Psyllid ID: psy9281

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNHR
Secondary Structure (PSIPRED)
cccHHHHHHHHcHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHcHHHcccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHcccccHHHHHHccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHccccEEEEEEcEEEEcHHHHHHHHccEEEEEcccEEEcHHHHHccccccccccHHHHHHcHHHHHHHHHHcccEEHHHHHHcccccEEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHccc
Coil and Loop (DISEMBL)
MFHFEKLFILIDYEqkdlyrsknlkfIQCLKIWIYLGGGCELAMMCDIIYagekakfgqpeiiigtmpgaggtqrltrAAGKSNAMEICLTGNQFTAQEAKEMgvvskifppekLLEETIKLAERIGEHSPLIVTQVKEavniddteglnhr
Flexible Loop (DISEMBL)
MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAErigehsplivtqvkeavniddteglnhr
Low Complexity Region (SEG)
MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNHR
Disordered region (IsUnstruct)
**HFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTM***********************************MGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV***********
Disordered Region (DISOPRED)
*FHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTE*****
Disordered Region (DISEMBL)
MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNHR
Disordered Region (DISPRO)
MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNHR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
P34559	288	Probable enoyl-CoA hydrat	yes	N/A	0.703	0.371	0.738	7e-41
Q8BH95	290	Enoyl-CoA hydratase, mito	yes	N/A	0.703	0.368	0.700	3e-39
P14604	290	Enoyl-CoA hydratase, mito	yes	N/A	0.703	0.368	0.700	1e-38
Q58DM8	290	Enoyl-CoA hydratase, mito	yes	N/A	0.703	0.368	0.682	6e-38
P30084	290	Enoyl-CoA hydratase, mito	yes	N/A	0.828	0.434	0.551	3e-37
Q5R646	290	Enoyl-CoA hydratase, mito	yes	N/A	0.828	0.434	0.544	2e-36
Q1ZXF1	277	Probable enoyl-CoA hydrat	yes	N/A	0.703	0.386	0.672	7e-35
Q52995	257	Probable enoyl-CoA hydrat	yes	N/A	0.703	0.416	0.570	1e-29
P76082	255	2,3-dehydroadipyl-CoA hyd	N/A	N/A	0.697	0.415	0.518	5e-29
P64016	257	Probable enoyl-CoA hydrat	yes	N/A	0.703	0.416	0.532	3e-27

>sp|P34559|ECHM_CAEEL Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1

 Score =  166 bits (419), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 79/107 (73%), Positives = 90/107 (84%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELAMMCDIIYAGEKA+FGQPEI IGT+PGAGGTQR  RAAGKS AME+CLTGN  
Sbjct: 137 LGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHV 196

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TAQEAKE G+VSKIFP ++++ E +KL E+I + SPLIV   KEAVN
Sbjct: 197 TAQEAKEHGIVSKIFPADQVVGEAVKLGEKIADQSPLIVQMAKEAVN 243

Caenorhabditis elegans (taxid: 6239)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 7

>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1

 Score =  160 bits (405), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 93/107 (86%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 139 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP EKL+EE I+ AE+I  +S ++V   KE+VN
Sbjct: 199 SAQDAKQAGLVSKIFPVEKLVEEAIQCAEKIASNSKIVVAMAKESVN 245

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 92/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 139 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct: 199 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 245

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1

 Score =  156 bits (394), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 73/107 (68%), Positives = 91/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 139 LGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E ++EE I+ AE+I  +S ++    KE+VN
Sbjct: 199 SAQDAKQAGLVSKIFPVETVVEEAIQCAEKIASNSKIVTAMAKESVN 245

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Bos taurus (taxid: 9913)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1 SV=4

 Score =  154 bits (388), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 101/147 (68%), Gaps = 21/147 (14%)

Query: 17  DLYRSKNLKFIQC-----LKIWIYL----------------GGGCELAMMCDIIYAGEKA 55
           D+   +NL F  C     LK W +L                GGGCELAMMCDIIYAGEKA
Sbjct: 99  DIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKA 158

Query: 56  KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL 115
           +F QPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++ +AQ+AK+ G+VSKI P E L
Sbjct: 159 QFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETL 218

Query: 116 LEETIKLAERIGEHSPLIVTQVKEAVN 142
           +EE I+ AE+I  +S ++V   KE+VN
Sbjct: 219 VEEAIQCAEKIASNSKIVVAMAKESVN 245

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2 SV=1

 Score =  150 bits (380), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/147 (54%), Positives = 99/147 (67%), Gaps = 21/147 (14%)

Query: 17  DLYRSKNLKFIQC-----LKIWIYL----------------GGGCELAMMCDIIYAGEKA 55
           D+   +NL F  C     LK W +L                GGGCELAMMCDIIYAGEKA
Sbjct: 99  DIKEMQNLSFQDCYSSKFLKHWDHLTQIKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKA 158

Query: 56  KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL 115
           +F QPEI+IGT+PGAGGTQRLTR  GKS AME+ LTG++ +AQ+AK+ G+VSKI P E L
Sbjct: 159 QFAQPEILIGTIPGAGGTQRLTRTVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETL 218

Query: 116 LEETIKLAERIGEHSPLIVTQVKEAVN 142
           +EE I+ AE+I  +S +I    KE+VN
Sbjct: 219 VEEAIQCAEKIASNSKIIAAMAKESVN 245

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q1ZXF1|ECHM_DICDI Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1

 Score =  145 bits (367), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/107 (67%), Positives = 83/107 (77%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDII AGEKA FGQPEI +GT+PG GGTQRL RA GKS AME+ LTGN  
Sbjct: 126 LGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNL 185

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA EA++ G+VSK+ P E+LL E  K+AE+I  +S L V   KEAVN
Sbjct: 186 TAVEAEKAGLVSKVVPVEELLTEATKMAEKIASYSQLTVAMAKEAVN 232

Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.

Dictyostelium discoideum (taxid: 44689)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|Q52995|ECHH_RHIME Probable enoyl-CoA hydratase OS=Rhizobium meliloti (strain 1021) GN=fadB1 PE=3 SV=2

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 75/107 (70%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCD I A E AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG   
Sbjct: 106 LGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMM 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++  P++LLEE +  AE+I   S       KEAVN
Sbjct: 166 DAAEAERSGLVSRVVAPDRLLEEALGAAEKIASFSLPAAMMAKEAVN 212

Could possibly oxidize fatty acids using specific components.

Rhizobium meliloti (strain 1021) (taxid: 266834)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P76082|PAAF_ECOLI 2,3-dehydroadipyl-CoA hydratase OS=Escherichia coli (strain K12) GN=paaF PE=1 SV=1

 Score =  126 bits (316), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 55/106 (51%), Positives = 78/106 (73%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG GCELA++CD++ AGE A+FG PEI +G MPGAGGTQRL R+ GKS A ++ L+G   
Sbjct: 104 LGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESI 163

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TAQ+A++ G+VS +FP +  LE  ++LA ++  HSPL +   K+A+
Sbjct: 164 TAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQAL 209

Catalyzes the reversible conversion of enzymatically produced 2,3-dehydroadipyl-CoA into 3-hydroxyadipyl-CoA.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 72/107 (67%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG   
Sbjct: 106 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++ P + LL E    A  I + S       KEAVN
Sbjct: 166 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 212

Could possibly oxidize fatty acids using specific components.

Mycobacterium tuberculosis (taxid: 1773)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
328708752	292	PREDICTED: probable enoyl-CoA hydratase,	0.703	0.366	0.766	7e-43
359843262	283	enoyl-CoA hydratase, partial [Schistocer	0.703	0.378	0.794	2e-42
261335974	297	putative enoyl-CoA hydratase precursor [	0.703	0.360	0.794	1e-41
389608935	297	cyclohex-1-ene-1-carboxyl-CoA hydratase	0.703	0.360	0.794	2e-41
308512715	296	enoyl-CoA hydratase [Biston betularia]	0.703	0.361	0.775	1e-40
87248109	296	enoyl-CoA hydratase precursor 1 [Bombyx	0.703	0.361	0.785	2e-40
87248113	278	enoyl-CoA hydratase precursor 3 [Bombyx	0.703	0.384	0.785	3e-40
87248111	279	enoyl-CoA hydratase precursor 2 [Bombyx	0.703	0.383	0.785	3e-40
242013706	274	enoyl-CoA hydratase, putative [Pediculus	0.703	0.390	0.719	2e-39
322799329	296	hypothetical protein SINV_11170 [Solenop	0.703	0.361	0.728	3e-39

>gi|328708752|ref|XP_003243793.1| PREDICTED: probable enoyl-CoA hydratase, mitochondrial-like [Acyrthosiphon pisum]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 95/107 (88%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKAKFGQPEI+IGT+PGAGGTQR+ R+ GKS AME+CL+GNQ 
Sbjct: 141 LGGGCELAMMCDIIYAGEKAKFGQPEIVIGTIPGAGGTQRMIRSCGKSFAMEVCLSGNQI 200

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQEA   G+VSK+FPPEKL++E IKLAE+I EHSPLIV   KE+VN
Sbjct: 201 SAQEALSRGLVSKVFPPEKLVDEAIKLAEKISEHSPLIVALCKESVN 247

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|359843262|gb|AEV89766.1| enoyl-CoA hydratase, partial [Schistocerca gregaria]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/107 (79%), Positives = 93/107 (86%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKAKFGQPEI IGT+PGAGGTQRL R  GKS AMEICLTGNQ 
Sbjct: 170 LGGGCELAMMCDIIYAGEKAKFGQPEIAIGTIPGAGGTQRLPRMVGKSKAMEICLTGNQV 229

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TAQEA++MG+VSK+FP ++LL E IKLAE+I  HSPLIV   KEAVN
Sbjct: 230 TAQEAEKMGLVSKVFPTDQLLPEAIKLAEKISSHSPLIVALCKEAVN 276

Source: Schistocerca gregaria

Species: Schistocerca gregaria

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|261335974|emb|CBH09259.1| putative enoyl-CoA hydratase precursor [Heliconius melpomene] gi|261335983|emb|CBH09263.1| putative enoyl-CoA hydratase [Heliconius melpomene]

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/107 (79%), Positives = 93/107 (86%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CDIIYAGEKAKFGQPEI IGT+PGAGGTQRL R  GKS AMEI LTGN  
Sbjct: 146 LGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFI 205

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            AQEA++MG+VS++FP EKLLEETIKLAERIG HSPLIV   K+AVN
Sbjct: 206 DAQEAEKMGLVSRVFPVEKLLEETIKLAERIGTHSPLIVKMAKQAVN 252

Source: Heliconius melpomene

Species: Heliconius melpomene

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608935|dbj|BAM18079.1| cyclohex-1-ene-1-carboxyl-CoA hydratase [Papilio xuthus]

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/107 (79%), Positives = 93/107 (86%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CDIIYAGEKAKFGQPEI IGT+PGAGGTQRL R  GKS AMEI LTGN  
Sbjct: 146 LGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFI 205

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            AQEA++MG+VSK+FP EKLLEETIKLAERIG HSPLIV   K++VN
Sbjct: 206 DAQEAEKMGLVSKVFPVEKLLEETIKLAERIGTHSPLIVKMAKQSVN 252

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|308512715|gb|ADO33011.1| enoyl-CoA hydratase [Biston betularia]

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/107 (77%), Positives = 92/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CDIIYAGEKAKFGQPEI IGT+PGAGGTQRL R  GKS AMEI LTGN  
Sbjct: 145 LGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFI 204

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA++MG+VS++FP +KLLEETIKLAERIG HSPLIV   K+AVN
Sbjct: 205 DAHEAEKMGLVSRVFPVDKLLEETIKLAERIGTHSPLIVKMAKQAVN 251

Source: Biston betularia

Species: Biston betularia

Genus: Biston

Family: Geometridae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|87248109|gb|ABD36107.1| enoyl-CoA hydratase precursor 1 [Bombyx mori]

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/107 (78%), Positives = 91/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CDIIYAGEKAKFGQPEI IGT+PGAGGTQRL    GKS AMEI LTGN F
Sbjct: 145 LGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPSYVGKSKAMEIVLTGNFF 204

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA++MG+VSK+FP EKLLEETIKLAE IG HSPLIV   K+AVN
Sbjct: 205 DAHEAEKMGLVSKVFPVEKLLEETIKLAESIGTHSPLIVKLAKQAVN 251

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|87248113|gb|ABD36109.1| enoyl-CoA hydratase precursor 3 [Bombyx mori]

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/107 (78%), Positives = 91/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CDIIYAGEKAKFGQPEI IGT+PGAGGTQRL    GKS AMEI LTGN F
Sbjct: 127 LGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPSYVGKSKAMEIVLTGNFF 186

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA++MG+VSK+FP EKLLEETIKLAE IG HSPLIV   K+AVN
Sbjct: 187 DAHEAEKMGLVSKVFPVEKLLEETIKLAESIGTHSPLIVKLAKQAVN 233

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|87248111|gb|ABD36108.1| enoyl-CoA hydratase precursor 2 [Bombyx mori]

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 84/107 (78%), Positives = 91/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CDIIYAGEKAKFGQPEI IGT+PGAGGTQRL    GKS AMEI LTGN F
Sbjct: 128 LGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPSYVGKSKAMEIVLTGNFF 187

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA++MG+VSK+FP EKLLEETIKLAE IG HSPLIV   K+AVN
Sbjct: 188 DAHEAEKMGLVSKVFPVEKLLEETIKLAESIGTHSPLIVKLAKQAVN 234

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013706|ref|XP_002427543.1| enoyl-CoA hydratase, putative [Pediculus humanus corporis] gi|212511945|gb|EEB14805.1| enoyl-CoA hydratase, putative [Pediculus humanus corporis]

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/107 (71%), Positives = 93/107 (86%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAG KA+FGQPEI IGT+PG GGTQRLTRA GKSNAME+CLTG+Q 
Sbjct: 123 LGGGCELAMMCDIIYAGAKARFGQPEIKIGTIPGVGGTQRLTRAVGKSNAMEMCLTGDQI 182

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA++AK MG+VSKI+PPE+L+ + I+L ++I + SPL+V   KEAVN
Sbjct: 183 TAEDAKAMGLVSKIYPPEELVNKAIELGDKIADCSPLVVLMCKEAVN 229

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799329|gb|EFZ20717.1| hypothetical protein SINV_11170 [Solenopsis invicta]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 78/107 (72%), Positives = 92/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAG+KAKFGQPEI IGT+PGAGGTQRL RA GKS AME+ LTGN  
Sbjct: 145 LGGGCELAMMCDIIYAGDKAKFGQPEIAIGTIPGAGGTQRLPRAIGKSKAMEMALTGNMI 204

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A+EA++ G+VSK+FP ++L+ E IKLAE+IG HSPL+V   KEAVN
Sbjct: 205 SAEEAEKSGLVSKVFPADQLVGEAIKLAEKIGTHSPLVVAIAKEAVN 251

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
WB|WBGene00001155	288	ech-6 [Caenorhabditis elegans	0.703	0.371	0.738	8.9e-38
FB|FBgn0033879	295	CG6543 [Drosophila melanogaste	0.703	0.362	0.710	1.9e-37
MGI|MGI:2136460	290	Echs1 "enoyl Coenzyme A hydrat	0.703	0.368	0.700	4.9e-37
RGD|69330	290	Echs1 "enoyl CoA hydratase, sh	0.703	0.368	0.700	1.7e-36
UNIPROTKB|Q58DM8	290	ECHS1 "Enoyl-CoA hydratase, mi	0.703	0.368	0.682	7.2e-36
UNIPROTKB|F1PAZ6	225	ECHS1 "Uncharacterized protein	0.703	0.475	0.672	1.9e-35
ZFIN|ZDB-GENE-030616-617	291	echs1 "enoyl Coenzyme A hydrat	0.703	0.367	0.672	6.5e-35
UNIPROTKB|P30084	290	ECHS1 "Enoyl-CoA hydratase, mi	0.697	0.365	0.679	1.1e-34
DICTYBASE|DDB_G0285071	277	echs1 "enoyl-CoA hydratase" [D	0.703	0.386	0.672	2.5e-33
UNIPROTKB|F1SAC1	289	ECHS1 "Uncharacterized protein	0.697	0.366	0.654	1.4e-32

WB|WBGene00001155 ech-6 [Caenorhabditis elegans (taxid:6239)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 79/107 (73%), Positives = 90/107 (84%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGG ELAMMCDIIYAGEKA+FGQPEI IGT+PGAGGTQR  RAAGKS AME+CLTGN  
Sbjct:   137 LGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHV 196

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             TAQEAKE G+VSKIFP ++++ E +KL E+I + SPLIV   KEAVN
Sbjct:   197 TAQEAKEHGIVSKIFPADQVVGEAVKLGEKIADQSPLIVQMAKEAVN 243

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

FB|FBgn0033879 CG6543 [Drosophila melanogaster (taxid:7227)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 76/107 (71%), Positives = 89/107 (83%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDIIYAG+KAKFGQPEI +GT+PGAGGTQRLTR  GKS AME+CLTGN  
Sbjct:   144 LGGGCELAMMCDIIYAGDKAKFGQPEIALGTIPGAGGTQRLTRVVGKSKAMEMCLTGNMI 203

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
              AQEA+++G+ SK+ P ++LL E +KL E+IG HS LIV   KEAVN
Sbjct:   204 GAQEAEKLGLASKVVPADQLLGEAVKLGEKIGTHSNLIVQLCKEAVN 250

GO:0004300 "enoyl-CoA hydratase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0005811 "lipid particle" evidence=IDA

GO:0005875 "microtubule associated complex" evidence=IDA

MGI|MGI:2136460 Echs1 "enoyl Coenzyme A hydratase, short chain, 1, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 75/107 (70%), Positives = 93/107 (86%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct:   139 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +AQ+AK+ G+VSKIFP EKL+EE I+ AE+I  +S ++V   KE+VN
Sbjct:   199 SAQDAKQAGLVSKIFPVEKLVEEAIQCAEKIASNSKIVVAMAKESVN 245

GO:0003824 "catalytic activity" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006635 "fatty acid beta-oxidation" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

RGD|69330 Echs1 "enoyl CoA hydratase, short chain, 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 75/107 (70%), Positives = 92/107 (85%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct:   139 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct:   199 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 245

GO:0004300 "enoyl-CoA hydratase activity" evidence=IMP;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA;TAS

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;IMP;TAS

UNIPROTKB|Q58DM8 ECHS1 "Enoyl-CoA hydratase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 73/107 (68%), Positives = 91/107 (85%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDIIYAGEKA+FGQPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct:   139 LGGGCELAMMCDIIYAGEKAQFGQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 198

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +AQ+AK+ G+VSKIFP E ++EE I+ AE+I  +S ++    KE+VN
Sbjct:   199 SAQDAKQAGLVSKIFPVETVVEEAIQCAEKIASNSKIVTAMAKESVN 245

GO:0006635 "fatty acid beta-oxidation" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA

UNIPROTKB|F1PAZ6 ECHS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 72/107 (67%), Positives = 90/107 (84%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDIIYAGEKA+F QPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct:    74 LGGGCELAMMCDIIYAGEKAQFAQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 133

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S ++    KE+VN
Sbjct:   134 SAQDAKQAGLVSKIFPVETLVEEAIRCAEKIASNSKIVTAMAKESVN 180

GO:0005739 "mitochondrion" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

ZFIN|ZDB-GENE-030616-617 echs1 "enoyl Coenzyme A hydratase, short chain, 1, mitochondrial" [Danio rerio (taxid:7955)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 72/107 (67%), Positives = 89/107 (83%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCE AMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct:   140 LGGGCEFAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 199

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +AQEAK+ G+VSKIFP ++L+ E IK  E+I  +S L+    KE+VN
Sbjct:   200 SAQEAKQSGLVSKIFPVDQLVPEAIKCGEKIAGNSKLVSAMAKESVN 246

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

UNIPROTKB|P30084 ECHS1 "Enoyl-CoA hydratase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 72/106 (67%), Positives = 89/106 (83%)

Query:    37 GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
             GGGCELAMMCDIIYAGEKA+F QPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++ +
Sbjct:   140 GGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRIS 199

Query:    97 AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             AQ+AK+ G+VSKI P E L+EE I+ AE+I  +S ++V   KE+VN
Sbjct:   200 AQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAKESVN 245

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;TAS

GO:0005739 "mitochondrion" evidence=IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0004300 "enoyl-CoA hydratase activity" evidence=TAS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

DICTYBASE|DDB_G0285071 echs1 "enoyl-CoA hydratase" [Dictyostelium discoideum (taxid:44689)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 72/107 (67%), Positives = 83/107 (77%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDII AGEKA FGQPEI +GT+PG GGTQRL RA GKS AME+ LTGN  
Sbjct:   126 LGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNL 185

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             TA EA++ G+VSK+ P E+LL E  K+AE+I  +S L V   KEAVN
Sbjct:   186 TAVEAEKAGLVSKVVPVEELLTEATKMAEKIASYSQLTVAMAKEAVN 232

GO:0008152 "metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004300 "enoyl-CoA hydratase activity" evidence=IEA;ISS

GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=IEA;ISS

GO:0016829 "lyase activity" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1SAC1 ECHS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 70/107 (65%), Positives = 87/107 (81%)

Query:    36 LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             LGGGCELAMMCDIIYAGEKA+FGQP +++ T PG GGTQRLTRA GKS  ME+ LTG++ 
Sbjct:   139 LGGGCELAMMCDIIYAGEKAQFGQPALVLPTCPGTGGTQRLTRAVGKSLTMEMVLTGDRI 198

Query:    96 TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +AQEAK+ G+VSKIFP E L+EE I+ AE+I  +S  IVT + ++VN
Sbjct:   199 SAQEAKQAGLVSKIFPVETLVEEAIQCAEKIASYSK-IVTAMAKSVN 244

GO:0003824 "catalytic activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34559	ECHM_CAEEL	4, ., 2, ., 1, ., 1, 7	0.7383	0.7039	0.3715	yes	N/A
O07137	ECHA8_MYCLE	4, ., 2, ., 1, ., 1, 7	0.5233	0.7039	0.4163	yes	N/A
Q5R646	ECHM_PONAB	4, ., 2, ., 1, ., 1, 7	0.5442	0.8289	0.4344	yes	N/A
Q8BH95	ECHM_MOUSE	4, ., 2, ., 1, ., 1, 7	0.7009	0.7039	0.3689	yes	N/A
P30084	ECHM_HUMAN	4, ., 2, ., 1, ., 1, 7	0.5510	0.8289	0.4344	yes	N/A
Q1ZXF1	ECHM_DICDI	4, ., 2, ., 1, ., 1, 7	0.6728	0.7039	0.3862	yes	N/A
P64017	ECHA8_MYCBO	4, ., 2, ., 1, ., 1, 7	0.5327	0.7039	0.4163	yes	N/A
P64016	ECHA8_MYCTU	4, ., 2, ., 1, ., 1, 7	0.5327	0.7039	0.4163	yes	N/A
Q58DM8	ECHM_BOVIN	4, ., 2, ., 1, ., 1, 7	0.6822	0.7039	0.3689	yes	N/A
Q52995	ECHH_RHIME	4, ., 2, ., 1, ., 1, 7	0.5700	0.7039	0.4163	yes	N/A
P14604	ECHM_RAT	4, ., 2, ., 1, ., 1, 7	0.7009	0.7039	0.3689	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	152
PRK05862	257	PRK05862, PRK05862, enoyl-CoA hydratase; Provision	5e-51
pfam00378	245	pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami	2e-45
PRK08138	261	PRK08138, PRK08138, enoyl-CoA hydratase; Provision	5e-45
PRK09674	255	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase;	6e-45
cd06558	195	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme	2e-38
COG1024	257	COG1024, CaiD, Enoyl-CoA hydratase/carnithine race	8e-37
PRK05809	260	PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata	1e-33
PRK06688	259	PRK06688, PRK06688, enoyl-CoA hydratase; Provision	4e-33
PRK05980	260	PRK05980, PRK05980, enoyl-CoA hydratase; Provision	8e-32
PRK07657	260	PRK07657, PRK07657, enoyl-CoA hydratase; Provision	3e-31
PRK07658	257	PRK07658, PRK07658, enoyl-CoA hydratase; Provision	1e-29
PRK08252	254	PRK08252, PRK08252, enoyl-CoA hydratase; Provision	4e-29
PRK06494	259	PRK06494, PRK06494, enoyl-CoA hydratase; Provision	6e-28
PLN02600	251	PLN02600, PLN02600, enoyl-CoA hydratase	4e-26
PRK03580	261	PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr	5e-26
PRK09245	266	PRK09245, PRK09245, enoyl-CoA hydratase; Provision	1e-25
PRK06563	255	PRK06563, PRK06563, enoyl-CoA hydratase; Provision	3e-24
COG0447	282	COG0447, MenB, Dihydroxynaphthoic acid synthase [C	9e-23
PRK06190	258	PRK06190, PRK06190, enoyl-CoA hydratase; Provision	5e-22
PLN02664	275	PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d	7e-22
TIGR01929	259	TIGR01929, menB, naphthoate synthase (dihydroxynap	1e-21
PRK11730	715	PRK11730, fadB, multifunctional fatty acid oxidati	6e-21
PRK06127	269	PRK06127, PRK06127, enoyl-CoA hydratase; Provision	2e-20
PRK08290	288	PRK08290, PRK08290, enoyl-CoA hydratase; Provision	2e-20
PRK07799	263	PRK07799, PRK07799, enoyl-CoA hydratase; Provision	2e-20
PRK11154	708	PRK11154, fadJ, multifunctional fatty acid oxidati	3e-20
PRK07396	273	PRK07396, PRK07396, dihydroxynaphthoic acid synthe	6e-20
PRK06495	257	PRK06495, PRK06495, enoyl-CoA hydratase; Provision	1e-19
PRK08139	266	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	4e-19
TIGR02440	699	TIGR02440, FadJ, fatty oxidation complex, alpha su	5e-19
PRK06142	272	PRK06142, PRK06142, enoyl-CoA hydratase; Provision	5e-19
PRK05869	222	PRK05869, PRK05869, enoyl-CoA hydratase; Validated	7e-19
PRK09076	258	PRK09076, PRK09076, enoyl-CoA hydratase; Provision	7e-19
PRK05981	266	PRK05981, PRK05981, enoyl-CoA hydratase; Provision	2e-17
PLN02921	327	PLN02921, PLN02921, naphthoate synthase	1e-16
TIGR02441	737	TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c	2e-16
TIGR03210	256	TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd	2e-16
TIGR02437	714	TIGR02437, FadB, fatty oxidation complex, alpha su	3e-16
PRK08788	287	PRK08788, PRK08788, enoyl-CoA hydratase; Validated	6e-16
PLN02888	265	PLN02888, PLN02888, enoyl-CoA hydratase	2e-15
PRK05995	262	PRK05995, PRK05995, enoyl-CoA hydratase; Provision	2e-15
PRK07938	249	PRK07938, PRK07938, enoyl-CoA hydratase; Provision	2e-15
TIGR02280	256	TIGR02280, PaaB1, phenylacetate degradation probab	3e-15
PRK08321	302	PRK08321, PRK08321, naphthoate synthase; Validated	7e-15
PRK07511	260	PRK07511, PRK07511, enoyl-CoA hydratase; Provision	8e-15
PRK06210	272	PRK06210, PRK06210, enoyl-CoA hydratase; Provision	8e-15
PRK09120	275	PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata	1e-14
PRK08260	296	PRK08260, PRK08260, enoyl-CoA hydratase; Provision	3e-14
PRK08259	254	PRK08259, PRK08259, enoyl-CoA hydratase; Provision	4e-14
PRK11423	261	PRK11423, PRK11423, methylmalonyl-CoA decarboxylas	4e-14
PRK05864	276	PRK05864, PRK05864, enoyl-CoA hydratase; Provision	4e-14
PRK05870	249	PRK05870, PRK05870, enoyl-CoA hydratase; Provision	7e-14
PRK08140	262	PRK08140, PRK08140, enoyl-CoA hydratase; Provision	2e-13
PRK08150	255	PRK08150, PRK08150, enoyl-CoA hydratase; Provision	3e-13
PRK06143	256	PRK06143, PRK06143, enoyl-CoA hydratase; Provision	4e-13
PRK07260	255	PRK07260, PRK07260, enoyl-CoA hydratase; Provision	6e-13
PRK06144	262	PRK06144, PRK06144, enoyl-CoA hydratase; Provision	7e-13
PRK08272	302	PRK08272, PRK08272, enoyl-CoA hydratase; Provision	6e-11
PRK06023	251	PRK06023, PRK06023, enoyl-CoA hydratase; Provision	1e-10
PRK07509	262	PRK07509, PRK07509, enoyl-CoA hydratase; Provision	7e-10
PRK07468	262	PRK07468, PRK07468, enoyl-CoA hydratase; Provision	1e-08
PRK08258	277	PRK08258, PRK08258, enoyl-CoA hydratase; Provision	3e-08
TIGR03200	360	TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car	3e-07
TIGR03189	251	TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecar	4e-07
PRK06072	248	PRK06072, PRK06072, enoyl-CoA hydratase; Provision	2e-06
PRK07854	243	PRK07854, PRK07854, enoyl-CoA hydratase; Provision	3e-06
TIGR03222	546	TIGR03222, benzo_boxC, benzoyl-CoA-dihydrodiol lya	5e-06
PRK07827	260	PRK07827, PRK07827, enoyl-CoA hydratase; Provision	1e-05
PRK07110	249	PRK07110, PRK07110, polyketide biosynthesis enoyl-	1e-05
PRK08184	550	PRK08184, PRK08184, benzoyl-CoA-dihydrodiol lyase;	2e-05
PRK07659	260	PRK07659, PRK07659, enoyl-CoA hydratase; Provision	2e-05
PLN03214	278	PLN03214, PLN03214, probable enoyl-CoA hydratase/i	5e-05
PRK12478	298	PRK12478, PRK12478, enoyl-CoA hydratase; Provision	5e-05
PRK05674	265	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr	6e-05
PRK07327	268	PRK07327, PRK07327, enoyl-CoA hydratase; Provision	2e-04
PRK07112	255	PRK07112, PRK07112, polyketide biosynthesis enoyl-	2e-04
PLN02988	381	PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol	0.002
PLN02267	239	PLN02267, PLN02267, enoyl-CoA hydratase/isomerase	0.002

>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional

 Score =  162 bits (413), Expect = 5e-51
 Identities = 62/107 (57%), Positives = 76/107 (71%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDII A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++CLTG   
Sbjct: 106 LGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMM 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++ P +KLL+E +  A  I   S   V   KEAVN
Sbjct: 166 DAAEAERAGLVSRVVPADKLLDEALAAATTIASFSLPAVMMAKEAVN 212

Length = 257

>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family

 Score =  147 bits (374), Expect = 2e-45
 Identities = 56/114 (49%), Positives = 77/114 (67%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ CD   A + AKFG PE+ +G +PGAGGTQRL R  G S A+E+ LTG + 
Sbjct: 102 LGGGLELALACDYRIAADNAKFGLPEVKLGIIPGAGGTQRLPRIIGVSAALEMLLTGRRI 161

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
            AQEA +MG+V K+ P E+L+EE I+LA+R+ +  PL +  +K A+     + L
Sbjct: 162 RAQEALKMGLVDKVVPEEQLVEEAIELAQRLADKPPLALAALKAAMRAALEDAL 215

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245

>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional

 Score =  147 bits (373), Expect = 5e-45
 Identities = 59/107 (55%), Positives = 70/107 (65%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM  DII AGE A FGQPEI +G MPGAGGTQRL RA GK  AM + LTG   
Sbjct: 110 LGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMV 169

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA  +G+VS++   E+ L   ++LA  I    PL + Q+KE V 
Sbjct: 170 PAPEALAIGLVSEVVEDEQTLPRALELAREIARMPPLALAQIKEVVL 216

Length = 261

>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional

 Score =  147 bits (372), Expect = 6e-45
 Identities = 60/106 (56%), Positives = 80/106 (75%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG GCELA++CDI+ AGE A+FG PEI +G MPGAGGTQRL R+ GKS A ++ LTG   
Sbjct: 104 LGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESI 163

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TAQ+A++ G+VS++FPPE  LE  ++LA +I  HSPL +   K+A+
Sbjct: 164 TAQQAQQAGLVSEVFPPELTLERALQLASKIARHSPLALRAAKQAL 209

Length = 255

>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

 Score =  128 bits (324), Expect = 2e-38
 Identities = 47/91 (51%), Positives = 64/91 (70%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ CDI  A E AKFG PE+ +G +PG GGTQRL R  G + A E+ LTG + 
Sbjct: 105 LGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRI 164

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           +A+EA E+G+V ++ P E+LL   ++LA R+
Sbjct: 165 SAEEALELGLVDEVVPDEELLAAALELARRL 195

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195

>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

 Score =  126 bits (318), Expect = 8e-37
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ CDI  A E AKFG PE+ +G +PG GGTQRL R  G+  A E+ LTG   
Sbjct: 110 LGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPI 169

Query: 96  TAQEAKEMGVVSKIFPP-EKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A EA E+G+V ++ P  E+LLE  ++LA R+    PL +   K  V 
Sbjct: 170 SAAEALELGLVDEVVPDAEELLERALELARRLAA-PPLALAATKRLVR 216

Length = 257

>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated

 Score =  118 bits (297), Expect = 1e-33
 Identities = 56/107 (52%), Positives = 73/107 (68%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCEL+M CDI  A EKAKFGQPE+ +G  PG GGTQRL R  G   A E+  TG+  
Sbjct: 109 LGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELIYTGDMI 168

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EA  +G+V+K+  PEKL+EE   LA +I  ++P+ V   K+A+N
Sbjct: 169 NAEEALRIGLVNKVVEPEKLMEEAKALANKIAANAPIAVKLCKDAIN 215

