486)
                      ....|+..++........+. ....+..++++  +..|+.+ ...+.|+.+++...    .....+.........++++ 
T Consensus        90 ~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~  168 (400)
T 3p5b_L           90 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  168 (400)
T ss_dssp             ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred             ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence            35688888888765555444 34566788884  4455444 45678988988652    2233333334455666665 


Q ss_pred             -CC-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC--CCcEEEEECCCceEEEEEcCCc
Q psy9182         324 -NG-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG--DRTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       324 -~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~  397 (486)
                       .+ ++++-...+.|.+.++........   ....-.....+++  .+.+|+.+..  .+.|...++........+...-
T Consensus       169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l---~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l  245 (400)
T 3p5b_L          169 IHSNIYWTDSVLGTVSVADTKGVKRKTL---FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI  245 (400)
T ss_dssp             TTTEEEEEETTTTEEEEECTTTCSEEEE---EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC
T ss_pred             cCCceEEEECCCCeEEEEeCCCCceEEE---EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC
Confidence             34 444555678899999876543221   2222233455555  3455555542  3688888887544333333333


Q ss_pred             ccEEEEEeC--CCEEEEE-eCCCcEEEEECCCCeeeEEecC--cccCeEEEEecCCE-EEEEeCCCcEEEEeCCCCC
Q psy9182         398 RGIACLQYR--DRLVVSG-SSDNTIRLWDIECGACLRVLEG--HEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       398 ~~v~~~~~~--~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~~  468 (486)
                      .....++++  +..|..+ ...+.|..+|+...........  ......+|+.++.. +++-...+.|..+|..++.
T Consensus       246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~  322 (400)
T 3p5b_L          246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  322 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred             CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence            455667765  5555444 4568899999874433222222  23345577774444 5555566788888855543

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.92  E-value=0.0046  Score=55.93  Aligned_cols=143  Identities=9%  Similarity=0.161  Sum_probs=88.0

Q ss_pred             CCEEEEEeCCCcEEEEECCCCcEEEEeccc-CccEEEEEE----cCCeEEEE--eCCCcEEEEECCCCCceeeEEeeec-
Q psy9182         284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHH-CEAVLHLRF----SNGMMVTC--SKDRSIAVWDMVSPNEITLRRVLVG-  355 (486)
Q Consensus       284 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~i~~~~~----~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~-  355 (486)
                      +..+++++.||.|.-+|..+|+...++... ..++....-    .++.++++  +.||.|..+|..++....... ... 
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~-~~~l   88 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS-IRQL   88 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE-HHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec-cccc
Confidence            457889999999999999999999998764 122222111    12244444  589999999988764321111 110 


Q ss_pred             -CcccEEE---EEe-------CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-------cEEEEE-------eCCCEE
Q psy9182         356 -HRAAVNV---VDF-------DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-------GIACLQ-------YRDRLV  410 (486)
Q Consensus       356 -~~~~v~~---~~~-------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~v~~~~-------~~~~~l  410 (486)
                       ...++..   ...       .+..+++|+.+|.+...|+.+|+.+..+.....       ...|..       ..+..+
T Consensus        89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v  168 (339)
T 2be1_A           89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI  168 (339)
T ss_dssp             HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred             eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence             1111211   001       567889999999999999999999999874321       111221       124567


Q ss_pred             EEEeCCCcEEEEECCCCe
Q psy9182         411 VSGSSDNTIRLWDIECGA  428 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~~~  428 (486)
                      +.+..+..+.+.+ ++|+
T Consensus       169 ~ig~~~y~v~~~~-~sG~  185 (339)
T 2be1_A          169 VIGKTIFELGIHS-YDGA  185 (339)
T ss_dssp             EEEEEEEECEECC-TTSC
T ss_pred             EEecceEEEEEEC-CCCC
Confidence            7777777777766 4454

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.92  E-value=0.45  Score=48.57  Aligned_cols=158  Identities=13%  Similarity=0.022  Sum_probs=92.3

Q ss_pred             ceEEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEeC--CCcEEEEECCCCcEEEEe
Q psy9182         236 GVYCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSS--DSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       236 ~v~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~--dg~i~vwd~~~~~~~~~~  310 (486)
                      .-+++.+.++.| ++-...+.|.+.++........+.........|+++  ...|+.+..  .+.|...++........+
T Consensus       474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv  553 (791)
T 3m0c_C          474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV  553 (791)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred             ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence            346667666544 455567889999987655444444344456677774  345555543  267999998754444344


Q ss_pred             cccCccEEEEEEc--CCeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEE-eCCCcEEEEECCC
Q psy9182         311 IHHCEAVLHLRFS--NGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSA-SGDRTIKVWNTSS  386 (486)
Q Consensus       311 ~~~~~~i~~~~~~--~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~d~~i~iwd~~~  386 (486)
                      ...-.....|+++  .+.|+.+ ...+.|..+++.......... ....-.....+++.+..|+.+ ...+.|...|..+
T Consensus       554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~-~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~t  632 (791)
T 3m0c_C          554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT  632 (791)
T ss_dssp             CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-CTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred             eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec-CCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCC
Confidence            4334566778876  4455554 456789999986654332221 111222344666655555544 4567788888777


Q ss_pred             ceEEEEEc
Q psy9182         387 CEFVRTLN  394 (486)
Q Consensus       387 ~~~~~~~~  394 (486)
                      ++.+..+.
T Consensus       633 G~~~~~l~  640 (791)
T 3m0c_C          633 GSDVNLLA  640 (791)
T ss_dssp             CCCCEEEE
T ss_pred             CcceEEee
Confidence            76555553

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=96.80  E-value=0.057  Score=55.27  Aligned_cols=130  Identities=10%  Similarity=-0.028  Sum_probs=67.3

Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCCce-EE--EEEc-CCcccEEEEE-
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNTSSCE-FV--RTLN-GHKRGIACLQ-  404 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~~~~~-~~--~~~~-~~~~~v~~~~-  404 (486)
                      .|+.+++.++..................+.+  ||++|+..+.   ...|.++|+.++. ..  ..+. ........+. 
T Consensus       248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~  327 (751)
T 2xe4_A          248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM  327 (751)
T ss_dssp             EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred             EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence            5777887665321111111112223344445  8888776652   3468889988752 12  3332 3334445555 


Q ss_pred             eCCCEEEEEeC-C----CcEEEEECCCCeeeEE-ecCccc--CeEEEEecCCE-EEEEeCCCcE--EEEeC
Q psy9182         405 YRDRLVVSGSS-D----NTIRLWDIECGACLRV-LEGHEE--LVRCIRFDAKR-IVSGAYDGKI--KVWNL  464 (486)
Q Consensus       405 ~~~~~l~~~~~-d----g~v~iwd~~~~~~~~~-~~~h~~--~v~~~~~~~~~-l~s~~~dg~v--~iwdl  464 (486)
                      ..+..|+..+. +    ..|..+|+.++..... +..|..  .+..+.++++. +++...||..  .++++
T Consensus       328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred             eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence            34665554443 3    3577777765322222 222322  45677775555 5666677764  45554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.74  E-value=0.3  Score=43.87  Aligned_cols=155  Identities=10%  Similarity=-0.036  Sum_probs=88.8

Q ss_pred             eEEEEeCCC-EEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEe--CCCcEEEEECCCCcEEEEec
Q psy9182         237 VYCLQYDDH-KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS--SDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       237 v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~dg~i~vwd~~~~~~~~~~~  311 (486)
                      -+++.+.+. ++++-...+.|.+++.........+.........++++  +..|+.+.  ..+.|...++..........
T Consensus        83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~  162 (318)
T 3sov_A           83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN  162 (318)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred             EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence            355665444 44455566789999976543333333333445666663  45555554  25788888876433222222


Q ss_pred             ccCccEEEEEEcC--CeEEE-EeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC-EEEEEeCCCcEEEEECCCc
Q psy9182         312 HHCEAVLHLRFSN--GMMVT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-YIVSASGDRTIKVWNTSSC  387 (486)
Q Consensus       312 ~~~~~i~~~~~~~--~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~iwd~~~~  387 (486)
                      ..-..-..+++++  +.|+. -+..+.|..+|+.......   ...+.......+++++. .+++-...+.|..+|..++
T Consensus       163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~---~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G  239 (318)
T 3sov_A          163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA---VVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG  239 (318)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEE---EecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence            3334457788874  44544 4567889999987543221   11222334455666444 4445456678999998777


Q ss_pred             eEEEEEc
Q psy9182         388 EFVRTLN  394 (486)
Q Consensus       388 ~~~~~~~  394 (486)
                      +....+.
T Consensus       240 ~~~~~i~  246 (318)
T 3sov_A          240 EGLREIH  246 (318)
T ss_dssp             CSCEEEE
T ss_pred             CceEEEe
Confidence            7655554

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.73  E-value=0.1  Score=46.98  Aligned_cols=188  Identities=11%  Similarity=0.111  Sum_probs=101.8

Q ss_pred             EEeCCCEEEEEec----CC-------eEEEEECCCceeeEE--EcCCcccEEEEEecCCEEEEEeCC-------CcEEEE
Q psy9182         240 LQYDDHKIVSGLR----DN-------TIKVWDRVSLQCIKV--LTGHTGSVLCLQYDERVIISGSSD-------STVRVW  299 (486)
Q Consensus       240 ~~~~~~~l~~~~~----dg-------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-------g~i~vw  299 (486)
                      ...++..++.|+.    ++       .+.+||..+.+-...  +........+...++..++.|+.+       ..+.+|
T Consensus        53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y  132 (318)
T 2woz_A           53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCY  132 (318)
T ss_dssp             ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred             EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEE
Confidence            3457778888873    12       277888877653321  111111223344477778887754       348889


Q ss_pred             ECCCCcEEEEecc--cCccEEEEEEcCCeEEEEeC------CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEE
Q psy9182         300 DVNTGEMVNTLIH--HCEAVLHLRFSNGMMVTCSK------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV  371 (486)
Q Consensus       300 d~~~~~~~~~~~~--~~~~i~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~  371 (486)
                      |..+.+-...-..  .......+...+..++.|+.      -..+.+||+.+.+-.. ............++..+++.++
T Consensus       133 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv  211 (318)
T 2woz_A          133 DPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD-LAPMKTPRSMFGVAIHKGKIVI  211 (318)
T ss_dssp             ETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEE
T ss_pred             eCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEE-CCCCCCCcccceEEEECCEEEE
Confidence            9987754432111  11111223334445555553      2458999988754221 1112222222334455777777


Q ss_pred             EEeCC-----CcEEEEECCCceEEE--EEcCCcccEEEEEeCCCEEEEEeCC--------------CcEEEEECCCCe
Q psy9182         372 SASGD-----RTIKVWNTSSCEFVR--TLNGHKRGIACLQYRDRLVVSGSSD--------------NTIRLWDIECGA  428 (486)
Q Consensus       372 ~~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d--------------g~v~iwd~~~~~  428 (486)
                      .|+.+     ..+.+||+.+.+-..  .+........++..++.+++.|+.+              ..+.+||+.+.+
T Consensus       212 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  289 (318)
T 2woz_A          212 AGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE  289 (318)
T ss_dssp             EEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred             EcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence            77643     357789988754322  2222223334556678888877754              357888887654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.72  E-value=0.014  Score=59.12  Aligned_cols=205  Identities=11%  Similarity=-0.024  Sum_probs=106.7

Q ss_pred             EEEEeCCCEEEEE-ecCCeEEEEECCC----ceeeEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEE
Q psy9182         238 YCLQYDDHKIVSG-LRDNTIKVWDRVS----LQCIKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       238 ~~~~~~~~~l~~~-~~dg~i~i~d~~~----~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~  309 (486)
                      +++.+.+..|+.. ...+.|+.+++..    ......+.........|++   .++++++-...+.|.++++........
T Consensus       411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l  490 (699)
T 1n7d_A          411 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL  490 (699)
T ss_dssp             CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEE
T ss_pred             EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEE
Confidence            3455555555554 3457888888765    2222222111112233444   344445545568899999875544433


Q ss_pred             ecccCccEEEEEEcC--CeEEEEeC--CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--C-CCEEEEEeCCCcEEEE
Q psy9182         310 LIHHCEAVLHLRFSN--GMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--D-EKYIVSASGDRTIKVW  382 (486)
Q Consensus       310 ~~~~~~~i~~~~~~~--~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~-~~~l~~~~~d~~i~iw  382 (486)
                      +.........+++++  +.|+.+..  .+.|..+++.......   .....-.....+++  + +.++++-...+.|..+
T Consensus       491 ~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~---l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~  567 (699)
T 1n7d_A          491 FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI  567 (699)
T ss_dssp             CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE---ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred             EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE---EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEE
Confidence            333233445666654  34444432  2678877775433211   11111223334555  3 4455555567789999


Q ss_pred             ECCCceEEEEEcC--CcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         383 NTSSCEFVRTLNG--HKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       383 d~~~~~~~~~~~~--~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      |+........+..  .......++++ +.++++....+.|..++..+|+.+..+.........|++
T Consensus       568 d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v  633 (699)
T 1n7d_A          568 DVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL  633 (699)
T ss_dssp             CSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred             ccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence            9865332222221  11222344444 444555556789999999888887777543333444444

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.69  E-value=0.33  Score=43.75  Aligned_cols=187  Identities=10%  Similarity=0.229  Sum_probs=113.5

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe------cCC---EEEEEeC---CCcEEEEEC--CCCcEEE
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY------DER---VIISGSS---DSTVRVWDV--NTGEMVN  308 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~------~~~---~l~~~~~---dg~i~vwd~--~~~~~~~  308 (486)
                      ...+++.....+-+.+||+ +|+.++.+..  +.+..+..      .++   ++++...   +++|.+|++  .+++ +.
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~  114 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ  114 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence            3455666667789999999 8888888864  34444433      333   2333333   478999966  4443 44


Q ss_pred             Eecc------cC-ccEEEEEE--cC--C--eEEEEeCCCcEEEEECCC---CC-ceeeEEeeecCcccEEEEEe--CCCE
Q psy9182         309 TLIH------HC-EAVLHLRF--SN--G--MMVTCSKDRSIAVWDMVS---PN-EITLRRVLVGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       309 ~~~~------~~-~~i~~~~~--~~--~--~l~~~~~dg~i~i~d~~~---~~-~~~~~~~~~~~~~~v~~~~~--~~~~  369 (486)
                      .+..      .. ..+..+++  ++  +  ++++...+|.+..|++..   +. .....+.+.. ...+..+..  ....
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~  193 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR  193 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred             eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence            4421      11 33444555  43  2  688888999999999843   21 1122222222 345555666  4578


Q ss_pred             EEEEeCCCcEEEEECC-----CceEEEEEc-CCc-ccEEEEEe----CCC-EEEEEe-CCCcEEEEECC-CCeeeEEec
Q psy9182         370 IVSASGDRTIKVWNTS-----SCEFVRTLN-GHK-RGIACLQY----RDR-LVVSGS-SDNTIRLWDIE-CGACLRVLE  434 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~-----~~~~~~~~~-~~~-~~v~~~~~----~~~-~l~~~~-~dg~v~iwd~~-~~~~~~~~~  434 (486)
                      |+.+-.+.-|..+|.+     +++.+..+. ++- ..+..+..    +++ +|++++ .+++..+||.+ +.+.+..+.
T Consensus       194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR  272 (355)
T ss_dssp             EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence            9999888777777755     355665553 222 24555555    233 666665 67899999996 677777773

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=96.68  E-value=0.7  Score=47.28  Aligned_cols=219  Identities=11%  Similarity=0.134  Sum_probs=124.8

Q ss_pred             eEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec----
Q psy9182         237 VYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI----  311 (486)
Q Consensus       237 v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----  311 (486)
                      +.++.. ....|.+|+.+| +..||..+.+...........|.++..+...|..++.+ -+..+|..+++......    
T Consensus        65 i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~  142 (758)
T 3ott_A           65 IYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNG  142 (758)
T ss_dssp             EEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHC
T ss_pred             EEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCC
Confidence            444433 345778887665 78999887654331111223466665555567777776 58889987766443211    


Q ss_pred             ccCccEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeec---CcccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         312 HHCEAVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG---HRAAVNVVDFD--EKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       312 ~~~~~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~v~~~~~~--~~~l~~~~~d~~i~iwd~~  385 (486)
                      .....|.++... .+.+.+|+.+ .+..||..+..... ......   ....|.++..+  +..|..|+. +-+..+|..
T Consensus       143 l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~  219 (758)
T 3ott_A          143 LPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPS  219 (758)
T ss_dssp             CSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETT
T ss_pred             cCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCC
Confidence            123457777776 5677777765 57778876543211 110000   12347777664  455666664 458889988


Q ss_pred             CceEEEEEcCCcccEEEEEeC-CCEEEEEeCCCcEEEEECCCCeeeEEecC-------cccCeEEEEecC-CEEEEEeCC
Q psy9182         386 SCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEG-------HEELVRCIRFDA-KRIVSGAYD  456 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~-~~l~s~~~d  456 (486)
                      +++...........|.++..+ ...|..|+.+ -+.+++..+++.......       ....|.++..|. ..|-.|+..
T Consensus       220 ~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~  298 (758)
T 3ott_A          220 TGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDY  298 (758)
T ss_dssp             TTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESS
T ss_pred             CCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCC
Confidence            765432211123457777775 4456666654 578888876543322111       123588888743 345566666


Q ss_pred             CcEEEE
Q psy9182         457 GKIKVW  462 (486)
Q Consensus       457 g~v~iw  462 (486)
                      | +.+.
T Consensus       299 G-l~~~  303 (758)
T 3ott_A          299 G-ISLS  303 (758)
T ss_dssp             S-EEEE
T ss_pred             c-cccc
Confidence            6 5444

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=96.67  E-value=0.34  Score=43.55  Aligned_cols=212  Identities=10%  Similarity=0.029  Sum_probs=116.6

Q ss_pred             CCeEEEEECCCce--eeEEEcCCcccEEEEEec---CCEEEEEeCCCcEEEEECCCCcEE-EEecccCccEEEEEEc--C
Q psy9182         253 DNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQYD---ERVIISGSSDSTVRVWDVNTGEMV-NTLIHHCEAVLHLRFS--N  324 (486)
Q Consensus       253 dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~i~~~~~~--~  324 (486)
                      ...|+..++....  ....+. ......++.|+   +.+.++-...+.|..+++..+... ..+.........+++.  .
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~   90 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG   90 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred             cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence            4578888887653  222222 22345677773   445555556788999998765321 1122212233445554  4


Q ss_pred             C-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCccc
Q psy9182         325 G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRG  399 (486)
Q Consensus       325 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~  399 (486)
                      + .+++-...+.|.++++.......   ...........+++  .+..|+.+.  ..+.|...++............-..
T Consensus        91 g~ly~~d~~~~~I~~~~~dG~~~~~---l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~  167 (318)
T 3sov_A           91 EKLYWTDSETNRIEVSNLDGSLRKV---LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW  167 (318)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSCEE---EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred             CeEEEEECCCCEEEEEECCCCcEEE---EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence            4 44455567889999987543221   11122334455555  345555555  2578888887643322222222334


Q ss_pred             EEEEEeC--CCEE-EEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCE-EEEEeCCCcEEEEeCCCCC
Q psy9182         400 IACLQYR--DRLV-VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       400 v~~~~~~--~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl~~~~  468 (486)
                      ...++++  +..| ++-+..+.|..+|+..........+.......+++++.. +++-...+.|..++..++.
T Consensus       168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~  240 (318)
T 3sov_A          168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE  240 (318)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence            4566664  4544 444567889999987433322333334456677775544 4454556788888886554

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.59  E-value=0.16  Score=54.37  Aligned_cols=220  Identities=12%  Similarity=0.141  Sum_probs=128.1

Q ss_pred             EEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCC-cEEEEeccc----
Q psy9182         240 LQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTG-EMVNTLIHH----  313 (486)
Q Consensus       240 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~----  313 (486)
                      ++|..+.+|.-. ..++.|||+.+...++.+.- ...|.-..| +.+.|+..+. ..|+.|++... .+.+.+..|    
T Consensus        73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~  149 (1630)
T 1xi4_A           73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLA  149 (1630)
T ss_pred             cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEcC-CeEEEeccCCCCccHHHHhcchhcc
Confidence            455565555543 67899999999888877664 346777788 7777776664 46999999642 333333222    


Q ss_pred             CccEEEEEEcCC---eEEEEe------CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCC-----CEEEEEeC---C
Q psy9182         314 CEAVLHLRFSNG---MMVTCS------KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE-----KYIVSASG---D  376 (486)
Q Consensus       314 ~~~i~~~~~~~~---~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~---d  376 (486)
                      ...|..-..+++   .+++|-      -.|.+.+|..+.+..    +.+.||......+..+|     ..++.+..   .
T Consensus       150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s----Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g  225 (1630)
T 1xi4_A          150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG  225 (1630)
T ss_pred             cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc----hhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence            334544444443   333332      357888888766432    44556666555555432     12222221   2


Q ss_pred             CcEEEEECCCc---eEEE------EEcCC---cccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEE
Q psy9182         377 RTIKVWNTSSC---EFVR------TLNGH---KRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC  442 (486)
Q Consensus       377 ~~i~iwd~~~~---~~~~------~~~~~---~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  442 (486)
                      +.++|-++...   ....      .+-..   ..-..++..+  -..+..-+.-|.|.++|+.+|.++..-+-...+|..
T Consensus       226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~  305 (1630)
T 1xi4_A          226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV  305 (1630)
T ss_pred             ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEE
Confidence            68888887542   1111      00000   1111233333  456777888999999999999988766555555655


Q ss_pred             EEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         443 IRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       443 ~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      .+.  ...-++.....|.|.--.++.
T Consensus       306 ~~~~~~~~g~~~vnr~G~vl~v~v~~  331 (1630)
T 1xi4_A          306 TAPHEATAGIIGVNRKGQVLSVCVEE  331 (1630)
T ss_pred             eccCCCCCceEEEcCCceEEEEEEcc
Confidence            554  333455556677766555554

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.59  E-value=0.019  Score=58.08  Aligned_cols=157  Identities=11%  Similarity=-0.002  Sum_probs=82.6

Q ss_pred             EEEEeCC-CEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEEEEecc
Q psy9182         238 YCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       238 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~  312 (486)
                      +++.+.+ .++++-...+.|.+++.........+.........+++  .+..|+.+..  .+.|..+++........+..
T Consensus       458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~  537 (699)
T 1n7d_A          458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  537 (699)
T ss_dssp             EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred             EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence            3444433 34444455678999987755433333322233445555  3344444332  26788887753322222222


Q ss_pred             cCccEEEEEEcC--C-eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEE-EEeCCCcEEEEECCCce
Q psy9182         313 HCEAVLHLRFSN--G-MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV-SASGDRTIKVWNTSSCE  388 (486)
Q Consensus       313 ~~~~i~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~~~~d~~i~iwd~~~~~  388 (486)
                      .-.....|++++  + ++++-...+.|..+|+.......... ..........+++++..|+ +....+.|..+|..+++
T Consensus       538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS  616 (699)
T ss_dssp             SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECC-CSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEE
T ss_pred             CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEe-cCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCC
Confidence            223345677763  3 44455567789999987543221111 1111122334455444444 44556889999988888


Q ss_pred             EEEEEcC
Q psy9182         389 FVRTLNG  395 (486)
Q Consensus       389 ~~~~~~~  395 (486)
                      .+..+..
T Consensus       617 ~~~~i~~  623 (699)
T 1n7d_A          617 DVNLLAE  623 (699)
T ss_dssp             EEECCCT
T ss_pred             ceEEeec
Confidence            7777653

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.43  E-value=0.84  Score=45.27  Aligned_cols=231  Identities=13%  Similarity=0.080  Sum_probs=114.3

Q ss_pred             ceEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEe-CCCcEEEEECCCCcEEEEeccc
Q psy9182         236 GVYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS-SDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      .-+++.++++.|+.+ ...+.|..+|+..........+......++++++..++.+. ..+.|...|..+++....+...
T Consensus       174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~  253 (619)
T 3s94_A          174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSD  253 (619)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSC
T ss_pred             cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecC
Confidence            345666656665555 44567888888764443333322222345666555555554 4678888888776543322110


Q ss_pred             C----------------------------c----------cEEEEEEc--------------CCeEEEEeCCCcEEEEEC
Q psy9182         314 C----------------------------E----------AVLHLRFS--------------NGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       314 ~----------------------------~----------~i~~~~~~--------------~~~l~~~~~dg~i~i~d~  341 (486)
                      .                            +          ...|.+..              +..++.-+..+.|+..++
T Consensus       254 ~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l  333 (619)
T 3s94_A          254 IFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISL  333 (619)
T ss_dssp             CCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEES
T ss_pred             CCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEec
Confidence            0                            0          01111111              011222233456666666


Q ss_pred             CCCCceeeEEeeecCcccEEEEEeC--CCEEEE-EeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC---CCEEEEEeC
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDFD--EKYIVS-ASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR---DRLVVSGSS  415 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~  415 (486)
                      .......... ....-..+.+++++  ++.|+. -...+.|+.+++........+.........++++   +++.++-+.
T Consensus       334 ~~~~~~~~~~-~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~  412 (619)
T 3s94_A          334 DTPDFTDIVL-QLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTG  412 (619)
T ss_dssp             SSTTCCCEEC-CCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT
T ss_pred             CCCccceeEE-eccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCC
Confidence            5543211111 11112345677774  344444 4457788888887544333333322334445543   455666666


Q ss_pred             CCcEEEEECCCCeeeEEecCcccCeEEEEecC--CEEEEEeC--CCcEEEEeCCCC
Q psy9182         416 DNTIRLWDIECGACLRVLEGHEELVRCIRFDA--KRIVSGAY--DGKIKVWNLVAA  467 (486)
Q Consensus       416 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~~~--dg~v~iwdl~~~  467 (486)
                      .+.|.+.++........+...-....+|++|+  .+|.-+..  .+.|...+++..
T Consensus       413 ~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~  468 (619)
T 3s94_A          413 TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS  468 (619)
T ss_dssp             TTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             CCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC
Confidence            78999999874433222233345677888842  34444432  355666666543

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.30  E-value=1  Score=44.72  Aligned_cols=317  Identities=10%  Similarity=-0.010  Sum_probs=148.9

Q ss_pred             ccccCCccCcceEE-EeecCceeeecccccccc-eeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         107 FISLLPNFDEKYIV-SASGDRTIKVWNTSSCEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       107 ~~~~~~s~~~~~l~-tg~~dg~v~iWd~~~~~~-~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      ...+.+++.+..|. +-...+.|..+++..... ...+.........++++.              ..+..+++-...+.
T Consensus        42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~--------------~~~~ly~~d~~~~~  107 (619)
T 3s94_A           42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW--------------LGEKLYWTDSETNR  107 (619)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEET--------------TTTEEEEEETTTTE
T ss_pred             eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe--------------cCCEEEEEeCCCCE
Confidence            44556666444444 444467787777765432 222332223456666651              02333444445566


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec--CCeEEEEECC
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR--DNTIKVWDRV  262 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~--dg~i~i~d~~  262 (486)
                      |.+.+++......                             +.........-+++.+.+..|+....  .+.|...++.
T Consensus       108 I~v~~~dG~~~~~-----------------------------l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d  158 (619)
T 3s94_A          108 IEVSNLDGSLRKV-----------------------------LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD  158 (619)
T ss_dssp             EEEEETTSCSCEE-----------------------------EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             EEEEECCCCCEEE-----------------------------EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence            7666653321110                             00011122234556666555555543  3567666665


Q ss_pred             CceeeEEEcCCcccEEEEEec--CCEEEEE-eCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEe-CCCcEEE
Q psy9182         263 SLQCIKVLTGHTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS-KDRSIAV  338 (486)
Q Consensus       263 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~-~dg~i~i  338 (486)
                      ...........-.....+++|  +..|+.+ ...+.|...|+..................+++.++.++.+. .++.|..
T Consensus       159 G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~  238 (619)
T 3s94_A          159 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILA  238 (619)
T ss_dssp             SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEE
T ss_pred             CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEE
Confidence            433333333233445667664  4555555 44578999988644332222211222245566666555544 5677888


Q ss_pred             EECCCCCceeeEEe--------eecCc---------------------------ccEEEEEeCC--------------C-
Q psy9182         339 WDMVSPNEITLRRV--------LVGHR---------------------------AAVNVVDFDE--------------K-  368 (486)
Q Consensus       339 ~d~~~~~~~~~~~~--------~~~~~---------------------------~~v~~~~~~~--------------~-  368 (486)
                      .|..+++.......        ..-|.                           ....|.+..|              . 
T Consensus       239 ~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~  318 (619)
T 3s94_A          239 CNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATE  318 (619)
T ss_dssp             EESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSE
T ss_pred             EECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCce
Confidence            88766543211100        00000                           0111212111              1 


Q ss_pred             EEEEEeCCCcEEEEECCCceEE-EEEc-CCcccEEEEEeC--CCE-EEEEeCCCcEEEEECCCCeeeEEecCcccCeEEE
Q psy9182         369 YIVSASGDRTIKVWNTSSCEFV-RTLN-GHKRGIACLQYR--DRL-VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI  443 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~~~~-~~~~-~~~~~v~~~~~~--~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  443 (486)
                      +|+.+ ..+.|+..++...... ..+. ..-..+..+.++  +.. +++-...+.|+.+++........+...-.....+
T Consensus       319 ~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~Gl  397 (619)
T 3s94_A          319 LLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGI  397 (619)
T ss_dssp             EEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred             EEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCce
Confidence            23322 2345666666543221 1111 112345677775  344 4444457889888887543333333333455566


Q ss_pred             Eec--CC-EEEEEeCCCcEEEEeCCCC
Q psy9182         444 RFD--AK-RIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       444 ~~~--~~-~l~s~~~dg~v~iwdl~~~  467 (486)
                      ++|  +. ..++-+..+.|.+.+++..
T Consensus       398 AvD~~~~~lY~tD~~~~~I~v~~~~G~  424 (619)
T 3s94_A          398 AVDWVARNLYWTDTGTDRIEVTRLNGT  424 (619)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             EEecccCcEEEEeCCCCcEEEEeCCCC
Confidence            663  44 4455456778988888755

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=96.27  E-value=0.61  Score=42.02  Aligned_cols=219  Identities=11%  Similarity=0.015  Sum_probs=114.4

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEEEc---CCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEe-ccc
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT---GHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTL-IHH  313 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~  313 (486)
                      .+.++++.+++++..|.|.. ....++--....   .+.+.+..+.+ ++..++.++.+|.|..- ...|+.-... ...
T Consensus        84 ~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~  161 (327)
T 2xbg_A           84 SVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEA  161 (327)
T ss_dssp             EEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSC
T ss_pred             EEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCC
Confidence            33344445555566665544 223333333322   23345666665 34444455556655332 2223322222 333


Q ss_pred             CccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         314 CEAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       314 ~~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      ...+..+.+.+ +.+++.+.+|.+..-+-..+......  .......+..+.+  ++. ++.++.+|.+++.+...++.-
T Consensus       162 ~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~-~~~~~~~G~~~~s~~D~G~tW  238 (327)
T 2xbg_A          162 IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGR-LWMIVNGGKIAFSDPDNSENW  238 (327)
T ss_dssp             CCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSC-EEEEETTTEEEEEETTEEEEE
T ss_pred             CcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCC-EEEEeCCceEEEecCCCCCee
Confidence            45677888864 35555556666554331112322221  1233456666666  444 445567788877753334433


Q ss_pred             EEEcC----CcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEe-cCCEEEEEeCCCcEE
Q psy9182         391 RTLNG----HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRF-DAKRIVSGAYDGKIK  460 (486)
Q Consensus       391 ~~~~~----~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~-~~~~l~s~~~dg~v~  460 (486)
                      ..+..    +...+..+.+.  +.+++ ++.+|.| .+....|+.-..+..   ....+.++.| ++..+++++.+|.|.
T Consensus       239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~  316 (327)
T 2xbg_A          239 GELLSPLRRNSVGFLDLAYRTPNEVWL-AGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILL  316 (327)
T ss_dssp             CCCBCTTSSCCSCEEEEEESSSSCEEE-EESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEE
T ss_pred             EeccCCcccCCcceEEEEecCCCEEEE-EeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEE
Confidence            33321    22347777774  44444 4557777 455555655554442   3456788888 677788888999887


Q ss_pred             EEeC
Q psy9182         461 VWNL  464 (486)
Q Consensus       461 iwdl  464 (486)
                      -++-
T Consensus       317 ~~~~  320 (327)
T 2xbg_A          317 RYVT  320 (327)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            7764

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=96.25  E-value=0.63  Score=41.94  Aligned_cols=175  Identities=9%  Similarity=0.009  Sum_probs=89.3

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEE-EcCCcccEEEEEe--cCCEEEEEeCCCcEEE-EEC--CCCcEEEEecccCcc
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKV-LTGHTGSVLCLQY--DERVIISGSSDSTVRV-WDV--NTGEMVNTLIHHCEA  316 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~i~v-wd~--~~~~~~~~~~~~~~~  316 (486)
                      ++..++ ++.+|.|..- ...++.-.. .......+..+.+  ++.+++++ .+|.+.. .|-  .+.+.+.  ......
T Consensus       132 ~~~~~~-~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~  206 (327)
T 2xbg_A          132 NGSAEM-ITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHN--RTTSRR  206 (327)
T ss_dssp             TTEEEE-EETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEE-TTSSEEEEECTTCSSCEEEE--CCSSSC
T ss_pred             CCCEEE-EeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEE-CCCcEEEEeCCCCCceeECC--CCCCCc
Confidence            444444 4456654332 222332222 2344556777777  45566555 4555544 342  2223332  233456


Q ss_pred             EEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEee-ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         317 VLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVL-VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       317 i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      +..+.+.+ +.+++++.+|.+++.+...++........ ......+..+.+  ++..++ ++.++.| .+..+.++.-..
T Consensus       207 ~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~-~g~~g~i-~~S~DgG~tW~~  284 (327)
T 2xbg_A          207 LHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWL-AGGAGAL-LCSQDGGQTWQQ  284 (327)
T ss_dssp             EEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEE-EESTTCE-EEESSTTSSCEE
T ss_pred             cceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEE-EeCCCeE-EEeCCCCcccEE
Confidence            77777754 46777778888777642222221111110 012234677777  344444 4456766 344555554444


Q ss_pred             EcC---CcccEEEEEe-CCCEEEEEeCCCcEEEEEC
Q psy9182         393 LNG---HKRGIACLQY-RDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       393 ~~~---~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~  424 (486)
                      +..   ....+..+.+ ++..+++++.+|.|.-++-
T Consensus       285 ~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          285 DVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT  320 (327)
T ss_dssp             CGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred             cCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence            432   2345566666 4666778888998776653

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=96.18  E-value=0.32  Score=42.78  Aligned_cols=186  Identities=12%  Similarity=0.085  Sum_probs=108.4

Q ss_pred             cEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeec
Q psy9182         276 SVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG  355 (486)
Q Consensus       276 ~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  355 (486)
                      .|..++......+.-. ||.|+.|-....-.+..-......|..++......++-. ||.|+.|-......+..   ...
T Consensus        25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~---P~~   99 (282)
T 3qhy_B           25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV---PAE   99 (282)
T ss_dssp             SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC---CGG
T ss_pred             CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC---Ccc
Confidence            4667777544444445 899999976532211111112345777777666444445 99999997654332211   111


Q ss_pred             CcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC
Q psy9182         356 HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       356 ~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  435 (486)
                      -...|..++....+.+.-. +|.|+.|-....-.+..-......|..++......+.-. ||.|..|-....-.+..-..
T Consensus       100 ~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~  177 (282)
T 3qhy_B          100 ARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAE  177 (282)
T ss_dssp             GSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGG
T ss_pred             cCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCcee
Confidence            1346777887666666666 999999976542211111122345777777655555555 89999997654222211111


Q ss_pred             cccCeEEEEecC-CEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         436 HEELVRCIRFDA-KRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       436 h~~~v~~~~~~~-~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      -...|..|+.-. ..++.  .||.|..|--....+.
T Consensus       178 ~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gql  211 (282)
T 3qhy_B          178 AQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQT  211 (282)
T ss_dssp             GGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTT
T ss_pred             cCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCC
Confidence            235688888844 44554  5999999987654433

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.08  E-value=0.3  Score=49.32  Aligned_cols=188  Identities=11%  Similarity=0.090  Sum_probs=103.9

Q ss_pred             eCCCEEEEEecC----CeEEEEECCCceeeEEE-c-------CCcccEEEEEe--cCCEEEEEeCC------CcEEEEEC
Q psy9182         242 YDDHKIVSGLRD----NTIKVWDRVSLQCIKVL-T-------GHTGSVLCLQY--DERVIISGSSD------STVRVWDV  301 (486)
Q Consensus       242 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~-------~~~~~v~~~~~--~~~~l~~~~~d------g~i~vwd~  301 (486)
                      .++..++.|+.+    ..+.+||..+++-...- .       .....-.+...  ++..++.|+.+      ..+.+||.
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            677888888754    46889998776533322 1       11112244555  77777777754      35889999


Q ss_pred             CCCcEEEE--ecccCccEEEEEE-cCCeEEEEeCCC--cEEEEECCCCCceeeEE--eeecCcccEEEEEeC---CCEEE
Q psy9182         302 NTGEMVNT--LIHHCEAVLHLRF-SNGMMVTCSKDR--SIAVWDMVSPNEITLRR--VLVGHRAAVNVVDFD---EKYIV  371 (486)
Q Consensus       302 ~~~~~~~~--~~~~~~~i~~~~~-~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~--~~~~~~~~v~~~~~~---~~~l~  371 (486)
                      .+.+....  +......-..+.+ .+..++.|+.++  .+.+||..+..-.....  ..........++.++   +..++
T Consensus       476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv  555 (695)
T 2zwa_A          476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII  555 (695)
T ss_dssp             TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred             CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence            87654322  1111222233343 445666776544  68999988754221110  011111222223433   55666


Q ss_pred             EEeC--C-----CcEEEEECCCce------EE--EEEc-CCcccEEEEEeC-CCEEEEEeC--------CCcEEEEECCC
Q psy9182         372 SASG--D-----RTIKVWNTSSCE------FV--RTLN-GHKRGIACLQYR-DRLVVSGSS--------DNTIRLWDIEC  426 (486)
Q Consensus       372 ~~~~--d-----~~i~iwd~~~~~------~~--~~~~-~~~~~v~~~~~~-~~~l~~~~~--------dg~v~iwd~~~  426 (486)
                      .|+.  +     ..+.+||+.+.+      -.  .... .......++..+ +.+++.|+.        ...|.+||+.+
T Consensus       556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t  635 (695)
T 2zwa_A          556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS  635 (695)
T ss_dssp             ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred             ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence            6664  2     458899988766      11  1111 112233455566 788888874        35699999987


Q ss_pred             Cee
Q psy9182         427 GAC  429 (486)
Q Consensus       427 ~~~  429 (486)
                      .+-
T Consensus       636 ~~W  638 (695)
T 2zwa_A          636 ETL  638 (695)
T ss_dssp             TEE
T ss_pred             CeE
Confidence            653

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.08  E-value=1.3  Score=44.00  Aligned_cols=191  Identities=10%  Similarity=-0.000  Sum_probs=110.2

Q ss_pred             EEEEeCCCEEE-EEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         238 YCLQYDDHKIV-SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       238 ~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +.+.+.+..++ +-..++.|..+++........+.........+++  .+ ++.++-...+.|.+.++........+...
T Consensus        42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~  121 (628)
T 4a0p_A           42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKD  121 (628)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSS
T ss_pred             EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCC
Confidence            44555455554 4456788988887765444444322223344444  34 45555555688999998754433333333


Q ss_pred             CccEEEEEEcC--CeEEEEeC--CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCC
Q psy9182         314 CEAVLHLRFSN--GMMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSS  386 (486)
Q Consensus       314 ~~~i~~~~~~~--~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~  386 (486)
                      -.....+++++  +.|+....  .+.|...++.........    ..-.....+++  +++.|+.+ ...+.|...|+..
T Consensus       122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~----~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG  197 (628)
T 4a0p_A          122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV----PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG  197 (628)
T ss_dssp             CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE----CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE----CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence            45567888875  46665553  567888887655432211    23344556666  45555555 4567899999875


Q ss_pred             ceEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEe
Q psy9182         387 CEFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       387 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~  433 (486)
                      ... ..+.........++.++..|..+. ..+.|...|..+|+....+
T Consensus       198 ~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l  244 (628)
T 4a0p_A          198 LNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTII  244 (628)
T ss_dssp             CSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             Cce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEE
Confidence            433 333333334456666555555444 5788999998777654444

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=96.03  E-value=0.64  Score=40.03  Aligned_cols=192  Identities=9%  Similarity=0.188  Sum_probs=114.1

Q ss_pred             EEcCCcccEEEEEec--CC-EEEEEeCCCcEEEEECCCCcEEEEecc-cCccEEEEEEcC-CeEEEE-eCCCcEEEEECC
Q psy9182         269 VLTGHTGSVLCLQYD--ER-VIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFSN-GMMVTC-SKDRSIAVWDMV  342 (486)
Q Consensus       269 ~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~i~~~~~~~-~~l~~~-~~dg~i~i~d~~  342 (486)
                      .+.+-...+..++++  ++ ++++...++.|...|.. ++.++.+.. .....-.+++.+ +.+++. -.++.+.++++.
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            344555678888884  44 55557778899999998 888877743 224566677754 344444 466788999887


Q ss_pred             CCCceeeEEee------ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC---CceEEEEEc-------CCcccEEEEE
Q psy9182         343 SPNEITLRRVL------VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS---SCEFVRTLN-------GHKRGIACLQ  404 (486)
Q Consensus       343 ~~~~~~~~~~~------~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~-------~~~~~v~~~~  404 (486)
                      ....+......      .........+++  .++.|+++.......+|.+.   ....+..+.       .+......++
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence            65532111111      112334567777  45566666655444555443   111122221       1223456677


Q ss_pred             eC---CCEEEEEeCCCcEEEEECCCCeeeEEecCcc---------cCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         405 YR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHE---------ELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       405 ~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~---------~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ++   +++++.....+.|.++|.. |+.+..+.-..         ..--.|+|  +|+ |...++-+.++.+.
T Consensus       180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~  250 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFT  250 (255)
T ss_dssp             EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEE
T ss_pred             EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEE
Confidence            75   6677777888899999976 66665553221         24568888  665 55557777666654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.00  E-value=1.1  Score=42.30  Aligned_cols=223  Identities=10%  Similarity=0.083  Sum_probs=113.6

Q ss_pred             eEEEEeC--CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC-----cEEEEECCCCcE-
Q psy9182         237 VYCLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS-----TVRVWDVNTGEM-  306 (486)
Q Consensus       237 v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg-----~i~vwd~~~~~~-  306 (486)
                      -+++.++  +..|+.+...+.|+.+|..+++...... .......+++  +++ |+.+...+     .+...+...+.. 
T Consensus       143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~  220 (433)
T 4hw6_A          143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTE  220 (433)
T ss_dssp             EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred             eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeec
Confidence            3455553  4566666555899999998877655443 3445667777  667 44444321     133333322111 


Q ss_pred             EEEecccCccEEEEEEcC--CeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEE
Q psy9182         307 VNTLIHHCEAVLHLRFSN--GMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIK  380 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~--~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~  380 (486)
                      ...+. .......+++++  +.|+++ ..++.|+.+|..++......... +....-..+++  ++++|+.+ ...+.|+
T Consensus       221 ~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~  298 (433)
T 4hw6_A          221 RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIY  298 (433)
T ss_dssp             EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-SCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred             ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-CCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence            01111 122234455554  355544 45678999998766542111111 11122223555  77755554 4567899


Q ss_pred             EEECC--CceE--EEEEcCC---------------cccEEEEEe---------C--CCEEEEEeCCCcEEEEECCCCeee
Q psy9182         381 VWNTS--SCEF--VRTLNGH---------------KRGIACLQY---------R--DRLVVSGSSDNTIRLWDIECGACL  430 (486)
Q Consensus       381 iwd~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~--~~~l~~~~~dg~v~iwd~~~~~~~  430 (486)
                      .++..  ++..  ...+.+.               -.....+++         +  +++.++-...+.|+.++. +|...
T Consensus       299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~  377 (433)
T 4hw6_A          299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT  377 (433)
T ss_dssp             EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred             EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence            98765  2321  1122111               112344555         3  455555556788999985 46443


Q ss_pred             EEecCc------------------ccCeEEEEec--CCEEEEE-eCCCcEEEEeCC
Q psy9182         431 RVLEGH------------------EELVRCIRFD--AKRIVSG-AYDGKIKVWNLV  465 (486)
Q Consensus       431 ~~~~~h------------------~~~v~~~~~~--~~~l~s~-~~dg~v~iwdl~  465 (486)
                       .+.+.                  -.....|+++  ...|+.+ ...+.|+.++++
T Consensus       378 -t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          378 -TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             -EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             -EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence             33221                  0125667774  3344444 345677777654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=95.73  E-value=1.1  Score=40.14  Aligned_cols=189  Identities=13%  Similarity=0.128  Sum_probs=107.2

Q ss_pred             cEEEEEec--CCEEEEEe-CCCcEEEEECCCCcEEEEeccc-------CccEEEEEE---cC-CeEEEEeC---------
Q psy9182         276 SVLCLQYD--ERVIISGS-SDSTVRVWDVNTGEMVNTLIHH-------CEAVLHLRF---SN-GMMVTCSK---------  332 (486)
Q Consensus       276 ~v~~~~~~--~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~-------~~~i~~~~~---~~-~~l~~~~~---------  332 (486)
                      .-.+..|+  ...+..++ ..|+|..||...+.........       ...+..+.+   .+ +.|++...         
T Consensus        14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g   93 (334)
T 2p9w_A           14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD   93 (334)
T ss_dssp             CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred             CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence            34567774  24555554 7899999999866544332211       113578888   33 44444332         


Q ss_pred             -----CCcEEEEECC---CCCceeeEEeee---c-------CcccEEEEEe--CCCEEEEEeCC-CcEEEEECCCceEEE
Q psy9182         333 -----DRSIAVWDMV---SPNEITLRRVLV---G-------HRAAVNVVDF--DEKYIVSASGD-RTIKVWNTSSCEFVR  391 (486)
Q Consensus       333 -----dg~i~i~d~~---~~~~~~~~~~~~---~-------~~~~v~~~~~--~~~~l~~~~~d-~~i~iwd~~~~~~~~  391 (486)
                           +..|..||+.   +++.........   +       .......+..  +|+..++++.. +.|...+.... .+.
T Consensus        94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~  172 (334)
T 2p9w_A           94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS  172 (334)
T ss_dssp             CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred             cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence                 6789999998   665543222100   1       1123556666  78888888887 88888886643 233


Q ss_pred             EEc--C----CcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCee--eEEe-cCc------ccCeEEEEecCCE-EEEE
Q psy9182         392 TLN--G----HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC--LRVL-EGH------EELVRCIRFDAKR-IVSG  453 (486)
Q Consensus       392 ~~~--~----~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~--~~~~-~~h------~~~v~~~~~~~~~-l~s~  453 (486)
                      .+.  .    .....+.+.+  +++.|++...+|.+..+|+.+...  +..- .+.      ...+..+..+|+. |++.
T Consensus       173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~  252 (334)
T 2p9w_A          173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA  252 (334)
T ss_dssp             EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred             eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence            221  1    1112345555  588888887799999999885332  2111 021      1222223347877 5555


Q ss_pred             eCCCcEEEEeCC
Q psy9182         454 AYDGKIKVWNLV  465 (486)
Q Consensus       454 ~~dg~v~iwdl~  465 (486)
                      +..+.+.+.+-+
T Consensus       253 ~~~~~~~l~S~D  264 (334)
T 2p9w_A          253 RAPYAISFRSWD  264 (334)
T ss_dssp             ETTEEEEEECSS
T ss_pred             CCCCEEEEECCC
Confidence            566666665544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=95.66  E-value=0.93  Score=39.00  Aligned_cols=185  Identities=12%  Similarity=0.139  Sum_probs=105.9

Q ss_pred             EEEEeCCCE-EEEEecCCeEEEEECCCceeeEEEcC-CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE---EEEe
Q psy9182         238 YCLQYDDHK-IVSGLRDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM---VNTL  310 (486)
Q Consensus       238 ~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~---~~~~  310 (486)
                      +++.++++. +++...++.|...|.. ++.++.+.- -....-.+++  ++.++++.-.++.+.++++.....   +...
T Consensus        32 la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~  110 (255)
T 3qqz_A           32 LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKI  110 (255)
T ss_dssp             EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred             eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence            445555554 5557788899999988 888877642 1234566666  455555555677899998765432   2222


Q ss_pred             c------ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCC---CCceeeEEe--e--ecCcccEEEEEe---CCCEEEE
Q psy9182         311 I------HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVS---PNEITLRRV--L--VGHRAAVNVVDF---DEKYIVS  372 (486)
Q Consensus       311 ~------~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~---~~~~~~~~~--~--~~~~~~v~~~~~---~~~~l~~  372 (486)
                      .      ........+++++.  .|+++.......+|.+..   .........  +  ..+.....++++   .+++++.
T Consensus       111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL  190 (255)
T 3qqz_A          111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVL  190 (255)
T ss_dssp             ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred             ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEE
Confidence            1      12334578888754  677666655555555541   111111110  0  011223455666   5667777


Q ss_pred             EeCCCcEEEEECCCceEEEEEcCCc---------ccEEEEEeC--CCEEEEEeCCCcEEEEECC
Q psy9182         373 ASGDRTIKVWNTSSCEFVRTLNGHK---------RGIACLQYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       373 ~~~d~~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      ...+..|..+|.. ++.+..+.-..         ..--.++++  |+ |...++.+.+++|.-.
T Consensus       191 S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~~  252 (255)
T 3qqz_A          191 SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTPQ  252 (255)
T ss_dssp             ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC-
T ss_pred             ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEec
Confidence            7788889999966 55655554221         133556664  66 4444777777776543

>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}

Probab=95.63  E-value=1.4  Score=40.83  Aligned_cols=231  Identities=11%  Similarity=0.132  Sum_probs=134.3

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCc-----------eeeEEEcC-CcccE--EEEEecCCEEEEEeCCCcEEEEECC
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSL-----------QCIKVLTG-HTGSV--LCLQYDERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~~-~~~~v--~~~~~~~~~l~~~~~dg~i~vwd~~  302 (486)
                      +..++......++-..||.|..|-....           .....+.. ....+  ..++......++-..||.|+.|-..
T Consensus        55 i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n  134 (389)
T 3kci_A           55 PVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA  134 (389)
T ss_dssp             EEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECC
T ss_pred             eEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCC
Confidence            4445556667777788999999953321           11111221 11223  3444456677777889999999643


Q ss_pred             CC-----------cEEEEecc-cCccEEEEEEcCCeEEEEeCCCcEEEEECCCC---------CceeeEEeeecCcccEE
Q psy9182         303 TG-----------EMVNTLIH-HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSP---------NEITLRRVLVGHRAAVN  361 (486)
Q Consensus       303 ~~-----------~~~~~~~~-~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~~~v~  361 (486)
                      ..           .....+.. ....|..++......++...+|.|+.|-....         ...............+.
T Consensus       135 ~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~  214 (389)
T 3kci_A          135 EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV  214 (389)
T ss_dssp             GGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEE
T ss_pred             CCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEE
Confidence            21           11112221 22368888888888888889999999965321         11111111111233566


Q ss_pred             EEEeC--CCEEEEEeCCCcEEEEECCCc-----------eEEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182         362 VVDFD--EKYIVSASGDRTIKVWNTSSC-----------EFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       362 ~~~~~--~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                      .++..  ..+.+.-..||.|+.|-....           .....+.. ....|..++......++-..||.|+.|=....
T Consensus       215 ~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~  294 (389)
T 3kci_A          215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY  294 (389)
T ss_dssp             EEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGG
T ss_pred             EEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCC
Confidence            66653  366677778999999964321           11122222 22357777777777777789999999975321


Q ss_pred             -----------eeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         428 -----------ACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       428 -----------~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                                 .....+.. ....|..|+.-....+....||.|..|-....
T Consensus       295 GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~~  346 (389)
T 3kci_A          295 HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE  346 (389)
T ss_dssp             GTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCTT
T ss_pred             CCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCCC
Confidence                       01112221 12357888885566666688999999987653

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.47  E-value=0.83  Score=46.10  Aligned_cols=185  Identities=10%  Similarity=0.088  Sum_probs=104.0

Q ss_pred             ecCCEEEEEeCC----CcEEEEECCCCcEEEEe-c-------ccCccEEEEEE--cCCeEEEEeCC------CcEEEEEC
Q psy9182         282 YDERVIISGSSD----STVRVWDVNTGEMVNTL-I-------HHCEAVLHLRF--SNGMMVTCSKD------RSIAVWDM  341 (486)
Q Consensus       282 ~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~-~-------~~~~~i~~~~~--~~~~l~~~~~d------g~i~i~d~  341 (486)
                      .++..++.|+.+    ..+.+||..+++....- .       .....-..+.+  .+..++.|+.+      ..+.+||.
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            577788888753    46889999887654332 1       11122344445  34456666543      35788998


Q ss_pred             CCCCceeeEEeeecCcccEEEEEe-CCCEEEEEeCCC--cEEEEECCCceEEEEE-----cCCcccEEEEEeC---CCEE
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDR--TIKVWNTSSCEFVRTL-----NGHKRGIACLQYR---DRLV  410 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~--~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~---~~~l  410 (486)
                      .+..-.. ..........-.++.+ ++..++.|+.++  .+.+||..+.+-...-     ........++.++   +.++
T Consensus       476 ~t~~W~~-~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy  554 (695)
T 2zwa_A          476 KTREWSM-IKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI  554 (695)
T ss_dssp             TTTEEEE-CCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred             CCCcEEE-CCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence            7753221 1112222333344554 788888887654  6999999886543221     1111122334444   5677


Q ss_pred             EEEeC--C-----CcEEEEECCCCee-----eEEec----CcccCeEEEEec-CCEEEEEeCC--------CcEEEEeCC
Q psy9182         411 VSGSS--D-----NTIRLWDIECGAC-----LRVLE----GHEELVRCIRFD-AKRIVSGAYD--------GKIKVWNLV  465 (486)
Q Consensus       411 ~~~~~--d-----g~v~iwd~~~~~~-----~~~~~----~h~~~v~~~~~~-~~~l~s~~~d--------g~v~iwdl~  465 (486)
                      +.|+.  +     +.+.+||+.+.+-     -..+.    .......++.++ +..++.||.+        ..|.+||+.
T Consensus       555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~  634 (695)
T 2zwa_A          555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL  634 (695)
T ss_dssp             EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred             EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence            77765  2     4588999987661     11221    111233445556 7878888743        458899987


Q ss_pred             CC
Q psy9182         466 AA  467 (486)
Q Consensus       466 ~~  467 (486)
                      +.
T Consensus       635 t~  636 (695)
T 2zwa_A          635 SE  636 (695)
T ss_dssp             TT
T ss_pred             CC
Confidence            64

>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}

Probab=95.45  E-value=1.7  Score=40.72  Aligned_cols=231  Identities=9%  Similarity=0.047  Sum_probs=139.7

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCC-ce------------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEEC-
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVS-LQ------------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV-  301 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~-  301 (486)
                      .+..++..+...++-..||.|+.|-... ++            ....+. ....|..++......++-..||.|+.|-. 
T Consensus        76 ~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~G~~hs~al~~~G~v~~wG~~  154 (423)
T 3mvd_K           76 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISAGDSHSACLLEDGRVFAWGSF  154 (423)
T ss_dssp             SEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEECSSEEEEEETTSCEEEEECE
T ss_pred             CceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEcCcCeEEEEeCCCeEEEEeCC
Confidence            3567777778888888999999995432 10            011111 23467788886677777788999999975 


Q ss_pred             -C-CCcE---------EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc--------------------eeeE
Q psy9182         302 -N-TGEM---------VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE--------------------ITLR  350 (486)
Q Consensus       302 -~-~~~~---------~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------------------~~~~  350 (486)
                       . .+++         ..........|..++......++-..+|.|+.|-......                    ....
T Consensus       155 ~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~  234 (423)
T 3mvd_K          155 RDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPT  234 (423)
T ss_dssp             ECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCE
T ss_pred             CCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCe
Confidence             2 2221         1111223456888888788888888999999996432111                    0111


Q ss_pred             EeeecCcccEEEEEeCCCEEEEE-eCCCcEEEEECCC-----------ceEEEEEcCCcccEEEEEeCCCEEEEEeCCCc
Q psy9182         351 RVLVGHRAAVNVVDFDEKYIVSA-SGDRTIKVWNTSS-----------CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT  418 (486)
Q Consensus       351 ~~~~~~~~~v~~~~~~~~~l~~~-~~d~~i~iwd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  418 (486)
                      .........|..+.......+.. ..++.|+.|-...           .............|..++......+.-..||.
T Consensus       235 ~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~ht~alt~~G~  314 (423)
T 3mvd_K          235 QLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLK  314 (423)
T ss_dssp             EECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSSEEEEEETTCC
T ss_pred             EEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccCeEEEEeCCCc
Confidence            11122233455665544443333 6889999996432           11111111124567788887777778889999


Q ss_pred             EEEEECCCC------------eeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         419 IRLWDIECG------------ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       419 v~iwd~~~~------------~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      |+.|=....            .....+..-...|..|+.-...-+.-..||.|+.|=....
T Consensus       315 v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~  375 (423)
T 3mvd_K          315 CSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVN  375 (423)
T ss_dssp             EEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCTT
T ss_pred             EEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCC
Confidence            999965321            1122233333368888885555555578999999986553

>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A

Probab=95.20  E-value=2  Score=40.00  Aligned_cols=233  Identities=10%  Similarity=0.143  Sum_probs=140.1