Length = 260

>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional

 Score =  116 bits (294), Expect = 4e-33
 Identities = 37/107 (34%), Positives = 58/107 (54%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  LA+ CD++YA E AKF  P   +G  P AGG+  L R  G++ A E+ L G   
Sbjct: 108 VGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLLGEPL 167

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A+EA  +G+V+++ P  +L  E    A ++       +   K A+N
Sbjct: 168 SAEEALRIGLVNRVVPAAELDAEADAQAAKLAAGPASALRYTKRAIN 214

Length = 259

>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional

 Score =  113 bits (285), Expect = 8e-32
 Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 4/117 (3%)

Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           +  GGGCE+     +  A E+A F +PEI +G  P  GGTQRL R AG+  A+E+ LTG+
Sbjct: 110 LAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGD 169

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
            F+A+ A E+G+V+ + P E+LL     LA RI  HSP+ V  +  AV    T GLN
Sbjct: 170 AFSAERALEIGLVNAVVPHEELLPAARALARRIIRHSPVAVAAILTAV----TRGLN 222

Length = 260

>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional

 Score =  112 bits (281), Expect = 3e-31
 Identities = 51/109 (46%), Positives = 68/109 (62%)

Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I LGGG ELA+ CD   A E A  G  E  +  +PGAGGTQRL R  G   A E+  TG 
Sbjct: 107 IALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGR 166

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           + +AQEAKE+G+V  + P   L E+ I++AE+I  + P+ V Q KEA++
Sbjct: 167 RISAQEAKEIGLVEFVVPAHLLEEKAIEIAEKIASNGPIAVRQAKEAIS 215

Length = 260

>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional

 Score =  107 bits (270), Expect = 1e-29
 Identities = 50/107 (46%), Positives = 66/107 (61%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELAM C I +A E AK G PE+ +G +PG  GTQRL R  GK+ A+E+ LT    
Sbjct: 106 LGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPI 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           T  EA + G+V+ +FP E LL++  KLA++I   SP     V E + 
Sbjct: 166 TGAEALKWGLVNGVFPEETLLDDAKKLAKKIAGKSPATTRAVLELLQ 212

Length = 257

>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional

 Score =  106 bits (267), Expect = 4e-29
 Identities = 46/106 (43%), Positives = 63/106 (59%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           L GG ELA+ CD+I A   AKFG PE+  G +   GG  RL R      AME+ LTG+  
Sbjct: 103 LAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDML 162

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TA+ A E+G+V+++  P + L+  ++LAERI  + PL V   K  V
Sbjct: 163 TAERAHELGLVNRLTEPGQALDAALELAERIAANGPLAVAASKRIV 208

Length = 254

>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional

 Score =  103 bits (259), Expect = 6e-28
 Identities = 45/106 (42%), Positives = 61/106 (57%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG ELA+ CD+I A E A F  PE  +G    AGG  RL R  G   AM + LTG + 
Sbjct: 106 MGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMILTGRRV 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TA+E  E+G V+++ P  +LL    + A+ I   SPL +   K+AV
Sbjct: 166 TAREGLELGFVNEVVPAGELLAAAERWADDILACSPLSIRASKQAV 211

Length = 259

>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase

 Score = 98.7 bits (246), Expect = 4e-26
 Identities = 48/107 (44%), Positives = 68/107 (63%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ CD+   GE+A FG PE  +  +PGAGGTQRL R  G+S A E+  TG + 
Sbjct: 100 LGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRI 159

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EA  MG+V+   P  +  E+ ++LA+ I +  PL +   K+A+N
Sbjct: 160 GAREAASMGLVNYCVPAGEAYEKALELAQEINQKGPLAIKMAKKAIN 206

Length = 251

>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional

 Score = 98.6 bits (246), Expect = 5e-26
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
              GGG ELA+  D I   + A F  PE  +G +P +GG  RL +    + A E+ +TG 
Sbjct: 104 YAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGR 163

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
           +  A+EA   G+V+++ P  +L++   +LA+++   +PL +  +KE     +T  +
Sbjct: 164 RMDAEEALRWGIVNRVVPQAELMDRARELAQQLVNSAPLAIAALKEIYR--ETSEM 217

Length = 261

>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional

 Score = 97.3 bits (243), Expect = 1e-25
 Identities = 40/96 (41%), Positives = 56/96 (58%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G GC+LA MCDI  A E A+F +  + +G +PG GG   L R  G + A E+  TG+  
Sbjct: 115 IGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAI 174

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP 131
            A  A E G+VS++ P ++LL     LAERI  + P
Sbjct: 175 DAATALEWGLVSRVVPADQLLPAARALAERIAANPP 210

Length = 266

>gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional

 Score = 93.9 bits (234), Expect = 3e-24
 Identities = 43/96 (44%), Positives = 59/96 (61%)

Query: 39  GCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ 98
           G EL +  DI+ A +  +F Q E+  G +P  G T R  +AAG  NAM   LTG++F AQ
Sbjct: 107 GIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQ 166

Query: 99  EAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
           EA  +G+V ++ PP + LE  I+LAERI   +PL V
Sbjct: 167 EALRLGLVQEVVPPGEQLERAIELAERIARAAPLGV 202

Length = 255

>gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

 Score = 90.6 bits (225), Expect = 9e-23
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG  L ++CD+  A + A FGQ    +G+  G  G+  L R  G+  A EI     Q+ 
Sbjct: 129 GGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYD 188

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
           A+EA +MG+V+ + P   L +ET++ A  +   SP  +  +K A N  D +GL
Sbjct: 189 AEEALDMGLVNTVVPHADLEKETVQWAREMLAKSPTALRMLKAAFNA-DCDGL 240

Length = 282

>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional

 Score = 87.7 bits (218), Expect = 5e-22
 Identities = 36/102 (35%), Positives = 57/102 (55%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG ELA+ CDI+ A E+A+F      +G +PG G + RL +  G   A  + LTG+   A
Sbjct: 108 GGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDA 167

Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
            +A   G+V+++ P ++LL    +LA  I  ++P  V  +K 
Sbjct: 168 ADALRAGLVTEVVPHDELLPRARRLAASIAGNNPAAVRALKA 209

Length = 258

>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

 Score = 88.0 bits (218), Expect = 7e-22
 Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 1/104 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG ++   CDI Y  E A F   E+ +      G  QRL    G  NAME+ LTG +F
Sbjct: 123 IGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTGRRF 182

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKL-AERIGEHSPLIVTQVK 138
           +  EAKE+G+VS++F  ++ L+E ++L AE I   SPL VT  K
Sbjct: 183 SGSEAKELGLVSRVFGSKEDLDEGVRLIAEGIAAKSPLAVTGTK 226

Length = 275

>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase)

 Score = 86.8 bits (215), Expect = 1e-21
 Identities = 39/110 (35%), Positives = 62/110 (56%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L MMCD+  A E A+FGQ    +G+  G  G+  + R  G+  A EI     Q+
Sbjct: 109 IGGGHVLHMMCDLTIAAENARFGQTGPKVGSFDGGYGSSYMARIVGQKKAREIWFLCRQY 168

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
            A++A +MG+V+ + P   L +ET++    I + SP+ +  +K A+N D 
Sbjct: 169 DAKQALDMGLVNTVVPLADLEKETVRWCREILQKSPMAIRMLKAALNADC 218

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259

>gnl|CDD|183293 PRK11730, fadB, multifunctional fatty acid oxidation complex subunit alpha; Reviewed

 Score = 87.6 bits (218), Expect = 6e-21
 Identities = 37/90 (41%), Positives = 49/90 (54%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCE  +  D   A   A+ G PE  +G MPG GGT RL R  G  NA+E    G   
Sbjct: 114 LGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDV 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
            A++A ++G V  +  PEKL E  + L ++
Sbjct: 174 RAEDALKVGAVDAVVAPEKLQEAALALLKQ 203

Length = 715

>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional

 Score = 84.4 bits (209), Expect = 2e-20
 Identities = 33/106 (31%), Positives = 52/106 (49%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  +A+ CDI  A E ++FG P   +G   G  G + L    G S A ++  T  +F
Sbjct: 118 IGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRF 177

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
            A EA  +G+V ++   + L       A  I  ++PL +   K A+
Sbjct: 178 DAAEALRIGLVHRVTAADDLETALADYAATIAGNAPLTLRAAKRAI 223

Length = 269

>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 6/107 (5%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRA--AGKSNAMEICLTGNQF 95
           GG  LA +CD+I A + A F  P   +  M G  G +        G   A E+  TG++ 
Sbjct: 132 GGLMLAWVCDLIVASDDAFFSDP---VVRM-GIPGVEYFAHPWELGPRKAKELLFTGDRL 187

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA EA  +G+V+++ P ++L  ET++LA RI    P  +   K AVN
Sbjct: 188 TADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTKRAVN 234

Length = 288

>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional

 Score = 84.0 bits (208), Expect = 2e-20
 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 2/112 (1%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG E+    DI  AGE AKFG  E      P  G   RL R    + A ++ LTG   TA
Sbjct: 114 GGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITA 173

Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
            EAKE+G++  + P  + L++ ++LAE I  + PL V  +     I +TEG+
Sbjct: 174 AEAKEIGLIGHVVPDGQALDKALELAELINANGPLAVQAILRT--IRETEGM 223

Length = 263

>gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex subunit alpha; Reviewed

 Score = 85.7 bits (213), Expect = 3e-20
 Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 2/91 (2%)

Query: 36  LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           LGGG ELA+ C   +     K   G PE+ +G +PG+GGTQRL R  G S A+++ LTG 
Sbjct: 113 LGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGK 172

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAE 124
           Q  A++A ++G+V  + P   LLE  ++LA+
Sbjct: 173 QLRAKQALKLGLVDDVVPHSILLEVAVELAK 203

Length = 708

>gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated

 Score = 82.6 bits (205), Expect = 6e-20
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG  L ++CD+  A + A FGQ    +G+  G  G   L R  G+  A EI     Q+ 
Sbjct: 120 GGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYD 179

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
           AQEA +MG+V+ + P   L +ET++    + ++SP+ +  +K A+N  D +G 
Sbjct: 180 AQEALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNA-DCDGQ 231

Length = 273

>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG G  L   CDII A E A FG PEI +G     GG +   R  G S    + LTG + 
Sbjct: 109 LGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRV 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
            A E    GV+    PPE+L+ E +++A  I   SPL     K+A+N  +   L
Sbjct: 166 PAAELYRRGVIEACLPPEELMPEAMEIAREIASKSPLATRLAKDALNTIENMSL 219

Length = 257

>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated

 Score = 80.4 bits (199), Expect = 4e-19
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 39  GCELAMMCDIIYAGEKAKFGQPEIIIG---TMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           GC+L   CD+  A + A+F  P + IG   + P       L+R   +  AME+ LTG   
Sbjct: 119 GCQLVASCDLAVAADTARFAVPGVNIGLFCSTPMVA----LSRNVPRKQAMEMLLTGEFI 174

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA 140
            A  A+E G+V+++ P + L     +LA  I   SP  V   KEA
Sbjct: 175 DAATAREWGLVNRVVPADALDAAVARLAAVIAAKSPAAVRIGKEA 219

Length = 266

>gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ

 Score = 82.2 bits (203), Expect = 5e-19
 Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 2/90 (2%)

Query: 36  LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           LGGG ELA+ C   +    +K   G PE+ +G +PG+GGTQRL R  G S A+++ LTG 
Sbjct: 108 LGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGK 167

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLA 123
           Q  A++A ++G+V  + P   LL+  +++A
Sbjct: 168 QLRAKQALKLGLVDDVVPQSILLDTAVEMA 197

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog model [Fatty acid and phospholipid metabolism, Degradation]. Length = 699

>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional

 Score = 80.4 bits (199), Expect = 5e-19
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 9/123 (7%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG +L   CD+ YA   AKF   E+ +G +   G  QRL R  G  +  E+ LTG   
Sbjct: 121 IGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTGRDI 180

Query: 96  TAQEAKEMGVVSKIFP-PEKLLEETIKLAERIGEHSPLIVTQVKEAVN------IDDTEG 148
            A EA+++G+V++++   + LL      A  I   SPL V   KE ++      + D  G
Sbjct: 181 DAAEAEKIGLVNRVYDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVAD--G 238

Query: 149 LNH 151
           L +
Sbjct: 239 LRY 241

Length = 272

>gnl|CDD|235632 PRK05869, PRK05869, enoyl-CoA hydratase; Validated

 Score = 79.1 bits (195), Expect = 7e-19
 Identities = 36/107 (33%), Positives = 55/107 (51%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG G  LA+  D   +G+  KFG  EI+ G  P   G  RLTRAAG S A E+  +G  F
Sbjct: 111 LGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFF 170

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EA  +G++ ++  P+ + +     A R  +  P  +   K  ++
Sbjct: 171 DAEEALALGLIDEMVAPDDVYDAAAAWARRFLDGPPHALAAAKAGIS 217

Length = 222

>gnl|CDD|236373 PRK09076, PRK09076, enoyl-CoA hydratase; Provisional

 Score = 79.6 bits (197), Expect = 7e-19
 Identities = 36/107 (33%), Positives = 55/107 (51%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG E A+ CDI  A E+A+   PE  +G +P AGGTQ L    G+  A  + L G + 
Sbjct: 107 MGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERV 166

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A  A  +G+V ++    +  E  + LA+++   SP  V   K  + 
Sbjct: 167 DAATALRIGLVEEVVEKGEAREAALALAQKVANQSPSAVAACKTLIQ 213

Length = 258

>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional

 Score = 75.9 bits (187), Expect = 2e-17
 Identities = 32/87 (36%), Positives = 47/87 (54%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G   A+M D+I     A F Q    IG +P  G T  L R  GK+ AME+ L G +  
Sbjct: 116 GVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLP 175

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLA 123
           A+ A + G+V+++    +L+ E +KLA
Sbjct: 176 AETALQWGLVNRVVDDAELMAEAMKLA 202

Length = 266

>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase

 Score = 74.8 bits (184), Expect = 1e-16
 Identities = 37/110 (33%), Positives = 59/110 (53%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L M+CD+  A + A FGQ    +G+     G+  + R  G+  A E+      +
Sbjct: 173 VGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFY 232

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
           TA EA +MG+V+ + P ++L  ET+K    I  +SP  +  +K A+N  D
Sbjct: 233 TASEALKMGLVNTVVPLDELEGETVKWCREILRNSPTAIRVLKSALNAAD 282

Length = 327

>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial

 Score = 74.9 bits (184), Expect = 2e-16
 Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 13/101 (12%)

Query: 36  LGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           LGGG ELA+ C   I     K   G PE+++G +PGAGGTQRL +  G   A+++ LTG 
Sbjct: 120 LGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGK 179

Query: 94  QFTAQEAKEMGVVSKIF--------PPEKLLEETIKLAERI 126
           +  A  AK+MG+V ++         P E   E TI+  E +
Sbjct: 180 KIRADRAKKMGIVDQLVDPLGPGLKPAE---ENTIEYLEEV 217

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737

>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase

 Score = 73.1 bits (179), Expect = 2e-16
 Identities = 41/109 (37%), Positives = 60/109 (55%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L  +CD+  A EKA+FGQ    +G++    GT  L R  G+  A EI     ++
Sbjct: 106 IGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWYLCRRY 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
           TAQEA  MG+V+ + P ++L  E  K  + I E SP  +   K + N+D
Sbjct: 166 TAQEALAMGLVNAVVPHDQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMD 214

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256

>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB

 Score = 74.1 bits (182), Expect = 3e-16
 Identities = 35/90 (38%), Positives = 50/90 (55%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCE  +  D   A + AK G PE  +G MPG GGT RL R  G  NA+E   +G + 
Sbjct: 114 LGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKEN 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
            A++A ++G V  +   +KL    ++L + 
Sbjct: 174 RAEDALKVGAVDAVVTADKLGAAALQLLKD 203

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714

>gnl|CDD|236338 PRK08788, PRK08788, enoyl-CoA hydratase; Validated

 Score = 72.3 bits (178), Expect = 6e-16
 Identities = 30/77 (38%), Positives = 39/77 (50%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E A+    I A   AK G PEI+    PG G    L R  G   A E+ L+G  +
Sbjct: 133 LGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELILSGKLY 192

Query: 96  TAQEAKEMGVVSKIFPP 112
           TA+E  +MG+V  +   
Sbjct: 193 TAEELHDMGLVDVLVED 209

Length = 287

>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase

 Score = 70.6 bits (173), Expect = 2e-15
 Identities = 34/105 (32%), Positives = 58/105 (55%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
            G E+A+ CDI+ A   AKF       G  P  G +Q+L+R  G + A E+ LT    TA
Sbjct: 113 AGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTA 172

Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           + A+  G+V+ +    +LL++  ++AE I +++  +V + K  +N
Sbjct: 173 ETAERWGLVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVIN 217

Length = 265

>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             GG  L   CDI  A + A F   E+ +G +P A  +  + RA G+  A    LT  +F
Sbjct: 111 YAGGMGLVAACDIAVAADHAVFCLSEVRLGLIP-ATISPYVIRAMGERAARRYFLTAERF 169

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
            A EA  +G+V ++ P E L  +  +L   +  +SP  V   K  V
Sbjct: 170 DAAEALRLGLVHEVVPAEALDAKVDELLAALVANSPQAVRAGKRLV 215

Length = 262

>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional

 Score = 70.0 bits (172), Expect = 2e-15
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 14/116 (12%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRL-----TRAAGKSNAMEICL 90
           LGGG  L    D+I A + A FG PE+  G +  A   QRL      RA        +  
Sbjct: 106 LGGGIGLVGNADVIVASDDATFGLPEVDRGALGAATHLQRLVPQHLMRA--------LFF 157

Query: 91  TGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN-IDD 145
           T    TA E    G V ++ P ++L E  +++A +I      ++   KEA+N ID 
Sbjct: 158 TAATITAAELHHFGSVEEVVPRDQLDEAALEVARKIAAKDTRVIRAAKEALNGIDP 213

Length = 249

>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB

 Score = 69.9 bits (171), Expect = 3e-15
 Identities = 35/114 (30%), Positives = 56/114 (49%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G  LA+ CDI+ A E A+F Q    IG +P +GGT  L R  G++ AM + + G +  
Sbjct: 106 GAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLD 165

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
           A+ A   G++ ++     L++E   LA  +       +   K A+    T  L+
Sbjct: 166 ARTAASWGLIWQVVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLD 219

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256

>gnl|CDD|181386 PRK08321, PRK08321, naphthoate synthase; Validated

 Score = 69.7 bits (171), Expect = 7e-15
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 37  GGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           GGG  L ++CD+  A  E A+F Q +  +G+  G  G+  L R  G+  A EI   G  +
Sbjct: 148 GGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTY 207

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
           +A+EA +MG V+ + P  +L  E ++ A  I   SP  +  +K A N+ D +GL
Sbjct: 208 SAEEAHDMGAVNAVVPHAELETEALEWAREINGKSPTAMRMLKYAFNLTD-DGL 260

Length = 302

>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional

 Score = 68.9 bits (169), Expect = 8e-15
 Identities = 33/106 (31%), Positives = 56/106 (52%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G  LA+ CD++ A   AKF    + +G  P  GG+  L RA  +  A E+ L G   +
Sbjct: 111 GAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPIS 170

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           A+    +GVV+++  P + L E + LA+++   SP  + ++K  + 
Sbjct: 171 AERLHALGVVNRLAEPGQALAEALALADQLAAGSPNALARIKSLIA 216

Length = 260

>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional

 Score = 69.0 bits (169), Expect = 8e-15
 Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G   A+MCD+ +A + AKF       G +   G +  L R  G +NA+++ L+   F 
Sbjct: 121 GIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFY 180

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH-SP 131
           A+EA  +G+V+++ PP++L+E T+  AE +  + SP
Sbjct: 181 AEEALRLGLVNRVVPPDELMERTLAYAEDLARNVSP 216

Length = 272

>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 34/105 (32%), Positives = 59/105 (56%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG    + CD+  A ++A+FG  EI  G  PG G ++ +    G  +A+   +TG  FT
Sbjct: 117 GGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFT 176

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
            ++A EMG+V++  P  +L   T +LA ++ E +P+++   K+  
Sbjct: 177 GRKAAEMGLVNESVPLAQLRARTRELAAKLLEKNPVVLRAAKDGF 221

Length = 275

>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional

 Score = 67.7 bits (166), Expect = 3e-14
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 42  LAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAK 101
           LAM  DI  A   A+FG      G +P A  +  L R  G   A+E   +G  F AQEA 
Sbjct: 133 LAM--DIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWVYSGRVFDAQEAL 190

Query: 102 EMGVVSKIFPPEKLLEETIKLAERIGEH-SPLIV 134
           + G+V  + PP++LL     LA  I ++ SP+ V
Sbjct: 191 DGGLVRSVHPPDELLPAARALAREIADNTSPVSV 224

Length = 296

>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 14/96 (14%)

Query: 38  GGCELAMMCDIIYAGEKA-------KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICL 90
           GG ELA+ CD+  A E A       ++G P I        GGT RL R  G S AM++ L
Sbjct: 107 GGLELALWCDLRVAEEDAVFGVFCRRWGVPLI-------DGGTVRLPRLIGHSRAMDLIL 159

Query: 91  TGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           TG    A EA  +G+ +++ P  +      +LA  +
Sbjct: 160 TGRPVDADEALAIGLANRVVPKGQARAAAEELAAEL 195

Length = 254

>gnl|CDD|236908 PRK11423, PRK11423, methylmalonyl-CoA decarboxylase; Provisional

 Score = 67.0 bits (164), Expect = 4e-14
 Identities = 32/107 (29%), Positives = 52/107 (48%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GG  EL M CD+I A   + F      +G      G    T  AG     E+  T +  T
Sbjct: 109 GGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPIT 168

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI 143
           AQ A  +G+++ +   E+L + T+++A  I E +PL +  +KE + +
Sbjct: 169 AQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEQLRV 215

Length = 261

>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional

 Score = 67.2 bits (164), Expect = 4e-14
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIG-TMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
           +GGG  LA+  DI  A   A F    I  G T    G +  L RA G S A EI LTG  
Sbjct: 121 IGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRD 180

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS 130
             A+EA+ +G+VS+  P E+LL+    +A R+   S
Sbjct: 181 VDAEEAERIGLVSRQVPDEQLLDTCYAIAARMAGFS 216

Length = 276

>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional

 Score = 66.3 bits (162), Expect = 7e-14
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G  LA+  D+  AG KA F      +G  PG G T  L RA G   A    L G +F 
Sbjct: 108 GAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFD 167

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           A+ A   G+   +   +  +   ++LA         +V   K ++
Sbjct: 168 AEAAVRHGLALMV--ADDPVAAALELAAGPAAAPRELVLATKASM 210

Length = 249

>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 33/106 (31%), Positives = 58/106 (54%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G  LA+ CDI+ A   A F Q  + IG +P +GGT  L R  G + A+ + L G + +
Sbjct: 112 GAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLS 171

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           A++A++ G++ ++     L +E  +LA  +       +  +K+A+N
Sbjct: 172 AEQAEQWGLIWRVVDDAALADEAQQLAAHLATQPTRGLALIKQAMN 217

Length = 262

>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 34/96 (35%), Positives = 52/96 (54%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG ELA    I  A E   F  PE   G   G GG+ R+ R  G +   ++ LTG  + 
Sbjct: 105 GGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYD 164

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPL 132
           AQE + +G+   + P  + L++ ++LA RI +++PL
Sbjct: 165 AQEGERLGLAQYLVPAGEALDKAMELARRIAQNAPL 200

Length = 255

>gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional

 Score = 64.3 bits (157), Expect = 4e-13
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA  CD+  A   A+FG PE+ +G +P       L R  G +    + LTG   
Sbjct: 112 LGGGLELAAACDLRIAAHDAQFGMPEVRVG-IPSVIHAALLPRLIGWARTRWLLLTGETI 170

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
            A +A   G+V ++ P  +L     +LA  +    P  + Q K
Sbjct: 171 DAAQALAWGLVDRVVPLAELDAAVERLAASLAGCGPQALRQQK 213

Length = 256

>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional

 Score = 63.6 bits (155), Expect = 6e-13
 Identities = 32/94 (34%), Positives = 48/94 (51%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G    +A+  D   A  K KF Q  + +G  P AGG   LTRA G + A  + +TG   T
Sbjct: 111 GAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALT 170

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS 130
           A++A E G V ++   EKL +   +L +++   S
Sbjct: 171 AEKALEYGFVYRVAESEKLEKTCEQLLKKLRRGS 204

Length = 255

>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional

 Score = 63.5 bits (155), Expect = 7e-13
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEII---IGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           GGG  +A  CD+  A   A+FG P  I   +G         RL    G +   ++  T  
Sbjct: 115 GGGAAIAAACDLRIATPSARFGFP--IARTLGNCLSMSNLARLVALLGAARVKDMLFTAR 172

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
              A+EA   G+V+++     L      LAE +  H+PL +   KEA+ 
Sbjct: 173 LLEAEEALAAGLVNEVVEDAALDARADALAELLAAHAPLTLRATKEALR 221

Length = 262

>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional

 Score = 58.5 bits (142), Expect = 6e-11
 Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEI-IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
           + GG ++A+ CD + A + AK G P   + G         RL    G   A  +  TG+ 
Sbjct: 139 VAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPATGMWAYRL----GPQRAKRLLFTGDC 194

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            T  +A E G+  +  PPE+L E T +L ERI       +  VK AVN
Sbjct: 195 ITGAQAAEWGLAVEAVPPEELDERTERLVERIAAVPVNQLAMVKLAVN 242

Length = 302

>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional

 Score = 57.5 bits (139), Expect = 1e-10
 Identities = 28/96 (29%), Positives = 48/96 (50%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  + + CD+ +A  ++ F  P + +  +P AG +    R  G   A  +   G  F
Sbjct: 109 IGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGF 168

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP 131
           +A+ A+E G++ KI   E +  ET+K AE +    P
Sbjct: 169 SAEAAQEAGLIWKIVDEEAVEAETLKAAEELAAKPP 204

Length = 251

>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional

 Score = 55.3 bits (134), Expect = 7e-10
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG ++A+  DI  A    K    E   G +P   GT  L     K  A E+  T   F+
Sbjct: 115 GGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVFS 174

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP 131
           A+EA E+G+V+ +   +  L   + LA  I + SP
Sbjct: 175 AEEALELGLVTHV--SDDPLAAALALAREIAQRSP 207

Length = 262

>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG  L  +CD+  A   A+FG  E  +G +P       + R  G++NA  + ++   F 
Sbjct: 113 GGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEANARRVFMSARLFD 171

Query: 97  AQEAKEMGVVSKIFPPEKL 115
           A+EA  +G++S++ P E+L
Sbjct: 172 AEEAVRLGLLSRVVPAERL 190

Length = 262

>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGA--GGTQRLTRAAGKSNAMEICLTGNQ 94
           G G  LAM  D+      AK       +G + GA  G    L R  G+  A E+  TG  
Sbjct: 126 GAGAILAMASDLRLGTPSAKTAFLFTRVG-LAGADMGACALLPRIIGQGRASELLYTGRS 184

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
            +A+E +  G  +++  PE+LL E   LA R+  
Sbjct: 185 MSAEEGERWGFFNRLVEPEELLAEAQALARRLAA 218

Length = 277

>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG E+ M  D   A + A FGQ     G+ P  G T  L    G   AM        +
Sbjct: 136 IGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPW 195

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVT 135
           +A +AK +G++  + P  K+  + +         +PL+VT
Sbjct: 196 SAHKAKRLGIIMDVVPALKVDGKFVA--------NPLVVT 227

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360

>gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA hydratase

 Score = 47.6 bits (113), Expect = 4e-07
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E+A   ++++A   AK GQPEI++G    A     L    G+  A ++  +G   
Sbjct: 101 LGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPAASCL-LPERMGRVAAEDLLYSGRSI 159

Query: 96  TAQEAKEMGVVSKI 109
              E   +G+ + +
Sbjct: 160 DGAEGARIGLANAV 173

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. Length = 251

>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional

 Score = 45.2 bits (107), Expect = 2e-06
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G    +A+  D  +A    KF      +G     G    L +  G     EI + G +FT
Sbjct: 102 GACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTG-QRFYEILVLGGEFT 160

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           A+EA+  G++ KI   E  L +  ++A RI
Sbjct: 161 AEEAERWGLL-KI--SEDPLSDAEEMANRI 187

Length = 248

>gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G +LAM CD+     +A F  P    G        +RL+   G   A  + L   + 
Sbjct: 98  IGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKL 157

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT 146
           TA++A   G+ ++I      L +    A  I   +PL +   K  +N D  
Sbjct: 158 TAEQALATGMANRIGT----LADAQAWAAEIAGLAPLALQHAKRVLNDDGA 204

Length = 243

>gnl|CDD|213787 TIGR03222, benzo_boxC, benzoyl-CoA-dihydrodiol lyase

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)

Query: 37  GGGCELAMMCDIIYAGE--KAKFGQPEI-IIGTMPGAGGTQRLT--RAAGKSNAMEICLT 91
           GGG ELA+ CD I   +   +    PE+ ++G +PG GG  R+T  R   + +A   C  
Sbjct: 132 GGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTI 191

Query: 92  GNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP 131
                 + AKE  +V ++  P +      + A  +   S 
Sbjct: 192 EEGVRGKRAKEWRLVDEVVKPSQFDAAIAERAAELAAQSD 231

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH. Length = 546

>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
            GG  L   CDI+ AG ++ F   E  IG  P       L R + ++ A    LTG +F 
Sbjct: 114 AGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRA-AARYYLTGEKFG 172

Query: 97  AQEAKEMGVVS 107
           A EA  +G+V+
Sbjct: 173 AAEAARIGLVT 183

Length = 260

>gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 26/92 (28%), Positives = 43/92 (46%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG  L +  DI+    ++ +    +  G  PG G T  L    G +   E+ LT   + 
Sbjct: 107 GGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLLTARYYR 166

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
             E K+ GV   + P  ++LE+ ++LA  + E
Sbjct: 167 GAELKKRGVPFPVLPRAEVLEKALELARSLAE 198

Length = 249

>gnl|CDD|181274 PRK08184, PRK08184, benzoyl-CoA-dihydrodiol lyase; Provisional

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 37  GGGCELAMMCDIIYAGE--KAKFGQPEI-IIGTMPGAGGTQRLT--RAAGKSNAMEICLT 91
           GGG ELA+ CD I   +   +    PE+ ++G +PG GG  R+T  R   +  A   C  
Sbjct: 136 GGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDLADIFCTI 195

Query: 92  GNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP 131
                 + A +  +V ++  P K   +  + A  +   S 
Sbjct: 196 EEGVRGKRAVDWRLVDEVVKPSKFDAKVAERAAELAAASD 235

Length = 550

>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 22/74 (29%), Positives = 38/74 (51%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           G G  +A+  D + A   AK     I IG +P  GG   L +  G++ A +I   G + +
Sbjct: 111 GLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLS 170

Query: 97  AQEAKEMGVVSKIF 110
           A EA ++G++ ++ 
Sbjct: 171 ATEALDLGLIDEVI 184

Length = 260

>gnl|CDD|215635 PLN03214, PLN03214, probable enoyl-CoA hydratase/isomerase; Provisional

 Score = 41.4 bits (97), Expect = 5e-05
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGT-MPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGC +++ CD      +   G  E+ +G  +P       + R   +  A  + L G    
Sbjct: 121 GGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVR 180

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAER 125
             EAK++G++ ++ P   L+E      ER
Sbjct: 181 PAEAKQLGLIDEVVPAAALMEAAASAMER 209

Length = 278

>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 18/125 (14%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGT----QRLTRAAGKSNAMEICLT 91
           +GG  + A+  DI+ A + A  G P      M GA  T     RL+ A  K ++    LT
Sbjct: 124 VGGASDYALCADIVIASDDAVIGTP---YSRMWGAYLTGMWLYRLSLAKVKWHS----LT 176

Query: 92  GNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIG-------EHSPLIVTQVKEAVNID 144
           G   T  +A E  ++++  P E+L     ++A  +        +   LIV Q  E + + 
Sbjct: 177 GRPLTGVQAAEAELINEAVPFERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLA 236

Query: 145 DTEGL 149
            T+ L
Sbjct: 237 STQTL 241

Length = 298

>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated

 Score = 41.3 bits (97), Expect = 6e-05
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GG   L   CD+    + A+F   E+ IG  P A  +  + +A G+  A    LT  +F 
Sbjct: 114 GGALGLISCCDMAIGADDAQFCLSEVRIGLAP-AVISPFVVKAIGERAARRYALTAERFD 172

Query: 97  AQEAKEMGVVSKIFPPEKL 115
            + A+E+G++++ +P  +L
Sbjct: 173 GRRARELGLLAESYPAAEL 191

Length = 265

>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 28/120 (23%)

Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEIC------- 89
           G G   A++ DI  A + A+               G  RL  AAG   A  I        
Sbjct: 119 GAGLVAALLADISIAAKDARI------------IDGHTRLGVAAGDHAA--IVWPLLCGM 164

Query: 90  -------LTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
                  L     + +EA+ +G+VS     ++LL + +++AER+   S   +   K A+N
Sbjct: 165 AKAKYYLLLCEPVSGEEAERIGLVSLAVDDDELLPKALEVAERLAAGSQTAIRWTKYALN 224

Length = 268

>gnl|CDD|235938 PRK07112, PRK07112, polyketide biosynthesis enoyl-CoA hydratase; Validated

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG       DI+ A E A F   E++ G +P A     L R  G   A  + L     TA
Sbjct: 110 GGIGFVAASDIVIADETAPFSLSELLFGLIP-ACVLPFLIRRIGTQKAHYMTLMTQPVTA 168

Query: 98  QEAKEMGVVSKIFP-PEKLL 116
           Q+A   G+V       + LL
Sbjct: 169 QQAFSWGLVDAYGANSDTLL 188

Length = 255

>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 2/107 (1%)

Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I +GGG  +++      A E   F  PE  +G  P  G +  L+R  G      + LTG 
Sbjct: 115 IVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEY-VGLTGA 173

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA 140
           +    E    G+ +   P  +L      L  RIG + P   + + +A
Sbjct: 174 RLDGAEMLACGLATHFVPSTRLTALEADLC-RIGSNDPTFASTILDA 219

Length = 381

>gnl|CDD|215151 PLN02267, PLN02267, enoyl-CoA hydratase/isomerase family protein

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 87  EICLTGNQFTAQEAKEMGVVSKIFP-PEKLLEETIKLAERI 126
           ++ L   + TA+EA EMG+V       E+ +E  ++L E +
Sbjct: 159 DVLLRAAKLTAEEAVEMGIVDSAHDSAEETVEAAVRLGEEL 199

Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
KOG1680|consensus	290		100.0
PRK08150	255	enoyl-CoA hydratase; Provisional	100.0
PRK09076	258	enoyl-CoA hydratase; Provisional	100.0
PRK06143	256	enoyl-CoA hydratase; Provisional	100.0
PLN02600	251	enoyl-CoA hydratase	100.0
PRK05862	257	enoyl-CoA hydratase; Provisional	100.0
PRK06494	259	enoyl-CoA hydratase; Provisional	100.0
PRK08252	254	enoyl-CoA hydratase; Provisional	100.0
PRK05980	260	enoyl-CoA hydratase; Provisional	100.0
PRK05869	222	enoyl-CoA hydratase; Validated	100.0
PRK06190	258	enoyl-CoA hydratase; Provisional	99.98
PRK07657	260	enoyl-CoA hydratase; Provisional	99.98
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	99.98
PRK06563	255	enoyl-CoA hydratase; Provisional	99.98
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	99.98
PRK03580	261	carnitinyl-CoA dehydratase; Provisional	99.98
PRK07658	257	enoyl-CoA hydratase; Provisional	99.98
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	99.98
PRK09120	275	p-hydroxycinnamoyl CoA hydratase/lyase; Validated	99.98
PRK08138	261	enoyl-CoA hydratase; Provisional	99.98
PRK06144	262	enoyl-CoA hydratase; Provisional	99.98
PRK06127	269	enoyl-CoA hydratase; Provisional	99.98
TIGR03210	256	badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb	99.98
PRK08259	254	enoyl-CoA hydratase; Provisional	99.98
PLN02888	265	enoyl-CoA hydratase	99.98
PRK09245	266	enoyl-CoA hydratase; Provisional	99.98
PRK07260	255	enoyl-CoA hydratase; Provisional	99.98
PRK07799	263	enoyl-CoA hydratase; Provisional	99.98
TIGR01929	259	menB naphthoate synthase (dihydroxynaphthoic acid	99.97
PRK06142	272	enoyl-CoA hydratase; Provisional	99.97
PRK08140	262	enoyl-CoA hydratase; Provisional	99.97
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	99.97
PRK08139	266	enoyl-CoA hydratase; Validated	99.97
PF00378	245	ECH: Enoyl-CoA hydratase/isomerase family; InterPr	99.97
PRK07659	260	enoyl-CoA hydratase; Provisional	99.97
PRK07511	260	enoyl-CoA hydratase; Provisional	99.97
PRK05674	265	gamma-carboxygeranoyl-CoA hydratase; Validated	99.97
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	99.97
PRK06688	259	enoyl-CoA hydratase; Provisional	99.97
PRK06023	251	enoyl-CoA hydratase; Provisional	99.97
PRK07327	268	enoyl-CoA hydratase; Provisional	99.97
PRK05995	262	enoyl-CoA hydratase; Provisional	99.97
PRK08258	277	enoyl-CoA hydratase; Provisional	99.97
PRK11423	261	methylmalonyl-CoA decarboxylase; Provisional	99.97
PRK07396	273	dihydroxynaphthoic acid synthetase; Validated	99.97
PRK05870	249	enoyl-CoA hydratase; Provisional	99.97
PRK05981	266	enoyl-CoA hydratase; Provisional	99.97
PLN03214	278	probable enoyl-CoA hydratase/isomerase; Provisiona	99.97
PRK06210	272	enoyl-CoA hydratase; Provisional	99.97
PRK06213	229	enoyl-CoA hydratase; Provisional	99.97
PRK08260	296	enoyl-CoA hydratase; Provisional	99.97
PRK05864	276	enoyl-CoA hydratase; Provisional	99.97
PRK07468	262	enoyl-CoA hydratase; Provisional	99.97
PLN02921	327	naphthoate synthase	99.97
PRK07938	249	enoyl-CoA hydratase; Provisional	99.97
PRK06495	257	enoyl-CoA hydratase; Provisional	99.97
TIGR03189	251	dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy	99.97
COG1024	257	CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi	99.97
PRK08321	302	naphthoate synthase; Validated	99.97
PRK07509	262	enoyl-CoA hydratase; Provisional	99.97
PRK08788	287	enoyl-CoA hydratase; Validated	99.96
PRK06072	248	enoyl-CoA hydratase; Provisional	99.96
PRK07854	243	enoyl-CoA hydratase; Provisional	99.96
PRK08290	288	enoyl-CoA hydratase; Provisional	99.96
PRK05617	342	3-hydroxyisobutyryl-CoA hydrolase; Provisional	99.96
PRK08272	302	enoyl-CoA hydratase; Provisional	99.96
PRK07827	260	enoyl-CoA hydratase; Provisional	99.96
PRK07112	255	polyketide biosynthesis enoyl-CoA hydratase; Valid	99.96
KOG1679|consensus	291		99.95
PLN02874	379	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.95
PRK12478	298	enoyl-CoA hydratase; Provisional	99.95
PLN02267	239	enoyl-CoA hydratase/isomerase family protein	99.95
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.95
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.95
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.95
TIGR03200	360	dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy	99.95
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	99.94
PRK11730	715	fadB multifunctional fatty acid oxidation complex	99.94
PLN02988	381	3-hydroxyisobutyryl-CoA hydrolase	99.94
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	99.94
KOG0016|consensus	266		99.93
KOG1681|consensus	292		99.92
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	99.91
cd06558	195	crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy	99.91
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	99.91
PLN02851	407	3-hydroxyisobutyryl-CoA hydrolase-like protein	99.91
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	99.91
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	99.91
KOG1682|consensus	287		99.87
COG0447	282	MenB Dihydroxynaphthoic acid synthase [Coenzyme me	99.83
KOG1684|consensus	401		99.75
cd07020	187	Clp_protease_NfeD_1 Nodulation formation efficienc	99.52
cd07014	177	S49_SppA Signal peptide peptidase A. Signal peptid	99.37
cd07016	160	S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-	99.14
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	98.68
cd00394	161	Clp_protease_like Caseinolytic protease (ClpP) is	98.62
cd07021	178	Clp_protease_NfeD_like Nodulation formation effici	98.35
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	98.3
TIGR00706	207	SppA_dom signal peptide peptidase SppA, 36K type.	98.19
cd07023	208	S49_Sppa_N_C Signal peptide peptidase A (SppA), a	98.08
cd07022	214	S49_Sppa_36K_type Signal peptide peptidase A (SppA	97.96
cd07015	172	Clp_protease_NfeD Nodulation formation efficiency	97.94
PRK00277	200	clpP ATP-dependent Clp protease proteolytic subuni	97.89
CHL00198	322	accA acetyl-CoA carboxylase carboxyltransferase al	97.75
PRK12553	207	ATP-dependent Clp protease proteolytic subunit; Re	97.73
cd07013	162	S14_ClpP Caseinolytic protease (ClpP) is an ATP-de	97.63
PRK12319	256	acetyl-CoA carboxylase subunit alpha; Provisional	97.63
PLN03230	431	acetyl-coenzyme A carboxylase carboxyl transferase	97.61
PRK14512	197	ATP-dependent Clp protease proteolytic subunit; Pr	97.58
CHL00028	200	clpP ATP-dependent Clp protease proteolytic subuni	97.56
PLN03229	762	acetyl-coenzyme A carboxylase carboxyl transferase	97.47
TIGR00493	191	clpP ATP-dependent Clp protease, proteolytic subun	97.41
cd07018	222	S49_SppA_67K_type Signal peptide peptidase A (SppA	97.38
PF00574	182	CLP_protease: Clp protease; InterPro: IPR001907 In	97.36
cd07017	171	S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-	97.31
PRK14514	221	ATP-dependent Clp protease proteolytic subunit; Pr	97.2
PRK14513	201	ATP-dependent Clp protease proteolytic subunit; Pr	97.18
TIGR00513	316	accA acetyl-CoA carboxylase, carboxyl transferase,	97.12
PRK05724	319	acetyl-CoA carboxylase carboxyltransferase subunit	97.09
PRK12551	196	ATP-dependent Clp protease proteolytic subunit; Re	96.95
PRK12552	222	ATP-dependent Clp protease-like protein; Reviewed	96.29
TIGR03133	274	malonate_beta malonate decarboxylase, beta subunit	96.04
PF01343	154	Peptidase_S49: Peptidase family S49 peptidase clas	95.96
PRK05654	292	acetyl-CoA carboxylase subunit beta; Validated	95.96
PF01972	285	SDH_sah: Serine dehydrogenase proteinase; InterPro	95.85
TIGR00515	285	accD acetyl-CoA carboxylase, carboxyl transferase,	95.59
PRK11778	330	putative inner membrane peptidase; Provisional	95.49
PRK10949	618	protease 4; Provisional	95.37
CHL00174	296	accD acetyl-CoA carboxylase beta subunit; Reviewed	95.02
COG0825	317	AccA Acetyl-CoA carboxylase alpha subunit [Lipid m	94.88
COG0740	200	ClpP Protease subunit of ATP-dependent Clp proteas	94.81
COG0616	317	SppA Periplasmic serine proteases (ClpP class) [Po	94.7
TIGR03134	238	malonate_gamma malonate decarboxylase, gamma subun	94.14
PRK07189	301	malonate decarboxylase subunit beta; Reviewed	93.97
PF01039	493	Carboxyl_trans: Carboxyl transferase domain; Inter	93.91
KOG1683|consensus	380		93.85
COG1030	436	NfeD Membrane-bound serine protease (ClpP class) [	92.14
KOG0840|consensus	275		91.86
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	90.36
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	89.96
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	85.29
smart00250	38	PLEC Plectin repeat.	84.22
COG0777	294	AccD Acetyl-CoA carboxylase beta subunit [Lipid me	83.83
PLN02820	569	3-methylcrotonyl-CoA carboxylase, beta chain	83.28
COG4799	526	Acetyl-CoA carboxylase, carboxyltransferase compon	80.92
PF00681	45	Plectin: Plectin repeat; InterPro: IPR001101 Plect	80.18

>KOG1680|consensus

Probab=100.00  E-value=4e-34  Score=218.72  Aligned_cols=143  Identities=49%  Similarity=0.727  Sum_probs=130.7

Q ss_pred             ccccccCCCCCCcchhhhhhhchhhh-----hhhh----------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           4 FEKLFILIDYEQKDLYRSKNLKFIQC-----LKIW----------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         4 ~~k~Fs~~~caG~Dl~~~~~~~~~~~-----~~~~----------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      .+|.||    +|.||+++......+.     ...|                +|+|||++|++.||+|||+++++|++|+.
T Consensus        90 ~gksFc----sG~Dl~e~~~~~~~~~~~~~~~~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~  165 (290)
T KOG1680|consen   90 SGKSFC----SGADLKEMKKDEFQDVSDGIFLRVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEI  165 (290)
T ss_pred             CCCccc----cccCHHHHhhccccccccccccchhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeeccccc
Confidence            468999    9999999987554433     1111                99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|.+|++.+|++.+|.++|++++++|++++++||.++||||+|+|.+++..++.++++.|++.||.+++..|+.+|
T Consensus       166 ~~Gi~p~~GGT~rl~r~vG~s~Ale~~ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn  245 (290)
T KOG1680|consen  166 RMGIIPSWGGTQRLPRIVGKSRALEMILTGRRLGAQEAKKIGLVNKVVPSGDALGEAVKLAEQIAKNSPLVVRADKESVN  245 (290)
T ss_pred             ccCCccCCCchhhHHHHhChHHHHHHHHhcCcccHHHHHhCCceeEeecchhHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q psy9281         143 IDDTEGLN  150 (152)
Q Consensus       143 ~~~~~~l~  150 (152)
                      ..++..+.
T Consensus       246 ~~~e~~l~  253 (290)
T KOG1680|consen  246 AAYETTLF  253 (290)
T ss_pred             HHhhccHH
Confidence            87766543

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.7e-33  Score=214.39  Aligned_cols=140  Identities=28%  Similarity=0.399  Sum_probs=124.8

Q ss_pred             ccccCCCCCCcchhhhhhhchhh------h----hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ------C----LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~------~----~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      ++||    +|+||+++.......      .    +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        55 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~  130 (255)
T PRK08150         55 DHFC----AGLDLSELRERDAGEGMHHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEG  130 (255)
T ss_pred             Ccee----cCcCHHHHhhccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEecccc
Confidence            6899    999999875421110      0    1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|++++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++
T Consensus       131 ~~Gl~p~~g~~~~l~~~iG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~  210 (255)
T PRK08150        131 QRGIFVGGGGSVRVPRLIGVARMTDMMLTGRVYDAQEGERLGLAQYLVPAGEALDKAMELARRIAQNAPLTNFAVLNALP  210 (255)
T ss_pred             ccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCC
Q psy9281         143 IDDTEGL  149 (152)
Q Consensus       143 ~~~~~~l  149 (152)
                      .....++
T Consensus       211 ~~~~~~~  217 (255)
T PRK08150        211 RIADMSA  217 (255)
T ss_pred             HhccCCH
Confidence            7655443

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.1e-32  Score=213.69  Aligned_cols=140  Identities=29%  Similarity=0.444  Sum_probs=124.6

Q ss_pred             cccccCCCCCCcchhhhhhhchh---hh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI---QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~---~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +|+||    +|+||+++.+....   ..       +..+             +|+|||++|+++||+||++++++|++||
T Consensus        57 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  132 (258)
T PRK09076         57 EKFFS----AGADLNLFADGDKAVAREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPE  132 (258)
T ss_pred             CCceE----eCcCHHHHhhcChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcc
Confidence            36899    99999987542111   00       1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+++++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+++
T Consensus       133 ~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l  212 (258)
T PRK09076        133 ASVGLLPCAGGTQNLPWLVGEGWAKRMILCGERVDAATALRIGLVEEVVEKGEAREAALALAQKVANQSPSAVAACKTLI  212 (258)
T ss_pred             cccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCceecCchhHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCC
Q psy9281         142 NIDDTEG  148 (152)
Q Consensus       142 ~~~~~~~  148 (152)
                      +.....+
T Consensus       213 ~~~~~~~  219 (258)
T PRK09076        213 QAARNGP  219 (258)
T ss_pred             HHHhcCC
Confidence            8765443

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.4e-32  Score=212.99  Aligned_cols=140  Identities=29%  Similarity=0.398  Sum_probs=123.4

Q ss_pred             cccccCCCCCCcchhhhhhhchhh---h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ---C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~---~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +|+||    +|+||+++.+.....   .       +..+             +|+|||++|+++||+||++++++|++||
T Consensus        62 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  137 (256)
T PRK06143         62 EKAFI----GGADIKEMATLDQASAEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPE  137 (256)
T ss_pred             CCccc----CCcCHHHHhhcChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCc
Confidence            36899    999999875421111   0       1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|+ |+.++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       138 ~~~G~-p~~~~~~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  216 (256)
T PRK06143        138 VRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVVPLAELDAAVERLAASLAGCGPQALRQQKRLL  216 (256)
T ss_pred             cccCC-CCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCcCeecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99998 77888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       217 ~~~~~~~l  224 (256)
T PRK06143        217 REWEDMPL  224 (256)
T ss_pred             HHHccCCH
Confidence            87655443

>PLN02600 enoyl-CoA hydratase

Probab=100.00  E-value=1.5e-32  Score=212.22  Aligned_cols=141  Identities=36%  Similarity=0.603  Sum_probs=125.3

Q ss_pred             cccccCCCCCCcchhhhhhhchhh---h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ---C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~---~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      .|+||    +|+||+++.+.....   .       +..+             +|+|||++|+++||+||++++++|++||
T Consensus        50 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe  125 (251)
T PLN02600         50 PGVFC----AGADLKERRKMSPSEVQKFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPE  125 (251)
T ss_pred             CCcee----eCcCHHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcc
Confidence            47899    999999875421111   0       1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+.+
T Consensus       126 ~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~la~~~p~a~~~~K~~l  205 (251)
T PLN02600        126 TGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCVPAGEAYEKALELAQEINQKGPLAIKMAKKAI  205 (251)
T ss_pred             cccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       206 ~~~~~~~~  213 (251)
T PLN02600        206 NEGSEVDM  213 (251)
T ss_pred             HHHccCCH
Confidence            87655443

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-32  Score=212.58  Aligned_cols=141  Identities=49%  Similarity=0.781  Sum_probs=125.7

Q ss_pred             cccccCCCCCCcchhhhhhhchhh-----h---hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ-----C---LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~-----~---~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++.+....+     .   +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        58 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  133 (257)
T PRK05862         58 EKAFA----AGADIKEMADLSFMDVYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIK  133 (257)
T ss_pred             CCceE----CCcChHhHhccchhHHHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhc
Confidence            36899    999999875432111     1   1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+++++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       134 ~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~  213 (257)
T PRK05862        134 LGVLPGMGGSQRLTRAVGKAKAMDLCLTGRMMDAAEAERAGLVSRVVPADKLLDEALAAATTIASFSLPAVMMAKEAVNR  213 (257)
T ss_pred             cCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCCEeeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       214 ~~~~~l  219 (257)
T PRK05862        214 AYETTL  219 (257)
T ss_pred             HhcCCH
Confidence            665544

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-32  Score=212.71  Aligned_cols=140  Identities=36%  Similarity=0.484  Sum_probs=124.6

Q ss_pred             ccccCCCCCCcchhhhhhhchh----hhhh------hh----------hhchHHHHHHHHcCeeEecCCeEEeccccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI----QCLK------IW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIG   65 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~----~~~~------~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G   65 (152)
                      |+||    +|+||+++......    ..+.      .+          +|+|||++|+++||+||++++++|++||+++|
T Consensus        60 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G  135 (259)
T PRK06494         60 KAFS----AGNDLKEQAAGGKRGWPESGFGGLTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVG  135 (259)
T ss_pred             Ccee----ccccHHhHhhcCcchhhhHHHHHHHHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccC
Confidence            7899    99999987532111    0110      11          99999999999999999999999999999999


Q ss_pred             ccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281          66 TMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus        66 ~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++...
T Consensus       136 l~p~~g~~~~l~~~vg~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~  215 (259)
T PRK06494        136 LAALAGGLHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVVPAGELLAAAERWADDILACSPLSIRASKQAVYRGL  215 (259)
T ss_pred             CCCCchHHHHHHHHcCHHHHHHHHHcCCcCCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCC
Q psy9281         146 TEGL  149 (152)
Q Consensus       146 ~~~l  149 (152)
                      ..++
T Consensus       216 ~~~~  219 (259)
T PRK06494        216 EVSL  219 (259)
T ss_pred             cCCH
Confidence            5443

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.9e-32  Score=212.01  Aligned_cols=140  Identities=35%  Similarity=0.481  Sum_probs=124.5

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----hhh-----hh----------hhchHHHHHHHHcCeeEecCCeEEeccccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----CLK-----IW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIG   65 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----~~~-----~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G   65 (152)
                      .|+||    +|+|++++.+.....    .+.     .+          +|+|||++|+++||+||++++++|++||+++|
T Consensus        57 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G  132 (254)
T PRK08252         57 GGTFC----AGMDLKAFARGERPSIPGRGFGGLTERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRG  132 (254)
T ss_pred             CCceE----cCcCHHHHhcccchhhhHHHHHHHHHhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcC
Confidence            36899    999999875421111    010     11          99999999999999999999999999999999


Q ss_pred             ccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281          66 TMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus        66 ~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++...
T Consensus       133 l~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~  212 (254)
T PRK08252        133 LVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNRLTEPGQALDAALELAERIAANGPLAVAASKRIVVESG  212 (254)
T ss_pred             CCCCchHHHHHHHHcCHHHHHHHHHcCCccCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             cCC
Q psy9281         146 TEG  148 (152)
Q Consensus       146 ~~~  148 (152)
                      ..+
T Consensus       213 ~~~  215 (254)
T PRK08252        213 DWS  215 (254)
T ss_pred             cCC
Confidence            443

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.4e-32  Score=213.36  Aligned_cols=116  Identities=41%  Similarity=0.676  Sum_probs=111.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       110 ~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  189 (260)
T PRK05980        110 LAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLVNAVVPHE  189 (260)
T ss_pred             EEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHHHHHcCCccCHHHHHHcCCCCcccCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....++
T Consensus       190 ~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~  225 (260)
T PRK05980        190 ELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSI  225 (260)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence            999999999999999999999999999987655443

>PRK05869 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=4.2e-32  Score=206.45  Aligned_cols=138  Identities=28%  Similarity=0.478  Sum_probs=123.7

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      .|+||    +|+||+++......+          .+..+             +|+|||++|+++||+||++++++|++||
T Consensus        61 g~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe  136 (222)
T PRK05869         61 HEIFS----AGDDMPELRTLSAQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATE  136 (222)
T ss_pred             CCCcC----cCcCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCch
Confidence            36899    999999875422111          01111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++.++++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       137 ~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~~  216 (222)
T PRK05869        137 ILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFFDAEEALALGLIDEMVAPDDVYDAAAAWARRFLDGPPHALAAAKAGI  216 (222)
T ss_pred             hccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccc
Q psy9281         142 NIDDT  146 (152)
Q Consensus       142 ~~~~~  146 (152)
                      +..++
T Consensus       217 ~~~~~  221 (222)
T PRK05869        217 SDVYE  221 (222)
T ss_pred             HHHhh
Confidence            87653

>PRK06190 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=3.1e-32  Score=211.38  Aligned_cols=141  Identities=28%  Similarity=0.458  Sum_probs=125.7

Q ss_pred             cccccCCCCCCcchhhhhhhchh--------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI--------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~--------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+|++++.+....        ..+..+             +|+|+|++|+++||+||++++++|++||++
T Consensus        58 g~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  133 (258)
T PRK06190         58 DPAFC----AGLDLKELGGDGSAYGAQDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHAR  133 (258)
T ss_pred             CCCcc----CCcCHHHHhcccchhhHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccc
Confidence            46899    99999987542111        011111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       134 ~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  213 (258)
T PRK06190        134 VGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGLVTEVVPHDELLPRARRLAASIAGNNPAAVRALKASYDD  213 (258)
T ss_pred             cCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCeEecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       214 ~~~~~l  219 (258)
T PRK06190        214 GAAAQT  219 (258)
T ss_pred             hhcCCH
Confidence            655544

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=2.5e-32  Score=211.94  Aligned_cols=140  Identities=41%  Similarity=0.610  Sum_probs=124.9

Q ss_pred             ccccCCCCCCcchhhhhhhchhh---h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ---C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~---~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      |+||    +|+||+++......+   .       +..+             +|+|+|++|+++||+||++++++|++||+
T Consensus        60 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~  135 (260)
T PRK07657         60 KAFC----AGADLKERAGMNEEQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTET  135 (260)
T ss_pred             CceE----cCcChHhhhcCChhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchh
Confidence            6899    999999875321111   0       1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++++++.+++++++..||.+++.+|+.++
T Consensus       136 ~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~  215 (260)
T PRK07657        136 TLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAIEIAEKIASNGPIAVRQAKEAIS  215 (260)
T ss_pred             ccCcCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCC
Q psy9281         143 IDDTEGL  149 (152)
Q Consensus       143 ~~~~~~l  149 (152)
                      .....++
T Consensus       216 ~~~~~~~  222 (260)
T PRK07657        216 NGIQVDL  222 (260)
T ss_pred             HhccCCH
Confidence            7655443

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=99.98  E-value=3e-32  Score=211.48  Aligned_cols=141  Identities=44%  Similarity=0.717  Sum_probs=125.6

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +|+||    +|+||+++.+.....          .+..+             +|+|||++|+++||+||++++++|++||
T Consensus        59 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe  134 (260)
T PRK05809         59 EKAFV----AGADISEMKDLNEEEGRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPE  134 (260)
T ss_pred             CCcee----eCcChHhHhccChHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcc
Confidence            37899    999999875422111          01111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+.+.+++++++..||.+++.+|+.+
T Consensus       135 ~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  214 (260)
T PRK05809        135 VGLGITPGFGGTQRLARIVGPGKAKELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAKALANKIAANAPIAVKLCKDAI  214 (260)
T ss_pred             cccCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCCcccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       215 ~~~~~~~~  222 (260)
T PRK05809        215 NRGMQVDI  222 (260)
T ss_pred             HHHhcCCH
Confidence            87655443

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=2.6e-32  Score=211.30  Aligned_cols=115  Identities=40%  Similarity=0.592  Sum_probs=110.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|++|++++++++++++|.+++++++++|++++++||+++||||+++|++
T Consensus       102 ~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  181 (255)
T PRK06563        102 YCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTGDEFDAQEALRLGLVQEVVPPG  181 (255)
T ss_pred             eeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCCcEeeCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....+
T Consensus       182 ~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~  216 (255)
T PRK06563        182 EQLERAIELAERIARAAPLGVQATLASARAAVREG  216 (255)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCC
Confidence            99999999999999999999999999998765444

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=99.98  E-value=3.3e-32  Score=210.77  Aligned_cols=141  Identities=45%  Similarity=0.772  Sum_probs=125.2

Q ss_pred             cccccCCCCCCcchhhhhhhchhh--------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ--------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~--------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++.+.....        .+..+             +|+|||++|+++||+||++++++|++||++
T Consensus        56 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  131 (255)
T PRK09674         56 ARFFA----AGADLNEMAEKDLAATLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEIT  131 (255)
T ss_pred             CCcee----cccChHhHhccchhhhHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhh
Confidence            36899    999999875421110        11111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       132 ~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~  211 (255)
T PRK09674        132 LGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPELTLERALQLASKIARHSPLALRAAKQALRQ  211 (255)
T ss_pred             cCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       212 ~~~~~~  217 (255)
T PRK09674        212 SQEVDL  217 (255)
T ss_pred             hhcCCH
Confidence            655443

>PRK03580 carnitinyl-CoA dehydratase; Provisional

Probab=99.98  E-value=3.5e-32  Score=211.27  Aligned_cols=139  Identities=29%  Similarity=0.469  Sum_probs=124.1

Q ss_pred             ccccCCCCCCcchhhhhhhchh--hh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI--QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~--~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      |+||    +|+||+++.+....  ..       +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        58 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  133 (261)
T PRK03580         58 KFFS----AGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAK  133 (261)
T ss_pred             Ccee----cccCHHHHhccCcchhhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccc
Confidence            7899    99999987532110  00       1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|+.++++++++|++++++||+++|||++++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       134 ~G~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  213 (261)
T PRK03580        134 LGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQAELMDRARELAQQLVNSAPLAIAALKEIYRE  213 (261)
T ss_pred             cCcCCCccHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCC
Q psy9281         144 DDTEG  148 (152)
Q Consensus       144 ~~~~~  148 (152)
                      ....+
T Consensus       214 ~~~~~  218 (261)
T PRK03580        214 TSEMP  218 (261)
T ss_pred             HhcCC
Confidence            65443

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=3.1e-32  Score=211.01  Aligned_cols=116  Identities=43%  Similarity=0.694  Sum_probs=111.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       104 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  183 (257)
T PRK07658        104 AALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNGVFPEE  183 (257)
T ss_pred             eeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCeecChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....++
T Consensus       184 ~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~  219 (257)
T PRK07658        184 TLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSY  219 (257)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence            999999999999999999999999999987654443

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=99.98  E-value=4e-32  Score=210.37  Aligned_cols=116  Identities=30%  Similarity=0.513  Sum_probs=111.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.++++++++++|+.++++++++|++++++||+++||||+++|++
T Consensus       103 ~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  182 (256)
T TIGR02280       103 VAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGLIWQVVDDA  182 (256)
T ss_pred             eeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCcceeeChH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       183 ~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~  218 (256)
T TIGR02280       183 ALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSL  218 (256)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCH
Confidence            999999999999999999999999999987655443

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated

Probab=99.98  E-value=3.4e-32  Score=212.87  Aligned_cols=116  Identities=29%  Similarity=0.515  Sum_probs=111.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++
T Consensus       114 ~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~llltg~~~~A~eA~~~Glv~~vv~~~  193 (275)
T PRK09120        114 WCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVNESVPLA  193 (275)
T ss_pred             EEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHHHHHHHhcCCccCHHHHHHcCCcceecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       194 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~  229 (275)
T PRK09120        194 QLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTW  229 (275)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCH
Confidence            999999999999999999999999999987655443

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=4.7e-32  Score=210.56  Aligned_cols=141  Identities=46%  Similarity=0.676  Sum_probs=124.7

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .++||    +|+||+++.+....+.        +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        62 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~  137 (261)
T PRK08138         62 EKVFA----AGADIKEFATAGAIEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIK  137 (261)
T ss_pred             CCCee----CCcCHHHHhccchhHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccc
Confidence            36899    9999998754221111        1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+.++.
T Consensus       138 ~Gl~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~  217 (261)
T PRK08138        138 VGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPEALAIGLVSEVVEDEQTLPRALELAREIARMPPLALAQIKEVVLA  217 (261)
T ss_pred             cccCCCCcHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       218 ~~~~~~  223 (261)
T PRK08138        218 GADAPL  223 (261)
T ss_pred             HhcCCH
Confidence            654443

>PRK06144 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=5.1e-32  Score=210.49  Aligned_cols=139  Identities=26%  Similarity=0.400  Sum_probs=123.9

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      +|+||    +|+||+++......+    .       +..+             +|+|||++|+++||+||++++++|++|
T Consensus        63 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~p  138 (262)
T PRK06144         63 DKAFV----AGTDIAQFRAFSTAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFP  138 (262)
T ss_pred             CCcee----cCcCHHHHhhccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeech
Confidence            36899    999999875421110    0       1111             999999999999999999999999999


Q ss_pred             ccc-ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281          61 EII-IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus        61 e~~-~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      |++ +|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+
T Consensus       139 e~~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~  218 (262)
T PRK06144        139 IARTLGNCLSMSNLARLVALLGAARVKDMLFTARLLEAEEALAAGLVNEVVEDAALDARADALAELLAAHAPLTLRATKE  218 (262)
T ss_pred             hHHhccCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            997 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccC
Q psy9281         140 AVNIDDTE  147 (152)
Q Consensus       140 ~l~~~~~~  147 (152)
                      .++.....
T Consensus       219 ~l~~~~~~  226 (262)
T PRK06144        219 ALRRLRRE  226 (262)
T ss_pred             HHHHhhhc
Confidence            99876543

>PRK06127 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=5e-32  Score=211.29  Aligned_cols=116  Identities=28%  Similarity=0.459  Sum_probs=111.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|++|+++++++|++++|.+++++++++|++++++||+++||||+++|++
T Consensus       116 ~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  195 (269)
T PRK06127        116 YCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLFYTARRFDAAEALRIGLVHRVTAAD  195 (269)
T ss_pred             EEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCEeeCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       196 ~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~  231 (269)
T PRK06127        196 DLETALADYAATIAGNAPLTLRAAKRAIAELLKDEP  231 (269)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCH
Confidence            999999999999999999999999999987655443

>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase

Probab=99.98  E-value=6.5e-32  Score=209.29  Aligned_cols=137  Identities=32%  Similarity=0.428  Sum_probs=121.8

Q ss_pred             cccccCCCCCCcchhhhhhhchh---------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI---------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~---------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      +|+||    +|+||+++......         ..+..+             +|+|||++|+++||+||++++++|++||+
T Consensus        57 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~  132 (256)
T TIGR03210        57 DKAFC----TGGDQSTHDGGYDGRGTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGP  132 (256)
T ss_pred             CCcee----cCcChHHHhccccchhHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccc
Confidence            37899    99999987431110         011111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+.+++++|++++|+.+|++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+.++
T Consensus       133 ~~G~~~~~~~~~~l~~~vG~~~A~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~  212 (256)
T TIGR03210       133 KVGSVDPGYGTALLARVVGEKKAREIWYLCRRYTAQEALAMGLVNAVVPHDQLDAEVQKWCDEIVEKSPTAIAIAKRSFN  212 (256)
T ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCceeeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999888788899999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccc
Q psy9281         143 IDD  145 (152)
Q Consensus       143 ~~~  145 (152)
                      ...
T Consensus       213 ~~~  215 (256)
T TIGR03210       213 MDT  215 (256)
T ss_pred             Hhh
Confidence            653

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.