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCC-c----------eeeEEEcC-CcccEEEEEecCCEEEEEeCC-CcEEEEE
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVS-L----------QCIKVLTG-HTGSVLCLQYDERVIISGSSD-STVRVWD  300 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d-g~i~vwd  300 (486)
                      ...+..++......++-..+|.|+.|-... +          .....+.. ....|..++....+.++-..+ +.|+.|-
T Consensus        15 ~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG   94 (406)
T 4d9s_A           15 PRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWG   94 (406)
T ss_dssp             CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEE
T ss_pred             ccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEc
Confidence            345667777777878888899999995432 1          11112221 223678888765555555555 5899995


Q ss_pred             CCCC---------cEE--EEec-ccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc---------eeeEEeeecCccc
Q psy9182         301 VNTG---------EMV--NTLI-HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE---------ITLRRVLVGHRAA  359 (486)
Q Consensus       301 ~~~~---------~~~--~~~~-~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~  359 (486)
                      ....         ...  ..+. .....|..++......++-..+|.|+.|-......         .............
T Consensus        95 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~  174 (406)
T 4d9s_A           95 WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR  174 (406)
T ss_dssp             CCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCC
T ss_pred             CCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCc
Confidence            4321         111  1111 12336888888788888889999999997543211         1111111112236


Q ss_pred             EEEEEeCCCEEEEEeCCCcEEEEECCCc----------e-EEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182         360 VNVVDFDEKYIVSASGDRTIKVWNTSSC----------E-FVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       360 v~~~~~~~~~l~~~~~d~~i~iwd~~~~----------~-~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                      |..++....+.+.-..+|.|+.|-....          . ....+.. ....+..++......+.-..+|.|+.|-....
T Consensus       175 i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~  254 (406)
T 4d9s_A          175 IKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKY  254 (406)
T ss_dssp             EEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEECCTT
T ss_pred             EEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeCCCC
Confidence            7777777777777789999999964321          1 1111221 22467777777777778889999999975321


Q ss_pred             e-----------eeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEeCCC
Q psy9182         428 A-----------CLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       428 ~-----------~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      -           ....+.. ....|..|+.-....+.-..||.|..|--..
T Consensus       255 GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~  305 (406)
T 4d9s_A          255 GQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNK  305 (406)
T ss_dssp             STTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred             CCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCC
Confidence            1           1111211 1235778887656666667899999997654

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=94.85  E-value=2.5  Score=39.28  Aligned_cols=209  Identities=8%  Similarity=0.144  Sum_probs=124.8

Q ss_pred             CCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEe
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS  331 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~  331 (486)
                      +..|.|.|+.++..+....- ...---+.+..+.++.-. ..++.++|+++.+.+..+.... .|....|- ++.++.. 
T Consensus        47 ~~~vvIiDl~~~~~~~rrpi-~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-  122 (494)
T 1bpo_A           47 QAQVVIIDMNDPSNPIRRPI-SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-  122 (494)
T ss_dssp             CCEEEEEETTSTTSCEEEEC-CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-
T ss_pred             CCeEEEEECCCCCcceeccc-ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-
Confidence            34789999887554432211 111111233444444443 6789999999999998887754 46566664 5555554 


Q ss_pred             CCCcEEEEECCCCCceeeEEeeecC----cccEEEEEe--CCCEEEEEe-------CCCcEEEEECCCceEEEEEcCCcc
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLVGH----RAAVNVVDF--DEKYIVSAS-------GDRTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      .+..|+-|++.....+.  +.+..|    ...|.....  +.++++..+       -.|.+.+|..+. +.-+.+++|..
T Consensus       123 T~taVyHWsi~~~s~P~--kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa  199 (494)
T 1bpo_A          123 TDNAVYHWSMEGESQPV--KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA  199 (494)
T ss_dssp             CSSEEEEEESSSSCCCE--EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEE
T ss_pred             cCCeeEEecccCCCCch--hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeee
Confidence            46689999997643322  333322    234444443  566665443       246788999875 44677888887


Q ss_pred             cEEEEEeCCC-----EEEEEeC---CCcEEEEECCCC---e-----eeEEe-c---CcccCeEEEEe--cCCEEEEEeCC
Q psy9182         399 GIACLQYRDR-----LVVSGSS---DNTIRLWDIECG---A-----CLRVL-E---GHEELVRCIRF--DAKRIVSGAYD  456 (486)
Q Consensus       399 ~v~~~~~~~~-----~l~~~~~---dg~v~iwd~~~~---~-----~~~~~-~---~h~~~v~~~~~--~~~~l~s~~~d  456 (486)
                      .-..+..+|+     +++.+..   .+.++|-++...   .     ....+ .   ...+-..++..  .-..+..-..-
T Consensus       200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~  279 (494)
T 1bpo_A          200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY  279 (494)
T ss_dssp             EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETT
T ss_pred             eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecC
Confidence            7777776542     3444443   278899888432   1     11111 1   11233345555  33447777889


Q ss_pred             CcEEEEeCCCCC
Q psy9182         457 GKIKVWNLVAAL  468 (486)
Q Consensus       457 g~v~iwdl~~~~  468 (486)
                      |.|++||+.++.
T Consensus       280 G~i~lyDleTgt  291 (494)
T 1bpo_A          280 GYIHLYDLETGT  291 (494)
T ss_dssp             SEEEEEETTTCC
T ss_pred             ceEEEEecccce
Confidence            999999999764

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.54  E-value=4.1  Score=40.40  Aligned_cols=92  Identities=12%  Similarity=0.114  Sum_probs=48.0

Q ss_pred             CCCcEEEEECCCceEEEEEcC------CcccEEEEEeC---CCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEE
Q psy9182         375 GDRTIKVWNTSSCEFVRTLNG------HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIR  444 (486)
Q Consensus       375 ~d~~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~---~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~  444 (486)
                      ..+.|+.++.........+..      .......++++   +++.++-+..+.|.+.++. |+....+ ........+|+
T Consensus       360 ~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~ia  438 (628)
T 4a0p_A          360 RQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVV  438 (628)
T ss_dssp             TTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEE
T ss_pred             CcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEE
Confidence            345566666543222222221      12245566664   3455666678899999986 5544443 33445678888


Q ss_pred             ecC--CE-EEEEeCCC--cEEEEeCCCC
Q psy9182         445 FDA--KR-IVSGAYDG--KIKVWNLVAA  467 (486)
Q Consensus       445 ~~~--~~-l~s~~~dg--~v~iwdl~~~  467 (486)
                      +++  .+ +++-....  .|...+++..
T Consensus       439 vdp~~g~ly~tD~g~~~~~I~r~~~dG~  466 (628)
T 4a0p_A          439 VNPEKGYMYFTNLQERSPKIERAALDGT  466 (628)
T ss_dssp             EETTTTEEEEEEEETTEEEEEEEETTSC
T ss_pred             EecCCCeEEEeecCCCCCeEEEEeCCCC
Confidence            842  33 33332222  4555555543

>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}

Probab=94.18  E-value=3.5  Score=38.10  Aligned_cols=191  Identities=9%  Similarity=0.151  Sum_probs=113.8

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEECCC-----------ceeeEEEcC-CcccEEEEEecCCEEEEEeCCCcEEEEECCC
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDRVS-----------LQCIKVLTG-HTGSVLCLQYDERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~-----------~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      .+..++......++-..||.|+.|-...           ......+.. ....|..++......++-..+|.|+.|-...
T Consensus       108 ~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~  187 (389)
T 3kci_A          108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGR  187 (389)
T ss_dssp             EEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCG
T ss_pred             eEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCCC
Confidence            3445555666777778899999995422           111122221 2236788888777777788899999996532


Q ss_pred             -C--------cE--EEEec-ccCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCc---------eeeEEeeecCcccE
Q psy9182         304 -G--------EM--VNTLI-HHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNE---------ITLRRVLVGHRAAV  360 (486)
Q Consensus       304 -~--------~~--~~~~~-~~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~v  360 (486)
                       +        ..  ...+. .....+..++...  ...++-..+|.|+.|-......         .............|
T Consensus       188 ~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v  267 (389)
T 3kci_A          188 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV  267 (389)
T ss_dssp             GGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCE
T ss_pred             CCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcE
Confidence             1        11  11111 1234577777653  5677778899999996432110         11111111122346


Q ss_pred             EEEEeCCCEEEEEeCCCcEEEEECCCc-----------eEEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         361 NVVDFDEKYIVSASGDRTIKVWNTSSC-----------EFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       361 ~~~~~~~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~  426 (486)
                      ..++....+.++-..+|.|+.|-....           .....+.. ....|..++......++-..||.|+.|=...
T Consensus       268 ~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n~  345 (389)
T 3kci_A          268 VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND  345 (389)
T ss_dssp             EEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred             EEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence            777776677677788999999975321           11122222 2245778887777777778999999997653

>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}

Probab=93.75  E-value=4.8  Score=38.29  Aligned_cols=232  Identities=10%  Similarity=0.076  Sum_probs=140.6

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCCce----------------------------------eeEEEcC-------
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ----------------------------------CIKVLTG-------  272 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------------------------------~~~~~~~-------  272 (486)
                      ...+..++..+...++-..+|.|+.|-....-                                  ....+..       
T Consensus        66 ~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~  145 (473)
T 3of7_A           66 EAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA  145 (473)
T ss_dssp             TTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHH
T ss_pred             CCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCccc
Confidence            34677777778888888889999999542210                                  0011111       


Q ss_pred             CcccEEEEEecCCEEEEEeCCCcEEEEECC---CCcE------------EEEec-ccCccEEEEEEcCCeEEEEeCCCcE
Q psy9182         273 HTGSVLCLQYDERVIISGSSDSTVRVWDVN---TGEM------------VNTLI-HHCEAVLHLRFSNGMMVTCSKDRSI  336 (486)
Q Consensus       273 ~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~------------~~~~~-~~~~~i~~~~~~~~~l~~~~~dg~i  336 (486)
                      ....|..++......++-..+|.|+.|-..   .+++            ...+. .....|..++......++-..+|.|
T Consensus       146 ~~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v  225 (473)
T 3of7_A          146 EGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMV  225 (473)
T ss_dssp             TTCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCE
T ss_pred             CCCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeE
Confidence            125677888877777777889999999751   1111            11111 1123488888888888888899999


Q ss_pred             EEEECCCCCceee----------EEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-c-----------eE---EE
Q psy9182         337 AVWDMVSPNEITL----------RRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS-C-----------EF---VR  391 (486)
Q Consensus       337 ~i~d~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~-----------~~---~~  391 (486)
                      +.|-......+-.          .....-....|..++......++-..+|.|+.|-... +           ..   ..
T Consensus       226 ~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~  305 (473)
T 3of7_A          226 FAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPK  305 (473)
T ss_dssp             EEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEE
T ss_pred             EEEeCCCCCCCCCCccccccccccCceecCCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccc
Confidence            9996543211100          0000001145777777777777777899999996432 1           11   11


Q ss_pred             EEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCC-Ce-------------------e-----eEEecCcccCeEEEEe
Q psy9182         392 TLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIEC-GA-------------------C-----LRVLEGHEELVRCIRF  445 (486)
Q Consensus       392 ~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~-~~-------------------~-----~~~~~~h~~~v~~~~~  445 (486)
                      .+.. ....|..++......++-..||.|+.|=... ++                   .     ...+. ....|..|+.
T Consensus       306 ~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~-~~~~v~~Ia~  384 (473)
T 3of7_A          306 RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLN-NVPKFKSVAA  384 (473)
T ss_dssp             ECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECC-SSCCEEEEEE
T ss_pred             cccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccC-CCCceEEEEe
Confidence            1121 2245777887777777778899999996532 11                   0     01111 1126778888


Q ss_pred             cCCEEEEEeCCCcEEEEeCCC
Q psy9182         446 DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       446 ~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      -....+.-..||.|..|-...
T Consensus       385 G~~hs~al~~~G~vy~wG~n~  405 (473)
T 3of7_A          385 GSHHSVAVAQNGIAYSWGFGE  405 (473)
T ss_dssp             CSSEEEEEETTSCEEEEECCT
T ss_pred             CCCeEEEEeCCCcEEEeeCCC
Confidence            666666667899999998654

>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B

Probab=93.59  E-value=4.7  Score=37.57  Aligned_cols=229  Identities=10%  Similarity=0.090  Sum_probs=141.0

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCc-e------------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEEC
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSL-Q------------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV  301 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~-~------------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~  301 (486)
                      ..+..++......++-..||.|+.|-.... +            ....+. -...|..++......++-..||.|+.|-.
T Consensus        59 ~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-l~~~i~~va~G~~hs~alt~~G~v~~wG~  137 (413)
T 1a12_A           59 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQEKVVQVSAGDSHTAALTDDGRVFLWGS  137 (413)
T ss_dssp             SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECC-CCSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred             CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEec-CCCcEEEEecCCCeEEEEcCCCcEEEeeC
Confidence            456667777777777888999999964321 0            011111 13467888887777777788999999974


Q ss_pred             --CC-CcE-----------EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCce--------------------
Q psy9182         302 --NT-GEM-----------VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEI--------------------  347 (486)
Q Consensus       302 --~~-~~~-----------~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------------------  347 (486)
                        .. +++           ...+ .....|..++......++-..+|.|+.|=......+                    
T Consensus       138 ~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~  216 (413)
T 1a12_A          138 FRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL  216 (413)
T ss_dssp             EEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHH
T ss_pred             CcCCCCccCcCCccccccCCEEe-cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccccccccc
Confidence              21 111           1111 234567788877778888889999999975432111                    


Q ss_pred             eeEEeeec-----CcccEEEEEeCCCEEEEEeCCCcEEEEECCCc-e----------EEEEEcCC---cccEEEEEeCCC
Q psy9182         348 TLRRVLVG-----HRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC-E----------FVRTLNGH---KRGIACLQYRDR  408 (486)
Q Consensus       348 ~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~-~----------~~~~~~~~---~~~v~~~~~~~~  408 (486)
                      .+......     ....|..++....+.++-..+|.|+.|-.... +          ....+...   ...|..++....
T Consensus       217 ~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~~  296 (413)
T 1a12_A          217 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQH  296 (413)
T ss_dssp             SCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSS
T ss_pred             cCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEecccc
Confidence            00000000     23457777776667677778999999975431 0          11122211   134777887777


Q ss_pred             EEEEEeCCCcEEEEECCC------C-----e-eeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCC
Q psy9182         409 LVVSGSSDNTIRLWDIEC------G-----A-CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~------~-----~-~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ..++-..||.|+.|=...      +     . ....+.. ...|..|+.-....+.-..||.|..|-...
T Consensus       297 hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G~~hs~alt~~G~v~~wG~n~  365 (413)
T 1a12_A          297 HTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACGASVGYAVTKDGRVFAWGMGT  365 (413)
T ss_dssp             EEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred             eEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEECcceEEEEeCCCCEEEecCCC
Confidence            777778899999996532      1     0 1112222 237888888666666667899999998654

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=93.50  E-value=4.4  Score=37.98  Aligned_cols=144  Identities=10%  Similarity=0.066  Sum_probs=79.7

Q ss_pred             EEEEEEcC---CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC-C----cEEEEECCC
Q psy9182         317 VLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD-R----TIKVWNTSS  386 (486)
Q Consensus       317 i~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-~----~i~iwd~~~  386 (486)
                      ...+++++   +.|+++...+.|+.+|+..+....    +.........+++  ++++|+++... +    .+..++. .
T Consensus       139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~----~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~  213 (430)
T 3tc9_A          139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST----VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E  213 (430)
T ss_dssp             CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE----EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred             CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE----EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence            34566664   456666555788888887654321    1123344556666  67766666542 2    2333443 2


Q ss_pred             ceEE--EEEc--CCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEe--cCCEEEEE-eCCC
Q psy9182         387 CEFV--RTLN--GHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF--DAKRIVSG-AYDG  457 (486)
Q Consensus       387 ~~~~--~~~~--~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~-~~dg  457 (486)
                      +...  ..+.  .|... .++.. ++.++++-..++.|..++...+........ .......|++  ++++|+.+ ...+
T Consensus       214 g~~~~~~~l~~~~~p~g-iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~  292 (430)
T 3tc9_A          214 SGFKVITELTKGQNCNG-AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH  292 (430)
T ss_dssp             GTSCSEEEEEECSSCCC-EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred             CceeeeeeeccCCCceE-EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence            2221  2222  12222 22333 456666666788999999987664222221 2234678888  77855444 4677


Q ss_pred             cEEEEeCCC
Q psy9182         458 KIKVWNLVA  466 (486)
Q Consensus       458 ~v~iwdl~~  466 (486)
                      .|..++.+.
T Consensus       293 ~I~~~~~d~  301 (430)
T 3tc9_A          293 YILRSDYDW  301 (430)
T ss_dssp             EEEEEEEET
T ss_pred             EEEEEeCCc
Confidence            899988764

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=93.43  E-value=5.5  Score=37.94  Aligned_cols=229  Identities=10%  Similarity=0.076  Sum_probs=121.8

Q ss_pred             ceEEEEe-CCCEEEEE-ecCCeEEEEECCCceeeEEEcCC---cccEEEEEe---------cCCEEEEEeCCC-------
Q psy9182         236 GVYCLQY-DDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGH---TGSVLCLQY---------DERVIISGSSDS-------  294 (486)
Q Consensus       236 ~v~~~~~-~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~---~~~v~~~~~---------~~~~l~~~~~dg-------  294 (486)
                      .-+++.| ++..|+++ ...+.|++.|..++.........   ......+++         +++.|+++...+       
T Consensus       142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~  221 (496)
T 3kya_A          142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP  221 (496)
T ss_dssp             EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred             CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence            3456666 34444444 44467999999888776655432   224667766         577666666554       


Q ss_pred             cEEEEECCC-CcEE-----EEecccCccEEEEEEcC--C-eEEEEeCCCcEEEEECC-------CCCc-----------e
Q psy9182         295 TVRVWDVNT-GEMV-----NTLIHHCEAVLHLRFSN--G-MMVTCSKDRSIAVWDMV-------SPNE-----------I  347 (486)
Q Consensus       295 ~i~vwd~~~-~~~~-----~~~~~~~~~i~~~~~~~--~-~l~~~~~dg~i~i~d~~-------~~~~-----------~  347 (486)
                      .|.+++... +...     ..+.. ......++.++  + ++++-..++.|..+|+.       ++..           .
T Consensus       222 ~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~  300 (496)
T 3kya_A          222 SVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF  300 (496)
T ss_dssp             EEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred             eEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence            266776443 1211     12211 11233455655  3 44555677889999987       4443           1


Q ss_pred             eeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEEC--CCceE--EEEEcCC---c------------ccEE-EEE
Q psy9182         348 TLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNT--SSCEF--VRTLNGH---K------------RGIA-CLQ  404 (486)
Q Consensus       348 ~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~--~~~~~--~~~~~~~---~------------~~v~-~~~  404 (486)
                      .... ..+.......+++  ++++|+.+ +....|+.++.  ..+..  ...+-+.   .            .... .+.
T Consensus       301 ~~l~-~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~  379 (496)
T 3kya_A          301 KQLF-TIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF  379 (496)
T ss_dssp             EEEE-ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred             ceeE-ecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence            1111 1122233445666  77754444 45678888654  33322  1222111   0            0112 222


Q ss_pred             e---------CCCEEEEEeCCCcEEEEECCCCeeeEEecCc--------------c----------cCeEEEEecC--CE
Q psy9182         405 Y---------RDRLVVSGSSDNTIRLWDIECGACLRVLEGH--------------E----------ELVRCIRFDA--KR  449 (486)
Q Consensus       405 ~---------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h--------------~----------~~v~~~~~~~--~~  449 (486)
                      .         .+.++++-...+.|+.++ .+|. +.++.+.              .          .....|+++.  ..
T Consensus       380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~  457 (496)
T 3kya_A          380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM  457 (496)
T ss_dssp             EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred             EccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence            2         245666666778899998 4564 4444221              0          1356788843  44


Q ss_pred             EEEEe-CCCcEEEEeCCCCC
Q psy9182         450 IVSGA-YDGKIKVWNLVAAL  468 (486)
Q Consensus       450 l~s~~-~dg~v~iwdl~~~~  468 (486)
                      |+.+. ....|+.++++...
T Consensus       458 lyVaD~~N~rIrki~~~~~~  477 (496)
T 3kya_A          458 FYVHDQVGHTIRTISMEQEE  477 (496)
T ss_dssp             EEEEETTTTEEEEEEECCCC
T ss_pred             EEEEeCCCCEEEEEECCCCc
Confidence            55544 56789999987644

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=93.18  E-value=3.6  Score=44.44  Aligned_cols=167  Identities=8%  Similarity=0.166  Sum_probs=89.0

Q ss_pred             cceEEEEe-CCCEEEEEecCCeEEEEECCC-ceeeEEEcCCc----ccEEEEEe--cCCEEEEEe-------CCCcEEEE
Q psy9182         235 KGVYCLQY-DDHKIVSGLRDNTIKVWDRVS-LQCIKVLTGHT----GSVLCLQY--DERVIISGS-------SDSTVRVW  299 (486)
Q Consensus       235 ~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~----~~v~~~~~--~~~~l~~~~-------~dg~i~vw  299 (486)
                      ..|..|.| +.+.|+..+ +..|+.|++.. ..+.+.+..|.    ..|.....  +.++++..+       -.|.+.+|
T Consensus       106 e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy  184 (1630)
T 1xi4_A          106 DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY  184 (1630)
T ss_pred             CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence            34666666 445555444 45799999864 34555555442    33444333  455554332       34788899


Q ss_pred             ECCCCcEEEEecccCccEEEEEEcC----CeEEE-Ee---CCCcEEEEECCCC---CceeeEE---e-eec--CcccEEE
Q psy9182         300 DVNTGEMVNTLIHHCEAVLHLRFSN----GMMVT-CS---KDRSIAVWDMVSP---NEITLRR---V-LVG--HRAAVNV  362 (486)
Q Consensus       300 d~~~~~~~~~~~~~~~~i~~~~~~~----~~l~~-~~---~dg~i~i~d~~~~---~~~~~~~---~-~~~--~~~~v~~  362 (486)
                      ..+.+ ..+.+.+|......+...+    ..+++ +.   ..+.++|.++...   .......   . +..  ...-..+
T Consensus       185 S~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~  263 (1630)
T 1xi4_A          185 SVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA  263 (1630)
T ss_pred             ecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceE
Confidence            88644 3344555554444444432    12222 21   1378999998553   1110000   0 000  0111123


Q ss_pred             EEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEE
Q psy9182         363 VDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL  403 (486)
Q Consensus       363 ~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~  403 (486)
                      +..  .-..++..+.-|.|.+||+.++.++..-+-....|...
T Consensus       264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~  306 (1630)
T 1xi4_A          264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT  306 (1630)
T ss_pred             EEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEe
Confidence            333  34567777888999999999999877655444444333

>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A

Probab=93.13  E-value=5.5  Score=37.01  Aligned_cols=232  Identities=10%  Similarity=0.102  Sum_probs=139.5

Q ss_pred             ceEEEEeCCCEEEEEecCC-eEEEEECCCc---------e--eeEEEcC-CcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182         236 GVYCLQYDDHKIVSGLRDN-TIKVWDRVSL---------Q--CIKVLTG-HTGSVLCLQYDERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg-~i~i~d~~~~---------~--~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~  302 (486)
                      .+..++....+.++-..++ .|+.|-....         .  ....+.. ....|..++......++-..+|.|+.|-..
T Consensus        69 ~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n  148 (406)
T 4d9s_A           69 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN  148 (406)
T ss_dssp             CEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred             CEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCC
Confidence            4666666666665555554 8999953221         0  0111111 223678888877777777899999999654


Q ss_pred             CC-c---------E-EEEecc-cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc---------eeeEEeeecCcccEE
Q psy9182         303 TG-E---------M-VNTLIH-HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE---------ITLRRVLVGHRAAVN  361 (486)
Q Consensus       303 ~~-~---------~-~~~~~~-~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~~~v~  361 (486)
                      .. +         . ...+.. ....|..++......++-..+|.|+.|-......         .............+.
T Consensus       149 ~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~  228 (406)
T 4d9s_A          149 QNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS  228 (406)
T ss_dssp             TTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEE
T ss_pred             CCccCCCCCCCCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEE
Confidence            21 1         1 111221 2336788888788888888999999996433211         111111112234577


Q ss_pred             EEEeCCCEEEEEeCCCcEEEEECCCc-----------eEEEEEcC-CcccEEEEEeCCCEEEEEeCCCcEEEEECCCC--
Q psy9182         362 VVDFDEKYIVSASGDRTIKVWNTSSC-----------EFVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIECG--  427 (486)
Q Consensus       362 ~~~~~~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~--  427 (486)
                      .++....+.+.-..+|.|+.|-....           .....+.. ....|..++......++-..||.|+.|=....  
T Consensus       229 ~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~Gq  308 (406)
T 4d9s_A          229 MVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQ  308 (406)
T ss_dssp             EEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTST
T ss_pred             EEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCC
Confidence            77777777777788999999974321           11112221 22357777777777777789999999965321  


Q ss_pred             ----------eeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         428 ----------ACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       428 ----------~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                                .+..........|..|+.-....+.-..||.|..|=-...
T Consensus       309 LG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~~  358 (406)
T 4d9s_A          309 VGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN  358 (406)
T ss_dssp             TCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred             CCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCCC
Confidence                      1111111123468888885566666678999999986543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=92.00  E-value=6.4  Score=35.11  Aligned_cols=189  Identities=13%  Similarity=0.139  Sum_probs=104.9

Q ss_pred             EEEeCCCEEEEEe-cCCeEEEEECCCceeeEE-EcC----Cc--ccEEEEEe---c--CCEEEEEe-------------C
Q psy9182         239 CLQYDDHKIVSGL-RDNTIKVWDRVSLQCIKV-LTG----HT--GSVLCLQY---D--ERVIISGS-------------S  292 (486)
Q Consensus       239 ~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~-~~~----~~--~~v~~~~~---~--~~~l~~~~-------------~  292 (486)
                      .+......+..++ ..+.|..||...+..... +.+    ..  ..+..+.+   |  +.++++..             .
T Consensus        19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g   98 (334)
T 2p9w_A           19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG   98 (334)
T ss_dssp             EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred             cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence            3444445666665 789999999876544333 222    11  13467777   3  33444333             2


Q ss_pred             CCcEEEEECC---CCcEEEEecc-------------cCccEEEEEEcC--CeEEEEeCC-CcEEEEECCCCCceeeEEee
Q psy9182         293 DSTVRVWDVN---TGEMVNTLIH-------------HCEAVLHLRFSN--GMMVTCSKD-RSIAVWDMVSPNEITLRRVL  353 (486)
Q Consensus       293 dg~i~vwd~~---~~~~~~~~~~-------------~~~~i~~~~~~~--~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~  353 (486)
                      +..|..+|+.   +++.+.....             .......++..+  +..++++.. +.|..++.............
T Consensus        99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~  178 (334)
T 2p9w_A           99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES  178 (334)
T ss_dssp             CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred             CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence            5779999999   7776654431             112366777764  466667777 77777776544221111111


Q ss_pred             --ecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceE--EEEE-cCC------cccEEEEEeCCCE-EEEEeCCCcE
Q psy9182         354 --VGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF--VRTL-NGH------KRGIACLQYRDRL-VVSGSSDNTI  419 (486)
Q Consensus       354 --~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~--~~~~-~~~------~~~v~~~~~~~~~-l~~~~~dg~v  419 (486)
                        .......+.+.+  +++.|++....+.|..+|+.+...  +..- .+.      ...+.....+|+. +++....+.+
T Consensus       179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~  258 (334)
T 2p9w_A          179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAI  258 (334)
T ss_dssp             CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEE
T ss_pred             CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEE
Confidence              111112334444  788888887799999999885332  2111 021      1122233346777 4555556666


Q ss_pred             EEEECCCC
Q psy9182         420 RLWDIECG  427 (486)
Q Consensus       420 ~iwd~~~~  427 (486)
                      .+.+....
T Consensus       259 ~l~S~DgW  266 (334)
T 2p9w_A          259 SFRSWDNW  266 (334)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCc
Confidence            66665543

>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}

Probab=90.86  E-value=10  Score=35.30  Aligned_cols=191  Identities=9%  Similarity=0.035  Sum_probs=113.9

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEEC--C-Ccee---------eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCC
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDR--V-SLQC---------IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNT  303 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~--~-~~~~---------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~  303 (486)
                      .+..++......++-..||.|+.|-.  . .++.         ..........|..++......++-..+|.|+.|-...
T Consensus       128 ~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~  207 (423)
T 3mvd_K          128 KALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAE  207 (423)
T ss_dssp             CEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred             CEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCc
Confidence            45566666677777788899999974  2 1221         1111123346788888777777778899999995432


Q ss_pred             C-----------------------cEEEEecccCccEEEEEEcCCeEEEE-eCCCcEEEEECCCCCce--------eeEE
Q psy9182         304 G-----------------------EMVNTLIHHCEAVLHLRFSNGMMVTC-SKDRSIAVWDMVSPNEI--------TLRR  351 (486)
Q Consensus       304 ~-----------------------~~~~~~~~~~~~i~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~--------~~~~  351 (486)
                      .                       .+..........|..++......++. ..+|.|+.|-......+        ....
T Consensus       208 ~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~  287 (423)
T 3mvd_K          208 QGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALT  287 (423)
T ss_dssp             TSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEE
T ss_pred             CCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeee
Confidence            1                       11111112234566666665544444 68999999965431110        0001


Q ss_pred             eeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCc------------eEEEEEcCCcccEEEEEeCCCEEEEEeCCCcE
Q psy9182         352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC------------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI  419 (486)
Q Consensus       352 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~------------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v  419 (486)
                      ........|..++....+.+.-..+|.|+.|-....            .....+..-...|..++......++-..||.|
T Consensus       288 p~~~~~~~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v  367 (423)
T 3mvd_K          288 PIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKL  367 (423)
T ss_dssp             EEEECCCSEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCE
T ss_pred             eEEcCCCCeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCE
Confidence            111113467777777777777788999999974321            11222333333678888877777777899999


Q ss_pred             EEEECCC
Q psy9182         420 RLWDIEC  426 (486)
Q Consensus       420 ~iwd~~~  426 (486)
                      +.|=...
T Consensus       368 ~~wG~n~  374 (423)
T 3mvd_K          368 YSWGSGV  374 (423)
T ss_dssp             EEEECCT
T ss_pred             EEECCCC
Confidence            9997643

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=88.98  E-value=15  Score=34.38  Aligned_cols=145  Identities=10%  Similarity=0.047  Sum_probs=77.4

Q ss_pred             EEEEEecC----CEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC-eEEEEeCCC-----cEEEEECCCCCc
Q psy9182         277 VLCLQYDE----RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG-MMVTCSKDR-----SIAVWDMVSPNE  346 (486)
Q Consensus       277 v~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~~  346 (486)
                      ...++++.    ..|+.+...+.|+.+|..+++..... ........++++++ .|+++...+     .+..++......
T Consensus       141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~  219 (433)
T 4hw6_A          141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT  219 (433)
T ss_dssp             CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred             CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence            35666652    56666655588999999877665443 34556778888743 355554322     233333322211


Q ss_pred             eeeEEeeecCcccEE--EEEe-CCCEEEEEeCCCcEEEEECCCceEEEEE-cC-CcccEEEEEe--CCCEE-EEEeCCCc
Q psy9182         347 ITLRRVLVGHRAAVN--VVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTL-NG-HKRGIACLQY--RDRLV-VSGSSDNT  418 (486)
Q Consensus       347 ~~~~~~~~~~~~~v~--~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~-~~~~v~~~~~--~~~~l-~~~~~dg~  418 (486)
                      ..  .... ......  ++.. ++.+.++-..++.|+.+|..++.....+ .. ....-..+++  +++.| ++-...+.
T Consensus       220 ~~--~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~  296 (433)
T 4hw6_A          220 ER--LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC  296 (433)
T ss_dssp             CE--EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred             cc--cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence            00  0111 111122  2333 4555555556788999999877653332 21 1122234555  47744 45556788


Q ss_pred             EEEEECC
Q psy9182         419 IRLWDIE  425 (486)
Q Consensus       419 v~iwd~~  425 (486)
                      |+.++..
T Consensus       297 I~~~~~d  303 (433)
T 4hw6_A          297 IYRVDYN  303 (433)
T ss_dssp             EEEEEBC
T ss_pred             EEEEeCC
Confidence            9998865

>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}

Probab=88.55  E-value=17  Score=34.47  Aligned_cols=188  Identities=11%  Similarity=0.131  Sum_probs=114.5

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECC---Ccee------------eEEEcC-CcccEEEEEecCCEEEEEeCCCcEEE
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRV---SLQC------------IKVLTG-HTGSVLCLQYDERVIISGSSDSTVRV  298 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~---~~~~------------~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~i~v  298 (486)
                      ..+..++......++-..+|.|+.|-..   .++.            ...+.. ....|..++......++-..+|.|+.
T Consensus       148 ~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~  227 (473)
T 3of7_A          148 HKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFA  227 (473)
T ss_dssp             CCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred             CcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEE
Confidence            4566666677777777888999988641   1110            111111 12347888887777777889999999


Q ss_pred             EECCCC-cE--------------EEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc------------e-eeE
Q psy9182         299 WDVNTG-EM--------------VNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE------------I-TLR  350 (486)
Q Consensus       299 wd~~~~-~~--------------~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------------~-~~~  350 (486)
                      |-.... ++              ...+  ....|..++......++-..+|.|+.|-......            . ...
T Consensus       228 wG~n~~GqLG~~~~~~~~~~~~~p~~~--~~~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~  305 (473)
T 3of7_A          228 WGNGQQNQLGRKVMERFRLKTLDPRPF--GLRHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPK  305 (473)
T ss_dssp             EECCTTSTTSSCCCGGGTTTTCSCEEC--SCCSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEE
T ss_pred             EeCCCCCCCCCCccccccccccCceec--CCcceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccc
Confidence            965321 11              0011  1246777877777888888999999996532110            1 111


Q ss_pred             EeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCC-ce-------------------E-----EEEEcCCcccEEEEEe
Q psy9182         351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSS-CE-------------------F-----VRTLNGHKRGIACLQY  405 (486)
Q Consensus       351 ~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~-~~-------------------~-----~~~~~~~~~~v~~~~~  405 (486)
                      .........|..++......++-..+|.|+.|-... ++                   .     ...+. ....|..++.
T Consensus       306 ~v~~~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~-~~~~v~~Ia~  384 (473)
T 3of7_A          306 RLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLN-NVPKFKSVAA  384 (473)
T ss_dssp             ECCCCTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECC-SSCCEEEEEE
T ss_pred             cccccCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccC-CCCceEEEEe
Confidence            111112245777777666666677899999997432 11                   0     01111 1126777887


Q ss_pred             CCCEEEEEeCCCcEEEEECC
Q psy9182         406 RDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       406 ~~~~l~~~~~dg~v~iwd~~  425 (486)
                      .....++-..||.|+.|=..
T Consensus       385 G~~hs~al~~~G~vy~wG~n  404 (473)
T 3of7_A          385 GSHHSVAVAQNGIAYSWGFG  404 (473)
T ss_dssp             CSSEEEEEETTSCEEEEECC
T ss_pred             CCCeEEEEeCCCcEEEeeCC
Confidence            77777777899999999654

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=86.40  E-value=11  Score=37.60  Aligned_cols=71  Identities=11%  Similarity=0.270  Sum_probs=49.4

Q ss_pred             ccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc-------------cCeEEEEecCCEEEEEe--CCCcEEEE
Q psy9182         398 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-------------ELVRCIRFDAKRIVSGA--YDGKIKVW  462 (486)
Q Consensus       398 ~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~-------------~~v~~~~~~~~~l~s~~--~dg~v~iw  462 (486)
                      ..|.++.++..++++-+.|+++|+|++++++++....-..             .+-.-+..-+.++++=+  .+|..++|
T Consensus       222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~  301 (729)
T 3f7f_A          222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMG  301 (729)
T ss_dssp             CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEE
T ss_pred             ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEE
Confidence            3577888889999999999999999999999887764311             11112333336666544  57899999


Q ss_pred             eCCCCC
Q psy9182         463 NLVAAL  468 (486)
Q Consensus       463 dl~~~~  468 (486)
                      ++....
T Consensus       302 ~l~~~~  307 (729)
T 3f7f_A          302 TLLVDS  307 (729)
T ss_dssp             EEEC--
T ss_pred             EEEEcC
Confidence            986543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=85.57  E-value=23  Score=32.88  Aligned_cols=142  Identities=13%  Similarity=0.145  Sum_probs=87.7

Q ss_pred             EEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC----cccEEEEE--ecCCEEEEEeCCCcEEEEECCCCc-------
Q psy9182         239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH----TGSVLCLQ--YDERVIISGSSDSTVRVWDVNTGE-------  305 (486)
Q Consensus       239 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~--~~~~~l~~~~~dg~i~vwd~~~~~-------  305 (486)
                      ....++..++.+- ++.||.-++......+.++..    -..|..+.  .+|++|+..+. ..|.|..+..+.       
T Consensus        27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~  104 (452)
T 3pbp_A           27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS  104 (452)
T ss_dssp             EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred             EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence            3445677766654 578888887755455555432    12354444  47888888765 478888876321       


Q ss_pred             -----EEEEecc------cCccEEEEEEcC-----CeEEEEeCCCcEEEEECCCCCceee-EE------eeecCcccEEE
Q psy9182         306 -----MVNTLIH------HCEAVLHLRFSN-----GMMVTCSKDRSIAVWDMVSPNEITL-RR------VLVGHRAAVNV  362 (486)
Q Consensus       306 -----~~~~~~~------~~~~i~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~-~~------~~~~~~~~v~~  362 (486)
                           ..+.+.-      ...+|..+.|+|     ..|++-..|+.|++||+........ ..      ........+.+
T Consensus       105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S  184 (452)
T 3pbp_A          105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITD  184 (452)
T ss_dssp             HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEE
T ss_pred             cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEE
Confidence                 1223322      246799999986     3899999999999999986332111 10      11122356778


Q ss_pred             EEe--CCCEEEEEe--CCCcEEEE
Q psy9182         363 VDF--DEKYIVSAS--GDRTIKVW  382 (486)
Q Consensus       363 ~~~--~~~~l~~~~--~d~~i~iw  382 (486)
                      ++|  ++-.|...+  ..|.|+-.
T Consensus       185 ~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          185 LEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             EEECTTSSCEEEEECTTSCEEEEE
T ss_pred             EEEcCCCcEEEEEecCCCCCEEEE
Confidence            888  444555544  77777654

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=85.19  E-value=24  Score=32.76  Aligned_cols=127  Identities=15%  Similarity=0.103  Sum_probs=75.5

Q ss_pred             CCcEEEEECCCCCceeeEEeee-cCcccE--EEEEeCCCEEEEEeCCCcEEEEECCCce------------EEEEEcC--
Q psy9182         333 DRSIAVWDMVSPNEITLRRVLV-GHRAAV--NVVDFDEKYIVSASGDRTIKVWNTSSCE------------FVRTLNG--  395 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~~~~~~~-~~~~~v--~~~~~~~~~l~~~~~d~~i~iwd~~~~~------------~~~~~~~--  395 (486)
                      ++.||.-++......+...... -.-..+  ..+..+|++|+..+. ..|.|-.+..+.            ..+.+.-  
T Consensus        40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~  118 (452)
T 3pbp_A           40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE  118 (452)
T ss_dssp             TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred             CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCC
Confidence            4677777766433222222110 001123  334448889988865 578888876321            1223332  


Q ss_pred             ----CcccEEEEEeC-----CCEEEEEeCCCcEEEEECCCC--eeeEEec---------CcccCeEEEEe--cCCEEEEE
Q psy9182         396 ----HKRGIACLQYR-----DRLVVSGSSDNTIRLWDIECG--ACLRVLE---------GHEELVRCIRF--DAKRIVSG  453 (486)
Q Consensus       396 ----~~~~v~~~~~~-----~~~l~~~~~dg~v~iwd~~~~--~~~~~~~---------~h~~~v~~~~~--~~~~l~s~  453 (486)
                          ...+|..+.|+     +..|++-..|+.|++||+...  ++. .++         .....|.+++|  ++-.|...
T Consensus       119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl  197 (452)
T 3pbp_A          119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCL  197 (452)
T ss_dssp             CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEE
T ss_pred             cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEE
Confidence                24678999995     678999999999999999752  222 332         22356889999  44445554


Q ss_pred             e--CCCcEEE
Q psy9182         454 A--YDGKIKV  461 (486)
Q Consensus       454 ~--~dg~v~i  461 (486)
                      +  .+|.|+-
T Consensus       198 ~~t~~GDIYA  207 (452)
T 3pbp_A          198 NTTEGGDIFA  207 (452)
T ss_dssp             ECTTSCEEEE
T ss_pred             ecCCCCCEEE
Confidence            4  6676654

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=84.92  E-value=15  Score=36.51  Aligned_cols=69  Identities=12%  Similarity=0.268  Sum_probs=48.0

Q ss_pred             ccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcc-------------cEEEEEeCCCEEEEEe--CCCcEEEE
Q psy9182         358 AAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR-------------GIACLQYRDRLVVSGS--SDNTIRLW  422 (486)
Q Consensus       358 ~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-------------~v~~~~~~~~~l~~~~--~dg~v~iw  422 (486)
                      ..|.++.++..++++-+.|.++|+||+++++++....-...             .-.-+..-+.++++=.  .+|..++|
T Consensus       222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~  301 (729)
T 3f7f_A          222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMG  301 (729)
T ss_dssp             CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEE
T ss_pred             ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEE
Confidence            45777788899999999999999999999998887653111             1111222245555433  56889999


Q ss_pred             ECCC
Q psy9182         423 DIEC  426 (486)
Q Consensus       423 d~~~  426 (486)
                      .+..
T Consensus       302 ~l~~  305 (729)
T 3f7f_A          302 TLLV  305 (729)
T ss_dssp             EEEC
T ss_pred             EEEE
Confidence            8853

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=81.38  E-value=38  Score=32.24  Aligned_cols=148  Identities=10%  Similarity=0.130  Sum_probs=80.8

Q ss_pred             EEEEEEcC---CeEEEEe-CCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---------CCCEEEEEeCCC------
Q psy9182         317 VLHLRFSN---GMMVTCS-KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---------DEKYIVSASGDR------  377 (486)
Q Consensus       317 i~~~~~~~---~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~l~~~~~d~------  377 (486)
                      ...|+++|   +.|+++. ..+.|++.|+..+..................+++         ++++|+++...+      
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~  220 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES  220 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence            45677775   3444444 3467888888776543322211111224566666         677677766554      


Q ss_pred             -cEEEEECCC-ce--------EEEEEcCCcccEEEEEe-CCCEEEEEeCCCcEEEEECC-------CCee----------
Q psy9182         378 -TIKVWNTSS-CE--------FVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIE-------CGAC----------  429 (486)
Q Consensus       378 -~i~iwd~~~-~~--------~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~v~iwd~~-------~~~~----------  429 (486)
                       .|.+++... +.        .+..+. |...+ ++.. ++.++++-..++.|..+|+.       ++..          
T Consensus       221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~gi-avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g  298 (496)
T 3kya_A          221 PSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGA-TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN  298 (496)
T ss_dssp             EEEEEEECCTTSCCSTTSCEEEEEEES-CCCCE-EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred             ceEEEEecCCCCceeecccceeeccCC-CceEE-EEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence             266666443 22        222222 22222 2333 35566666678889999987       5543          


Q ss_pred             -eEE-ec-CcccCeEEEEe--cCCEEEEE-eCCCcEEEEeCCC
Q psy9182         430 -LRV-LE-GHEELVRCIRF--DAKRIVSG-AYDGKIKVWNLVA  466 (486)
Q Consensus       430 -~~~-~~-~h~~~v~~~~~--~~~~l~s~-~~dg~v~iwdl~~  466 (486)
                       ... +. +.......|+|  ++++|..+ .....|+.++.+.
T Consensus       299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg  341 (496)
T 3kya_A          299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE  341 (496)
T ss_dssp             TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence             112 11 22344678888  77755444 4567788866543

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=80.37  E-value=30  Score=30.42  Aligned_cols=210  Identities=9%  Similarity=-0.013  Sum_probs=114.8

Q ss_pred             EeCCCEEEEEe--cCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCC--------------CcEEEEECCCC
Q psy9182         241 QYDDHKIVSGL--RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD--------------STVRVWDVNTG  304 (486)
Q Consensus       241 ~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------------g~i~vwd~~~~  304 (486)
                      +.++..++...  .++.|...+....... .+..  ..+..+..++++|+-+...              ..|+..++..+
T Consensus        22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~-~l~~--~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~   98 (302)
T 3s25_A           22 CESDGEVFFSNTNDNGRLYAMNIDGSNIH-KLSN--DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH   98 (302)
T ss_dssp             EEETTEEEEEEGGGTTEEEEEETTSCSCE-EEEE--EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred             EEeCCEEEEEeCCCCceEEEEcCCCCCCE-EccC--CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence            45677766654  2566777776544433 3321  2345566678777766543              36777787766


Q ss_pred             cEEEEecccCccEEEEEEcCCeEEEEe----CCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeC-CCcE
Q psy9182         305 EMVNTLIHHCEAVLHLRFSNGMMVTCS----KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG-DRTI  379 (486)
Q Consensus       305 ~~~~~~~~~~~~i~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-d~~i  379 (486)
                      +......   .....++..++.++-..    .+..|+..++......    .+..+..  ..+.++++.|+-.+. ...|
T Consensus        99 ~~~~l~~---~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~----~lt~~~~--~~~~~~g~~iy~t~~g~~~I  169 (302)
T 3s25_A           99 GSTVLDP---DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK----KIKNHYL--FTCNTSDRYFYYNNPKNGQL  169 (302)
T ss_dssp             CCEEEEC---SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE----EEESSCC--CCSEEETTEEEEECTTTCCE
T ss_pred             cceEeec---CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE----EEeCCCc--eEeeEECCEEEEEeCCCceE
Confidence            5332222   23335666777776655    3445666666543322    1222222  345677777776554 6788


Q ss_pred             EEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCC--CcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeC--
Q psy9182         380 KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD--NTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAY--  455 (486)
Q Consensus       380 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~--  455 (486)
                      ...++..+.....+.+.. . ..+.+++.+|+-...+  ..|..-++..+. ...+..  ..+..+++++++|.-++.  
T Consensus       170 y~~~l~g~~~~~l~~~~~-~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~~~~~~~g~~Iy~~~~~~  244 (302)
T 3s25_A          170 YRYDTASQSEALFYDCNC-Y-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANIEHYNVYGSLIFYQRGGD  244 (302)
T ss_dssp             EEEETTTTEEEEEECSCE-E-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCEEEEEEETTEEEEEECSS
T ss_pred             EEEECCCCCEEEEeCCCc-c-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCcceEEECCCEEEEEECCC
Confidence            888987766544444322 1 2244567776655543  356666666433 344432  334567777777765432  


Q ss_pred             CCcEEEEeCCCC
Q psy9182         456 DGKIKVWNLVAA  467 (486)
Q Consensus       456 dg~v~iwdl~~~  467 (486)
                      .+.|..-+++..
T Consensus       245 ~~~i~~~~~DG~  256 (302)
T 3s25_A          245 NPALCVVKNDGT  256 (302)
T ss_dssp             SCEEEEEETTSC
T ss_pred             CcEEEEEECCCC
Confidence            345555555543

>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B

Probab=80.10  E-value=37  Score=31.34  Aligned_cols=188  Identities=6%  Similarity=0.028  Sum_probs=115.4

Q ss_pred             ceEEEEeCCCEEEEEecCCeEEEEEC--C-Ccee-----------eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEEC
Q psy9182         236 GVYCLQYDDHKIVSGLRDNTIKVWDR--V-SLQC-----------IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDV  301 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~~~dg~i~i~d~--~-~~~~-----------~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~  301 (486)
                      .+..++......++-..||.|+.|-.  . .+++           ...+ .....|..++......++-..||.|+.|=.
T Consensus       112 ~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~G~~hs~alt~~G~v~~wG~  190 (413)
T 1a12_A          112 KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVASGNDHLVMLTADGDLYTLGC  190 (413)
T ss_dssp             CEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred             cEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe-cCCCCEEEEEecCceEEEEcCCCCEEEeeC
Confidence            45666666677777788888888864  1 1110           1111 233467788887777777788999999965


Q ss_pred             CCC-cE---------------------EEEecc------cCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCc-------
Q psy9182         302 NTG-EM---------------------VNTLIH------HCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNE-------  346 (486)
Q Consensus       302 ~~~-~~---------------------~~~~~~------~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------  346 (486)
                      ... ++                     ...+..      ....|..++......++-..+|.|+.|-......       
T Consensus       191 n~~GqLG~~~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~  270 (413)
T 1a12_A          191 GEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTE  270 (413)
T ss_dssp             CTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCS
T ss_pred             CCCCccCCCccccccccccccccccccCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCC
Confidence            421 10                     001111      2346778887777777778999999997643211       


Q ss_pred             -eeeEEeeec---CcccEEEEEeCCCEEEEEeCCCcEEEEECCC------c------eEEEEEcCCcccEEEEEeCCCEE
Q psy9182         347 -ITLRRVLVG---HRAAVNVVDFDEKYIVSASGDRTIKVWNTSS------C------EFVRTLNGHKRGIACLQYRDRLV  410 (486)
Q Consensus       347 -~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~------~------~~~~~~~~~~~~v~~~~~~~~~l  410 (486)
                       .........   ....|..++....+.+.-..+|.|+.|-...      +      .....+.. ...|..++......
T Consensus       271 ~~~~P~~v~~l~~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~-l~~v~~v~~G~~hs  349 (413)
T 1a12_A          271 SCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISR-LPAVSSVACGASVG  349 (413)
T ss_dssp             CEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCS-SSSEEEEEECSSEE
T ss_pred             cccccEEchhccCCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEecc-cCceeEEEECcceE
Confidence             011111111   1134777777667777777899999996432      1      11112222 23678888877777


Q ss_pred             EEEeCCCcEEEEECC
Q psy9182         411 VSGSSDNTIRLWDIE  425 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~  425 (486)
                      ++-..||.|+.|=..
T Consensus       350 ~alt~~G~v~~wG~n  364 (413)
T 1a12_A          350 YAVTKDGRVFAWGMG  364 (413)
T ss_dssp             EEEETTSCEEEEECC
T ss_pred             EEEeCCCCEEEecCC
Confidence            778899999999654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	486
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-53
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-35
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-30
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-19
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-40
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-39
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-17
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-14
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-39
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-29
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-27
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-04
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-29
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-29
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-21
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-20
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-25
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-14
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-10
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.001
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-25
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-25
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-15
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-11
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	8e-21
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-09
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-20
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	4e-15
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-20
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-09
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-06
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	3e-19
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	4e-14
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	4e-10
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.002
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	6e-17
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	5e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-17
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-09
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-16
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-11
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-08
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	6e-16
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-12
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-10
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-07
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	0.003
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-16
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-16
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-13
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-13
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-08
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-15
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	7e-12
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-10
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	7e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	3e-15
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-13
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-12
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-11
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	8e-09
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	8e-04
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.001
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	4e-12
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	8e-08
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	4e-07
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	6e-11
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	1e-07
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	3e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	4e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.002
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	2e-08
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	1e-04
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	0.003
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	3e-08
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	5e-07
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	3e-06
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.002
d2ovrb1	102	a.158.1.1 (B:2263-2364) F-box/WD repeat-containing	4e-04
d1jofa_	365	b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactoniz	8e-04

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (453), Expect = 3e-53
 Identities = 237/263 (90%), Positives = 252/263 (95%)

Query: 220 GKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC 279
           G+  LQRI+CRSE SKGVYCLQYDD KIVSGLRDNTIK+WD+ +L+C ++LTGHTGSVLC
Sbjct: 1   GRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC 60

Query: 280 LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVW 339
           LQYDERVII+GSSDSTVRVWDVNTGEM+NTLIHHCEAVLHLRF+NGMMVTCSKDRSIAVW
Sbjct: 61  LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 120

Query: 340 DMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 399
           DM SP +ITLRRVLVGHRAAVNVVDFD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRG
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180

Query: 400 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKI 459
           IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD KRIVSGAYDGKI
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 240

Query: 460 KVWNLVAALDPRAPTTTLCLRTL 482
           KVW+LVAALDPRAP  TLCLRTL
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTL 263

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (328), Expect = 3e-35
 Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 11/276 (3%)

Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
           +D++ IVS   D TIK+W+ ++ E  R L GH   + CLQY +R+++   + ++      
Sbjct: 23  YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVII---TGSSDSTVRV 79

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
           + + +    +T++             G           ++ +        L+R+      
Sbjct: 80  WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 139

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
           +  V           SG  D TIKVW+  + + ++ L GH   + CLQY +R+++SGSSD
Sbjct: 140 AVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 197

Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS------PNEI 347
           +T+R+WD+  G  +  L  H E V  +RF N  +V+ + D  I VWD+V+      P   
Sbjct: 198 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGT 257

Query: 348 TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
              R LV H   V  + FDE  IVS+S D TI +W+
Sbjct: 258 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 1e-30
 Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 31/301 (10%)

Query: 139 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTILIWDFLNYS 194
           +   +   +G+ CLQY D+ +VSG  DNTI+  D    E + + + H  ++L   +    
Sbjct: 8   IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 67

Query: 195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN 254
                            S            + +N    + + V  L++++  +V+  +D 
Sbjct: 68  IITGS------------SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 115

Query: 255 TIKVWDRVSLQCI---KVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
           +I VWD  S   I   +VL GH  +V  + +D++ I+S S D T++VW+ +T E V TL 
Sbjct: 116 SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 175

Query: 312 HHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIV 371
            H   +  L++ + ++V+ S D +I +WD+     +   RVL GH   V  + FD K IV
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL---RVLEGHEELVRCIRFDNKRIV 232

Query: 372 SASGDRTIKVWNTSSCE---------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 422
           S + D  IKVW+  +            +RTL  H   +  LQ+ +  +VS S D+TI +W
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292

Query: 423 D 423
           D
Sbjct: 293 D 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (209), Expect = 5e-19
 Identities = 86/197 (43%), Positives = 106/197 (53%), Gaps = 57/197 (28%)

Query: 113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
           +FD+KYIVSASGDRTIKVWNTS+CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR   
Sbjct: 145 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIR--- 201

Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSE 232
                         +WD                                     +     
Sbjct: 202 --------------LWDIECG-------------------------------ACLRVLEG 216

Query: 233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVS---------LQCIKVLTGHTGSVLCLQYD 283
           + + V C+++D+ +IVSG  D  IKVWD V+           C++ L  H+G V  LQ+D
Sbjct: 217 HEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD 276

Query: 284 ERVIISGSSDSTVRVWD 300
           E  I+S S D T+ +WD
Sbjct: 277 EFQIVSSSHDDTILIWD 293

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (368), Expect = 2e-40
 Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 19/321 (5%)

Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
           F    IVS S D T+KVW+  + + +RTL GH  G+   Q RD        +  I    +
Sbjct: 25  FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--------NIIISGSTD 76

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
             +   + +    I     ++ T            SG              Q ++    +
Sbjct: 77  RTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH 136

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
              V C+QYD  ++VSG  D  +KVWD  +  C+  L GHT  V  LQ+D   ++SGS D
Sbjct: 137 VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLD 196

Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
           +++RVWDV TG  ++TL  H      +   + ++V+ + D ++ +WD+ +   +   +  
Sbjct: 197 TSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGP 256

Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-----GHKRGIACLQYRD- 407
             H++AV  + F++ +++++S D T+K+W+  + EF+R L      G    +  ++  + 
Sbjct: 257 NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNT 316

Query: 408 -RLVVSGSSDNT----IRLWD 423
             +   GS + T    + + D
Sbjct: 317 KLVCAVGSRNGTEETKLLVLD 337

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 1e-39
 Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 34/353 (9%)

Query: 131 WNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRD----EFQIVSSSHDDTI 185
           W     +  + L GH   +  CLQ+    +VSGS DNT++       +       H   +
Sbjct: 1   WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60

Query: 186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH 245
                                  SG +            + I+    ++  V C+   + 
Sbjct: 61  WSSQM------------RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 108

Query: 246 KIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE 305
           ++VSG RD T++VWD  + QC+ VL GH  +V C+QYD R ++SG+ D  V+VWD  T  
Sbjct: 109 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET 168

Query: 306 MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF 365
            ++TL  H   V  L+F    +V+ S D SI VWD+ + N I     L GH++  + ++ 
Sbjct: 169 CLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI---HTLTGHQSLTSGMEL 225

Query: 366 DEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW 422
            +  +VS + D T+K+W+  + + +   +  N H+  + CLQ+    V++ S D T++LW
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285

Query: 423 DIECGACLRVL-----EGHEELVRCIRF--DAKRIVSGAYDG----KIKVWNL 464
           D++ G  +R L      G   +V  IR          G+ +G    K+ V + 
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (198), Expect = 2e-17
 Identities = 61/326 (18%), Positives = 108/326 (33%), Gaps = 62/326 (19%)

Query: 29  ISVSSASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMC 88
           +  S     +          +                    +     +   V        
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 89  HYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG 148
                     L  ++          +D + +VS + D  +KVW+  +   + TL GH   
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179

Query: 149 IACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPP 208
           +  LQ+    VVSGS D +IR                 +WD                   
Sbjct: 180 VYSLQFDGIHVVSGSLDTSIR-----------------VWDVETG--------------- 207

Query: 209 SGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD---RVSLQ 265
                             I+  + +      ++  D+ +VSG  D+T+K+WD      LQ
Sbjct: 208 ----------------NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQ 251

Query: 266 CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI-----HHCEAVLHL 320
            ++    H  +V CLQ+++  +I+ S D TV++WD+ TGE +  L+          V  +
Sbjct: 252 TLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 311