>PRK08259 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=6.4e-32  Score=209.14  Aligned_cols=141  Identities=26%  Similarity=0.255  Sum_probs=125.0

Q ss_pred             cccccCCCCCCcchhhhhhhchhh-------h--hh--hh----------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ-------C--LK--IW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~-------~--~~--~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .++||    +|+||+++.......       .  ..  .+          +|+|||++|+++||+||++++++|++||++
T Consensus        57 g~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  132 (254)
T PRK08259         57 GGTFC----AGADLKAVGTGRGNRLHPSGDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRR  132 (254)
T ss_pred             CCCcc----CCcChHHHhcccchhhhhhhcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccc
Confidence            36899    999999875421110       0  00  11          999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|..+++++|++++|+.++++++++|++++++||+++||||+++|++++.+.+.++++++++.||.+++.+|+.++.
T Consensus       133 ~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~  212 (254)
T PRK08259        133 WGVPLIDGGTVRLPRLIGHSRAMDLILTGRPVDADEALAIGLANRVVPKGQARAAAEELAAELAAFPQTCLRADRLSALE  212 (254)
T ss_pred             cCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       213 ~~~~~~  218 (254)
T PRK08259        213 QWGLPE  218 (254)
T ss_pred             hhcCCH
Confidence            655444

>PLN02888 enoyl-CoA hydratase

Probab=99.98  E-value=5.8e-32  Score=210.53  Aligned_cols=140  Identities=27%  Similarity=0.364  Sum_probs=124.4

Q ss_pred             ccccCCCCCCcchhhhhhhchh-------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI-------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIG   65 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~-------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G   65 (152)
                      |+||    +|+||+++.+....       ..+..+             +|+|||++|+++||+||++++++|++||+++|
T Consensus        65 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G  140 (265)
T PLN02888         65 RAFC----SGVDLTAAEEVFKGDVKDVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFG  140 (265)
T ss_pred             Cccc----CCCCHHHHHhhccchhhHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCcccccc
Confidence            6899    99999976431110       111111             99999999999999999999999999999999


Q ss_pred             ccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281          66 TMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus        66 ~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++|+.+++++|++++|++++++++++|++++++||+++||||+++|++++.+++.+++++++..+|.+++.+|+.++...
T Consensus       141 l~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~  220 (265)
T PLN02888        141 IFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWGLVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVINDGL  220 (265)
T ss_pred             CCCCccHhhHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998765


Q ss_pred             cCCC
Q psy9281         146 TEGL  149 (152)
Q Consensus       146 ~~~l  149 (152)
                      ..++
T Consensus       221 ~~~~  224 (265)
T PLN02888        221 KLDL  224 (265)
T ss_pred             cCCH
Confidence            5543

>PRK09245 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=4.9e-32  Score=210.90  Aligned_cols=116  Identities=36%  Similarity=0.620  Sum_probs=111.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|++|++++++++++++|..++++++++|++++++||+++||||+++|++
T Consensus       113 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  192 (266)
T PRK09245        113 PAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEWGLVSRVVPAD  192 (266)
T ss_pred             EeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHHHHHHHHcCCCcCHHHHHHcCCcceecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....++
T Consensus       193 ~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~  228 (266)
T PRK09245        193 QLLPAARALAERIAANPPHALRLTKRLLREGQHASL  228 (266)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCH
Confidence            999999999999999999999999999987655443

>PRK07260 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=4.8e-32  Score=209.86  Aligned_cols=116  Identities=30%  Similarity=0.370  Sum_probs=111.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.++++++++++|+.++++++++|++++++||+++||||+++|++
T Consensus       108 ~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~sa~eA~~~Glv~~vv~~~  187 (255)
T PRK07260        108 AVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVYRVAESE  187 (255)
T ss_pred             eeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHHHHHhCCccCHHHHHHcCCcceecCHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+.+.++++++++.||.+++.+|+.++.....++
T Consensus       188 ~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~  223 (255)
T PRK07260        188 KLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGW  223 (255)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCH
Confidence            999999999999999999999999999988765544

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=99.98  E-value=7e-32  Score=209.77  Aligned_cols=116  Identities=33%  Similarity=0.481  Sum_probs=111.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|++++++++++|++++++||+++||||+++|++
T Consensus       110 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  189 (263)
T PRK07799        110 PAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHVVPDG  189 (263)
T ss_pred             eEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccEecCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       190 ~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l  225 (263)
T PRK07799        190 QALDKALELAELINANGPLAVQAILRTIRETEGMHE  225 (263)
T ss_pred             hHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCH
Confidence            999999999999999999999999999987654443

>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase)

Probab=99.97  E-value=8.9e-32  Score=208.83  Aligned_cols=112  Identities=34%  Similarity=0.585  Sum_probs=109.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|++++++++++|++++++||+++||||+++|++
T Consensus       107 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  186 (259)
T TIGR01929       107 YAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEQALDMGLVNTVVPLA  186 (259)
T ss_pred             EEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHHHHhCCccCHHHHHHcCCcccccCHH
Confidence            99999999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++.+++.++++++++.||.+++.+|+.++...
T Consensus       187 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~  218 (259)
T TIGR01929       187 DLEKETVRWCREILQKSPMAIRMLKAALNADC  218 (259)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999998753

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=7.3e-32  Score=210.56  Aligned_cols=116  Identities=33%  Similarity=0.570  Sum_probs=111.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc-
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP-  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~-  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|++++++++++|++++++||+++||||+++|+ 
T Consensus       119 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~  198 (272)
T PRK06142        119 WCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRIIGDGHLRELALTGRDIDAAEAEKIGLVNRVYDDA  198 (272)
T ss_pred             ccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCccEecCCH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999985 


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      +++.+++.+++++++..||.+++.+|+.+++....++
T Consensus       199 ~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l  235 (272)
T PRK06142        199 DALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRV  235 (272)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCH
Confidence            8899999999999999999999999999987655444

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=8.9e-32  Score=209.02  Aligned_cols=116  Identities=30%  Similarity=0.521  Sum_probs=111.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.++++++++++|..++++++++|++++++||+++||||+++|++
T Consensus       109 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  188 (262)
T PRK08140        109 VAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQAEQWGLIWRVVDDA  188 (262)
T ss_pred             eeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCCccEeeChH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       189 ~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~  224 (262)
T PRK08140        189 ALADEAQQLAAHLATQPTRGLALIKQAMNASATNTL  224 (262)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCH
Confidence            999999999999999999999999999987655543

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=99.97  E-value=1.1e-31  Score=207.24  Aligned_cols=142  Identities=22%  Similarity=0.307  Sum_probs=126.2

Q ss_pred             cccccCCCCCCcchhhhhhhchh-------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI-------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIII   64 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~-------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~   64 (152)
                      .|+||    +|+|++++......       ..+..+             +|+|||++|+++||+||++++++|++||+++
T Consensus        59 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~  134 (249)
T PRK07110         59 PNYFA----TGGTQEGLLSLQTGKGTFTEANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKY  134 (249)
T ss_pred             CCCee----CCcChHHHhhccchhhhHhhHHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhcc
Confidence            46899    99999987542211       111111             9999999999999999999999999999999


Q ss_pred             cccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281          65 GTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus        65 G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      |++|+.++++++++++|+.++++++++|++++++||+++|||++++|++++.+++.++++++++.||.+++.+|+.++..
T Consensus       135 Gl~p~~g~~~~l~~~~g~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~  214 (249)
T PRK07110        135 GFTPGMGATAILPEKLGLALGQEMLLTARYYRGAELKKRGVPFPVLPRAEVLEKALELARSLAEKPRHSLVLLKDHLVAD  214 (249)
T ss_pred             CCCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCeEEeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             ccCCCC
Q psy9281         145 DTEGLN  150 (152)
Q Consensus       145 ~~~~l~  150 (152)
                      ...+++
T Consensus       215 ~~~~l~  220 (249)
T PRK07110        215 RRRRLP  220 (249)
T ss_pred             hhccHH
Confidence            655543

>PRK08139 enoyl-CoA hydratase; Validated

Probab=99.97  E-value=1.3e-31  Score=208.62  Aligned_cols=115  Identities=32%  Similarity=0.484  Sum_probs=108.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+++ .++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       114 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~  192 (266)
T PRK08139        114 IATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAMEMLLTGEFIDAATAREWGLVNRVVPAD  192 (266)
T ss_pred             eeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCccEeeChh
Confidence            99999999999999999999999999999999998775 46799999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+.+.+++++++..||.+++.+|+.++.....++
T Consensus       193 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~  228 (266)
T PRK08139        193 ALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPL  228 (266)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCH
Confidence            999999999999999999999999999987655443

>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix

Probab=99.97  E-value=7.1e-32  Score=207.45  Aligned_cols=139  Identities=41%  Similarity=0.603  Sum_probs=125.0

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +++||    +|.|++++.+......          +..+             +|+|+|++|+++||+||++++++|++||
T Consensus        52 ~~~F~----~G~Dl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe  127 (245)
T PF00378_consen   52 GKAFC----AGADLKEFLNSDEEEAREFFRRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPE  127 (245)
T ss_dssp             TSESB----ESB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGG
T ss_pred             ccccc----cccchhhhhccccccccccchhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeee
Confidence            57899    9999999877621111          1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|++++++++++|++++++||+++||||+++|++++.+.+.+++++++..|+.+++.+|+.+
T Consensus       128 ~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~  207 (245)
T PF00378_consen  128 VRLGIFPGAGGTFRLPRLIGPSRARELLLTGEPISAEEALELGLVDEVVPDEELDEEALELAKRLAAKPPSALRATKKAL  207 (245)
T ss_dssp             GGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCEEEHHHHHHTTSSSEEESGGGHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             cccCcccccccccccceeeecccccccccccccchhHHHHhhcceeEEcCchhhhHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccC
Q psy9281         142 NIDDTE  147 (152)
Q Consensus       142 ~~~~~~  147 (152)
                      ++....
T Consensus       208 ~~~~~~  213 (245)
T PF00378_consen  208 NRALEQ  213 (245)
T ss_dssp             HHHHHS
T ss_pred             HHHHHh
Confidence            986544

Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=1.1e-31  Score=208.35  Aligned_cols=115  Identities=21%  Similarity=0.281  Sum_probs=109.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++ ++
T Consensus       108 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv-~~  186 (260)
T PRK07659        108 PAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLIDEVI-GG  186 (260)
T ss_pred             ceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHHHHhCCccCHHHHHHcCChHHHh-hh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999 78


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....++
T Consensus       187 ~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  222 (260)
T PRK07659        187 DFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQL  222 (260)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCH
Confidence            899999999999999999999999999987655444

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=2.3e-31  Score=206.47  Aligned_cols=116  Identities=29%  Similarity=0.497  Sum_probs=111.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|++|++++++++++++|++++++++++|++++++||+++||||+++|++
T Consensus       108 ~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  187 (260)
T PRK07511        108 AAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGVVNRLAEPG  187 (260)
T ss_pred             eeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCccEeeCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.++..+|+.++.....++
T Consensus       188 ~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~  223 (260)
T PRK07511        188 QALAEALALADQLAAGSPNALARIKSLIADAPEATL  223 (260)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCH
Confidence            999999999999999999999999999987655443

>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated

Probab=99.97  E-value=1.4e-31  Score=208.31  Aligned_cols=115  Identities=23%  Similarity=0.382  Sum_probs=109.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++.. +++++|.+++++++++|++++++||+++||||+++|++
T Consensus       111 ~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  189 (265)
T PRK05674        111 AAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGERAARRYALTAERFDGRRARELGLLAESYPAA  189 (265)
T ss_pred             EEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCHHHHHHHHHhCcccCHHHHHHCCCcceecCHH
Confidence            99999999999999999999999999999999999877654 99999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       190 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~  225 (265)
T PRK05674        190 ELEAQVEAWIANLLLNSPQALRASKDLLREVGDGEL  225 (265)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCh
Confidence            999999999999999999999999999988765554

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=99.97  E-value=1.6e-31  Score=209.00  Aligned_cols=116  Identities=38%  Similarity=0.574  Sum_probs=110.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc-
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP-  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~-  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|.+++++++++|++++++||+++||||+++|+ 
T Consensus       121 ~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~  200 (275)
T PLN02664        121 ACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVSRVFGSK  200 (275)
T ss_pred             ccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCceeeCCh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999995 


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      +++.+.+.+++++++..||.+++.+|+.++.....++
T Consensus       201 ~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~  237 (275)
T PLN02664        201 EDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSV  237 (275)
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence            8899999999999999999999999999987654433

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=1.6e-31  Score=207.09  Aligned_cols=140  Identities=29%  Similarity=0.448  Sum_probs=125.1

Q ss_pred             ccccCCCCCCcchhhhhhhchh--hh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI--QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~--~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      ++||    +|+||+++......  ..       +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        60 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~  135 (259)
T PRK06688         60 RAFS----AGGDIKDFPKAPPKPPDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAK  135 (259)
T ss_pred             CCcc----CccCHHHHhccCcchHHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhh
Confidence            6899    99999987543211  11       1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|++++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       136 ~G~~p~~g~~~~l~~~~G~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~  215 (259)
T PRK06688        136 LGLCPDAGGSALLPRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVVPAAELDAEADAQAAKLAAGPASALRYTKRAINA  215 (259)
T ss_pred             cCCCCCcchhhHHHHHhhHHHHHHHHHhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       216 ~~~~~~  221 (259)
T PRK06688        216 ATLTEL  221 (259)
T ss_pred             hhhCCH
Confidence            655543

>PRK06023 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=2.8e-31  Score=205.18  Aligned_cols=136  Identities=24%  Similarity=0.371  Sum_probs=122.3

Q ss_pred             cccccCCCCCCcchhhhhhhch-h----hh----hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKF-I----QC----LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~-~----~~----~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      .++||    +|+||+++..... .    ..    +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        60 g~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~  135 (251)
T PRK06023         60 EGCFS----AGNDMQDFLAAAMGGTSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFV  135 (251)
T ss_pred             CCCee----cCcCHHHHhhccccchhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCccc
Confidence            36899    9999998754211 0    01    1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|++++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++
T Consensus       136 ~~Gl~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~  215 (251)
T PRK06023        136 DLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAETLKAAEELAAKPPQALQIARDLMR  215 (251)
T ss_pred             ccCCCCCchHHHHHHHHHhHHHHHHHHHhCCCCCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy9281         143 ID  144 (152)
Q Consensus       143 ~~  144 (152)
                      ..
T Consensus       216 ~~  217 (251)
T PRK06023        216 GP  217 (251)
T ss_pred             hc
Confidence            64

>PRK07327 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=2.5e-31  Score=207.26  Aligned_cols=111  Identities=23%  Similarity=0.277  Sum_probs=108.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|++++++++++|++++++||+++||||+++|++
T Consensus       116 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  195 (268)
T PRK07327        116 PAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKAKYYLLLCEPVSGEEAERIGLVSLAVDDD  195 (268)
T ss_pred             eeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      ++++++.++++++++.||.+++.+|+.++..
T Consensus       196 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~  226 (268)
T PRK07327        196 ELLPKALEVAERLAAGSQTAIRWTKYALNNW  226 (268)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999864

>PRK05995 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=3.3e-31  Score=205.81  Aligned_cols=115  Identities=29%  Similarity=0.381  Sum_probs=108.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++.+ +++++|++++++++++|++++++||+++||||+++|++
T Consensus       109 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  187 (262)
T PRK05995        109 DAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAARRYFLTAERFDAAEALRLGLVHEVVPAE  187 (262)
T ss_pred             EEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCeecCHH
Confidence            99999999999999999999999999999999999887665 89999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....++
T Consensus       188 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~  223 (262)
T PRK05995        188 ALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPI  223 (262)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCh
Confidence            999999999999999999999999999987655443

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=3e-31  Score=207.67  Aligned_cols=116  Identities=27%  Similarity=0.369  Sum_probs=110.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccC-CccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMP-GAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p-~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++| +++++++|++++|..++++++++|++++++||+++||||+++|+
T Consensus       123 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~  202 (277)
T PRK08258        123 VCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASELLYTGRSMSAEEGERWGFFNRLVEP  202 (277)
T ss_pred             eeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCcEecCH
Confidence            99999999999999999999999999999999985 67889999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      +++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       203 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l  239 (277)
T PRK08258        203 EELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGL  239 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCH
Confidence            9999999999999999999999999999987665544

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional

Probab=99.97  E-value=3.7e-31  Score=205.57  Aligned_cols=136  Identities=26%  Similarity=0.391  Sum_probs=121.9

Q ss_pred             ccccCCCCCCcchhhhhhhch--h---hh----hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKF--I---QC----LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~--~---~~----~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      |+||    +|.||+++.....  .   ..    +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        60 ~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  135 (261)
T PRK11423         60 KVWS----AGHDIHELPSGGRDPLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPAN  135 (261)
T ss_pred             CeeE----CCcCHHHHhhccccHHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhh
Confidence            7899    9999998743211  0   11    1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.++++++++++|++++++++++|++++++||+++||||+++|++++++.+.+++++++..||.+++.+|+.++.
T Consensus       136 ~Gl~~~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~  215 (261)
T PRK11423        136 LGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEQLRV  215 (261)
T ss_pred             cCCCCCccHHHHHHHHhHHHHHHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999986


Q ss_pred             cc
Q psy9281         144 DD  145 (152)
Q Consensus       144 ~~  145 (152)
                      ..
T Consensus       216 ~~  217 (261)
T PRK11423        216 LG  217 (261)
T ss_pred             hc
Confidence            43

>PRK07396 dihydroxynaphthoic acid synthetase; Validated

Probab=99.97  E-value=4.5e-31  Score=206.29  Aligned_cols=112  Identities=34%  Similarity=0.567  Sum_probs=108.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++.+|++++|++++++++++|++++++||+++||||+++|++
T Consensus       117 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~l~ltg~~~~A~eA~~~GLv~~vv~~~  196 (273)
T PRK07396        117 YAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKAREIWFLCRQYDAQEALDMGLVNTVVPLA  196 (273)
T ss_pred             EEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHHHHHhCCCcCHHHHHHcCCcCeecCHH
Confidence            99999999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++.+++.+++++++..||.+++.+|+.++...
T Consensus       197 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~  228 (273)
T PRK07396        197 DLEKETVRWCREMLQNSPMALRCLKAALNADC  228 (273)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999998653

>PRK05870 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=1.9e-31  Score=205.95  Aligned_cols=135  Identities=25%  Similarity=0.281  Sum_probs=121.1

Q ss_pred             ccccCCCCCCcchhhhhhhch---hhh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKF---IQC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~---~~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      |+||    +|+||+++.+...   ...       +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        58 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~  133 (249)
T PRK05870         58 KAFC----AGADLTALGAAPGRPAEDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQ  133 (249)
T ss_pred             CCee----cCcChHHHhcccccchHHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCccc
Confidence            6899    9999998754311   111       1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|++++++++++++|++++++++++|++++++||+++||||+++  +++.+++.+++++++..||.+++.+|+.++
T Consensus       134 ~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv--~~l~~~a~~~a~~la~~~~~a~~~~K~~~~  211 (249)
T PRK05870        134 KLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLALMVA--DDPVAAALELAAGPAAAPRELVLATKASMR  211 (249)
T ss_pred             ccCcCCCCcceeeHHhhhCHHHHHHHHHhCCccCHHHHHHcCCHHHHH--hhHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999  689999999999999999999999999998


Q ss_pred             cccc
Q psy9281         143 IDDT  146 (152)
Q Consensus       143 ~~~~  146 (152)
                      ....
T Consensus       212 ~~~~  215 (249)
T PRK05870        212 ATAS  215 (249)
T ss_pred             hccc
Confidence            7654

>PRK05981 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=4.4e-31  Score=205.56  Aligned_cols=116  Identities=28%  Similarity=0.413  Sum_probs=111.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++++++++++|+.++++++++|++++++||+++|||++++|++
T Consensus       113 ~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  192 (266)
T PRK05981        113 PAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWGLVNRVVDDA  192 (266)
T ss_pred             EeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcCHHHHHHcCCceEeeCHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       193 ~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~  228 (266)
T PRK05981        193 ELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDF  228 (266)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCH
Confidence            999999999999999999999999999987654443

>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional

Probab=99.97  E-value=3.3e-31  Score=207.59  Aligned_cols=116  Identities=20%  Similarity=0.350  Sum_probs=110.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccc-cCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGT-MPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~-~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|+ +|+.++++++++++|+.++++++++|++++++||+++||||+++|.
T Consensus       117 ~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~  196 (278)
T PLN03214        117 ACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPA  196 (278)
T ss_pred             cccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHHHHHHHHHcCCccCHHHHHHcCCCcEecCh
Confidence            999999999999999999999999999999999 5888889999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      +++.+.+.+++++++..||.+++.+|+.+++....++
T Consensus       197 ~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  233 (278)
T PLN03214        197 AALMEAAASAMERALKLPSAARAATKALLREEFSAAW  233 (278)
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHH
Confidence            9999999999999999999999999999987655443

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=5e-31  Score=205.79  Aligned_cols=116  Identities=31%  Similarity=0.518  Sum_probs=110.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.++++++++++|+.++++++++|++++++||+++||||+++|++
T Consensus       118 ~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  197 (272)
T PRK06210        118 ACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFYAEEALRLGLVNRVVPPD  197 (272)
T ss_pred             eeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhhhCHHHHHHHHHcCCccCHHHHHHcCCcceecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC-CHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEH-SPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~-~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++.. +|.++..+|+.++.....++
T Consensus       198 ~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l  234 (272)
T PRK06210        198 ELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTL  234 (272)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCH
Confidence            9999999999999985 99999999999987655544

>PRK06213 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=4.9e-31  Score=201.30  Aligned_cols=141  Identities=18%  Similarity=0.158  Sum_probs=123.6

Q ss_pred             ccccCCCCCCcchhhhhhhchh--hh-------hhhh-------------hhchHHHHHHHHcCeeEecCC-eEEecccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI--QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEK-AKFGQPEI   62 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~--~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~-a~f~~pe~   62 (152)
                      |+||    +|+|++++......  ..       +..+             +|+|+|++|+++||+||++++ ++|++||+
T Consensus        55 ~~F~----~G~Dl~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~  130 (229)
T PRK06213         55 GIFS----GGFDLKVMTSGAQAAIALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEV  130 (229)
T ss_pred             CceE----cCcCHHHHhcchHhHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchh
Confidence            6899    99999987532111  00       1111             999999999999999999999 99999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+.++..++++++|+..+++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+.++
T Consensus       131 ~~Gl~~~~~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~  210 (229)
T PRK06213        131 AIGMTMPHAAIELARDRLTPSAFQRAVINAEMFDPEEAVAAGFLDEVVPPEQLLARAQAAARELAGLNMGAHAATKLKVR  210 (229)
T ss_pred             hhCCcCChHHHHHHHHHcCHHHHHHHHHcCcccCHHHHHHCCCceeccChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            99998888888889999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCC
Q psy9281         143 IDDTEGLN  150 (152)
Q Consensus       143 ~~~~~~l~  150 (152)
                      ......++
T Consensus       211 ~~~~~~l~  218 (229)
T PRK06213        211 AAALEAIR  218 (229)
T ss_pred             HHHHHHHH
Confidence            86554443

>PRK08260 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=1.4e-30  Score=205.62  Aligned_cols=112  Identities=30%  Similarity=0.417  Sum_probs=108.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|.+++++++++|++++++||+++||||+++|++
T Consensus       123 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~  202 (296)
T PRK08260        123 PAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPD  202 (296)
T ss_pred             eeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhhhHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC-CHHHHHHHHHHHhccc
Q psy9281         114 KLLEETIKLAERIGEH-SPLIVTQVKEAVNIDD  145 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~-~~~a~~~~K~~l~~~~  145 (152)
                      ++.+++.+++++++.. ||.+++.+|+.++...
T Consensus       203 ~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~  235 (296)
T PRK08260        203 ELLPAARALAREIADNTSPVSVALTRQMMWRMA  235 (296)
T ss_pred             HHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcc
Confidence            9999999999999985 9999999999998764

>PRK05864 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=6.9e-31  Score=205.53  Aligned_cols=113  Identities=34%  Similarity=0.405  Sum_probs=108.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccC-CccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMP-GAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p-~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++| +.|++++|++++|+.++++++++|++++++||+++||||+++|+
T Consensus       119 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~  198 (276)
T PRK05864        119 PAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPD  198 (276)
T ss_pred             EeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhhhCHHHHHHHHHcCCccCHHHHHHcCCcceeeCH
Confidence            99999999999999999999999999999999997 67888999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      +++.+++.+++++|+..||.+++.+|+.++....
T Consensus       199 ~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~  232 (276)
T PRK05864        199 EQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLD  232 (276)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999986543

>PRK07468 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=1.1e-30  Score=203.08  Aligned_cols=112  Identities=26%  Similarity=0.401  Sum_probs=106.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.++++ +.+++|..++++|+++|++++++||+++||||+++|++
T Consensus       110 ~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~-~~~~vG~~~a~~lll~g~~~~a~eA~~~Glv~~v~~~~  188 (262)
T PRK07468        110 QAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPY-VVARMGEANARRVFMSARLFDAEEAVRLGLLSRVVPAE  188 (262)
T ss_pred             EEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhh-HHhhccHHHHHHHHHhCCccCHHHHHHcCCcceecCHH
Confidence            99999999999999999999999999999999999998887 55669999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+.+.++++++++.||.+++.+|+.++....
T Consensus       189 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  221 (262)
T PRK07468        189 RLDAAVEAEVTPYLSCAPGAVAAAKALVRALGA  221 (262)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999986543

>PLN02921 naphthoate synthase

Probab=99.97  E-value=1.8e-30  Score=207.34  Aligned_cols=112  Identities=33%  Similarity=0.538  Sum_probs=109.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++++++++++|.+++++++++|++++++||+++||||+++|++
T Consensus       171 ~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A~ellltG~~~~A~eA~~~GLV~~vv~~~  250 (327)
T PLN02921        171 YAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKAREMWFLARFYTASEALKMGLVNTVVPLD  250 (327)
T ss_pred             EEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceEEeCHH
Confidence            99999999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++.+++.+++++|+..||.+++.+|+.++...
T Consensus       251 ~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~  282 (327)
T PLN02921        251 ELEGETVKWCREILRNSPTAIRVLKSALNAAD  282 (327)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999998753

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=1.8e-30  Score=200.53  Aligned_cols=113  Identities=29%  Similarity=0.480  Sum_probs=106.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++   +++++|++++|+.++++++++|++++++||+++||||+++|++
T Consensus       104 ~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  180 (249)
T PRK07938        104 FCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEVVPRD  180 (249)
T ss_pred             EEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcCCHHHHHHCCCccEEeCHH
Confidence            9999999999999999999999999999999986   3566799999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       181 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l  216 (249)
T PRK07938        181 QLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDV  216 (249)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCH
Confidence            999999999999999999999999999987655443

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=5.1e-30  Score=198.77  Aligned_cols=113  Identities=38%  Similarity=0.578  Sum_probs=106.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|+.   ++.+++++++|+.++++++++|++++++||+++||||+++|++
T Consensus       107 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~lll~g~~~~a~eA~~~GLv~~vv~~~  183 (257)
T PRK06495        107 PALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRRMMLTGYRVPAAELYRRGVIEACLPPE  183 (257)
T ss_pred             eeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHHHHHcCCeeCHHHHHHcCCcceecCHH
Confidence            9999999999999999999999999999999997   3466799999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.++.....++
T Consensus       184 ~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  219 (257)
T PRK06495        184 ELMPEAMEIAREIASKSPLATRLAKDALNTIENMSL  219 (257)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence            999999999999999999999999999987654443

>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase

Probab=99.97  E-value=7e-30  Score=197.44  Aligned_cols=137  Identities=20%  Similarity=0.298  Sum_probs=114.7

Q ss_pred             ccccCCCCCCcchhhhhhhchhh-------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ-------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIG   65 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~-------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G   65 (152)
                      ++||    +|.||+++.......       .+..+             +|+|||++|+++||+||++++++|++||+++|
T Consensus        55 ~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G  130 (251)
T TIGR03189        55 PHFS----FGASVAEHMPDQCAAMLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLG  130 (251)
T ss_pred             Ccee----cCcChhhhCchhHHHHHHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcC
Confidence            6899    999999853211111       11111             99999999999999999999999999999999


Q ss_pred             ccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHH-HHHHhcCCHHHHHHHHHHHhcc
Q psy9281          66 TMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKL-AERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus        66 ~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~-a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      ++|++ ++++|++++|+.++++++++|++++++||+++||||+++|+++  +.+.+. +++++..||.+++.+|+.++..
T Consensus       131 l~p~~-~~~~l~~~vg~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~~~~--~~a~~~~a~~la~~~p~a~~~~K~~l~~~  207 (251)
T TIGR03189       131 VFAPA-ASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPE--NAALAWFDEHPAKLSASSLRFAVRAARLG  207 (251)
T ss_pred             CCCCc-hHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceecCcHH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence            99874 5678999999999999999999999999999999999998543  456665 6899999999999999999876


Q ss_pred             ccCCC
Q psy9281         145 DTEGL  149 (152)
Q Consensus       145 ~~~~l  149 (152)
                      ...++
T Consensus       208 ~~~~~  212 (251)
T TIGR03189       208 MNERV  212 (251)
T ss_pred             hcccH
Confidence            55443

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.

>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

Probab=99.97  E-value=5.5e-30  Score=198.47  Aligned_cols=137  Identities=42%  Similarity=0.645  Sum_probs=121.4

Q ss_pred             ccccCCCCCCcchhhhhh---hchh-hh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKN---LKFI-QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~---~~~~-~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      |+||    +|+||+++..   .... ..       +..+             +|+|||++|+++||+||++++++|++||
T Consensus        60 ~~Fs----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe  135 (257)
T COG1024          60 KAFS----AGADLKELLSPEDGNAAENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPE  135 (257)
T ss_pred             Ccee----cccCHHHHhcccchhHHHHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcc
Confidence            7899    9999999863   1111 11       1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc-chHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP-EKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~-~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      +++|++|+.|+++++++++|..++++++++|++++++||+++|||++++++ +++.+.+.+++++++. ||.++..+|+.
T Consensus       136 ~~iGl~Pg~g~~~~l~r~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~  214 (257)
T COG1024         136 VNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDEVVPDAEELLERALELARRLAA-PPLALAATKRL  214 (257)
T ss_pred             cccccCCCCcHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHHHHHHHHcc-CHHHHHHHHHH
Confidence            999999977999999999999999999999999999999999999999985 7999999999999998 99999999999


Q ss_pred             HhccccC
Q psy9281         141 VNIDDTE  147 (152)
Q Consensus       141 l~~~~~~  147 (152)
                      ++.....
T Consensus       215 ~~~~~~~  221 (257)
T COG1024         215 VRAALEA  221 (257)
T ss_pred             HHHhhhc
Confidence            9876543

>PRK08321 naphthoate synthase; Validated

Probab=99.97  E-value=1e-29  Score=201.20  Aligned_cols=113  Identities=34%  Similarity=0.573  Sum_probs=108.8

Q ss_pred             hhchHHHHHHHHcCeeEec-CCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~-~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++ ++++|++||+++|++|+++++++|++++|++++++++++|++++++||+++||||+++|+
T Consensus       145 ~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~  224 (302)
T PRK08321        145 WAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPH  224 (302)
T ss_pred             eeehHHHHHHHhCCEEEEecCCCEEECCccccccCCCchHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCH
Confidence            9999999999999999999 699999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      +++.+++.+++++|+..||.+++.+|+.++....
T Consensus       225 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~  258 (302)
T PRK08321        225 AELETEALEWAREINGKSPTAMRMLKYAFNLTDD  258 (302)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999986533

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=99.97  E-value=7.1e-30  Score=198.31  Aligned_cols=114  Identities=30%  Similarity=0.418  Sum_probs=107.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++++++++++|+.++++++++|++++++||+++||||++++  
T Consensus       112 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~--  189 (262)
T PRK07509        112 VCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARELTYTARVFSAEEALELGLVTHVSD--  189 (262)
T ss_pred             eeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHcCChhhhhc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999995  


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       190 ~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~  225 (262)
T PRK07509        190 DPLAAALALAREIAQRSPDAIAAAKRLINRSWTASV  225 (262)
T ss_pred             hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence            467899999999999999999999999987655443

>PRK08788 enoyl-CoA hydratase; Validated

Probab=99.96  E-value=1.6e-29  Score=198.67  Aligned_cols=109  Identities=28%  Similarity=0.351  Sum_probs=100.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++++++++++|++++++++++|++++++||+++||||+++|++
T Consensus       131 ~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~  210 (287)
T PRK08788        131 DALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDG  210 (287)
T ss_pred             eeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      ++.+++.+++++++.. |.+...+|+..+.
T Consensus       211 el~~~a~~~a~~ia~~-~~~~~a~k~~~~~  239 (287)
T PRK08788        211 QGEAAVRTFIRKSKRK-LNGWRAMLRARRR  239 (287)
T ss_pred             HHHHHHHHHHHHHhcC-ccHHHHHHHHHHh
Confidence            9999999999999976 5555555554443

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=99.96  E-value=2.5e-29  Score=194.02  Aligned_cols=136  Identities=23%  Similarity=0.260  Sum_probs=117.6

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIG   65 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G   65 (152)
                      |+||    +|.||+++.+......       +..+             +|+|+|++|+++||+||++++++|++||+++|
T Consensus        55 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~G  130 (248)
T PRK06072         55 RAFC----VGADLSEFAPDFAIDLRETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLG  130 (248)
T ss_pred             CCcc----cCcCHHHHhhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcC
Confidence            6899    9999998754211111       1111             99999999999999999999999999999999


Q ss_pred             ccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281          66 TMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus        66 ~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++|+.++++++++++|. ++++++++|++++++||+++||||++   +++.+++.+++++++..||.+++.+|+.++...
T Consensus       131 l~p~~g~~~~l~~~~g~-~a~~lll~g~~~~a~eA~~~Glv~~~---~~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~  206 (248)
T PRK06072        131 LASDTGVAYFLLKLTGQ-RFYEILVLGGEFTAEEAERWGLLKIS---EDPLSDAEEMANRISNGPFQSYIAAKRMINLVL  206 (248)
T ss_pred             cCCCchHHHHHHHHhhH-HHHHHHHhCCccCHHHHHHCCCcccc---chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence            99999999999999996 89999999999999999999999964   467889999999999999999999999998765


Q ss_pred             cCCC
Q psy9281         146 TEGL  149 (152)
Q Consensus       146 ~~~l  149 (152)
                      ..++
T Consensus       207 ~~~l  210 (248)
T PRK06072        207 YNDL  210 (248)
T ss_pred             hcCH
Confidence            5443

>PRK07854 enoyl-CoA hydratase; Provisional

Probab=99.96  E-value=3.7e-29  Score=192.57  Aligned_cols=107  Identities=27%  Similarity=0.373  Sum_probs=102.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|++++++++++|++++++||+++||||++++  
T Consensus        96 ~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a~eA~~~Glv~~v~~--  173 (243)
T PRK07854         96 PAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEKLTAEQALATGMANRIGT--  173 (243)
T ss_pred             cccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCcccccC--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999975  


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                       +. ++.++++++++.||.+++.+|+.++..
T Consensus       174 -~~-~a~~~a~~l~~~~~~a~~~~K~~l~~~  202 (243)
T PRK07854        174 -LA-DAQAWAAEIAGLAPLALQHAKRVLNDD  202 (243)
T ss_pred             -HH-HHHHHHHHHHhCCHHHHHHHHHHHHcc
Confidence             33 789999999999999999999999764

>PRK08290 enoyl-CoA hydratase; Provisional

Probab=99.96  E-value=4.2e-29  Score=196.55  Aligned_cols=112  Identities=34%  Similarity=0.542  Sum_probs=105.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|+|++|+++||+||++++++|++||+++|+ |+ .+.+++++++|+.++++++++|++++++||+++||||+++|++
T Consensus       128 ~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~  205 (288)
T PRK08290        128 ACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-PG-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRD  205 (288)
T ss_pred             EeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-Cc-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHH
Confidence            999999999999999999999999999999999 44 3466789999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTE  147 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~  147 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....
T Consensus       206 ~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~  239 (288)
T PRK08290        206 ELEAETLELARRIAAMPPFGLRLTKRAVNQTLDA  239 (288)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999876543

>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional

Probab=99.96  E-value=1.6e-29  Score=203.08  Aligned_cols=115  Identities=28%  Similarity=0.393  Sum_probs=107.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|+++.| .++++++++|++++++||+++||||+++|++
T Consensus       110 ~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g-~~a~~llltG~~i~A~eA~~~GLv~~vv~~~  188 (342)
T PRK05617        110 IVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG-ALGTYLALTGARISAADALYAGLADHFVPSA  188 (342)
T ss_pred             EEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc-HHHHHHHHcCCCCCHHHHHHcCCcceecCHH
Confidence            999999999999999999999999999999999999999999999877 6899999999999999999999999999988


Q ss_pred             hHHHH--------------------------------------------------------------HHHHHHHHhcCCH
Q psy9281         114 KLLEE--------------------------------------------------------------TIKLAERIGEHSP  131 (152)
Q Consensus       114 ~l~~~--------------------------------------------------------------~~~~a~~l~~~~~  131 (152)
                      ++.+.                                                              +.+++++|++.||
T Consensus       189 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~~i~~~sp  268 (342)
T PRK05617        189 DLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTADTLRSRSP  268 (342)
T ss_pred             HHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHHHHHhCCc
Confidence            88776                                                              8899999999999


Q ss_pred             HHHHHHHHHHhccccCCC
Q psy9281         132 LIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       132 ~a~~~~K~~l~~~~~~~l  149 (152)
                      .+++.+|++++.....++
T Consensus       269 ~a~~~~k~~l~~~~~~~l  286 (342)
T PRK05617        269 TSLKVTLEQLRRARGLTL  286 (342)
T ss_pred             HHHHHHHHHHHHhcCCCH
Confidence            999999999987655443

>PRK08272 enoyl-CoA hydratase; Provisional

Probab=99.96  E-value=8.7e-29  Score=195.90  Aligned_cols=110  Identities=31%  Similarity=0.438  Sum_probs=103.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|.+|+.   ..+++++|+++|++++++|++++++||+++||||+++|++
T Consensus       137 ~a~GgG~~lalacD~~ias~~a~f~~pe~~~gg~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~  213 (302)
T PRK08272        137 YCVAGGTDIALHCDQVIAADDAKIGYPPTRVWGVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPE  213 (302)
T ss_pred             EeehhhHHHHHhCCEEEEeCCCEecCcchhcccCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHH
Confidence            9999999999999999999999999999998666642   3578899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+++.+++++|+..||.+++.+|+.++..+.
T Consensus       214 ~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~~~  246 (302)
T PRK08272        214 ELDERTERLVERIAAVPVNQLAMVKLAVNSALL  246 (302)
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999987654

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=99.96  E-value=5.5e-29  Score=193.25  Aligned_cols=113  Identities=27%  Similarity=0.350  Sum_probs=105.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++++++++++++ ..++++++++|++++++||+++|||+++++  
T Consensus       111 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~-~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~--  187 (260)
T PRK07827        111 HVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLS-PRAAARYYLTGEKFGAAEAARIGLVTAAAD--  187 (260)
T ss_pred             eeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhh-HHHHHHHHHhCCccCHHHHHHcCCcccchH--
Confidence            99999999999999999999999999999999999999999888764 569999999999999999999999999974  


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.++++++++.||.+++.+|+.+++.....+
T Consensus       188 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~  223 (260)
T PRK07827        188 DVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGF  223 (260)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCH
Confidence            588999999999999999999999999998765543

>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=99.96  E-value=2.3e-28  Score=189.29  Aligned_cols=108  Identities=24%  Similarity=0.227  Sum_probs=100.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+++ ..++++++|+.++++++++|++++++||+++||||+++|++
T Consensus       106 ~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~  184 (255)
T PRK07112        106 KVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHYMTLMTQPVTAQQAFSWGLVDAYGANS  184 (255)
T ss_pred             EEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCCceecCcH
Confidence            99999999999999999999999999999999999865 45699999999999999999999999999999999999865


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      +.  .+.+++++++..||.+++.+|+.++..
T Consensus       185 ~~--~~~~~a~~l~~~~p~a~~~~K~~~~~~  213 (255)
T PRK07112        185 DT--LLRKHLLRLRCLNKAAVARYKSYASTL  213 (255)
T ss_pred             HH--HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence            53  578899999999999999999999754

>KOG1679|consensus

Probab=99.95  E-value=3.8e-29  Score=185.64  Aligned_cols=142  Identities=32%  Similarity=0.490  Sum_probs=127.2

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh-------------hhhh----------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC-------------LKIW----------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~-------------~~~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +..||    +|+||++-...+..+.             +++.          .++|||++|+++||+|++.++++++++|
T Consensus        86 pgvFC----aGADLKER~~Ms~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvE  161 (291)
T KOG1679|consen   86 PGVFC----AGADLKERKTMSPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVE  161 (291)
T ss_pred             Cceee----cCcchHhhhcCCHHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccc
Confidence            45677    9999999877655443             1111          8999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc----hHHHHHHHHHHHHhcCCHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE----KLLEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~----~l~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                      ++++++|+.|++.+|+|.+|++.++++++|++.+++.||...|+||+++.+.    ...+++.+++++|..+.|.+++..
T Consensus       162 T~laiiPGaGGtQRLpR~vg~alaKELIftarvl~g~eA~~lGlVnhvv~qneegdaa~~kal~lA~eilp~gPiavr~a  241 (291)
T KOG1679|consen  162 TKLAIIPGAGGTQRLPRIVGVALAKELIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQKALELAREILPQGPIAVRLA  241 (291)
T ss_pred             cceeeecCCCccchhHHHHhHHHHHhHhhhheeccchhHHhcchHHHHHhcCccccHHHHHHHHHHHHhccCCchhhhHH
Confidence            9999999999999999999999999999999999999999999999999754    677889999999999999999999


Q ss_pred             HHHHhccccCCCC
Q psy9281         138 KEAVNIDDTEGLN  150 (152)
Q Consensus       138 K~~l~~~~~~~l~  150 (152)
                      |..++.....++.
T Consensus       242 KlAIn~G~evdia  254 (291)
T KOG1679|consen  242 KLAINLGMEVDIA  254 (291)
T ss_pred             HHHhccCceeccc
Confidence            9999998877664

>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.95  E-value=3.7e-28  Score=197.49  Aligned_cols=115  Identities=23%  Similarity=0.356  Sum_probs=105.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|. ++++++++|++++++||+++|||++++|++
T Consensus       115 ~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~-~a~~l~ltG~~i~a~eA~~~GLv~~vv~~~  193 (379)
T PLN02874        115 LVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGH-LGEYLALTGARLNGKEMVACGLATHFVPSE  193 (379)
T ss_pred             eEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHH-HHHHHHHcCCcccHHHHHHcCCccEEeCHH
Confidence            9999999999999999999999999999999999999999999999885 899999999999999999999999999988


Q ss_pred             hHHH---H----------------------------------------------------------------HHHHHHHH
Q psy9281         114 KLLE---E----------------------------------------------------------------TIKLAERI  126 (152)
Q Consensus       114 ~l~~---~----------------------------------------------------------------~~~~a~~l  126 (152)
                      ++.+   +                                                                +.++++.|
T Consensus       194 ~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A~~~a~~l  273 (379)
T PLN02874        194 KLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWIKETLKGL  273 (379)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHHHHHHHHH
Confidence            7765   2                                                                23788999


Q ss_pred             hcCCHHHHHHHHHHHhccccCCC
Q psy9281         127 GEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       127 ~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.||.+++.+|++++.....++
T Consensus       274 ~~~sP~al~~tk~~~~~~~~~~l  296 (379)
T PLN02874        274 RRSSPTGLKITLRSIREGRKQSL  296 (379)
T ss_pred             HhcChHHHHHHHHHHHHhccCCH
Confidence            99999999999999987655443

>PRK12478 enoyl-CoA hydratase; Provisional

Probab=99.95  E-value=4.9e-28  Score=191.32  Aligned_cols=109  Identities=22%  Similarity=0.267  Sum_probs=101.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccc-cccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIII-GTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~-G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++ |+++  ++.+  .+++|..++++++++|++++++||+++||||+++|+
T Consensus       122 ~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~--~~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~  197 (298)
T PRK12478        122 WCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW--LYRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPF  197 (298)
T ss_pred             EEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH--HHHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCH
Confidence            9999999999999999999999999999997 8875  2333  367999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      +++.+++.+++++++..||.+++.+|+.++....
T Consensus       198 ~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~  231 (298)
T PRK12478        198 ERLEARVAEVATELARIPLSQLQAQKLIVNQAYE  231 (298)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999987654

>PLN02267 enoyl-CoA hydratase/isomerase family protein

Probab=99.95  E-value=1.1e-27  Score=184.10  Aligned_cols=112  Identities=21%  Similarity=0.264  Sum_probs=101.3

Q ss_pred             hhchHHHHHHHHcCeeEec-CCeEEecccccccccCCccHHHHHHHHhCHHHH-HHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          34 IYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNA-MEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~-~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a-~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                      +|+|||++|+++||+||++ ++++|++||+++|+.++.+++.++++++|..++ ++++++|++++++||+++||||+++|
T Consensus       104 ~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~llltG~~~~a~eA~~~Glv~~vv~  183 (239)
T PLN02267        104 HASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDVLLRAAKLTAEEAVEMGIVDSAHD  183 (239)
T ss_pred             cchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHHHHcCCcCCHHHHHHCCCcceecC
Confidence            9999999999999999998 578999999999997444457789999999999 69999999999999999999999998


Q ss_pred             c-chHHHHHHHHHHHHhcC--CHHHHHHHHHHHhccc
Q psy9281         112 P-EKLLEETIKLAERIGEH--SPLIVTQVKEAVNIDD  145 (152)
Q Consensus       112 ~-~~l~~~~~~~a~~l~~~--~~~a~~~~K~~l~~~~  145 (152)
                      + +++.+++.++++++++.  ++.++..+|+.++...
T Consensus       184 ~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~~~~  220 (239)
T PLN02267        184 SAEETVEAAVRLGEELAARKWNGEVYASIRKSLLPEV  220 (239)
T ss_pred             CHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHH
Confidence            5 68999999999999987  6778999999998754

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.95  E-value=9.8e-28  Score=195.63  Aligned_cols=109  Identities=22%  Similarity=0.357  Sum_probs=104.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. .++++++||++++++||+++||||+++|++
T Consensus       143 ~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~-~a~~L~LTG~~i~A~eA~~~GLv~~vVp~~  221 (401)
T PLN02157        143 VTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGR-LGEYLGLTGLKLSGAEMLACGLATHYIRSE  221 (401)
T ss_pred             eEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhH-HHHHHHHcCCcCCHHHHHHcCCceEEeCHh
Confidence            9999999999999999999999999999999999999999999999996 899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      ++ +.+.+++.+++..+|.++..+|+.++..
T Consensus       222 ~l-~~~~~~~~~i~~~~p~av~~~k~~~~~~  251 (401)
T PLN02157        222 EI-PVMEEQLKKLLTDDPSVVESCLEKCAEV  251 (401)
T ss_pred             HH-HHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence            98 6788999999999999999999998765

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.95  E-value=8.1e-28  Score=202.70  Aligned_cols=118  Identities=21%  Similarity=0.286  Sum_probs=112.0

Q ss_pred             hhchHH-HHHHHHcCeeEec-------CCeEEecccccccccCCccHHHHHHHH-hCHHHHHHH--HHcCCCCCHHHHHH
Q psy9281          34 IYLGGG-CELAMMCDIIYAG-------EKAKFGQPEIIIGTMPGAGGTQRLTRA-AGKSNAMEI--CLTGNQFTAQEAKE  102 (152)
Q Consensus        34 ~a~G~G-~~lal~cD~ria~-------~~a~f~~pe~~~G~~p~~~~~~~l~~~-~g~~~a~~l--ll~g~~~~a~ea~~  102 (152)
                      +|+||| ++|+++||+||++       ++++|++||+++|++|+.+++++|+++ +|.++++++  +++|++++++||++
T Consensus       380 ~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~Gl~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~  459 (550)
T PRK08184        380 SCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNFGLYPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEE  459 (550)
T ss_pred             ceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccccCCCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHH
Confidence            899999 9999999999999       999999999999999999999999998 699999997  58999999999999


Q ss_pred             cCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCCC
Q psy9281         103 MGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNH  151 (152)
Q Consensus       103 ~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~  151 (152)
                      +||||+++|++++++++.++++++++.||.+++.+|++++....++++.
T Consensus       460 ~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~  508 (550)
T PRK08184        460 LGLVTAAPDDIDWEDEVRIALEERASLSPDALTGMEANLRFAGPETMET  508 (550)
T ss_pred             cCCcccccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCHHH
Confidence            9999999999999999999999999999999999999999887776653

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.95  E-value=1.5e-27  Score=200.65  Aligned_cols=118  Identities=20%  Similarity=0.249  Sum_probs=112.1

Q ss_pred             hhchHH-HHHHHHcCeeEe-------cCCeEEecccccccccCCccHHHHHHHHh-CHHHH--HHHHHcCCCCCHHHHHH
Q psy9281          34 IYLGGG-CELAMMCDIIYA-------GEKAKFGQPEIIIGTMPGAGGTQRLTRAA-GKSNA--MEICLTGNQFTAQEAKE  102 (152)
Q Consensus        34 ~a~G~G-~~lal~cD~ria-------~~~a~f~~pe~~~G~~p~~~~~~~l~~~~-g~~~a--~~lll~g~~~~a~ea~~  102 (152)
                      +|+||| ++|+++||+||+       +++++|++||+++|++|+++++++|++++ |.+++  ++++++|++++++||++
T Consensus       376 ~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~  455 (546)
T TIGR03222       376 SCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAER  455 (546)
T ss_pred             eEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHH
Confidence            799999 999999999999       89999999999999999999999999998 99888  55999999999999999


Q ss_pred             cCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCCC
Q psy9281         103 MGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNH  151 (152)
Q Consensus       103 ~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~  151 (152)
                      +||||+++|++++.+++.+++++++..||.+++.+|+.++.....+++.
T Consensus       456 ~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~  504 (546)
T TIGR03222       456 LGLVTAAPDDIDWEDEIRIALEERASFSPDALTGLEANLRFAGPETMET  504 (546)
T ss_pred             cCCcccccCchHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcChhh
Confidence            9999999999999999999999999999999999999999887776653

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

Probab=99.95  E-value=2.8e-27  Score=189.12  Aligned_cols=110  Identities=25%  Similarity=0.320  Sum_probs=104.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..+|++++++|++++++||+++|||++++|++
T Consensus       134 ~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA~EA~~~GLVd~VVp~~  213 (360)
T TIGR03200       134 MRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSAHKAKRLGIIMDVVPAL  213 (360)
T ss_pred             EeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcHHHHHHcCChheecCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             hH------------HHHHHHHHHHHhcCCHH--HHHHHHHHHhc
Q psy9281         114 KL------------LEETIKLAERIGEHSPL--IVTQVKEAVNI  143 (152)
Q Consensus       114 ~l------------~~~~~~~a~~l~~~~~~--a~~~~K~~l~~  143 (152)
                      ++            ++.+.++++.+...++.  +.+..|.++..
T Consensus       214 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~  257 (360)
T TIGR03200       214 KVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQ  257 (360)
T ss_pred             hcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhc
Confidence            88            78888889888888776  88999998876

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.94  E-value=6.3e-27  Score=203.00  Aligned_cols=116  Identities=37%  Similarity=0.672  Sum_probs=105.5

Q ss_pred             hhchHHHHHHHHcCeeEecCC--eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK--AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~--a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                      +|+|||++|+++||+||++++  ++|++||+++|++|++|++++|++++|..+|++++++|++++++||+++||||+++|
T Consensus       111 ~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~  190 (708)
T PRK11154        111 ACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVP  190 (708)
T ss_pred             eeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHHHHHHhCCcCCHHHHHHCCCCcEecC
Confidence            999999999999999999986  589999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHH-------------HhcCCHH----------------------HHHHHHHHHhccccCCC
Q psy9281         112 PEKLLEETIKLAER-------------IGEHSPL----------------------IVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       112 ~~~l~~~~~~~a~~-------------l~~~~~~----------------------a~~~~K~~l~~~~~~~l  149 (152)
                      ++++.+++.+++++             +++.+|.                      +...+|+.++.....++
T Consensus       191 ~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~  263 (708)
T PRK11154        191 HSILLEVAVELAKKGKPARRPLPVRERLLEGNPLGRALLFKQARKKTLAKTQGNYPAPERILDVVRTGLEKGM  263 (708)
T ss_pred             hHHHHHHHHHHHHhcCCccCcCCchhhhcccCchhHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHhcCCH
Confidence            99999999999988             4555553                      67888888887655444

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.94  E-value=1.6e-26  Score=200.53  Aligned_cols=96  Identities=39%  Similarity=0.624  Sum_probs=94.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..+|++++++|++++++||+++||||+++|++
T Consensus       112 ~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~llltG~~~~A~eA~~~GLv~~vv~~~  191 (715)
T PRK11730        112 YALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEWIAAGKDVRAEDALKVGAVDAVVAPE  191 (715)
T ss_pred             EeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHHCCCCeEecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC
Q psy9281         114 KLLEETIKLAERIGEH  129 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~  129 (152)
                      ++.+++.+++++++..
T Consensus       192 ~l~~~a~~~a~~la~~  207 (715)
T PRK11730        192 KLQEAALALLKQAIAG  207 (715)
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            9999999999999865

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase

Probab=99.94  E-value=2.1e-26  Score=186.99  Aligned_cols=108  Identities=26%  Similarity=0.449  Sum_probs=102.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|. .++++++||+++++.||+++||||+++|++
T Consensus       115 ~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~-~~~~l~LTG~~i~a~eA~~~GLv~~vv~~~  193 (381)
T PLN02988        115 IVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGF-FGEYVGLTGARLDGAEMLACGLATHFVPST  193 (381)
T ss_pred             eEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHH-HHHHHHHcCCCCCHHHHHHcCCceEecCHh
Confidence            9999999999999999999999999999999999999999999999997 689999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      ++.+.+.+++ +++..+|.++..+|+.++.
T Consensus       194 ~l~~~~~~la-~~~~~~p~~~~~~~~~~~~  222 (381)
T PLN02988        194 RLTALEADLC-RIGSNDPTFASTILDAYTQ  222 (381)
T ss_pred             HHHHHHHHHH-HhhccCHHHHHHHHHHhhc
Confidence            9999888888 7777888889999988764

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=99.94  E-value=2.7e-26  Score=198.77  Aligned_cols=101  Identities=40%  Similarity=0.709  Sum_probs=94.8

Q ss_pred             hhchHHHHHHHHcCeeEecCC--eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK--AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~--a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                      +|+|||++|+++||+||++++  ++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|
T Consensus       106 ~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~a~eA~~~GLV~~vv~  185 (699)
T TIGR02440       106 ACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVP  185 (699)
T ss_pred             EeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHcCCcCCHHHHHhCCCCcEecC
Confidence            999999999999999999976  799999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHH-------------HHhcCCHHHH
Q psy9281         112 PEKLLEETIKLAE-------------RIGEHSPLIV  134 (152)
Q Consensus       112 ~~~l~~~~~~~a~-------------~l~~~~~~a~  134 (152)
                      ++++.+++.++++             +++..+|.+.
T Consensus       186 ~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~~~a~  221 (699)
T TIGR02440       186 QSILLDTAVEMALKGKPIRKPLSLQERLLEGTPLGR  221 (699)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCccchhhhcccCchhH
Confidence            9999999999998             5666666653

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>KOG0016|consensus

Probab=99.93  E-value=2.1e-26  Score=174.76  Aligned_cols=140  Identities=30%  Similarity=0.408  Sum_probs=126.9

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh----------hhh---h-----------------hhchHHHHHHHHcCeeEecCCe
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC----------LKI---W-----------------IYLGGGCELAMMCDIIYAGEKA   55 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~---~-----------------~a~G~G~~lal~cD~ria~~~a   55 (152)
                      ++||    +|.|+..+......+.          ...   +                 +|+|.|+.+...||+|+|++++
T Consensus        63 ~~f~----sG~Df~~~~~~~~~d~~~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka  138 (266)
T KOG0016|consen   63 SYFC----SGLDFSPFAKALDDDANEESDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKA  138 (266)
T ss_pred             cEEe----eccccchhhhcCCCcccccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccce
Confidence            4677    9999998866543332          111   1                 9999999999999999999999


Q ss_pred             EEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHH
Q psy9281          56 KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVT  135 (152)
Q Consensus        56 ~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~  135 (152)
                      +|..|++++|+.|++++++++|++||...|.++++.|++++++||.+.|||+++++.+.+.+.++..+++++..+|.+++
T Consensus       139 ~F~TPfa~lGq~PEG~Ss~t~p~imG~~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~~v~~~ikq~s~l~p~sl~  218 (266)
T KOG0016|consen  139 WFQTPFAKLGQSPEGCSSVTLPKIMGSASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNEEVLKKIKQYSKLSPESLL  218 (266)
T ss_pred             EEeccchhcCCCCCcceeeeehHhhchhhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHHHHHHHHHHHhcCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccccCCC
Q psy9281         136 QVKEAVNIDDTEGL  149 (152)
Q Consensus       136 ~~K~~l~~~~~~~l  149 (152)
                      ..|++++....+.+
T Consensus       219 ~~K~L~rs~~k~~l  232 (266)
T KOG0016|consen  219 GMKKLLRSNIKEEL  232 (266)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999998766544

>KOG1681|consensus

Probab=99.92  E-value=5e-26  Score=170.25  Aligned_cols=116  Identities=34%  Similarity=0.578  Sum_probs=110.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhC-HHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAG-KSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g-~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|+|+.|..+||+|++++++.|+.-|+.+|+..+.|...+||+.+| .++++++.+|+++|++.||++.|||++++|+
T Consensus       136 ~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrvf~d  215 (292)
T KOG1681|consen  136 ACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLARELAFTARKFSADEALDSGLVSRVFPD  215 (292)
T ss_pred             hhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhhcCC
Confidence            999999999999999999999999999999999999999999999999 8999999999999999999999999999984


Q ss_pred             -chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         113 -EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       113 -~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                       ++++..+..+|+.|+.++|.++..||..++...+...
T Consensus       216 k~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv  253 (292)
T KOG1681|consen  216 KEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSV  253 (292)
T ss_pred             HHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhh
Confidence             7899999999999999999999999999987665543

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=99.91  E-value=1.5e-24  Score=188.14  Aligned_cols=95  Identities=38%  Similarity=0.621  Sum_probs=91.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++++++|++++++||+++||||+++|++
T Consensus       112 ~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~llltG~~~~A~eA~~~GLvd~vv~~~  191 (714)
T TIGR02437       112 IALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAEDALKVGAVDAVVTAD  191 (714)
T ss_pred             eeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCCcEeeChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhc
Q psy9281         114 KLLEETIKLAERIGE  128 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~  128 (152)
                      ++.+.+.++++++..
T Consensus       192 ~l~~~a~~~a~~~~~  206 (714)
T TIGR02437       192 KLGAAALQLLKDAIN  206 (714)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999977543

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

Probab=99.91  E-value=3.5e-24  Score=158.97  Aligned_cols=117  Identities=45%  Similarity=0.712  Sum_probs=104.5

Q ss_pred             cccccCCCCCCcchhhhhhhchhh-----h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEec
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ-----C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQ   59 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~-----~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~   59 (152)
                      .++||    +|+|++++.+.....     .       ...+             +|+|+|+.++++||+||++++++|++
T Consensus        53 ~~~Fs----~G~dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~  128 (195)
T cd06558          53 GKAFC----AGADLKELAALSDAGEEARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGL  128 (195)
T ss_pred             CCceE----eCcCHHHHhcccccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEec
Confidence            57899    999999886654321     1       1111             99999999999999999999999999


Q ss_pred             ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHH
Q psy9281          60 PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAER  125 (152)
Q Consensus        60 pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~  125 (152)
                      ||+++|+.|+.+..+++++++|.+.+++++++|++++++||+++|+|+++++.+++.+++.+++++
T Consensus       129 pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~~~a~~  194 (195)
T cd06558         129 PEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDEELLAAALELARR  194 (195)
T ss_pred             hhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCCeecChhHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999999988888875

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=99.91  E-value=2.6e-24  Score=187.15  Aligned_cols=119  Identities=35%  Similarity=0.607  Sum_probs=100.7

Q ss_pred             cccccCCCCCCcchhhhhhhch-hh----------hhhhh-------------hhchHHHHHHHHcCeeEecCC--eEEe
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKF-IQ----------CLKIW-------------IYLGGGCELAMMCDIIYAGEK--AKFG   58 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~-~~----------~~~~~-------------~a~G~G~~lal~cD~ria~~~--a~f~   58 (152)
                      .|+||    +|+||+++..... ..          .+..+             +|+|||++|+++||+||++++  ++|+
T Consensus        69 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fg  144 (737)
T TIGR02441        69 PGSFV----AGADIQMIAACKTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLG  144 (737)
T ss_pred             CCcce----eCcCHHHHhccCChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEe
Confidence            36899    9999999853111 00          11111             999999999999999999987  5899


Q ss_pred             cccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc-------------chHHHHHHHHHHH
Q psy9281          59 QPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP-------------EKLLEETIKLAER  125 (152)
Q Consensus        59 ~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~-------------~~l~~~~~~~a~~  125 (152)
                      +||+++|++|++|++++|++++|..+|++++++|++++++||+++||||+++|+             +++.+.+.++++.
T Consensus       145 lpEv~lGl~Pg~Ggt~rLprliG~~~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~  224 (737)
T TIGR02441       145 LPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQG  224 (737)
T ss_pred             cchhhhCCCCCccHhhhHHHhhCHHHHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999986             4466777777766


Q ss_pred             Hh
Q psy9281         126 IG  127 (152)
Q Consensus       126 l~  127 (152)
                      ++
T Consensus       225 l~  226 (737)
T TIGR02441       225 LA  226 (737)
T ss_pred             hh
Confidence            54

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=99.91  E-value=6.6e-24  Score=173.34  Aligned_cols=99  Identities=21%  Similarity=0.345  Sum_probs=90.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|+++.|. .++++++||++++++||+++||+|+++|++
T Consensus       148 ~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~-~g~~L~LTG~~i~a~eA~~~GLa~~~v~~~  226 (407)
T PLN02851        148 ITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGY-LGEYLALTGQKLNGVEMIACGLATHYCLNA  226 (407)
T ss_pred             EEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCH-HHHHHHHhCCcCCHHHHHHCCCceeecCHh
Confidence            9999999999999999999999999999999999999999999999997 499999999999999999999999999998


Q ss_pred             hHHHHHHHHHHHHhcCCHHHH
Q psy9281         114 KLLEETIKLAERIGEHSPLIV  134 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~  134 (152)
                      ++ +.+.+.+.++...++.++
T Consensus       227 ~l-~~l~~~l~~~~~~~~~~~  246 (407)
T PLN02851        227 RL-PLIEERLGKLLTDDPAVI  246 (407)
T ss_pred             hH-HHHHHHHHhhccCCHHHH
Confidence            87 567777777665555544

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=99.91  E-value=2.8e-24  Score=180.94  Aligned_cols=99  Identities=28%  Similarity=0.504  Sum_probs=94.1

Q ss_pred             hhchHHHHHHHHcCeeEecCC--eEEeccccc-ccccCCccHHHHHH--HHhCHHHHHHHHHcCCCCCHHHHHHcCCccc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK--AKFGQPEII-IGTMPGAGGTQRLT--RAAGKSNAMEICLTGNQFTAQEAKEMGVVSK  108 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~--a~f~~pe~~-~G~~p~~~~~~~l~--~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~  108 (152)
                      +|+|||++|+++||+||++++  ++|++||++ +|++|++++..+++  +++|..+|++++++|++++++||+++||||+
T Consensus       129 ~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~  208 (546)
T TIGR03222       129 TCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDE  208 (546)
T ss_pred             EeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCccchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceE
Confidence            999999999999999999986  799999997 99999999988887  6899999999999999999999999999999


Q ss_pred             cCCcchHHHHHHHHHHHHhcCCHH
Q psy9281         109 IFPPEKLLEETIKLAERIGEHSPL  132 (152)
Q Consensus       109 v~~~~~l~~~~~~~a~~l~~~~~~  132 (152)
                      ++|++++.+++.+++++++..||.
T Consensus       209 vv~~~~l~~~a~~lA~~la~~~p~  232 (546)
T TIGR03222       209 VVKPSQFDAAIAERAAELAAQSDR  232 (546)
T ss_pred             EeChHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999988763

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=99.91  E-value=4.5e-24  Score=180.07  Aligned_cols=99  Identities=27%  Similarity=0.471  Sum_probs=94.3

Q ss_pred             hhchHHHHHHHHcCeeEecCC--eEEeccccc-ccccCCccHHHHHH--HHhCHHHHHHHHHcCCCCCHHHHHHcCCccc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK--AKFGQPEII-IGTMPGAGGTQRLT--RAAGKSNAMEICLTGNQFTAQEAKEMGVVSK  108 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~--a~f~~pe~~-~G~~p~~~~~~~l~--~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~  108 (152)
                      +|+|||++|+++||+||++++  ++|++||++ +|++|+.++..+++  +++|+.++++++++|++++++||+++||||+
T Consensus       133 ~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~  212 (550)
T PRK08184        133 TCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPGTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDE  212 (550)
T ss_pred             EeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCCcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccE
Confidence            999999999999999999987  899999997 99999999998898  6799999999999999999999999999999


Q ss_pred             cCCcchHHHHHHHHHHHHhcCCHH
Q psy9281         109 IFPPEKLLEETIKLAERIGEHSPL  132 (152)
Q Consensus       109 v~~~~~l~~~~~~~a~~l~~~~~~  132 (152)
                      ++|++++.+++.+++++|+..||.
T Consensus       213 vv~~d~l~~~a~~~A~~ia~~~~~  236 (550)
T PRK08184        213 VVKPSKFDAKVAERAAELAAASDR  236 (550)
T ss_pred             eeCHHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999988764

>KOG1682|consensus

Probab=99.87  E-value=1.2e-22  Score=150.19  Aligned_cols=138  Identities=26%  Similarity=0.346  Sum_probs=122.3

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----hhhh--------------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----LKIW--------------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----~~~~--------------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      -|.||    +|.||+++.+....+.    +...                    ++..+|+.|..+||+++++++++|..|
T Consensus        86 GkifS----aGH~LKELt~e~g~d~haevFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tP  161 (287)
T KOG1682|consen   86 GKIFS----AGHNLKELTNEPGSDIHAEVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTP  161 (287)
T ss_pred             Ccccc----ccccHHHhhcCccchHHHHHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCC
Confidence            36899    9999999976543322    1111                    888999999999999999999999999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      ..++|++....+.. +.|.+++..+.+|++||.+++++||+..|||++++|+++++.++.++.+.|...++..+...|..
T Consensus       162 G~~vGlFCSTPGvA-laRavpRkva~~ML~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~~i~~~i~~~srav~slgk~f  240 (287)
T KOG1682|consen  162 GAGVGLFCSTPGVA-LARAVPRKVAAYMLMTGLPITGEEALISGLVSKVVPAEELDKEIEEITNAIKAKSRAVISLGKEF  240 (287)
T ss_pred             CCceeeEecCcchh-HhhhcchhHHHHHHHhCCCCchHHHHHhhhhhhcCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            99999998887777 99999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HhccccC
Q psy9281         141 VNIDDTE  147 (152)
Q Consensus       141 l~~~~~~  147 (152)
                      .+.+...
T Consensus       241 ~y~q~~m  247 (287)
T KOG1682|consen  241 YYKQLAM  247 (287)
T ss_pred             HHHHHHH
Confidence            8765543

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

Probab=99.83  E-value=4.9e-21  Score=142.64  Aligned_cols=111  Identities=34%  Similarity=0.563  Sum_probs=105.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +++|||=.|-+.||+.||+++++|+....++|-+-++.++..|.+.+|.++|+++.+.|+.++|+||+++|+||.|+|-+
T Consensus       126 ~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~  205 (282)
T COG0447         126 YAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQKKAREIWFLCRQYDAEEALDMGLVNTVVPHA  205 (282)
T ss_pred             EeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhhhhHHhhhhhhhccHHHHHhcCceeeeccHH
Confidence            99999999999999999999999999999999877666666699999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      +|+++..++++++..+||.+++..|.++|..
T Consensus       206 ~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad  236 (282)
T COG0447         206 DLEKETVQWAREMLAKSPTALRMLKAAFNAD  236 (282)
T ss_pred             HHHHHHHHHHHHHHhcChHHHHHHHHHhcCC
Confidence            9999999999999999999999999999864