Query: 321 RFSNGMMVTCS------KDRSIAVWD 340
           R SN  +V         ++  + V D
Sbjct: 312 RASNTKLVCAVGSRNGTEETKLLVLD 337

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (170), Expect = 7e-14
 Identities = 50/251 (19%), Positives = 93/251 (37%), Gaps = 56/251 (22%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
           M      +  + D    V      M         T L  +           FD  ++VS 
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSG 193

Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD 182
           S D +I+VW+  +   + TL GH+   + ++ +D ++VSG++D+T++             
Sbjct: 194 SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK------------- 240

Query: 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY 242
               IWD                                  LQ +   +++   V CLQ+
Sbjct: 241 ----IWDIKTG----------------------------QCLQTLQGPNKHQSAVTCLQF 268

Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLT-----GHTGSVLCLQY--DERVIISGSSDST 295
           + + +++   D T+K+WD  + + I+ L      G  G V  ++    + V   GS + T
Sbjct: 269 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 328

Query: 296 ----VRVWDVN 302
               + V D +
Sbjct: 329 EETKLLVLDFD 339

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  141 bits (355), Expect = 9e-39
 Identities = 83/346 (23%), Positives = 142/346 (41%), Gaps = 42/346 (12%)

Query: 129 KVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD----EFQIVSSSHD 182
           K W     E    L+GH+  +  + +     ++VS S D TI+  D    +F+     H 
Sbjct: 1   KEWIPRPPE-KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59

Query: 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY 242
           D++    F +  +             S       W    F   R     +++     +  
Sbjct: 60  DSVQDISFDHSGKLLAS--------CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 111

Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWD 300
           +   IVS  RD TIK+W+  +  C+K  TGH   V  ++   D  +I S S+D TVRVW 
Sbjct: 112 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171

Query: 301 VNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAV 360
           V T E    L  H   V  + ++     +   + + +                       
Sbjct: 172 VATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK---------------- 215

Query: 361 NVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNT 418
                   +++S S D+TIK+W+ S+   + TL GH   +  + +    + ++S + D T
Sbjct: 216 -----PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT 270

Query: 419 IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVW 462
           +R+WD +   C++ L  HE  V  + F   A  +V+G+ D  +KVW
Sbjct: 271 LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  115 bits (287), Expect = 3e-29
 Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 35/263 (13%)

Query: 234 SKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGS 291
              V  + +      +VS   D TIKVWD  +    + L GHT SV  + +D    +  S
Sbjct: 17  RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76

Query: 292 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF----SNGMMVTCSKDRSIAVWDMVSPNEI 347
             + + +   +          H             +   +V+ S+D++I +W++ +   +
Sbjct: 77  CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136

Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY 405
              +   GHR  V +V    D   I S S D+T++VW  ++ E    L  H+  + C+ +
Sbjct: 137 ---KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193

Query: 406 R----------------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI 443
                                     ++SGS D TI++WD+  G CL  L GH+  VR +
Sbjct: 194 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253

Query: 444 RF--DAKRIVSGAYDGKIKVWNL 464
            F    K I+S A D  ++VW+ 
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDY 276

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (270), Expect = 5e-27
 Identities = 61/304 (20%), Positives = 102/304 (33%), Gaps = 34/304 (11%)

Query: 43  ILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPM 102
            ++D                +    FD   +       +  +          I T     
Sbjct: 42  KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 101

Query: 103 LQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVV 160
                +S++P  +  +IVSAS D+TIK+W   +   V+T  GH+  +  ++      L+ 
Sbjct: 102 HNVSSVSIMP--NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA 159

Query: 161 SGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMG 220
           S S+D T+R                   +                               
Sbjct: 160 SCSNDQTVRVWV--------VATKECKAEL------------------REHRHVVECISW 193

Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
                  +                  ++SG RD TIK+WD  +  C+  L GH   V  +
Sbjct: 194 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253

Query: 281 QY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSI 336
            +    + I+S + D T+RVWD      + TL  H   V  L F      +VT S D+++
Sbjct: 254 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTV 313

Query: 337 AVWD 340
            VW+
Sbjct: 314 KVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (94), Expect = 2e-04
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 431 RVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
             L GH   V  + F      +VS + D  IKVW+ 
Sbjct: 11  YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY 46

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  115 bits (287), Expect = 3e-29
 Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 12/278 (4%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDE 173
           D + +VSAS D  + +W++ +   V  +      +    Y      V+    + I     
Sbjct: 66  DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
            +    +   +  +     Y               SG +    W +              
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGS 291
                 L  D    VSG  D + K+WD     C +  TGH   +  + +  +     +GS
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245

Query: 292 SDSTVRV--WDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI 347
            D+T R+     +   M  +  +    +  + FS    +++    D +  VWD +  +  
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305

Query: 348 TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN 383
               VL GH   V+ +    D   + + S D  +K+WN
Sbjct: 306 ---GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  114 bits (285), Expect = 7e-29
 Identities = 53/294 (18%), Positives = 99/294 (33%), Gaps = 12/294 (4%)

Query: 140 RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYR--DEFQIVSSSHDDTILIWDFLNYSE 195
           RTL GH   I  + +    RL+VS S D  +          V +    +  +     Y+ 
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMT-CAYAP 107

Query: 196 TPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT 255
           +      GG                  + + +   +        L  +     SG     
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167

Query: 256 IKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE 315
           +   +                 L L  D R+ +SG+ D++ ++WDV  G    T   H  
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227

Query: 316 AVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
            +  + F        T S D +  ++D+ +  E+            +  V F    + ++
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELM-TYSHDNIICGITSVSFSKSGRLLL 286

Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
           +   D    VW+    +    L GH   ++CL        V +GS D+ +++W+
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 94.0 bits (232), Expect = 1e-21
 Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 10/213 (4%)

Query: 261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL 318
           R+ ++  + L GH   +  + +  D R+++S S D  + +WD  T   V+ +      V+
Sbjct: 42  RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101

Query: 319 HLRFSNG----MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSAS 374
              ++               SI        N    R +             D+  IV++S
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSS 161

Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGSSDNTIRLWDIECGACLRV 432
           GD T  +W+  + +   T  GH   +    L    RL VSG+ D + +LWD+  G C + 
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221

Query: 433 LEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
             GHE  +  I F  +     +G+ D   ++++
Sbjct: 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFD 254

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 90.6 bits (223), Expect = 1e-20
 Identities = 40/244 (16%), Positives = 72/244 (29%), Gaps = 52/244 (21%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
             +    ++ + +QI       +           T        D +SL    D +  VS 
Sbjct: 143 TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202

Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRDEFQIVSSS 180
           + D + K+W+       +T  GH+  I  + +        +GS D T R           
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL---------- 252

Query: 181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCL 240
                                               + +                G+  +
Sbjct: 253 ------------------------------------FDLRADQELMTYSHDNIICGITSV 276

Query: 241 QY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTV 296
            +      +++G  D    VWD +      VL GH   V CL    D   + +GS DS +
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336

Query: 297 RVWD 300
           ++W+
Sbjct: 337 KIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (118), Expect = 3e-07
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
            D V   ++  RR L GH A +  + +  D + +VSAS D  + +W++ +   V  +   
Sbjct: 37  IDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR 96

Query: 397 KRGIACLQY 405
              +    Y
Sbjct: 97  SSWVMTCAY 105

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (260), Expect = 2e-25
 Identities = 58/353 (16%), Positives = 125/353 (35%), Gaps = 23/353 (6%)

Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
           F++ Y+++ + D+ I+V+++ + +F+  L+GH  G+  L+Y        +          
Sbjct: 21  FEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY--------AHGGI------ 66

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
             +VS S D T+ +WD      T +  G              N +      +        
Sbjct: 67  --LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
                 +     +    L  +T +         + VL GH  SV  +     +++SGS D
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENP----YFVGVLRGHMASVRTVSGHGNIVVSGSYD 180

Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL 353
           +T+ VWDV   + +  L  H + +    + +      S      +      N   +  + 
Sbjct: 181 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 240

Query: 354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSG 413
                   +   D+  + +A+                   + +   I      D ++VSG
Sbjct: 241 GHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG 300

Query: 414 SSDNTIRLWDIECGACLRV-LEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNL 464
            S+N   ++++  G  +   +    + +  + F  K  + +   DG+  +  L
Sbjct: 301 -SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.6 bits (176), Expect = 2e-14
 Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 25/220 (11%)

Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ 281
           F+ QR   R   +  + CLQ++D+ +++G  D  I+V+D ++ + +  L+GH G V  L+
Sbjct: 1   FVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 60

Query: 282 Y-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM----VTCSKDRSI 336
           Y    +++SGS+D TVRVWD+  G   +    H   V  L           VT S+D ++
Sbjct: 61  YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120

Query: 337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH 396
            VW +   + +                               +      +  FV  L GH
Sbjct: 121 HVWKLPKESSVPDHG--------------------EEHDYPLVFHTPEENPYFVGVLRGH 160

Query: 397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
              +  +     +VVSGS DNT+ +WD+    CL +L GH
Sbjct: 161 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 200

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.1 bits (141), Expect = 3e-10
 Identities = 31/274 (11%), Positives = 82/274 (29%), Gaps = 21/274 (7%)

Query: 87  MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 146
               +    + +         + ++   + KYIV+ S D T+ VW       V       
Sbjct: 79  WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138

Query: 147 RGIACL------QYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQG 200
                        Y   ++    +           +VS S+D+T+++WD        I  
Sbjct: 139 DYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 198

Query: 201 GGGGGPPPSGPSIENNWRMGKFLLQRI------------NCRSENSKGVYCLQYDDHKIV 248
           G       +    E    +   +   I              +   +        D   + 
Sbjct: 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVS 258

Query: 249 SGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMV- 307
           +    +          +       +  ++      + +++SG S++   ++++ +G++V 
Sbjct: 259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVH 317

Query: 308 NTLIHHCEAVLHLRFS-NGMMVTCSKDRSIAVWD 340
             ++   + +  + F    ++    KD    +  
Sbjct: 318 ANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEI 351

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (119), Expect = 2e-07
 Identities = 12/130 (9%), Positives = 29/130 (22%), Gaps = 17/130 (13%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
                            V             +  +        +  ++   +    I+ +
Sbjct: 240 QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVS 299

Query: 123 SGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDEFQIVSSS 180
             +    ++N  S + V   +      I  + +    LV +   D               
Sbjct: 300 GSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSF----------- 348

Query: 181 HDDTILIWDF 190
               + I DF
Sbjct: 349 ----LEILDF 354

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 432 VLEGHE-ELVRCIRFDAKRIVSGAYDGKIKVWNL 464
            L GH   ++ C++F+   +++GA D  I+V++ 
Sbjct: 7   TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDS 40

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (260), Expect = 3e-25
 Identities = 72/341 (21%), Positives = 124/341 (36%), Gaps = 57/341 (16%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
           D +Y+ +   ++T +V+  S    V  L+         +  +                  
Sbjct: 73  DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSS--------------- 116

Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
              S S D  I    F    +    G        +   +   W +    +  I    E  
Sbjct: 117 ---SPSSDLYIRSVCFSPDGKFLATG--------AEDRLIRIWDIENRKIVMILQGHEQD 165

Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGSS 292
                      K+VSG  D T+++WD  + QC   L+   G           + I +GS 
Sbjct: 166 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 225

Query: 293 DSTVRVWDVNTGEMVNTLIH-------HCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVS 343
           D  VRVWD  TG +V  L         H ++V  + F+     +V+ S DRS+ +W++ +
Sbjct: 226 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 285

Query: 344 PNEI---------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT 392
            N           T     +GH+  V  V    +++YI+S S DR +  W+  S   +  
Sbjct: 286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345

Query: 393 LNGHKRGIACLQYRD--------RLVVSGSSDNTIRLWDIE 425
           L GH+  +  +   +         +  +GS D   R+W  +
Sbjct: 346 LQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (259), Expect = 5e-25
 Identities = 75/385 (19%), Positives = 141/385 (36%), Gaps = 69/385 (17%)

Query: 119 IVSASGDRTIKVWNTSS-----CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
            +    +    ++N +       E  ++L  H   + C+++        S+D        
Sbjct: 31  ALKKQTNDYYILYNPALPREIDVELHKSL-DHTSVVCCVKF--------SNDG------- 74

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
            + +++  + T  ++   + S                                 +    +
Sbjct: 75  -EYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPEN-------------LNTSSSPSS 120

Query: 234 SKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIIS 289
              +  + +  D   + +G  D  I++WD  + + + +L GH   +  L Y      ++S
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180

Query: 290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI 347
           GS D TVR+WD+ TG+   TL                  +   S DR++ VWD  +   +
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240

Query: 348 ----TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS------------SCEF 389
               +      GH+ +V  V F  D + +VS S DR++K+WN              S   
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300

Query: 390 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 445
             T  GHK  +  +     D  ++SGS D  +  WD + G  L +L+GH   V  +    
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 360

Query: 446 ------DAKRIVSGAYDGKIKVWNL 464
                 +     +G+ D K ++W  
Sbjct: 361 GSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.8 bits (182), Expect = 3e-15
 Identities = 41/240 (17%), Positives = 81/240 (33%), Gaps = 25/240 (10%)

Query: 87  MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNT--SSCEFVRTLNG 144
                       +    ++D  SL        +VS SGDRT+++W+     C    ++  
Sbjct: 146 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED 205

Query: 145 HKRGIACLQYRDRLVVSGSSDNTIRYRD-----------EFQIVSSSHDDTILIWDFLNY 193
               +A      + + +GS D  +R  D                 + H D++    F   
Sbjct: 206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 265

Query: 194 SETPIQGGGGG----GPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVS 249
            ++ + G            +  +  ++        +      ++         +D  I+S
Sbjct: 266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILS 325

Query: 250 GLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--------DERVIISGSSDSTVRVWDV 301
           G +D  +  WD+ S   + +L GH  SV+ +          +  V  +GS D   R+W  
Sbjct: 326 GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.1 bits (149), Expect = 5e-11
 Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 9/113 (7%)

Query: 78  DFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE 137
           +             +           +   +S+    +++YI+S S DR +  W+  S  
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341

Query: 138 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF 190
            +  L GH+  +  +   +   +           +     + S D    IW +
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLG---------PEYNVFATGSGDCKARIWKY 385

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 91.3 bits (225), Expect = 8e-21
 Identities = 31/366 (8%), Positives = 84/366 (22%), Gaps = 68/366 (18%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK----RGIACLQYRDRLVVSGSSDNTIRY 170
             +Y++  +    + V + +S    ++                      V  +    I  
Sbjct: 7   GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66

Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230
                       D     +  + + + + G  G        S +                
Sbjct: 67  I-----------DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE------------- 102

Query: 231 SENSKGVYCLQYDDHKI--VSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLCLQYDE 284
                 VY       ++     ++   ++V+        K +          ++    D 
Sbjct: 103 ------VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156

Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHH--CEAVLHLRFSNGMMVTCSKDRSIAVWDMV 342
            + ++G         DV TG+    L                      S     ++   +
Sbjct: 157 SLYVAGPDI---YKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI 213

Query: 343 SPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG--I 400
           +                      D++   +A         +  + +              
Sbjct: 214 AR------------------FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYF 255

Query: 401 ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGK 458
             L+            N +  +D++    ++     +    C+ F     ++  G     
Sbjct: 256 TGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND 314

Query: 459 IKVWNL 464
           + V+N 
Sbjct: 315 LAVFNP 320

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 57.8 bits (138), Expect = 1e-09
 Identities = 18/216 (8%), Positives = 46/216 (21%), Gaps = 23/216 (10%)

Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKRG----IACLQYRDRLVVSGSSDNTIRYRDE 173
                     ++V++T+     + +          +        L V+G     +  +  
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTG 173

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGG------------------PPPSGPSIEN 215
              V+    +                                                  
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233

Query: 216 NWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL-TGHT 274
           +  +                    L+            N +  +D    + IK     HT
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT 293

Query: 275 GSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
              +        +  G + + + V++ +T E V  +
Sbjct: 294 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 90.3 bits (222), Expect = 3e-20
 Identities = 50/392 (12%), Positives = 114/392 (29%), Gaps = 67/392 (17%)

Query: 114 FDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
               + VS SGD  +KVW+    +     +        +       V           + 
Sbjct: 22  ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH--FVHKSGLHHVDVLQAIERDAFEL 79

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
             + ++S    +L +      ET            S     + W +              
Sbjct: 80  CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL-------------- 125

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ------------------CIKVLTGHTG 275
             G    +   H++V+     T  +W                         ++     + 
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185

Query: 276 SVLCLQY-DERVIISGSSDSTVRV------WDVNTGEMVNTLIHHCEAVLHLRFSNG--M 326
               +   +  +I +G ++ TV++        +   E  +++I++  ++  ++FS    +
Sbjct: 186 FATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 245

Query: 327 MVTCSKDRSIAVWDM-------------VSPNEITLRRVLVGHRAAVNVVDF--DEKYIV 371
           +       S     +             V  +          H + V  + F    + + 
Sbjct: 246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 305

Query: 372 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE-CGACL 430
           SA  D  ++ W+  + E + TLN H   I   +    +   G S     ++D++      
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 365

Query: 431 RVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW 462
           R   G +          + +     D  I+ +
Sbjct: 366 RSGMGAD--------LNESLCCVCLDRSIRWF 389

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 74.9 bits (182), Expect = 4e-15
 Identities = 32/318 (10%), Positives = 80/318 (25%), Gaps = 74/318 (23%)

Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD------RVSLQCIKVLTGHT 274
           K  +   N    +   ++ +   +   VS   D  +KVWD                  H 
Sbjct: 1   KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK 60

Query: 275 GSVLCL---------QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG 325
             +  +          ++  ++ + S    +  + +   +    +I     +L       
Sbjct: 61  SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH 120

Query: 326 -----------------MMVTCSKDRSIAVWDMVSPNEIT---------------LRRVL 353
                             +V      +  +W      + +                    
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180

Query: 354 VGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ-------- 404
           +        VD  +   I +   + T+++   S+   +         I            
Sbjct: 181 MTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 240

Query: 405 YRDRLVVSGSSDNTI---RLWDIECGACLRVLEGHEELVRCIRF---------------D 446
            +  L+      N+     L++ E G  +  L       +                    
Sbjct: 241 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 300

Query: 447 AKRIVSGAYDGKIKVWNL 464
            + + S  +DGK++ W++
Sbjct: 301 GETLCSAGWDGKLRFWDV 318

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.8 bits (148), Expect = 6e-11
 Identities = 36/273 (13%), Positives = 78/273 (28%), Gaps = 21/273 (7%)

Query: 117 KYIVSASGDRTIKVWNT-SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSD-NTIRYRDEF 174
             +V+     T  +W      +   +L  +      LQ      ++ S    ++   +  
Sbjct: 137 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG 196

Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
            I +  ++ T+ I +                   S                 +    +++
Sbjct: 197 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS---IRSVKFSPQGSLLAIAHDSN 253

Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS 292
                  Y+                   S Q       H+  V+ L +      + S   
Sbjct: 254 SFGCITLYETEFG----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 309

Query: 293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV 352
           D  +R WDV T E + TL  HC+ +        +           V+D        ++ +
Sbjct: 310 DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD--------VKFL 361

Query: 353 LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTS 385
             G R+ +       + +     DR+I+ +  +
Sbjct: 362 KKGWRSGMG--ADLNESLCCVCLDRSIRWFREA 392

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 89.5 bits (220), Expect = 4e-20
 Identities = 35/347 (10%), Positives = 92/347 (26%), Gaps = 37/347 (10%)

Query: 113 NFDEKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 168
           N D   I     +  + ++    +    V  L  H   +  + +      +V+  +D   
Sbjct: 16  NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 75

Query: 169 RYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRIN 228
                           + I                     S       +          +
Sbjct: 76  YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 135

Query: 229 CRSENSKGVYCLQYDDHKIVSGL--RDNTIKVWDRVSLQ------------------CIK 268
            +      V  L +  + ++      D   +++     +                   + 
Sbjct: 136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMF 195

Query: 269 VLTGHTGSVLCL--QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NG 325
             +   G V  +    +   +   S DSTV + D +    V TL      +L + F    
Sbjct: 196 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255

Query: 326 MMVTCSKDRSIAVWDM-VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNT 384
            +V    D    ++    +  +++    L   + +        +     + D+      +
Sbjct: 256 SLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF--QNLDKKASSEGS 313

Query: 385 SSCEFVRTLNGHKRGIACL------QYRDRLVVSGSSDNTIRLWDIE 425
           ++       + HK  ++ +      + +     +   D  + +WD+ 
Sbjct: 314 AAAG-AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.2 bits (131), Expect = 6e-09
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 13/172 (7%)

Query: 271 TGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG--EMVNTLIHHCEAVLHLRFS--N 324
           +     + C  +  D   I    ++  V +++ +      V+ L  H   V  + ++  +
Sbjct: 4   SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWN 383
             +VTC  DR+  VW +          +L  +RAA  V    +EK     SG R I +  
Sbjct: 64  NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123

Query: 384 TSSCEFVRTLNGHKRGI------ACLQYRDRLVVSGSSDNTIRLWDIECGAC 429
                        K+ I              L+ +GS D   R++       
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.4 bits (108), Expect = 5e-06
 Identities = 31/235 (13%), Positives = 60/235 (25%), Gaps = 40/235 (17%)

Query: 71  WSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKV 130
           +S   +        +            +           +  + +   +   S D T+ +
Sbjct: 168 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL 227

Query: 131 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDF 190
            +      V TL                         + +  E  +V++ HD   +++ +
Sbjct: 228 ADADKKMAVATLASE----------------TLPLLAVTFITESSLVAAGHDCFPVLFTY 271

Query: 191 LNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSG 250
            +         GG    P   S        +F        SE S          HK    
Sbjct: 272 DS--AAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHK---- 325

Query: 251 LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE 305
              N++          I VL+G                +   D  + +WDV + E
Sbjct: 326 ---NSV--------SQISVLSGGKAKC-------SQFCTTGMDGGMSIWDVRSLE 362

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 87.0 bits (214), Expect = 3e-19
 Identities = 22/334 (6%), Positives = 63/334 (18%), Gaps = 61/334 (18%)

Query: 171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230
           R     + +    T   W         +    G     +                     
Sbjct: 32  RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAG------------------ 73

Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ--------- 281
             +            +   G R + ++V+D V+   I  +         +          
Sbjct: 74  -HSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132

Query: 282 -YDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
                ++      S      V                +H   +       S   S+A  D
Sbjct: 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPG-AAATHYLGSCPASLAASD 191

Query: 341 MVSPNEITLRR---VLVGHRAAVNVV--DFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG 395
           + +                  +      ++    + + +          +       ++G
Sbjct: 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDG 251

Query: 396 H---------------------KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
           +                           +   +      ++           G     + 
Sbjct: 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS 311

Query: 435 GHEELVRCIRF--DAKR--IVSGAYDGKIKVWNL 464
              +    I    D       + A    + +++ 
Sbjct: 312 NGHD-SDAIIAAQDGASDNYANSAGTEVLDIYDA 344

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 71.5 bits (174), Expect = 4e-14
 Identities = 22/346 (6%), Positives = 59/346 (17%), Gaps = 64/346 (18%)

Query: 121 SASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF--QIVS 178
             +G     V        +    G         +    V   S  +          +   
Sbjct: 41  YFAGTTENWVSCAGCGVTLGHSLGA--------FLSLAVAGHSG-SDFALASTSFARSAK 91

Query: 179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY 238
               D + ++D                 P +   + +  R        I     +S  + 
Sbjct: 92  GKRTDYVEVFD------------PVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLL 139

Query: 239 CLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRV 298
                          +             ++    +   +           GS  +++  
Sbjct: 140 ---------FFLFGSSAAAGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLAA 189

Query: 299 WDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCS--------KDRSIAVWDMVSPNEITLR 350
            D+        ++           S                                   
Sbjct: 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAI 249

Query: 351 RVLVGHRAAVN------------------VVDFDEKYIVSASGDRTIKVWNTSSCEFVRT 392
                 R A N                  ++   E      +          S  +    
Sbjct: 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309

Query: 393 LNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLE 434
           +  +      +            + +    + ++D         +E
Sbjct: 310 I-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 58.8 bits (141), Expect = 4e-10
 Identities = 13/223 (5%), Positives = 39/223 (17%), Gaps = 26/223 (11%)

Query: 113 NFDEKYI-VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRY- 170
                 +     G       +       +                     GS   ++   
Sbjct: 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA-SCFHIHPGAAATHYLGSCPASLAAS 190

Query: 171 --RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRIN 228
                               +  + +      G       S     +    G  +   I+
Sbjct: 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAID 250

Query: 229 CRSE------------------NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL 270
                                  +     +   +H                   Q    +
Sbjct: 251 GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI 310

Query: 271 -TGHTGSVLCLQYDER--VIISGSSDSTVRVWDVNTGEMVNTL 310
             GH    +    D       + +    + ++D  + +  +++
Sbjct: 311 SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.0 bits (87), Expect = 0.002
 Identities = 12/181 (6%), Positives = 36/181 (19%), Gaps = 33/181 (18%)

Query: 106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIA--CLQYRDRLVVSGS 163
              +   N+    + + +          +       ++G++ G      +     +V+  
Sbjct: 213 SSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272

Query: 164 SDNTIRY--RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGK 221
            +         E      +  +            +     G               + G 
Sbjct: 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIA---AQDGA 326

Query: 222 FLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVL-TGHTGSVLCL 280
                                      +      + ++D  S Q    +        L +
Sbjct: 327 SDN----------------------YANSAGTEVLDIYDAASDQDQSSVELDKGPESLSV 364

Query: 281 Q 281
           Q
Sbjct: 365 Q 365

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 79.8 bits (195), Expect = 6e-17
 Identities = 32/353 (9%), Positives = 72/353 (20%), Gaps = 66/353 (18%)

Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
               +      V +  +   +  ++G              +  + +  +        +I 
Sbjct: 21  PAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFS--------RIA 72

Query: 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV 237
                D + ++D +    T             G                           
Sbjct: 73  RGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT--------------------S 112

Query: 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVR 297
                             + V D       ++L       +              D ++ 
Sbjct: 113 LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHI-FPTAPDTFFMHCRDGSLA 171

Query: 298 VWDVNTGEMVNTL------IHHCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITL 349
                T                   + H  +S   G +V  +    I   D+ S  +   
Sbjct: 172 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS-GDAKF 230

Query: 350 RRVLVGHRAAVNVVDF----------------------DEKYIVSASGDRTIKVWNTSSC 387
              +     A     +                              +  R + V +  + 
Sbjct: 231 LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG 290

Query: 388 EFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGH 436
           E +         I  +      +  L    + D T+ + D E G  LR +   
Sbjct: 291 ERLAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 42.9 bits (99), Expect = 5e-05
 Identities = 7/104 (6%), Positives = 23/104 (22%), Gaps = 10/104 (9%)

Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRG----------IACLQYRDRLVVSGSSDNTI 419
               +      V +  +   +  ++G              IA        +  G   + +
Sbjct: 21  PAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80

Query: 420 RLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN 463
            ++D         +E  +     +               +  + 
Sbjct: 81  EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 79.1 bits (193), Expect = 9e-17
 Identities = 25/325 (7%), Positives = 67/325 (20%), Gaps = 43/325 (13%)

Query: 116 EKYIVSASGDRTIKVWNTSSCEFVRTLNGHK-----RGIACLQYRDRLVVSGSSDNTIRY 170
             YI++ +    + V +T      + +                       + +   ++  
Sbjct: 1   RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60

Query: 171 RD--EFQIVSSSHDDTILIWDFLNYS--------ETPIQGGGGGGPPPSGPSIENNWRMG 220
            D    + +      T        +            I                    + 
Sbjct: 61  IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120

Query: 221 KFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCL 280
                      E  + +  L +             + V D  +   ++     +      
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETY 180

Query: 281 -------------------------QYDERVIISGSSDSTVRVWDVNTGEMVNT-LIHHC 314
                                    + D       +  + +   D+ TGEM    +    
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240

Query: 315 EAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSAS 374
                   +            +  +D+     I  +RV + H      V  D   +    
Sbjct: 241 VFYFSTAVNPAKTRAFGAYNVLESFDLEKNASI--KRVPLPHSYYSVNVSTDGSTVWLGG 298

Query: 375 GDRTIKVWNTSSCEFVRTLNGHKRG 399
               +  ++  + E    ++     
Sbjct: 299 ALGDLAAYDAETLEKKGQVDLPGNA 323

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 57.1 bits (136), Expect = 1e-09
 Identities = 25/284 (8%), Positives = 66/284 (23%), Gaps = 37/284 (13%)

Query: 34  ASPQLPPMTILYDPNRKKEPAPQFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHG 93
            + +      L  P  + +     A   +       +   + ++   E   +R+  Y   
Sbjct: 64  VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123

Query: 94  HINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQ 153
            ++        R    L    D   +     D  +      +    + +   +       
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQP 183

Query: 154 YRDRLVVSGSS------DNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPP 207
               +     S            +D      +++   +L  D         +        
Sbjct: 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFY 243

Query: 208 PSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCI 267
                                         +    +  K  +    N ++ +D      I
Sbjct: 244 ------------------------------FSTAVNPAKTRAFGAYNVLESFDLEKNASI 273

Query: 268 KVL-TGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL 310
           K +   H+   + +  D   +  G +   +  +D  T E    +
Sbjct: 274 KRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 77.2 bits (188), Expect = 3e-16
 Identities = 35/314 (11%), Positives = 71/314 (22%), Gaps = 33/314 (10%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
               I   +G  ++      S         H       +                    +
Sbjct: 28  AGDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKT---------------SPSGY 71

Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
              S      + IWD    +            P    S ++  +    + +         
Sbjct: 72  YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF 131

Query: 235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS 294
                    +    +   ++      R                    +  +      +  
Sbjct: 132 LFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 191

Query: 295 TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLV 354
              V     G +  +       VL+             D    V                
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS------------- 238

Query: 355 GHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG---IACLQYRDRLVV 411
                      D   I SAS D+TIK+WN ++ +  +T+    R       + +  + +V
Sbjct: 239 -GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 297

Query: 412 SGSSDNTIRLWDIE 425
           S S++  I   + E
Sbjct: 298 SISANGFINFVNPE 311

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.8 bits (148), Expect = 3e-11
 Identities = 35/256 (13%), Positives = 70/256 (27%), Gaps = 22/256 (8%)

Query: 231 SENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVS--LQCIKVLTGHTGSVLCL------ 280
           +E+S      +     +   SG     +++WD           +   +G V  +      
Sbjct: 55  TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 114

Query: 281 QYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWD 340
           +    V         V ++D  T     T        +  + S    +    D +     
Sbjct: 115 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF 174

Query: 341 MVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI 400
              P +                 + D     S  GD TI ++N                 
Sbjct: 175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 234

Query: 401 ACLQYR---------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL---VRCIRFDAK 448
                             + S S+D TI++W++      + +     +      I +  +
Sbjct: 235 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 294

Query: 449 RIVSGAYDGKIKVWNL 464
            +VS + +G I   N 
Sbjct: 295 ALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 52.6 bits (124), Expect = 4e-08
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 3/113 (2%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
                    S       V               ++            L  + D   I SA
Sbjct: 197 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 256

Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRG---IACLQYRDRLVVSGSSDNTIRYRD 172
           S D+TIK+WN ++ +  +T+    R       + +  + +VS S++  I + +
Sbjct: 257 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.4 bits (108), Expect = 4e-06
 Identities = 9/75 (12%), Positives = 22/75 (29%), Gaps = 4/75 (5%)

Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAK 448
           RT  G    +      D++     +  ++    +       +   H       +      
Sbjct: 14  RTARGTAVVLGNTPAGDKIQYC--NGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY 71

Query: 449 RIVSGAYDGKIKVWN 463
              SG   G +++W+
Sbjct: 72  YCASGDVHGNVRIWD 86

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.8 bits (96), Expect = 1e-04
 Identities = 22/198 (11%), Positives = 42/198 (21%), Gaps = 28/198 (14%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
                  +                     +        P   +        F      + 
Sbjct: 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNP 199

Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD 182
            G          +      ++G K G+        +  SGS        D  +I S+S D
Sbjct: 200 DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 259

Query: 183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQY 242
            TI IW+                                 + + I   +        + +
Sbjct: 260 KTIKIWNVATLK----------------------------VEKTIPVGTRIEDQQLGIIW 291

Query: 243 DDHKIVSGLRDNTIKVWD 260
               +VS   +  I   +
Sbjct: 292 TKQALVSISANGFINFVN 309

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 76.8 bits (187), Expect = 6e-16
 Identities = 31/345 (8%), Positives = 79/345 (22%), Gaps = 30/345 (8%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD--NTIRY 170
           D   I   S  +   + + S    ++        I  ++     ++     +   + +  
Sbjct: 14  DGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70

Query: 171 RD---EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRI 227
            D           +   +         +  +                    + +     I
Sbjct: 71  YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 130

Query: 228 NCRSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DE 284
              + +    +        H    G     I V+D    +     T ++         D 
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS 190

Query: 285 RVIISGSSDSTVRVWDVNTGEM-------VNTLIHHCEAVLHLRFS------NGMMVTCS 331
           + +   S  S     D                +     +    +               +
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250

Query: 332 KDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEF 389
                +    V P +  +   L       +V        Y   A     +  ++  + + 
Sbjct: 251 DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK- 309

Query: 390 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 434
           V  +  +   +  L    + V+    D  I  + +E     R +E
Sbjct: 310 VTEVKNNLTDLR-LSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 66.0 bits (159), Expect = 2e-12
 Identities = 31/312 (9%), Positives = 70/312 (22%), Gaps = 35/312 (11%)

Query: 115 DEKYIVSASGD--RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRD 172
           D K            + +++  + +  +         A    R+      ++D       
Sbjct: 53  DTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTV 112

Query: 173 EFQIVSSSHDDTILIWDFLNYSETPIQ------GGGGGGPPPSGPSIENNWRMGKFLLQR 226
           + +    +  +        +++ +              G          +    +     
Sbjct: 113 DLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 172

Query: 227 INCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC-------IKVLTGHTGSV-- 277
                 +         D   +      +     DRV L           V+    GS   
Sbjct: 173 AATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNP 232

Query: 278 LCLQYDERVIISGSSDSTVRVW-------DVNTGEMVNTLIHHCEAVLHLRFSNG--MMV 328
             L        +G  D             D     M+  L                    
Sbjct: 233 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292

Query: 329 TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSS 386
              +   +  +D+ +       R +   +  +  +    D K ++    D  I  +    
Sbjct: 293 GAPEKGVLLKYDVKT-------RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345

Query: 387 CEFVRTLNGHKR 398
            E  RT+   KR
Sbjct: 346 PEDERTVETDKR 357

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 60.6 bits (145), Expect = 1e-10
 Identities = 19/260 (7%), Positives = 51/260 (19%), Gaps = 15/260 (5%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
                       + +             +          +             +      
Sbjct: 96  NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 155

Query: 123 SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRYRDEFQIVSSS- 180
              + I V++    +       +    A       + +   S  +     D   +  S  
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215

Query: 181 ----------HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR 230
                        +              + G          S   N   G + +      
Sbjct: 216 VVSKPFVIPLIPGSPNPTKL-VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES 274

Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
           S     V                  +  +D V  + +  +  +   +  L  D + ++  
Sbjct: 275 SILIYSVPVHGEFAAYYQGAPEKGVLLKYD-VKTRKVTEVKNNLTDL-RLSADRKTVMVR 332

Query: 291 SSDSTVRVWDVNTGEMVNTL 310
             D  +  + +   E   T+
Sbjct: 333 KDDGKIYTFPLEKPEDERTV 352

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 51.0 bits (120), Expect = 1e-07
 Identities = 21/237 (8%), Positives = 56/237 (23%), Gaps = 27/237 (11%)

Query: 243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS--TVRV 298
           D   I    R     + D      +KV       +  ++   D +V     +     + +
Sbjct: 14  DGDLIAFVSRG-QAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70

Query: 299 WDVNTGE---------MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL 349
           +D  TG+          V  +         +  ++   +      +     +    E  +
Sbjct: 71  YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 130

Query: 350 RRVLVGHRAAVNV-VDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY-RD 407
               +   +         +         + I V++    +       +    A       
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS 190

Query: 408 RLVVSGSSDNTIRLWDIE-------CGACLRVLEGHEELVRCIRF--DAKRIVSGAY 455
           + +   S  +     D           +   V+          +    +    +G Y
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 37.5 bits (85), Expect = 0.003
 Identities = 18/231 (7%), Positives = 50/231 (21%), Gaps = 12/231 (5%)

Query: 57  FASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDE 116
           F       F  +    +  + D        +   +   I             +   +   
Sbjct: 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD--S 190

Query: 117 KYIVSASGDRTIKVWNTSSCEF-------VRTLNGHKRGIACLQYRDRLVVSGSSDNTIR 169
           K +   S        +     F          +          +   R + S + +  + 
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250

Query: 170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINC 229
              +     +       +   L  S         G              + K+ ++    
Sbjct: 251 DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 310

Query: 230 RSENSKGVYCLQY--DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVL 278
             E    +  L+   D   ++    D  I  +     +  + +      ++
Sbjct: 311 T-EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.8 bits (187), Expect = 6e-16
 Identities = 43/323 (13%), Positives = 82/323 (25%), Gaps = 21/323 (6%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD 172
            +   V    D  I          + TL  H   +  +      R V +G     ++  D
Sbjct: 21  GQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWD 78

Query: 173 ---------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFL 223
                      Q+   + D+ I     L    T I GG            +      +  
Sbjct: 79  ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI----WDLAAPTPRIK 134

Query: 224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD 283
            +  +                        +  +      +L           S + +  D
Sbjct: 135 AELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194

Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVS 343
              + +G  D+TVR WD+               +  L +            S  V  +  
Sbjct: 195 GTKLWTGGLDNTVRSWDLRE-GRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV 253

Query: 344 PNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACL 403
                 +  L           +  K+ VS   D  +  W T     +         +   
Sbjct: 254 NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSC 312

Query: 404 QY--RDRLVVSGSSDNTIRLWDI 424
                D+ +V+GS D    ++++
Sbjct: 313 DISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 27/277 (9%), Positives = 56/277 (20%), Gaps = 51/277 (18%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTL-----NGHKRGIACLQYR--DRLVVSGSSDNT 167
             +++ +      +KVW+ S       +           I   +       ++ G   +T
Sbjct: 62  PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120

Query: 168 IRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRI 227
           +   D          +                          G     +      + Q  
Sbjct: 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180

Query: 228 NCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV---------- 277
                 S                                    T    S+          
Sbjct: 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA 240

Query: 278 ------------------------------LCLQYDERVIISGSSDSTVRVWDVNTGEMV 307
                                         L   Y  +  +S   D+ +  W    G  +
Sbjct: 241 VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300

Query: 308 NTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMV 342
                   +VL    S  +  +VT S D+   V++++
Sbjct: 301 FQSKES-SSVLSCDISVDDKYIVTGSGDKKATVYEVI 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 6e-09
 Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 3/101 (2%)

Query: 71  WSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKV 130
           +    +   V    S +        + Y   + +   +SL   +  K+ VS   D  +  
Sbjct: 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNA 291

Query: 131 WNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIR 169
           W T     +         +        D+ +V+GS D    
Sbjct: 292 WRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKAT 331

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 11/107 (10%)

Query: 366 DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWD 423
            +   V    D  I          + TL  H   +  +      R V +G     +++WD
Sbjct: 21  GQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWD 78

Query: 424 IECGACLRVLE-----GHEELVRCIRF--DAKRIVSGAYDGKIKVWN 463
           I        +        +  +R  +   D   ++ G     + +W+
Sbjct: 79  ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.4 bits (186), Expect = 7e-16
 Identities = 32/318 (10%), Positives = 90/318 (28%), Gaps = 38/318 (11%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTL---NGHKRGIACLQY---RDRLVVSGSSDNTI 168
            +  ++  S D ++ V+          L     +K  + C  +    D  +  G+    I
Sbjct: 22  SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81

Query: 169 R---YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQ 225
                       + ++++  L    +                       N       +  
Sbjct: 82  LKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKN 141

Query: 226 RINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSV------LC 279
             +  ++    ++ +  +  +++ G+ ++ ++ +     +        +G          
Sbjct: 142 LNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201

Query: 280 LQYDERVIISGSSDSTVRVWDVNTGE---------------MVNTLIHHCEAVLHLRFSN 324
           L  ++      S D  V V   +                  +     +    V  + FS 
Sbjct: 202 LPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261

Query: 325 GMM--VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW 382
                 T   D  I+ W++ +  +  ++     +  +V  +   +  +  A+ D T K  
Sbjct: 262 RHKFLYTAGSDGIISCWNLQTRKK--IKNFAKFNEDSVVKIACSDNILCLATSDDTFKTN 319

Query: 383 NTSSCEFVRTLNGHKRGI 400
                   +T+  +   I
Sbjct: 320 AAID----QTIELNASSI 333

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.5 bits (168), Expect = 1e-13
 Identities = 21/223 (9%), Positives = 70/223 (31%), Gaps = 22/223 (9%)

Query: 264 LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH---HCEAVL 318
           +Q +++       +  ++    + +++  S D ++ V+  +       L+    +   +L
Sbjct: 1   MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60

Query: 319 HLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASG 375
              F    +  +   +    I   D++             +     +  + +  +++AS 
Sbjct: 61  CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120

Query: 376 DRTIKVWNTSSCEFVRTLNGHKRGI--------ACLQYRDRLVVSGSSDNTIRLWDIECG 427
           D  I+V +  +         +              +      ++ G +++ ++ + +   
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180

Query: 428 ACLRVLEGHEELVRCIRF------DAKRIVSGAYDGKIKVWNL 464
                      L   IR       + +     + DG++ V   
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.6 bits (163), Expect = 7e-13
 Identities = 38/347 (10%), Positives = 88/347 (25%), Gaps = 48/347 (13%)

Query: 139 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRYRD-------EFQIVSSSHDDTILIWD 189
           V+     K  I+ ++      L++  S D ++              + S  +   +L  +
Sbjct: 4   VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 190 FLNYSETPIQGGGGGGPPPSGP--SIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKI 247
           F++ ++  I  G   G           +   +         CR         +      +
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123

Query: 248 VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMV 307
           +  +                   T     +  +  +   +I G ++S V+ + +   E  
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183

Query: 308 NTLIHHCEAVLHLRF------SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
           N  I        +R               S D  +AV       +               
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY------------- 230

Query: 362 VVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 419
                           + K +                 +  +++  R + + +  SD  I
Sbjct: 231 ---------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275

Query: 420 RLWDIECGACLRVLEGHEEL-VRCIRFDAKRIVSGAYDGKIKVWNLV 465
             W+++    ++      E  V  I      +     D   K    +
Sbjct: 276 SCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAI 322

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.5 bits (124), Expect = 5e-08
 Identities = 15/162 (9%), Positives = 51/162 (31%), Gaps = 16/162 (9%)

Query: 215 NNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKV----- 269
                G     R        +  Y     D ++     D+    ++       +      
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245

Query: 270 -LTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLRFSNG 325
             T     V  +++    + + +  SD  +  W++ T + +      + ++V+ +  S+ 
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDN 305

Query: 326 MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDE 367
           ++   + D +      +          +  + +++ ++   E
Sbjct: 306 ILCLATSDDTFKTNAAIDQT-------IELNASSIYIIFDYE 340

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.3 bits (100), Expect = 4e-05
 Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNT 167
           S+  +   K++ +A  D  I  WN  + + ++     ++  +  +   D ++   +SD+T
Sbjct: 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDT 315

Query: 168 IRYRDEFQIVSSSHDDTILIWD 189
            +           +  +I I  
Sbjct: 316 FKTNAAIDQTIELNASSIYIIF 337

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 75.4 bits (183), Expect = 1e-15
 Identities = 42/276 (15%), Positives = 72/276 (26%), Gaps = 5/276 (1%)

Query: 115 DEKYIVSASGDRTIKVWNTSSCEFVRTL-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDE 173
           D K + SA  +  I  W+ S+    R   + H   I  ++   +  +   S +       
Sbjct: 23  DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVP 82

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
                      +            +   G          I          +      S  
Sbjct: 83  AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 142

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
           +              S +    +       ++ I      T           V    S  
Sbjct: 143 ALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRK 202

Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSN---GMMVTCSKDRSIAVWDMVSPNEITLR 350
                   N             A +     +     + T S D S+ VW+M  P++  + 
Sbjct: 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262

Query: 351 RVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTS 385
                  ++VN V + +E  IVSA  D  IK WN  
Sbjct: 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 63.9 bits (153), Expect = 7e-12
 Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 25/302 (8%)

Query: 139 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRD-----EFQIVSSSHDDTILIWDFL 191
            +   GH + I  L      + + S  ++  I   D       ++    H   I      
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 192 NYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL 251
           +  +             S          G   +      +                   +
Sbjct: 65  SKGDLFTV---------SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 115

Query: 252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI 311
                 +      +  +V   +  S + L  D++ +  G  DS V V+ ++   +     
Sbjct: 116 AACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT 175

Query: 312 HHCEA-----VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFD 366
               A           +  +    S+               T        + A      D
Sbjct: 176 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 235

Query: 367 EKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLW 422
              + + S D ++ VWN    S   +     H      + +   +  +VS   D+ I+ W
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295

Query: 423 DI 424
           ++
Sbjct: 296 NV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 58.8 bits (140), Expect = 4e-10
 Identities = 17/145 (11%), Positives = 46/145 (31%), Gaps = 4/145 (2%)

Query: 265 QCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLR 321
              +V  GH  ++  L    D + + S  ++  +  WD++TG         H   +  ++
Sbjct: 3   SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62

Query: 322 FSNGMMV-TCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIK 380
            ++   + T S D  + V         + + V     +    +       ++ +      
Sbjct: 63  TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122

Query: 381 VWNTSSCEFVRTLNGHKRGIACLQY 405
              +        ++ +   +A    
Sbjct: 123 AIYSHGKLTEVPISYNSSCVALSND 147

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 52.3 bits (123), Expect = 5e-08
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 390 VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF 445
            +   GH + I  L      + + S  ++  I  WDI  G   RV  + H  ++  I+ 
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.1 bits (107), Expect = 5e-06
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 427 GACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL 464
           G+  +V  GH + +  +    D K + S   +G I  W++
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI 41

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.6 bits (90), Expect = 6e-04
 Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 304 GEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN 361
           G +      H +A+  L  S     + +   +  I  WD+ +      R     H   + 
Sbjct: 2   GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS--NRVFPDVHATMIT 59

Query: 362 VVDFDEKY-IVSASGDRTIKVWNTSSCE 388
            +    K  + + S D  +KV       
Sbjct: 60  GIKTTSKGDLFTVSWDDHLKVVPAGGSG 87

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 39.2 bits (89), Expect = 7e-04
 Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 4/118 (3%)

Query: 56  QFASEKEMCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFD 115
                +     + +  +     D    ++           +T            +  + D
Sbjct: 176 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 235

Query: 116 EKYIVSASGDRTIKVWN--TSSCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIR 169
              + + S D ++ VWN    S   +     H      + +   +  +VS   D+ I+
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.8 bits (179), Expect = 3e-15
 Identities = 38/290 (13%), Positives = 83/290 (28%), Gaps = 9/290 (3%)

Query: 137 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSET 196
           E ++T++GH +GI  L      ++SGS D  I         S   D + LI    N    
Sbjct: 4   EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWS---SSSMHQDHSNLIVSLDNSKAQ 58

Query: 197 PIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI 256
                            ++ +     +    N                      +  +  
Sbjct: 59  EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 118

Query: 257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA 316
                 ++   +                ++     S             +  +      A
Sbjct: 119 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178

Query: 317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD 376
              +     +    S++   + W   +     +        A     + +E  + + S D
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE--EEIEEDLVATGSLD 236

Query: 377 RTIKVWNTSS-CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDI 424
             I +++     + ++ LN HK G+  L +     +VS  +D  I+ W++
Sbjct: 237 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.4 bits (165), Expect = 2e-13
 Identities = 36/269 (13%), Positives = 73/269 (27%), Gaps = 11/269 (4%)

Query: 119 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS 178
           ++S S D  I  W++SS         H   I  L        S  S +     +      
Sbjct: 24  LISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE 78

Query: 179 SSHDDTILIWDFLNY---SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSK 235
                 +   +   +                             G  +    N  +   +
Sbjct: 79  FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLE 138

Query: 236 GVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDST 295
               +Q      +    D    +  + S   I     +  +   +       +      T
Sbjct: 139 EGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT 198

Query: 296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG 355
            R     +     +     +          ++ T S D +I ++ +  P +  + + L  
Sbjct: 199 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK--IIKALNA 256

Query: 356 HRAAVNVVDF-DEKYIVSASGDRTIKVWN 383
           H+  VN + +     +VS+  D  IK WN
Sbjct: 257 HKDGVNNLLWETPSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.5 bits (121), Expect = 7e-08
 Identities = 14/109 (12%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 63  MCFKYFDKWSEQDQIDFVENLLSRMCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSA 122
             +        +  +  +++   +   +               +  +     +E  + + 
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233

Query: 123 SGDRTIKVWNTSS-CEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIR 169
           S D  I +++     + ++ LN HK G+  L +     +VS  +D  I+
Sbjct: 234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIK 282

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 1e-06
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 7/76 (9%)

Query: 388 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDA 447
           E ++T++GH +GI  L      ++SGS D  I  W           + H  L+  +    
Sbjct: 4   EVLKTISGHNKGITALTVNP--LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSK 56

Query: 448 KRIVSGAYDGKIKVWN 463
            +  S          N
Sbjct: 57  AQEYSSISWDDTLKVN 72

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.9 bits (96), Expect = 1e-04
 Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 429 CLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNL 464
            L+ + GH + +  +  +   ++SG+YDG+I  W+ 
Sbjct: 5   VLKTISGHNKGITALTVN--PLISGSYDGRIMEWSS 38

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.5 bits (160), Expect = 1e-12
 Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 32/265 (12%)

Query: 232 ENSKGVYCLQY----DDHKIVSGLRDNTIKVWDRVSLQCIKVL--------TGHTGSVLC 279
             S  V  +++        + SG     + VW     +    +            G +  
Sbjct: 61  HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISD 120

Query: 280 LQYD----ERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMM---VTCSK 332
           + +D       ++    D+       ++G  +  +  H + +             +T   
Sbjct: 121 ISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 180

Query: 333 DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW--------NT 384
           D S+  +           R      + V  V+F            + +            
Sbjct: 181 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 240

Query: 385 SSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR 444
                           A      +   +  +D TIR+WD+    C++     ++ +   +
Sbjct: 241 LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQ 300

Query: 445 F-----DAKRIVSGAYDGKIKVWNL 464
                    RI+S + DG +  + L
Sbjct: 301 VGVVATGNGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.1 bits (146), Expect = 7e-11
 Identities = 29/253 (11%), Positives = 67/253 (26%), Gaps = 23/253 (9%)

Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR 171
           P    +Y+ S      + VW  +  +   ++  + +    +       +S   +      
Sbjct: 73  PIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 132

Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQG------------------GGGGGPPPSGPSI 213
                 +     +    + L       Q                     G      GP  
Sbjct: 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 192

Query: 214 ENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH 273
           + +        Q    R                    +     K  + +           
Sbjct: 193 KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ 252

Query: 274 TGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-----NGMMV 328
            G       D +   +  +D+T+RVWDV T + V       + + + +       NG ++
Sbjct: 253 GGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 312

Query: 329 TCSKDRSIAVWDM 341
           + S D ++  +++
Sbjct: 313 SLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.5 bits (129), Expect = 8e-09
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 87  MCHYQHGHINTYLKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK 146
                             +  I  L   D +   +   D TI+VW+ ++ + V+     K
Sbjct: 234 DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293

Query: 147 RGIACLQYR-----DRLVVSGSSDNTIRYRD 172
           + +   Q       +  ++S S D T+ + +
Sbjct: 294 QQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 8e-04
 Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 7/117 (5%)

Query: 317 VLHLRFS---NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF----DEKY 369
             HL +    N +   C K   +   D        + +      + V  V F      +Y
Sbjct: 20  TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79

Query: 370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIEC 426
           + S      + VW  +  +   ++  + +    +       +S   +        E 
Sbjct: 80  LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (87), Expect = 0.001
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 7/81 (8%)

Query: 391 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHE-ELVRCIRF-- 445
            T       ++     + +         +R  D        +    GH   +V  ++F  
Sbjct: 14  STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73

Query: 446 --DAKRIVSGAYDGKIKVWNL 464
              ++ + SG   GK+ VW  
Sbjct: 74  IKGSQYLCSGDESGKVIVWGW 94

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 65.6 bits (159), Expect = 4e-12
 Identities = 50/391 (12%), Positives = 89/391 (22%), Gaps = 81/391 (20%)

Query: 118 YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDRLVVSGSSDNTIRYRD---- 172
           + V+      I + + S+ E    L+      I+ L    R +     D  +   D    
Sbjct: 34  FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK 93

Query: 173 ---------------------------EFQIVSSSHDDTILIWDFLNYSETPIQGGGGGG 205
                                      ++ I  +      +I D        IQ   G  
Sbjct: 94  EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153

Query: 206 PPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ 265
                   E                      +    Y    IV+      I + D   L 
Sbjct: 154 YDEQEYHPEPRVA-----------------AILASHYRPEFIVNVKETGKILLVDYTDLN 196

Query: 266 CIKVLTGHTGSVLC---LQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF 322
            +K         L    L    R  I+ ++     V        +  +        H   
Sbjct: 197 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGR 256

Query: 323 SNGMMVT--CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRT 378
               +         +  + D       T       +   +           +   +   +
Sbjct: 257 GANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNS 316

Query: 379 IKVWNTSSCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHE 437
             ++         TLN        +   D + +    SD   +   I   A   + EG  
Sbjct: 317 QYLY------VDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWA--GITEGQ- 367

Query: 438 ELVRCIRFDAKRIVSGAY--DGK---IKVWN 463
                      R+V G +  DG      VWN
Sbjct: 368 ----------PRVVQGEFNKDGTEVWFSVWN 388

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 52.1 bits (124), Expect = 8e-08
 Identities = 18/153 (11%), Positives = 43/153 (28%), Gaps = 15/153 (9%)

Query: 324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWN 383
           N   VT      IA+ D  +  EI    +  G+   ++ +    +Y+     D  + + +
Sbjct: 32  NLFSVTLRDAGQIALIDGST-YEI-KTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMID 89

Query: 384 TSSCE-----FVRTLNGHKRGIACLQYRD----RLVVSGSSDNTIRLWDIECGACLRVLE 434
               E      ++  +   R I   +         +          + D E     ++  
Sbjct: 90  LWMKEPTTVAEIKIGSEA-RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 148

Query: 435 GHEELVRCIRFDAKRIVSGAY---DGKIKVWNL 464
                     +  +  V+           + N+
Sbjct: 149 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 181

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 49.8 bits (118), Expect = 4e-07
 Identities = 17/123 (13%), Positives = 40/123 (32%), Gaps = 11/123 (8%)

Query: 352 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHKR-GIACLQYRDR 408
           V    R    + D+D +  + V+      I + + S+ E    L+      I+ L    R
Sbjct: 15  VAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGR 74

Query: 409 LVVSGSSDNTIRLWDIECG-----ACLRVLEGHEELVRCIRF--DAKR-IVSGAYDGKIK 460
            +     D  + + D+        A +++      +        + K  I    +  +  
Sbjct: 75  YLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 134

Query: 461 VWN 463
           + +
Sbjct: 135 IMD 137

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 61.0 bits (146), Expect = 6e-11
 Identities = 32/282 (11%), Positives = 79/282 (28%), Gaps = 11/282 (3%)

Query: 120 VSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYRDRLVVSGSSDNTIRYRDEFQIV 177
           ++ S    I V + +S +   T+       G        ++ V+ +  N +   D     
Sbjct: 6   IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIID----T 61

Query: 178 SSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV 237
           ++++    +              G          S  +        +       ++  G+
Sbjct: 62  ATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGL 121

Query: 238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG-SVLCLQYDERVIISGSSDSTV 296
                     V+   D T+ V + V+   I  ++       + +  D   +   + DS  
Sbjct: 122 ALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMS 181

Query: 297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRV-LVG 355
                     V   +    A   +  +         +       +   +  T +    + 
Sbjct: 182 ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241

Query: 356 HRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSCEFVRTLN 394
                  +    D K + V+ S   T+ V +T++     T+ 
Sbjct: 242 VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 51.4 bits (121), Expect = 1e-07
 Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 371 VSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGA 428
           ++ S    I V + +S +   T+       G        ++ V+ +  N + + D     
Sbjct: 6   IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65

Query: 429 C 429
            
Sbjct: 66  V 66

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 43.7 bits (101), Expect = 3e-05
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 286 VIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDMV 342
             I+ S    + V DV + ++  T+       +    S     + V  +    +++ D  
Sbjct: 4   AYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTA 62

Query: 343 SPN 345
           + N
Sbjct: 63  TNN 65

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 42.9 bits (99), Expect = 4e-05
 Identities = 6/57 (10%), Positives = 19/57 (33%), Gaps = 4/57 (7%)

Query: 411 VSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKIKVWNL 464
           ++ S  + I + D+        +              D  ++ V+ A+   + + + 
Sbjct: 6   IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDT 61

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 38/301 (12%), Positives = 85/301 (28%), Gaps = 40/301 (13%)

Query: 174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSEN 233
           F  +++S  D I + D  +   T     G     P G  I  +   G  +          
Sbjct: 3   FAYIANSESDNISVIDVTSNKVTATIPVGSN---PMGAVISPD---GTKVY--------- 47

Query: 234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
                         V+    N + + D  +   I  +   +         +   +  ++ 
Sbjct: 48  --------------VANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM 93

Query: 294 --STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR 351
             ST+ V D  +  +  T+      +      +G  +  + +    V  + +  +  +  
Sbjct: 94  ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153

Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG-----HKRGIACLQYR 406
           V VG       V  D   +  A+ D        +    V              +     +
Sbjct: 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTK 213

Query: 407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKIKVWN 463
             +       NT+ + D         +    +    I    D K++ V+ ++   + V +
Sbjct: 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVID 272

Query: 464 L 464
            
Sbjct: 273 T 273

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 53.8 bits (129), Expect = 2e-08
 Identities = 32/260 (12%), Positives = 65/260 (25%), Gaps = 48/260 (18%)

Query: 247 IVSGLRDNTIKVWDRVSLQCIKVLT---------------GHTGSVLC-------LQYDE 284
            ++   +  +       ++  K+                   T  V C          D 
Sbjct: 87  FINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDG 146

Query: 285 RVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS---NGMMVTCSKDRSIAVWDM 341
                 +S +     D  T ++   +I     + +            TC           
Sbjct: 147 TDFSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAG 205

Query: 342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKR--G 399
              N+     V+V +   +        +       +   V      EF R +   K   G
Sbjct: 206 TMRNDR--DWVVVFNVERIAAAVKAGNFKT-IGDSKVPVVDGRGESEFTRYIPVPKNPHG 262

Query: 400 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-------------RFD 446
           +         + +G    T+ +  I+      + E   EL   I              FD
Sbjct: 263 LNTSPDGKYFIANGKLSPTVSVIAID--KLDDLFEDKIELRDTIVAEPELGLGPLHTTFD 320

Query: 447 AK--RIVSGAYDGKIKVWNL 464
            +     +   D ++  WN+
Sbjct: 321 GRGNAYTTLFIDSQVCKWNI 340

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 38/318 (11%), Positives = 84/318 (26%), Gaps = 53/318 (16%)

Query: 115 DEKYI-VSASGDRTIKVWNTSSCEFVRTL---NGHK-RGIACLQYRDRLVVSGSSDNTIR 169
           D KY+ ++   +  +        +  +     N     G+   +      V  +++  I 
Sbjct: 82  DGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIP 141

Query: 170 YRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW----RMGKFLLQ 225
             ++    S  +  T+         +   Q    G    +       +            
Sbjct: 142 QPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAV 201

Query: 226 RINCRSENS----------KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG 275
            +     N           +    ++  + K +         V  R   +  + +     
Sbjct: 202 DLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD--SKVPVVDGRGESEFTRYIPVPKN 259

Query: 276 SVLC--LQYDERVIISGSSDSTVRVWDVNT-GEMVNTLIHHCEAV----------LHLRF 322
                     +  I +G    TV V  ++   ++    I   + +          LH  F
Sbjct: 260 PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTF 319

Query: 323 SNGMMV--TCSKDRSIAVWDMVSPNEI--------TLRRVLV----GHRAAVNVVDF--D 366
                   T   D  +  W++    +           +++ V    GH  A        D
Sbjct: 320 DGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDAD 379

Query: 367 EKYIVSA---SGDRTIKV 381
            K++V     S DR + V
Sbjct: 380 GKWLVVLSKFSKDRFLPV 397

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 25/155 (16%)

Query: 277 VLCLQYDERVI-ISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRS 335
           V   + DE     SG     VRV  V +   +  +      V +    +        + S
Sbjct: 3   VAPGELDEYYGFWSGGHQGEVRVLGVPSMRELMRI-----PVFN---VDSATGWGITNES 54

Query: 336 IAVWDMVSPNEITLRRVLVG--HRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSCEFV 390
             +           ++ L G  H   +++ D   D KY+ ++   +  +        +  
Sbjct: 55  KEILG-------GDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTD 107

Query: 391 RTL---NGHK-RGIACLQYRDRLVVSGSSDNTIRL 421
           +     N     G+   +      V  +++  I  
Sbjct: 108 KITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQ 142

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 53.4 bits (127), Expect = 3e-08
 Identities = 52/395 (13%), Positives = 100/395 (25%), Gaps = 83/395 (21%)

Query: 112 PNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYR 171
            +    + V+      I + +  S + V+ ++                +S          
Sbjct: 28  LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHI-------SRMS---------A 71

Query: 172 DEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRS 231
               ++    D  I + D      T +     G    S  S +      ++         
Sbjct: 72  SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYT-------- 123

Query: 232 ENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY---DERVII 288
                          I          + D  +L+  ++++    +V    Y        I
Sbjct: 124 ---------------IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 168

Query: 289 SGSSDSTVRVWDVNTGEMV------------NTLIHHCEAVLHLRFSNG---MMVTCSKD 333
             S +    + +V     V             T I     +    + +     M   +  
Sbjct: 169 IASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNS 228

Query: 334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK----YIVSASGDRTIKVWNTSSC-- 387
             +AV D        L  V               K    +  S  GD +I +  T     
Sbjct: 229 NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH 288

Query: 388 -----EFVRTLNGHKRGIACLQY---RDRLVV------SGSSDNTIRLWDIECGACLRVL 433
                + V  L G   G   ++       L V            ++ ++D++       +
Sbjct: 289 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV 348

Query: 434 EGHEELVRCIRFDAKRIVSGAY--DGK---IKVWN 463
               E    +   AKR+V   Y   G      VWN
Sbjct: 349 LPIAEWAD-LGEGAKRVVQPEYNKRGDEVWFSVWN 382

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.6 bits (117), Expect = 5e-07
 Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 12/123 (9%)

Query: 352 VLVGHRAAVNVVDFDEK--YIVSASGDRTIKVWNTSSCEFVRTLNGHK--RGIACLQYRD 407
           V    R    + D D    + V+      I + +  S + V+ ++          +    
Sbjct: 15  VKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISR-MSASG 73

Query: 408 RLVVSGSSDNTIRLWDIECGACLRVLE-----GHEELVRCIRF--DAKRIVSGAYDGKIK 460
           R ++    D  I + D+      +V E         +        + +  ++GAY     
Sbjct: 74  RYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQF 133

Query: 461 VWN 463
              
Sbjct: 134 AIM 136

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 46.7 bits (109), Expect = 3e-06
 Identities = 39/313 (12%), Positives = 82/313 (26%), Gaps = 23/313 (7%)

Query: 120 VSASGDRTIKVWN---TSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRYRDEF 174
           +++   + I VWN     +    + ++  G  + +     +  L V    +  +     +
Sbjct: 8   IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL---AY 64

Query: 175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENS 234
           +I       T      L  S T I                 ++  G   + R+       
Sbjct: 65  RIAPDDGALTFAAESALPGSLTHISTD-----HQGQFVFVGSYNAGNVSVTRLEDGLPVG 119

Query: 235 KGVYCLQYDD-HKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSD 293
                   D  H       + T+ V      +         G ++     E   + G+  
Sbjct: 120 VVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGP 179

Query: 294 STVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSI--AVWDMVSPNEITLRR 351
             +              ++    V  L+  +G +        +     D     +I +  
Sbjct: 180 RHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 239

Query: 352 VLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVV 411
                 A          + VS  G    K     +    R  N    G         L+ 
Sbjct: 240 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG-------KYLIA 292

Query: 412 SGSSDNTIRLWDI 424
           +G   + I +++I
Sbjct: 293 AGQKSHHISVYEI 305

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 9/75 (12%), Positives = 23/75 (30%), Gaps = 5/75 (6%)

Query: 371 VSASGDRTIKVWN---TSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 425
           +++   + I VWN     +    + ++  G  + +     +  L V    +  +  + I 
Sbjct: 8   IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67

Query: 426 CGACLRVLEGHEELV 440
                        L 
Sbjct: 68  PDDGALTFAAESALP 82

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (86), Expect = 0.002
 Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 5/111 (4%)

Query: 284 ERVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFS---NGMMVTCSKDRSIAV 338
           + V I+      + VW++N    +     +     V  +  S     + V    +  +  
Sbjct: 4   QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63

Query: 339 WDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEF 389
           + +   +             ++  +  D +      G       + +  E 
Sbjct: 64  YRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLED 114

>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All alpha proteins
fold: F-box domain
superfamily: F-box domain
family: F-box domain
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 91  QHGHINTYLKPMLQRDFISLLPN 113
           Q  H+   ++P  QRDFISLLP 
Sbjct: 2   QVKHMMQVIEPQFQRDFISLLPK 24

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} Length = 365

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

 Score = 39.4 bits (91), Expect = 8e-04
 Identities = 15/195 (7%), Positives = 52/195 (26%), Gaps = 9/195 (4%)

Query: 231 SENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISG 290
                 +Y      +K+ +  +  + +V    S+            V        +    
Sbjct: 153 DPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW-VAMHPTGNYLYALM 211

Query: 291 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLR 350
            + + +  + ++    +    HH   ++     +    T        V   ++ +   + 
Sbjct: 212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVC-ALTFSGKYMF 270

Query: 351 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDR-L 409
                ++  +        YI          +          T  GH   ++   + D  +
Sbjct: 271 ASSRANKFELQG------YIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324

Query: 410 VVSGSSDNTIRLWDI 424
            ++   +  + ++  
Sbjct: 325 AITDDQEGWLEIYRW 339

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	486
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.97
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.97
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.97
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.96
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.96
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.93
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.92
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.9
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.89
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.86
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.84
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.83
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.83
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.78
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.78
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.77
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.74
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.73
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.7
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.7
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.67
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.59
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.57
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.52
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.49
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.33
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.22
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.0
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.96
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.83
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.57
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.43
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.41
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.38
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.37
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.26
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.25
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.2
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.18
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.16
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.11
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.08
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.96
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.95
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.89
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	97.87
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.84
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.69
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.67
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.54
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.5
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.48
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	97.33
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.31
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.29
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	97.28
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.23
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.19
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.06
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	96.92
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	96.68
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	96.45
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.18
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	95.86
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	95.76
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	95.0
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	94.41
d1a12a_	401	Regulator of chromosome condensation RCC1 {Human (	93.93
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	93.49
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	93.33
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	93.06
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	90.99
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	89.17
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	89.13
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	89.01
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	88.14
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	85.26
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	81.8
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	81.16

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-39  Score=298.12  Aligned_cols=314  Identities=34%  Similarity=0.598  Sum_probs=269.0

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...|++ +++++|++||||+.||+|+|||+.++++++++.+|...|.+++|+++                 .|++++.
T Consensus        14 GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~-----------------~l~s~s~   75 (342)
T d2ovrb2          14 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN-----------------IIISGST   75 (342)
T ss_dssp             CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT-----------------EEEEEET
T ss_pred             CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC-----------------cccccee
Confidence            57777765 36778999999999999999999999999999999999999999643                 5777888


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      |+.+++|+........                               ........+......+..++.+..|+.+.+|+.
T Consensus        76 D~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~  124 (342)
T d2ovrb2          76 DRTLKVWNAETGECIH-------------------------------TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDI  124 (342)
T ss_dssp             TSCEEEEETTTTEEEE-------------------------------EECCCSSCEEEEEEETTEEEEEETTSEEEEEES
T ss_pred             ccccccccccccccee-------------------------------cccccceeEeeeecccccccccccceeEEEeec
Confidence            8889999974422111                               112334455566677888999999999999999


Q ss_pred             CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEEC
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDM  341 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~  341 (486)
                      .+++....+..+.............+++++.|+.|++||.+..+.+..+..|...+..+.+++..+++++.||.|++||+
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~  204 (342)
T d2ovrb2         125 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV  204 (342)
T ss_dssp             SSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEET
T ss_pred             ccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeec
Confidence            99998888877766666666688899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcC---CcccEEEEEeCCCEEEEEeCCCc
Q psy9182         342 VSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG---HKRGIACLQYRDRLVVSGSSDNT  418 (486)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~  418 (486)
                      +.++..   ....+|...+.++.++++++++++.|+.|++||....+....+..   |...+.++.++++++++|+.||.
T Consensus       205 ~~~~~~---~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~  281 (342)
T d2ovrb2         205 ETGNCI---HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGT  281 (342)
T ss_dssp             TTCCEE---EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSE
T ss_pred             ccceee---eEecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCE
Confidence            888654   566788999999999999999999999999999999888887764   56788999999999999999999


Q ss_pred             EEEEECCCCeeeEEec-----CcccCeEEEEe--cCCEEEEEeCCCc----EEEEeCCCC
Q psy9182         419 IRLWDIECGACLRVLE-----GHEELVRCIRF--DAKRIVSGAYDGK----IKVWNLVAA  467 (486)
Q Consensus       419 v~iwd~~~~~~~~~~~-----~h~~~v~~~~~--~~~~l~s~~~dg~----v~iwdl~~~  467 (486)
                      |++||++++++++.+.     +|...|++++|  ++.+|++|+.||+    |++||++..
T Consensus       282 i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~~  341 (342)
T d2ovrb2         282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  341 (342)
T ss_dssp             EEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCCC
Confidence            9999999999988773     57788999999  6678999999986    999999853

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.1e-38  Score=293.97  Aligned_cols=313  Identities=26%  Similarity=0.444  Sum_probs=244.2

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .|...++++ +++++++||||+.||+|+|||+.+++++.++.+|.++|.+++|+                ++..|++++.
T Consensus        10 GH~~~vitc-~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s----------------~~~~l~s~s~   72 (355)
T d1nexb2          10 GHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA----------------HGGILVSGST   72 (355)
T ss_dssp             CCSSSCEEE-EEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEE----------------TTTEEEEEET
T ss_pred             CcCCCcEEE-EEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEc----------------CCCEEEEEec
Confidence            466666432 35578999999999999999999999999999999999999996                3456899999


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                      |++|++|++...........                           .............+++..+++++.|+.|++||+
T Consensus        73 D~~i~iw~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~  125 (355)
T d1nexb2          73 DRTVRVWDIKKGCCTHVFEG---------------------------HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL  125 (355)
T ss_dssp             TCCEEEEETTTTEEEEEECC---------------------------CSSCEEEEEEEEETTEEEEEEEETTSEEEEEEC
T ss_pred             cccccccccccccccccccc---------------------------ccccccccccccccccceeeeecCCCcEEEEEc
Confidence            99999999855432211110                           001111222334557788999999999999998


Q ss_pred             CCceeeE-----------------------EEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEE
Q psy9182         262 VSLQCIK-----------------------VLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVL  318 (486)
Q Consensus       262 ~~~~~~~-----------------------~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~  318 (486)
                      .+.....                       ....|...+.+...+++.++++..|+.|++||+++++.+.....+...+.
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~  205 (355)
T d1nexb2         126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY  205 (355)
T ss_dssp             CC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred             cCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccccccc
Confidence            7754432                       22345556677777899999999999999999999999999988888999


Q ss_pred             EEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         319 HLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       319 ~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      ++.+++  ..+++++.|+.|++||++++...   ..+.+|...|.++.++++++++++.||.|++||++++......  |
T Consensus       206 ~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~---~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~  280 (355)
T d1nexb2         206 STIYDHERKRCISASMDTTIRIWDLENGELM---YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY--H  280 (355)
T ss_dssp             EEEEETTTTEEEEEETTSCEEEEETTTCCEE---EEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEE--E
T ss_pred             cccccccceeeecccccceEEeeeccccccc---cccccccccccccccccceeeeeecccccccccccccceeccc--c
Confidence            999875  48999999999999999988654   5567899999999999999999999999999999987654433  3


Q ss_pred             ccc---EEEEEeCCCEEEEEeCCCcEEEEECCCCeeeE-EecCcccCeEEEEecCCE-EEEEeCCCcEEEEeC
Q psy9182         397 KRG---IACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRFDAKR-IVSGAYDGKIKVWNL  464 (486)
Q Consensus       397 ~~~---v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~-l~s~~~dg~v~iwdl  464 (486)
                      ...   +.++..++.++++|+ ||.|++||+++++++. .+.+|.++|.+++|+++. +++++.||+++||.+
T Consensus       281 ~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         281 HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             CTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTEEEEEEESSSCEEEEEE
T ss_pred             cCCceEEEEEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCeEEEEEECCCcEEEEEE
Confidence            333   344555677776665 8999999999999885 567899999999996555 567789999776654

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.5e-38  Score=288.59  Aligned_cols=298  Identities=29%  Similarity=0.476  Sum_probs=249.4

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.+++++|++++||||+.||+|+|||+.+++++.++.+|...|.+++|+               +++..++++.
T Consensus        14 ~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~---------------~~~~~~~~~~   78 (317)
T d1vyhc1          14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD---------------HSGKLLASCS   78 (317)
T ss_dssp             ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEEC---------------TTSSEEEEEE
T ss_pred             cCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeee---------------cccccccccc
Confidence            4588899999999999999999999999999999999999999999999999997               5677788899


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .++.+..|+...........                             ..........+.+++..+++++.|+.+++||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  129 (317)
T d1vyhc1          79 ADMTIKLWDFQGFECIRTMH-----------------------------GHDHNVSSVSIMPNGDHIVSASRDKTIKMWE  129 (317)
T ss_dssp             TTSCCCEEETTSSCEEECCC-----------------------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             cccccccccccccccccccc-----------------------------cccccceeeeccCCCceEEeeccCcceeEee
Confidence            99999999864433221110                             1122334455677899999999999999999


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAV  338 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i  338 (486)
                      +.+++.+..+.+|...+.++++  +++++++++.||.|++|++.+++....+..+...+.++.+.++....         
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------  200 (317)
T d1vyhc1         130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYS---------  200 (317)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGG---------
T ss_pred             cccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccc---------
Confidence            9999999999999999999988  78999999999999999999999999999999999998887641000         


Q ss_pred             EECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEEEEEeCC
Q psy9182         339 WDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSD  416 (486)
Q Consensus       339 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d  416 (486)
                                  ................+.++++++.|+.|++||.++++++..+.+|...|.++.++  +++|++|+.|
T Consensus       201 ------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  268 (317)
T d1vyhc1         201 ------------SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD  268 (317)
T ss_dssp             ------------GGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETT
T ss_pred             ------------eeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECC
Confidence                        00000111111222267889999999999999999999999999999999999884  7899999999


Q ss_pred             CcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         417 NTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       417 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      |.|++||+++++++..+.+|...|++++|  ++++|++|+.||+|++||
T Consensus       269 g~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         269 KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             TEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            99999999999999999999999999999  788999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8e-37  Score=279.50  Aligned_cols=276  Identities=16%  Similarity=0.208  Sum_probs=235.2

Q ss_pred             cccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      +...+.....++++|+|+.|+.++ ++.|.+||+.+++....+.+|...|++++|+                        
T Consensus        13 p~~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~s------------------------   67 (311)
T d1nr0a1          13 PRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTS------------------------   67 (311)
T ss_dssp             CCCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEEC------------------------
T ss_pred             CCCCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEe------------------------
Confidence            334445667888999999999985 5679999999999999999999999999885                        


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEE
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVW  259 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~  259 (486)
                                                                                    |++++|++|+.||.|++|
T Consensus        68 --------------------------------------------------------------p~g~~latg~~dg~i~iw   85 (311)
T d1nr0a1          68 --------------------------------------------------------------PSGYYCASGDVHGNVRIW   85 (311)
T ss_dssp             --------------------------------------------------------------TTSSEEEEEETTSEEEEE
T ss_pred             --------------------------------------------------------------CCCCeEeccccCceEeee
Confidence                                                                          356677777788888888


Q ss_pred             ECCCceee--EEEcCCcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEE
Q psy9182         260 DRVSLQCI--KVLTGHTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTC  330 (486)
Q Consensus       260 d~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~  330 (486)
                      |+.+++..  ..+..|...|.+++|  +++++++++.  +..+++|++++++....+..|...|.+++|+++   .+++|
T Consensus        86 d~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sg  165 (311)
T d1nr0a1          86 DTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISG  165 (311)
T ss_dssp             ESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred             eeeccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccc
Confidence            87765533  457789999999999  6788888876  456999999999999999999999999999864   58889


Q ss_pred             eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc-------CCcccEE
Q psy9182         331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN-------GHKRGIA  401 (486)
Q Consensus       331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~  401 (486)
                      +.|+.|++||+++.+..   .....|...|.++.+  +++++++++.|+.|++||..+++.+..++       +|...|.
T Consensus       166 s~d~~i~i~d~~~~~~~---~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~  242 (311)
T d1nr0a1         166 SDDNTVAIFEGPPFKFK---STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF  242 (311)
T ss_dssp             ETTSCEEEEETTTBEEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred             ccccccccccccccccc---cccccccccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999876543   556688999999999  78999999999999999999988877764       5788999


Q ss_pred             EEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcc---cCeEEEEecCCEEEEEeCCCcEEEEeCC
Q psy9182         402 CLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHE---ELVRCIRFDAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       402 ~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~---~~v~~~~~~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +++|+  +++|++|+.||.|+|||+++++++..+..|.   ..+.++.|++++|++++.||.|++||.+
T Consensus       243 ~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         243 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             ccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence            99985  8999999999999999999999999987664   3567888899999999999999999974

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-36  Score=279.49  Aligned_cols=270  Identities=18%  Similarity=0.294  Sum_probs=227.3

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccce-----eeecCcccceeEEEeecceeEecCCCCceeccCccee
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFV-----RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI  176 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~-----~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l  176 (486)
                      .|...|.++.|+|+|++|++|+ ||.|+|||+.++...     ....+|.+.|.+++|+                     
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s---------------------  106 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL---------------------  106 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEEC---------------------
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEc---------------------
Confidence            4677899999999999999987 899999999765432     1234677777777664                     


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                                                                                       +++++|++|+.||.|
T Consensus       107 -----------------------------------------------------------------~dg~~l~s~~~dg~i  121 (337)
T d1gxra_         107 -----------------------------------------------------------------PDGCTLIVGGEASTL  121 (337)
T ss_dssp             -----------------------------------------------------------------TTSSEEEEEESSSEE
T ss_pred             -----------------------------------------------------------------CCCCEEEEeeccccc
Confidence                                                                             355667777777777


Q ss_pred             EEEECCC--ceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEE
Q psy9182         257 KVWDRVS--LQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTC  330 (486)
Q Consensus       257 ~i~d~~~--~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~  330 (486)
                      ++||+..  .+....+..|...+.++.+  ++.++++++.|+.|++||+.+++.......|...+.+++++++  .++++
T Consensus       122 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~  201 (337)
T d1gxra_         122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG  201 (337)
T ss_dssp             EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7777653  3455677788889988888  7789999999999999999999999999999999999999754  89999


Q ss_pred             eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--
Q psy9182         331 SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--  406 (486)
Q Consensus       331 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--  406 (486)
                      +.|+.+++||+++++.+..    ..+...|.++.+  +++++++++.|+.+++||+++++.. ....|...|.++.|+  
T Consensus       202 ~~d~~v~i~d~~~~~~~~~----~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~  276 (337)
T d1gxra_         202 GLDNTVRSWDLREGRQLQQ----HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYC  276 (337)
T ss_dssp             ETTSEEEEEETTTTEEEEE----EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTT
T ss_pred             cccccccccccccceeecc----cccccceEEEEEcccccccceeccccccccccccccccc-cccccccccceEEECCC
Confidence            9999999999998765432    247788999988  7889999999999999999988764 566799999999984  


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeC
Q psy9182         407 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       407 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl  464 (486)
                      +++|++|+.||.|++||+.+++.+..+. |...|.+++|  ++++|++|+.||+|+|||+
T Consensus       277 g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         277 GKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            7899999999999999999999988765 7789999999  7899999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.5e-36  Score=281.80  Aligned_cols=318  Identities=23%  Similarity=0.375  Sum_probs=243.3

Q ss_pred             EEEeecCceeeecccccccce----eeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccccc
Q psy9182         119 IVSASGDRTIKVWNTSSCEFV----RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       119 l~tg~~dg~v~iWd~~~~~~~----~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~  194 (486)
                      .+.+..++.+.+|+....+..    ....+|.+.|+|++|+               +|+.+|++|+ |++|++||+.++.
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs---------------~dg~~lasg~-d~~i~iW~~~~~~   94 (388)
T d1erja_          31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS---------------NDGEYLATGC-NKTTQVYRVSDGS   94 (388)
T ss_dssp             TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEEC---------------TTSSEEEEEC-BSCEEEEETTTCC
T ss_pred             ccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEEC---------------CCCCEEEEEe-CCeEEEEEecccc
Confidence            456778889999997654432    2233699999999998               6788899987 8999999997655


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccce--EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcC
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGV--YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTG  272 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  272 (486)
                      ..............             ...........+...+  +++++++++|++|+.||.|++||...++.+..+.+
T Consensus        95 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~  161 (388)
T d1erja_          95 LVARLSDDSAANKD-------------PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG  161 (388)
T ss_dssp             EEEEECC------------------------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             eEeeeccccccccc-------------ccccccccccCCCCCEEEEEECCCCCcceeccccccccccccccccccccccc
Confidence            43322211100000             0000001111233334  55667899999999999999999999999999999


Q ss_pred             CcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEEEEeCCCcEEEEECCCCCcee
Q psy9182         273 HTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMVTCSKDRSIAVWDMVSPNEIT  348 (486)
Q Consensus       273 ~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~  348 (486)
                      |...|.++.+  ++..+++++.+|.+++||.++.........+...+....+.  +.++++++.||.|++||..++....
T Consensus       162 h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~  241 (388)
T d1erja_         162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE  241 (388)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred             ccccccccccccccccccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccce
Confidence            9999999988  67899999999999999999988877776655544443333  3489999999999999999877543


Q ss_pred             eEE----eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce------------EEEEEcCCcccEEEEEeC--CC
Q psy9182         349 LRR----VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE------------FVRTLNGHKRGIACLQYR--DR  408 (486)
Q Consensus       349 ~~~----~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~------------~~~~~~~~~~~v~~~~~~--~~  408 (486)
                      ...    ...+|...|.++.+  ++++|++++.|+.|++||+.+++            .......|...|.++.++  ++
T Consensus       242 ~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  321 (388)
T d1erja_         242 RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE  321 (388)
T ss_dssp             EEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC
T ss_pred             eeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCC
Confidence            322    23467889999998  78899999999999999987643            334556788899999984  88


Q ss_pred             EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--------cCCEEEEEeCCCcEEEEeCC
Q psy9182         409 LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--------DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       409 ~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--------~~~~l~s~~~dg~v~iwdl~  465 (486)
                      +|++|+.||.|++||+++++++..+.+|.+.|+++++        ++++|++|+.||+|+|||++
T Consensus       322 ~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         322 YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            9999999999999999999999999999999999986        56789999999999999985

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=267.95  Aligned_cols=269  Identities=32%  Similarity=0.648  Sum_probs=223.0

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSH  181 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~  181 (486)
                      .+...|.|+.+  |+++||||+.||+|+|||+.++++++++.+|...|.+++|                           
T Consensus        13 ~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~---------------------------   63 (293)
T d1p22a2          13 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---------------------------   63 (293)
T ss_dssp             SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---------------------------
T ss_pred             CCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec---------------------------
Confidence            34566777654  7889999999999999999999999999988888877766                           


Q ss_pred             CCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEEC
Q psy9182         182 DDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDR  261 (486)
Q Consensus       182 dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~  261 (486)
                                                                                   ++++|++|+.||.|++|++
T Consensus        64 -------------------------------------------------------------~~~~l~s~s~D~~i~~~~~   82 (293)
T d1p22a2          64 -------------------------------------------------------------DERVIITGSSDSTVRVWDV   82 (293)
T ss_dssp             -------------------------------------------------------------CSSEEEEEETTSCEEEEES
T ss_pred             -------------------------------------------------------------ccceeeccccccccccccc
Confidence                                                                         3345666777777777777


Q ss_pred             CCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCc---EEEEecccCccEEEEEEcCCeEEEEeCCCcEEE
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGE---MVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAV  338 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i  338 (486)
                      ..+........+.....+.......++++..++.+.+||..+..   ....+..+...+..+.+.+..+++++.|+.|++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~  162 (293)
T d1p22a2          83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKV  162 (293)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEE
T ss_pred             ccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceee
Confidence            77766666665555555556677788888889999999987654   344556778888888888888999999999999


Q ss_pred             EECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCc
Q psy9182         339 WDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNT  418 (486)
Q Consensus       339 ~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  418 (486)
                      ||+++++..   ..+.++...+..+.+++.++++++.|+.|++||+++.+.+..+.+|...+.++..++.+|++|+.||.
T Consensus       163 ~d~~~~~~~---~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~  239 (293)
T d1p22a2         163 WNTSTCEFV---RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGK  239 (293)
T ss_dssp             EETTTCCEE---EEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSC
T ss_pred             ecCCCCcEE---EEEcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCE
Confidence            999887654   45567888888899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEECCC---------CeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEe
Q psy9182         419 IRLWDIEC---------GACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       419 v~iwd~~~---------~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwd  463 (486)
                      |++||+.+         ..++..+.+|.+.|++++|++++|+++|.||+|++||
T Consensus       240 i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         240 IKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             EEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred             EEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEecCCEEEEeC
Confidence            99999743         3567889999999999999999999999999999998

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.6e-35  Score=276.13  Aligned_cols=277  Identities=26%  Similarity=0.433  Sum_probs=224.3

Q ss_pred             cccccccccCCccCcceEEEeecCceeeecccccccceeeecC------------------cccceeEEEeecceeEecC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNG------------------HKRGIACLQYRDRLVVSGS  163 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~------------------h~~~V~~~~~~~~~~~~~~  163 (486)
                      .|...|.|+.|+|||++||+|+ |++|+|||+.+++.+..+..                  |...|.+++|+        
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s--------  130 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS--------  130 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC--------
T ss_pred             CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEEC--------
Confidence            4778999999999999999986 89999999999988777653                  55568888887        


Q ss_pred             CCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEE
Q psy9182         164 SDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQ  241 (486)
Q Consensus       164 ~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~  241 (486)
                             +++.+|++++.||.|++||........                            .   ...+...+.  ++.
T Consensus       131 -------~~~~~l~s~~~dg~v~i~~~~~~~~~~----------------------------~---~~~h~~~v~~~~~~  172 (388)
T d1erja_         131 -------PDGKFLATGAEDRLIRIWDIENRKIVM----------------------------I---LQGHEQDIYSLDYF  172 (388)
T ss_dssp             -------TTSSEEEEEETTSCEEEEETTTTEEEE----------------------------E---ECCCSSCEEEEEEC
T ss_pred             -------CCCCcceeccccccccccccccccccc----------------------------c---cccccccccccccc
Confidence                   578889999999999999975432211                            1   123344444  455


Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEe-------cc
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTL-------IH  312 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~-------~~  312 (486)
                      +++..+++++.++.+++||..+.........+...+....+  ++++|++|+.||.|++||.+++.....+       ..
T Consensus       173 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~  252 (388)
T d1erja_         173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG  252 (388)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CC
T ss_pred             cccccccccccceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccC
Confidence            67889999999999999999999888877766555444433  7889999999999999999998877665       34


Q ss_pred             cCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCce---------eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcE
Q psy9182         313 HCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEI---------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTI  379 (486)
Q Consensus       313 ~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~---------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i  379 (486)
                      |...|.++.|+++  .+++++.||.|++||+++....         ........|...|.++.+  ++++|++|+.||.|
T Consensus       253 h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i  332 (388)
T d1erja_         253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV  332 (388)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred             CCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEE
Confidence            6788999999864  8999999999999999765432         122345568889999998  78999999999999


Q ss_pred             EEEECCCceEEEEEcCCcccEEEEEe--------CCCEEEEEeCCCcEEEEECC
Q psy9182         380 KVWNTSSCEFVRTLNGHKRGIACLQY--------RDRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       380 ~iwd~~~~~~~~~~~~~~~~v~~~~~--------~~~~l~~~~~dg~v~iwd~~  425 (486)
                      ++||+++++++..+++|...|.++.+        ++.+|++|+.||+|+||+++
T Consensus       333 ~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         333 LFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             EEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            99999999999999999999999876        36799999999999999985

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.4e-34  Score=265.13  Aligned_cols=278  Identities=23%  Similarity=0.438  Sum_probs=231.1

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.+++|+|++++||||+.||+|+|||+.+++.+..+..|...|.+++|+               +++.++++++
T Consensus        52 ~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~---------------~~~~~l~~~~  116 (340)
T d1tbga_          52 RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA---------------PSGNYVACGG  116 (340)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEEC---------------TTSSEEEEEE
T ss_pred             CCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEee---------------ccceeeeeec
Confidence            3588899999999999999999999999999999999999999999999999986               3455555555


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .|+.+++|+.....                                                                  
T Consensus       117 ~d~~i~~~~~~~~~------------------------------------------------------------------  130 (340)
T d1tbga_         117 LDNICSIYNLKTRE------------------------------------------------------------------  130 (340)
T ss_dssp             TTCCEEEEESSSSC------------------------------------------------------------------
T ss_pred             ccceeecccccccc------------------------------------------------------------------
Confidence            56666555532110                                                                  


Q ss_pred             CCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--CeEEEEeCCCcEE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--GMMVTCSKDRSIA  337 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~~~~dg~i~  337 (486)
                       ........+.+|......... .+..+.....++....++............+...+....+.+  ..+++++.|+.|+
T Consensus       131 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~  209 (340)
T d1tbga_         131 -GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK  209 (340)
T ss_dssp             -SCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred             -cccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEE
Confidence             011223345566666555554 667888888999999999988888777777788888888764  4899999999999


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEc--CCcccEEEEEeC--CCEEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLN--GHKRGIACLQYR--DRLVV  411 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~--~~~l~  411 (486)
                      +||+++++..   ..+.+|...|.++++  ++++|++++.|+.|++||+...+.+..+.  .+...+.++.++  +++|+
T Consensus       210 i~d~~~~~~~---~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  286 (340)
T d1tbga_         210 LWDVREGMCR---QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL  286 (340)
T ss_dssp             EEETTTTEEE---EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEE
T ss_pred             EEECCCCcEE---EEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEE
Confidence            9999887644   556789999999998  78899999999999999999988877764  556778888884  78999


Q ss_pred             EEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         412 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       412 ~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      +|+.||.|++||+.+++++..+.+|.++|++++|  ++.+|++|+.||.|++||
T Consensus       287 ~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999999999999999999999999999999999  788999999999999997

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-34  Score=257.50  Aligned_cols=263  Identities=90%  Similarity=1.453  Sum_probs=241.2

Q ss_pred             eEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182         223 LLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       223 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~  302 (486)
                      .++++.++..+...|.|+++++++|++|+.||+|+|||+.+++++..+.+|.+.|.++++++++|++|+.||.|++|++.
T Consensus         4 ~~~~i~~~~~~~~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~   83 (293)
T d1p22a2           4 SLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVN   83 (293)
T ss_dssp             CCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESS
T ss_pred             eEEEEeccCCCCCCEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeecccceeecccccccccccccc
Confidence            45567778889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEE
Q psy9182         303 TGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW  382 (486)
Q Consensus       303 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iw  382 (486)
                      .+....................+.++++..++.+.+||...............|...+..+.+....+++++.|+.|++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~  163 (293)
T d1p22a2          84 TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW  163 (293)
T ss_dssp             SCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred             cccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccccCCCceeee
Confidence            99988888777777777777778999999999999999998877666677788999999999999999999999999999


Q ss_pred             ECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEE
Q psy9182         383 NTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVW  462 (486)
Q Consensus       383 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iw  462 (486)
                      |.++++.+..+.++...+..+.+++.++++++.||.|++||+++++.+..+.+|...+..+.+++.+|++++.||.|++|
T Consensus       164 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iw  243 (293)
T d1p22a2         164 NTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVW  243 (293)
T ss_dssp             ETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEE
T ss_pred             cCCCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999998899999999999999999


Q ss_pred             eCCCCCCCCCCccccceeeeeec
Q psy9182         463 NLVAALDPRAPTTTLCLRTLVVS  485 (486)
Q Consensus       463 dl~~~~~~~~~~~~~~~~~~~~~  485 (486)
                      |+.....+..+....+++++.+|
T Consensus       244 d~~~~~~~~~~~~~~~~~~~~~H  266 (293)
T d1p22a2         244 DLVAALDPRAPAGTLCLRTLVEH  266 (293)
T ss_dssp             EHHHHTSTTSCTTTTEEEEECCC
T ss_pred             ECCCCccccccCCceeeEEecCC
Confidence            99888777777777777776654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=260.27  Aligned_cols=287  Identities=33%  Similarity=0.672  Sum_probs=249.5

Q ss_pred             cccccccceeeecCccccee-EEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCC
Q psy9182         131 WNTSSCEFVRTLNGHKRGIA-CLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPS  209 (486)
Q Consensus       131 Wd~~~~~~~~~l~~h~~~V~-~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~  209 (486)
                      |+..+.+..+.|+||.+.|. |+++                 ++++|+||+.||+|++||+.+++..             
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s~~~~-----------------~g~~l~sgs~Dg~i~vWd~~~~~~~-------------   50 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVITCLQF-----------------CGNRIVSGSDDNTLKVWSAVTGKCL-------------   50 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEEEEEE-----------------ETTEEEEEETTSCEEEEETTTCCEE-------------
T ss_pred             CCCCCCCcCEEECCcCCceEEEEEE-----------------CCCEEEEEeCCCeEEEEECCCCCEE-------------
Confidence            77778888999999999885 4555                 4567888999999999998654321             


Q ss_pred             CcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEE
Q psy9182         210 GPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIIS  289 (486)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~  289 (486)
                                        .....|...+.++.+++.++++|+.|+.+++|+............+...+......+..+..
T Consensus        51 ------------------~~~~~h~~~V~~v~~~~~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (342)
T d2ovrb2          51 ------------------RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVS  112 (342)
T ss_dssp             ------------------EECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEE
T ss_pred             ------------------EEEeCCCCCEEEEEeCCCccccceecccccccccccccceecccccceeEeeeecccccccc
Confidence                              11235677888888888999999999999999999998888888888888888888889999


Q ss_pred             EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCE
Q psy9182         290 GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKY  369 (486)
Q Consensus       290 ~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  369 (486)
                      +..|+.+.+|+..+++....+................+++++.|+.|++||.......   ..+.+|...+..+.+++.+
T Consensus       113 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~  189 (342)
T d2ovrb2         113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL---HTLQGHTNRVYSLQFDGIH  189 (342)
T ss_dssp             EETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE---EEECCCSSCEEEEEECSSE
T ss_pred             cccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceee---EEEcCcccccccccCCCCE
Confidence            9999999999999999888887777777777777889999999999999999876543   5667888899999999999


Q ss_pred             EEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC---cccCeEEEEec
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG---HEELVRCIRFD  446 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~~~  446 (486)
                      +++++.||.|++||++.++.+..+.+|...+.++.+++++|++|+.||.|++||+...+....+..   |...+.++.++
T Consensus       190 l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (342)
T d2ovrb2         190 VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN  269 (342)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred             EEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccC
Confidence            999999999999999999999999999999999999999999999999999999999888887764   56788899999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCCC
Q psy9182         447 AKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       447 ~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ++++++|+.||+|++||++++.
T Consensus       270 ~~~~~s~s~Dg~i~iwd~~tg~  291 (342)
T d2ovrb2         270 KNFVITSSDDGTVKLWDLKTGE  291 (342)
T ss_dssp             SSEEEEEETTSEEEEEETTTCC
T ss_pred             CCeeEEEcCCCEEEEEECCCCC
Confidence            9999999999999999998764

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.2e-33  Score=262.42  Aligned_cols=275  Identities=16%  Similarity=0.191  Sum_probs=213.6

Q ss_pred             ccccccCCccCcceEEEeecCceeeeccccccc--ceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDRTIKVWNTSSCE--FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD  182 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~--~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d  182 (486)
                      ..|+|++|+|||++||+|+.||.|+|||..+++  .+..+++|.++|.+++|+                           
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fs---------------------------   60 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA---------------------------   60 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEE---------------------------
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEEC---------------------------
Confidence            468999999999999999999999999998775  577889999999999885                           


Q ss_pred             CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECC
Q psy9182         183 DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRV  262 (486)
Q Consensus       183 g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~  262 (486)
                                                                                 |++++|++|+.|+.|++||+.
T Consensus        61 -----------------------------------------------------------p~~~~l~s~s~D~~i~vWd~~   81 (371)
T d1k8kc_          61 -----------------------------------------------------------PDSNRIVTCGTDRNAYVWTLK   81 (371)
T ss_dssp             -----------------------------------------------------------TTTTEEEEEETTSCEEEEEEE
T ss_pred             -----------------------------------------------------------CCCCEEEEEECCCeEEEEeec
Confidence                                                                       344556666666666666655


Q ss_pred             Ccee--eEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE----EEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182         263 SLQC--IKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM----VNTLIHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       263 ~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                      ++..  ...+.+|...|.++.|  +++.+++++.|+.+++|++.....    ......|...|.+++|+|+  ++++|+.
T Consensus        82 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~  161 (371)
T d1k8kc_          82 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  161 (371)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             ccccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceecccc
Confidence            5443  3345678888999998  789999999999999999876543    2334567889999999864  8999999


Q ss_pred             CCcEEEEECCCCCce---------------eeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC
Q psy9182         333 DRSIAVWDMVSPNEI---------------TLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG  395 (486)
Q Consensus       333 dg~i~i~d~~~~~~~---------------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  395 (486)
                      |+.|++||+......               ........|...+.+++|  ++++|++++.|+.|++||+.+++.+..+..
T Consensus       162 D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~  241 (371)
T d1k8kc_         162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS  241 (371)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             CcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec
Confidence            999999998653211               123445678888999988  789999999999999999999999999999


Q ss_pred             CcccEEEEEeC--CCEEEEEeCCCcEEEEECCC--CeeeEE---------------------------------------
Q psy9182         396 HKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC--GACLRV---------------------------------------  432 (486)
Q Consensus       396 ~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~--~~~~~~---------------------------------------  432 (486)
                      |..+|.++.|.  +.+|+ ++.|+.+++|....  +.....                                       
T Consensus       242 ~~~~v~s~~fs~d~~~la-~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (371)
T d1k8kc_         242 ETLPLLAVTFITESSLVA-AGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL  320 (371)
T ss_dssp             SSCCEEEEEEEETTEEEE-EETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred             ccccceeeeecCCCCEEE-EEcCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEecccccccee
Confidence            99999999884  55555 55578777765432  221100                                       


Q ss_pred             ecCcccCeEEEEe--cC----CEEEEEeCCCcEEEEeCCC
Q psy9182         433 LEGHEELVRCIRF--DA----KRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       433 ~~~h~~~v~~~~~--~~----~~l~s~~~dg~v~iwdl~~  466 (486)
                      ...|.+.|+++++  .+    ..|+|+|.||.|++||+++
T Consensus       321 ~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             cccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence            0138889999998  11    3589999999999999864

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.2e-33  Score=251.89  Aligned_cols=279  Identities=18%  Similarity=0.283  Sum_probs=208.6

Q ss_pred             cccccccccccCCccCcceEEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         100 KPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       100 ~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ...|...|.+++++|++++|+||+.||+|++||+.+++.++.+. +|...|.+++|+               +++ .+++
T Consensus         8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~---------------~~g-~~~~   71 (299)
T d1nr0a2           8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT---------------SKG-DLFT   71 (299)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEEC---------------TTS-CEEE
T ss_pred             cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEee---------------ccc-eeec
Confidence            35688899999999999999999999999999999999988884 799999999996               344 3566


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                      ++.|+.+++|+...........                      ..   . ........+++++++..++++ .++.+.+
T Consensus        72 ~~~d~~v~~~~~~~~~~~~~~~----------------------~~---~-~~~~~~~~~~~s~~g~~~~~~-~~~~i~~  124 (299)
T d1nr0a2          72 VSWDDHLKVVPAGGSGVDSSKA----------------------VA---N-KLSSQPLGLAVSADGDIAVAA-CYKHIAI  124 (299)
T ss_dssp             EETTTEEEEECSSSSSSCTTSC----------------------CE---E-ECSSCEEEEEECTTSSCEEEE-ESSEEEE
T ss_pred             ccceeeEEEeccCCcccccccc----------------------cc---c-ccccccccccccccccccccc-ccccccc
Confidence            7779999999975432111100                      00   0 001222345566777766655 4678999


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEE-EecccCccEEEEEEcCC--eEEEEeCC
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVN-TLIHHCEAVLHLRFSNG--MMVTCSKD  333 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~i~~~~~~~~--~l~~~~~d  333 (486)
                      |+..  +.......+.  +.++++  +++++++|+.||.|++||+++++... ....|...|.+++|+++  .+++++.|
T Consensus       125 ~~~~--~~~~~~~~~~--~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  200 (299)
T d1nr0a2         125 YSHG--KLTEVPISYN--SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQS  200 (299)
T ss_dssp             EETT--EEEEEECSSC--EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccc--cccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9854  3333343443  455555  88999999999999999998877654 34567889999999864  89999999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEE--EEcCC-cccEEEEEe-CC
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVR--TLNGH-KRGIACLQY-RD  407 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~~~-~~~v~~~~~-~~  407 (486)
                      +.|++||+.++........+.+|...|.+++|  ++++|++|+.|+.|++||++++....  ....| ...+.++.+ ++
T Consensus       201 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~  280 (299)
T d1nr0a2         201 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE  280 (299)
T ss_dssp             SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET
T ss_pred             cccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCC
Confidence            99999999887766555666778899999988  78899999999999999988765332  22233 345666555 47


Q ss_pred             CEEEEEeCCCcEEEEECC
Q psy9182         408 RLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       408 ~~l~~~~~dg~v~iwd~~  425 (486)
                      ++|++|+.||.|++||+.
T Consensus       281 ~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         281 TTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             TEEEEEETTSCEEEEECC
T ss_pred             CEEEEEeCCCEEEEEecc
Confidence            788888888888888874

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-31  Score=245.80  Aligned_cols=284  Identities=14%  Similarity=0.267  Sum_probs=218.6

Q ss_pred             ccccccCCccCcceEEEeecCc-eeeecccccc--cceeeecCcc-cceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         105 RDFISLLPNFDEKYIVSASGDR-TIKVWNTSSC--EFVRTLNGHK-RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       105 ~~~~~~~~s~~~~~l~tg~~dg-~v~iWd~~~~--~~~~~l~~h~-~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ...+++.++|+++.|+.++.+. .|+.||....  ..+..+.+|. ..|++++|+|.             .++.+|++|+
T Consensus        18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~-------------~~g~~lasgs   84 (325)
T d1pgua1          18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI-------------KGSQYLCSGD   84 (325)
T ss_dssp             TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSS-------------TTCCEEEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeC-------------CCCCEEEEEe
Confidence            3567888999999999886554 4678886544  4567788874 67999999742             2445667777


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .||+|++||+.......                                                         .+    
T Consensus        85 ~Dg~i~iWd~~~~~~~~---------------------------------------------------------~~----  103 (325)
T d1pgua1          85 ESGKVIVWGWTFDKESN---------------------------------------------------------SV----  103 (325)
T ss_dssp             TTSEEEEEEEEEEGGGT---------------------------------------------------------EE----
T ss_pred             CCCCEEEeeecCCccee---------------------------------------------------------ee----
Confidence            77777777753321110                                                         00    


Q ss_pred             CCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC--CCcEEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCC
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS--DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKD  333 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~d  333 (486)
                        .......+..|.++|.+++|  +++++++++.  ++.+.+|+..+++.+..+..|...|.+++|+++   .+++++.|
T Consensus       104 --~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d  181 (325)
T d1pgua1         104 --EVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD  181 (325)
T ss_dssp             --EEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETT
T ss_pred             --ecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecc
Confidence              00111234567888999998  7788877654  678999999999999999999999999999864   57889999


Q ss_pred             CcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccE----EEEEe-
Q psy9182         334 RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGI----ACLQY-  405 (486)
Q Consensus       334 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v----~~~~~-  405 (486)
                      +.+++||+...+..........|...|.+++|   .+.++++++.|+.|++||+++++.+..+.+|...+    .++.+ 
T Consensus       182 ~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~  261 (325)
T d1pgua1         182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL  261 (325)
T ss_dssp             TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES
T ss_pred             cccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeecc
Confidence            99999999877655544555678888999998   36799999999999999999999999999887665    44554 


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccC--e--EEEEe-cCCEEEEEeCCCcEEEEeC
Q psy9182         406 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL--V--RCIRF-DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       406 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~--v--~~~~~-~~~~l~s~~~dg~v~iwdl  464 (486)
                      ++++|++++.|+.|+|||+++++++..+..|...  +  .++.+ .+.+|++++.||.|++|||
T Consensus       262 dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         262 DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            5889999999999999999999999988766543  3  34455 4568999999999999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.3e-32  Score=244.82  Aligned_cols=277  Identities=16%  Similarity=0.250  Sum_probs=207.7

Q ss_pred             ccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccc
Q psy9182         136 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIEN  215 (486)
Q Consensus       136 ~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (486)
                      |+..+.+.||..+|++++|+               +++.+|++|+.||+|++||+.++......                
T Consensus         2 g~~~~~~~GH~~~V~~l~~s---------------~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~----------------   50 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSS---------------ADGKTLFSADAEGHINSWDISTGISNRVF----------------   50 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEEC---------------TTSSEEEEEETTSCEEEEETTTCCEEECS----------------
T ss_pred             CccceEcCCCCCCcEEEEEC---------------CCCCEEEEEcCCCeEEEEECCCCcEEEEE----------------
Confidence            67788999999999999998               68889999999999999998664432211                


Q ss_pred             ccccCceeEEEEeccCCCccceEE--EEeCCCEEEEEecCCeEEEEECCCcee---eEEEcCCcccEEEEEe--cCCEEE
Q psy9182         216 NWRMGKFLLQRINCRSENSKGVYC--LQYDDHKIVSGLRDNTIKVWDRVSLQC---IKVLTGHTGSVLCLQY--DERVII  288 (486)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~--~~~~l~  288 (486)
                                    ...+...+.+  +++++. +++++.|+.+++|+......   ......+...+.++.+  ++..++
T Consensus        51 --------------~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~  115 (299)
T d1nr0a2          51 --------------PDVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV  115 (299)
T ss_dssp             --------------SCSCSSCEEEEEECTTSC-EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEE
T ss_pred             --------------cCCCCCcEEEEEeeccce-eecccceeeEEEeccCCcccccccccccccccccccccccccccccc
Confidence                          1123444444  455665 56677899999999765332   1222345667777777  666666


Q ss_pred             EEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe-
Q psy9182         289 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-  365 (486)
Q Consensus       289 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-  365 (486)
                      ++ .++.+.+|+..  +.....  ....+.+++++++  .+++|+.||.|++||+++++...  .....|...|.++.+ 
T Consensus       116 ~~-~~~~i~~~~~~--~~~~~~--~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~~  188 (299)
T d1nr0a2         116 AA-CYKHIAIYSHG--KLTEVP--ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE--VKTIVHPAEITSVAFS  188 (299)
T ss_dssp             EE-ESSEEEEEETT--EEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEE--EEEEECSSCEEEEEEC
T ss_pred             cc-ccccccccccc--cccccc--cccccccccccccccccccccccccccccccccccccc--cccccccccccccccc
Confidence            55 45689999954  333222  2345677888754  89999999999999998765432  234467889999998 


Q ss_pred             -CCCEEEEEeCCCcEEEEECCCceEE---EEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeee--EEecC-c
Q psy9182         366 -DEKYIVSASGDRTIKVWNTSSCEFV---RTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACL--RVLEG-H  436 (486)
Q Consensus       366 -~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~--~~~~~-h  436 (486)
                       +++++++++.|+.|++||+.++...   ..+.+|...|.+++++  +++|++|+.||.|++||++++...  ..... +
T Consensus       189 ~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~  268 (299)
T d1nr0a2         189 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA  268 (299)
T ss_dssp             TTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSST
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCC
Confidence             7889999999999999999876654   3456789999999884  789999999999999999876543  33333 4


Q ss_pred             ccCeEEEEe-cCCEEEEEeCCCcEEEEeCC
Q psy9182         437 EELVRCIRF-DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       437 ~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ...|.++.+ ++.+|++++.||+|++||+.
T Consensus       269 ~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         269 MSSVNSVIWLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             TSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred             CCcEEEEEECCCCEEEEEeCCCEEEEEecc
Confidence            457888887 88999999999999999984

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.7e-31  Score=245.64  Aligned_cols=278  Identities=28%  Similarity=0.512  Sum_probs=211.7

Q ss_pred             eeeecCcccce-eEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccc
Q psy9182         139 VRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNW  217 (486)
Q Consensus       139 ~~~l~~h~~~V-~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (486)
                      ..+|+||...| +|++|+                 +++|++|+.||+|++||+.+.+.                      
T Consensus         5 ~~tL~GH~~~vitc~~~~-----------------~~~l~tgs~Dg~i~vWd~~~~~~----------------------   45 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQFE-----------------DNYVITGADDKMIRVYDSINKKF----------------------   45 (355)
T ss_dssp             EEEEECCSSSCEEEEEEE-----------------TTEEEEEETTTEEEEEETTTTEE----------------------
T ss_pred             cEEECCcCCCcEEEEEEC-----------------CCEEEEEeCCCeEEEEECCCCcE----------------------
Confidence            56789998875 677774                 45688888899999999855322                      


Q ss_pred             ccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEE--EEe--cCCEEEEEeC
Q psy9182         218 RMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLC--LQY--DERVIISGSS  292 (486)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~~~--~~~~l~~~~~  292 (486)
                            +..+.   .|...|.++.+ ++.+|++|+.||.|++|+....+.......+.....+  ..+  ++..+++++.
T Consensus        46 ------~~~l~---~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (355)
T d1nexb2          46 ------LLQLS---GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR  116 (355)
T ss_dssp             ------EEEEE---CCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEET
T ss_pred             ------EEEEE---CCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccccccccccccccccccceeeeecC
Confidence                  22222   45555666554 4578999999999999999999888777655444332  333  6788999999


Q ss_pred             CCcEEEEECCCCcEEEE-----------------------ecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceee
Q psy9182         293 DSTVRVWDVNTGEMVNT-----------------------LIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITL  349 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~-----------------------~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~  349 (486)
                      |+.|++||+.+......                       ...+...+......++.++++..|+.|++||+.+++..  
T Consensus       117 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--  194 (355)
T d1nexb2         117 DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL--  194 (355)
T ss_dssp             TSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE--
T ss_pred             CCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeecccceeeeeecccccce--
Confidence            99999999987644322                       22344556667777889999999999999999887544  


Q ss_pred             EEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCC
Q psy9182         350 RRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       350 ~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                       ....++...+.++.+  ++.++++++.|+.|++||.+++..+..+.+|...|.++.+++++|++|+.||.|++||++++
T Consensus       195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~  273 (355)
T d1nexb2         195 -YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY  273 (355)
T ss_dssp             -EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTC
T ss_pred             -eeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccccceeeeeeccccccccccccc
Confidence             445566677777776  78999999999999999999999999999999999999999999999999999999999987


Q ss_pred             eeeEEecCcccCeEEEEe---cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         428 ACLRVLEGHEELVRCIRF---DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       428 ~~~~~~~~h~~~v~~~~~---~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      ...  +..|...+.++.+   ++.+|++| .||.|++||++++...
T Consensus       274 ~~~--~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~  316 (355)
T d1nexb2         274 SRK--FSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLV  316 (355)
T ss_dssp             CEE--EEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBC
T ss_pred             cee--cccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence            654  4445555555443   66666555 5999999999987644

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.3e-31  Score=239.24  Aligned_cols=229  Identities=23%  Similarity=0.300  Sum_probs=200.7

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcE--EEEe
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEM--VNTL  310 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~--~~~~  310 (486)
                      ..+++++|+++.|+.+. ++.|.+||+.+++....+.+|...|++++|  ++++|++|+.||.|++||+.+++.  ...+
T Consensus        20 ~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~   98 (311)
T d1nr0a1          20 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI   98 (311)
T ss_dssp             CCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE
T ss_pred             eEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccccc
Confidence            34567888999998875 667999999999999999999999999999  889999999999999999988764  3557


Q ss_pred             cccCccEEEEEEcCC--eEEEEeC--CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCC-EEEEEeCCCcEEEEE
Q psy9182         311 IHHCEAVLHLRFSNG--MMVTCSK--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEK-YIVSASGDRTIKVWN  383 (486)
Q Consensus       311 ~~~~~~i~~~~~~~~--~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~d~~i~iwd  383 (486)
                      ..|...|.+++|+++  .+++++.  +..+++|++.+++..   ..+.+|...|.++.|  +++ .+++|+.|+.|++||
T Consensus        99 ~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~---~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d  175 (311)
T d1nr0a1          99 PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN---GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFE  175 (311)
T ss_dssp             ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBC---BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEE
T ss_pred             ccccCcccccccccccccccccccccccccccccccccccc---ccccccccccccccccccceeeeccccccccccccc
Confidence            788999999999864  6777775  456999999887654   456788999999998  555 588899999999999


Q ss_pred             CCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEec-------CcccCeEEEEe--cCCEEEE
Q psy9182         384 TSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE-------GHEELVRCIRF--DAKRIVS  452 (486)
Q Consensus       384 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-------~h~~~v~~~~~--~~~~l~s  452 (486)
                      +++++....+..|...|.++.+  +++++++++.|+.|++||..+++.+..+.       +|...|++++|  ++++|++
T Consensus       176 ~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t  255 (311)
T d1nr0a1         176 GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS  255 (311)
T ss_dssp             TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE
T ss_pred             ccccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCCCCEEEE
Confidence            9999999999999999999999  48999999999999999999998887764       58889999999  7899999


Q ss_pred             EeCCCcEEEEeCCCC
Q psy9182         453 GAYDGKIKVWNLVAA  467 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~  467 (486)
                      |+.||.|+|||++++
T Consensus       256 gs~Dg~v~iwd~~t~  270 (311)
T d1nr0a1         256 ASADKTIKIWNVATL  270 (311)
T ss_dssp             EETTSEEEEEETTTT
T ss_pred             EeCCCeEEEEECCCC
Confidence            999999999999865

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.3e-30  Score=235.09  Aligned_cols=224  Identities=32%  Similarity=0.561  Sum_probs=203.8