>KOG1684|consensus

Probab=99.75  E-value=7e-19  Score=139.18  Aligned_cols=105  Identities=27%  Similarity=0.453  Sum_probs=89.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .++|||++|...--||||+|++.|.+||+.+|++|+.|++++++|+-| ....++.+||+++++.|++..||.++.||.+
T Consensus       145 ITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg-~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~  223 (401)
T KOG1684|consen  145 ITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG-YLGLYLGLTGQRLSGADALRCGLATHYVPSE  223 (401)
T ss_pred             eeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc-HHHHhhhhccceecchHHHHhcchhhccchh
Confidence            899999999999999999999999999999999999999999999988 6889999999999999999999999999988


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      ++..--.++.+.+..-|...+..+-+
T Consensus       224 ~l~~Lee~L~~~l~~dp~~~I~~~l~  249 (401)
T KOG1684|consen  224 KLPSLEERLLKNLNDDPQSVINETLE  249 (401)
T ss_pred             hhhHHHHHHhhhcCCCcHHHHHHHHH
Confidence            77655555554444434344444433

>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=99.52  E-value=2.9e-14  Score=105.89  Aligned_cols=107  Identities=17%  Similarity=0.149  Sum_probs=82.4

Q ss_pred             CCCCCcchhhhhhhch------hhh---hhh--hhhchHHHHHHHHcCeeEecCCeEEecccccccccCCc---------
Q psy9281          11 IDYEQKDLYRSKNLKF------IQC---LKI--WIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGA---------   70 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~------~~~---~~~--~~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~---------   70 (152)
                      |||-|+++..-.....      ...   +..  -+|+|+|+.++++||+++++++++|+.++...+..+..         
T Consensus        37 InSpGG~v~~~~~i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~  116 (187)
T cd07020          37 LDTPGGLLDSTREIVQAILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKI  116 (187)
T ss_pred             EECCCCCHHHHHHHHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHH
Confidence            5788988765433211      111   110  28999999999999999999999999999985544432         


Q ss_pred             -----cHHHHHHHHhCH--HHHHHHHHcCCCCCHHHHHHcCCccccCCcc-hHHH
Q psy9281          71 -----GGTQRLTRAAGK--SNAMEICLTGNQFTAQEAKEMGVVSKIFPPE-KLLE  117 (152)
Q Consensus        71 -----~~~~~l~~~~g~--~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~-~l~~  117 (152)
                           .....++++.|.  .++++++.+|+.++++||+++||||++++++ ++.+
T Consensus       117 ~~~~~~~~~~l~~~~G~~~~~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~~~~~~  171 (187)
T cd07020         117 LNDAVAYIRSLAELRGRNAEWAEKAVRESLSLTAEEALKLGVIDLIAADLNELLK  171 (187)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHHHHcCCeecHHHHHHcCCcccccCCHHHHHH
Confidence                 234468888887  7999999999999999999999999999875 5554

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c

>cd07014 S49_SppA Signal peptide peptidase A

Probab=99.37  E-value=9.3e-13  Score=96.86  Aligned_cols=84  Identities=15%  Similarity=0.160  Sum_probs=69.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHH--------HHHHHhC--HHHHHHHHHcCCCCCHHHHHHc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQ--------RLTRAAG--KSNAMEICLTGNQFTAQEAKEM  103 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~--------~l~~~~g--~~~a~~lll~g~~~~a~ea~~~  103 (152)
                      .|.|+|+.|+++||+++++++++|+.+....+..+......        .+++..|  +...++++..|+.++++||++.
T Consensus        81 ~a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~  160 (177)
T cd07014          81 NAASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKAN  160 (177)
T ss_pred             chhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHc
Confidence            89999999999999999999999999988777433222222        3445555  8889999999999999999999


Q ss_pred             CCccccCCcchHHH
Q psy9281         104 GVVSKIFPPEKLLE  117 (152)
Q Consensus       104 Glv~~v~~~~~l~~  117 (152)
                      ||||++.+.+++.+
T Consensus       161 GLVD~v~~~~e~~~  174 (177)
T cd07014         161 GLVDSLGSFDDAVA  174 (177)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999998777654

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p

>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=99.14  E-value=2.1e-10  Score=82.90  Aligned_cols=99  Identities=17%  Similarity=0.135  Sum_probs=72.1

Q ss_pred             CCCCCcchhhhhhhchhhh------hhhh--hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccH----------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC------LKIW--IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGG----------   72 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~------~~~~--~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~----------   72 (152)
                      |||-|+++..-......-.      ....  .|.++|+.++++||.|+++++++|.++....+..+....          
T Consensus        37 inspGG~~~~~~~i~~~i~~~~~pvi~~v~g~a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~  116 (160)
T cd07016          37 INSPGGDVFAGLAIYNALKRHKGKVTVKIDGLAASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDK  116 (160)
T ss_pred             EECCCCCHHHHHHHHHHHHhcCCCEEEEEcchHHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHH
Confidence            5668888765433211100      0000  899999999999999999999999997777665443321          


Q ss_pred             -----HHHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCcccc
Q psy9281          73 -----TQRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKI  109 (152)
Q Consensus        73 -----~~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v  109 (152)
                           ...+.+..|  ....++++..+..++++||+++||||++
T Consensus       117 ~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a~eA~~~GliD~v  160 (160)
T cd07016         117 IDESIANAYAEKTGLSEEEISALMDAETWLTAQEAVELGFADEI  160 (160)
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHhCCeECcHHHHHHcCCCCcC
Confidence                 223667778  6788888888888999999999999975

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=98.68  E-value=6.9e-09  Score=89.03  Aligned_cols=92  Identities=20%  Similarity=0.241  Sum_probs=72.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEE------eccc------ccccccCCccHHHHHHH-----------------------
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKF------GQPE------IIIGTMPGAGGTQRLTR-----------------------   78 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f------~~pe------~~~G~~p~~~~~~~l~~-----------------------   78 (152)
                      .|.+||..++++||.+++++++.+      +.+.      .++|+.++...+..+..                       
T Consensus       388 ~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~~~~~t~~~~~~~~~~l~~~y  467 (584)
T TIGR00705       388 MAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSLLRPLTAEDQAIMQLSVEAGY  467 (584)
T ss_pred             ccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            789999999999999999999876      5553      57888876554433332                       


Q ss_pred             -----HhCHHH-----HHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcC
Q psy9281          79 -----AAGKSN-----AMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH  129 (152)
Q Consensus        79 -----~~g~~~-----a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~  129 (152)
                           +++..+     ..+.+.+|+.++++||++.||||++-   .+ +++.+.+++++..
T Consensus       468 ~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig---~~-~~Ai~~a~~la~~  524 (584)
T TIGR00705       468 RRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALG---GL-DEAVAKAAKLAHC  524 (584)
T ss_pred             HHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCC---CH-HHHHHHHHHHcCC
Confidence                 555555     77888999999999999999999995   34 5677777777776

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease

Probab=98.62  E-value=1.2e-07  Score=68.30  Aligned_cols=99  Identities=17%  Similarity=0.104  Sum_probs=67.0

Q ss_pred             CCCCCcchhhhhhhchh------hhhhhh--hhchHHHHHHHHcCeeEecCCeEEecccccccccCCc--cH-----H--
Q psy9281          11 IDYEQKDLYRSKNLKFI------QCLKIW--IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGA--GG-----T--   73 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~------~~~~~~--~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~--~~-----~--   73 (152)
                      ++|.|.|+.........      ..+...  .|.++|+.|+++||.|++.+++.|+......+.....  ..     .  
T Consensus        36 ~~s~Gg~~~~~~~i~~~l~~~~kpvva~~~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l  115 (161)
T cd00394          36 VNTPGGRVDAGMNIVDALQASRKPVIAYVGGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRII  115 (161)
T ss_pred             EECCCcCHHHHHHHHHHHHHhCCCEEEEECChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHH
Confidence            35689988654332111      001111  8899999999999999999999999988876654322  00     0  


Q ss_pred             ----HHHHHH------hCHHHHHHHHHcCCCCCHHHHHHcCCcccc
Q psy9281          74 ----QRLTRA------AGKSNAMEICLTGNQFTAQEAKEMGVVSKI  109 (152)
Q Consensus        74 ----~~l~~~------~g~~~a~~lll~g~~~~a~ea~~~Glv~~v  109 (152)
                          ..+...      +......+.+..+..++++||++.||||++
T Consensus       116 ~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~a~eA~~~GLvD~i  161 (161)
T cd00394         116 LYFIARFISLVAENRGQTTEKLEEDIEKDLVLTAQEALEYGLVDAL  161 (161)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHhcCCcEEcHHHHHHcCCcCcC
Confidence                011111      233456778888999999999999999975

Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec

>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=98.35  E-value=1.7e-06  Score=63.88  Aligned_cols=105  Identities=22%  Similarity=0.196  Sum_probs=66.8

Q ss_pred             CCCCCcchhhhhhhchhhh------hhhh--hhchHHHHHHHHcCeeEecCCeEEecccccccccCCc----cHHHH---
Q psy9281          11 IDYEQKDLYRSKNLKFIQC------LKIW--IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGA----GGTQR---   75 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~------~~~~--~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~----~~~~~---   75 (152)
                      ||+-|+++.........-.      ...+  .|.++|+.++++||++++.+++.++.++.-.+-..+.    -....   
T Consensus        37 inspGG~v~~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v~~~~~~~~~~K~~~~~~~~  116 (178)
T cd07021          37 IDTPGGRVDSALEIVDLILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPIPGDGNGAADEKVQSYWRAK  116 (178)
T ss_pred             EECcCCCHHHHHHHHHHHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeEcCCCccchhHHHHHHHHHH
Confidence            4567777766544321111      0011  8999999999999999999999999985543211100    00111   


Q ss_pred             ---HHHHhC--HHHHHHHHHcC-------------CCCCHHHHHHcCCccccCCc-chH
Q psy9281          76 ---LTRAAG--KSNAMEICLTG-------------NQFTAQEAKEMGVVSKIFPP-EKL  115 (152)
Q Consensus        76 ---l~~~~g--~~~a~~lll~g-------------~~~~a~ea~~~Glv~~v~~~-~~l  115 (152)
                         +.++-|  ...+..|+-..             ..++++||++.|+++.++++ ++|
T Consensus       117 ~~~~A~~~gr~~~~a~~mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~~~~l  175 (178)
T cd07021         117 MRAAAEKKGRDPDIAEAMVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGSLDEL  175 (178)
T ss_pred             HHHHHHHhCCCHHHHHHHhhhhcccccccccccceeeeCHHHHHHhCCeEEEECCHHHH
Confidence               222223  55666776655             36999999999999999873 444

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.30  E-value=2.5e-07  Score=69.91  Aligned_cols=114  Identities=13%  Similarity=0.152  Sum_probs=69.6

Q ss_pred             CCCCcchhhhhhhchh-hhhhh--------h--hhchHHHHHHHHcCeeEecCCeEEeccccccccc----------CCc
Q psy9281          12 DYEQKDLYRSKNLKFI-QCLKI--------W--IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTM----------PGA   70 (152)
Q Consensus        12 ~caG~Dl~~~~~~~~~-~~~~~--------~--~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~----------p~~   70 (152)
                      +|.|+|+..+...... ..++.        .  +|.|+|+.|+++||++++++++.++    .+|+.          +..
T Consensus        47 ~s~Gg~~~~~~~~~~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~g----siGv~~~~~~~~~~l~k~  122 (211)
T cd07019          47 NSPGGSVTASEVIRAELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTG----SIGIFGVITTVENSLDSI  122 (211)
T ss_pred             cCCCcCHHHHHHHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEE----EeEEEEEcCCHHHHHHhc
Confidence            4599999876433211 00111        1  7889999999999999999999988    45543          222


Q ss_pred             cHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHH
Q psy9281          71 GGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK  138 (152)
Q Consensus        71 ~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K  138 (152)
                      |..+.+.+..|..++    ...+++|++  .+.++.+.+   +++.+...+.+.+-...++..++..+
T Consensus       123 Gv~~~~~~~~g~~k~----~~~~~~s~e--~r~~~~~~l---d~~~~~f~~~Va~~R~~~~~~l~~~~  181 (211)
T cd07019         123 GVHTDGVSTSPLADV----SITRALPPE--AQLGLQLSI---ENGYKRFITLVADARHSTPEQIDKIA  181 (211)
T ss_pred             CCceEEEEecCcccC----CCCCCCCHH--HHHHHHHHH---HHHHHHHHHHHHhhCCCCHHHHHHhc
Confidence            222222222344332    347777766  345555544   56666667777777777887766554

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type

Probab=98.19  E-value=1.3e-05  Score=60.39  Aligned_cols=109  Identities=20%  Similarity=0.194  Sum_probs=65.7

Q ss_pred             CCCCCcchhhhhhhchhh-hh-------hhh--hhchHHHHHHHHcCeeEecCCeEEeccccc------------ccccC
Q psy9281          11 IDYEQKDLYRSKNLKFIQ-CL-------KIW--IYLGGGCELAMMCDIIYAGEKAKFGQPEII------------IGTMP   68 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~-~~-------~~~--~a~G~G~~lal~cD~ria~~~a~f~~pe~~------------~G~~p   68 (152)
                      ++|.|+|+.........- .+       ...  .|.++|+.++++||.+++++++.++...+.            +|+-+
T Consensus        38 ~~s~Gg~~~~~~~l~~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~  117 (207)
T TIGR00706        38 INSPGGTVVASEEIYEKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEF  117 (207)
T ss_pred             ecCCCCCHHHHHHHHHHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceE
Confidence            456999986653322110 01       111  788999999999999999999876543332            23211


Q ss_pred             ------------Cc------cHHHHHH-----------------HHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          69 ------------GA------GGTQRLT-----------------RAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        69 ------------~~------~~~~~l~-----------------~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                                  .+      .....+.                 |.+.....++ +..++.+++++|++.||||++...+
T Consensus       118 ~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~~~~f~~~va~~R~~~~~~~~~-~~~~~~~~~~~A~~~gLvD~i~~~~  196 (207)
T TIGR00706       118 EVIKSGEYKDIGSPTRELTPEERDILQNLVNESYEQFVQVVAKGRNLPVEDVKK-FADGRVFTGRQALKLRLVDKLGTED  196 (207)
T ss_pred             EEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHH
Confidence                        00      0000111                 1122333333 4678899999999999999998766


Q ss_pred             hHHHHHH
Q psy9281         114 KLLEETI  120 (152)
Q Consensus       114 ~l~~~~~  120 (152)
                      ++.+...
T Consensus       197 ~~~~~~~  203 (207)
T TIGR00706       197 DALKWLA  203 (207)
T ss_pred             HHHHHHH
Confidence            6654443

The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.

>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=98.08  E-value=1.2e-05  Score=60.56  Aligned_cols=81  Identities=20%  Similarity=0.239  Sum_probs=51.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccc------------cccccCCcc------------------HHHHHHHHh---
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEI------------IIGTMPGAG------------------GTQRLTRAA---   80 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~------------~~G~~p~~~------------------~~~~l~~~~---   80 (152)
                      +|.|+|+.++++||.+++++++.|+....            ++|+-+...                  ....+...+   
T Consensus        76 ~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~~  155 (208)
T cd07023          76 VAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEERAILQALVDDI  155 (208)
T ss_pred             cchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHHHHHHHHHHHHH
Confidence            78999999999999999999987743211            122211110                  001111111   


Q ss_pred             ------------C--HHHHHHHHHcCCCCCHHHHHHcCCccccCCcchH
Q psy9281          81 ------------G--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL  115 (152)
Q Consensus        81 ------------g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l  115 (152)
                                  |  .... +-+..|..+++++|++.||||++...++.
T Consensus       156 ~~~f~~~Va~~R~~~~~~~-~~~~~~~~~~a~~A~~~gLiD~i~~~~~~  203 (208)
T cd07023         156 YDQFVDVVAEGRGMSGERL-DKLADGRVWTGRQALELGLVDELGGLDDA  203 (208)
T ss_pred             HHHHHHHHHhcCCCCHHHH-HHhcCCcEEEHHHHHHcCCCcccCCHHHH
Confidence                        1  1222 33567889999999999999999865443

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad

>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad

Probab=97.96  E-value=2e-05  Score=59.63  Aligned_cols=81  Identities=19%  Similarity=0.193  Sum_probs=52.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEeccccc------------ccccCCc----------------c--HHHHHHH-----
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEII------------IGTMPGA----------------G--GTQRLTR-----   78 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~------------~G~~p~~----------------~--~~~~l~~-----   78 (152)
                      .|.|+|+.++++||++++++++.|+...+-            +|+-+..                .  .-..+..     
T Consensus        83 ~a~s~gy~lA~~aD~i~a~~~a~~g~iG~~~~~~~~~~ll~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~re~~~~~l~~~  162 (214)
T cd07022          83 LAASAAYWIASAADRIVVTPTAGVGSIGVVASHVDQSKALEKAGLKVTLIFAGAHKVDGNPDEPLSDEARARLQAEVDAL  162 (214)
T ss_pred             chhhHHHHHHhcCCEEEEcCCCeEEeeeEEEecCCHHHHHHhCCCeEEEEEcCCCccCCCCCCCCCHHHHHHHHHHHHHH
Confidence            799999999999999999999986543322            2221100                0  0000111     


Q ss_pred             ------------HhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHH
Q psy9281          79 ------------AAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLL  116 (152)
Q Consensus        79 ------------~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~  116 (152)
                                  .+.....++++  |+.+++++|++.||||++...+++.
T Consensus       163 ~~~f~~~V~~~R~~~~~~~~~~~--~~~~~~~~Al~~gLvD~i~~~~~~~  210 (214)
T cd07022         163 YAMFVAAVARNRGLSAAAVRATE--GGVFRGQEAVAAGLADAVGTLDDAL  210 (214)
T ss_pred             HHHHHHHHHHhCCCCHHHHHHhh--cCeeeHHHHHHcCCCcccCCHHHHH
Confidence                        12233444555  9999999999999999998755543

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.

>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=97.94  E-value=5.2e-05  Score=55.67  Aligned_cols=79  Identities=19%  Similarity=0.214  Sum_probs=59.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCC----c-c---HHH------HHHHHhC--HHHHHHHHHcCCCCCH
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPG----A-G---GTQ------RLTRAAG--KSNAMEICLTGNQFTA   97 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~----~-~---~~~------~l~~~~g--~~~a~~lll~g~~~~a   97 (152)
                      .|..+|..++++||.+++.+++.++....-.|..+.    . .   ...      -+.+.-|  ...+..++.....+++
T Consensus        71 ~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~~~lta  150 (172)
T cd07015          71 SAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTP  150 (172)
T ss_pred             eehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhhcCcCH
Confidence            567899999999999999999999988875432220    0 0   011      1222334  5678888888999999


Q ss_pred             HHHHHcCCccccCCc
Q psy9281          98 QEAKEMGVVSKIFPP  112 (152)
Q Consensus        98 ~ea~~~Glv~~v~~~  112 (152)
                      +||+++|++|.+++.
T Consensus       151 ~EA~~~G~iD~ia~~  165 (172)
T cd07015         151 EEALKYGVIEVVARD  165 (172)
T ss_pred             HHHHHcCCceeeeCC
Confidence            999999999999974

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle

>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=97.89  E-value=4.5e-05  Score=57.28  Aligned_cols=102  Identities=15%  Similarity=0.070  Sum_probs=58.9

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccH--------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGG--------   72 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~--------   72 (152)
                      ||+-|+|+..-....+.-.     ...+   .|.++|..++++++  .|++.+++++.+....-|......-        
T Consensus        68 InSpGG~v~~g~~I~d~i~~~~~~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l  147 (200)
T PRK00277         68 INSPGGSVTAGLAIYDTMQFIKPDVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREI  147 (200)
T ss_pred             EECCCCcHHHHHHHHHHHHhcCCCEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHH
Confidence            5678888765332211100     1111   78888888888743  4666666665554332121100000        


Q ss_pred             -------HHHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          73 -------TQRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        73 -------~~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                             ...+.++.|  .....+++-.+.-++++||+++||||++++.
T Consensus       148 ~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~lsa~EA~e~GliD~Ii~~  196 (200)
T PRK00277        148 LKLKKRLNEILAEHTGQPLEKIEKDTDRDNFMSAEEAKEYGLIDEVLTK  196 (200)
T ss_pred             HHHHHHHHHHHHHHHCcCHHHHHHHhhCCccccHHHHHHcCCccEEeec
Confidence                   011333334  4566677777778999999999999999864

>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional

Probab=97.75  E-value=0.00022  Score=57.06  Aligned_cols=93  Identities=18%  Similarity=0.202  Sum_probs=58.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .+.|||......||++++.+++.++.      +.|.++++..+...   .++.+. ...-+++++++++.|+||+++|..
T Consensus       202 eggsGGAlal~~aD~V~m~e~a~~sV------isPEg~a~Il~~d~---~~a~~a-A~~~~ita~dL~~~giiD~ii~Ep  271 (322)
T CHL00198        202 EGGSGGALGIGIGDSIMMLEYAVYTV------ATPEACAAILWKDS---KKSLDA-AEALKITSEDLKVLGIIDEIIPEP  271 (322)
T ss_pred             cccHHHHHhhhcCCeEEEeCCeEEEe------cCHHHHHHHHhcch---hhHHHH-HHHcCCCHHHHHhCCCCeEeccCC
Confidence            67677765556699999999987765      33444444433332   233332 233479999999999999999721


Q ss_pred             ------h-------HHHHHHHHHHHHhcCCHHHHHH
Q psy9281         114 ------K-------LLEETIKLAERIGEHSPLIVTQ  136 (152)
Q Consensus       114 ------~-------l~~~~~~~a~~l~~~~~~a~~~  136 (152)
                            +       +.+...+....+...++..+..
T Consensus       272 ~ggah~~~~~~~~~l~~~~~~~l~~l~~~~~~~l~~  307 (322)
T CHL00198        272 IGGAQADPASASKILKKKLIRQLDFLKILSPSELKA  307 (322)
T ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence                  1       2233344445556666665433

>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=97.73  E-value=0.0002  Score=54.08  Aligned_cols=102  Identities=17%  Similarity=0.142  Sum_probs=66.4

Q ss_pred             CCCCCcchhhhhhhchhh-----hhhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccc-cccCCccH-------
Q psy9281          11 IDYEQKDLYRSKNLKFIQ-----CLKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIII-GTMPGAGG-------   72 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~-----~~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~-G~~p~~~~-------   72 (152)
                      |||-|+|+..-......-     ....+   .|.++|..++++||  .|++.+++.|.+..... |..-+...       
T Consensus        72 INSpGG~v~~g~~I~d~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~~G~a~d~~~~~~  151 (207)
T PRK12553         72 INSPGGSVTAGDAIYDTIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGIRGQASDLEIQAR  151 (207)
T ss_pred             EeCCCCcHHHHHHHHHHHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCCCccCHHHHHHHHH
Confidence            567888886643321110     01111   78889999999999  58999999988876543 21111000       


Q ss_pred             ---------HHHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          73 ---------TQRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        73 ---------~~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                               ...+.++.|  .....+++-.+.-++++||+++||||++++.
T Consensus       152 ~l~~~~~~~~~~ya~~tg~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~  202 (207)
T PRK12553        152 EILRMRERLERILAEHTGQSVEKIRKDTDRDKWLTAEEAKDYGLVDQIITS  202 (207)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCccccHHHHHHcCCccEEcCc
Confidence                     112333333  5666777778889999999999999999963

>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=97.63  E-value=0.00035  Score=50.72  Aligned_cols=99  Identities=16%  Similarity=0.097  Sum_probs=58.9

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHHH------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQ------   74 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~~------   74 (152)
                      |||-|+++..-......-.     +..+   .|.++|..+++++|  .|++.+++++.+....-+......-..      
T Consensus        37 InSpGG~v~~~~~i~~~i~~~~~~v~~~~~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l  116 (162)
T cd07013          37 INSPGGDVFAGMAIYDTIKFIKADVVTIIDGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLL  116 (162)
T ss_pred             EECCCCcHHHHHHHHHHHHhcCCCceEEEEeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHH
Confidence            6678888765433211100     1111   78899999999999  688888888776433222111100000      


Q ss_pred             ---------HHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCcccc
Q psy9281          75 ---------RLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKI  109 (152)
Q Consensus        75 ---------~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v  109 (152)
                               .+.+..|  ....++++-.+.-++++||+++||||++
T Consensus       117 ~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa~eA~~~GliD~i  162 (162)
T cd07013         117 LKVEGNLVSAYAHKTGQSEEELHADLERDTWLSAREAVEYGFADTI  162 (162)
T ss_pred             HHHHHHHHHHHHHHhCcCHHHHHHHHcCCccccHHHHHHcCCCCcC
Confidence                     1222223  4556666666666799999999999975

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas

>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional

Probab=97.63  E-value=0.0004  Score=54.06  Aligned_cols=93  Identities=19%  Similarity=0.235  Sum_probs=58.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .|.|||......||++++.+++.++.      +.|...+...+...--...+.+.+    ++++.++.+.|+||+++|..
T Consensus       146 ~~~gGgA~a~~~~D~v~m~~~a~~~v------~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD~ii~e~  215 (256)
T PRK12319        146 EGGSGGALALAVADQVWMLENTMYAV------LSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVDKVIPEH  215 (256)
T ss_pred             CcCcHHHHHhhcCCEEEEecCceEEE------cCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCcEecCCC
Confidence            77788888888999999999887665      233333333232221122333333    68999999999999999732


Q ss_pred             ---------hHHHHHHHHHHHHhcCCHHHHHH
Q psy9281         114 ---------KLLEETIKLAERIGEHSPLIVTQ  136 (152)
Q Consensus       114 ---------~l~~~~~~~a~~l~~~~~~a~~~  136 (152)
                               .+.+.+.+....+...|+..+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~  247 (256)
T PRK12319        216 GYFSSEIIDMIKKNLIEELAQLSQKPLEQLLE  247 (256)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence                     12333444555556666665433

>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional

Probab=97.61  E-value=0.00035  Score=57.60  Aligned_cols=95  Identities=22%  Similarity=0.196  Sum_probs=57.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .+.+||..-...+|+++|.+++.++.      +.|.++++..+....-...+.+    .-++++.++++.|+||+++|..
T Consensus       269 eGgSGGAlalg~aD~VlMle~A~ysV------isPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~II~Ep  338 (431)
T PLN03230        269 EGGSGGALAIGCGNRMLMMENAVYYV------ASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEIVPEP  338 (431)
T ss_pred             CCCcHHHHHhhcCCEEEEecCCEEEe------cCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEeccCC
Confidence            44445544445689999999887654      2344445544444332333333    3389999999999999999731


Q ss_pred             ------h-------HHHHHHHHHHHHhcCCHHHHHHHH
Q psy9281         114 ------K-------LLEETIKLAERIGEHSPLIVTQVK  138 (152)
Q Consensus       114 ------~-------l~~~~~~~a~~l~~~~~~a~~~~K  138 (152)
                            +       +.+.+.+....+...++..+...+
T Consensus       339 ~ggAh~d~~~~~~~l~~~i~~~l~~L~~~~~~~l~~~R  376 (431)
T PLN03230        339 LGGAHSDPLQASKNIKEVILRHMKELMKMDPEELLQDR  376 (431)
T ss_pred             CCCcccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence                  1       223344455556667776654433

>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=97.58  E-value=0.00041  Score=52.01  Aligned_cols=106  Identities=11%  Similarity=0.054  Sum_probs=63.7

Q ss_pred             CCCCCcchhhhhhhchhh-----hhhhh---hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHH-------
Q psy9281          11 IDYEQKDLYRSKNLKFIQ-----CLKIW---IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGT-------   73 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~-----~~~~~---~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~-------   73 (152)
                      |||-|+|+..-......-     .+..+   .|..+|..++++||.  |++.+++++..-...-+......-.       
T Consensus        60 INSpGG~v~ag~aI~d~i~~~~~~V~t~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l  139 (197)
T PRK14512         60 IDSEGGDIDAGFAIFNMIRFVKPKVFTIGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANEL  139 (197)
T ss_pred             EECCCCCHHHHHHHHHHHHhCCCCEEEEEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHH
Confidence            567888876533221110     01111   788889999999986  8999988876544432221111100       


Q ss_pred             --------HHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCCc-chHH
Q psy9281          74 --------QRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPP-EKLL  116 (152)
Q Consensus        74 --------~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~-~~l~  116 (152)
                              ..+.++-|  .....+++-...-++++||+++||||++++. +++.
T Consensus       140 ~~~~~~i~~~~a~~tg~~~~~i~~~~~~d~~lta~EA~~yGliD~I~~~~~~l~  193 (197)
T PRK14512        140 NKVKSELNDIIAKETGQELDKVEKDTDRDFWLDSSSAVKYGLVFEVVETRLELE  193 (197)
T ss_pred             HHHHHHHHHHHHHHhCcCHHHHHHhhhcCcccCHHHHHHcCCccEeecCcHHhH
Confidence                    01122223  3456666666777999999999999999974 4443

>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit

Probab=97.56  E-value=0.00053  Score=51.52  Aligned_cols=103  Identities=12%  Similarity=-0.024  Sum_probs=64.6

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHH-------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGT-------   73 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~-------   73 (152)
                      |||-|+|+..-....+.-.     +..+   .|.+.|..+++++|  -|++.++++|.+-....|..-+...-       
T Consensus        67 INSpGG~v~~g~aIyd~m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~  146 (200)
T CHL00028         67 INSPGGSVISGLAIYDTMQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEE  146 (200)
T ss_pred             EeCCCcchhhHHHHHHHHHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHH
Confidence            6678888765332211100     1111   77788889999998  59999999988877655521111100       


Q ss_pred             ---------HHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          74 ---------QRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        74 ---------~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                               ..+.++.|  .....+.+-...-++|+||+++||||+++++.
T Consensus       147 l~~~~~~~~~~ya~~Tg~~~e~i~~~~~r~~~lta~EA~eyGliD~I~~~~  197 (200)
T CHL00028        147 LLKLRETITRVYAQRTGKPLWVISEDMERDVFMSATEAKAYGIVDLVAVNN  197 (200)
T ss_pred             HHHHHHHHHHHHHHHHCcCHHHHHHHhhcCccCCHHHHHHcCCCcEEeecC
Confidence                     11222223  34555666666779999999999999998643

>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

Probab=97.47  E-value=0.00078  Score=58.91  Aligned_cols=95  Identities=17%  Similarity=0.101  Sum_probs=58.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .|.|||......||+++|.+++.++.      +.|.++++..|...-   ++.+ ....-+++++++++.|+||.++|..
T Consensus       290 eggSGGAlA~g~aD~VlMle~A~~sV------isPEgaAsILwkd~~---~A~e-AAe~lkiTa~dL~~lGiiD~IIpEp  359 (762)
T PLN03229        290 EGGSGGALAIGCANKLLMLENAVFYV------ASPEACAAILWKSAK---AAPK-AAEKLRITAQELCRLQIADGIIPEP  359 (762)
T ss_pred             CcchHHHHHhhcCCEEEEecCCeEEe------cCHHHHHHHHhcCcc---cHHH-HHHHcCCCHHHHHhCCCCeeeccCC
Confidence            77777877777799999998876544      234444443333222   2222 2334479999999999999999731


Q ss_pred             ------h-------HHHHHHHHHHHHhcCCHHHHHHHH
Q psy9281         114 ------K-------LLEETIKLAERIGEHSPLIVTQVK  138 (152)
Q Consensus       114 ------~-------l~~~~~~~a~~l~~~~~~a~~~~K  138 (152)
                            +       +..........+...++..+...+
T Consensus       360 ~ggAh~d~~~~~~~l~~~i~~~L~~l~~~~~~~l~~~R  397 (762)
T PLN03229        360 LGGAHADPSWTSQQIKIAINENMDELGKMDTEELLKHR  397 (762)
T ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence                  1       223334444555666776654443

>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP

Probab=97.41  E-value=0.0011  Score=49.50  Aligned_cols=101  Identities=13%  Similarity=0.052  Sum_probs=62.3

Q ss_pred             CCCCCcchhhhhhhchhh-----hhhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHH-------
Q psy9281          11 IDYEQKDLYRSKNLKFIQ-----CLKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGT-------   73 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~-----~~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~-------   73 (152)
                      |||-|+|+..-......-     .+..+   .|..+|..+++++|  .|++.++++|.+-+..-|......-.       
T Consensus        63 InSpGG~v~~g~~I~d~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l  142 (191)
T TIGR00493        63 INSPGGSITAGLAIYDTMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEI  142 (191)
T ss_pred             EECCCCCHHHHHHHHHHHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHH
Confidence            567888876543221110     01111   67777777777665  59999999988866543321111111       


Q ss_pred             --------HHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          74 --------QRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        74 --------~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                              ..+.++-|  .....+.+-.+.-++++||+++||||+++.
T Consensus       143 ~~~~~~~~~~ya~~tg~~~~~i~~~~~~~~~lta~EA~~~GliD~ii~  190 (191)
T TIGR00493       143 LRLKGLLNDILANHTGQSLEQIEKDTERDFFMSAEEAKEYGLIDSVLT  190 (191)
T ss_pred             HHHHHHHHHHHHHHHCcCHHHHHHHhhCCccCcHHHHHHcCCccEEec
Confidence                    01233333  456667777778899999999999999874

This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.