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEE
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLH  319 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~  319 (486)
                      |++++|++|+.||+|+|||+.+++.+..+.+|...|.++.+  ++.+++++..++.+.+|+....+....+..+...+.+
T Consensus        27 p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (317)
T d1vyhc1          27 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSS  106 (317)
T ss_dssp             SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEE
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccccccccccccccccee
Confidence            46778999999999999999999999999999999999999  7889999999999999999999998888899999999


Q ss_pred             EEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC
Q psy9182         320 LRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG  395 (486)
Q Consensus       320 ~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  395 (486)
                      +.+.+  +.+++++.|+.+++||+++++..   ..+.+|...+.++.+  ++.++++++.|+.|++|+..+++....+..
T Consensus       107 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~  183 (317)
T d1vyhc1         107 VSIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE  183 (317)
T ss_dssp             EEECSSSSEEEEEETTSEEEEEETTTCCEE---EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred             eeccCCCceEEeeccCcceeEeecccceee---eEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEec
Confidence            99975  48999999999999999988654   556678889999988  789999999999999999999999999999


Q ss_pred             CcccEEEEEeC----------------------CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEE
Q psy9182         396 HKRGIACLQYR----------------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIV  451 (486)
Q Consensus       396 ~~~~v~~~~~~----------------------~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~  451 (486)
                      |...+.++.+.                      +.++++++.|+.|++||+++++++..+.+|...|.++++  ++++|+
T Consensus       184 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  263 (317)
T d1vyhc1         184 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL  263 (317)
T ss_dssp             CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred             CCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEE
Confidence            99988888763                      357999999999999999999999999999999999999  888999


Q ss_pred             EEeCCCcEEEEeCCCCC
Q psy9182         452 SGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       452 s~~~dg~v~iwdl~~~~  468 (486)
                      +|+.||.|++||+.++.
T Consensus       264 s~~~dg~i~iwd~~~~~  280 (317)
T d1vyhc1         264 SCADDKTLRVWDYKNKR  280 (317)
T ss_dssp             EEETTTEEEEECCTTSC
T ss_pred             EEECCCeEEEEECCCCc
Confidence            99999999999998654

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-30  Score=235.25  Aligned_cols=265  Identities=19%  Similarity=0.284  Sum_probs=208.8

Q ss_pred             cccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccc
Q psy9182         135 SCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIE  214 (486)
Q Consensus       135 ~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~  214 (486)
                      +.+++++|++|..+|++++|++                   |+||+.||+|++||+.+..                    
T Consensus         2 ~~~~i~~l~gH~~~I~~l~~s~-------------------l~sgs~Dg~v~~Wd~~~~~--------------------   42 (287)
T d1pgua2           2 HDEVLKTISGHNKGITALTVNP-------------------LISGSYDGRIMEWSSSSMH--------------------   42 (287)
T ss_dssp             EEEEEEEECCCSSCEEEEETTT-------------------TEEEETTSCEEETTTTEEE--------------------
T ss_pred             CcceeEEECCCCCceEEEEECc-------------------EEEEeCCCeEEEEECCCCC--------------------
Confidence            3578999999999999999963                   8899999999999975421                    


Q ss_pred             cccccCceeEEEEeccCCCccceEEEEe-CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeC
Q psy9182         215 NNWRMGKFLLQRINCRSENSKGVYCLQY-DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSS  292 (486)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~  292 (486)
                                      ..|...+.++.. ++..+++++.|+++++|+....+       ....+.++.+ .+..++..+.
T Consensus        43 ----------------~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~   99 (287)
T d1pgua2          43 ----------------QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE-------FGSQPKVASANNDGFTAVLTN   99 (287)
T ss_dssp             ----------------CCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE-------CSSCEEEEEECSSSEEEEEET
T ss_pred             ----------------CCCCCCEEEEEecCCCeEEEEeeccccccccccccc-------cccceeeeeeccCCceEEEee
Confidence                            134455666555 45678999999999999865432       2234555666 3445555566


Q ss_pred             CCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCC-cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCE
Q psy9182         293 DSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDR-SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKY  369 (486)
Q Consensus       293 dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~  369 (486)
                      ++.+.+|+..+++.+..+.. ...+.++...++.+++++.++ .+++|++...+..  ......+...+.+++|  ++.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~  176 (287)
T d1pgua2         100 DDDLLILQSFTGDIIKSVRL-NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVS--FDLKTPLRAKPSYISISPSETY  176 (287)
T ss_dssp             TSEEEEEETTTCCEEEEEEC-SSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEE--EECSSCCSSCEEEEEECTTSSE
T ss_pred             cccceeeeccceeeeeeccc-cceeeeeeccCcceeeeccccceeeeeecccccee--eeeeeccCCceeEEEeccCccc
Confidence            77899999999998888765 345677888888888888775 6999998654322  2333457778999988  7899


Q ss_pred             EEEEeCCCcEEEEECCCceEEE-EEcCCcccEEEEEeC------------CCEEEEEeCCCcEEEEECCC-CeeeEEecC
Q psy9182         370 IVSASGDRTIKVWNTSSCEFVR-TLNGHKRGIACLQYR------------DRLVVSGSSDNTIRLWDIEC-GACLRVLEG  435 (486)
Q Consensus       370 l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~------------~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~  435 (486)
                      |++|+.||.|++||+.+++... .+.+|...|.+++|+            +.++++|+.|+.|++||+++ ++.+..+.+
T Consensus       177 l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~  256 (287)
T d1pgua2         177 IAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA  256 (287)
T ss_dssp             EEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS
T ss_pred             cccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCC
Confidence            9999999999999999988655 467899999999873            46899999999999999976 567788889


Q ss_pred             cccCeEEEEe-cCCEEEEEeCCCcEEEEeC
Q psy9182         436 HEELVRCIRF-DAKRIVSGAYDGKIKVWNL  464 (486)
Q Consensus       436 h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl  464 (486)
                      |...|++++| ++..|++++.||.|++|++
T Consensus       257 h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         257 HKDGVNNLLWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             STTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             CCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence            9999999999 5668999999999999996

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-29  Score=230.80  Aligned_cols=232  Identities=19%  Similarity=0.324  Sum_probs=199.6

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccc--cceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSC--EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~--~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..|...|.+++++|++++|++|+.||.|++||+...  +....+.+|...|.+++|+                       
T Consensus        94 ~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~-----------------------  150 (337)
T d1gxra_          94 LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS-----------------------  150 (337)
T ss_dssp             SCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC-----------------------
T ss_pred             cCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccccccccc-----------------------
Confidence            345677899999999999999999999999998743  4455666676666655553                       


Q ss_pred             CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEE
Q psy9182         179 SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKV  258 (486)
Q Consensus       179 ~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i  258 (486)
                                                                                     +++.++++++.|+.|++
T Consensus       151 ---------------------------------------------------------------~~~~~l~s~~~d~~i~~  167 (337)
T d1gxra_         151 ---------------------------------------------------------------PDSKVCFSCCSDGNIAV  167 (337)
T ss_dssp             ---------------------------------------------------------------TTSSEEEEEETTSCEEE
T ss_pred             ---------------------------------------------------------------ccccccccccccccccc
Confidence                                                                           45677888999999999


Q ss_pred             EECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCC
Q psy9182         259 WDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDR  334 (486)
Q Consensus       259 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg  334 (486)
                      |++.+++......+|...|.++++  ++..+++++.||.+++||+++++.+..+. +...|.+++|+++  .+++++.|+
T Consensus       168 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~  246 (337)
T d1gxra_         168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESS  246 (337)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccceeecccc-cccceEEEEEcccccccceecccc
Confidence            999999999999999999999988  78899999999999999999999887764 5788999999754  899999999


Q ss_pred             cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE
Q psy9182         335 SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV  410 (486)
Q Consensus       335 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l  410 (486)
                      .+++||++.++..    ....|...|.++.|  ++++|++++.|+.|++||+.+++.+..+. |...|.+++++  +++|
T Consensus       247 ~i~i~d~~~~~~~----~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l  321 (337)
T d1gxra_         247 NVEVLHVNKPDKY----QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYI  321 (337)
T ss_dssp             CEEEEETTSSCEE----EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEE
T ss_pred             ccccccccccccc----cccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEE
Confidence            9999999887643    34578899999998  78899999999999999999999887765 77889998885  7899


Q ss_pred             EEEeCCCcEEEEEC
Q psy9182         411 VSGSSDNTIRLWDI  424 (486)
Q Consensus       411 ~~~~~dg~v~iwd~  424 (486)
                      ++|+.||+|+|||+
T Consensus       322 ~t~s~D~~I~vWdl  335 (337)
T d1gxra_         322 VTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEETTSCEEEEEE
T ss_pred             EEEeCCCeEEEEEE
Confidence            99999999999996

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=7.1e-29  Score=223.85  Aligned_cols=259  Identities=19%  Similarity=0.247  Sum_probs=206.1

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS  180 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s  180 (486)
                      ..|...|.++.++|    |+||+.||+|++||+.++.     .+|...|.++++.                ++..+++++
T Consensus        10 ~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~----------------~~~~~~s~s   64 (287)
T d1pgua2          10 SGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNS----------------KAQEYSSIS   64 (287)
T ss_dssp             CCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECC----------------STTCCEEEE
T ss_pred             CCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEec----------------CCCeEEEEe
Confidence            45788999999986    9999999999999998754     6899999999984                445688999


Q ss_pred             CCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEE
Q psy9182         181 HDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWD  260 (486)
Q Consensus       181 ~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d  260 (486)
                      .|+++++|++.....                                    .......++.+++..+ ..+.++.+.+|+
T Consensus        65 ~D~~v~~w~~~~~~~------------------------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  107 (287)
T d1pgua2          65 WDDTLKVNGITKHEF------------------------------------GSQPKVASANNDGFTA-VLTNDDDLLILQ  107 (287)
T ss_dssp             TTTEEEETTEEEEEC------------------------------------SSCEEEEEECSSSEEE-EEETTSEEEEEE
T ss_pred             ecccccccccccccc------------------------------------ccceeeeeeccCCceE-EEeecccceeee
Confidence            999999999754221                                    1112233444454444 455677899999


Q ss_pred             CCCceeeEEEcCCcccEEEEEecCCEEEEEeCCC-cEEEEECCCCcEEEEec-ccCccEEEEEEcCC--eEEEEeCCCcE
Q psy9182         261 RVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDS-TVRVWDVNTGEMVNTLI-HHCEAVLHLRFSNG--MMVTCSKDRSI  336 (486)
Q Consensus       261 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~dg~i  336 (486)
                      ..+++.+..+.. ...+.++.++++.+++++.++ .+++|++...+....+. .+...+.+++|+++  +|++|+.||.|
T Consensus       108 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i  186 (287)
T d1pgua2         108 SFTGDIIKSVRL-NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKI  186 (287)
T ss_dssp             TTTCCEEEEEEC-SSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccceeeeeeccc-cceeeeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccc
Confidence            999998888874 456778888888888888775 79999998776665554 46778999999865  89999999999


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEe------------CCCEEEEEeCCCcEEEEECCC-ceEEEEEcCCcccEEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDF------------DEKYIVSASGDRTIKVWNTSS-CEFVRTLNGHKRGIACL  403 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~------------~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~  403 (486)
                      ++||+.+++...  ....+|...|.+++|            ++.++++|+.|+.|++||+++ .+.+..+.+|...|+++
T Consensus       187 ~i~d~~~~~~~~--~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v  264 (287)
T d1pgua2         187 LLYDLQSREVKT--SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNL  264 (287)
T ss_dssp             EEEETTTTEEEE--CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEE
T ss_pred             cceeeccccccc--ccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEE
Confidence            999998775432  345678889999886            357899999999999999877 56677788999999999


Q ss_pred             EeC-CCEEEEEeCCCcEEEEEC
Q psy9182         404 QYR-DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       404 ~~~-~~~l~~~~~dg~v~iwd~  424 (486)
                      .|. +..|++++.||.|++|++
T Consensus       265 ~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         265 LWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEEETTEEEEEETTSCEEEEEE
T ss_pred             EECCCCEEEEEECCCeEEEEEE
Confidence            985 567999999999999996

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=2.4e-29  Score=231.75  Aligned_cols=284  Identities=12%  Similarity=0.129  Sum_probs=206.8

Q ss_pred             hcccccccccccCCccCcceEEEeecCceeeecccccccceee---ecCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182          99 LKPMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRT---LNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus        99 ~~~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~---l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      +...|+..|.++.|+|++++||+|+.||+|+|||+.++.....   ..+|..+|.+++|++.                  
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~------------------   67 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN------------------   67 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES------------------
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCC------------------
Confidence            3467788899999999999999999999999999987654333   3368889999988521                  


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCe
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNT  255 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~  255 (486)
                                                                                         ++.++++|+.||.
T Consensus        68 -------------------------------------------------------------------~~~~l~sg~~d~~   80 (342)
T d1yfqa_          68 -------------------------------------------------------------------TDLQIYVGTVQGE   80 (342)
T ss_dssp             -------------------------------------------------------------------SSEEEEEEETTSC
T ss_pred             -------------------------------------------------------------------CCCEEEEcccccc
Confidence                                                                               1234556666666


Q ss_pred             EEEEECCCceeeEEEcCCcccE---EEEEecCCEEEEEeCCCcEEEEECCCCcEE----EEeccc----CccEEEEEEcC
Q psy9182         256 IKVWDRVSLQCIKVLTGHTGSV---LCLQYDERVIISGSSDSTVRVWDVNTGEMV----NTLIHH----CEAVLHLRFSN  324 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~~~~v---~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~----~~~i~~~~~~~  324 (486)
                      |++|+............+....   .....++..+++++.++.+++||++++...    .....+    ......+...+
T Consensus        81 v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (342)
T d1yfqa_          81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS  160 (342)
T ss_dssp             EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred             eeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccC
Confidence            6666666555554444333332   222337789999999999999998654322    222221    22344555667


Q ss_pred             CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCceEE---------E-
Q psy9182         325 GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF---DEKYIVSASGDRTIKVWNTSSCEFV---------R-  391 (486)
Q Consensus       325 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~---------~-  391 (486)
                      +.+++++.|+.|++||+....................+...   ++..+++++.||.+.+|+.......         . 
T Consensus       161 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~  240 (342)
T d1yfqa_         161 SRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC  240 (342)
T ss_dssp             SEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEEC
T ss_pred             CceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeee
Confidence            89999999999999999887765444444455555555554   6789999999999999997643211         1 


Q ss_pred             -----EEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecC-cccCeEEEEecCCEEEEEeCCCcEEEEe
Q psy9182         392 -----TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRFDAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       392 -----~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~v~iwd  463 (486)
                           ....|...+.+++|+  +++|++|+.||.|++||+++++.+..+.. |...+.++++++++|++++.|+.+++|.
T Consensus       241 ~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHCS
T ss_pred             eeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEEcCCcEEEee
Confidence                 112466678888885  78999999999999999999999998854 5667888888999999999999999987


Q ss_pred             CCCC
Q psy9182         464 LVAA  467 (486)
Q Consensus       464 l~~~  467 (486)
                      ....
T Consensus       321 ~~~~  324 (342)
T d1yfqa_         321 AIDQ  324 (342)
T ss_dssp             SSCT
T ss_pred             eeCC
Confidence            6543

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=3.4e-28  Score=227.88  Aligned_cols=234  Identities=14%  Similarity=0.197  Sum_probs=196.7

Q ss_pred             CccceEEEEeCCCEEEEEecCCeEEEEECCCce--eeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE-
Q psy9182         233 NSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQ--CIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV-  307 (486)
Q Consensus       233 ~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~-  307 (486)
                      .+...+++++++++||+|+.||.|++||..+++  .+..+++|.++|.+++|  ++++|++|+.|+.|++||+.++... 
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~   87 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP   87 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccc
Confidence            345566778899999999999999999997765  56778999999999998  7899999999999999999877654 


Q ss_pred             -EEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCcee-eEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182         308 -NTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEIT-LRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV  381 (486)
Q Consensus       308 -~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i  381 (486)
                       ..+..|...|.++.|+|+  .+++++.|+.+++|++....... .......|...|.++.|  ++++|++|+.|+.|++
T Consensus        88 ~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v  167 (371)
T d1k8kc_          88 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI  167 (371)
T ss_dssp             EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             ccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEE
Confidence             345677889999999864  89999999999999988766543 23445678889999998  7889999999999999


Q ss_pred             EECCC------------------ceEEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         382 WNTSS------------------CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       382 wd~~~------------------~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      ||...                  ++.+.....|...+.+++|+  +++|++++.|+.|++||+.+++.+..+..|..+|.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~  247 (371)
T d1k8kc_         168 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL  247 (371)
T ss_dssp             EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred             EeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccce
Confidence            99754                  24566677889999998884  78999999999999999999999999999999999


Q ss_pred             EEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         442 CIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       442 ~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      +++|  ++.+|+ ++.|+.+++|..+..
T Consensus       248 s~~fs~d~~~la-~g~d~~~~~~~~~~~  274 (371)
T d1k8kc_         248 AVTFITESSLVA-AGHDCFPVLFTYDSA  274 (371)
T ss_dssp             EEEEEETTEEEE-EETTSSCEEEEEETT
T ss_pred             eeeecCCCCEEE-EEcCCceEEEEeeCC
Confidence            9999  665555 566888888776543

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=5.2e-27  Score=216.33  Aligned_cols=224  Identities=22%  Similarity=0.405  Sum_probs=189.3

Q ss_pred             eCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCC----cEEEEecccCc
Q psy9182         242 YDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTG----EMVNTLIHHCE  315 (486)
Q Consensus       242 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~  315 (486)
                      +++++|++|+.||.|+|||+.+++.+..+..|...|.+++|  +++++++|+.|+.+.+|+....    .....+..|..
T Consensus        65 ~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~  144 (340)
T d1tbga_          65 TDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG  144 (340)
T ss_dssp             TTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSS
T ss_pred             CCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccccccceecccccc
Confidence            36678999999999999999999999999999999999999  7899999999999999997654    34556677777


Q ss_pred             cEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         316 AVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       316 ~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                      ........ +..+.....+.....++.......   .....+...+....+  .+.++++++.|+.|++||+++++++..
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~  221 (340)
T d1tbga_         145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT---TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT  221 (340)
T ss_dssp             CEEEEEEEETTEEEEEETTTEEEEEETTTTEEE---EEEECCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccc---ccccccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEE
Confidence            66665554 457888889999999988765433   334455566666666  778999999999999999999999999


Q ss_pred             EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEe--cCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCC
Q psy9182         393 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       393 ~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      +.+|...|.+++++  +++|++|+.||.|++||++..+.+..+  ..|...|.+++|  ++++|++|+.||.|++||+.+
T Consensus       222 ~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~  301 (340)
T d1tbga_         222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK  301 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTT
T ss_pred             EeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCC
Confidence            99999999999985  789999999999999999998887766  456678999999  888999999999999999986


Q ss_pred             CC
Q psy9182         467 AL  468 (486)
Q Consensus       467 ~~  468 (486)
                      +.
T Consensus       302 ~~  303 (340)
T d1tbga_         302 AD  303 (340)
T ss_dssp             CC
T ss_pred             Cc
Confidence            53

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=5e-27  Score=221.63  Aligned_cols=263  Identities=13%  Similarity=0.192  Sum_probs=182.7

Q ss_pred             eeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCccccccccc
Q psy9182         140 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRM  219 (486)
Q Consensus       140 ~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (486)
                      ...++|...|.++++++                 ++++|++.|++|++||..+.......                    
T Consensus         8 ~~~~~H~~~I~~v~~~~-----------------~~l~S~S~D~~iriWd~~~~~~~~~~--------------------   50 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN-----------------SFTVSCSGDGYLKVWDNKLLDNENPK--------------------   50 (393)
T ss_dssp             EESSCSSSCEEEEEECS-----------------SEEEEEETTSEEEEEESBCCTTCCGG--------------------
T ss_pred             ecCCcccCccEEEEEeC-----------------CEEEEEECCCeEEEEECCCCCCCccc--------------------
Confidence            44579999999999854                 35778888889999996543211000                    


Q ss_pred             CceeEEEEeccCC---CccceEEEEe---CCCEEEEEecCCeEEEEECCCceeeE-----EE-----cCCcccEEEEEe-
Q psy9182         220 GKFLLQRINCRSE---NSKGVYCLQY---DDHKIVSGLRDNTIKVWDRVSLQCIK-----VL-----TGHTGSVLCLQY-  282 (486)
Q Consensus       220 ~~~~~~~~~~~~~---~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~-----~~~~~~v~~~~~-  282 (486)
                       ..... ......   +.....+...   +...+++++.||.|++|++.......     ..     ..+...+..+++ 
T Consensus        51 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (393)
T d1sq9a_          51 -DKSYS-HFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG  128 (393)
T ss_dssp             -GGEEE-EECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEE
T ss_pred             -ceeEe-eeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEe
Confidence             00000 000000   0011111121   23468899999999999865432211     11     123344555555 


Q ss_pred             ------cCCEEEEEeCCCcEEEEECCCCc---------------EEEE---ecccCccEEEEEEcCC-eEEEEeCCCcEE
Q psy9182         283 ------DERVIISGSSDSTVRVWDVNTGE---------------MVNT---LIHHCEAVLHLRFSNG-MMVTCSKDRSIA  337 (486)
Q Consensus       283 ------~~~~l~~~~~dg~i~vwd~~~~~---------------~~~~---~~~~~~~i~~~~~~~~-~l~~~~~dg~i~  337 (486)
                            .+.++++++.||.+++||+....               ....   ...+...+.+++|+++ ++++|+.||.|+
T Consensus       129 ~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~  208 (393)
T d1sq9a_         129 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQ  208 (393)
T ss_dssp             CCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEE
T ss_pred             cCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEE
Confidence                  24688999999999999974221               1111   1234456788999876 899999999999


Q ss_pred             EEECCCCCceeeE---EeeecCcccEEEEEe--CCCEEEEEeCCCc---EEEEECCCceEEEEEc-------------CC
Q psy9182         338 VWDMVSPNEITLR---RVLVGHRAAVNVVDF--DEKYIVSASGDRT---IKVWNTSSCEFVRTLN-------------GH  396 (486)
Q Consensus       338 i~d~~~~~~~~~~---~~~~~~~~~v~~~~~--~~~~l~~~~~d~~---i~iwd~~~~~~~~~~~-------------~~  396 (486)
                      +||+.+++.....   ..+.+|...|.+++|  ++++|++|+.|++   |++||+++++.+..+.             +|
T Consensus       209 iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH  288 (393)
T d1sq9a_         209 ISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH  288 (393)
T ss_dssp             EEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred             EEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecc
Confidence            9999987655332   235678999999998  8999999998874   9999999998888774             79


Q ss_pred             cccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeE
Q psy9182         397 KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR  441 (486)
Q Consensus       397 ~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  441 (486)
                      ...|++++|  ++++|++|+.|++|++||+++|+++.++++|.+.|.
T Consensus       289 ~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~  335 (393)
T d1sq9a_         289 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE  335 (393)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCS
T ss_pred             cCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCccc
Confidence            999999999  478999999999999999999999999999976553

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.3e-27  Score=217.92  Aligned_cols=232  Identities=15%  Similarity=0.212  Sum_probs=181.4

Q ss_pred             cccccccCCcc--CcceEEEeecCceeeecccccccceeeecC--------cccceeEEEeecceeEecCCCCceeccCc
Q psy9182         104 QRDFISLLPNF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG--------HKRGIACLQYRDRLVVSGSSDNTIRYRDE  173 (486)
Q Consensus       104 ~~~~~~~~~s~--~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~--------h~~~V~~~~~~~~~~~~~~~d~~i~~~~~  173 (486)
                      ...+.++.|+|  ++.+|++|+.||+|+|||+..++....+..        |.++|.++                     
T Consensus        63 ~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v---------------------  121 (325)
T d1pgua1          63 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI---------------------  121 (325)
T ss_dssp             TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEE---------------------
T ss_pred             CCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEE---------------------
Confidence            34688888887  678999999999999999987765544432        33333333                     


Q ss_pred             ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--
Q psy9182         174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL--  251 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--  251 (486)
                                                                                       +++++++++++++  
T Consensus       122 -----------------------------------------------------------------~~s~~~~~l~~~~~~  136 (325)
T d1pgua1         122 -----------------------------------------------------------------SWDFEGRRLCVVGEG  136 (325)
T ss_dssp             -----------------------------------------------------------------EECTTSSEEEEEECC
T ss_pred             -----------------------------------------------------------------EECCCCCccceeecc
Confidence                                                                             3345666666655  


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cC-CEEEEEeCCCcEEEEECCCCcEEEEec---ccCccEEEEEEcC-
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DE-RVIISGSSDSTVRVWDVNTGEMVNTLI---HHCEAVLHLRFSN-  324 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~i~~~~~~~-  324 (486)
                      .++.+.+|+..+++.+..+.+|...|.++.|  ++ ..+++++.||.+++||..+++....+.   .+...|.+++|+| 
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd  216 (325)
T d1pgua1         137 RDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD  216 (325)
T ss_dssp             SSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECST
T ss_pred             ccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccc
Confidence            4668999999999999999999999999999  33 467889999999999999887766653   4567799999986 


Q ss_pred             --CeEEEEeCCCcEEEEECCCCCceeeEEeeecCccc----EEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEEcCCc
Q psy9182         325 --GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAA----VNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK  397 (486)
Q Consensus       325 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  397 (486)
                        .++++++.|+.|++||+++++..   ..+.+|...    +.++.+ ++++|++++.|+.|++||+++++++..+..|.
T Consensus       217 ~~~~l~s~~~d~~i~iwd~~~~~~~---~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~  293 (325)
T d1pgua1         217 SGEFVITVGSDRKISCFDGKSGEFL---KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK  293 (325)
T ss_dssp             TCCEEEEEETTCCEEEEETTTCCEE---EECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred             cceeccccccccceeeeeecccccc---ccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecC
Confidence              37899999999999999988755   344455544    455555 78999999999999999999999999887665


Q ss_pred             cc----EEEEEeC-CCEEEEEeCCCcEEEEEC
Q psy9182         398 RG----IACLQYR-DRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       398 ~~----v~~~~~~-~~~l~~~~~dg~v~iwd~  424 (486)
                      ..    ..++.+. +.+|++++.||.|++||+
T Consensus       294 ~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         294 QQLGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             TCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             CcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence            43    2344554 568999999999999996

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.5e-26  Score=218.31  Aligned_cols=253  Identities=15%  Similarity=0.276  Sum_probs=186.2

Q ss_pred             EEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCcee------eEEEcCCcccEEEEE------e---cCCEEE
Q psy9182         224 LQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC------IKVLTGHTGSVLCLQ------Y---DERVII  288 (486)
Q Consensus       224 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~v~~~~------~---~~~~l~  288 (486)
                      +......+.|...|.+++..++++++++.|++|++||..+.+.      ......|...+..+.      .   +..+++
T Consensus         4 ~~~~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (393)
T d1sq9a_           4 IATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   83 (393)
T ss_dssp             EEEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             EeeeecCCcccCccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEE
Confidence            3455667789999999999999999999999999999765431      222333444432222      2   235788


Q ss_pred             EEeCCCcEEEEECCCCcE----E-EEe-----cccCccEEEEEEcC-------CeEEEEeCCCcEEEEECCCCCc-----
Q psy9182         289 SGSSDSTVRVWDVNTGEM----V-NTL-----IHHCEAVLHLRFSN-------GMMVTCSKDRSIAVWDMVSPNE-----  346 (486)
Q Consensus       289 ~~~~dg~i~vwd~~~~~~----~-~~~-----~~~~~~i~~~~~~~-------~~l~~~~~dg~i~i~d~~~~~~-----  346 (486)
                      +++.||.|++|++.....    . ...     ..+...+..+++..       ..+++++.||.+++||+.....     
T Consensus        84 s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~  163 (393)
T d1sq9a_          84 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  163 (393)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccccee
Confidence            999999999999754321    1 111     12334566666642       3788999999999999853211     


Q ss_pred             -------e---eeEEeeecCcccEEEEEe-CCCEEEEEeCCCcEEEEECCCceEEEEE------cCCcccEEEEEe--CC
Q psy9182         347 -------I---TLRRVLVGHRAAVNVVDF-DEKYIVSASGDRTIKVWNTSSCEFVRTL------NGHKRGIACLQY--RD  407 (486)
Q Consensus       347 -------~---~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~v~~~~~--~~  407 (486)
                             .   ........+...+.++++ ...+|++|+.|++|++||+.+++++..+      .+|...|.+++|  ++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg  243 (393)
T d1sq9a_         164 TLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG  243 (393)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred             eeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccc
Confidence                   0   011112234455778888 3449999999999999999999887655      468899999998  58


Q ss_pred             CEEEEEeCCCc---EEEEECCCCeeeEEec-------------CcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         408 RLVVSGSSDNT---IRLWDIECGACLRVLE-------------GHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       408 ~~l~~~~~dg~---v~iwd~~~~~~~~~~~-------------~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ++|++|+.|++   |++||+++++++..+.             +|...|++++|  |+++|+++|.||+|++||+++   
T Consensus       244 ~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~---  320 (393)
T d1sq9a_         244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT---  320 (393)
T ss_dssp             TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT---
T ss_pred             ceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCC---
Confidence            99999999874   9999999999888774             79999999999  889999999999999999984   


Q ss_pred             CCCCccccceeeeeec
Q psy9182         470 PRAPTTTLCLRTLVVS  485 (486)
Q Consensus       470 ~~~~~~~~~~~~~~~~  485 (486)
                            +.|++++.+|
T Consensus       321 ------g~~~~~l~gH  330 (393)
T d1sq9a_         321 ------KERITTLNMH  330 (393)
T ss_dssp             ------TEEEEEEECC
T ss_pred             ------CCEEEEECCc
Confidence                  4566666554

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.93  E-value=1.1e-25  Score=209.35  Aligned_cols=307  Identities=12%  Similarity=0.040  Sum_probs=215.6

Q ss_pred             cCCcc-CcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCC--Ccce
Q psy9182         110 LLPNF-DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHD--DTIL  186 (486)
Q Consensus       110 ~~~s~-~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~d--g~i~  186 (486)
                      -.||| ||+++|+++ +|.|++||+.++..++.  +|...|.+++|+               +|++.|++++.+  ..|+
T Consensus         8 ~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~--~~~~~v~~~~~s---------------pDg~~l~~~~~~~g~~v~   69 (360)
T d1k32a3           8 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--PEPLRIRYVRRG---------------GDTKVAFIHGTREGDFLG   69 (360)
T ss_dssp             EEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC--SCCSCEEEEEEC---------------SSSEEEEEEEETTEEEEE
T ss_pred             ccccCCCCCEEEEEE-CCeEEEEECCCCcEEEc--cCCCCEEEEEEC---------------CCCCEEEEEEcCCCCEEE
Confidence            35799 999999986 57999999998876654  689999999998               678778766654  3789


Q ss_pred             eeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeEEEEECCCcee
Q psy9182         187 IWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTIKVWDRVSLQC  266 (486)
Q Consensus       187 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  266 (486)
                      +||+.++......                              ........++++|++++|++++.++.+++|+..+++.
T Consensus        70 v~d~~~~~~~~~~------------------------------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~  119 (360)
T d1k32a3          70 IYDYRTGKAEKFE------------------------------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP  119 (360)
T ss_dssp             EEETTTCCEEECC------------------------------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             EEECCCCcEEEee------------------------------CCCceEEeeeecccccccceeccccccccccccccce
Confidence            9998654322211                              1123334567788999999999999999999999999


Q ss_pred             eEEEcCCcccEEEEEe--cCCEEEEEe----------CCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC
Q psy9182         267 IKVLTGHTGSVLCLQY--DERVIISGS----------SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK  332 (486)
Q Consensus       267 ~~~~~~~~~~v~~~~~--~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~  332 (486)
                      ...+..|...+.+++|  ++++|+.+.          .++.+++||+.+++... +..+...+..+.|+++  .|++++.
T Consensus       120 ~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~~~~~~~spdg~~l~~~s~  198 (360)
T d1k32a3         120 TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-ATTENSHDYAPAFDADSKNLYYLSY  198 (360)
T ss_dssp             EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE-CSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             eeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceee-ecccccccccccccCCCCEEEEEeC
Confidence            9999989888888887  788888643          34569999999876654 4455677788888865  8999999


Q ss_pred             CCcEEEEECCCCCcee----eEEeeecCcccEEEEEe--CCCEEEEEeCC-----CcEEEEECCCceEEEEEcCCcccEE
Q psy9182         333 DRSIAVWDMVSPNEIT----LRRVLVGHRAAVNVVDF--DEKYIVSASGD-----RTIKVWNTSSCEFVRTLNGHKRGIA  401 (486)
Q Consensus       333 dg~i~i~d~~~~~~~~----~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~  401 (486)
                      ++.+.+||........    .......+...+..+.+  ++..++++..+     ..+..++...++. ..+..+...+.
T Consensus       199 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  277 (360)
T d1k32a3         199 RSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSIL  277 (360)
T ss_dssp             CCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEE
T ss_pred             CCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCce-eEeeecCCCce
Confidence            9999999976543211    00111122222222222  33344333322     1244444444442 33444555555


Q ss_pred             EEEeC-----CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCCCCC
Q psy9182         402 CLQYR-----DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       402 ~~~~~-----~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~~~  470 (486)
                      .+.+.     ..++++++.++.|++||+.+++..    .|.+.|.+++|  ||++|++++.||.|++||++.+...
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~  349 (360)
T d1k32a3         278 IYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE  349 (360)
T ss_dssp             EEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSC
T ss_pred             EEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcc
Confidence            55442     246788889999999999987643    34456899999  9999999999999999999877553

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=9.9e-24  Score=193.67  Aligned_cols=229  Identities=14%  Similarity=0.139  Sum_probs=160.6

Q ss_pred             EeCCCEEEEEecCCeEEEEECCCcee---eEEEcCCcccEEEEEe---cCCEEEEEeCCCcEEEEECCCCcEEEEecccC
Q psy9182         241 QYDDHKIVSGLRDNTIKVWDRVSLQC---IKVLTGHTGSVLCLQY---DERVIISGSSDSTVRVWDVNTGEMVNTLIHHC  314 (486)
Q Consensus       241 ~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  314 (486)
                      +|++++|++|+.||+|+|||+.++..   +....+|..+|.+++|   ++.+|++|+.||.|++|++..+........+.
T Consensus        20 sp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~   99 (342)
T d1yfqa_          20 IPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNE   99 (342)
T ss_dssp             EGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCC
T ss_pred             eCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccc
Confidence            34566677777777777777654322   2223358999999998   34589999999999999999887776665444


Q ss_pred             ccE---EEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEE-eeec----CcccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         315 EAV---LHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR-VLVG----HRAAVNVVDFDEKYIVSASGDRTIKVWNTSS  386 (486)
Q Consensus       315 ~~i---~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~----~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~  386 (486)
                      ...   .........+++++.++.+++||++......... ....    .......+..++..+++++.|+.|++||+..
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~  179 (342)
T d1yfqa_         100 ANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL  179 (342)
T ss_dssp             CCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSC
T ss_pred             cccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCCCcEEEEeccc
Confidence            332   2222345699999999999999987654332211 1111    2233445566889999999999999999987


Q ss_pred             ceEEE---EEcCCcccEEEEEe---CCCEEEEEeCCCcEEEEECCCCeee---------E------EecCcccCeEEEEe
Q psy9182         387 CEFVR---TLNGHKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGACL---------R------VLEGHEELVRCIRF  445 (486)
Q Consensus       387 ~~~~~---~~~~~~~~v~~~~~---~~~~l~~~~~dg~v~iwd~~~~~~~---------~------~~~~h~~~v~~~~~  445 (486)
                      .+...   ....+.....+...   ++..+++++.||.+.+|+.......         .      ...+|...|++++|
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~  259 (342)
T d1yfqa_         180 CEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF  259 (342)
T ss_dssp             CTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE
T ss_pred             CcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEe
Confidence            65432   23344444555444   4789999999999999998643211         1      11356678999999


Q ss_pred             --cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         446 --DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       446 --~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                        ++++|++|+.||.|++||++++..
T Consensus       260 sp~~~~lasg~~Dg~v~vWD~~~~~~  285 (342)
T d1yfqa_         260 SPRHKFLYTAGSDGIISCWNLQTRKK  285 (342)
T ss_dssp             CTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred             cCCccEEEEECCCCEEEEEECCCCcE
Confidence              788999999999999999997643

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=4.7e-22  Score=189.20  Aligned_cols=314  Identities=13%  Similarity=0.107  Sum_probs=206.5

Q ss_pred             ccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcceeeeccc
Q psy9182         113 NFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTILIWDFLN  192 (486)
Q Consensus       113 s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i~vWd~~~  192 (486)
                      .+.+.++++++.||.|+|||+.+++.+.++..|. .+..++|+               +|++++++++.|+++++||+.+
T Consensus        29 d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafS---------------PDGk~l~~~~~d~~v~vwd~~t   92 (426)
T d1hzua2          29 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMS---------------ASGRYLLVIGRDARIDMIDLWA   92 (426)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEEC---------------TTSCEEEEEETTSEEEEEETTS
T ss_pred             CCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEEC---------------CCCCEEEEEeCCCCEEEEEccC
Confidence            3444567889999999999999999999999885 58999998               7999999999999999999866


Q ss_pred             ccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeCCCEEEE-EecCCeEEEEECCCceeeEE
Q psy9182         193 YSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYDDHKIVS-GLRDNTIKVWDRVSLQCIKV  269 (486)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~  269 (486)
                      .....                          ...+.....+...+.  +++|||+++++ +..++.+.+||..++++...
T Consensus        93 ~~~~~--------------------------~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~  146 (426)
T d1hzua2          93 KEPTK--------------------------VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI  146 (426)
T ss_dssp             SSCEE--------------------------EEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred             CceeE--------------------------EEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEE
Confidence            44211                          111111112222222  23568998654 45889999999999999888


Q ss_pred             EcCCcccEEEEEe--cCC-EEEEEeCCCc-----------EEEEECCCCcE-EEEecccCccEEEEEEcCC--eEE-EEe
Q psy9182         270 LTGHTGSVLCLQY--DER-VIISGSSDST-----------VRVWDVNTGEM-VNTLIHHCEAVLHLRFSNG--MMV-TCS  331 (486)
Q Consensus       270 ~~~~~~~v~~~~~--~~~-~l~~~~~dg~-----------i~vwd~~~~~~-~~~~~~~~~~i~~~~~~~~--~l~-~~~  331 (486)
                      +..|...+....+  ++. ..++++.|+.           +.+++...... ......+...+..+.++++  +++ +..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~  226 (426)
T d1hzua2         147 VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAAN  226 (426)
T ss_dssp             EECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEET
T ss_pred             eeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeee
Confidence            8776654432222  222 2233333443           44444333321 1222345666788888764  444 445


Q ss_pred             CCCcEEEEECCCCCceeeEEeee-cCcccEEEEEeCCC-EE--EEEeCCCcEEEEECCC-------ceEEEEEcCCcccE
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLV-GHRAAVNVVDFDEK-YI--VSASGDRTIKVWNTSS-------CEFVRTLNGHKRGI  400 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~l--~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v  400 (486)
                      .+..+.+++..+++......... .+..........+. .+  +..+.|+.+.+|+...       ++....+.+|...+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v  306 (426)
T d1hzua2         227 NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS  306 (426)
T ss_dssp             TCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCC
T ss_pred             cccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCce
Confidence            67779999998876553322211 11122222222222 22  2334577888887654       47788999999888


Q ss_pred             EEEEe--CCCEEEE-------EeCCCcEEEEECCCCeeeEEec---------CcccCeEEEEe--cCCEEEEE-----eC
Q psy9182         401 ACLQY--RDRLVVS-------GSSDNTIRLWDIECGACLRVLE---------GHEELVRCIRF--DAKRIVSG-----AY  455 (486)
Q Consensus       401 ~~~~~--~~~~l~~-------~~~dg~v~iwd~~~~~~~~~~~---------~h~~~v~~~~~--~~~~l~s~-----~~  455 (486)
                      ..+++  ++++|++       ++.|++|+|||+++++...++.         .|...|.+++|  ||++++.+     +.
T Consensus       307 ~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~  386 (426)
T d1hzua2         307 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKND  386 (426)
T ss_dssp             CCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTS
T ss_pred             eEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCC
Confidence            77777  5888884       4568899999999988765542         45567999999  89877433     35


Q ss_pred             CCcEEEEeCCCCC
Q psy9182         456 DGKIKVWNLVAAL  468 (486)
Q Consensus       456 dg~v~iwdl~~~~  468 (486)
                      ||.|+|||..+.+
T Consensus       387 ~~~i~v~D~~T~k  399 (426)
T d1hzua2         387 SSALVVVDDKTLK  399 (426)
T ss_dssp             CCEEEEEETTTTE
T ss_pred             CCeEEEEECCCCe
Confidence            8889999998764

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.89  E-value=3.6e-22  Score=189.69  Aligned_cols=317  Identities=11%  Similarity=0.058  Sum_probs=205.3

Q ss_pred             cccccCCccCcceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCcc
Q psy9182         106 DFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDTI  185 (486)
Q Consensus       106 ~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~i  185 (486)
                      .......++++-++++.+.||+|.|||..+++.+..+..|. .+..++|+               +|++++++++.|+.+
T Consensus        22 ~~~~~~~~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fS---------------pDG~~l~~~s~dg~v   85 (432)
T d1qksa2          22 TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLS---------------ASGRYLFVIGRDGKV   85 (432)
T ss_dssp             SSCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEEC---------------TTSCEEEEEETTSEE
T ss_pred             CceeecCCCCcEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEEC---------------CCCCEEEEEcCCCCE
Confidence            34444555566667999999999999999999999998875 68999998               799999999999999


Q ss_pred             eeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceE--EEEeCCCEE-EEEecCCeEEEEECC
Q psy9182         186 LIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVY--CLQYDDHKI-VSGLRDNTIKVWDRV  262 (486)
Q Consensus       186 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l-~~~~~dg~i~i~d~~  262 (486)
                      ++||+.+.....                          ...+.....+...+.  .+++||++| +++..++.|++||..
T Consensus        86 ~~~d~~t~~~~~--------------------------~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~  139 (432)
T d1qksa2          86 NMIDLWMKEPTT--------------------------VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE  139 (432)
T ss_dssp             EEEETTSSSCCE--------------------------EEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred             EEEEeeCCCceE--------------------------EEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCc
Confidence            999986543211                          111111111222222  245689976 678889999999999


Q ss_pred             CceeeEEEcCCc-----------ccEEEEEe--cCCE-EEEEeCCCcEEEEECCCCcEEEEec-ccCccEEEEEEcCC--
Q psy9182         263 SLQCIKVLTGHT-----------GSVLCLQY--DERV-IISGSSDSTVRVWDVNTGEMVNTLI-HHCEAVLHLRFSNG--  325 (486)
Q Consensus       263 ~~~~~~~~~~~~-----------~~v~~~~~--~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~i~~~~~~~~--  325 (486)
                      +++.+..+..|.           ....++.+  ++.. +++...++.|.+||..+++...... .+......+.++++  
T Consensus       140 t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~  219 (432)
T d1qksa2         140 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHR  219 (432)
T ss_dssp             TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSC
T ss_pred             cccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCC
Confidence            999988876543           22344544  5655 4566678999999998877554332 33456788899875  


Q ss_pred             eEEEEe-CCCcEEEEECCCCCceeeEEeee--cCcccEEEEEe-CC-CEEEEEe-CCCcEEEEECCCc-------eEEEE
Q psy9182         326 MMVTCS-KDRSIAVWDMVSPNEITLRRVLV--GHRAAVNVVDF-DE-KYIVSAS-GDRTIKVWNTSSC-------EFVRT  392 (486)
Q Consensus       326 ~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~~~~-~~-~~l~~~~-~d~~i~iwd~~~~-------~~~~~  392 (486)
                      ++++++ .++.+.++|..+.+.........  .+......... .. ...++.. .++.+.+|+....       +....
T Consensus       220 ~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~  299 (432)
T d1qksa2         220 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDS  299 (432)
T ss_dssp             EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred             EEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEE
Confidence            555554 56688889987765443222111  12222222222 22 2222222 2556666664332       22222


Q ss_pred             EcCCcc---------------------------cEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         393 LNGHKR---------------------------GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       393 ~~~~~~---------------------------~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      +..+.+                           ...++ ++++.+++++.|+.+++|++.++..+   ..|...|.+++|
T Consensus       300 ~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l---~~~~~~v~~~~f  375 (432)
T d1qksa2         300 FPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGI---TEGQPRVVQGEF  375 (432)
T ss_dssp             EECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTC---CSSCCEEEEEEE
T ss_pred             EEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE-EechhhcccccCCceEeccccccccc---CCCCCcEEEeEE
Confidence            221110                           01112 67788888999999999988655333   356678899999


Q ss_pred             --cCCEEEEEe-----CCCcEEEEeCCCCC
Q psy9182         446 --DAKRIVSGA-----YDGKIKVWNLVAAL  468 (486)
Q Consensus       446 --~~~~l~s~~-----~dg~v~iwdl~~~~  468 (486)
                        ||++++.+.     .+|.|.|||..+..
T Consensus       376 S~DG~~v~~S~~~~~~~~g~i~i~D~~T~k  405 (432)
T d1qksa2         376 NKDGTEVWFSVWNGKDQESALVVVDDKTLE  405 (432)
T ss_dssp             CTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             CCCCCEEEEEEecCCCCCCcEEEEECCCce
Confidence              998876553     46889999988764

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.86  E-value=5.9e-22  Score=183.75  Aligned_cols=285  Identities=11%  Similarity=0.053  Sum_probs=193.0

Q ss_pred             cccccccccCCccCcceEEEeecC--ceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecC
Q psy9182         102 MLQRDFISLLPNFDEKYIVSASGD--RTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSS  179 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg~~d--g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~  179 (486)
                      .|...+.++.|+|||++|++++.+  ..|++||..+++ +..+..|...|.+++|+               +|+.+|+++
T Consensus        40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~-~~~~~~~~~~v~~~~~s---------------pdg~~l~~~  103 (360)
T d1k32a3          40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-AEKFEENLGNVFAMGVD---------------RNGKFAVVA  103 (360)
T ss_dssp             SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-EEECCCCCCSEEEEEEC---------------TTSSEEEEE
T ss_pred             cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc-EEEeeCCCceEEeeeec---------------cccccccee
Confidence            466778999999999999887655  379999998876 45677899999999998               688999999


Q ss_pred             CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--------
Q psy9182         180 SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL--------  251 (486)
Q Consensus       180 s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--------  251 (486)
                      +.++.+++|++.+.....                             ............++++++++|+.+.        
T Consensus       104 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~  154 (360)
T d1k32a3         104 NDRFEIMTVDLETGKPTV-----------------------------IERSREAMITDFTISDNSRFIAYGFPLKHGETD  154 (360)
T ss_dssp             ETTSEEEEEETTTCCEEE-----------------------------EEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred             ccccccccccccccceee-----------------------------eeecccccccchhhccceeeeeeecccccccee
Confidence            999999999985533211                             1112223444577888999988654        


Q ss_pred             --cCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEE-------EEecccCccEEEE
Q psy9182         252 --RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMV-------NTLIHHCEAVLHL  320 (486)
Q Consensus       252 --~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~-------~~~~~~~~~i~~~  320 (486)
                        .++.+++||..+++...... +...+.++.+  +++.|++++.++.+.+||.......       ..+..+......+
T Consensus       155 ~~~~~~~~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (360)
T d1k32a3         155 GYVMQAIHVYDMEGRKIFAATT-ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPT  233 (360)
T ss_dssp             SCCEEEEEEEETTTTEEEECSC-SSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGG
T ss_pred             eccccceeeeccccCceeeecc-cccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccc
Confidence              34569999999887655443 5566666666  8999999999999999998665432       1222222222222


Q ss_pred             EEcCC--eEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEe-----CCCEEEEEeCCCcEEEEECCCce
Q psy9182         321 RFSNG--MMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       321 ~~~~~--~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .++++  .++.+..+     ..+..++...+..    ..+..+...+..+.+     ...++++++.++.|++||+.+++
T Consensus       234 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  309 (360)
T d1k32a3         234 KLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY----RMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK  309 (360)
T ss_dssp             GCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE----EEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC
T ss_pred             eECCCcCcccccceeecccccceeecccCcCce----eEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe
Confidence            22221  22222221     1233333333222    222233444444444     22367788889999999999876


Q ss_pred             EEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe
Q psy9182         389 FVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV  440 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v  440 (486)
                      .. .   |...+..++|  +|++|++++.||.|++||+++++....+..+..++
T Consensus       310 ~~-~---~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~  359 (360)
T d1k32a3         310 VT-E---VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL  359 (360)
T ss_dssp             EE-E---EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCE
T ss_pred             EE-E---ecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEeccccc
Confidence            43 2   3345767666  68999999999999999999998888877666554

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.84  E-value=7.1e-18  Score=151.70  Aligned_cols=223  Identities=16%  Similarity=0.179  Sum_probs=162.1

Q ss_pred             EEEEeCCCEE-EEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCE-EEEEeCCCcEEEEECCCCcEEEEeccc
Q psy9182         238 YCLQYDDHKI-VSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERV-IISGSSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       238 ~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      ++++++|+++ ++++.++.|++||+.+++.+..+..+.. +..+.+  ++.. ++++..++.+.+|+..+++....+..+
T Consensus        37 va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (301)
T d1l0qa2          37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG  115 (301)
T ss_dssp             EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred             EEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-ccccccccccccccccccccceeeecccccceeeeecccc
Confidence            3456788876 4566789999999999999999887654 466666  5654 455667789999999999888887654


Q ss_pred             CccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCC-CcEEEEECCCc
Q psy9182         314 CEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGD-RTIKVWNTSSC  387 (486)
Q Consensus       314 ~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-~~i~iwd~~~~  387 (486)
                       ....++.++++   .++++..++.+.+|+..+......   .. +...+..+.+  ++..+++++.+ +.+.+|+....
T Consensus       116 -~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (301)
T d1l0qa2         116 -KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT---VS-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN  190 (301)
T ss_dssp             -SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE---EE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             -ccceEEEeecCCCeeeeeeccccceeeeeccccceeee---cc-cCCCceEEEeeccccceeeecccccccccccccce
Confidence             45667778754   445666788899999988765432   22 2233455555  67777776654 67778888887


Q ss_pred             eEEEEEcCCcccEEEEEe--CCCEEEEEe---CCCcEEEEECCCCeeeEEecCcccCeEEEEe--cCCEE-EEEeCCCcE
Q psy9182         388 EFVRTLNGHKRGIACLQY--RDRLVVSGS---SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DAKRI-VSGAYDGKI  459 (486)
Q Consensus       388 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l-~s~~~dg~v  459 (486)
                      +....+..+.. ...+.+  ++..++.++   .++.|++||+.+++.+..+..+ ..+.+++|  ||++| ++++.|+.|
T Consensus       191 ~~~~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i  268 (301)
T d1l0qa2         191 SVIDTVKVEAA-PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTV  268 (301)
T ss_dssp             EEEEEEECSSE-EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred             eeeecccccCC-cceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeE
Confidence            77777665543 344444  577666554   3468999999999999888754 45789999  88886 577789999


Q ss_pred             EEEeCCCCC
Q psy9182         460 KVWNLVAAL  468 (486)
Q Consensus       460 ~iwdl~~~~  468 (486)
                      ++||+.+++
T Consensus       269 ~v~D~~t~~  277 (301)
T d1l0qa2         269 SVIDTATNT  277 (301)
T ss_dssp             EEEETTTTE
T ss_pred             EEEECCCCe
Confidence            999998764

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.83  E-value=4.6e-19  Score=162.26  Aligned_cols=273  Identities=9%  Similarity=0.014  Sum_probs=189.3

Q ss_pred             ceEEEeecCceeeecccccccceeeecCc--ccceeEEEeecceeEecCCCCceeccCccee-ecCCCCCcceeeecccc
Q psy9182         117 KYIVSASGDRTIKVWNTSSCEFVRTLNGH--KRGIACLQYRDRLVVSGSSDNTIRYRDEFQI-VSSSHDDTILIWDFLNY  193 (486)
Q Consensus       117 ~~l~tg~~dg~v~iWd~~~~~~~~~l~~h--~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l-~s~s~dg~i~vWd~~~~  193 (486)
                      +|+++++.|+.|+|||+.+++.+.++..+  ...+..++|+               +|++++ ++++.++.|.+||+.++
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~s---------------pDg~~l~v~~~~~~~v~v~D~~t~   66 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVA---------------PGGRIAYATVNKSESLVKIDLVTG   66 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEEC---------------TTSSEEEEEETTTTEEEEEETTTC
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEEC---------------CCCCEEEEEECCCCeEEEEECCCC
Confidence            58999999999999999999999988653  4557788887               577765 57788999999998765


Q ss_pred             cccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------------cCCeEEEEEC
Q psy9182         194 SETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------------RDNTIKVWDR  261 (486)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------------~dg~i~i~d~  261 (486)
                      +.........                  .      ........-+++++++++++++.            .++.+.+||.
T Consensus        67 ~~~~~~~~~~------------------~------~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~  122 (337)
T d1pbyb_          67 ETLGRIDLST------------------P------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA  122 (337)
T ss_dssp             CEEEEEECCB------------------T------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEET
T ss_pred             cEEEEEecCC------------------C------cccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccc
Confidence            4332111100                  0      00011122456788888887775            4678999999


Q ss_pred             CCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccE------EEEEE-----------
Q psy9182         262 VSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAV------LHLRF-----------  322 (486)
Q Consensus       262 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i------~~~~~-----------  322 (486)
                      .+++....+..+ ..+.++.+  +++++++++.  .+.+||..+++....+..+....      ....+           
T Consensus       123 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (337)
T d1pbyb_         123 ETLSRRKAFEAP-RQITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMA  199 (337)
T ss_dssp             TTTEEEEEEECC-SSCCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEE
T ss_pred             cCCeEEEecccc-CCceEEEEcCCCCEEEEEcC--CcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceee
Confidence            999998888754 34555555  8888888864  47889999998887764422110      00000           


Q ss_pred             --------cCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEE
Q psy9182         323 --------SNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRT  392 (486)
Q Consensus       323 --------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~  392 (486)
                              .......+..++.+.+||..++....  .....+...+..+.+  ++.+++.+  ++.|++||+.+++.+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~  275 (337)
T d1pbyb_         200 TPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM--REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKR  275 (337)
T ss_dssp             EEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE--EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEE
T ss_pred             eeeeeeeeccceeeecccCccEEEEEcCCCcEEE--EEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEE
Confidence                    01111122334568899988876443  233345555555555  66676655  57899999999999988


Q ss_pred             EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCc
Q psy9182         393 LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGH  436 (486)
Q Consensus       393 ~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h  436 (486)
                      +. +...+.++.+  +|++|++++.|+.|+|||.++++.+..++..
T Consensus       276 ~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~  320 (337)
T d1pbyb_         276 VP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             EE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             Ec-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence            86 3455666776  5899999999999999999999999888643

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.83  E-value=3.7e-19  Score=163.50  Aligned_cols=284  Identities=11%  Similarity=0.062  Sum_probs=188.7

Q ss_pred             cCCccCcceEEEeecCceeeecccccccceeeec-CcccceeEEEeecceeEecCCCCceeccCccee-ecCCCCCccee
Q psy9182         110 LLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLN-GHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI-VSSSHDDTILI  187 (486)
Q Consensus       110 ~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~-~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l-~s~s~dg~i~v  187 (486)
                      .+++++++||++++.|++|.+||+.+++++.++. .|...+.+++|+               +|++++ ++++.++.|.+
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~s---------------pDG~~l~v~~~~~~~v~~   66 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMA---------------PDNRTAYVLNNHYGDIYG   66 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEEC---------------TTSSEEEEEETTTTEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEEC---------------CCCCEEEEEECCCCcEEE
Confidence            4678999999999999999999999999999987 456677889997               566665 67778999999


Q ss_pred             eecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe------------cCCe
Q psy9182         188 WDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL------------RDNT  255 (486)
Q Consensus       188 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------------~dg~  255 (486)
                      ||+.+.............               ..        ......-..+++||++++++.            .++.
T Consensus        67 ~d~~t~~~~~~~~~~~~~---------------~~--------~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~  123 (346)
T d1jmxb_          67 IDLDTCKNTFHANLSSVP---------------GE--------VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR  123 (346)
T ss_dssp             EETTTTEEEEEEESCCST---------------TE--------EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred             EeCccCeeeeeecccccc---------------cc--------cCCceEEEEEecCCCEEEEEecCCcceeeeeccCcce
Confidence            998765443211111000               00        001122356788888887765            4678


Q ss_pred             EEEEECCCceeeEEEcCC--cccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc---------------
Q psy9182         256 IKVWDRVSLQCIKVLTGH--TGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA---------------  316 (486)
Q Consensus       256 i~i~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------  316 (486)
                      +.+|+..+++....+..+  ...+..+..  ++..++ .+  +.+.+||+.+++.+..+..+...               
T Consensus       124 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (346)
T d1jmxb_         124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH  200 (346)
T ss_dssp             EEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred             EEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE-eC--CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEE
Confidence            899998877654433221  122333333  444444 33  56899999999888877543210               


Q ss_pred             ------EEEE--E--Ec--CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEE
Q psy9182         317 ------VLHL--R--FS--NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       317 ------i~~~--~--~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iw  382 (486)
                            +...  .  +.  ...+.++..++.+.+||+.++....  .....+...+..+.+  ++.+++.... +.|.+|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~  277 (346)
T d1jmxb_         201 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT--QEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKY  277 (346)
T ss_dssp             CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE--EEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEE
T ss_pred             ecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEE--EEeecccceeEEEEEeCCCCEEEEecC-CeEEEE
Confidence                  0000  0  00  1133344556678889988876543  334455666666665  5566665544 579999


Q ss_pred             ECCCceEEEEEcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCccc
Q psy9182         383 NTSSCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE  438 (486)
Q Consensus       383 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~  438 (486)
                      |..+++.+..+.. ...+.++++  +|++|++++.|+.|++||+++++.+..++.+.+
T Consensus       278 d~~~~~~~~~~~~-~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g  334 (346)
T d1jmxb_         278 DLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG  334 (346)
T ss_dssp             ETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSS
T ss_pred             ECCCCcEEEEEcC-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCC
Confidence            9999999888763 334556666  689999999999999999999999999875543

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.78  E-value=2.6e-17  Score=150.39  Aligned_cols=262  Identities=10%  Similarity=0.050  Sum_probs=178.4

Q ss_pred             ceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEecc-CCCccceEEEEeCCCEE-EEEe
Q psy9182         174 FQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCR-SENSKGVYCLQYDDHKI-VSGL  251 (486)
Q Consensus       174 ~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l-~~~~  251 (486)
                      +++++++.|++|.+||+.+.+..                            ..+... .......++++|||+++ ++++
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~----------------------------~~i~~~~~~~~~~~i~~spDg~~l~v~~~   53 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVD----------------------------KVITIADAGPTPMVPMVAPGGRIAYATVN   53 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEE----------------------------EEEECTTCTTCCCCEEECTTSSEEEEEET
T ss_pred             eEEEEEcCCCEEEEEECCCCeEE----------------------------EEEECCCCCCCccEEEECCCCCEEEEEEC
Confidence            46889999999999998664322                            222221 12334457889999987 4667


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccE-----EEEEe--cCCEEEEEe------------CCCcEEEEECCCCcEEEEecc
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSV-----LCLQY--DERVIISGS------------SDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v-----~~~~~--~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      .++.|.+||+.+++.+..+..+....     ..+++  ++++++++.            .++.+.+||..+++....+..
T Consensus        54 ~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  133 (337)
T d1pbyb_          54 KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA  133 (337)
T ss_dssp             TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred             CCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc
Confidence            89999999999999998887654332     23444  788887765            457899999999998888765


Q ss_pred             cCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEeeecCc------------------ccEEEE--E--eCCC
Q psy9182         313 HCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR------------------AAVNVV--D--FDEK  368 (486)
Q Consensus       313 ~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------------------~~v~~~--~--~~~~  368 (486)
                      + ..+..+.++++  .+++++  +.+.+||..+++............                  ......  .  ++..
T Consensus       134 ~-~~~~~~~~s~dg~~l~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (337)
T d1pbyb_         134 P-RQITMLAWARDGSKLYGLG--RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDID  210 (337)
T ss_dssp             C-SSCCCEEECTTSSCEEEES--SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSC
T ss_pred             c-CCceEEEEcCCCCEEEEEc--CCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccc
Confidence            4 45667788754  676665  457889988765432211100000                  000000  0  0111


Q ss_pred             EEEEEeCCCcEEEEECCCceEEEE-EcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         369 YIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      ....+..++.+.+||..+++.... +..+...+..+.++  +.+++.+  ++.|++||+++++.+..+. +...+.+++|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~  287 (337)
T d1pbyb_         211 PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNV  287 (337)
T ss_dssp             TTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEE
T ss_pred             eeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEE
Confidence            122223345689999998876543 44566666666664  5565544  6899999999999998886 5567889999


Q ss_pred             --cCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         446 --DAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       446 --~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                        ||++|++++.||.|++||+.+.+.
T Consensus       288 s~dG~~l~v~~~~~~i~v~D~~t~~~  313 (337)
T d1pbyb_         288 STDGSTVWLGGALGDLAAYDAETLEK  313 (337)
T ss_dssp             CTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred             CCCCCEEEEEeCCCcEEEEECCCCcE
Confidence              899999999999999999987653

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=1.2e-17  Score=158.35  Aligned_cols=264  Identities=13%  Similarity=0.067  Sum_probs=175.9

Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      .+++.+.||+|++||+.+++.                            +..+...  .....++++|||+++++++.||
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~----------------------------~~~l~~g--~~~~~vafSPDGk~l~~~~~d~   83 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKI----------------------------VKVIDTG--YAVHISRMSASGRYLLVIGRDA   83 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSE----------------------------EEEEECC--SSEEEEEECTTSCEEEEEETTS
T ss_pred             EEEEEcCCCEEEEEECCCCcE----------------------------EEEEeCC--CCeeEEEECCCCCEEEEEeCCC
Confidence            468888999999999866443                            2233322  2344578999999999999999


Q ss_pred             eEEEEECCCceeeEE--Ec---CCcccEEEEEe--cCCEEEE-EeCCCcEEEEECCCCcEEEEecccCccEEEEEEcC--
Q psy9182         255 TIKVWDRVSLQCIKV--LT---GHTGSVLCLQY--DERVIIS-GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSN--  324 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~--~~---~~~~~v~~~~~--~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--  324 (486)
                      .|++||+.+++....  +.   +|.+.+.++.|  ||+++++ +..++.+.+||..++++...+..+...+....+.+  
T Consensus        84 ~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (426)
T d1hzua2          84 RIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP  163 (426)
T ss_dssp             EEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCC
T ss_pred             CEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCC
Confidence            999999998875433  32   34444555555  7887655 45789999999999998887766544333222221  


Q ss_pred             C-eEEEEeC-----------CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCceE
Q psy9182         325 G-MMVTCSK-----------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSCEF  389 (486)
Q Consensus       325 ~-~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~~  389 (486)
                      . ..++.+.           .+.+.+++........  ....++...+..+.+  ++++++++. .+..+.+++..+++.
T Consensus       164 ~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~  241 (426)
T d1hzua2         164 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT--VTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL  241 (426)
T ss_dssp             CEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCE--EEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEE
T ss_pred             ceeEEEECCCCCEEEEecCCCCeEEEEEecccccee--eEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccE
Confidence            1 2223333           3444455544443322  122345566667777  777777665 566799999999998


Q ss_pred             EEEEcCCc----ccEEEEEeCCC-E--EEEEeCCCcEEEEECCC-------CeeeEEecCcccCeEEEEe--cCCEEEE-
Q psy9182         390 VRTLNGHK----RGIACLQYRDR-L--VVSGSSDNTIRLWDIEC-------GACLRVLEGHEELVRCIRF--DAKRIVS-  452 (486)
Q Consensus       390 ~~~~~~~~----~~v~~~~~~~~-~--l~~~~~dg~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~--~~~~l~s-  452 (486)
                      +.......    .....+...+. .  .++.+.|+.+.+|+...       ++....+.+|...+.+++|  |+++|++ 
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~  321 (426)
T d1hzua2         242 SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD  321 (426)
T ss_dssp             EEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEEC
T ss_pred             EEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEe
Confidence            88776332    22222333322 2  23344678888888654       4788899999999999999  8899984 


Q ss_pred             ------EeCCCcEEEEeCCCCCCC
Q psy9182         453 ------GAYDGKIKVWNLVAALDP  470 (486)
Q Consensus       453 ------~~~dg~v~iwdl~~~~~~  470 (486)
                            ++.|++|++||+.+....
T Consensus       322 ~~~~~s~~~~~tv~vwd~~t~~~~  345 (426)
T d1hzua2         322 TTFNPDARISQSVAVFDLKNLDAK  345 (426)
T ss_dssp             CTTCSSHHHHTCEEEEETTCTTSC
T ss_pred             ecCCCCcccCCEEEEEECCCCCcC
Confidence                  556899999999876543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.77  E-value=1.7e-15  Score=140.62  Aligned_cols=309  Identities=7%  Similarity=-0.053  Sum_probs=198.2

Q ss_pred             cccccccccCCccCcceEEEe-----ecCceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccCcc
Q psy9182         102 MLQRDFISLLPNFDEKYIVSA-----SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       102 ~~~~~~~~~~~s~~~~~l~tg-----~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~~~  174 (486)
                      .+...+...+++|||++++..     +.++.|.+||..+++.+.++..+...  .++|+  ++.++.++.+       ..
T Consensus        18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~-------~~   88 (373)
T d2madh_          18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTS-------FS   88 (373)
T ss_pred             cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeec-------CC
Confidence            455667888999999998764     34568999999999999999877654  56675  3333333221       22


Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--c
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL--R  252 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~  252 (486)
                      ....++.++.|.+||..+.+............                    .  ..........++++++.+++..  .
T Consensus        89 ~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~--------------------~--~~~~~~~~~~~s~dg~~~~v~~~~~  146 (373)
T d2madh_          89 RIAKGKRTDYVEVFDPVTFLPIADIELPDAPR--------------------F--DVGPYSWMNANTPNNADLLFFQFAA  146 (373)
T ss_pred             cccccccceEEEEEECCCCcEEEEEecCCcce--------------------e--EeccCCCcEEEEeCCCcEEEEEEcC
Confidence            34445678899999987765433221111000                    0  0011123356788888766554  4


Q ss_pred             CCeEEEEECCCceeeEEEcCCcccEEEEEecCC-EEEEEeCCCcEEEEECCCCcEEEEecccC------ccEEEEEEcCC
Q psy9182         253 DNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDER-VIISGSSDSTVRVWDVNTGEMVNTLIHHC------EAVLHLRFSNG  325 (486)
Q Consensus       253 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------~~i~~~~~~~~  325 (486)
                      ++.+.+|+....+.........  ...+..+++ .+++.+.||.+.+||...++.......+.      .......+.++
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (373)
T d2madh_         147 GPAVGLVVQGGSSDDQLLSSPT--CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS  224 (373)
T ss_pred             CCceEEeeccCCeEEEEeccce--eEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCC
Confidence            5678999988877665544221  122334554 55788899999999999887766553321      12233444443


Q ss_pred             -eEEEEeCCCcEEEEECCCCCceeeEEeeecCc------------ccEEEEEe----------CCCEEEEEeCCCcEEEE
Q psy9182         326 -MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHR------------AAVNVVDF----------DEKYIVSASGDRTIKVW  382 (486)
Q Consensus       326 -~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------------~~v~~~~~----------~~~~l~~~~~d~~i~iw  382 (486)
                       .++..+.++.+.+|+........... ...+.            ........          ++..++....++.+.+|
T Consensus       225 ~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~  303 (373)
T d2madh_         225 GRIVWPVYSGKILQADISAAGATNKAP-IDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV  303 (373)
T ss_pred             ceEEEecCCceEEEEEcCCCeEEEEEe-eccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEE
Confidence             66677788999999987764321111 11110            11111111          34455566677889999


Q ss_pred             ECCCceEEEEEcCCcccEEEEEe--CCC--EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         383 NTSSCEFVRTLNGHKRGIACLQY--RDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       383 d~~~~~~~~~~~~~~~~v~~~~~--~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      |..+++.+..+. +...+..+.+  +|+  ++++++.|+.|++||+.+++.+..+..+....+.|++
T Consensus       304 d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~  369 (373)
T d2madh_         304 TGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSV  369 (373)
T ss_pred             ECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEE
Confidence            999999888876 4455666666  566  4567889999999999999999999988777777776

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.74  E-value=5.8e-15  Score=132.24  Aligned_cols=236  Identities=16%  Similarity=0.145  Sum_probs=167.5

Q ss_pred             cccccCCccCcceE-EEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCCCCCc
Q psy9182         106 DFISLLPNFDEKYI-VSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSSHDDT  184 (486)
Q Consensus       106 ~~~~~~~s~~~~~l-~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s~dg~  184 (486)
                      .+..++++|||++| ++++.++.|++||+.+++.+.++..|.. +..++++                             
T Consensus        33 ~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~-----------------------------   82 (301)
T d1l0qa2          33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVS-----------------------------   82 (301)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEEC-----------------------------
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-ccccccc-----------------------------
Confidence            35667899999987 5677899999999999998888876653 3444442                             


Q ss_pred             ceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE-EEEEecCCeEEEEECCC
Q psy9182         185 ILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK-IVSGLRDNTIKVWDRVS  263 (486)
Q Consensus       185 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~dg~i~i~d~~~  263 (486)
                                                                               +++.. ++++..++.+.+|+..+
T Consensus        83 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~  105 (301)
T d1l0qa2          83 ---------------------------------------------------------PDGKQVYVTNMASSTLSVIDTTS  105 (301)
T ss_dssp             ---------------------------------------------------------TTSSEEEEEETTTTEEEEEETTT
T ss_pred             ---------------------------------------------------------cccccccccccccceeeeccccc
Confidence                                                                     23333 34455677899999999


Q ss_pred             ceeeEEEcCCcccEEEEEe--cCCEEE-EEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeC-CCcEE
Q psy9182         264 LQCIKVLTGHTGSVLCLQY--DERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSK-DRSIA  337 (486)
Q Consensus       264 ~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~-dg~i~  337 (486)
                      ++....+..+. ...++.+  ++..++ ++..++.+.+|+..++..+..+..+ .....+.++++  .++++.. ++.+.
T Consensus       106 ~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (301)
T d1l0qa2         106 NTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSIS  183 (301)
T ss_dssp             TEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             ceeeeeccccc-cceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC-CCceEEEeeccccceeeecccccccc
Confidence            98888887554 4455555  676654 5556788999999999888877654 44677777754  5555554 46677


Q ss_pred             EEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC---CCcEEEEECCCceEEEEEcCCcccEEEEEe--CCCEE
Q psy9182         338 VWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG---DRTIKVWNTSSCEFVRTLNGHKRGIACLQY--RDRLV  410 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l  410 (486)
                      +|+....+..   .... .......+.+  ++..++.+..   ++.|.+||+.+++.+..+..+. .+..+++  +|++|
T Consensus       184 ~~~~~~~~~~---~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~-~~~~va~spdg~~l  258 (301)
T d1l0qa2         184 VIDTVTNSVI---DTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKV  258 (301)
T ss_dssp             EEETTTTEEE---EEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEE
T ss_pred             cccccceeee---eccc-ccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCC-CEEEEEEeCCCCEE
Confidence            7776655433   2222 2233445555  7777665543   4679999999999988887543 4677777  57776


Q ss_pred             -EEEeCCCcEEEEECCCCeeeEEecC
Q psy9182         411 -VSGSSDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       411 -~~~~~dg~v~iwd~~~~~~~~~~~~  435 (486)
                       ++++.|+.|++||+++++.+.++.-
T Consensus       259 ~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         259 YVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             EEEECCCCeEEEEECCCCeEEEEEeC
Confidence             5777899999999999999988753

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.73  E-value=1.9e-15  Score=139.05  Aligned_cols=295  Identities=13%  Similarity=0.032  Sum_probs=186.2

Q ss_pred             ccCCccCcceEEEe-----ecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeec-----
Q psy9182         109 SLLPNFDEKYIVSA-----SGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS-----  178 (486)
Q Consensus       109 ~~~~s~~~~~l~tg-----~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s-----  178 (486)
                      ..+++||+++++..     ..++.|.+||..+++.+.++..+..+  .++|+               +|+++|+.     
T Consensus         6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~S---------------pDg~~l~v~~~~~   68 (355)
T d2bbkh_           6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVA---------------DDGSFIAHASTVF   68 (355)
T ss_dssp             CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEEC---------------TTSSCEEEEEEEE
T ss_pred             eEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEc---------------CCCCEEEEEeCCC
Confidence            34789999998774     34668999999999999998766544  57776               34444443     


Q ss_pred             -----CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe--
Q psy9182         179 -----SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL--  251 (486)
Q Consensus       179 -----~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--  251 (486)
                           +..|+.|++||..+..............                      .........+++++++++++++.  
T Consensus        69 ~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~s~dg~~~~v~~~~  126 (355)
T d2bbkh_          69 SRIARGERTDYVEVFDPVTLLPTADIELPDAPR----------------------FLVGTYPWMTSLTPDGKTLLFYQFS  126 (355)
T ss_dssp             EETTEEEEEEEEEEECTTTCCEEEEEEETTCCC----------------------CCBSCCGGGEEECTTSSEEEEEECS
T ss_pred             ccccccCCCCEEEEEECCCCCEEEEEecCCcce----------------------eecCCCCceEEEecCCCeeEEecCC
Confidence                 4568899999987654332211100000                      00011223467889999887764  


Q ss_pred             cCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEec------ccCccEEEEEEc--
Q psy9182         252 RDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLI------HHCEAVLHLRFS--  323 (486)
Q Consensus       252 ~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~~~~~i~~~~~~--  323 (486)
                      .+..+.+|+..+++.+..+..+.... .........++.+.||....+............      .+...+....+.  
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (355)
T d2bbkh_         127 PAPAVGVVDLEGKAFKRMLDVPDCYH-IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK  205 (355)
T ss_dssp             SSCEEEEEETTTTEEEEEEECCSEEE-EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred             CCceeeeeecCCCcEeeEEecCCcce-EeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCC
Confidence            45689999999999988887544322 222234444555566666665544333222221      112222233333  


Q ss_pred             CCeEEEEeCCCcEEEEECCCCCceeeEEeeec------------CcccEEEEEeCCCEEEEEeCC----------CcEEE
Q psy9182         324 NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVG------------HRAAVNVVDFDEKYIVSASGD----------RTIKV  381 (486)
Q Consensus       324 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~l~~~~~d----------~~i~i  381 (486)
                      +..++.++.++.+++|++..+..... .....            .......+..++..++....+          ..|.+
T Consensus       206 ~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v  284 (355)
T d2bbkh_         206 AGRLVWPTYTGKIHQIDLSSGDAKFL-PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV  284 (355)
T ss_dssp             TTEEEEEBTTSEEEEEECTTSSCEEC-CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCeEEEecCCCeEEEEecCCCcEEEE-eccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEE
Confidence            44788889999999999987654321 11111            112234455577777665433          36999


Q ss_pred             EECCCceEEEEEcCCcccEEEEEe--CCC--EEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe
Q psy9182         382 WNTSSCEFVRTLNGHKRGIACLQY--RDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF  445 (486)
Q Consensus       382 wd~~~~~~~~~~~~~~~~v~~~~~--~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  445 (486)
                      ||..+++.+..+..+ ..+.++.+  +|+  ++++++.|+.|++||+++++.+..+.++......+.+
T Consensus       285 ~d~~t~~~~~~~~~~-~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~  351 (355)
T d2bbkh_         285 LDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITT  351 (355)
T ss_dssp             EETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEC
T ss_pred             EeCCCCcEEEEecCC-CCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEe
Confidence            999999998887643 34556666  565  4567778999999999999999999877555555544

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.70  E-value=7.1e-16  Score=141.19  Aligned_cols=266  Identities=10%  Similarity=0.049  Sum_probs=172.7

Q ss_pred             cCcceeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEE-E
Q psy9182         171 RDEFQIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIV-S  249 (486)
Q Consensus       171 ~~~~~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~  249 (486)
                      ++++++++++.|++|.+||+.+.+..                            ..+.........-++++|||++++ +
T Consensus         6 ~~~~~l~~~~~~~~v~v~D~~t~~~~----------------------------~t~~~~~~~~p~~l~~spDG~~l~v~   57 (346)
T d1jmxb_           6 AGHEYMIVTNYPNNLHVVDVASDTVY----------------------------KSCVMPDKFGPGTAMMAPDNRTAYVL   57 (346)
T ss_dssp             TTCEEEEEEETTTEEEEEETTTTEEE----------------------------EEEECSSCCSSCEEEECTTSSEEEEE
T ss_pred             CCCcEEEEEcCCCEEEEEECCCCCEE----------------------------EEEEcCCCCCcceEEECCCCCEEEEE
Confidence            57789999999999999998765432                            222222223345677889999875 5


Q ss_pred             EecCCeEEEEECCCceeeEEEcCCcc------cEEEEEe--cCCEEEEEe------------CCCcEEEEECCCCcEEEE
Q psy9182         250 GLRDNTIKVWDRVSLQCIKVLTGHTG------SVLCLQY--DERVIISGS------------SDSTVRVWDVNTGEMVNT  309 (486)
Q Consensus       250 ~~~dg~i~i~d~~~~~~~~~~~~~~~------~v~~~~~--~~~~l~~~~------------~dg~i~vwd~~~~~~~~~  309 (486)
                      +..++.|.+||+.+++.+..+.....      .+..+++  ||+++++++            .++.+.+||..+++....
T Consensus        58 ~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  137 (346)
T d1jmxb_          58 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP  137 (346)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC
T ss_pred             ECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeE
Confidence            56789999999999999887764322      1233444  888887765            467788999887765433


Q ss_pred             eccc--CccEEEEEEcCC-eEEEEeCCCcEEEEECCCCCceeeEEeee------------------cCcccEEEEE----
Q psy9182         310 LIHH--CEAVLHLRFSNG-MMVTCSKDRSIAVWDMVSPNEITLRRVLV------------------GHRAAVNVVD----  364 (486)
Q Consensus       310 ~~~~--~~~i~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~~~~v~~~~----  364 (486)
                      +..+  ...+..+.++++ .+++.  ++.+.+|++.+++.........                  .....+....    
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (346)
T d1jmxb_         138 VRTFPMPRQVYLMRAADDGSLYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIAR  215 (346)
T ss_dssp             SEEEECCSSCCCEEECTTSCEEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEE
T ss_pred             EEeeeccCceEEEEecCCCEEEEe--CCcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeee
Confidence            3221  223444445443 44443  3568899988766543221100                  0001111100    


Q ss_pred             e--CCCEEEEEeCCCcEEEEECCCceEEEE-EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecCcccC
Q psy9182         365 F--DEKYIVSASGDRTIKVWNTSSCEFVRT-LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL  439 (486)
Q Consensus       365 ~--~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~  439 (486)
                      +  ....++++..++.+.+||..++..... +..+...+....+  ++.+++.+. ++.|.+||..+++.+..+. +...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~  293 (346)
T d1jmxb_         216 FKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHT  293 (346)
T ss_dssp             C-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSC
T ss_pred             eccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCcEEEEEc-CCCC
Confidence            0  233444555667799999998876544 4456666666665  355565554 4689999999999988876 4456


Q ss_pred             eEEEEe--cCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         440 VRCIRF--DAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       440 v~~~~~--~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      +.+++|  ||++|++++.||.|++||+++.+
T Consensus       294 ~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~  324 (346)
T d1jmxb_         294 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE  324 (346)
T ss_dssp             CCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred             EEEEEEcCCCCEEEEEeCCCcEEEEECccCC
Confidence            889999  99999999999999999998754

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.70  E-value=2.5e-15  Score=142.02  Aligned_cols=261  Identities=13%  Similarity=0.095  Sum_probs=169.7

Q ss_pred             eeecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCC
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDN  254 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  254 (486)
                      .+++.+.||+|.+||..+.+.                            +..+...  .....++++|||+++++++.||
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v----------------------------~~~~~~g--~~~~~v~fSpDG~~l~~~s~dg   83 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEI----------------------------KTVLDTG--YAVHISRLSASGRYLFVIGRDG   83 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCE----------------------------EEEEECS--SCEEEEEECTTSCEEEEEETTS
T ss_pred             EEEEEcCCCEEEEEECCCCcE----------------------------EEEEeCC--CCeeEEEECCCCCEEEEEcCCC
Confidence            368889999999999866443                            2333322  2345668999999999999999


Q ss_pred             eEEEEECCCceee--EEEc---CCcccEEEEEe--cCCEE-EEEeCCCcEEEEECCCCcEEEEeccc-----------Cc
Q psy9182         255 TIKVWDRVSLQCI--KVLT---GHTGSVLCLQY--DERVI-ISGSSDSTVRVWDVNTGEMVNTLIHH-----------CE  315 (486)
Q Consensus       255 ~i~i~d~~~~~~~--~~~~---~~~~~v~~~~~--~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~-----------~~  315 (486)
                      .|++||+.+++..  ..++   .|.+.+.+..|  ||++| ++++.++.|++||..+++.+..+..+           ..
T Consensus        84 ~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~  163 (432)
T d1qksa2          84 KVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP  163 (432)
T ss_dssp             EEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCC
T ss_pred             CEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCC
Confidence            9999999887643  3333   34444454444  78876 67888999999999999998877543           23


Q ss_pred             cEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeC-CCcEEEEECCCceE
Q psy9182         316 AVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASG-DRTIKVWNTSSCEF  389 (486)
Q Consensus       316 ~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~i~iwd~~~~~~  389 (486)
                      ....+.++++   .+++...++.|.+||..+.+.......  .+......+.+  +|+++++++. ++.+.++|..+++.
T Consensus       164 ~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i--~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~  241 (432)
T d1qksa2         164 RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL  241 (432)
T ss_dssp             CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred             ceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEE--cccCccccceECCCCCEEEEeccccceEEEeecccceE
Confidence            4456667653   456677789999999988765543333  23344555555  8888777764 56799999999888


Q ss_pred             EEEEcC-----CcccEEEEEeC--CCEEEEEe-CCCcEEEEECCCC-------eeeEEecC-------------------
Q psy9182         390 VRTLNG-----HKRGIACLQYR--DRLVVSGS-SDNTIRLWDIECG-------ACLRVLEG-------------------  435 (486)
Q Consensus       390 ~~~~~~-----~~~~v~~~~~~--~~~l~~~~-~dg~v~iwd~~~~-------~~~~~~~~-------------------  435 (486)
                      +..+..     |..........  +...++.. .++.|.+|+....       +....+..                   
T Consensus       242 ~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~  321 (432)
T d1qksa2         242 VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYV  321 (432)
T ss_dssp             EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred             EEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceee
Confidence            776642     22233333332  22333332 3677777776432       12222211                   


Q ss_pred             ------cccCeEEEE-ecCCEEEEEeCCCcEEEEeCCCC
Q psy9182         436 ------HEELVRCIR-FDAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       436 ------h~~~v~~~~-~~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                            |.....+++ +|++.|++++.|+.+++|++.+.
T Consensus       322 ~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~~  360 (432)
T d1qksa2         322 DATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEW  360 (432)
T ss_dssp             ECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHH
T ss_pred             cccCCCCCCeeeEEEEEechhhcccccCCceEecccccc
Confidence                  111122333 38888888888899999987543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.67  E-value=9.8e-14  Score=128.41  Aligned_cols=228  Identities=9%  Similarity=-0.033  Sum_probs=150.8

Q ss_pred             eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCCcccEEE---------EEecCCEEEEE--eCCCc
Q psy9182         237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGHTGSVLC---------LQYDERVIISG--SSDST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~v~~---------~~~~~~~l~~~--~~dg~  295 (486)
                      ...++|||++++++.          .++.|.+||..+++.+..+..+......         ++.+++.++..  ..++.
T Consensus        70 ~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  149 (373)
T d2madh_          70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCc
Confidence            467899999998875          4578999999999999888766554432         33366554443  34567


Q ss_pred             EEEEECCCCcEEEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCceeeEEee---ecCcccEEEEEe-CCC
Q psy9182         296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEITLRRVL---VGHRAAVNVVDF-DEK  368 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~v~~~~~-~~~  368 (486)
                      +.+|+..+.+......    ...++.++++   .+++.+.|+.+.+||....+........   .+.........+ .+.
T Consensus       150 ~~~~~~~~~~~~~~~~----~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (373)
T d2madh_         150 VGLVVQGGSSDDQLLS----SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG  225 (373)
T ss_pred             eEEeeccCCeEEEEec----cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCc
Confidence            7888877766554443    2345555532   6678889999999999887654332211   111222233344 334


Q ss_pred             EEEEEeCCCcEEEEECCCceEEE--EEcCCccc------------EEEEEe----------CCCEEEEEeCCCcEEEEEC
Q psy9182         369 YIVSASGDRTIKVWNTSSCEFVR--TLNGHKRG------------IACLQY----------RDRLVVSGSSDNTIRLWDI  424 (486)
Q Consensus       369 ~l~~~~~d~~i~iwd~~~~~~~~--~~~~~~~~------------v~~~~~----------~~~~l~~~~~dg~v~iwd~  424 (486)
                      .++..+.++.+.+|+..+.....  .+..+...            ......          .+..+++...++.+.+||.
T Consensus       226 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~  305 (373)
T d2madh_         226 RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTG  305 (373)
T ss_pred             eEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEEC
Confidence            55666688899999988765332  22111111            111111          2445566777889999999


Q ss_pred             CCCeeeEEecCcccCeEEEEe--cCCE--EEEEeCCCcEEEEeCCCCCC
Q psy9182         425 ECGACLRVLEGHEELVRCIRF--DAKR--IVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       425 ~~~~~~~~~~~h~~~v~~~~~--~~~~--l~s~~~dg~v~iwdl~~~~~  469 (486)
                      .+++.+..+. +...+.+++|  ||+.  +++++.|++|++||+.+++.
T Consensus       306 ~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~  353 (373)
T d2madh_         306 LVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             CCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            9999998876 5567889999  8874  46888999999999998764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1.2e-12  Score=118.81  Aligned_cols=271  Identities=11%  Similarity=0.105  Sum_probs=164.8

Q ss_pred             eEEEeecCceeeecccccccceeee--cCcccceeEEEeecceeEecCCCCceeccCccee-ecCCCCCcceeeeccccc
Q psy9182         118 YIVSASGDRTIKVWNTSSCEFVRTL--NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQI-VSSSHDDTILIWDFLNYS  194 (486)
Q Consensus       118 ~l~tg~~dg~v~iWd~~~~~~~~~l--~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l-~s~s~dg~i~vWd~~~~~  194 (486)
                      .+++++.|++|++|++.+...+..+  ..|.+.+..++|+               +|+++| +++..|+.|++|++....
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~s---------------pDG~~L~v~~~~d~~i~~~~i~~~~   70 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS---------------PDKRYLYVGVRPEFRVLAYRIAPDD   70 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEEC---------------TTSSEEEEEETTTTEEEEEEECTTT
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEe---------------CCCCEEEEEECCCCeEEEEEEeCCC
Confidence            3577789999999999765444333  3577889999998               688777 555668999999985432


Q ss_pred             ccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEec-CCeEEEEECCCceeeEE--Ec
Q psy9182         195 ETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLR-DNTIKVWDRVSLQCIKV--LT  271 (486)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~--~~  271 (486)
                      ...                         ... ..........-+++++||+++++++. ++.|.+|+.........  ..
T Consensus        71 ~~~-------------------------~~~-~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~  124 (333)
T d1ri6a_          71 GAL-------------------------TFA-AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV  124 (333)
T ss_dssp             CCE-------------------------EEE-EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred             CcE-------------------------EEe-eecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceeccccc
Confidence            110                         000 01111222334778999999988875 66899998776654433  33


Q ss_pred             CCcccEEEEEe--cCCEEEEEeC-CCcEEEEECCCCcEEEEe------cccCccEEEEEEcCC--e-EEEEeCCCcEEEE
Q psy9182         272 GHTGSVLCLQY--DERVIISGSS-DSTVRVWDVNTGEMVNTL------IHHCEAVLHLRFSNG--M-MVTCSKDRSIAVW  339 (486)
Q Consensus       272 ~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~~~~~------~~~~~~i~~~~~~~~--~-l~~~~~dg~i~i~  339 (486)
                      .+...+.++.+  +++++++++. +..+.+|+..........      .........+.++++  . +.+....+...++
T Consensus       125 ~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~  204 (333)
T d1ri6a_         125 EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVW  204 (333)
T ss_dssp             CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEE
Confidence            45555655555  7787777664 467999998765432211      223345577888754  3 3444566778888


Q ss_pred             ECCCCCceee-EEeee------cCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCCceEEEEEc---CCcccEEEEEe-
Q psy9182         340 DMVSPNEITL-RRVLV------GHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSSCEFVRTLN---GHKRGIACLQY-  405 (486)
Q Consensus       340 d~~~~~~~~~-~~~~~------~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~-  405 (486)
                      +......... .....      ........+.+  ++++++.. ..++.+.+|++..........   .....+..+++ 
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~s  284 (333)
T d1ri6a_         205 ELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD  284 (333)
T ss_dssp             ESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEEC
T ss_pred             eecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEe
Confidence            8755432211 11110      11223333333  77766554 567789999887644332222   22333444454 


Q ss_pred             -CCCEEEEEe-CCCcEEEE--ECCCCee
Q psy9182         406 -RDRLVVSGS-SDNTIRLW--DIECGAC  429 (486)
Q Consensus       406 -~~~~l~~~~-~dg~v~iw--d~~~~~~  429 (486)
                       +|++|++++ .++.|++|  |.++|++
T Consensus       285 pDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         285 HSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             TTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             CCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence             689877765 46899999  5566754

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.57  E-value=4.9e-13  Score=122.64  Aligned_cols=231  Identities=13%  Similarity=0.048  Sum_probs=151.1

Q ss_pred             eEEEEeCCCEEEEE----------ecCCeEEEEECCCceeeEEEcCCccc---------EEEEEecCCEEEEEe--CCCc
Q psy9182         237 VYCLQYDDHKIVSG----------LRDNTIKVWDRVSLQCIKVLTGHTGS---------VLCLQYDERVIISGS--SDST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~~~~~~~~~~~~---------v~~~~~~~~~l~~~~--~dg~  295 (486)
                      ..+++||+++|++.          ..++.|++||..+++.+..+..+...         ...++.+++.++++.  .+..
T Consensus        51 ~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  130 (355)
T d2bbkh_          51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA  130 (355)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred             ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCce
Confidence            47899999988764          34789999999999988877543221         133444788777664  4578


Q ss_pred             EEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEee---ecCcccEEEEEe--CCCEE
Q psy9182         296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL---VGHRAAVNVVDF--DEKYI  370 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~v~~~~~--~~~~l  370 (486)
                      +.+||..+++.+..+..+... ......+...++.+.|+...++..............   ..+...+....+  ++..+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (355)
T d2bbkh_         131 VGVVDLEGKAFKRMLDVPDCY-HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRL  209 (355)
T ss_dssp             EEEEETTTTEEEEEEECCSEE-EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred             eeeeecCCCcEeeEEecCCcc-eEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeE
Confidence            999999999988877654322 222233445556667777666665544332222111   112222222233  67788


Q ss_pred             EEEeCCCcEEEEECCCceEEE--EEcCCc------------ccEEEEEeCCCEEEEEeCC----------CcEEEEECCC
Q psy9182         371 VSASGDRTIKVWNTSSCEFVR--TLNGHK------------RGIACLQYRDRLVVSGSSD----------NTIRLWDIEC  426 (486)
Q Consensus       371 ~~~~~d~~i~iwd~~~~~~~~--~~~~~~------------~~v~~~~~~~~~l~~~~~d----------g~v~iwd~~~  426 (486)
                      +.++.++.+++|++..++...  ....+.            .....+..++..++....+          +.|.+||..+
T Consensus       210 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t  289 (355)
T d2bbkh_         210 VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT  289 (355)
T ss_dssp             EEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT
T ss_pred             EEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC
Confidence            888999999999998765321  222111            1234455567776655433          4699999999


Q ss_pred             CeeeEEecCcccCeEEEEe--cCC--EEEEEeCCCcEEEEeCCCCCC
Q psy9182         427 GACLRVLEGHEELVRCIRF--DAK--RIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       427 ~~~~~~~~~h~~~v~~~~~--~~~--~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ++.+..+.. ...+.+++|  ||+  ++++++.|+.|++||+.+++.
T Consensus       290 ~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~  335 (355)
T d2bbkh_         290 GERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE  335 (355)
T ss_dssp             CCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred             CcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCE
Confidence            999888864 345788888  776  356677899999999987653

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.52  E-value=5.2e-13  Score=123.32  Aligned_cols=302  Identities=6%  Similarity=-0.095  Sum_probs=183.2

Q ss_pred             ccccccccCCccCcceE--E-EeecC--ceeeecccccccceeeecCcccceeEEEee--cceeEecCCCCceeccCcce
Q psy9182         103 LQRDFISLLPNFDEKYI--V-SASGD--RTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       103 ~~~~~~~~~~s~~~~~l--~-tg~~d--g~v~iWd~~~~~~~~~l~~h~~~V~~~~~~--~~~~~~~~~d~~i~~~~~~~  175 (486)
                      .........+.++++..  + +...+  ..|.+||..+++.+.++.++...  .++|+  ++.++..+.       ....
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~-------~~~~   88 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALAST-------SFAR   88 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEE-------EETT
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcc-------cCcc
Confidence            33444556777888753  2 23344  45777799999999988877654  35554  333332211       1123


Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCC
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDN  254 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg  254 (486)
                      +++++.|+.|.+||..+.+...........                      ...........++++||++++++. .++
T Consensus        89 ~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~----------------------~~~~g~~p~~~a~SpDGk~l~va~~~~~  146 (368)
T d1mdah_          89 SAKGKRTDYVEVFDPVTFLPIADIELPDAP----------------------RFSVGPRVHIIGNCASSACLLFFLFGSS  146 (368)
T ss_dssp             TTSSSEEEEEEEECTTTCCEEEEEEETTSC----------------------SCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred             ccccccCCeEEEEECCCCcEeeeecCCccc----------------------eecccCCccceEECCCCCEEEEEeCCCC
Confidence            556778999999998665433221110000                      000012223467899999988776 578


Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEe------cccCccEEEEEEcCCeEE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTL------IHHCEAVLHLRFSNGMMV  328 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~------~~~~~~i~~~~~~~~~l~  328 (486)
                      .+.+||+.+++....+..+..... .......+++.+.||.+.+++..........      ..+...+....+.++..+
T Consensus       147 ~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (368)
T d1mdah_         147 AAAGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML  225 (368)
T ss_dssp             CEEEEEETTTEEEEEEECSSCCCC-EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred             eEEEEECCCCcEeEEeeccCcceE-ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEE
Confidence            999999999999988876554321 1224567777888999999988655432222      122233344555555444


Q ss_pred             EEeCCCcEEEEECCCCCceeeEEe-----------eecCcccEEEEEeCCCEEEEEeCC---------CcEEEEECCCce
Q psy9182         329 TCSKDRSIAVWDMVSPNEITLRRV-----------LVGHRAAVNVVDFDEKYIVSASGD---------RTIKVWNTSSCE  388 (486)
Q Consensus       329 ~~~~dg~i~i~d~~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~  388 (486)
                      ....++.+++++............           ..........+..++..++....+         ..|.+||..+++
T Consensus       226 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~  305 (368)
T d1mdah_         226 VWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ  305 (368)
T ss_dssp             EECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC
T ss_pred             EEecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc
Confidence            445566777777665443211110           011122344556677666554322         358899999999


Q ss_pred             EEEEEcCCcccEEEEEe--CCC--EEEEEeCCCcEEEEECCCCeeeEEecCcc
Q psy9182         389 FVRTLNGHKRGIACLQY--RDR--LVVSGSSDNTIRLWDIECGACLRVLEGHE  437 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~--~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~h~  437 (486)
                      .+..+... ..+..+.+  +|+  +++++..|+.|++||..+++.+..+....
T Consensus       306 ~~~~~~~~-~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~  357 (368)
T d1mdah_         306 TSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             EeEEecCC-CceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence            88877633 44555555  565  35667788999999999999999987543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=7.5e-12  Score=113.31  Aligned_cols=264  Identities=15%  Similarity=0.222  Sum_probs=159.7

Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe-cCC
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL-RDN  254 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg  254 (486)
                      +++++.|++|++|+++.....                         ..++.+.  ......-++++|||++|++++ .|+
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l-------------------------~~~~~~~--~~~~v~~la~spDG~~L~v~~~~d~   59 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGAL-------------------------TLTQVVD--VPGQVQPMVVSPDKRYLYVGVRPEF   59 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCE-------------------------EEEEEEE--CSSCCCCEEECTTSSEEEEEETTTT
T ss_pred             EEECCCCCcEEEEEEcCCCCe-------------------------EEEEEEc--CCCCEeEEEEeCCCCEEEEEECCCC
Confidence            577788999999998542210                         1112222  123344568899999986655 589


Q ss_pred             eEEEEECCCceeeEEEc---CCcccEEEEEe--cCCEEEEEeC-CCcEEEEECCCCcEEEEe--cccCccEEEEEEcCC-
Q psy9182         255 TIKVWDRVSLQCIKVLT---GHTGSVLCLQY--DERVIISGSS-DSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFSNG-  325 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~---~~~~~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~~~~~~~~--~~~~~~i~~~~~~~~-  325 (486)
                      .|++|++........+.   .+...+..+++  ||++|++++. ++.+.+|+..........  ..+...+.++.++++ 
T Consensus        60 ~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~  139 (333)
T d1ri6a_          60 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN  139 (333)
T ss_dssp             EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS
T ss_pred             eEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecc
Confidence            99999987654332221   23334455655  8898888875 678999988766554333  344556677777754 


Q ss_pred             -eEEEEe-CCCcEEEEECCCCCceeeEE---eeecCcccEEEEEe--CCCEEEEEe-CCCcEEEEECCCce----EEEEE
Q psy9182         326 -MMVTCS-KDRSIAVWDMVSPNEITLRR---VLVGHRAAVNVVDF--DEKYIVSAS-GDRTIKVWNTSSCE----FVRTL  393 (486)
Q Consensus       326 -~l~~~~-~dg~i~i~d~~~~~~~~~~~---~~~~~~~~v~~~~~--~~~~l~~~~-~d~~i~iwd~~~~~----~~~~~  393 (486)
                       .+++++ .+..+.+|+...........   ...........+.+  ++.+++... ..+...+|+.....    .....
T Consensus       140 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~  219 (333)
T d1ri6a_         140 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL  219 (333)
T ss_dssp             SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred             eeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeee
Confidence             555554 56679999987765432211   11223344456666  566665544 55677788764421    22222


Q ss_pred             cC------CcccEEEE--EeCCCEEE-EEeCCCcEEEEECCCCeeeEEec---CcccCeEEEEe--cCCEEEEEeC-CCc
Q psy9182         394 NG------HKRGIACL--QYRDRLVV-SGSSDNTIRLWDIECGACLRVLE---GHEELVRCIRF--DAKRIVSGAY-DGK  458 (486)
Q Consensus       394 ~~------~~~~v~~~--~~~~~~l~-~~~~dg~v~iwd~~~~~~~~~~~---~h~~~v~~~~~--~~~~l~s~~~-dg~  458 (486)
                      ..      .......+  +.++++++ ++..++.+.+|++..........   .+...+.+++|  ||++|++++. ++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~  299 (333)
T d1ri6a_         220 DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHH  299 (333)
T ss_dssp             ECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCE
T ss_pred             eeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCe
Confidence            11      11223333  34566555 45567899999987654433332   23455778888  8998877764 688


Q ss_pred             EEEEeCCC
Q psy9182         459 IKVWNLVA  466 (486)
Q Consensus       459 v~iwdl~~  466 (486)
                      |++|+++.
T Consensus       300 v~v~~id~  307 (333)
T d1ri6a_         300 ISVYEIVG  307 (333)
T ss_dssp             EEEEEEET
T ss_pred             EEEEEEEC
Confidence            99997754

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.33  E-value=3.6e-11  Score=110.66  Aligned_cols=231  Identities=8%  Similarity=-0.038  Sum_probs=147.5

Q ss_pred             eEEEEeCCCEEEEEe----------cCCeEEEEECCCceeeEEEcCCccc---------EEEEEecCCEEEEEe-CCCcE
Q psy9182         237 VYCLQYDDHKIVSGL----------RDNTIKVWDRVSLQCIKVLTGHTGS---------VLCLQYDERVIISGS-SDSTV  296 (486)
Q Consensus       237 v~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~---------v~~~~~~~~~l~~~~-~dg~i  296 (486)
                      ...+++|++.+++.+          .|+.|.+||..+++.+..+..+...         -..++.||++++++. .++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            567889999888754          4678999999999998877643221         234555898888775 57999


Q ss_pred             EEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEE---eeecCcccEEEEEeCCCEEEEE
Q psy9182         297 RVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRR---VLVGHRAAVNVVDFDEKYIVSA  373 (486)
Q Consensus       297 ~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~l~~~  373 (486)
                      .+||+.+++....+..+..... ....+..+++.+.||.+.++++..........   ....+...+....++....+..
T Consensus       149 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (368)
T d1mdah_         149 AGLSVPGASDDQLTKSASCFHI-HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVW  227 (368)
T ss_dssp             EEEEETTTEEEEEEECSSCCCC-EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred             EEEECCCCcEeEEeeccCcceE-ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEE
Confidence            9999999999888766543321 22334577778889999999887654332111   1112223333344422222222


Q ss_pred             eCCCcEEEEECCCceEEEEEc--C------------CcccEEEEEeCCCEEEEEeCC---------CcEEEEECCCCeee
Q psy9182         374 SGDRTIKVWNTSSCEFVRTLN--G------------HKRGIACLQYRDRLVVSGSSD---------NTIRLWDIECGACL  430 (486)
Q Consensus       374 ~~d~~i~iwd~~~~~~~~~~~--~------------~~~~v~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~~  430 (486)
                      ...+.+.+++...+.......  .            .......+..++..++....+         ..|.+||..+++.+
T Consensus       228 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~  307 (368)
T d1mdah_         228 AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS  307 (368)
T ss_dssp             CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE
T ss_pred             ecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEe
Confidence            334556666665544332211  1            112234556666665544322         35999999999988


Q ss_pred             EEecCcccCeEEEEe--cCCE--EEEEeCCCcEEEEeCCCCCC
Q psy9182         431 RVLEGHEELVRCIRF--DAKR--IVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       431 ~~~~~h~~~v~~~~~--~~~~--l~s~~~dg~v~iwdl~~~~~  469 (486)
                      ..+.. ...+.+++|  ||+.  ++++..|+.|++||..+++.
T Consensus       308 ~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~  349 (368)
T d1mdah_         308 GPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             ECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred             EEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            87763 456788888  7763  45667899999999987653

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.22  E-value=1.7e-09  Score=102.69  Aligned_cols=151  Identities=16%  Similarity=0.075  Sum_probs=99.3

Q ss_pred             ccccccccccCCccCcceEEEeecCceeeecccccccceeee-----cCcccceeEEEeecceeEecCCCCceeccCcce
Q psy9182         101 PMLQRDFISLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTL-----NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQ  175 (486)
Q Consensus       101 ~~~~~~~~~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l-----~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~  175 (486)
                      ..+......+.+.+++.++..  .|+.+.+||+.+++....+     ..|...|.++.|+               +|+++
T Consensus        13 ~~~~~~~~~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~S---------------pDg~~   75 (470)
T d2bgra1          13 NTYRLKLYSLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSIS---------------PDGQF   75 (470)
T ss_dssp             TCSCCCCCCCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEEC---------------TTSSE
T ss_pred             CceeccccCCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEEC---------------CCCCE
Confidence            334444556677889988775  4788999999999876544     4456789999997               45555


Q ss_pred             eecC---------CCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCE
Q psy9182         176 IVSS---------SHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHK  246 (486)
Q Consensus       176 l~s~---------s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  246 (486)
                      |+.+         +.++.+.+||+.++........                              ........++|||+.
T Consensus        76 i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~------------------------------~~~~~~~~~SPDG~~  125 (470)
T d2bgra1          76 ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI------------------------------PNNTQWVTWSPVGHK  125 (470)
T ss_dssp             EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC------------------------------CTTEEEEEECSSTTC
T ss_pred             EEEEECCcceeeeccCceEEEEECCCCcccccccC------------------------------CccccccccccCcce
Confidence            5554         4467788999876654332211                              123345678999999


Q ss_pred             EEEEecCCeEEEEECCCceeeEEEcCCc------------------ccEEEEEe--cCCEEEEEeCCCc-EEEE
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVLTGHT------------------GSVLCLQY--DERVIISGSSDST-VRVW  299 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~v~~~~~--~~~~l~~~~~dg~-i~vw  299 (486)
                      +|.. .++.+.+|+..+++..+....+.                  +....+.|  ||+.|+....|.. +..|
T Consensus       126 ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~  198 (470)
T d2bgra1         126 LAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLI  198 (470)
T ss_dssp             EEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred             eeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceE
Confidence            9985 57789999999887665443221                  11223444  8898888765533 4433

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.00  E-value=2.2e-08  Score=94.84  Aligned_cols=77  Identities=6%  Similarity=0.025  Sum_probs=61.1

Q ss_pred             cccccccCCccCcceEEEee---------cCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcc
Q psy9182         104 QRDFISLLPNFDEKYIVSAS---------GDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEF  174 (486)
Q Consensus       104 ~~~~~~~~~s~~~~~l~tg~---------~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~  174 (486)
                      ...+.+..+||||++|+.++         .++.+.|||+.+++ +..+..|...+..+.|+               +|++
T Consensus        61 ~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~S---------------PDG~  124 (470)
T d2bgra1          61 GHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERIPNNTQWVTWS---------------PVGH  124 (470)
T ss_dssp             SSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCCCTTEEEEEEC---------------SSTT
T ss_pred             cCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccCCccccccccc---------------cCcc
Confidence            44577888999999999874         35788999999877 56688888899999998               6788


Q ss_pred             eeecCCCCCcceeeecccccccc
Q psy9182         175 QIVSSSHDDTILIWDFLNYSETP  197 (486)
Q Consensus       175 ~l~s~s~dg~i~vWd~~~~~~~~  197 (486)
                      .++.. .++.+.+|+..++....
T Consensus       125 ~ia~~-~~~~l~~~~~~~g~~~~  146 (470)
T d2bgra1         125 KLAYV-WNNDIYVKIEPNLPSYR  146 (470)
T ss_dssp             CEEEE-ETTEEEEESSTTSCCEE
T ss_pred             eeeEe-ecccceEEECCCCceee
Confidence            88874 56788999987665443

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.96  E-value=1.4e-09  Score=99.63  Aligned_cols=302  Identities=11%  Similarity=0.005  Sum_probs=158.3

Q ss_pred             EEEeecCceeeecccccccceeeecCcc-cc--eeEE------------------EeecceeEecCCCCceeccCccee-
Q psy9182         119 IVSASGDRTIKVWNTSSCEFVRTLNGHK-RG--IACL------------------QYRDRLVVSGSSDNTIRYRDEFQI-  176 (486)
Q Consensus       119 l~tg~~dg~v~iWd~~~~~~~~~l~~h~-~~--V~~~------------------~~~~~~~~~~~~d~~i~~~~~~~l-  176 (486)
                      +++|+.+|.|+||++.+++.++++.-.. .+  ....                  ...+....   .++   .+||+++ 
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~---t~g---tpDGr~lf   87 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISM---TDG---RYDGKYLF   87 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEE---ETT---EEEEEEEE
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcce---ecc---cCCCCEEE
Confidence            6778899999999999999888763210 00  0000                  00000000   001   1567766 


Q ss_pred             ecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCC--EEEEEecCC
Q psy9182         177 VSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDH--KIVSGLRDN  254 (486)
Q Consensus       177 ~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg  254 (486)
                      ++...+++|.++|+.+.+....                            +.........-.+++++++  +++..+.+.
T Consensus        88 V~d~~~~rVavIDl~t~k~~~i----------------------------i~iP~g~gphgi~~spdg~t~YV~~~~~~~  139 (441)
T d1qnia2          88 INDKANTRVARIRLDIMKTDKI----------------------------THIPNVQAIHGLRLQKVPKTNYVFCNAEFV  139 (441)
T ss_dssp             EEETTTTEEEEEETTTTEEEEE----------------------------EECTTCCCEEEEEECCSSBCCEEEEEECSC
T ss_pred             EEcCCCCEEEEEECCCCcEeeE----------------------------EecCCCCCccceEEeccCCEEEEEeccCCc
Confidence            5556788999999876543221                            1111123334456677776  444443332


Q ss_pred             -----------------eEEEEECCCceeeEEEcCCccc-EEEEEecCCEEEEEeCCC-cEEEEECCCCcEEEEecccCc
Q psy9182         255 -----------------TIKVWDRVSLQCIKVLTGHTGS-VLCLQYDERVIISGSSDS-TVRVWDVNTGEMVNTLIHHCE  315 (486)
Q Consensus       255 -----------------~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~  315 (486)
                                       .+..+|..+.+....+...... -..+..+|+++++++.+. .+..++..+......+.....
T Consensus       140 v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~  219 (441)
T d1qnia2         140 IPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV  219 (441)
T ss_dssp             EESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEH
T ss_pred             ccccCcccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCc
Confidence                             2355788887777666533221 233444888888877653 333334333322211110000


Q ss_pred             cEEEEEEc-CCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEE-EeCCCcEEEEECCCceEE---
Q psy9182         316 AVLHLRFS-NGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVS-ASGDRTIKVWNTSSCEFV---  390 (486)
Q Consensus       316 ~i~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~---  390 (486)
                      + ..+.+. ++..+..+.++.+.+++....+....  ...+....-..++.||+++++ +..+++|.+||+++.+..   
T Consensus       220 p-~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~--IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~  296 (441)
T d1qnia2         220 E-RIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRY--IPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFED  296 (441)
T ss_dssp             H-HHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEE--ECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTT
T ss_pred             c-ceEEEecCCCEEEeCCCCcEEEEcccCCceEEE--EeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhc
Confidence            0 000011 22223334566777776655443322  222222222355569998755 567899999998753210   


Q ss_pred             -----EEEcCC---cccEEEEEeC--CCEEEEEeCCCcEEEEECCC----------CeeeEEe-----cCcccCeEEEEe
Q psy9182         391 -----RTLNGH---KRGIACLQYR--DRLVVSGSSDNTIRLWDIEC----------GACLRVL-----EGHEELVRCIRF  445 (486)
Q Consensus       391 -----~~~~~~---~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~----------~~~~~~~-----~~h~~~v~~~~~  445 (486)
                           ..+.++   .-.....+|+  |+.+.+.+.|..|..|++..          ...+..+     .+|...+.+.++
T Consensus       297 ~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~  376 (441)
T d1qnia2         297 KIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESR  376 (441)
T ss_dssp             SSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTST
T ss_pred             cCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCcccccccc
Confidence                 011111   1122333554  66777888999999999741          1233444     355555555555


Q ss_pred             --cCCEEEEE---eCCC
Q psy9182         446 --DAKRIVSG---AYDG  457 (486)
Q Consensus       446 --~~~~l~s~---~~dg  457 (486)
                        ||++|+++   +.|.
T Consensus       377 ~pdGk~l~s~~k~s~dr  393 (441)
T d1qnia2         377 DADGKWLVVLSKFSKDR  393 (441)
T ss_dssp             TCCCCEEEEEESCCGGG
T ss_pred             CCCCcEEEecCcccccc
Confidence              99999999   4554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.83  E-value=4.7e-07  Score=82.73  Aligned_cols=218  Identities=14%  Similarity=0.135  Sum_probs=134.1

Q ss_pred             EEEEecCCeEEEEECCCceeeEEEcC------------------------------CcccEEEE--EecCCEEEEEe-CC
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVLTG------------------------------HTGSVLCL--QYDERVIISGS-SD  293 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~~~------------------------------~~~~v~~~--~~~~~~l~~~~-~d  293 (486)
                      +++|+.+|.|++|++.+++.++++..                              |.......  .+||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            67888999999999999998888642                              11122222  34888886654 67


Q ss_pred             CcEEEEECCCCcEEEEecc-cCccEEEEEEcCC----eEEEEeCCC-----------------cEEEEECCCCCceeeEE
Q psy9182         294 STVRVWDVNTGEMVNTLIH-HCEAVLHLRFSNG----MMVTCSKDR-----------------SIAVWDMVSPNEITLRR  351 (486)
Q Consensus       294 g~i~vwd~~~~~~~~~~~~-~~~~i~~~~~~~~----~l~~~~~dg-----------------~i~i~d~~~~~~~~~~~  351 (486)
                      +.|.++|+.+++....+.. .......++++++    +++..+.+.                 .+..+|..+.+...  +
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~--q  171 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAW--Q  171 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEE--E
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeE--E
Confidence            8999999999998876643 4567888888753    444444332                 23446766655432  2


Q ss_pred             eeecCcccEEEEEeCCCEEEEEeCC-----------------------------------------CcEEEEECCCceEE
Q psy9182         352 VLVGHRAAVNVVDFDEKYIVSASGD-----------------------------------------RTIKVWNTSSCEFV  390 (486)
Q Consensus       352 ~~~~~~~~v~~~~~~~~~l~~~~~d-----------------------------------------~~i~iwd~~~~~~~  390 (486)
                      ...+....-..+.++|+++++++.+                                         +.+.+++....+.+
T Consensus       172 I~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~  251 (441)
T d1qnia2         172 VIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFT  251 (441)
T ss_dssp             EEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSE
T ss_pred             EecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceE
Confidence            2222222233344477777766543                                         34445554555555


Q ss_pred             EEEcCCcccE-EEEEeCCCEEE-EEeCCCcEEEEECCCCeee--------EEecCc---ccCeEEEEe--cCCEEEEEeC
Q psy9182         391 RTLNGHKRGI-ACLQYRDRLVV-SGSSDNTIRLWDIECGACL--------RVLEGH---EELVRCIRF--DAKRIVSGAY  455 (486)
Q Consensus       391 ~~~~~~~~~v-~~~~~~~~~l~-~~~~dg~v~iwd~~~~~~~--------~~~~~h---~~~v~~~~~--~~~~l~s~~~  455 (486)
                      ..+.....+- ..++.+|++++ ++..+++|.|||+++.+..        ..+.++   .-.....+|  +|+.+.+...
T Consensus       252 ~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~  331 (441)
T d1qnia2         252 RYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFI  331 (441)
T ss_dssp             EEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETT
T ss_pred             EEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccc
Confidence            6665443321 35566788765 5678999999998642210        001111   112344577  4556777889


Q ss_pred             CCcEEEEeCCC
Q psy9182         456 DGKIKVWNLVA  466 (486)
Q Consensus       456 dg~v~iwdl~~  466 (486)
                      |..|..|++..
T Consensus       332 ds~v~kw~~~~  342 (441)
T d1qnia2         332 DSQVCKWNIAD  342 (441)
T ss_dssp             TTEEEEEEHHH
T ss_pred             cceEEEeccch
Confidence            99999999853

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.57  E-value=9.6e-05  Score=63.70  Aligned_cols=224  Identities=13%  Similarity=0.186  Sum_probs=140.2