>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad

Probab=97.38  E-value=0.00049  Score=52.35  Aligned_cols=84  Identities=19%  Similarity=0.115  Sum_probs=54.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccc------------cccCC---------ccHHH-----------HHHH---
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIII------------GTMPG---------AGGTQ-----------RLTR---   78 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~------------G~~p~---------~~~~~-----------~l~~---   78 (152)
                      .+.++|+.++++||.+++.+.+.++...+..            |+-+.         .+..+           .+..   
T Consensus        87 ~~~sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~l~  166 (222)
T cd07018          87 GYSQGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQALLD  166 (222)
T ss_pred             CCCchhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHHHH
Confidence            6788999999999999999999888753321            21110         00000           0111   


Q ss_pred             --------------HhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHH
Q psy9281          79 --------------AAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEE  118 (152)
Q Consensus        79 --------------~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~  118 (152)
                                    .+.....++ +..|+.+++++|++.||||++...+++.+.
T Consensus       167 ~~~~~f~~~Va~~R~~~~~~~~~-~~~~~~~~~~~A~~~GLvD~i~~~~e~~~~  219 (222)
T cd07018         167 SLWDQYLADVAASRGLSPDALEA-LIDLGGDSAEEALEAGLVDGLAYRDELEAR  219 (222)
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHH-HHHcCCcHHHHHHHCCCCCcCCcHHHHHHH
Confidence                          112233333 345899999999999999999976666543

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys

>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.36  E-value=0.00014  Score=53.41  Aligned_cols=101  Identities=17%  Similarity=0.162  Sum_probs=62.7

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ------   74 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~------   74 (152)
                      |||-|+|+..-......-.     +..+   .|..+|..++++||.  |++.+++.|.+-+...+.........      
T Consensus        53 INSpGG~v~~g~~i~~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l  132 (182)
T PF00574_consen   53 INSPGGDVDAGLAIYDAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKEL  132 (182)
T ss_dssp             EEECEBCHHHHHHHHHHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHH
T ss_pred             EcCCCCccHHHHHHHHHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHH
Confidence            5678888866433211100     1111   788899999999999  89999999988888665433111110      


Q ss_pred             ---------HHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          75 ---------RLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        75 ---------~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                               .+.++.|  .....+++-...-++++||+++||||+++.
T Consensus       133 ~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~l~a~EA~~~GiiD~I~~  180 (182)
T PF00574_consen  133 EKLNERIANIYAERTGLSKEEIEELMDRDTWLSAEEALEYGIIDEIIE  180 (182)
T ss_dssp             HHHHHHHHHHHHHHHTS-HHHHHHHCSSTEEEEHHHHHHHTSSSEEES
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHhCCccccHHHHHHcCCCCEecc
Confidence                     1122223  445556655556689999999999999975

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....

>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=97.31  E-value=0.00058  Score=49.90  Aligned_cols=76  Identities=21%  Similarity=0.183  Sum_probs=54.6

Q ss_pred             hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccH---------------HHHHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGG---------------TQRLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~---------------~~~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|.++|..+++++|  .|++.+++.|.+-+...+..-...-               ...+.++.|  .....+++-.+.-
T Consensus        77 ~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~  156 (171)
T cd07017          77 LAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRDRY  156 (171)
T ss_pred             EehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCCcc
Confidence            78899999999999  7999999998887766554322100               001222223  3466677777888


Q ss_pred             CCHHHHHHcCCcccc
Q psy9281          95 FTAQEAKEMGVVSKI  109 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v  109 (152)
                      ++++||+++|+||+|
T Consensus       157 lta~EA~e~GiiD~V  171 (171)
T cd07017         157 MSAEEAKEYGLIDKI  171 (171)
T ss_pred             ccHHHHHHcCCCccC
Confidence            999999999999975

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ

>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=97.20  E-value=0.0026  Score=48.57  Aligned_cols=78  Identities=17%  Similarity=0.090  Sum_probs=53.4

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH---------------HHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ---------------RLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~---------------~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|.+.|..|++++|.  |++.+++++.+-...-|......-..               .+.++.|  .....+.+-...-
T Consensus       122 ~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~~~rd~w  201 (221)
T PRK14514        122 MAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWADSDRDYW  201 (221)
T ss_pred             EehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCcc
Confidence            778888999999996  89999999877665543321111010               1122334  3455566666777


Q ss_pred             CCHHHHHHcCCccccCC
Q psy9281          95 FTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~  111 (152)
                      ++|+||+++||||+|++
T Consensus       202 mtA~EA~eyGliD~Vi~  218 (221)
T PRK14514        202 MTAQEAKEYGMIDEVLI  218 (221)
T ss_pred             CCHHHHHHcCCccEEee
Confidence            99999999999999985

>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=97.18  E-value=0.0028  Score=47.65  Aligned_cols=102  Identities=15%  Similarity=0.134  Sum_probs=64.9

Q ss_pred             CCCCCCcchhhhhhhchhh-----hhhhh---hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH-----
Q psy9281          10 LIDYEQKDLYRSKNLKFIQ-----CLKIW---IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ-----   74 (152)
Q Consensus        10 ~~~caG~Dl~~~~~~~~~~-----~~~~~---~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~-----   74 (152)
                      .|||.|+|+..-....+.-     .+..+   .|.+.|..+++++|-  |++.+++++-+-....|..  +....     
T Consensus        63 ~INSpGG~v~~GlaIyd~m~~~~~~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a  140 (201)
T PRK14513         63 YINCPGGEVYAGLAIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQA  140 (201)
T ss_pred             EEECCCCchhhHHHHHHHHHhcCCCEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHH
Confidence            3677898886543321110     01111   777888889999996  9999999987766654431  11111     


Q ss_pred             ------------HHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          75 ------------RLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        75 ------------~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                                  .+.++.|  ...-.+++-...-++|+||+++||||+++++.
T Consensus       141 ~el~~~~~~l~~iya~~Tg~~~~~I~~~~~rd~~msa~EA~eyGliD~I~~~~  193 (201)
T PRK14513        141 KEVLFLRDTLVDIYHRHTDLPHEKLLRDMERDYFMSPEEAKAYGLIDSVIEPT  193 (201)
T ss_pred             HHHHHHHHHHHHHHHHHHCcCHHHHHHHhccCcccCHHHHHHcCCCcEEeccC
Confidence                        1122333  34455566556669999999999999999753

>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit

Probab=97.12  E-value=0.0025  Score=50.98  Aligned_cols=93  Identities=19%  Similarity=0.178  Sum_probs=55.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .|.|||..-...||++++.+++.++.      +.|.++++..+...   .++.+..- -.++++.++.+.|+||+++|..
T Consensus       199 eggsGGAla~~~aD~v~m~~~a~~sV------isPEg~a~Il~kd~---~~a~~aae-~~~~ta~~l~~~G~iD~II~ep  268 (316)
T TIGR00513       199 EGGSGGALAIGVGDKVNMLEYSTYSV------ISPEGCAAILWKDA---SKAPKAAE-AMKITAPDLKELGLIDSIIPEP  268 (316)
T ss_pred             ccccHHHhhhccCCEEEEecCceEEe------cCHHHHHHHhccch---hhHHHHHH-HccCCHHHHHHCCCCeEeccCC
Confidence            66666665555699999998887654      23444444333322   12222222 2568999999999999999721


Q ss_pred             ------h-------HHHHHHHHHHHHhcCCHHHHHH
Q psy9281         114 ------K-------LLEETIKLAERIGEHSPLIVTQ  136 (152)
Q Consensus       114 ------~-------l~~~~~~~a~~l~~~~~~a~~~  136 (152)
                            +       +.+...+....+...++..+..
T Consensus       269 ~~ga~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l~~  304 (316)
T TIGR00513       269 LGGAHRNPLAAAASLKEQLLADLATLDQLSTEELKN  304 (316)
T ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence                  1       2233344455556666665433

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated

Probab=97.09  E-value=0.0037  Score=50.15  Aligned_cols=94  Identities=22%  Similarity=0.241  Sum_probs=56.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .+.|||..-...||++++.+++.++.       .++-+++..+-+.  ..++.+..- ..++++.++.+.|+||+|+|..
T Consensus       199 eg~sGGAla~~~aD~v~m~~~A~~sv-------isPEg~a~Il~~~--~~~a~~aae-~~~ita~~l~~~g~iD~II~Ep  268 (319)
T PRK05724        199 EGGSGGALAIGVGDRVLMLEYSTYSV-------ISPEGCASILWKD--ASKAPEAAE-AMKITAQDLKELGIIDEIIPEP  268 (319)
T ss_pred             CccHHHHHHHhccCeeeeecCceEee-------cCHHHHHHHHhcC--chhHHHHHH-HcCCCHHHHHHCCCceEeccCC
Confidence            66667765555699999888876554       3433333323222  223333333 5569999999999999999731


Q ss_pred             ------h-------HHHHHHHHHHHHhcCCHHHHHHH
Q psy9281         114 ------K-------LLEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus       114 ------~-------l~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                            +       +.+...+....+...++..+...
T Consensus       269 ~gga~~~~~~~~~~l~~~i~~~l~~l~~~~~~~l~~~  305 (319)
T PRK05724        269 LGGAHRDPEAAAAALKEALLEALAELKGLSPEELLER  305 (319)
T ss_pred             CCCccCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence                  2       22333444455556676655443

>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=96.95  E-value=0.0064  Score=45.56  Aligned_cols=80  Identities=14%  Similarity=0.072  Sum_probs=52.6

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH---------------HHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ---------------RLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~---------------~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|.+.|..+++++|.  |++.+++++.+-...-|..-...-..               .+.++.|  .....+.+-.-.-
T Consensus        93 ~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~rd~~  172 (196)
T PRK12551         93 LAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDRDFF  172 (196)
T ss_pred             EehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCcC
Confidence            777888888899885  88999998777665433211110010               1222333  3345566666667


Q ss_pred             CCHHHHHHcCCccccCCcc
Q psy9281          95 FTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~~~  113 (152)
                      ++|+||+++||||++++..
T Consensus       173 msa~EA~eyGliD~I~~~~  191 (196)
T PRK12551        173 MSPSEAVEYGLIDLVIDKR  191 (196)
T ss_pred             CCHHHHHHcCCCcEEeccC
Confidence            9999999999999999753

>PRK12552 ATP-dependent Clp protease-like protein; Reviewed

Probab=96.29  E-value=0.025  Score=43.20  Aligned_cols=77  Identities=18%  Similarity=0.122  Sum_probs=51.0

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH-----------------HHHHHhC--HHHHHHHHHcC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ-----------------RLTRAAG--KSNAMEICLTG   92 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~-----------------~l~~~~g--~~~a~~lll~g   92 (152)
                      .|.+.|..|++++|-  |++.+++++-+-....|..  +.+.-                 .+.++.|  ...-.+.+-.-
T Consensus       117 ~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~d~~rd  194 (222)
T PRK12552        117 QAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSKDTDRM  194 (222)
T ss_pred             ehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHhcCC
Confidence            777888889999996  8899999987766654431  11111                 1111223  23333444444


Q ss_pred             CCCCHHHHHHcCCccccCCc
Q psy9281          93 NQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        93 ~~~~a~ea~~~Glv~~v~~~  112 (152)
                      .-+||+||+++||||+++.+
T Consensus       195 ~wmsA~EA~eyGliD~Ii~~  214 (222)
T PRK12552        195 FYLTPQEAKEYGLIDRVLES  214 (222)
T ss_pred             CcCCHHHHHHcCCCcEEecc
Confidence            55999999999999999864

>TIGR03133 malonate_beta malonate decarboxylase, beta subunit

Probab=96.04  E-value=0.037  Score=43.56  Aligned_cols=78  Identities=14%  Similarity=0.155  Sum_probs=48.0

Q ss_pred             hchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCH--HHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          35 YLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGK--SNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        35 a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~--~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      |+||+..++..||++|+++++++++...+           ......|.  -...+--+.-+.+.+......|++|.++++
T Consensus       149 c~GG~a~~a~l~D~vim~~~a~i~~aGP~-----------VIe~~~G~e~~~~~d~~l~~~~lGG~~~~~sG~~D~~v~d  217 (274)
T TIGR03133       149 CFGGMGIAAGLCSYLIMTEEGRLGLSGPE-----------VIEQEAGVEEFDSRDRALVWRTTGGKHRFLSGDADVLVED  217 (274)
T ss_pred             cchHHHHHHhcCCEEEEeCCcEEeccCHH-----------HHHHhcCCCccCHHHhcccccccchHhHhhcccceEEeCC
Confidence            89999999999999999998877663211           12222231  112222222233555667889999999986


Q ss_pred             c--hHHHHHHHHH
Q psy9281         113 E--KLLEETIKLA  123 (152)
Q Consensus       113 ~--~l~~~~~~~a  123 (152)
                      |  .+.+.+.++.
T Consensus       218 d~~a~~~~~~~~l  230 (274)
T TIGR03133       218 DVDAFRAAVIAAL  230 (274)
T ss_pred             HHHHHHHHHHHHH
Confidence            4  4444444433

Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.

>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification

Probab=95.96  E-value=0.0088  Score=42.87  Aligned_cols=34  Identities=29%  Similarity=0.382  Sum_probs=27.5

Q ss_pred             HHHcCCCCCHHHHHHcCCccccCCcchHHHHHHH
Q psy9281          88 ICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIK  121 (152)
Q Consensus        88 lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~  121 (152)
                      -+..|..+++++|++.||||++-..+++.+.+.+
T Consensus       116 ~~~~~~~~~~~~A~~~GLiD~i~~~~~~~~~l~~  149 (154)
T PF01343_consen  116 EIADGGVFTAQQALELGLIDEIGTFDEAIARLAK  149 (154)
T ss_dssp             CHHCCHEEEHHHHHHTTSSSEETSHHHHHHHHHH
T ss_pred             HHHhhccccHHHHHHcCchhhcCCHHHHHHHHHH
Confidence            3578899999999999999999876666655444

; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.

>PRK05654 acetyl-CoA carboxylase subunit beta; Validated

Probab=95.96  E-value=0.036  Score=44.05  Aligned_cols=81  Identities=21%  Similarity=0.177  Sum_probs=54.5

Q ss_pred             hhchHHH-HHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGC-ELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~-~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+||+. .+++.+|++++.+++.+++...+           .+...++..    + . -+--+++-+.+.|+||.++++
T Consensus       204 pt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~e~----l-p-e~~~~ae~~~~~G~vD~Vv~~  266 (292)
T PRK05654        204 PTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVREK----L-P-EGFQRAEFLLEHGAIDMIVHR  266 (292)
T ss_pred             CCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhhhh----h-h-hhhcCHHHHHhCCCCcEEECH
Confidence            8888864 45777999999888877764332           112222211    1 1 112356777899999999999


Q ss_pred             chHHHHHHHHHHHHhcCCH
Q psy9281         113 EKLLEETIKLAERIGEHSP  131 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~  131 (152)
                      .++.+...++.+.+...++
T Consensus       267 ~e~r~~l~~~L~~~~~~~~  285 (292)
T PRK05654        267 RELRDTLASLLALHTKQPA  285 (292)
T ss_pred             HHHHHHHHHHHHHHhcCCC
Confidence            9999888888887665543

>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily

Probab=95.85  E-value=0.031  Score=43.92  Aligned_cols=38  Identities=29%  Similarity=0.414  Sum_probs=35.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAG   71 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~   71 (152)
                      .|+-+|..++++||-+++.+++.++-.+.++|-.|..+
T Consensus       128 ~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~s  165 (285)
T PF01972_consen  128 YAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAAS  165 (285)
T ss_pred             ccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHH
Confidence            99999999999999999999999999999999888643

The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane

>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit

Probab=95.59  E-value=0.033  Score=44.10  Aligned_cols=78  Identities=18%  Similarity=0.168  Sum_probs=52.7

Q ss_pred             hhchHHH-HHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGC-ELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~-~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+||+. .+++.+|++++.+++.+++...++           +.+.+|.     -+- -+--+++-+.+.|+||.++++
T Consensus       203 pt~GG~aas~a~~~D~iia~p~A~ig~aGprV-----------ie~ti~e-----~lp-e~~q~ae~~~~~G~vD~iv~~  265 (285)
T TIGR00515       203 PTTGGVSASFAMLGDLNIAEPKALIGFAGPRV-----------IEQTVRE-----KLP-EGFQTSEFLLEHGAIDMIVHR  265 (285)
T ss_pred             CcchHHHHHHHhCCCEEEEECCeEEEcCCHHH-----------HHHHhcC-----ccc-hhcCCHHHHHhCCCCcEEECc
Confidence            8888864 456799999999998877744431           2222331     111 112356667889999999999


Q ss_pred             chHHHHHHHHHHHHhc
Q psy9281         113 EKLLEETIKLAERIGE  128 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~  128 (152)
                      .++.+...++...+..
T Consensus       266 ~~~r~~l~~~L~~~~~  281 (285)
T TIGR00515       266 PEMKKTLASLLAKLQN  281 (285)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9998887777765543

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>PRK11778 putative inner membrane peptidase; Provisional

Probab=95.49  E-value=0.045  Score=44.20  Aligned_cols=34  Identities=29%  Similarity=0.476  Sum_probs=27.4

Q ss_pred             HHHHcCCCCCHHHHHHcCCccccCCcchHHHHHH
Q psy9281          87 EICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETI  120 (152)
Q Consensus        87 ~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~  120 (152)
                      +-+.+|+.+++++|++.||||++...+++.....
T Consensus       261 ~~va~G~v~~g~~Al~~GLVD~Ig~~dd~i~~~~  294 (330)
T PRK11778        261 DKVATGEHWYGQQALELGLVDEIQTSDDYLLELM  294 (330)
T ss_pred             HHHHhCCCcCHHHHHHCCCCCcCCCHHHHHHHHH
Confidence            4467899999999999999999998766654433

>PRK10949 protease 4; Provisional

Probab=95.37  E-value=0.048  Score=47.61  Aligned_cols=35  Identities=23%  Similarity=0.314  Sum_probs=27.0

Q ss_pred             HHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHH
Q psy9281          88 ICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKL  122 (152)
Q Consensus        88 lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~  122 (152)
                      -+..|+.+++++|++.||||++-..++..+.+.++
T Consensus       505 ~ia~Grv~tg~~A~~~GLVD~lG~~~~ai~~a~~~  539 (618)
T PRK10949        505 KIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAEL  539 (618)
T ss_pred             HHhcCCcccHHHHHHcCCCccCCCHHHHHHHHHHH
Confidence            35789999999999999999998655554444443

>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed

Probab=95.02  E-value=0.084  Score=42.00  Aligned_cols=75  Identities=20%  Similarity=0.151  Sum_probs=48.3

Q ss_pred             hhchHHHHH-HHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCEL-AMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~l-al~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|.||+... ++.+|++|+.+++.+++...++           ....+|.     -+- -.--+++-.++.|+||.++++
T Consensus       217 Pt~GG~aas~a~l~Diiiae~~A~IgfAGPrV-----------Ie~t~ge-----~lp-e~fq~ae~l~~~G~vD~iV~r  279 (296)
T CHL00174        217 PTTGGVTASFGMLGDIIIAEPNAYIAFAGKRV-----------IEQTLNK-----TVP-EGSQAAEYLFDKGLFDLIVPR  279 (296)
T ss_pred             CCchHHHHHHHHcccEEEEeCCeEEEeeCHHH-----------HHHhcCC-----cCC-cccccHHHHHhCcCceEEEcH
Confidence            888888655 6679999998888766643221           1111221     000 011346778899999999999


Q ss_pred             chHHHHHHHHHHH
Q psy9281         113 EKLLEETIKLAER  125 (152)
Q Consensus       113 ~~l~~~~~~~a~~  125 (152)
                      .++.+....+..-
T Consensus       280 ~~lr~~l~~ll~~  292 (296)
T CHL00174        280 NLLKGVLSELFQL  292 (296)
T ss_pred             HHHHHHHHHHHHh
Confidence            9888777666544

>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]

Probab=94.88  E-value=0.066  Score=42.36  Aligned_cols=64  Identities=23%  Similarity=0.330  Sum_probs=45.8

Q ss_pred             HHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          39 GCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        39 G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      |+-=...+|.+++-+++.++.      +.|.++++..|...   .++.+.. ..-+++++++++.|+||.++|.
T Consensus       203 GALAi~vad~V~mle~s~ySV------isPEG~AsILWkD~---~ka~eAA-e~mkita~dLk~lgiID~II~E  266 (317)
T COG0825         203 GALAIGVADRVLMLENSTYSV------ISPEGCASILWKDA---SKAKEAA-EAMKITAHDLKELGIIDGIIPE  266 (317)
T ss_pred             hhHHhhHHHHHHHHHhceeee------cChhhhhhhhhcCh---hhhHHHH-HHcCCCHHHHHhCCCcceeccC
Confidence            333345679999999999886      56777777655543   3344432 2347999999999999999973

>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.81  E-value=0.13  Score=38.66  Aligned_cols=80  Identities=20%  Similarity=0.183  Sum_probs=43.7

Q ss_pred             hhchHHHHHHHHcCee--EecCCeEEecccccccccCCccHHH----------------HHHHHhCHHHH--HHHHHcCC
Q psy9281          34 IYLGGGCELAMMCDII--YAGEKAKFGQPEIIIGTMPGAGGTQ----------------RLTRAAGKSNA--MEICLTGN   93 (152)
Q Consensus        34 ~a~G~G~~lal~cD~r--ia~~~a~f~~pe~~~G~~p~~~~~~----------------~l~~~~g~~~a--~~lll~g~   93 (152)
                      .|...|..|+++.|..  ++.+++++-.-... |.+-+...=.                .+.+.-|....  ...+-...
T Consensus        95 ~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a~~TGq~~e~i~~d~drd~  173 (200)
T COG0740          95 QAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYAEHTGQTLEKIEKDTDRDT  173 (200)
T ss_pred             HHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhhcccc
Confidence            4444556777777774  77777776554444 3222111100                01112232222  22223344


Q ss_pred             CCCHHHHHHcCCccccCCcch
Q psy9281          94 QFTAQEAKEMGVVSKIFPPEK  114 (152)
Q Consensus        94 ~~~a~ea~~~Glv~~v~~~~~  114 (152)
                      -++|+||+++||||+|.+..+
T Consensus       174 ~msa~eA~~yGLiD~V~~~~~  194 (200)
T COG0740         174 WMSAEEAKEYGLIDKVIESRE  194 (200)
T ss_pred             cCCHHHHHHcCCcceeccccc
Confidence            589999999999999987543

>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.70  E-value=0.086  Score=42.31  Aligned_cols=78  Identities=27%  Similarity=0.380  Sum_probs=53.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhC--------------------------------
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAG--------------------------------   81 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g--------------------------------   81 (152)
                      +|.-||..+++++|.+||++++..+=-.+..+. |.   ...+.++.|                                
T Consensus       138 ~AASGGY~IA~aAd~I~a~p~si~GSIGVi~~~-~~---~~~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~  213 (317)
T COG0616         138 YAASGGYYIALAADKIVADPSSITGSIGVISGA-PN---FEELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKE  213 (317)
T ss_pred             eecchhhhhhccCCEEEecCCceeeeceeEEec-CC---HHHHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHH
Confidence            899999999999999999998875544443331 11   111222221                                


Q ss_pred             ------------------HHHHHHHHHcCCCCCHHHHHHcCCccccCCcchH
Q psy9281          82 ------------------KSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL  115 (152)
Q Consensus        82 ------------------~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l  115 (152)
                                        ......-+.+|+-+++++|.+.||||++-..++.
T Consensus       214 ~~e~y~~F~~~V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~~~a  265 (317)
T COG0616         214 IDETYDEFVDKVAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGLDDA  265 (317)
T ss_pred             HHHHHHHHHHHHHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCHHHH
Confidence                              1122356788999999999999999999864443

>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit

Probab=94.14  E-value=0.12  Score=39.95  Aligned_cols=72  Identities=13%  Similarity=0.102  Sum_probs=43.0

Q ss_pred             hhchHHHH-HHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcC--CCCCHHHHHHcCCccccC
Q psy9281          34 IYLGGGCE-LAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTG--NQFTAQEAKEMGVVSKIF  110 (152)
Q Consensus        34 ~a~G~G~~-lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g--~~~~a~ea~~~Glv~~v~  110 (152)
                      .++|||+. +.+.+|.++|.       |...++..++.+++..+.+..  ..+.++.-.-  ...++..+.+.|+|++++
T Consensus       117 ~a~ggg~lamg~~ad~v~Al-------p~A~i~vm~~e~aa~I~~~~~--~~~~e~a~~~~~~a~~~~~~~~~G~vd~vi  187 (238)
T TIGR03134       117 KAISGAFLAHGLQADRIIAL-------PGAMVHVMDLESMARVTKRSV--EELEALAKSSPVFAPGIENFVKLGGVHALL  187 (238)
T ss_pred             CccHHHHHHHccCcCeEEEc-------CCcEEEecCHHHHHHHHccCH--hHHHHHHHhhhhhccCHHHHHhCCCccEEe
Confidence            66666643 33336777665       555666666655555444333  2334443332  236778899999999999


Q ss_pred             Ccch
Q psy9281         111 PPEK  114 (152)
Q Consensus       111 ~~~~  114 (152)
                      ++.+
T Consensus       188 ~~~~  191 (238)
T TIGR03134       188 DVAD  191 (238)
T ss_pred             CCCC
Confidence            8544

Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.

>PRK07189 malonate decarboxylase subunit beta; Reviewed

Probab=93.97  E-value=0.15  Score=40.71  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=23.0

Q ss_pred             hchHHHHHHHHcCeeEecCCeEEec
Q psy9281          35 YLGGGCELAMMCDIIYAGEKAKFGQ   59 (152)
Q Consensus        35 a~G~G~~lal~cD~ria~~~a~f~~   59 (152)
                      |+||+...+..||++|+++++++++
T Consensus       158 c~GG~a~~a~l~D~iIm~~~a~igl  182 (301)
T PRK07189        158 CFGGMGIAAALCSYLIVSEEGRLGL  182 (301)
T ss_pred             CcHHHHHHHhcCCEEEEECCcEEec
Confidence            9999999999999999999887766

>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]

Probab=93.91  E-value=0.18  Score=42.89  Aligned_cols=59  Identities=24%  Similarity=0.316  Sum_probs=43.4

Q ss_pred             hhchHHHHHHHHcCeeEecCC-eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|+|+|..++..||++|++++ +.+.+...+            +.+          ..+|+.++.++.       ...|.
T Consensus       141 ~~~Gg~A~~~~~~d~~i~~~~~a~i~l~GP~------------vv~----------~~~Ge~~~~~~lgG~~~h~~~sG~  198 (493)
T PF01039_consen  141 PCTGGGAYLAALSDFVIMVKGTARIFLAGPR------------VVE----------SATGEEVDSEELGGADVHAAKSGV  198 (493)
T ss_dssp             EEEGGGGHHHHHSSEEEEETTTCEEESSTHH------------HHH----------HHHSSCTSHHHHHBHHHHHHTSSS
T ss_pred             ccccchhhcccccCccccCccceEEEecccc------------ccc----------cccCccccchhhhhhhhhcccCCC
Confidence            999999999999999999987 776653211            111          244678887764       47899


Q ss_pred             ccccCCcch
Q psy9281         106 VSKIFPPEK  114 (152)
Q Consensus       106 v~~v~~~~~  114 (152)
                      ++.++++|+
T Consensus       199 ~d~v~~de~  207 (493)
T PF01039_consen  199 VDYVVDDEE  207 (493)
T ss_dssp             SSEEESSHH
T ss_pred             ceEEEechH
Confidence            999998653

The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....

>KOG1683|consensus

Probab=93.85  E-value=0.0084  Score=48.72  Aligned_cols=80  Identities=20%  Similarity=0.201  Sum_probs=62.0

Q ss_pred             HHHHHHcCeeEec--CCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc--chH
Q psy9281          40 CELAMMCDIIYAG--EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP--EKL  115 (152)
Q Consensus        40 ~~lal~cD~ria~--~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~--~~l  115 (152)
                      +.++-+|+||+..  ..-..+..+...++..++.-.-.+...+|.+.+-.-+-.+.-++..|+++.|+++++.|.  +++
T Consensus       166 vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~~g~~~L~d~~gfdv~eal~~gl~~~~~~r~~eel  245 (380)
T KOG1683|consen  166 VVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFRVGERALADGVGFDVAEALAVGLGDEIGPRIEEEL  245 (380)
T ss_pred             EEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCccccHHHHhhccCccHHHHHhhccchhccchhHHHH
Confidence            7889999999987  444557888888865544445557777888777788888999999999999999999984  444


Q ss_pred             HHHH
Q psy9281         116 LEET  119 (152)
Q Consensus       116 ~~~~  119 (152)
                      .+..
T Consensus       246 ~~~~  249 (380)
T KOG1683|consen  246 LEKG  249 (380)
T ss_pred             HHHH
Confidence            4433

>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]

Probab=92.14  E-value=0.41  Score=39.97  Aligned_cols=79  Identities=22%  Similarity=0.200  Sum_probs=58.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccc---cCCcc-HHHH------HHHHhC--HHHHHHHHHcCCCCCHHHHH
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGT---MPGAG-GTQR------LTRAAG--KSNAMEICLTGNQFTAQEAK  101 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~---~p~~~-~~~~------l~~~~g--~~~a~~lll~g~~~~a~ea~  101 (152)
                      .|.-+|..++++||+..|.+.+.++-...-.+-   ..... ....      +.+.-|  ...|.+++.....++++||.
T Consensus        98 ~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN~~~ae~~v~~~~~l~a~eA~  177 (436)
T COG1030          98 RAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRNPTWAERFVTENLSLTAEEAL  177 (436)
T ss_pred             chhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCChHHHHHHhhhccCCChhHHH
Confidence            688999999999999999999888876665433   11111 1111      222223  56889999999999999999


Q ss_pred             HcCCccccCCc
Q psy9281         102 EMGVVSKIFPP  112 (152)
Q Consensus       102 ~~Glv~~v~~~  112 (152)
                      +.|++|-+..+
T Consensus       178 ~~~vid~iA~~  188 (436)
T COG1030         178 RQGVIDLIARD  188 (436)
T ss_pred             hcCccccccCC
Confidence            99999998864

>KOG0840|consensus

Probab=91.86  E-value=0.27  Score=38.28  Aligned_cols=76  Identities=20%  Similarity=0.294  Sum_probs=42.4

Q ss_pred             hhchHHHHHHHHcCeeE-ecCCeEEecccccccccCCccHHH-----H---HHH--------------HhC--HHHHHHH
Q psy9281          34 IYLGGGCELAMMCDIIY-AGEKAKFGQPEIIIGTMPGAGGTQ-----R---LTR--------------AAG--KSNAMEI   88 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ri-a~~~a~f~~pe~~~G~~p~~~~~~-----~---l~~--------------~~g--~~~a~~l   88 (152)
                      .|+|-++.++..  +.- .+.+-++++|..++=+.-+.++..     .   ..+              ..|  .....+-
T Consensus       156 ic~G~Aas~aal--LLaaG~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~~d  233 (275)
T KOG0840|consen  156 ICVGLAASMAAL--LLAAGAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIEKD  233 (275)
T ss_pred             eehhhHHhHHHH--HHhcCCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhh
Confidence            777777655543  112 245667888888776633333211     0   111              111  1112222


Q ss_pred             HHcCCCCCHHHHHHcCCccccCC
Q psy9281          89 CLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        89 ll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                      +-.-+-++|+||.++||||.|++
T Consensus       234 ~dRd~fmsa~EA~eyGliD~v~~  256 (275)
T KOG0840|consen  234 MDRDRFMSAEEAKEYGLIDKVID  256 (275)
T ss_pred             hcccccCCHHHHHHhcchhhhhc
Confidence            23344589999999999999985

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=90.36  E-value=1.1  Score=38.32  Aligned_cols=86  Identities=19%  Similarity=0.229  Sum_probs=50.0

Q ss_pred             hhchHHHHHHHH-----cCeeEecCCeEEecccccccccCCccHHHHHH-HHhC----HHHHHHHH---HcCCCCCHHHH
Q psy9281          34 IYLGGGCELAMM-----CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLT-RAAG----KSNAMEIC---LTGNQFTAQEA  100 (152)
Q Consensus        34 ~a~G~G~~lal~-----cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~-~~~g----~~~a~~ll---l~g~~~~a~ea  100 (152)
                      .++|+|. ++++     +|++++.+++.++.       .++.+++..+- +.+.    +..++.-.   ..-+..++..+
T Consensus       398 ~~~Gga~-~am~~~~~~~d~~~a~p~a~~~v-------~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (512)
T TIGR01117       398 KAYGGAY-LAMCSKHLGADQVYAWPTAEIAV-------MGPAGAANIIFRKDIKEAKDPAATRKQKIAEYREEFANPYKA  469 (512)
T ss_pred             CCchHHH-HHhccccCCCCEEEEcCCCeEee-------cCHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHhhcCHHHH
Confidence            6777754 4444     88887777765544       33333222222 2111    11111111   11234578899


Q ss_pred             HHcCCccccCCcchHHHHHHHHHHHHh
Q psy9281         101 KEMGVVSKIFPPEKLLEETIKLAERIG  127 (152)
Q Consensus       101 ~~~Glv~~v~~~~~l~~~~~~~a~~l~  127 (152)
                      .+.|+||.|+++.++.+......+.+.
T Consensus       470 a~~g~vD~VI~P~~tR~~l~~~l~~~~  496 (512)
T TIGR01117       470 AARGYVDDVIEPKQTRPKIVNALAMLE  496 (512)
T ss_pred             HhcCCCCeeEChHHHHHHHHHHHHHHh
Confidence            999999999999988877766666544

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=89.96  E-value=0.68  Score=39.69  Aligned_cols=71  Identities=21%  Similarity=0.289  Sum_probs=45.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCe-EEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-----H--HcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKA-KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-----K--EMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a-~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-----~--~~Gl  105 (152)
                      +|.||+......||++|+++++ ++.+.           +.. +.+.          .+|+.++++|.     +  ..|.
T Consensus       164 ~~~GG~a~~~al~D~vim~~~~a~i~~a-----------GP~-vv~~----------~~Ge~v~~e~lGGa~~h~~~sGv  221 (512)
T TIGR01117       164 PCAGGAVYSPALTDFIYMVDNTSQMFIT-----------GPQ-VIKT----------VTGEEVTAEQLGGAMAHNSVSGV  221 (512)
T ss_pred             CCCcHHHHHHHhcCceEEeccceEEEec-----------ChH-HHHh----------hcCcccchhhcchHHHhccccce
Confidence            9999998888899999999864 44441           111 2222          33455555554     2  5899