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC------cccEEEEEe--c-CCEEEEE-eCCCcEEEEECCCCcE
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH------TGSVLCLQY--D-ERVIISG-SSDSTVRVWDVNTGEM  306 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~v~~~~~--~-~~~l~~~-~~dg~i~vwd~~~~~~  306 (486)
                      -+++.++++.+++-..++.|++||.. ++.+..+...      ......+.+  + +..+++. +.++.|..++. .++.
T Consensus        27 gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~g~~  104 (279)
T d1q7fa_          27 GVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQF  104 (279)
T ss_dssp             EEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCE
T ss_pred             EEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccc-cccc
Confidence            45667788888877788899999954 6666666321      112234444  2 3344433 34567777775 4666


Q ss_pred             EEEecc-cCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEE
Q psy9182         307 VNTLIH-HCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV  381 (486)
Q Consensus       307 ~~~~~~-~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i  381 (486)
                      ...+.. .......+++.+  ..+++....+.+.+++... +..... ....+......+.+  +++.+++....+.|++
T Consensus       105 ~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g-~~~~~~-g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~  182 (279)
T d1q7fa_         105 VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKF-GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKV  182 (279)
T ss_dssp             EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEE-ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEE
T ss_pred             eeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC-ceeecc-cccccccccceeeeccceeEEeeeccccceee
Confidence            666532 334456677754  3555556667788877543 222211 12234445556666  5667777778889999


Q ss_pred             EECCCceEEEEEc--CCcccEEEEEeC--CCEEEEEeC-CCcEEEEECCCCeeeEEecCc--ccCeEEEEe--cCCEEEE
Q psy9182         382 WNTSSCEFVRTLN--GHKRGIACLQYR--DRLVVSGSS-DNTIRLWDIECGACLRVLEGH--EELVRCIRF--DAKRIVS  452 (486)
Q Consensus       382 wd~~~~~~~~~~~--~~~~~v~~~~~~--~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~h--~~~v~~~~~--~~~~l~s  452 (486)
                      ||.. ++.+.++.  +.......++++  |+++++-.. ++.|.+|+. +|+.+..+...  ......|++  || .|++
T Consensus       183 ~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG-~l~V  259 (279)
T d1q7fa_         183 FNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG-SVVL  259 (279)
T ss_dssp             EETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT-EEEE
T ss_pred             eecC-CceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCC-cEEE
Confidence            9964 66677764  334445666664  777766543 457999985 58887776433  235678888  55 4666


Q ss_pred             EeCCCcEEEEeCCCC
Q psy9182         453 GAYDGKIKVWNLVAA  467 (486)
Q Consensus       453 ~~~dg~v~iwdl~~~  467 (486)
                      ++.++.|++|.....
T Consensus       260 ~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         260 ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             EETTTEEEEEECSCC
T ss_pred             EeCCCeEEEEEeeee
Confidence            678999999998754

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.43  E-value=0.00019  Score=62.85  Aligned_cols=225  Identities=10%  Similarity=0.049  Sum_probs=129.8

Q ss_pred             EEEEeCCCEEEEEec-------CCeEEEEECCCceeeEEEcCCc----ccEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Q psy9182         238 YCLQYDDHKIVSGLR-------DNTIKVWDRVSLQCIKVLTGHT----GSVLCLQY--DERVIISGSSDSTVRVWDVNTG  304 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~----~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~  304 (486)
                      .++.++|+++++...       +|.|..||..++..........    +.-..+.+  +++.++++...+.+..+|...+
T Consensus        23 pa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~  102 (314)
T d1pjxa_          23 PVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGT  102 (314)
T ss_dssp             EEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSC
T ss_pred             eEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCc
Confidence            356778887665432       4679999988876544433211    22456777  5778888877777889997655


Q ss_pred             cEEEEecccC----ccEEEEEEcCC-eEEEEeC----------------CCcEEEEECCCCCceeeEEeeecCcccEEEE
Q psy9182         305 EMVNTLIHHC----EAVLHLRFSNG-MMVTCSK----------------DRSIAVWDMVSPNEITLRRVLVGHRAAVNVV  363 (486)
Q Consensus       305 ~~~~~~~~~~----~~i~~~~~~~~-~l~~~~~----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~  363 (486)
                      ..........    .....+.+.++ .++.+..                .|.|..++.. ++.....    ..-...+.+
T Consensus       103 ~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~----~~~~~pNGi  177 (314)
T d1pjxa_         103 FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD----TAFQFPNGI  177 (314)
T ss_dssp             EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE----EEESSEEEE
T ss_pred             EEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEee----CCcceeeee
Confidence            3322111111    12355666543 4444332                1234444332 2211111    111122334


Q ss_pred             Ee--CCC-----EEEEEeCCCcEEEEECCCceEE------EEEcCC-cccEEEEEe--CCCEEEEEeCCCcEEEEECCCC
Q psy9182         364 DF--DEK-----YIVSASGDRTIKVWNTSSCEFV------RTLNGH-KRGIACLQY--RDRLVVSGSSDNTIRLWDIECG  427 (486)
Q Consensus       364 ~~--~~~-----~l~~~~~d~~i~iwd~~~~~~~------~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~  427 (486)
                      .+  ++.     +.++-+..+.|..||+.....+      ..+... ....-.+++  +|++.++....+.|.+||.+.+
T Consensus       178 ~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g  257 (314)
T d1pjxa_         178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG  257 (314)
T ss_dssp             EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB
T ss_pred             EECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCC
Confidence            44  332     4444566788888886543222      122221 223345565  4888888888899999999888


Q ss_pred             eeeEEecCcccCeEEEEe--cCCE-EEEEeCCCcEEEEeCCCC
Q psy9182         428 ACLRVLEGHEELVRCIRF--DAKR-IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       428 ~~~~~~~~h~~~v~~~~~--~~~~-l~s~~~dg~v~iwdl~~~  467 (486)
                      +.+..+.......++++|  |++. +++.+.+|.|...++...
T Consensus       258 ~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~  300 (314)
T d1pjxa_         258 QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence            877777776678899999  5654 566677888888887643

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.41  E-value=0.00014  Score=62.57  Aligned_cols=147  Identities=12%  Similarity=0.149  Sum_probs=91.1

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEc--CCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEec-
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLT--GHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLI-  311 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-  311 (486)
                      ..++.+++..+++....+.+.+++. +++.+..+.  .+......+++  +++.+++....+.|++||.. ++.+.++. 
T Consensus       118 ~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~  195 (279)
T d1q7fa_         118 GVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGG  195 (279)
T ss_dssp             EEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESC
T ss_pred             eeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeeccccceeeeecC-Cceeeeecc
Confidence            3445567777777777788888875 455565553  34455666666  56677777778999999964 67777763 


Q ss_pred             -ccCccEEEEEEcCC-eEEEE-eC-CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECC
Q psy9182         312 -HHCEAVLHLRFSNG-MMVTC-SK-DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTS  385 (486)
Q Consensus       312 -~~~~~i~~~~~~~~-~l~~~-~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~  385 (486)
                       +.......++++++ .++++ .. ++.|.+|+. +++....... .........+++  +|. |++++.+..|++|...
T Consensus       196 ~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~-~~~~~~p~~vav~~dG~-l~V~~~n~~v~~fr~~  272 (279)
T d1q7fa_         196 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALES-KVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYV  272 (279)
T ss_dssp             TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEE-SSCCSCEEEEEEETTTE-EEEEETTTEEEEEECS
T ss_pred             cccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeC-CCCCCCEeEEEEeCCCc-EEEEeCCCeEEEEEee
Confidence             23445677888643 34444 33 456999985 3443322211 112223445555  555 5556678899999877


Q ss_pred             Cce
Q psy9182         386 SCE  388 (486)
Q Consensus       386 ~~~  388 (486)
                      ...
T Consensus       273 ~~~  275 (279)
T d1q7fa_         273 QLA  275 (279)
T ss_dssp             CCC
T ss_pred             eec
Confidence            654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.38  E-value=4.7e-05  Score=64.98  Aligned_cols=225  Identities=8%  Similarity=-0.052  Sum_probs=125.7

Q ss_pred             ceEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q psy9182         236 GVYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       236 ~v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~  312 (486)
                      .-+++.++|+..++. +..+.+..++............-......+++  +++.+++....+.+++++-.++..+.... 
T Consensus        17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~~~-   95 (260)
T d1rwia_          17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFD-   95 (260)
T ss_dssp             EEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCC-
T ss_pred             CEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeeeee-
Confidence            345667788866654 45567777765443322221111122344455  67777766666666666655554443322 


Q ss_pred             cCccEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCce
Q psy9182         313 HCEAVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCE  388 (486)
Q Consensus       313 ~~~~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~  388 (486)
                      .......+++.+  +.+++-..+..+..++........  ... ........+.+  +++.+++...++.|..+|.....
T Consensus        96 ~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~--~~~-~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~  172 (260)
T d1rwia_          96 GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV--LPF-TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN  172 (260)
T ss_dssp             SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE--CCC-CSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred             eeeecccccccccceeEeeccccccccccccccceeee--eee-cccCCcceeeecCCCCEeeeccccccccccccccce
Confidence            234567788764  344444455667777665433221  111 11122234554  77877777888889999987654


Q ss_pred             EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEe-cCcccCeEEEEe--cCCEEEEEeCCCcEEEEe
Q psy9182         389 FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DAKRIVSGAYDGKIKVWN  463 (486)
Q Consensus       389 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwd  463 (486)
                      ..............++++  ++++++....+.|..++..... ...+ ...-.....|++  +|+.+++-..++.|+..+
T Consensus       173 ~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         173 QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             EEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-CEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             eeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe-EEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence            333323444556677774  6777777778888888876443 2222 223345678999  667777666667666555


Q ss_pred             CC
Q psy9182         464 LV  465 (486)
Q Consensus       464 l~  465 (486)
                      ..
T Consensus       252 ~~  253 (260)
T d1rwia_         252 SL  253 (260)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.37  E-value=9.7e-05  Score=64.52  Aligned_cols=217  Identities=12%  Similarity=0.035  Sum_probs=132.1

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCc--EEEEe-c
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGE--MVNTL-I  311 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~--~~~~~-~  311 (486)
                      -.++.+||+++++...+++|..++....  ...+......+.++++  +++++++...++.+..++.....  ..... .
T Consensus        32 ~iAv~pdG~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (302)
T d2p4oa1          32 NLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL  109 (302)
T ss_dssp             EEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             CEEECCCCCEEEEeCCCCEEEEEeCCCC--EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeecccc
Confidence            4578889999999999999999985543  2233345567788887  78888888888888888765432  22211 2


Q ss_pred             ccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEEe-------eecCcccEEEEEeCCCE-EEEEeCCCcEEE
Q psy9182         312 HHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRRV-------LVGHRAAVNVVDFDEKY-IVSASGDRTIKV  381 (486)
Q Consensus       312 ~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~-l~~~~~d~~i~i  381 (486)
                      ........+.+.++  .+++.+.++.+..+|...+........       ..........+.+++.. +++.+..+.|..
T Consensus       110 ~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i~~  189 (302)
T d2p4oa1         110 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLR  189 (302)
T ss_dssp             TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred             CCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCeEEe
Confidence            23445677777643  555556778888888776532211110       01122344566775554 445566788888


Q ss_pred             EECCCceEEEEE--cCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEe--cCcccCeEEEEe-----cCCEE
Q psy9182         382 WNTSSCEFVRTL--NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVRCIRF-----DAKRI  450 (486)
Q Consensus       382 wd~~~~~~~~~~--~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~~-----~~~~l  450 (486)
                      ++..........  .........+.+  +|++.++...++.|..++.. ++.....  ...-...++++|     |++.|
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vafg~~~~D~~~L  268 (302)
T d2p4oa1         190 IPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAI  268 (302)
T ss_dssp             EEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEE
T ss_pred             ccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCceEEEEcCCCCCCCEE
Confidence            887654322111  011122223444  58888888889999999876 4443333  333456889999     45667


Q ss_pred             EEEeCC
Q psy9182         451 VSGAYD  456 (486)
Q Consensus       451 ~s~~~d  456 (486)
                      +.++..
T Consensus       269 yvtt~~  274 (302)
T d2p4oa1         269 YVVTNG  274 (302)
T ss_dssp             EEEECT
T ss_pred             EEECCC
Confidence            665543

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.26  E-value=0.00026  Score=61.68  Aligned_cols=190  Identities=11%  Similarity=0.007  Sum_probs=122.0

Q ss_pred             cEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCC--eEEEEeCCCcEEEEECCCCCceeeEE
Q psy9182         276 SVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MMVTCSKDRSIAVWDMVSPNEITLRR  351 (486)
Q Consensus       276 ~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~  351 (486)
                      .+..+++  ||+++++...+++|..||... +. ..+......+..+++.++  ++++...++.+..++...........
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~~-~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~  106 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  106 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTC-CE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCC-CE-EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeec
Confidence            3555566  889999988899999998653 32 334444567888988754  67777788888888876544322222


Q ss_pred             eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCceEEEEEcC----------CcccEEEEEeCCCE-EEEEeCCCc
Q psy9182         352 VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNTSSCEFVRTLNG----------HKRGIACLQYRDRL-VVSGSSDNT  418 (486)
Q Consensus       352 ~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------~~~~v~~~~~~~~~-l~~~~~dg~  418 (486)
                      ...........+.+  +++++++.+.++.+..+|...+........          .......+.+++.. +++.+..+.
T Consensus       107 ~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~  186 (302)
T d2p4oa1         107 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKML  186 (302)
T ss_dssp             EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTE
T ss_pred             cccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCe
Confidence            22233445667766  677777778888999999887654332221          11234566776554 555567888


Q ss_pred             EEEEECCCCeeeEE--ecCcccCeEEEEe--cCCEEEEEeCCCcEEEEeCCCC
Q psy9182         419 IRLWDIECGACLRV--LEGHEELVRCIRF--DAKRIVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       419 v~iwd~~~~~~~~~--~~~h~~~v~~~~~--~~~~l~s~~~dg~v~iwdl~~~  467 (486)
                      |..++.........  ...+......+++  +|+..++...++.|..++.+..
T Consensus       187 i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~  239 (302)
T d2p4oa1         187 LLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS  239 (302)
T ss_dssp             EEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC
T ss_pred             EEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC
Confidence            88888765432211  1112233456788  7887777778899998876643

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.25  E-value=0.00012  Score=62.33  Aligned_cols=143  Identities=10%  Similarity=0.018  Sum_probs=80.6

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCCcEEEEECCCCcEEEEecccCc
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDSTVRVWDVNTGEMVNTLIHHCE  315 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~  315 (486)
                      +++.++++++++-..+..+..++..................++++  +++.+++...++.|..+|...............
T Consensus       103 iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~  182 (260)
T d1rwia_         103 LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT  182 (260)
T ss_dssp             EEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC
T ss_pred             ccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccC
Confidence            455567777776666667777775543322211111223345555  677777778888899999876544433333445


Q ss_pred             cEEEEEEcC--CeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCCcEEEEE
Q psy9182         316 AVLHLRFSN--GMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWN  383 (486)
Q Consensus       316 ~i~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd  383 (486)
                      ....+++++  +++++....+.|..++.......   ......-.....+++  +|+++++-..+++|+.++
T Consensus       183 ~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~---~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         183 APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             SEEEEEECTTCCEEEEETTTTEEEEECTTCSCCE---ECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             CCccceeeeeeeeeeeecCCCEEEEEeCCCCeEE---EEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEEe
Confidence            567788864  35555556777888876544321   111112234456666  455555545555555444

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.20  E-value=0.0009  Score=63.94  Aligned_cols=97  Identities=14%  Similarity=0.129  Sum_probs=64.2

Q ss_pred             CcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCc----ccCeEEEEecCCE-E
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH----EELVRCIRFDAKR-I  450 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~-l  450 (486)
                      |.|.-||+.+++.+-+........ -.+.-.+.+++.|+.||.++.+|.++|+.+.++...    ..+++- ..||+. +
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY-~~dGkQYv  531 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTY-THKGTQYV  531 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEE
T ss_pred             ceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEE-EECCEEEE
Confidence            568888988888776554221111 123346788889999999999999999999888543    234433 247764 4


Q ss_pred             EEEe-----------------------------------CCCcEEEEeCCCCCCCCCCc
Q psy9182         451 VSGA-----------------------------------YDGKIKVWNLVAALDPRAPT  474 (486)
Q Consensus       451 ~s~~-----------------------------------~dg~v~iwdl~~~~~~~~~~  474 (486)
                      +...                                   ..|.|.+|.|..+.+.+.|.
T Consensus       532 av~~G~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~vf~l~g~~~~~~~~  590 (596)
T d1w6sa_         532 AIYYGVGGWPGVGLVFDLADPTAGLGAVGAFKKLANYTQMGGGVVVFSLDGKGPYDDPN  590 (596)
T ss_dssp             EEEECCCTTTTHHHHHTCCCTTCGGGHHHHTTTGGGTCCCCCEEEEEEETTCCTTSSTT
T ss_pred             EEEecCCccccccccccccCccccccccccccccccccCCCCEEEEEEeCCCCCCCCCC
Confidence            4322                                   13678999998876654443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.18  E-value=0.0031  Score=59.82  Aligned_cols=76  Identities=17%  Similarity=0.098  Sum_probs=50.9

Q ss_pred             CcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCc----ccCeEEEEecCCE-E
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH----EELVRCIRFDAKR-I  450 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~-l  450 (486)
                      |.|.-+|+.+++.+-+........ ..+...+.++++|+.||.++.+|.++|+.+.+++-.    ..+++- ..||+. +
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty-~~dGkqYi  522 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTY-SFKGKQYI  522 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEE
T ss_pred             ccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEE-EECCEEEE
Confidence            468888888888876665222111 123446788889999999999999999999888533    223332 337764 4


Q ss_pred             EEE
Q psy9182         451 VSG  453 (486)
Q Consensus       451 ~s~  453 (486)
                      ++.
T Consensus       523 ~v~  525 (571)
T d2ad6a1         523 GSM  525 (571)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.16  E-value=0.0035  Score=59.35  Aligned_cols=97  Identities=12%  Similarity=0.165  Sum_probs=64.8

Q ss_pred             CcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc---cCeEEEEecCC-EEE
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE---ELVRCIRFDAK-RIV  451 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~---~~v~~~~~~~~-~l~  451 (486)
                      |.|.-||+.+++.+-+........ -.+.-.+.++++|+.||.++.+|.++|+.+.+++-..   ....+...+|+ +|+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA  517 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEE
Confidence            568889999999887765322111 2345568899999999999999999999998886432   22222234776 444


Q ss_pred             EEeCC--------------------CcEEEEeCCCCCCCCCC
Q psy9182         452 SGAYD--------------------GKIKVWNLVAALDPRAP  473 (486)
Q Consensus       452 s~~~d--------------------g~v~iwdl~~~~~~~~~  473 (486)
                      ..+..                    +.|.+|.|....+..+|
T Consensus       518 v~aG~g~~~~~~~~~~~~~~~~~~g~~l~~F~L~g~~~~~~~  559 (560)
T d1kv9a2         518 IMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQLPPP  559 (560)
T ss_dssp             EEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCCCCCC
T ss_pred             EEeCCCcccccccccccccccCCCCCEEEEEEeCCCCCCCCC
Confidence            43322                    36888888866554444

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.11  E-value=0.0012  Score=57.65  Aligned_cols=187  Identities=12%  Similarity=0.200  Sum_probs=111.4

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcc----cEEEEEe--cCCEEEEEeC---------------CCc
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTG----SVLCLQY--DERVIISGSS---------------DST  295 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~v~~~~~--~~~~l~~~~~---------------dg~  295 (486)
                      -+.+.++++.++++...+.|..++..............+    ....+.+  +|++.++-..               .|.
T Consensus        75 Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~  154 (314)
T d1pjxa_          75 GCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGS  154 (314)
T ss_dssp             EEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred             eEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCce
Confidence            355677888888888777888888765543221111111    2344555  5666555321               234


Q ss_pred             EEEEECCCCcEEEEecccCccEEEEEEcC--C-----eEEEEeCCCcEEEEECCCCCceeeEEeee---c-CcccEEEEE
Q psy9182         296 VRVWDVNTGEMVNTLIHHCEAVLHLRFSN--G-----MMVTCSKDRSIAVWDMVSPNEITLRRVLV---G-HRAAVNVVD  364 (486)
Q Consensus       296 i~vwd~~~~~~~~~~~~~~~~i~~~~~~~--~-----~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~-~~~~v~~~~  364 (486)
                      |..++.. ++..... .....-..+++++  +     ++++-+..+.|..||+.....+.......   . .....-.++
T Consensus       155 v~~~~~d-g~~~~~~-~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGia  232 (314)
T d1pjxa_         155 IYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD  232 (314)
T ss_dssp             EEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred             EEEEeec-CceeEee-CCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeE
Confidence            4444432 3332222 1122234566643  2     34445677889999887554433222211   1 122334566


Q ss_pred             e--CCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeC--CC-EEEEEeCCCcEEEEECC
Q psy9182         365 F--DEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       365 ~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~v~iwd~~  425 (486)
                      +  +|++.++....+.|.+||.+.++.+..+.......++++|.  ++ ++++.+.+|.|..+++.
T Consensus       233 vD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             EecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            6  78888887788999999999888877777776778888884  44 55666778888888874

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.08  E-value=0.005  Score=58.45  Aligned_cols=91  Identities=10%  Similarity=0.128  Sum_probs=61.5

Q ss_pred             CcEEEEECCCceEEEEEcCCccc-EEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcc----cCeEEEEecCCE-E
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRG-IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE----ELVRCIRFDAKR-I  450 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~-l  450 (486)
                      |.|.-||+.+++.+-+.+..... -..++..+.++++|+.||.++.+|.++|+.+.++.-..    .+++- ..+|+. +
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty-~~~GkQYv  535 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTY-MVDGRQYV  535 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEE
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEE-EECCEEEE
Confidence            45788899999888777643321 13456678899999999999999999999998886432    23322 247764 3


Q ss_pred             EEEeC----------------CCcEEEEeCCCCC
Q psy9182         451 VSGAY----------------DGKIKVWNLVAAL  468 (486)
Q Consensus       451 ~s~~~----------------dg~v~iwdl~~~~  468 (486)
                      +..+.                .+.|.+|.|+...
T Consensus       536 ~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~g~~  569 (573)
T d1kb0a2         536 SVAVGWGGVYGLAARATERQGPGTVYTFVVGGKA  569 (573)
T ss_dssp             EEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBC
T ss_pred             EEEeCCCcccccccccccCCCCCEEEEEEeCCcC
Confidence            33222                2357777776543

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.96  E-value=0.0015  Score=61.96  Aligned_cols=227  Identities=11%  Similarity=0.070  Sum_probs=133.4

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCc---c-cEEE-EEecCCEEEEEeC------CCcEEEEECCCCcEEEEec
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT---G-SVLC-LQYDERVIISGSS------DSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~-~v~~-~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~  311 (486)
                      .+..++.++.||.+...|.++|+.+.......   . .++. -..-+..++.+..      +|.|+-+|+++|+.+..+.
T Consensus       114 ~~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  193 (571)
T d2ad6a1         114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF  193 (571)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             eCCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEe
Confidence            45678889999999999999999887664221   1 1111 1112344555543      6789999999999988763


Q ss_pred             ccC-------------------------------------ccE-EEEEEc--CCeEEEEeC----------------CCc
Q psy9182         312 HHC-------------------------------------EAV-LHLRFS--NGMMVTCSK----------------DRS  335 (486)
Q Consensus       312 ~~~-------------------------------------~~i-~~~~~~--~~~l~~~~~----------------dg~  335 (486)
                      ...                                     ..+ ...+++  .+.++.+..                ...
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~s  273 (571)
T d2ad6a1         194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT  273 (571)
T ss_dssp             SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred             ccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccc
Confidence            211                                     011 112222  334554443                245


Q ss_pred             EEEEECCCCCceeeEEeee--------cCcccEEEEEeCCC---EEEEEeCCCcEEEEECCCceEEEEEcCC--------
Q psy9182         336 IAVWDMVSPNEITLRRVLV--------GHRAAVNVVDFDEK---YIVSASGDRTIKVWNTSSCEFVRTLNGH--------  396 (486)
Q Consensus       336 i~i~d~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------  396 (486)
                      +...|.++++..-..+...        ........+..+++   .++.++.+|.++++|..+++++...+..        
T Consensus       274 vvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~  353 (571)
T d2ad6a1         274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK  353 (571)
T ss_dssp             EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             eeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccccc
Confidence            7778888887654333211        11112223334554   5677889999999999999887543211        


Q ss_pred             ---------------------------------cccEEEEEeCCCEEEEEeC----------------------------
Q psy9182         397 ---------------------------------KRGIACLQYRDRLVVSGSS----------------------------  415 (486)
Q Consensus       397 ---------------------------------~~~v~~~~~~~~~l~~~~~----------------------------  415 (486)
                                                       .....++.....++.....                            
T Consensus       354 ~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (571)
T d2ad6a1         354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP  433 (571)
T ss_dssp             ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeecc
Confidence                                             0001111112223322221                            


Q ss_pred             ---------CCcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         416 ---------DNTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       416 ---------dg~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                               .|.|.-+|+++|+.+.+...-..... .+.-.+..+++|+.||.++.+|.++++.
T Consensus       434 ~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~  497 (571)
T d2ad6a1         434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE  497 (571)
T ss_dssp             CTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcE
Confidence                     25688889999988876642211111 2344678888999999999999998764

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.95  E-value=0.0035  Score=55.83  Aligned_cols=232  Identities=8%  Similarity=0.095  Sum_probs=120.4

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCC-ceeeEEE-cCCcccEEEEE--ecCCE--EEEEe-CCCcEEEEECCC----
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVS-LQCIKVL-TGHTGSVLCLQ--YDERV--IISGS-SDSTVRVWDVNT----  303 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~-~~~~~~v~~~~--~~~~~--l~~~~-~dg~i~vwd~~~----  303 (486)
                      ..-++++++++.|++... +.+..|.+.. +...... .........+.  .+++.  ++++. ..+.|..+.+..    
T Consensus        42 ~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~  120 (365)
T d1jofa_          42 ISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY  120 (365)
T ss_dssp             CSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred             CCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCc
Confidence            345788899999888764 5677776543 2222111 11111112222  25543  33322 234555444321    


Q ss_pred             ---------CcEEEEe----cccCccEEEEEEcCC--eEEEEe-CCCcEEEEECCCCCceeeEEee--ecCcccEEEEEe
Q psy9182         304 ---------GEMVNTL----IHHCEAVLHLRFSNG--MMVTCS-KDRSIAVWDMVSPNEITLRRVL--VGHRAAVNVVDF  365 (486)
Q Consensus       304 ---------~~~~~~~----~~~~~~i~~~~~~~~--~l~~~~-~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~~  365 (486)
                               +......    ......+.++.|+|+  +++++. ....|.+|+.............  .........+.+
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f  200 (365)
T d1jofa_         121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM  200 (365)
T ss_dssp             EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred             ceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEE
Confidence                     1111110    112234678888865  555554 4567888886654433222221  122345566666


Q ss_pred             --CCCEEEEEe-CCCcEEEEECCCceEE--EE---Ec--------------CCcccEE--EEEeCCCEEEEEeC------
Q psy9182         366 --DEKYIVSAS-GDRTIKVWNTSSCEFV--RT---LN--------------GHKRGIA--CLQYRDRLVVSGSS------  415 (486)
Q Consensus       366 --~~~~l~~~~-~d~~i~iwd~~~~~~~--~~---~~--------------~~~~~v~--~~~~~~~~l~~~~~------  415 (486)
                        +++++++.. .+++|.+|+....+..  ..   ..              .+.....  .++.+|++|+++..      
T Consensus       201 ~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~  280 (365)
T d1jofa_         201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL  280 (365)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred             CCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCcc
Confidence              788776555 5788999998765322  11   11              0011122  34456888877642      


Q ss_pred             CCcEEEEECCCCeeeE-Ee-----cCcccCeEEEEe---cCCEEEEEe-CCCcEEEEeCCCC
Q psy9182         416 DNTIRLWDIECGACLR-VL-----EGHEELVRCIRF---DAKRIVSGA-YDGKIKVWNLVAA  467 (486)
Q Consensus       416 dg~v~iwd~~~~~~~~-~~-----~~h~~~v~~~~~---~~~~l~s~~-~dg~v~iwdl~~~  467 (486)
                      .+.|..|++.....+. ..     .........+++   +|++|++++ .++.|.+|+++..
T Consensus       281 ~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         281 QGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence            2337777775432221 11     122234556666   578776664 6789999998654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.89  E-value=0.0061  Score=53.04  Aligned_cols=213  Identities=8%  Similarity=0.049  Sum_probs=125.5

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC----CCcEEEEECCCCcEEEEe
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS----DSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~----dg~i~vwd~~~~~~~~~~  310 (486)
                      -.++.++|+++++-...+.|..|+..+++....+.........+++  +|+++++...    .+.+...+...+......
T Consensus        44 G~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~  123 (319)
T d2dg1a1          44 GLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII  123 (319)
T ss_dssp             EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred             eCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeec
Confidence            3456678887777778899999998877666665555556677777  6777666533    234566666655544433


Q ss_pred             cc--cCccEEEEEEcCC-eEEEEeCC-------CcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEE-EEeCCC
Q psy9182         311 IH--HCEAVLHLRFSNG-MMVTCSKD-------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIV-SASGDR  377 (486)
Q Consensus       311 ~~--~~~~i~~~~~~~~-~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~d~  377 (486)
                      ..  .......+.+.++ .++++...       +.+..++........    ....-...+.+.+  +++.|+ +-+..+
T Consensus       124 ~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~----~~~~~~~pnGia~s~dg~~lyvad~~~~  199 (319)
T d2dg1a1         124 EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP----IIQNISVANGIALSTDEKVLWVTETTAN  199 (319)
T ss_dssp             CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE----EEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred             cCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEE----EeeccceeeeeeeccccceEEEecccCC
Confidence            22  1234566777643 45544432       235545443332111    1111223445666  677654 445678


Q ss_pred             cEEEEECCCc-eEEEE-------EcCCcccEEEEEe--CCCEEEEEeCCCcEEEEECCCCeeeEEecC------cccCeE
Q psy9182         378 TIKVWNTSSC-EFVRT-------LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG------HEELVR  441 (486)
Q Consensus       378 ~i~iwd~~~~-~~~~~-------~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~------h~~~v~  441 (486)
                      .|..||+... .....       ........-.+++  +|++.++....+.|.+||. .|+.+..+..      +...++
T Consensus       200 ~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~  278 (319)
T d2dg1a1         200 RLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRST  278 (319)
T ss_dssp             EEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCC
T ss_pred             ceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceee
Confidence            9999987642 11111       1111122344555  4888888888999999995 5888887752      344678


Q ss_pred             EEEe--cCCEEEEEe
Q psy9182         442 CIRF--DAKRIVSGA  454 (486)
Q Consensus       442 ~~~~--~~~~l~s~~  454 (486)
                      +++|  +.+.+++..
T Consensus       279 ~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         279 HPQFIPGTNQLIICS  293 (319)
T ss_dssp             EEEECTTSCEEEEEE
T ss_pred             eEEEeCCCCEEEEEc
Confidence            9999  445555544

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=97.87  E-value=0.0078  Score=53.46  Aligned_cols=152  Identities=9%  Similarity=0.120  Sum_probs=86.4

Q ss_pred             cEEEEEe--cCCEEEEEeC-CCcEEEEECCC-CcEE--EEe--cccCccEEEEEEcCC--eE-EEEeCCCcEEEEECCCC
Q psy9182         276 SVLCLQY--DERVIISGSS-DSTVRVWDVNT-GEMV--NTL--IHHCEAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSP  344 (486)
Q Consensus       276 ~v~~~~~--~~~~l~~~~~-dg~i~vwd~~~-~~~~--~~~--~~~~~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~  344 (486)
                      .+.++.+  +++++++++. ...|.+|+... +...  ...  .........+.|+++  ++ ++...++.|.+|++...
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence            3567777  7888887764 35788887653 3322  121  223456788999876  44 55556889999998765


Q ss_pred             CceeeEE--eee--------------cCcccEEEE--EeCCCEEEEEeC------CCcEEEEECCCceEEEEE------c
Q psy9182         345 NEITLRR--VLV--------------GHRAAVNVV--DFDEKYIVSASG------DRTIKVWNTSSCEFVRTL------N  394 (486)
Q Consensus       345 ~~~~~~~--~~~--------------~~~~~v~~~--~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~------~  394 (486)
                      .......  ...              ........+  .++|++|+++..      .+.|..|++.....+...      .
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~  305 (365)
T d1jofa_         226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP  305 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred             CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEE
Confidence            4332111  110              111122333  448999888743      223777776543222111      1


Q ss_pred             CCcccEEEEEe---CCCEEEEE-eCCCcEEEEECCCC
Q psy9182         395 GHKRGIACLQY---RDRLVVSG-SSDNTIRLWDIECG  427 (486)
Q Consensus       395 ~~~~~v~~~~~---~~~~l~~~-~~dg~v~iwd~~~~  427 (486)
                      ........+.+   +|++|+++ ..++.|.+|++...
T Consensus       306 ~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence            12223334444   57877666 46799999987644

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=0.005  Score=51.82  Aligned_cols=203  Identities=11%  Similarity=0.066  Sum_probs=107.9

Q ss_pred             EEEEeCCCEEEEEecCC---eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-CCcEE--EEECCCCcEEEE
Q psy9182         238 YCLQYDDHKIVSGLRDN---TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS-DSTVR--VWDVNTGEMVNT  309 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-dg~i~--vwd~~~~~~~~~  309 (486)
                      -+++|||+.||......   .+.+.+...+..... ..+........|  +++.++.... ++...  .+..........
T Consensus        44 P~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~  122 (269)
T d2hqsa1          44 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV  122 (269)
T ss_dssp             EEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE-ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC
T ss_pred             eEECCCCCEEEEEEeeccCcceeeeecccCceeEE-eeeecccccceecCCCCeeeEeeecCCccceeecccccccceee
Confidence            46899999998765443   477777766665443 335556666666  7777766543 33322  333333333222


Q ss_pred             ecccCccEEEEEEc--CC-eEEEEeCCCc--EEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEeCCC---cE
Q psy9182         310 LIHHCEAVLHLRFS--NG-MMVTCSKDRS--IAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDR---TI  379 (486)
Q Consensus       310 ~~~~~~~i~~~~~~--~~-~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~---~i  379 (486)
                      . ..........+.  +. .+++...+|.  |...++......    .............+  +++.++..+.++   .+
T Consensus       123 ~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i  197 (269)
T d2hqsa1         123 T-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ----RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHI  197 (269)
T ss_dssp             C-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE----ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred             e-eccccccccccccccccceecccccCCceEeeeecccccce----eeecccccccccccccccceeEEEeecCCceee
Confidence            2 222333333333  23 4555555554  555555554332    22223334444444  778777665443   35


Q ss_pred             EEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeC---CCcEEEEECCCCeeeEEecCcccCeEEEEecC
Q psy9182         380 KVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS---DNTIRLWDIECGACLRVLEGHEELVRCIRFDA  447 (486)
Q Consensus       380 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~---dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~  447 (486)
                      .+.|...+...............++++|+.|+..+.   ...|+++++..+. ...+....+.+...+|.+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~-~~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         198 AKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             EEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-EEECCCSSSEEEEEEECC
T ss_pred             eEeecccccceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEEeCCCCcEEeEEeCC
Confidence            555655554322222222223345557888775553   3468899998655 455665666677777754

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.69  E-value=0.012  Score=50.42  Aligned_cols=202  Identities=12%  Similarity=0.047  Sum_probs=119.7

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCCcEEEEecc----cCccEE
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTGEMVNTLIH----HCEAVL  318 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----~~~~i~  318 (486)
                      +.+..+--..+.|..||..+++.. .+. ....+.++.+ ....++.++.+ .+..+|..+++.......    ....+.
T Consensus        30 ~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~n  106 (295)
T d2ghsa1          30 GTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSN  106 (295)
T ss_dssp             TEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred             CEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEEEeC-ccEEeecccceeeEEeeeecCCCcccce
Confidence            334444446788999998888654 232 2345667777 33344455665 489999998876543321    123456


Q ss_pred             EEEEcCC-eEEEEeC-----CCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEE-EEEeCCCcEEEEECCCc--
Q psy9182         319 HLRFSNG-MMVTCSK-----DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYI-VSASGDRTIKVWNTSSC--  387 (486)
Q Consensus       319 ~~~~~~~-~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~iwd~~~~--  387 (486)
                      .+.+.++ .+..++.     .+.-.+|.+..++.....   . .-.....+.+  +++.+ ++-+..+.|..+++...  
T Consensus       107 d~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~---~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~  182 (295)
T d2ghsa1         107 DGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLF---A-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG  182 (295)
T ss_dssp             EEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEE---E-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred             eeEECCCCCEEEEeccccccccceeEeeecCCcEEEEe---e-ccCCcceeeecCCCceEEEeecccceeeEeeeccccc
Confidence            6777643 4444432     234455665554322211   1 1222344555  56644 55556788988886431  


Q ss_pred             ----e--EEEEEcCCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe---cCCEEEEE
Q psy9182         388 ----E--FVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DAKRIVSG  453 (486)
Q Consensus       388 ----~--~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~s~  453 (486)
                          +  ....+.+..+..-.+..+  |++.++.-..+.|..||. .|+.+..+.-....+++++|   |.+.|+..
T Consensus       183 ~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         183 LPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             CBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             ccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence                1  112223344455666664  777777777889999995 58999888876678999999   54555433

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.67  E-value=0.0056  Score=58.11  Aligned_cols=227  Identities=14%  Similarity=0.095  Sum_probs=131.1

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCc---ccEE--E-EEecCCEEEEEeC------CCcEEEEECCCCcEEEEe
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT---GSVL--C-LQYDERVIISGSS------DSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~v~--~-~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~  310 (486)
                      .+..++.++.|+.+...|..+|+.+.......   ..+.  . -...+..+++++.      .|.|+.+|.++|+.+..+
T Consensus       127 ~~~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  206 (573)
T d1kb0a2         127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW  206 (573)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             ECCcEEEEecccceeeeccccccceecccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeee
Confidence            35567888899999999999999887664321   1111  1 0113445555543      467999999999998876


Q ss_pred             cccC-------------------------------ccE-EEEEEcC--CeEEEEeC-------------------CCcEE
Q psy9182         311 IHHC-------------------------------EAV-LHLRFSN--GMMVTCSK-------------------DRSIA  337 (486)
Q Consensus       311 ~~~~-------------------------------~~i-~~~~~~~--~~l~~~~~-------------------dg~i~  337 (486)
                      ....                               ..+ ...++++  +.++.+..                   ...|.
T Consensus       207 ~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svv  286 (573)
T d1kb0a2         207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV  286 (573)
T ss_dssp             ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             eeccccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEE
Confidence            3210                               011 1122332  23333221                   12455


Q ss_pred             EEECCCCCceeeEEeee--------cCcccEEEEEeCC---CEEEEEeCCCcEEEEECCCceEEEEEcCCccc-------
Q psy9182         338 VWDMVSPNEITLRRVLV--------GHRAAVNVVDFDE---KYIVSASGDRTIKVWNTSSCEFVRTLNGHKRG-------  399 (486)
Q Consensus       338 i~d~~~~~~~~~~~~~~--------~~~~~v~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------  399 (486)
                      ..|+++++..-..+...        .....+..+..++   ..++.++.+|.+.++|..+++.+...+.....       
T Consensus       287 Ald~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~  366 (573)
T d1kb0a2         287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK  366 (573)
T ss_dssp             EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred             EecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEecccccccccccccccccccccccc
Confidence            66776666443222111        0111222333344   36777889999999999999987654321100       


Q ss_pred             ------------------------------EEEEEeCCCEEEEEeC----------------------------------
Q psy9182         400 ------------------------------IACLQYRDRLVVSGSS----------------------------------  415 (486)
Q Consensus       400 ------------------------------v~~~~~~~~~l~~~~~----------------------------------  415 (486)
                                                    -.++..+..+++....                                  
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  446 (573)
T d1kb0a2         367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF  446 (573)
T ss_dssp             TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred             ccceeeeeeccccccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCcccccccccccccc
Confidence                                          0011112222222111                                  


Q ss_pred             ---------CCcEEEEECCCCeeeEEecCcccC-eEEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         416 ---------DNTIRLWDIECGACLRVLEGHEEL-VRCIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       416 ---------dg~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                               -|.+.-||+.+|+.+...+..... --.++-.+..+++|+.||.++.+|.+++..
T Consensus       447 ~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~  510 (573)
T d1kb0a2         447 NAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK  510 (573)
T ss_dssp             CSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ccCCCCCCCcccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcE
Confidence                     146888999999998877543221 123555888999999999999999998864

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.54  E-value=0.011  Score=49.96  Aligned_cols=233  Identities=13%  Similarity=0.019  Sum_probs=111.7

Q ss_pred             CCccC--cceEEEeecCceeeecccccccceeeecCcccceeEEEeecceeEecCCCCceeccCcceeecCC----CCC-
Q psy9182         111 LPNFD--EKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVSSS----HDD-  183 (486)
Q Consensus       111 ~~s~~--~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s~s----~dg-  183 (486)
                      ..+||  |+++|-.+ +|.|.+.|+.+++. +.|..+.+.+...+|+               +|++.|+...    .+. 
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~S---------------PDG~~iaf~~~~~~~~~~   67 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGST-RKIVSNLGVINNARFF---------------PDGRKIAIRVMRGSSLNT   67 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCE-EEEECSSSEEEEEEEC---------------TTSSEEEEEEEESTTCCE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCE-EEEecCCCcccCEEEC---------------CCCCEEEEEEeeCCCCCc
Confidence            34677  98888654 46788889988775 4566666677788887               5666666432    221 


Q ss_pred             -cceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC------CeE
Q psy9182         184 -TILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD------NTI  256 (486)
Q Consensus       184 -~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------g~i  256 (486)
                       .|.+.+...+..........                       .............++++++.++.....      ..+
T Consensus        68 ~~i~~~~~~~g~~~~lt~~~~-----------------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~  124 (281)
T d1k32a2          68 ADLYFYNGENGEIKRITYFSG-----------------------KSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCL  124 (281)
T ss_dssp             EEEEEEETTTTEEEECCCCCE-----------------------EEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEE
T ss_pred             eEEEEEEecCCceEEeeecCC-----------------------CccCccccccccccCCCCCEEEEEEccCCCccceee
Confidence             24444443333222111000                       000001122345577788887765332      234


Q ss_pred             EEEECCCceeeEEEcCCcccEEEEEecCCEE-EEEeCCC-----------cEEEEECCCCcEEEEecccCccEEEEEEcC
Q psy9182         257 KVWDRVSLQCIKVLTGHTGSVLCLQYDERVI-ISGSSDS-----------TVRVWDVNTGEMVNTLIHHCEAVLHLRFSN  324 (486)
Q Consensus       257 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~  324 (486)
                      ...+...+.......+..  ......++..+ +....+.           .............. ............+.+
T Consensus       125 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  201 (281)
T d1k32a2         125 YRVENDGINFVPLNLGPA--THILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKK-IVDMSTHVSSPVIVG  201 (281)
T ss_dssp             EEEEGGGTEEEECCSCSC--SEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEE-EECCSSCCEEEEEET
T ss_pred             eeecCCCceeEEecCCcc--ceeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceee-ccCCccccceeeeec
Confidence            445544444322211111  11112233222 2221111           11112222222222 222233334444555


Q ss_pred             CeEEEEe-C--CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEE
Q psy9182         325 GMMVTCS-K--DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFV  390 (486)
Q Consensus       325 ~~l~~~~-~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  390 (486)
                      +.++... .  ...|.++|+.+.+...   ........+..++.||+.|+.. .++.|+++|+.+++..
T Consensus       202 ~~~~~~~~~~~~~~l~~~d~~g~~~~~---lt~~~~~~~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         202 HRIYFITDIDGFGQIYSTDLDGKDLRK---HTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE  266 (281)
T ss_dssp             TEEEEEECTTSSCEEEEEETTSCSCEE---CCCCCSSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE
T ss_pred             cccceecccccccceEEEeCCCCceEE---eecCCCcccccCcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence            5444433 2  3357777877665432   1122334455677788877654 3578888898877643

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.50  E-value=0.019  Score=54.10  Aligned_cols=53  Identities=8%  Similarity=0.098  Sum_probs=39.4

Q ss_pred             CcEEEEECCCCeeeEEecCcccCe-EEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         417 NTIRLWDIECGACLRVLEGHEELV-RCIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       417 g~v~iwd~~~~~~~~~~~~h~~~v-~~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      |.|.-||+.+|+.+.......... -.++-.+..++.|+.||.++.+|..+++.
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~  491 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA  491 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcE
Confidence            568889999999887764322111 13445788888999999999999998864

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.48  E-value=0.046  Score=51.63  Aligned_cols=60  Identities=18%  Similarity=0.237  Sum_probs=47.6

Q ss_pred             CCcEEEEECCCceEEEEEcCCcccE-EEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecC
Q psy9182         376 DRTIKVWNTSSCEFVRTLNGHKRGI-ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEG  435 (486)
Q Consensus       376 d~~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  435 (486)
                      .|.|.-+|+.+++.+-+...+.... -.++..+.++++|+.||.++.+|.++|+.+..++-
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~  525 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT  525 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEEC
Confidence            4678999999999888776443222 13455788989999999999999999999998864

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.032  Score=46.51  Aligned_cols=209  Identities=11%  Similarity=0.057  Sum_probs=110.3

Q ss_pred             eEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeCCC---cEEEEECCCCcEEEEecccCccEEEEEEcCC--eE
Q psy9182         255 TIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSSDS---TVRVWDVNTGEMVNTLIHHCEAVLHLRFSNG--MM  327 (486)
Q Consensus       255 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~--~l  327 (486)
                      .|.|.|.......... .+...+..-+|  ||+.|+......   .+.+.+...+... .+..+........|+++  .+
T Consensus        20 ~l~i~d~dG~~~~~l~-~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i   97 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKL   97 (269)
T ss_dssp             EEEEEETTSCSCEEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEE
T ss_pred             EEEEEcCCCCCcEEEe-cCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCee
Confidence            5777786644444333 34556667666  899998765443   4777777766544 44455667778888865  44


Q ss_pred             EE-EeCCCcEEEEECCCCCceeeEEeeecCcccEE-EEEeCCCE-EEEEeCCC--cEEEEECCCceEEEEEcCCcccEEE
Q psy9182         328 VT-CSKDRSIAVWDMVSPNEITLRRVLVGHRAAVN-VVDFDEKY-IVSASGDR--TIKVWNTSSCEFVRTLNGHKRGIAC  402 (486)
Q Consensus       328 ~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~-l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~  402 (486)
                      +. ...++...++.......... ........... ....++.. +++...++  .|.+.++..+.. ..+.........
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~-~~~~~~~~~~~~  175 (269)
T d2hqsa1          98 AFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQD  175 (269)
T ss_dssp             EEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEE
T ss_pred             eEeeecCCccceeecccccccce-eeeeccccccccccccccccceecccccCCceEeeeecccccc-eeeecccccccc
Confidence            43 33344433333322221111 11111111111 22224444 44444444  455666665543 333334444444


Q ss_pred             EEe--CCCEEEEEeCC-Cc--EEEEECCCCeeeEEecCcccCeEEEEe--cCCEEEEEeC---CCcEEEEeCCCCCC
Q psy9182         403 LQY--RDRLVVSGSSD-NT--IRLWDIECGACLRVLEGHEELVRCIRF--DAKRIVSGAY---DGKIKVWNLVAALD  469 (486)
Q Consensus       403 ~~~--~~~~l~~~~~d-g~--v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~~~---dg~v~iwdl~~~~~  469 (486)
                      ..+  +++.++..+.+ +.  +.+.+...+..  ....+........|  ||++|+-.+.   ...|.+++++.+..
T Consensus       176 ~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~  250 (269)
T d2hqsa1         176 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK  250 (269)
T ss_dssp             EEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred             cccccccceeEEEeecCCceeeeEeecccccc--eEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence            444  57776665543 44  44445554433  33344555666777  9998875543   34688999987643

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.31  E-value=0.049  Score=48.26  Aligned_cols=152  Identities=11%  Similarity=0.066  Sum_probs=81.4

Q ss_pred             ccCcceEEEeecCc-----------eeeecccccccceee--e-cCcccceeEEEeecceeEecCCCCceeccCcceeec
Q psy9182         113 NFDEKYIVSASGDR-----------TIKVWNTSSCEFVRT--L-NGHKRGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS  178 (486)
Q Consensus       113 s~~~~~l~tg~~dg-----------~v~iWd~~~~~~~~~--l-~~h~~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s  178 (486)
                      ..+|+.++.|+.+.           .+.+||..+++....  . ..|.......++.               .++..++.
T Consensus        28 ~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~---------------~~g~i~v~   92 (387)
T d1k3ia3          28 PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMD---------------GNGQIVVT   92 (387)
T ss_dssp             TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEEC---------------TTSCEEEE
T ss_pred             eeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEe---------------cCCcEEEe
Confidence            35788888877431           367899988764321  1 1221111122221               45555666


Q ss_pred             CCCC-CcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecC----
Q psy9182         179 SSHD-DTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRD----  253 (486)
Q Consensus       179 ~s~d-g~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----  253 (486)
                      |+.+ ..+.+||..+..-.......                            ........+...|++.++.|+.+    
T Consensus        93 Gg~~~~~~~~yd~~~~~w~~~~~~~----------------------------~~r~~~~~~~~~dG~v~v~GG~~~~~~  144 (387)
T d1k3ia3          93 GGNDAKKTSLYDSSSDSWIPGPDMQ----------------------------VARGYQSSATMSDGRVFTIGGSWSGGV  144 (387)
T ss_dssp             CSSSTTCEEEEEGGGTEEEECCCCS----------------------------SCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred             ecCCCcceeEecCccCccccccccc----------------------------ccccccceeeecCCceeeecccccccc
Confidence            6544 57888997654332211110                            01112233445588888888753    


Q ss_pred             --CeEEEEECCCceeeEEEcC---------Cc------ccEEEEE-ecCCEEEEEeCCCcEEEEECCCCcEE
Q psy9182         254 --NTIKVWDRVSLQCIKVLTG---------HT------GSVLCLQ-YDERVIISGSSDSTVRVWDVNTGEMV  307 (486)
Q Consensus       254 --g~i~i~d~~~~~~~~~~~~---------~~------~~v~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~  307 (486)
                        ..+.+||..+.+-...-..         +.      .....+. .+++.+..+..++.+.++|..+....
T Consensus       145 ~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~  216 (387)
T d1k3ia3         145 FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK  216 (387)
T ss_dssp             CCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred             ccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEe
Confidence              3689999887653221110         00      0111122 26777777777777888888776543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.29  E-value=0.059  Score=50.94  Aligned_cols=149  Identities=13%  Similarity=0.098  Sum_probs=91.8

Q ss_pred             CCEEEEEecCCeEEEEECCCceeeEEEcCCc---c-cEEE-EEecCCEEEEEeC------CCcEEEEECCCCcEEEEecc
Q psy9182         244 DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHT---G-SVLC-LQYDERVIISGSS------DSTVRVWDVNTGEMVNTLIH  312 (486)
Q Consensus       244 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~-~v~~-~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~  312 (486)
                      +.+++.++.|+.|.-.|.++++.+..+....   . .++. -.+.+..++++..      .|.|+-+|+++|+.+.++..
T Consensus       121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t  200 (596)
T d1w6sa_         121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA  200 (596)
T ss_dssp             CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred             ceEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeec
Confidence            4578889999999999999999998875321   1 1111 1124555666653      48899999999999987632


Q ss_pred             cC-------------------------------------ccE-EEEEEc--CCeEEEEeCC----------------CcE
Q psy9182         313 HC-------------------------------------EAV-LHLRFS--NGMMVTCSKD----------------RSI  336 (486)
Q Consensus       313 ~~-------------------------------------~~i-~~~~~~--~~~l~~~~~d----------------g~i  336 (486)
                      ..                                     ..+ ..++++  .+.++.+..+                ..|
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~si  280 (596)
T d1w6sa_         201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI  280 (596)
T ss_dssp             SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred             cCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccc
Confidence            11                                     000 112232  3455555432                347


Q ss_pred             EEEECCCCCceeeEEeeecC-------cccEEEEE---eCCC---EEEEEeCCCcEEEEECCCceEEEEE
Q psy9182         337 AVWDMVSPNEITLRRVLVGH-------RAAVNVVD---FDEK---YIVSASGDRTIKVWNTSSCEFVRTL  393 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~-------~~~v~~~~---~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~  393 (486)
                      ...|+++++..-..+. ..|       ......+.   .+++   .++....+|.+.++|..+++++...
T Consensus       281 vAlD~~TG~~~W~~Q~-~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~  349 (596)
T d1w6sa_         281 FGRDADTGEAKFGYQK-TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN  349 (596)
T ss_dssp             EEEETTTCCEEEEEES-STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cccccccccccccccc-eeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeec
Confidence            7788888886543332 122       11122222   2443   6777889999999999999887543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.28  E-value=0.046  Score=47.18  Aligned_cols=99  Identities=11%  Similarity=0.057  Sum_probs=59.8

Q ss_pred             ccEEEEEEcCC--eE-EEEeCCCcEEEEECCCCCcee-eEE----eeecCcccEEEEEe--CCCEEEEEeCCCcEEEEEC
Q psy9182         315 EAVLHLRFSNG--MM-VTCSKDRSIAVWDMVSPNEIT-LRR----VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWNT  384 (486)
Q Consensus       315 ~~i~~~~~~~~--~l-~~~~~dg~i~i~d~~~~~~~~-~~~----~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~iwd~  384 (486)
                      .....++|+++  .| ++-+..+.|..||+....... ...    ...........+++  +|++.++....+.|.++|.
T Consensus       177 ~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p  256 (319)
T d2dg1a1         177 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  256 (319)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             ceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC
Confidence            34567888754  44 555668899999986542211 111    11111122344555  7888888888999999995


Q ss_pred             CCceEEEEEcC------CcccEEEEEeC--CCEEEEEe
Q psy9182         385 SSCEFVRTLNG------HKRGIACLQYR--DRLVVSGS  414 (486)
Q Consensus       385 ~~~~~~~~~~~------~~~~v~~~~~~--~~~l~~~~  414 (486)
                       .++.+..+..      +...++++.+.  ...+++.+
T Consensus       257 -~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         257 -RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             -TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred             -CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence             6888887753      23356677774  34444443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.23  E-value=0.042  Score=45.82  Aligned_cols=217  Identities=12%  Similarity=0.157  Sum_probs=138.6

Q ss_pred             EEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe-cCCEEEEEeCCCcEEEEECCCC-cEEEEecccC-
Q psy9182         238 YCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY-DERVIISGSSDSTVRVWDVNTG-EMVNTLIHHC-  314 (486)
Q Consensus       238 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~-  314 (486)
                      .-++|..+.+|.-+ ..++.+||+++.+.++.+.-. ..|.-..| +.+.|+..+. ..|+-|+++.. ++.+.+..|. 
T Consensus        68 AIMhP~~~IiALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~  144 (327)
T d1utca2          68 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSS  144 (327)
T ss_dssp             EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEESSSSEEEEECS-SEEEEEESSSSCCCEEEEECCGG
T ss_pred             hhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcC-CCcEEEEecCCCEEEEEcC-CceEEEcccCCCCchhhhhhccc
Confidence            33567777777665 568999999999999888744 46666777 7788877765 46999999542 4555554332 


Q ss_pred             ---ccEEEEEEcCC--eE-EEE--eC----CCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCC-----EEEEEe---
Q psy9182         315 ---EAVLHLRFSNG--MM-VTC--SK----DRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEK-----YIVSAS---  374 (486)
Q Consensus       315 ---~~i~~~~~~~~--~l-~~~--~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l~~~~---  374 (486)
                         ..|..-..+++  ++ ++|  ..    .|.+.+|..+...    .+.+.+|......+..+|+     .++.+.   
T Consensus       145 L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~  220 (327)
T d1utca2         145 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ  220 (327)
T ss_dssp             GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred             ccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc----CccccceeeeeEEEEcCCCCCCceEEEEEECCC
Confidence               34554444443  22 222  12    3678889876643    3667788777766666432     222222   


Q ss_pred             CCCcEEEEECCCce--------EEEEEc----CCcccEEEEEeC--CCEEEEEeCCCcEEEEECCCCeeeEEecCcccCe
Q psy9182         375 GDRTIKVWNTSSCE--------FVRTLN----GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV  440 (486)
Q Consensus       375 ~d~~i~iwd~~~~~--------~~~~~~----~~~~~v~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v  440 (486)
                      ..+++++-++....        ....+.    ....--.++..+  -..+..-+.-|.|++||++++.++..-+-..+.|
T Consensus       221 ~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~i  300 (327)
T d1utca2         221 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI  300 (327)
T ss_dssp             TEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             CCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCce
Confidence            23578888875421        111111    111223444444  4678888899999999999999998877777777


Q ss_pred             EEEEe--cCCEEEEEeCCCcEEE
Q psy9182         441 RCIRF--DAKRIVSGAYDGKIKV  461 (486)
Q Consensus       441 ~~~~~--~~~~l~s~~~dg~v~i  461 (486)
                      ..-+.  +..-++....+|.|.-
T Consensus       301 F~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         301 FVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             EEEEEETTTTEEEEEETTSEEEE
T ss_pred             EEeccCCCCceEEEECCCCeEEE
Confidence            75555  4456777778887754

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.19  E-value=0.048  Score=45.63  Aligned_cols=222  Identities=12%  Similarity=0.053  Sum_probs=110.7

Q ss_pred             EEEeC--CCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEe--cCCEEEEEeC-C-----CcEEEEECCCCcEEE
Q psy9182         239 CLQYD--DHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQY--DERVIISGSS-D-----STVRVWDVNTGEMVN  308 (486)
Q Consensus       239 ~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d-----g~i~vwd~~~~~~~~  308 (486)
                      .++|+  |+.++..+ +|.|.+.|+.+++..+ +..+.+.+....|  ||+.|+.... +     ..|.+++..+++...
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~-Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRK-IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEE-EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEE-EecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            35788  99887664 5689999999888654 4545566666666  8998876532 2     247788887776543


Q ss_pred             Eecc------cCccEEEEEEcCC--eEEEEeCC------CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEE-
Q psy9182         309 TLIH------HCEAVLHLRFSNG--MMVTCSKD------RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSA-  373 (486)
Q Consensus       309 ~~~~------~~~~i~~~~~~~~--~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-  373 (486)
                      ....      .........|+++  .++.....      ..+...+.......   .. ... ........++..++.. 
T Consensus        83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~~~~~  157 (281)
T d1k32a2          83 ITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV---PL-NLG-PATHILFADGRRVIGRN  157 (281)
T ss_dssp             CCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE---EC-CSC-SCSEEEEETTEEEEEES
T ss_pred             eeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeE---Ee-cCC-ccceeeecCCCeEEEee
Confidence            2211      1122344556543  44433221      12333333322111   10 011 1111112233222222 


Q ss_pred             eCCC-----------cEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEe-C--CCcEEEEECCCCeeeEEecCcccC
Q psy9182         374 SGDR-----------TIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGS-S--DNTIRLWDIECGACLRVLEGHEEL  439 (486)
Q Consensus       374 ~~d~-----------~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~--dg~v~iwd~~~~~~~~~~~~h~~~  439 (486)
                      ..+.           ................ ..........+.+..++... .  ...|.++|+.+++...........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~lt~~~~~~  236 (281)
T d1k32a2         158 TFELPHWKGYRGGTRGKIWIEVNSGAFKKIV-DMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYY  236 (281)
T ss_dssp             CSCCTTSTTCCSTTCCEEEEEEETTEEEEEE-CCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSC
T ss_pred             ccccceeeeeccCCcceeeeeccccceeecc-CCccccceeeeeccccceecccccccceEEEeCCCCceEEeecCCCcc
Confidence            1111           1111111222222222 22233334444444444443 3  345778888766544332333445


Q ss_pred             eEEEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         440 VRCIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       440 v~~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      +..++.||+.|+-. .+|.|+++|++++..
T Consensus       237 ~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~  265 (281)
T d1k32a2         237 PRHLNTDGRRILFS-KGGSIYIFNPDTEKI  265 (281)
T ss_dssp             EEEEEESSSCEEEE-ETTEEEEECTTTCCE
T ss_pred             cccCcCCCCEEEEE-eCCEEEEEECCCCCE
Confidence            66677799988764 478899999987753

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.11  Score=47.40  Aligned_cols=118  Identities=14%  Similarity=0.099  Sum_probs=66.9

Q ss_pred             ccCCccCcceEEEeecCceeeecccccccceeeecCcc---cceeEEEeecceeEecCCCCceeccCcceeec-------
Q psy9182         109 SLLPNFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHK---RGIACLQYRDRLVVSGSSDNTIRYRDEFQIVS-------  178 (486)
Q Consensus       109 ~~~~s~~~~~l~tg~~dg~v~iWd~~~~~~~~~l~~h~---~~V~~~~~~~~~~~~~~~d~~i~~~~~~~l~s-------  178 (486)
                      ...+.+++.++.. ..+|.|.+||+.+++....+..+.   ..+....++               +|+++++.       
T Consensus        21 ~~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~S---------------pD~~~vl~~~~~~~~   84 (465)
T d1xfda1          21 EAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEIS---------------PDREYALFSYNVEPI   84 (465)
T ss_dssp             CCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEEC---------------TTSSEEEEEESCCCC
T ss_pred             CCEEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEEC---------------CCCCeEEEEEcccce
Confidence            3456677776654 567899999999887644443322   234444454               23333322       


Q ss_pred             --CCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEecCCeE
Q psy9182         179 --SSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGLRDNTI  256 (486)
Q Consensus       179 --~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i  256 (486)
                        -+..+.+.++|+.++..........                           .........++|||+.+|... ++.|
T Consensus        85 ~r~s~~~~~~i~d~~~~~~~~l~~~~~---------------------------~~~~l~~~~wSPDG~~iafv~-~~nl  136 (465)
T d1xfda1          85 YQHSYTGYYVLSKIPHGDPQSLDPPEV---------------------------SNAKLQYAGWGPKGQQLIFIF-ENNI  136 (465)
T ss_dssp             SSSCCCSEEEEEESSSCCCEECCCTTC---------------------------CSCCCSBCCBCSSTTCEEEEE-TTEE
T ss_pred             eEeeccccEEEEEccCCceeeccCccC---------------------------CccccceeeeccCCceEEEEe-cceE
Confidence              2345677788876654433221110                           001112234688998887765 6678


Q ss_pred             EEEECCCceeeEEE
Q psy9182         257 KVWDRVSLQCIKVL  270 (486)
Q Consensus       257 ~i~d~~~~~~~~~~  270 (486)
                      .+.+..++..++..
T Consensus       137 ~~~~~~~~~~~~lt  150 (465)
T d1xfda1         137 YYCAHVGKQAIRVV  150 (465)
T ss_dssp             EEESSSSSCCEEEE
T ss_pred             EEEecCCCceEEEe
Confidence            88887776655544

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.92  E-value=0.095  Score=44.49  Aligned_cols=166  Identities=8%  Similarity=0.050  Sum_probs=101.3

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCC----cccEEEEEe--cCCEEEEEeC----CCcEEEEECCCCcE
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGH----TGSVLCLQY--DERVIISGSS----DSTVRVWDVNTGEM  306 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~----dg~i~vwd~~~~~~  306 (486)
                      ..++..++.+++ ++.+ .+..+|..+++........    ...+..+.+  +|++.++...    .+.-.+|.+..++.
T Consensus        63 ~i~~~~dg~l~v-a~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~  140 (295)
T d2ghsa1          63 ALAKISDSKQLI-ASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV  140 (295)
T ss_dssp             EEEEEETTEEEE-EETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE
T ss_pred             EEEEecCCCEEE-EEeC-ccEEeecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcE
Confidence            344555665554 4554 5889999988765443321    123555655  5665554332    23456666666655


Q ss_pred             EEEecccCccEEEEEEcCC---eEEEEeCCCcEEEEECCCCCce-----eeEEeeecCcccEEEEEe--CCCEEEEEeCC
Q psy9182         307 VNTLIHHCEAVLHLRFSNG---MMVTCSKDRSIAVWDMVSPNEI-----TLRRVLVGHRAAVNVVDF--DEKYIVSASGD  376 (486)
Q Consensus       307 ~~~~~~~~~~i~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d  376 (486)
                      ..... .-.....+.++++   ++++-+..+.|..|++......     .......+.......+.+  +|++.++.-..
T Consensus       141 ~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~  219 (295)
T d2ghsa1         141 TKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE  219 (295)
T ss_dssp             EEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred             EEEee-ccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCC
Confidence            44332 2334566777754   4556667889999987532211     111222233444556666  67777777778


Q ss_pred             CcEEEEECCCceEEEEEcCCcccEEEEEeC
Q psy9182         377 RTIKVWNTSSCEFVRTLNGHKRGIACLQYR  406 (486)
Q Consensus       377 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  406 (486)
                      +.|..||. .++.+..+.-....+++++|.
T Consensus       220 g~V~~~dp-~G~~~~~i~lP~~~~T~~~FG  248 (295)
T d2ghsa1         220 GAVDRYDT-DGNHIARYEVPGKQTTCPAFI  248 (295)
T ss_dssp             TEEEEECT-TCCEEEEEECSCSBEEEEEEE
T ss_pred             CceEEecC-CCcEeeEecCCCCceEEEEEe
Confidence            89999995 688888888777778999994

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.18  Score=45.88  Aligned_cols=108  Identities=6%  Similarity=-0.016  Sum_probs=65.1

Q ss_pred             eecCCCCCcceeeecccccccccCCCCCCCCCCCCcccccccccCceeEEEEeccCCCccceEEEEeCCCEEEEEe----
Q psy9182         176 IVSSSHDDTILIWDFLNYSETPIQGGGGGGPPPSGPSIENNWRMGKFLLQRINCRSENSKGVYCLQYDDHKIVSGL----  251 (486)
Q Consensus       176 l~s~s~dg~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~----  251 (486)
                      ++.-..+|.+.+||+.+..........                          ...........++||+++++...    
T Consensus        30 ~~~~~~~g~i~~~~~~~~~~~~l~~~~--------------------------~~~~~~~~~~~~SpD~~~vl~~~~~~~   83 (465)
T d1xfda1          30 FIYREQKGTVRLWNVETNTSTVLIEGK--------------------------KIESLRAIRYEISPDREYALFSYNVEP   83 (465)
T ss_dssp             BCCCCSSSCEEEBCGGGCCCEEEECTT--------------------------TTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred             EEEEeCCCcEEEEECCCCCEEEEEcCc--------------------------cccccccceeEECCCCCeEEEEEcccc
Confidence            344456788999998765433211110                          01112334566889999887764    


Q ss_pred             -----cCCeEEEEECCCceeeEEEcC--CcccEEE--EEecCCEEEEEeCCCcEEEEECCCCcEEEEe
Q psy9182         252 -----RDNTIKVWDRVSLQCIKVLTG--HTGSVLC--LQYDERVIISGSSDSTVRVWDVNTGEMVNTL  310 (486)
Q Consensus       252 -----~dg~i~i~d~~~~~~~~~~~~--~~~~v~~--~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~  310 (486)
                           ..+.+.++|+.+++.......  ....+..  .++||+.++-.. ++.|.+.+..++..++..
T Consensus        84 ~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt  150 (465)
T d1xfda1          84 IYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVV  150 (465)
T ss_dssp             CSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEE
T ss_pred             eeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEe
Confidence                 357889999998875443222  2223322  344888887765 567888888777655444

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=96.45  E-value=0.19  Score=41.89  Aligned_cols=219  Identities=12%  Similarity=0.068  Sum_probs=112.5

Q ss_pred             eEEEEeCCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCcc
Q psy9182         237 VYCLQYDDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEA  316 (486)
Q Consensus       237 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~  316 (486)
                      +..++-...+.++-. ||.|..|-....-.+-.-......+..++......+.- .||.+..|.....-....-......
T Consensus        28 i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~~~~~al-~dg~v~~wG~~~~gq~~~~~~~~~~  105 (273)
T d1jtdb_          28 VDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-KDGEVIAWGGNEDGQTTVPAEARSG  105 (273)
T ss_dssp             EEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECSSEEEEE-ETTEEEEEECCTTSTTCCCGGGGSS
T ss_pred             cEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCCCceeee-eeeeeeccCCCcceeeccccccccc
Confidence            455555555555444 89999996544322211112234456666644433333 4899999976432111111111233


Q ss_pred             EEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCC
Q psy9182         317 VLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGH  396 (486)
Q Consensus       317 i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~  396 (486)
                      +..+.......+.. .|+.+..|.-.......   ........+..+.-....++.. .++.++.|..............
T Consensus       106 ~~~i~~~~~~~~~~-~dg~v~~~g~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~-~~g~~~~~G~~~~g~~~~~~~~  180 (273)
T d1jtdb_         106 VDAIAAGAWASYAL-KDGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYTALAV-KNGGVIAWGDNYFGQTTVPAEA  180 (273)
T ss_dssp             CCEEEEETTEEEEE-ETTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTSCCGGG
T ss_pred             eeEEeeeccccccc-ccccceecccCCCCcee---eeccCCceEEEEeccceeeeee-cccceeEeecccCCcccccccc
Confidence            44455444444433 48889998754332211   1111223444444444444433 4678888875543222222223


Q ss_pred             cccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEecCcccCeEEEEe-cCCEEEEEeCCCcEEEEeCC
Q psy9182         397 KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DAKRIVSGAYDGKIKVWNLV  465 (486)
Q Consensus       397 ~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~s~~~dg~v~iwdl~  465 (486)
                      ...|..++......+.-. ||.|+.|=....-.+..-......|..|+- +...++.  .||.|..|--.
T Consensus       181 ~~~v~~Is~G~~h~~~l~-dG~v~~WG~n~~Gql~~~~~~~~~v~~I~~G~~~~~~l--~~g~v~~WG~~  247 (273)
T d1jtdb_         181 QSGVDDVAGGIFHSLALK-DGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLAL--KNGKVIAWGSS  247 (273)
T ss_dssp             SSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEE--ETTEEEEESTT
T ss_pred             cCCccceeccceeeEEEe-cCcEEEcCCCCCCccCCCccCCCCcEEEEeCcceEEEE--ECCEEEEECCC
Confidence            456777877655544444 899999965332112111222345777877 4444444  38999999644

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.18  E-value=0.52  Score=44.11  Aligned_cols=53  Identities=17%  Similarity=0.249  Sum_probs=40.4

Q ss_pred             CcEEEEECCCCeeeEEecCcccCeE-EEEecCCEEEEEeCCCcEEEEeCCCCCC
Q psy9182         417 NTIRLWDIECGACLRVLEGHEELVR-CIRFDAKRIVSGAYDGKIKVWNLVAALD  469 (486)
Q Consensus       417 g~v~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~l~s~~~dg~v~iwdl~~~~~  469 (486)
                      |.|.-+|+.+|+.+.....+..... .++-.+..+++|+.||.++.+|.++++.
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~  519 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE  519 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcE
Confidence            6788899999998887764432221 2445788888999999999999998864

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.86  E-value=0.39  Score=39.90  Aligned_cols=207  Identities=9%  Similarity=0.178  Sum_probs=122.6

Q ss_pred             CeEEEEECCCcee-eEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEc-CCeEEEEe
Q psy9182         254 NTIKVWDRVSLQC-IKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS-NGMMVTCS  331 (486)
Q Consensus       254 g~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~  331 (486)
                      ..|.|.|+.+... .+.--.-.+.|  +.+..+.++.-+ ..++.++|+++.+.++.+.... .|.-..|- ++.|+.. 
T Consensus        45 ~~VvIidl~n~~~~~Rrpi~AdsAI--MhP~~~IiALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~lV-  119 (327)
T d1utca2          45 AQVVIIDMNDPSNPIRRPISADSAI--MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-  119 (327)
T ss_dssp             EEEEEEETTSTTSCEEEECCCSEEE--ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEESSSSEEEEE-
T ss_pred             ceEEEEECCCCCcceecccchhhhh--cCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCC-CcEEEEecCCCEEEEE-
Confidence            4788899876543 32221112211  234555555544 5689999999999998887754 56666775 4455544 


Q ss_pred             CCCcEEEEECCCCCceeeEEeeecCc----ccEEEEEe--CCCEEEEEe-------CCCcEEEEECCCceEEEEEcCCcc
Q psy9182         332 KDRSIAVWDMVSPNEITLRRVLVGHR----AAVNVVDF--DEKYIVSAS-------GDRTIKVWNTSSCEFVRTLNGHKR  398 (486)
Q Consensus       332 ~dg~i~i~d~~~~~~~~~~~~~~~~~----~~v~~~~~--~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~  398 (486)
                      .+..|+-|+++.....  .+.+..|.    ..|.....  +.++++..+       -.|.+.+|..+. +.-+.+++|..
T Consensus       120 T~taVYHW~~~g~s~P--~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er-~~sQ~ieGhaa  196 (327)
T d1utca2         120 TDNAVYHWSMEGESQP--VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA  196 (327)
T ss_dssp             CSSEEEEEESSSSCCC--EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEE
T ss_pred             cCCceEEEcccCCCCc--hhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEecc-CcCccccceee
Confidence            4668999999654432  23333332    34444433  566665543       236788999875 44677888877


Q ss_pred             cEEEEEeCCC-----EEEEEe---CCCcEEEEECCCCe---e-----eEEec----CcccCeEEEEec--CCEEEEEeCC
Q psy9182         399 GIACLQYRDR-----LVVSGS---SDNTIRLWDIECGA---C-----LRVLE----GHEELVRCIRFD--AKRIVSGAYD  456 (486)
Q Consensus       399 ~v~~~~~~~~-----~l~~~~---~dg~v~iwd~~~~~---~-----~~~~~----~h~~~v~~~~~~--~~~l~s~~~d  456 (486)
                      .-..+..+|+     +++.+.   ..+.++|-++....   .     ...+.    ...+-..++...  -..+..-+.-
T Consensus       197 ~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~  276 (327)
T d1utca2         197 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY  276 (327)
T ss_dssp             EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETT
T ss_pred             eeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecC
Confidence            6666655432     232222   23678888885421   1     11111    112334455553  3457778899


Q ss_pred             CcEEEEeCCCCC
Q psy9182         457 GKIKVWNLVAAL  468 (486)
Q Consensus       457 g~v~iwdl~~~~  468 (486)
                      |.|++||+.++.
T Consensus       277 G~i~lyDleTgt  288 (327)
T d1utca2         277 GYIHLYDLETGT  288 (327)
T ss_dssp             SEEEEEETTTCC
T ss_pred             cEEEEEEccccc
Confidence            999999999764

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=95.76  E-value=0.34  Score=40.31  Aligned_cols=187  Identities=13%  Similarity=0.082  Sum_probs=98.2

Q ss_pred             cccEEEEEecCCEEEEEeCCCcEEEEECCCCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEee
Q psy9182         274 TGSVLCLQYDERVIISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVL  353 (486)
Q Consensus       274 ~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  353 (486)
                      ...|..++....+.++-. ||.|..|-....-.+..-......+..+..-....++- .|+.+..|..........   .
T Consensus        25 ~~~i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~~~~~al-~dg~v~~wG~~~~gq~~~---~   99 (273)
T d1jtdb_          25 QSGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-KDGEVIAWGGNEDGQTTV---P   99 (273)
T ss_dssp             SSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECSSEEEEE-ETTEEEEEECCTTSTTCC---C
T ss_pred             CCCcEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCCCceeee-eeeeeeccCCCcceeecc---c
Confidence            346788888555555545 89999997654322211122234455665544443333 489999998644322111   1


Q ss_pred             ecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCceEEEEEcCCcccEEEEEeCCCEEEEEeCCCcEEEEECCCCeeeEEe
Q psy9182         354 VGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL  433 (486)
Q Consensus       354 ~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  433 (486)
                      ......+..+.......+.. .|+.+..|.................+..+.-....++. ..++.++.|-..........
T Consensus       100 ~~~~~~~~~i~~~~~~~~~~-~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~g~~~~~G~~~~g~~~~~  177 (273)
T d1jtdb_         100 AEARSGVDAIAAGAWASYAL-KDGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA-VKNGGVIAWGDNYFGQTTVP  177 (273)
T ss_dssp             GGGGSSCCEEEEETTEEEEE-ETTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE-EETTEEEEEECCTTSTTSCC
T ss_pred             cccccceeEEeeeccccccc-ccccceecccCCCCceeeeccCCceEEEEeccceeeee-ecccceeEeecccCCccccc
Confidence            11122333444433433333 47889988754322211111222345555444444443 34788888876543332222


Q ss_pred             cCcccCeEEEEecCCEEEEEeCCCcEEEEeCCCCC
Q psy9182         434 EGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVAAL  468 (486)
Q Consensus       434 ~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~~~  468 (486)
                      ......|..|+......+.-. ||.|+-|=-....
T Consensus       178 ~~~~~~v~~Is~G~~h~~~l~-dG~v~~WG~n~~G  211 (273)
T d1jtdb_         178 AEAQSGVDDVAGGIFHSLALK-DGKVIAWGDNRYK  211 (273)
T ss_dssp             GGGSSSEEEEEECSSEEEEEE-TTEEEEEECCTTS
T ss_pred             ccccCCccceeccceeeEEEe-cCcEEEcCCCCCC
Confidence            234557888888444433334 8999999755443

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.00  E-value=0.75  Score=37.81  Aligned_cols=191  Identities=11%  Similarity=0.048  Sum_probs=113.1

Q ss_pred             EEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEE-EEeCCCcEEEEECCCCcEEEEecccCc
Q psy9182         240 LQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVII-SGSSDSTVRVWDVNTGEMVNTLIHHCE  315 (486)
Q Consensus       240 ~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~  315 (486)
                      +.+..+.++.. ..++.|+..++........+......+.++++|  +..|. +-...+.|.+.++........+.....
T Consensus        43 ~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~  122 (263)
T d1npea_          43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV  122 (263)
T ss_dssp             EETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred             EEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEeccccc
Confidence            34445555554 456778888887665555554433456666663  55555 445567899999876554333333345


Q ss_pred             cEEEEEEcC--CeEEEEeCC-C--cEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEE-eCCCcEEEEECCCc
Q psy9182         316 AVLHLRFSN--GMMVTCSKD-R--SIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSA-SGDRTIKVWNTSSC  387 (486)
Q Consensus       316 ~i~~~~~~~--~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~iwd~~~~  387 (486)
                      ....++.++  ++++..... +  .|.-.++.......   .....-.....+++  .++.|+.+ ...+.|...|+...
T Consensus       123 ~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~---i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~  199 (263)
T d1npea_         123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI---LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP  199 (263)
T ss_dssp             SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE---EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred             CCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCcee---eeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCC
Confidence            677888865  345443322 2  35445565443322   11222234456666  45556544 46778999998765


Q ss_pred             eEEEEEcCCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCCeeeEEec
Q psy9182         388 EFVRTLNGHKRGIACLQYRDRLVVSGS-SDNTIRLWDIECGACLRVLE  434 (486)
Q Consensus       388 ~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~  434 (486)
                      .....+.+... ...++..+..|.... ..+.|...|..+++.+..+.
T Consensus       200 ~~~~v~~~~~~-P~~lav~~~~lYwtd~~~~~I~~~~~~~g~~~~~~~  246 (263)
T d1npea_         200 GRRKVLEGLQY-PFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH  246 (263)
T ss_dssp             EEEEEEECCCS-EEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred             CeEEEECCCCC-cEEEEEECCEEEEEECCCCEEEEEECCCCccceEEC
Confidence            54444444332 356777666655544 67889999999898877664

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.41  E-value=1.1  Score=36.86  Aligned_cols=192  Identities=10%  Similarity=0.037  Sum_probs=111.1

Q ss_pred             CcccEEEEEec--CCEEEEE-eCCCcEEEEECCCCcEEEEecccCccEEEEEEc--CCeEE-EEeCCCcEEEEECCCCCc
Q psy9182         273 HTGSVLCLQYD--ERVIISG-SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFS--NGMMV-TCSKDRSIAVWDMVSPNE  346 (486)
Q Consensus       273 ~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~i~~~~~~--~~~l~-~~~~dg~i~i~d~~~~~~  346 (486)
                      +...+.++++|  .+.++.+ ..++.|+..++........+......+..++++  .+.++ +-...+.|.+.++.....
T Consensus        34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~  113 (263)
T d1npea_          34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR  113 (263)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceE
Confidence            33456677773  4555544 456778888887665554454444567777775  55555 445677999999876543


Q ss_pred             eeeEEeeecCcccEEEEEe--CCCEEEEEe-CCC--cEEEEECCCceEEEEEcCCcccEEEEEeC--CCEE-EEEeCCCc
Q psy9182         347 ITLRRVLVGHRAAVNVVDF--DEKYIVSAS-GDR--TIKVWNTSSCEFVRTLNGHKRGIACLQYR--DRLV-VSGSSDNT  418 (486)
Q Consensus       347 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~-~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~  418 (486)
                      ..   ...........+..  ...+++-.. ..+  .|.--++............-.....++++  ++.| ++-...+.
T Consensus       114 ~~---l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~  190 (263)
T d1npea_         114 RV---LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR  190 (263)
T ss_dssp             EE---EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             EE---EecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCE
Confidence            22   12222234555555  344444433 222  34444555433333333333455677775  5555 44456788


Q ss_pred             EEEEECCCCeeeEEecCcccCeEEEEecCCEEEEEe-CCCcEEEEeCCCCC
Q psy9182         419 IRLWDIECGACLRVLEGHEELVRCIRFDAKRIVSGA-YDGKIKVWNLVAAL  468 (486)
Q Consensus       419 v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~-~dg~v~iwdl~~~~  468 (486)
                      |...++........+.+-. ...+|++++++|.-.. ..+.|...|..++.
T Consensus       191 I~~~~~~g~~~~~v~~~~~-~P~~lav~~~~lYwtd~~~~~I~~~~~~~g~  240 (263)
T d1npea_         191 AECLNPAQPGRRKVLEGLQ-YPFAVTSYGKNLYYTDWKTNSVIAMDLAISK  240 (263)
T ss_dssp             EEEEETTEEEEEEEEECCC-SEEEEEEETTEEEEEETTTTEEEEEETTTTE
T ss_pred             EEEEECCCCCeEEEECCCC-CcEEEEEECCEEEEEECCCCEEEEEECCCCc
Confidence            9999997544444444433 3468888677766554 56788888887654

>d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: Regulator of chromosome condensation RCC1
domain: Regulator of chromosome condensation RCC1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.93  E-value=1.8  Score=37.74  Aligned_cols=232  Identities=10%  Similarity=0.064  Sum_probs=137.0

Q ss_pred             cceEEEEeCCCEEEEEecCCeEEEEECCC-ce-----------eeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182         235 KGVYCLQYDDHKIVSGLRDNTIKVWDRVS-LQ-----------CIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       235 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-~~-----------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~  302 (486)
                      ..|..++......++-..+|.|+.|-... ++           .+.........+..++......+.-..+|.|..|-..
T Consensus        47 ~~i~~ia~G~~h~~al~~~G~vy~wG~n~~GQLG~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~  126 (401)
T d1a12a_          47 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSF  126 (401)
T ss_dssp             SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECE
T ss_pred             CCeEEEEeCCCEEEEEeCCCEEEEEeCCCCCCCCcccccccccccccccccccceeeecccccceeeccccccceecccc
Confidence            34677777777778888999999995322 11           1111112334567777766777778889999999642


Q ss_pred             CC-------------cEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCcee--------------------e
Q psy9182         303 TG-------------EMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEIT--------------------L  349 (486)
Q Consensus       303 ~~-------------~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--------------------~  349 (486)
                      ..             ............+..++......+....++.+..|-......+.                    .
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p  206 (401)
T d1a12a_         127 RDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP  206 (401)
T ss_dssp             EETTEEEESSBBTBCEEEEEEECCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSC
T ss_pred             ccccccccccCCccccceeeeeccCCceeEEEecccceeeeecCCcccccccCCccccCCCCccccccCCcccccccccc
Confidence            11             11112223345677777767777778889999999754321100                    0


Q ss_pred             EEe-----eecCcccEEEEEeCCCEEEEEeCCCcEEEEECCCc----------eEEEE----EcCCcccEEEEEeCCCEE
Q psy9182         350 RRV-----LVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSC----------EFVRT----LNGHKRGIACLQYRDRLV  410 (486)
Q Consensus       350 ~~~-----~~~~~~~v~~~~~~~~~l~~~~~d~~i~iwd~~~~----------~~~~~----~~~~~~~v~~~~~~~~~l  410 (486)
                      ...     .......+..+.......+.-..++.+..|.....          .....    +......+..+.......
T Consensus       207 ~~~~~~~~~~~~~~~i~~v~~g~~~~~~l~~~g~v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~  286 (401)
T d1a12a_         207 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHT  286 (401)
T ss_dssp             EECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEE
T ss_pred             ceeeccccCCCCCceEEEEEecCCeEEEEecCCeEeeecccceecccccccccceeccccccccccceeEEEEeeeccce
Confidence            000     00112345566665666666778899999975321          11111    112223456666666777


Q ss_pred             EEEeCCCcEEEEECCC-----------CeeeEEecCcccCeEEEEecCCEEEEEeCCCcEEEEeCCC
Q psy9182         411 VSGSSDNTIRLWDIEC-----------GACLRVLEGHEELVRCIRFDAKRIVSGAYDGKIKVWNLVA  466 (486)
Q Consensus       411 ~~~~~dg~v~iwd~~~-----------~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~v~iwdl~~  466 (486)
                      ++-..+|.|+.|.-..           .......-.....|..|+.-...-++...||.|..|=-..
T Consensus       287 ~~l~~~g~v~~wG~n~~gqlG~g~~~~~~~~P~~i~~~~~i~~Is~G~~hs~alt~dG~v~~WG~n~  353 (401)
T d1a12a_         287 VCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGT  353 (401)
T ss_dssp             EEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred             eeeccCCCEEEecccccCccCCCcccccccCCEEcCCCCCeEEEEeeCCEEEEEeCCCeEEEEecCC
Confidence            7888899999996432           1222222223346888888555555568899999996443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=93.49  E-value=2.2  Score=37.30  Aligned_cols=182  Identities=13%  Similarity=0.113  Sum_probs=101.2

Q ss_pred             eCCCEEEEEe-cCCeEEEEECCCceeeEEEcC-CcccEEEEEe----cCCEEEEEeCCC------------------cEE
Q psy9182         242 YDDHKIVSGL-RDNTIKVWDRVSLQCIKVLTG-HTGSVLCLQY----DERVIISGSSDS------------------TVR  297 (486)
Q Consensus       242 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~----~~~~l~~~~~dg------------------~i~  297 (486)
                      +||+++++.. .++.|.+.|+.+.++.+.+.. ....+..+..    +-.+++.++.+.                  .+.
T Consensus        97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            3788877765 677999999999998775543 2334555544    345777766532                  366


Q ss_pred             EEECCCCcEEEEecccCccEEEEEE--cCCeEEEEeCC--------------------------------------CcEE
Q psy9182         298 VWDVNTGEMVNTLIHHCEAVLHLRF--SNGMMVTCSKD--------------------------------------RSIA  337 (486)
Q Consensus       298 vwd~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d--------------------------------------g~i~  337 (486)
                      ++|..+.+....+.... ....+.+  +++++++.+.+                                      +.+.
T Consensus       177 ~ID~~tm~V~~QV~V~g-~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~  255 (459)
T d1fwxa2         177 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK  255 (459)
T ss_dssp             EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred             EEecCCceEEEEeeeCC-ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence            78998888776664422 2223333  34466555432                                      1233


Q ss_pred             EEECCCCCce-eeEEeeecCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCceEE------------EEEcCCcccEEEE
Q psy9182         338 VWDMVSPNEI-TLRRVLVGHRAAVNVVDFDEKYIVSAS-GDRTIKVWNTSSCEFV------------RTLNGHKRGIACL  403 (486)
Q Consensus       338 i~d~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~------------~~~~~~~~~v~~~  403 (486)
                      +.|.+..... .......+....-..+++||+++++++ .+.++.++|+++....            .+.+ ..-.-..-
T Consensus       256 VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e-lglgPLht  334 (459)
T d1fwxa2         256 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT  334 (459)
T ss_dssp             EEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB-CCSCEEEE
T ss_pred             eecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecc-cCcCcccc
Confidence            3343321110 011111111111224555899887766 5889999998642111            1111 11223344


Q ss_pred             EeC--CCEEEEEeCCCcEEEEECC
Q psy9182         404 QYR--DRLVVSGSSDNTIRLWDIE  425 (486)
Q Consensus       404 ~~~--~~~l~~~~~dg~v~iwd~~  425 (486)
                      +|+  |+...+-.-|..|.-|++.
T Consensus       335 ~fd~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         335 AFDGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             EECTTSEEEEEETTTTEEEEEEHH
T ss_pred             ccCCCceEEEEeeccceEEEEecc
Confidence            555  4444455589999999984

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.33  E-value=2.2  Score=36.87  Aligned_cols=138  Identities=12%  Similarity=0.120  Sum_probs=91.1

Q ss_pred             ccceEEEEeCCCEEEEEecCCeEEEEECCC-----------ceeeEEEcCCcccEEEEEecCCEEEEEeCCCcEEEEECC
Q psy9182         234 SKGVYCLQYDDHKIVSGLRDNTIKVWDRVS-----------LQCIKVLTGHTGSVLCLQYDERVIISGSSDSTVRVWDVN  302 (486)
Q Consensus       234 ~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~-----------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~  302 (486)
                      ....++++....++++|+.++ +.|..+..           ........  -..|..++++++.+++.. ++.+..++..
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d~l~v~~-~~~l~~~~~~  113 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGDQVLVST-RNALYSLDLE  113 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETTEEEEEE-SSEEEEEESS
T ss_pred             ccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCCEEEEEe-CCCEEEEEee
Confidence            345677787788888888775 56665211           11111111  125788888888777764 4568888887


Q ss_pred             CCcEEEEecccCccEEEEEEcCCeEEEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCCcEEEE
Q psy9182         303 TGEMVNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVW  382 (486)
Q Consensus       303 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~iw  382 (486)
                      .-...........++..+.+.+..++....++.+.++++..++....       ...+.++.+.++..+.+-.++..+++
T Consensus       114 ~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~-------~~~v~~~~~~~~~~~v~ws~kgkq~v  186 (381)
T d1xipa_         114 ELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQL-------AQNVTSFDVTNSQLAVLLKDRSFQSF  186 (381)
T ss_dssp             STTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE-------EESEEEEEECSSEEEEEETTSCEEEE
T ss_pred             ccccccccccccccccceecCCceeEEEecCCCEEEEEeccCccccc-------cCCcceEEecCCceEEEEeCCcEEEE
Confidence            65555444445667889999999999999999999999988754321       12455666666666666666665554

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=93.06  E-value=0.61  Score=40.71  Aligned_cols=133  Identities=16%  Similarity=0.180  Sum_probs=71.0

Q ss_pred             EEEEECCCCcEEE--Ee-cccCccEEEEEEc-C-CeEEEEeCC-CcEEEEECCCCCceeeEEeeecCcccEEEEEe-CCC
Q psy9182         296 VRVWDVNTGEMVN--TL-IHHCEAVLHLRFS-N-GMMVTCSKD-RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF-DEK  368 (486)
Q Consensus       296 i~vwd~~~~~~~~--~~-~~~~~~i~~~~~~-~-~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~-~~~  368 (486)
                      +.+||..+++...  .. ..+........+. + ..++.|+.+ ..+.+||..+..-.. ............+... |++
T Consensus        54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~-~~~~~~~r~~~~~~~~~dG~  132 (387)
T d1k3ia3          54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIP-GPDMQVARGYQSSATMSDGR  132 (387)
T ss_dssp             EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEE-CCCCSSCCSSCEEEECTTSC
T ss_pred             EEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccc-cccccccccccceeeecCCc
Confidence            6789998775422  11 1121112222332 3 355555443 589999988754321 1111122222233333 888


Q ss_pred             EEEEEeCC------CcEEEEECCCceEEEEEcC---------Cc-------ccEEEEEeCCCEEEEEeCCCcEEEEECCC
Q psy9182         369 YIVSASGD------RTIKVWNTSSCEFVRTLNG---------HK-------RGIACLQYRDRLVVSGSSDNTIRLWDIEC  426 (486)
Q Consensus       369 ~l~~~~~d------~~i~iwd~~~~~~~~~~~~---------~~-------~~v~~~~~~~~~l~~~~~dg~v~iwd~~~  426 (486)
                      +++.++.+      ..+.+||..+.+-...-..         +.       ........+++.+..+..++.+.+++..+
T Consensus       133 v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~  212 (387)
T d1k3ia3         133 VFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS  212 (387)
T ss_dssp             EEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred             eeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCccc
Confidence            88888743      3689999988654321110         00       11112223577777787788888888877


Q ss_pred             Cee
Q psy9182         427 GAC  429 (486)
Q Consensus       427 ~~~  429 (486)
                      ...
T Consensus       213 ~~~  215 (387)
T d1k3ia3         213 GDV  215 (387)
T ss_dssp             CEE
T ss_pred             CcE
Confidence            654

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.99  E-value=3.4  Score=33.74  Aligned_cols=212  Identities=10%  Similarity=0.105  Sum_probs=103.5

Q ss_pred             eEEEEECCCceeeE--EEcCCcccEEEEEecCCEEEEEeC---------CCcEEEEECCCCcEEEEec--ccCccEEEEE
Q psy9182         255 TIKVWDRVSLQCIK--VLTGHTGSVLCLQYDERVIISGSS---------DSTVRVWDVNTGEMVNTLI--HHCEAVLHLR  321 (486)
Q Consensus       255 ~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~--~~~~~i~~~~  321 (486)
                      .+.+||..+++-..  .+......-..+..++..++.|+.         -..+.+||..+.+....-.  .......+..
T Consensus        20 ~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~~~   99 (288)
T d1zgka1          20 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV   99 (288)
T ss_dssp             CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE
T ss_pred             eEEEEECCCCeEEECCCCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceeccc
Confidence            57899988865332  222222222333446666666653         1357788987765443211  1111122333


Q ss_pred             EcCCeEEEEeCCCc-----EEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCceEEE
Q psy9182         322 FSNGMMVTCSKDRS-----IAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD-----RTIKVWNTSSCEFVR  391 (486)
Q Consensus       322 ~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~  391 (486)
                      ..+..++.++.++.     ...+|..+..... ................++..++.|+.+     ..+..||..+.+...
T Consensus       100 ~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~~~~~~~~~d~~~~~~~~  178 (288)
T d1zgka1         100 IDGHIYAVGGSHGCIHHNSVERYEPERDEWHL-VAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM  178 (288)
T ss_dssp             ETTEEEEECCEETTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             cceeeEEecceecccccceeeeeccccCcccc-ccccccccccceeeeeeecceEecCcccccccceEEEeecccccccc
Confidence            34444444443333     4446655542211 111111122222333455566655543     457888887765332


Q ss_pred             EEc--CCcccEEEEEeCCCEEEEEeCC-----CcEEEEECCCCeeeEEecCc--ccCeEEEEecCCEEEEEeCCCc----
Q psy9182         392 TLN--GHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRVLEGH--EELVRCIRFDAKRIVSGAYDGK----  458 (486)
Q Consensus       392 ~~~--~~~~~v~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~l~s~~~dg~----  458 (486)
                      .-.  ...........++.+++.|+.+     .....+|..+.+....-...  .....++..+++.++.|+.++.    
T Consensus       179 ~~~~~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~  258 (288)
T d1zgka1         179 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLD  258 (288)
T ss_dssp             CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCC
T ss_pred             ccccccccccccccceeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEecCCCCeecc
Confidence            211  1111223334456666666544     35677887765543321111  1123344458888888876553    


Q ss_pred             -EEEEeCCCC
Q psy9182         459 -IKVWNLVAA  467 (486)
Q Consensus       459 -v~iwdl~~~  467 (486)
                       |.+||+.+.
T Consensus       259 ~v~~yd~~~~  268 (288)
T d1zgka1         259 SVECYDPDTD  268 (288)
T ss_dssp             EEEEEETTTT
T ss_pred             eEEEEECCCC
Confidence             788998864

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.17  E-value=4.8  Score=32.70  Aligned_cols=158  Identities=13%  Similarity=0.020  Sum_probs=92.1

Q ss_pred             eEEEEeCCCEEEEE-ecCCeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEe--CCCcEEEEECCCCcEEEEec
Q psy9182         237 VYCLQYDDHKIVSG-LRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS--SDSTVRVWDVNTGEMVNTLI  311 (486)
Q Consensus       237 v~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~dg~i~vwd~~~~~~~~~~~  311 (486)
                      -+++.+.++.|... ...+.|.+.++........+.........+..+  ..+++...  ..+.|.-.++..........
T Consensus        81 glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~  160 (266)
T d1ijqa1          81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT  160 (266)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred             eEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccc
Confidence            45666655555544 456789999988766555555555556677663  34444433  34567777775444433333


Q ss_pred             ccCccEEEEEEc--CCeEEEE-eCCCcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEe-CCCcEEEEECCCc
Q psy9182         312 HHCEAVLHLRFS--NGMMVTC-SKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSAS-GDRTIKVWNTSSC  387 (486)
Q Consensus       312 ~~~~~i~~~~~~--~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~d~~i~iwd~~~~  387 (486)
                      ..-.....++++  .+.|+.+ ...+.|...|+........ ............+++++.+|+.+. .++.|...+..++
T Consensus       161 ~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~-~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred             cccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEE-EeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCC
Confidence            333456677776  3445444 5678899899866543222 212222234556777666665554 5677888887777


Q ss_pred             eEEEEEcC
Q psy9182         388 EFVRTLNG  395 (486)
Q Consensus       388 ~~~~~~~~  395 (486)
                      +....+..
T Consensus       240 ~~~~~~~~  247 (266)
T d1ijqa1         240 SDVNLLAE  247 (266)
T ss_dssp             CCCEEEEC
T ss_pred             cceEEEEc
Confidence            65555543

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.13  E-value=4.8  Score=32.71  Aligned_cols=186  Identities=10%  Similarity=0.076  Sum_probs=91.2

Q ss_pred             eCCCEEEEEec---------CCeEEEEECCCceeeEEE--cCCcccEEEEEecCCEEEEEeCCCc-----EEEEECCCCc
Q psy9182         242 YDDHKIVSGLR---------DNTIKVWDRVSLQCIKVL--TGHTGSVLCLQYDERVIISGSSDST-----VRVWDVNTGE  305 (486)
Q Consensus       242 ~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg~-----i~vwd~~~~~  305 (486)
                      .+++.++.|+.         -..+.+||..+.+....-  ......-.+...+++.++.++.++.     ...+|..+..
T Consensus        49 ~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~  128 (288)
T d1zgka1          49 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDE  128 (288)
T ss_dssp             ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred             ECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceeccccceeeEEecceecccccceeeeeccccCc
Confidence            46666666653         235778887765543321  1111122344446766666654443     4456766654


Q ss_pred             EEEEeccc--CccEEEEEEcCCeEEEEeCC-----CcEEEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCC--
Q psy9182         306 MVNTLIHH--CEAVLHLRFSNGMMVTCSKD-----RSIAVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGD--  376 (486)
Q Consensus       306 ~~~~~~~~--~~~i~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--  376 (486)
                      ....-...  ..........+..++.|+.+     ..+..||..+.+.... ...............++..++.++.+  
T Consensus       129 ~~~~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~i~GG~~~~  207 (288)
T d1zgka1         129 WHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI-TAMNTIRSGAGVCVLHNCIYAAGGYDGQ  207 (288)
T ss_dssp             EEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred             cccccccccccccceeeeeeecceEecCcccccccceEEEeeccccccccc-cccccccccccccceeeeEEEecCcccc
Confidence            32211111  11122223334445555442     4577888766532211 11111112222333366666665543  


Q ss_pred             ---CcEEEEECCCceEEEEEc--CCcccEEEEEeCCCEEEEEeCCC-----cEEEEECCCCe
Q psy9182         377 ---RTIKVWNTSSCEFVRTLN--GHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGA  428 (486)
Q Consensus       377 ---~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~  428 (486)
                         .....+|..+.+....-.  .......++..++++++.|+.++     .|.+||+.+.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         208 DQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             SBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             ccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEecCCCCeecceEEEEECCCCE
Confidence               356778877755433211  11222345556788888877554     37889998653

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=89.01  E-value=4  Score=31.63  Aligned_cols=207  Identities=10%  Similarity=0.100  Sum_probs=109.6

Q ss_pred             CCCEEEEEecCCeEEEEECCCceeeEEEcCCcccEEEEE-ecC--CEEEEE------eCCCcEEEEECCCCcEEEEeccc
Q psy9182         243 DDHKIVSGLRDNTIKVWDRVSLQCIKVLTGHTGSVLCLQ-YDE--RVIISG------SSDSTVRVWDVNTGEMVNTLIHH  313 (486)
Q Consensus       243 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~-~~~--~~l~~~------~~dg~i~vwd~~~~~~~~~~~~~  313 (486)
                      +.+.++++...|.+.++-+..++.++.-+   .+|.... +..  .++..+      -.-..|.+-++...-....+...
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLtk---ePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~sp  101 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLNR---EPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV  101 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECCS---SCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTS
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEec---ccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecCC
Confidence            44578888899999999877776654332   3332221 111  122111      11123555555432233334333


Q ss_pred             C-ccEEEEEEcC-CeEEEEeCCCcEEEEECCCCCceeeEEeee------cCcccEEEEEe---CCCEEEEEeC-CCcEEE
Q psy9182         314 C-EAVLHLRFSN-GMMVTCSKDRSIAVWDMVSPNEITLRRVLV------GHRAAVNVVDF---DEKYIVSASG-DRTIKV  381 (486)
Q Consensus       314 ~-~~i~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~~~v~~~~~---~~~~l~~~~~-d~~i~i  381 (486)
                      . -.|.++++.+ +.+++|+......+|-++.++...+.....      -....|..+.+   +.+-++++.. .|.+++
T Consensus       102 k~vRI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri  181 (313)
T d2hu7a1         102 KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV  181 (313)
T ss_dssp             CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEE
T ss_pred             ceEEEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEE
Confidence            3 6788888875 478899999999999998876543332210      01223333333   2233555554 677777


Q ss_pred             EECCCceEEEEEcCCcccEEEEEeCCCEEEEEeC----CCcEEEEECCCCeeeEEecCc-------ccCeEEEEe--cCC
Q psy9182         382 WNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSS----DNTIRLWDIECGACLRVLEGH-------EELVRCIRF--DAK  448 (486)
Q Consensus       382 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~----dg~v~iwd~~~~~~~~~~~~h-------~~~v~~~~~--~~~  448 (486)
                      ++...|..-.........|          +++-+    ..-| -+|+++++.-..--..       .-.|+-+-+  +++
T Consensus       182 ~tpkeGS~~~ay~~~gnKV----------~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~  250 (313)
T d2hu7a1         182 FDSGEGSFSSASISPGMKV----------TAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGR  250 (313)
T ss_dssp             ECCSSEEEEEEEECTTSCE----------EEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSC
T ss_pred             ecCCCCcccceeEccCcee----------eeccCCCCceEEE-EEecccCceeeeecCcccceeecceEEEeeeeCCCCc
Confidence            7766665443333222222          22211    1112 3467665543321111       112333334  677


Q ss_pred             EEEEEeCCCcEEEEe
Q psy9182         449 RIVSGAYDGKIKVWN  463 (486)
Q Consensus       449 ~l~s~~~dg~v~iwd  463 (486)
                      +++.+-.||.=++|.
T Consensus       251 L~iiakrdG~s~lF~  265 (313)
T d2hu7a1         251 LAVVARREGRSAVFI  265 (313)
T ss_dssp             EEEEEEETTEEEEEE
T ss_pred             EEEEEecCCchheee
Confidence            778899999999887

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.14  E-value=5.6  Score=32.24  Aligned_cols=212  Identities=10%  Similarity=0.037  Sum_probs=117.7

Q ss_pred             CeEEEEECCCceeeEEEcCCcccEEEEEec--CCEEEEEe-CCCcEEEEECCCCc----EEEEecccCccEEEEEEc--C
Q psy9182         254 NTIKVWDRVSLQCIKVLTGHTGSVLCLQYD--ERVIISGS-SDSTVRVWDVNTGE----MVNTLIHHCEAVLHLRFS--N  324 (486)
Q Consensus       254 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~dg~i~vwd~~~~~----~~~~~~~~~~~i~~~~~~--~  324 (486)
                      ..|+-.++.+.+....+. ....+.++.+|  .+.+.-.. ..+.|.-.++....    ....+......+..++++  .
T Consensus        10 ~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~   88 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH   88 (266)
T ss_dssp             SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred             CeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeecc
Confidence            358888887765554444 34456778874  45555544 45667666664321    112222223344456654  5


Q ss_pred             CeE-EEEeCCCcEEEEECCCCCceeeEEeeecCcccEEEEEe--CCCEEEEEe--CCCcEEEEECCCceEEEEEcCCccc
Q psy9182         325 GMM-VTCSKDRSIAVWDMVSPNEITLRRVLVGHRAAVNVVDF--DEKYIVSAS--GDRTIKVWNTSSCEFVRTLNGHKRG  399 (486)
Q Consensus       325 ~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~  399 (486)
                      +.+ ++-...+.|.+.++.......   ...........+..  ...+++...  ..+.|.-.++............-..
T Consensus        89 ~~lY~~d~~~~~I~v~~~~g~~~~~---~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~  165 (266)
T d1ijqa1          89 SNIYWTDSVLGTVSVADTKGVKRKT---LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW  165 (266)
T ss_dssp             TEEEEEETTTTEEEEEETTSSSEEE---EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred             ceEEEEecCCCEEEeEecCCceEEE---EEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccccce
Confidence            544 444566789999987655332   22233344455555  344554443  3346777776554433333333345


Q ss_pred             EEEEEeC--CCE-EEEEeCCCcEEEEECCCCeeeEEe--cCcccCeEEEEecCCEEEEEe-CCCcEEEEeCCCCCC
Q psy9182         400 IACLQYR--DRL-VVSGSSDNTIRLWDIECGACLRVL--EGHEELVRCIRFDAKRIVSGA-YDGKIKVWNLVAALD  469 (486)
Q Consensus       400 v~~~~~~--~~~-l~~~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~l~s~~-~dg~v~iwdl~~~~~  469 (486)
                      ...++.+  ++. ..+-...+.|...++.........  ........+|++++.+|.-+. .++.|...+..++..
T Consensus       166 p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g~~  241 (266)
T d1ijqa1         166 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD  241 (266)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred             eeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCCcc
Confidence            5677765  454 444466788999998754333333  222345678888666666554 678888888776654

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=85.26  E-value=11  Score=32.76  Aligned_cols=219  Identities=15%  Similarity=0.162  Sum_probs=124.3

Q ss_pred             EEEEecCCeEEEEECCCceeeEEEcCC----------c-----------------------------ccE--EEEEe---
Q psy9182         247 IVSGLRDNTIKVWDRVSLQCIKVLTGH----------T-----------------------------GSV--LCLQY---  282 (486)
Q Consensus       247 l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~-----------------------------~~v--~~~~~---  282 (486)
                      +.+|+..|.|+|+-+.+++.++.+...          .                             +..  -.+++   
T Consensus        16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG   95 (459)
T d1fwxa2          16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   95 (459)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence            678899999999998888777665310          0                             000  23444   


Q ss_pred             --cCCEEEEEe-CCCcEEEEECCCCcEEEEecc-cCccEEEEEEc--C--CeEEEEeCCC------------------cE
Q psy9182         283 --DERVIISGS-SDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFS--N--GMMVTCSKDR------------------SI  336 (486)
Q Consensus       283 --~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~-~~~~i~~~~~~--~--~~l~~~~~dg------------------~i  336 (486)
                        ||+++++.. .++.|.+.|+++.+....+.. ....+..+...  +  .+++.++...                  .+
T Consensus        96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~  175 (459)
T d1fwxa2          96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  175 (459)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred             ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence              577877766 578899999999988664433 23345555553  2  2666665532                  25


Q ss_pred             EEEECCCCCceeeEEeeecCcccEEEEEeCCCEEEEEeCCC---------------cEEEEECCC-------ce--E---
Q psy9182         337 AVWDMVSPNEITLRRVLVGHRAAVNVVDFDEKYIVSASGDR---------------TIKVWNTSS-------CE--F---  389 (486)
Q Consensus       337 ~i~d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~---------------~i~iwd~~~-------~~--~---  389 (486)
                      .++|..+.+...  +...+....-.....+|+++++.+.+.               .+.++|...       ++  .   
T Consensus       176 t~ID~~tm~V~~--QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eing  253 (459)
T d1fwxa2         176 TAVDADKWEVAW--QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  253 (459)
T ss_dssp             EEEETTTTEEEE--EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEecCCceEEE--EeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCC
Confidence            677877655432  333333334445666899988877431               233444211       00  0   


Q ss_pred             EEEEcCC---cccE------------EEEEeCCCEEEEEe-CCCcEEEEECCCCee-----------eEEecCcccCeEE
Q psy9182         390 VRTLNGH---KRGI------------ACLQYRDRLVVSGS-SDNTIRLWDIECGAC-----------LRVLEGHEELVRC  442 (486)
Q Consensus       390 ~~~~~~~---~~~v------------~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~-----------~~~~~~h~~~v~~  442 (486)
                      +..+...   ...+            ..++.+|+++++++ .+.+|.|+|++.-..           +..-....-.-..
T Consensus       254 V~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLh  333 (459)
T d1fwxa2         254 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH  333 (459)
T ss_dssp             EEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEE
T ss_pred             ceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccc
Confidence            1111111   0111            24455788876655 689999999963111           1111112234456


Q ss_pred             EEecCCE--EEEEeCCCcEEEEeCCCC
Q psy9182         443 IRFDAKR--IVSGAYDGKIKVWNLVAA  467 (486)
Q Consensus       443 ~~~~~~~--l~s~~~dg~v~iwdl~~~  467 (486)
                      -+||++-  ..|---|..|.-|++...
T Consensus       334 t~fd~~g~aytslfids~v~kw~~~~~  360 (459)
T d1fwxa2         334 TAFDGRGNAYTSLFLDSQVVKWNIEDA  360 (459)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred             cccCCCceEEEEeeccceEEEEecchh
Confidence            6785543  334447999999998643

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.80  E-value=16  Score=31.87  Aligned_cols=115  Identities=11%  Similarity=0.107  Sum_probs=62.9

Q ss_pred             ccEEEEEEcCCeEEEEe----CCCcEEEEECCCCCceeeEEeeecCcccEE--EEEeCCCEEEEE-eCCC--cEEEEECC
Q psy9182         315 EAVLHLRFSNGMMVTCS----KDRSIAVWDMVSPNEITLRRVLVGHRAAVN--VVDFDEKYIVSA-SGDR--TIKVWNTS  385 (486)
Q Consensus       315 ~~i~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~l~~~-~~d~--~i~iwd~~  385 (486)
                      .....+...++.++.-+    .++.|...++..............+...+.  .+.+.+.+|+.. ..++  .|++++..
T Consensus       288 ~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~  367 (430)
T d1qfma1         288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLA  367 (430)
T ss_dssp             SCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT
T ss_pred             cceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECC
Confidence            33444444555444433    346777778776544322233434444333  444556666554 3444  58889998


Q ss_pred             CceEEEEEcCCcccEEEEEeC--CC-EEEEEe---CCCcEEEEECCCCee
Q psy9182         386 SCEFVRTLNGHKRGIACLQYR--DR-LVVSGS---SDNTIRLWDIECGAC  429 (486)
Q Consensus       386 ~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~---~dg~v~iwd~~~~~~  429 (486)
                      +++.........+.+..+..+  .. +.++-+   .-.++.-+|+.+++.
T Consensus       368 ~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~  417 (430)
T d1qfma1         368 TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL  417 (430)
T ss_dssp             TCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred             CCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCc
Confidence            887766555445555555542  33 333222   236788888887753

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.16  E-value=16  Score=31.71  Aligned_cols=229  Identities=13%  Similarity=0.087  Sum_probs=117.1

Q ss_pred             EEEEeCCCEEEEEe-cCC----eEEEEECCCceeeEE-EcCCcccEEEEEe--cCCEEEEEeCC----------------
Q psy9182         238 YCLQYDDHKIVSGL-RDN----TIKVWDRVSLQCIKV-LTGHTGSVLCLQY--DERVIISGSSD----------------  293 (486)
Q Consensus       238 ~~~~~~~~~l~~~~-~dg----~i~i~d~~~~~~~~~-~~~~~~~v~~~~~--~~~~l~~~~~d----------------  293 (486)
                      .+++|++++++.+- .+|    .|+++|+.+++.+.. +..  .....+.|  |++.|+-...+                
T Consensus       130 ~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~  207 (430)
T d1qfma1         130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH  207 (430)
T ss_dssp             EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred             eEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc--ccccceEEcCCCCEEEEEEeccccCcccccccccCCc
Confidence            46788998887543 233    699999999987642 221  11134556  66666543322                


Q ss_pred             CcEEEEECCCCcE--EEEeccc--CccEEEEEEcCC--eEEE-Ee--CCCc--EEEEECCCCCce-----eeEEeeecCc
Q psy9182         294 STVRVWDVNTGEM--VNTLIHH--CEAVLHLRFSNG--MMVT-CS--KDRS--IAVWDMVSPNEI-----TLRRVLVGHR  357 (486)
Q Consensus       294 g~i~vwd~~~~~~--~~~~~~~--~~~i~~~~~~~~--~l~~-~~--~dg~--i~i~d~~~~~~~-----~~~~~~~~~~  357 (486)
                      ..|..+.+.+...  ...+...  ...+..+..+.+  +++. ..  .++.  +.+.|+......     ..........
T Consensus       208 ~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  287 (430)
T d1qfma1         208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE  287 (430)
T ss_dssp             CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred             ceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecccc
Confidence            2477777766532  2223322  233455555533  4332 22  2233  444454432211     1112222333


Q ss_pred             ccEEEEEeCCCEEEE-Ee---CCCcEEEEECCCceE---EEEEcCCcccE--EEEEeCCCEEEEEe-CCC--cEEEEECC
Q psy9182         358 AAVNVVDFDEKYIVS-AS---GDRTIKVWNTSSCEF---VRTLNGHKRGI--ACLQYRDRLVVSGS-SDN--TIRLWDIE  425 (486)
Q Consensus       358 ~~v~~~~~~~~~l~~-~~---~d~~i~iwd~~~~~~---~~~~~~~~~~v--~~~~~~~~~l~~~~-~dg--~v~iwd~~  425 (486)
                      .....+..++..++. ..   .++.|...++.....   ...+..+...+  ..+...+++|+... .++  .|+++++.
T Consensus       288 ~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~  367 (430)
T d1qfma1         288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLA  367 (430)
T ss_dssp             SCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT
T ss_pred             cceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECC
Confidence            334444444444433 32   245677777665322   22233344434  34455566665554 554  48899999


Q ss_pred             CCeeeEEecCcccCeEEEEe--cCC-EEEEEeC---CCcEEEEeCCCCC
Q psy9182         426 CGACLRVLEGHEELVRCIRF--DAK-RIVSGAY---DGKIKVWNLVAAL  468 (486)
Q Consensus       426 ~~~~~~~~~~h~~~v~~~~~--~~~-~l~s~~~---dg~v~iwdl~~~~  468 (486)
                      +++.........+.|..+..  +.. ..++-+.   =.++.-+|+.++.
T Consensus       368 ~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         368 TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             TCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            88776655545555665554  333 3333221   2678888888764