Q ss_pred             ccccCCcc-hHHHHHHHHHHHH
Q psy9281         106 VSKIFPPE-KLLEETIKLAERI  126 (152)
Q Consensus       106 v~~v~~~~-~l~~~~~~~a~~l  126 (152)
                      ++.++++| +..+.++++..-+
T Consensus       222 ~d~~~~de~ea~~~~r~~ls~l  243 (512)
T TIGR01117       222 AHFIAEDDDDCIMLIRRLLSFL  243 (512)
T ss_pred             eEEecCChHHHHHHHHHHHHhC
Confidence            99998754 5555555555544

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=85.29  E-value=0.73  Score=34.63  Aligned_cols=30  Identities=23%  Similarity=0.327  Sum_probs=24.2

Q ss_pred             HHHHcCCCCCHHHHHHcCCccccCCcchHH
Q psy9281          87 EICLTGNQFTAQEAKEMGVVSKIFPPEKLL  116 (152)
Q Consensus        87 ~lll~g~~~~a~ea~~~Glv~~v~~~~~l~  116 (152)
                      +-+..|..++++||++.||||++...++..
T Consensus       178 ~~~~~~~~~~~~~A~~~GLvD~i~~~~~~~  207 (211)
T cd07019         178 DKIAQGHVWTGQDAKANGLVDSLGDFDDAV  207 (211)
T ss_pred             HHhcCCcEEeHHHHHHcCCcccCCCHHHHH
Confidence            335678899999999999999998755543

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>smart00250 PLEC Plectin repeat

Probab=84.22  E-value=0.93  Score=24.53  Aligned_cols=18  Identities=28%  Similarity=0.567  Sum_probs=16.9

Q ss_pred             cCCCCCHHHHHHcCCccc
Q psy9281          91 TGNQFTAQEAKEMGVVSK  108 (152)
Q Consensus        91 ~g~~~~a~ea~~~Glv~~  108 (152)
                      +|+++|-.||.+.|+++.
T Consensus        18 t~~~lsv~eA~~~glid~   35 (38)
T smart00250       18 TGQKLSVEEALRRGLIDP   35 (38)
T ss_pred             CCCCcCHHHHHHcCCCCc
Confidence            899999999999999985

>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]

Probab=83.83  E-value=1.7  Score=34.25  Aligned_cols=81  Identities=23%  Similarity=0.235  Sum_probs=55.3

Q ss_pred             hhchHH-HHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGG-CELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G-~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      ++.||= +.+++.-|+.|+-++|.+++...++           .-+     ..++-+..| --+++-.++.|+||.++++
T Consensus       205 PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV-----------IEQ-----Tire~LPeg-fQ~aEfLlehG~iD~iv~R  267 (294)
T COG0777         205 PTTGGVSASFAMLGDIIIAEPGALIGFAGPRV-----------IEQ-----TIREKLPEG-FQTAEFLLEHGMIDMIVHR  267 (294)
T ss_pred             CCccchhHhHHhccCeeecCcccccccCcchh-----------hhh-----hhcccCCcc-hhhHHHHHHcCCceeeecH
Confidence            666654 7889999999888777776654331           111     122223333 2457788999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCH
Q psy9281         113 EKLLEETIKLAERIGEHSP  131 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~  131 (152)
                      .++.+....+...+...++
T Consensus       268 ~elr~tla~ll~~~~~~~~  286 (294)
T COG0777         268 DELRTTLASLLAKLTPQPA  286 (294)
T ss_pred             HHHHHHHHHHHHHhCCCCC
Confidence            9998887777777665543

>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain

Probab=83.28  E-value=3.9  Score=35.63  Aligned_cols=71  Identities=20%  Similarity=0.253  Sum_probs=43.4

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-----H--HcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-----K--EMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-----~--~~Gl  105 (152)
                      +|.|||......||++|+++ ++.+.+.           +.. +.+.          .+|+.++++|.     +  ..|.
T Consensus       215 ~~~gGgAy~~a~~D~vim~~~~a~i~~a-----------GP~-vV~~----------~~Ge~v~~eeLGGa~~h~~~sGv  272 (569)
T PLN02820        215 SCTAGGAYVPAMADESVIVKGNGTIFLA-----------GPP-LVKA----------ATGEEVSAEDLGGADVHCKVSGV  272 (569)
T ss_pred             CCChHHHHHHHhCCceEEecCCcEEEec-----------CHH-HHHh----------hcCcccCHHHhCCHHHhcccccc
Confidence            79999999999999999886 4545441           111 2222          34555665554     2  4788


Q ss_pred             ccccCCcc-hHHHHHHHHHHHH
Q psy9281         106 VSKIFPPE-KLLEETIKLAERI  126 (152)
Q Consensus       106 v~~v~~~~-~l~~~~~~~a~~l  126 (152)
                      ++.++++| +..+.++++..-+
T Consensus       273 ~d~~~~de~~a~~~~R~lls~L  294 (569)
T PLN02820        273 SDHFAQDELHALAIGRNIVKNL  294 (569)
T ss_pred             cccccCchHHHHHHHHHHHHhc
Confidence            88888755 3334444444444

>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]

Probab=80.92  E-value=1  Score=38.70  Aligned_cols=71  Identities=21%  Similarity=0.346  Sum_probs=44.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCe-EEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKA-KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a-~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      .|.|||+.+...||++|++++. ++.+.        +   .. +.+.          .+|+.++++|+       ...|.
T Consensus       173 ~c~gGgaY~pal~D~~imv~~~~~mflt--------G---P~-~ik~----------vtGe~V~~e~LGGa~vh~~~sGv  230 (526)
T COG4799         173 PCAGGGAYSPALTDFVIMVRDQSYMFLT--------G---PP-VIKA----------VTGEEVSAEELGGAQVHARKSGV  230 (526)
T ss_pred             cCcccccccccccceEEEEcCCccEEee--------C---HH-HHHh----------hcCcEeehhhccchhhhcccccc
Confidence            9999999999999999999884 33221        1   11 2222          34555555432       23488


Q ss_pred             ccccCCcchHHHHHHHHHHHHhcC
Q psy9281         106 VSKIFPPEKLLEETIKLAERIGEH  129 (152)
Q Consensus       106 v~~v~~~~~l~~~~~~~a~~l~~~  129 (152)
                      ++.++++|+   .+.++++++.++
T Consensus       231 a~~~a~dd~---~Ai~~vr~~lsy  251 (526)
T COG4799         231 ADLLAEDDE---DAIELVRRLLSY  251 (526)
T ss_pred             eeeeecCHH---HHHHHHHHHHHh
Confidence            888886543   455556555543

>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes

Probab=80.18  E-value=0.6  Score=26.34  Aligned_cols=20  Identities=25%  Similarity=0.438  Sum_probs=16.7

Q ss_pred             HcCCCCCHHHHHHcCCcccc
Q psy9281          90 LTGNQFTAQEAKEMGVVSKI  109 (152)
Q Consensus        90 l~g~~~~a~ea~~~Glv~~v  109 (152)
                      -+|++++-+||.+.|+|+.-
T Consensus        17 ~tg~~lsv~~A~~~glId~~   36 (45)
T PF00681_consen   17 ETGERLSVEEAIQRGLIDSD   36 (45)
T ss_dssp             TTTEEEEHHHHHHTTSS-HH
T ss_pred             CCCeEEcHHHHHHCCCcCHH
Confidence            47899999999999999863

Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
1dub_A	261	2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph		1e-39
1mj3_A	260	Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata		1e-39
1ey3_A	258	Structure Of Enoyl-Coa Hydratase Complexed With The		1e-39
2hw5_A	286	The Crystal Structure Of Human Enoyl-Coenzyme A (Co		8e-39
3moy_A	263	Crystal Structure Of Probable Enoyl-Coa Hydratase F		8e-32
4fzw_A	258	Crystal Structure Of The Paaf-paag Hydratase-isomer		4e-30
3q0j_A	258	Crystal Structure Of The Mycobacterium Tuberculosis		3e-28
3pzk_A	257	Crystal Structure Of The Mycobacterium Tuberculosis		3e-28
3h81_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		4e-28
2pbp_A	258	Crystal Structure Of Enoyl-Coa Hydrates Subunit I (		2e-27
3kqf_A	265	1.8 Angstrom Resolution Crystal Structure Of Enoyl-		3e-20
2ppy_A	265	Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) F		1e-18
3pea_A	261	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		1e-17
2iex_A	272	Crystal Structure Of Dihydroxynapthoic Acid Synthet		2e-17
3rsi_A	265	The Structure Of A Putative Enoyl-Coa HydrataseISOM		4e-17
3trr_A	256	Crystal Structure Of A Probable Enoyl-Coa Hydratase		5e-16
4eml_A	275	Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoy		8e-16
3r0o_A	273	Crystal Structure Of Carnitinyl-Coa Hydratase From		2e-15
2uzf_A	273	Crystal Structure Of Staphylococcus Aureus 1,4-Dihy		3e-15
3t88_A	289	Crystal Structure Of Escherichia Coli Menb In Compl		4e-14
4els_A	285	Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Co		4e-14
1uiy_A	253	Crystal Structure Of Enoyl-Coa Hydratase From Therm		2e-13
3swx_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-13
4di1_A	277	Crystal Structure Of Enoyl-Coa Hydratase Echa17 Fro		6e-13
3h0u_A	289	Crystal Structure Of A Putative Enoyl-Coa Hydratase		8e-13
2vx2_A	287	Crystal Structure Of Human Enoyl Coenzyme A Hydrata		4e-12
3h02_A	288	2.15 Angstrom Resolution Crystal Structure Of Napht		1e-11
4f47_A	278	The Structure Of Enoyl-Coa Hydratase Echa19 From My		1e-11
3lao_A	258	Crystal Structure Of Enoyl-Coa Hydratase From Pseud		3e-11
4fzw_C	274	Crystal Structure Of The Paaf-paag Hydratase-isomer		3e-11
3t3w_A	279	Crystal Structure Of Probable Enoyl-Coa Hydratase F		4e-11
2gtr_A	261	Human Chromodomain Y-Like Protein Length = 261		5e-11
2wtb_A	725	Arabidopsis Thaliana Multifuctional Protein, Mfp2 L		1e-10
3pe8_A	256	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		1e-10
1wdk_A	715	Fatty Acid Beta-Oxidation Multienzyme Complex From		2e-10
3r9s_A	267	Structure Of A Carnitinyl-Coa Dehydratase From Myco		2e-10
3r9t_A	267	Structure Of Echa1_1 From Mycobacterium Paratubercu		2e-10
2vss_E	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		3e-10
1dci_A	275	Dienoyl-Coa Isomerase Length = 275		3e-10
1ef8_A	261	Crystal Structure Of Methylmalonyl Coa Decarboxylas		3e-10
2j5i_B	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		3e-10
2vss_F	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		3e-10
2j5i_I	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		3e-10
2j5i_A	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		4e-10
2vsu_E	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		4e-10
2vsu_A	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		4e-10
2vsu_F	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		4e-10
2vsu_C	275	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		4e-10
3ome_A	282	Crystal Structure Of A Probable Enoyl-Coa Hydratase		4e-10
3gkb_A	287	Crystal Structure Of A Putative Enoyl-coa Hydratase		4e-10
3qyr_A	253	Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M		5e-10
3p85_A	270	Crystal Structure Enoyl-Coa Hydratase From Mycobact		5e-10
2fbm_A	291	Acetyltransferase Domain Of Cdy1 Length = 291		6e-10
1rjm_A	339	Crystal Structure Of Menb (rv0548c) From Mycobacter		1e-09
1q51_A	314	Crystal Structure Of Mycobacterium Tuberculosis Men		1e-09
3t8a_A	334	Crystal Structure Of Mycobacterium Tuberculosis Men		1e-09
2vre_A	296	Crystal Structure Of Human Peroxisomal Delta3,5, De		1e-09
2x58_A	727	The Crystal Structure Of Mfe1 Liganded With Coa Len		1e-09
3zw8_A	742	Crystal Structure Of Rat Peroxisomal Multifunctiona		1e-09
3hrx_A	254	Crystal Structure Of Phenylacetic Acid Degradation		2e-09
3sll_A	290	Crystal Structure Of A Probable Enoyl-Coa Hydratase		3e-09
2fw2_A	260	Catalytic Domain Of Cdy Length = 260		5e-09
3zwb_A	742	Crystal Structure Of Rat Peroxisomal Multifunctiona		6e-09
3tlf_A	274	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		7e-09
1hzd_A	272	Crystal Structure Of Human Auh Protein, An Rna-Bind		2e-08
3qxz_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-08
3myb_A	286	Crystal Structure Of Enoyl-Coa Hydratase Mycobacter		5e-08
3m6m_A	305	Crystal Structure Of Rpff Complexed With Rec Domain		8e-08
1nzy_A	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		3e-07
1jxz_A	269	Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe		4e-07
1nzy_B	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		4e-07
2ej5_A	257	Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr		4e-07
3rrv_A	276	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		8e-07
3hin_A	275	Crystal Structure Of Putative Enoyl-Coa Hydratase F		1e-06
3qka_A	261	Crystal Structure Of Enoyl-Coa Hydratase Echa5 From		1e-06
3qxi_A	265	Crystal Structure Of Enoyl-Coa Hydratase Echa1 From		1e-06
3njb_A	333	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		1e-06
3i47_A	268	Crystal Structure Of Putative Enoyl Coa HydrataseIS		2e-06
3lke_A	263	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		3e-06
1o8u_A	257	The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase		3e-06
1szo_A	257	Crystal Structure Analysis Of The 6-Oxo Camphor Hyd		3e-06
3r9q_A	262	Structure Of A Probable Enoyl-Coa HydrataseISOMERAS		5e-06
2j5g_D	263	The Native Structure Of A Beta-Diketone Hydrolase F		8e-06
2j5g_A	263	The Native Structure Of A Beta-Diketone Hydrolase F		9e-06
3qmj_A	256	Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr		2e-05
2pg8_A	417	Crystal Structure Of R254k Mutanat Of Dpgc With Bou		2e-05
3qre_A	298	Crystal Structure Of An Enoyl-Coa Hydratase Echa12_		3e-05
3p5m_A	255	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		3e-05
2np9_A	440	Crystal Structure Of A Dioxygenase In The Crotonase		3e-05
3l3s_A	263	Crystal Structure Of An Enoyl-Coa HydrotaseISOMERAS		6e-05
4hdt_A	353	Crystal Structure Of A Carnitinyl-Coa Dehydratase F		6e-05
2w3p_A	556	Boxc Crystal Structure Length = 556		1e-04
3bpt_A	363	Crystal Structure Of Human Beta-Hydroxyisobutyryl-C		2e-04
2f6q_A	280	The Crystal Structure Of Human Peroxisomal Delta3,		3e-04
3he2_A	264	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		5e-04
3oc7_A	267	Crystal Structure Of An Enoyl-Coa Hydratase From My		7e-04

>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261

Iteration: 1
 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 92/107 (85%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 110 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 169
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct: 170 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 216

>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260

Iteration: 1
 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 92/107 (85%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 109 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 168
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct: 169 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 215

>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258

Iteration: 1
 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 92/107 (85%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 107 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 166
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct: 167 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 213

>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286

Iteration: 1
 Score =  155 bits (392), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 101/147 (68%), Gaps = 21/147 (14%)
Query: 17  DLYRSKNLKFIQC-----LKIWIYL----------------GGGCELAMMCDIIYAGEKA 55
           D+   +NL F  C     LK W +L                GGGCELAMMCDIIYAGEKA
Sbjct: 95  DIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKA 154
Query: 56  KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL 115
           +F QPEI+IGT+PGAGGTQRLTRA GKS AME+ LTG++ +AQ+AK+ G+VSKI P E L
Sbjct: 155 QFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETL 214
Query: 116 LEETIKLAERIGEHSPLIVTQVKEAVN 142
           +EE I+ AE+I  +S ++V   KE+VN
Sbjct: 215 VEEAIQCAEKIASNSKIVVAMAKESVN 241

>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263

Iteration: 1
 Score =  132 bits (332), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 80/107 (74%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CD++ A + A+FGQPEI +G +PG GGTQRLTRA GK+ AM++CLTG   
Sbjct: 112 LGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSL 171
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA+EA+ +G+VS+I P   LL+E + +A+RI   S      VK+A+N
Sbjct: 172 TAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAIN 218

>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258

Iteration: 1
 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 55/106 (51%), Positives = 78/106 (73%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG GCELA++CD++ AGE A+FG PEI +G MPGAGGTQRL R+ GKS A ++ L+G   
Sbjct: 107 LGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESI 166
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TAQ+A++ G+VS +FP +  LE  ++LA ++  HSPL +   K+A+
Sbjct: 167 TAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQAL 212

>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258

Iteration: 1
 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG   
Sbjct: 107 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 166
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++ P + LL E    A  I + S       KEAVN
Sbjct: 167 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 213

>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257

Iteration: 1
 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG   
Sbjct: 106 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 165
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++ P + LL E    A  I + S       KEAVN
Sbjct: 166 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 212

>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278

Iteration: 1
 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 72/107 (67%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG   
Sbjct: 127 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 186
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++ P + LL E    A  I + S       KEAVN
Sbjct: 187 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 233

>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258

Iteration: 1
 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 3   HFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEI 62
             E L    D+++  + ++  +  +  L     LGGG ELA+ CD+I A   A+FG PE+
Sbjct: 78  RLEWLNQFADWDRLSIVKTPMIAAVNGLA----LGGGFELALSCDLIVASSAAEFGFPEV 133
Query: 63  IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKL 122
            +G MPGAGGTQRLT+  G   A+E   TG + +A+EA+++G+V+++  PE L+EET++L
Sbjct: 134 NLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRL 193
Query: 123 AERIGEHSPLIVTQVKEAVN 142
           A R+ E  PL +  +KEAV 
Sbjct: 194 AGRLAEQPPLALRLIKEAVQ 213

>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 66/109 (60%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I LGGG EL++ CD   A E A  G  E  +  +PGAGGTQRL R  G   A E+  TG 
Sbjct: 112 IALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGR 171
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           + +AQEAKE G+V  + P   L E+ I++AE+I  + P+ V   KEA++
Sbjct: 172 RISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAIS 220

>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From Geobacillus Kaustophilus Hta426 Length = 265

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 3   HFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKA-KFGQPE 61
            F+  F L   E  D        +I CL+    +GGG E A+ CD+ + G++A K G PE
Sbjct: 81  RFKTQFCLFCNETLDKIARSPQVYIACLEGHT-VGGGLEXALACDLRFXGDEAGKIGLPE 139
Query: 62  IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIK 121
           + +G + G GGTQRL R  G S A++  +TG   T QEA E+G+V+++FP  +  E T +
Sbjct: 140 VSLGVLAGTGGTQRLARLIGYSRALDXNITGETITPQEALEIGLVNRVFPQAETRERTRE 199
Query: 122 LAERIGEHSPLIVTQVKEAV 141
            A ++   +   V+ +K A+
Sbjct: 200 YARKLANSATYAVSNIKLAI 219

>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 60/104 (57%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E A  C   +A E AK G PE+ +G +PG  GTQRL R  GK+ A E  LT    
Sbjct: 110 LGGGLEFAXSCHXRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEXXLTSTPI 169
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
           T  EA + G+V+ +F  E  L++T+K+A++I   SP     V E
Sbjct: 170 TGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLE 213

>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L ++CD+  A + A FGQ    +G+  G  G   L R  G   A EI     Q+
Sbjct: 118 IGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQY 177
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
           TAQEA EMG+V+K+ P E+L EET+K A+ I E SP  +  +K A N  D++GL
Sbjct: 178 TAQEALEMGLVNKVVPLEQLEEETVKWAQEILEKSPTAIRFLKAAFNA-DSDGL 230

>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 59/106 (55%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCE+    DI  + E A FG PE+  G +PGAG   RL R    + AME+ LTG   
Sbjct: 114 LGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPL 173
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TA EA   G+V  + P    L++   LA+RI  + PL V   KEA+
Sbjct: 174 TAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVRNAKEAI 219

>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 60/103 (58%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           L GG EL + CD++ AG  AKFG PE+  G + GAGG  RL        AME+ LTG  F
Sbjct: 105 LAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESF 164
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
           TA++A + G ++++    + L+  ++LA +I  + PL V   K
Sbjct: 165 TAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATK 207

>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In Complex With Bicarbonate Length = 275

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 63/109 (57%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L ++CD+  A + A FGQ    +G+  G  G+  L R  G+  A EI     Q+
Sbjct: 121 IGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQY 180
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
           +AQEA+ MG+V+ + P ++L EE I+ A+ I   SPL +  +K A N D
Sbjct: 181 SAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNAD 229

>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+  D++ A E A FG PE+  G + GAGG  R+     +  A+E+ LTG   
Sbjct: 119 LGGGSELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKVALELVLTGEPM 178
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE-AVNIDD 145
           TA +A   G+++++ P   ++E  + LAERI  ++PL V   K  A   DD
Sbjct: 179 TASDALRWGLINEVVPDGTVVEAALALAERITCNAPLSVQASKRVAYGADD 229

>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L ++CD+  A + A FGQ    +G+     G+  L R  G   A EI     Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
            AQEA +MG+V+ + P EK+ +ET++  + I +HSP  +  +K A+N  DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNA-DTDGL 231

>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 289

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L MMCD+  A + A FGQ    +G+  G  G   + R  G+  A EI     Q+
Sbjct: 135 IGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQY 194
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
            A++A +MG+V+ + P   L +ET++    + ++SP+ +  +K A+N D
Sbjct: 195 DAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNAD 243

>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme A Synthases (Menb) In Complex With Bicarbonate Length = 285

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L MMCD+  A + A FGQ    +G+  G  G   + R  G+  A EI     Q+
Sbjct: 131 IGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQY 190
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
            A++A +MG+V+ + P   L +ET++    + ++SP+ +  +K A+N D
Sbjct: 191 DAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNAD 239

>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG  LA+ CD++   E+A+ G  E+ IG +  A  +  L RA G+  A ++ LTG   
Sbjct: 106 VAGGAGLALACDLVVXDEEARLGYTEVKIGFV-AALVSVILVRAVGEKAAKDLLLTGRLV 164
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
            A+EAK +G+V++I PP K LEE   LAE + +++P  +   KE
Sbjct: 165 EAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKE 208

>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 52/96 (54%)
Query: 39  GCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ 98
           G ELA+  DI+ A E A F Q E+  G  P  G T R  R AG  NAM   LT + F A 
Sbjct: 117 GIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAV 176
Query: 99  EAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
           EA  +G+V +I P  + ++  I +A+ I   +PL V
Sbjct: 177 EAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGV 212

>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From Mycobacterium Marinum Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 56/107 (52%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG G  LA+  D   +G+  KFG  EI+ G +PG GG  RLTR  G S A E+  +G  F
Sbjct: 127 LGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFF 186
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EA  +G++  +  P+ + +  +  A R  E  P  +   K  +N
Sbjct: 187 DAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVIN 233

>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From Streptomyces Avermitilis Length = 289

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 37  GGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           G G E  + CD+ +A  E A  GQPE+ IG  PGAG  Q LTR  G+  A+E  LT + F
Sbjct: 116 GAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDF 175
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A  A+  G V++  P  +L E    +A R+       +   K A+N
Sbjct: 176 DADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALIAAKSAIN 222

>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase Domain-Containing Protein 3 (Echdc3) Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIG---TMPGAGGTQRLTRAAGKSNAMEICLTGN 93
             GC+L   CDI  A +K+ F  P + +G   + PG      L RA  +  A+E+  TG 
Sbjct: 139 AAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA----LARAVPRKVALEMLFTGE 194
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVT 135
             +AQEA   G++SK+ P  +L EET+++A +I   S  +V+
Sbjct: 195 PISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVS 236

>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium. Length = 288

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L   CD+  A E A FGQ    +G+  G  G     R  G+  A EI     Q+
Sbjct: 134 IGGGHVLHXXCDLTIAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAREIWFLCRQY 193
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
            AQ+A + G+V+ + P   L +ET++      ++SP  +  +K A+N D
Sbjct: 194 DAQQALDXGLVNTVVPLADLEKETVRWCREXLQNSPXALRCLKAALNAD 242

>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG E+    DI  A E AKFG  E      P  G   RL R    + A ++ LTG   
Sbjct: 127 IAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHI 186
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
           TA EAKEMG+V  + P  + L + +++AE I  + PL V  +     I +TEG++
Sbjct: 187 TAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQAILR--TIRETEGMH 239

>pdb|3LAO|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas Aeruginosa Pa01 Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 20  RSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRA 79
           RSK L        W     G EL +  DI  A    +F   E++ G  P  G T R  RA
Sbjct: 104 RSKPLVVAVQGTCWT---AGIELXLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRA 160
Query: 80  AGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
           AG ++A    LTG++F A EA    +++++  P + L   ++ AERI   +PL V
Sbjct: 161 AGWTDAXRYILTGDEFDADEALRXRLLTEVVEPGEELARALEYAERIARAAPLAV 215

>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 47  DIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVV 106
           DI+ A   AKF      +G +P  GGT  L R AG++ AM + L GNQ +A++A E G++
Sbjct: 134 DIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMI 193
Query: 107 SKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
            ++   E L +   +LA  +       +  +K+A+N  +T  L+
Sbjct: 194 WQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLD 237

>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEII--IGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           + GG  L   CD+I A E A F  P ++  IG +   G T  L    G   A EI  TG 
Sbjct: 129 ISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGVEYHGHTWEL----GPRKAKEILFTGR 184
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             TA+E  + G+V+++ P ++L  ET  LA  I +  P  + Q K AVN
Sbjct: 185 AMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVN 233

>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein Length = 261

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +  +CD+++A EKA F  P    G  P    T    +  G ++A E+ L+G + 
Sbjct: 113 IGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKL 172
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID---DTEGLNHR 152
           TAQEA   G+VS++F P    +E +   + +   +P+++ + K  V  +   + E  N R
Sbjct: 173 TAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANER 232

>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2 Length = 725

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 42  LAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAK 101
           LAM C    +   A+ G PE+ +G +PG GGTQRL R  G + A+E+ LT     A+E  
Sbjct: 120 LAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGH 179
Query: 102 EMGVVSKIFPPEKLLEETIKLA-ERIGEHSPLIVTQVK 138
            +G++  + PP +L+    + A + +G   P + +  K
Sbjct: 180 SLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSK 217

>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG ELA+ CDI+ A E AKF      +G MP  G + RL +  G   A  + LTG+  +A
Sbjct: 106 GGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSA 165
Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           Q+A   G+V+++   + LL    ++A  I
Sbjct: 166 QDALRAGLVTEVVAHDDLLTAARRVAASI 194

>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 715

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I LGGG E+ +  D     + AK G PE+ +G  PG GGT RL R  G  NA+E   +G 
Sbjct: 113 IALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGK 172
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAER 125
           +  A++A ++  V  +   +KL    + L +R
Sbjct: 173 ENRAEDALKVSAVDAVVTADKLGAAALDLIKR 204

>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+  D++ A E+A+FG PE+  G +  AGG  R+     +  AM + LTG   
Sbjct: 113 LGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPL 172
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
           +A  A++ G+++++     +L+  + LA  I  ++PL V   K
Sbjct: 173 SAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASK 215

>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+  D++ A E+A+FG PE+  G +  AGG  R+     +  AM + LTG   
Sbjct: 113 LGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPL 172
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
           +A  A++ G+++++     +L+  + LA  I  ++PL V   K
Sbjct: 173 SAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASK 215

>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 33  WIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTG 92
           W + GGG    + CD+    ++A FG  EI  G  PG   ++ +    G   ++   +TG
Sbjct: 116 WCF-GGGFSPLVACDLAICADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTG 174
Query: 93  NQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
             F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++   K
Sbjct: 175 KTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAK 220

>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAG-KSNAMEICLTGNQ 94
           +GGG +L   CDI Y  + A F   E+ +G     G  QRL +  G +S   E+  T  +
Sbjct: 119 IGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARK 178
Query: 95  FTAQEAKEMGVVSKIFPPEK-LLEETIKLAERIGEHSPLIV 134
             A EA + G+VS++FP +  +L     LA  I   SP+ V
Sbjct: 179 MMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAV 219

>pdb|1EF8|A Chain A, Crystal Structure Of Methylmalonyl Coa Decarboxylase Length = 261

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 31  KIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICL 90
            +W   GG  E+ M  D+I A   + F    + +G      G   LTR AG     E+  
Sbjct: 106 SVW---GGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIF 162
Query: 91  TGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI 143
           T +  TAQ A  +G+++ +   E+L + T+++A  I E +PL +  +KE + +
Sbjct: 163 TASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRV 215

>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 33  WIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTG 92
           W + GGG    + CD+    ++A FG  EI  G  PG   ++ +    G   ++   +TG
Sbjct: 116 WCF-GGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTG 174
Query: 93  NQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
             F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++   K
Sbjct: 175 KTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAK 220

>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 33  WIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTG 92
           W + GGG    + CD+    ++A FG  EI  G  PG   ++ +    G   ++   +TG
Sbjct: 116 WCF-GGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTG 174
Query: 93  NQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
             F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++   K
Sbjct: 175 KTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAK 220

>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 33  WIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTG 92
           W + GGG    + CD+    ++A FG  EI  G  PG   ++ +    G   ++   +TG
Sbjct: 116 WCF-GGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTG 174
Query: 93  NQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
             F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++   K
Sbjct: 175 KTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAK 220

>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 15  QKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQ 74
           Q  L R      I  +  W + GGG    + CD+    ++A FG  EI  G  PG   ++
Sbjct: 98  QWKLLRMYAKPTIAMVNGWCF-GGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSK 156
Query: 75  RLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
            +    G   ++   +TG  F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++
Sbjct: 157 AMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVL 216
Query: 135 TQVK 138
              K
Sbjct: 217 RAAK 220

>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 33  WIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTG 92
           W + GGG    + CD+    ++A FG  EI  G  PG   ++ +    G   ++   +TG
Sbjct: 116 WCF-GGGFAPLVACDLAICADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTG 174
Query: 93  NQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK 138
             F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++   K
Sbjct: 175 KTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAK 220

>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 15  QKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQ 74
           Q  L R      I  +  W + GGG    + CD+    ++A FG  EI  G  PG   ++
Sbjct: 98  QWKLLRMYAKPTIAMVNGWCF-GGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSK 156
Query: 75  RLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
            +    G   ++   +TG  F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++
Sbjct: 157 AMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVL 216
Query: 135 TQVK 138
              K
Sbjct: 217 RAAK 220

>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 15  QKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQ 74
           Q  L R      I  +  W + GGG    + CD+    ++A FG  EI  G  PG   ++
Sbjct: 98  QWKLLRMYAKPTIAMVNGWCF-GGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSK 156
Query: 75  RLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
            +    G   ++   +TG  F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++
Sbjct: 157 AMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVL 216
Query: 135 TQVK 138
              K
Sbjct: 217 RAAK 220

>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 15  QKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQ 74
           Q  L R      I  +  W + GGG    + CD+    ++A FG  EI  G  PG   ++
Sbjct: 98  QWKLLRMYAKPTIAMVNGWCF-GGGFAPLVACDLAICADEATFGLSEINWGIPPGNLVSK 156
Query: 75  RLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIV 134
            +    G   ++   +TG  F  Q+A EMG+V++  P  +L E TI+LA  + E +P+++
Sbjct: 157 AMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVL 216
Query: 135 TQVK 138
              K
Sbjct: 217 RAAK 220

>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRL--TRAAGKSNAMEICLTGN 93
           + GG  L   CD+I A + A F  P  ++G     GG +    T   G   A EI  TG 
Sbjct: 132 ISGGLLLCWPCDLILASDDALFSDPVALMGI----GGVEYHGHTWELGPRKAKEILFTGR 187
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             TA+EA+  G+V+++   ++L  +T +LAE+I    P  + Q K AVN
Sbjct: 188 ALTAEEAERTGMVNRVVARDELDAQTRELAEQIATMPPFALRQAKRAVN 236

>pdb|3GKB|A Chain A, Crystal Structure Of A Putative Enoyl-coa Hydratase From Streptomyces Avermitilis Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Query: 37  GGGCE-LAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           GGG E +A       A E A  GQ E ++G +PG GGTQ L    G++ A+E+ LT + F
Sbjct: 119 GGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLF 178
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD-TEGL 149
            A+ A   G +++  P ++L E   ++A  I      ++   K ++  DD  EGL
Sbjct: 179 DAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIEAAKRSLPADDLKEGL 233

>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG ELA+ CDI+ A E A+F      +G +P  G + RL +  G   A  + LTG+  +A
Sbjct: 105 GGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSA 164
Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERI-GEHSPLIVTQVKEAVNIDDTE 147
            +A   G+V+++ P ++LL     +A  I G +   +   +     IDD +
Sbjct: 165 ADALRAGLVTEVVPHDQLLGAAQAVAASIVGNNQNAVRALLASYHRIDDAQ 215

>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG ELA+ CDI+ A E A+F      +G +P  G + RL +  G   A  + LTG+  +A
Sbjct: 122 GGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSA 181
Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERI-GEHSPLIVTQVKEAVNIDDTE 147
            +A   G+V+++ P ++LL     +A  I G +   +   +     IDD +
Sbjct: 182 ADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSYHRIDDAQ 232

>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1 Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 57/109 (52%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +  +CD+++A EKA F  P    G  P    +    +  GK++A E+ + G + 
Sbjct: 131 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 190
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
           TA+EA   G+VS++F      +E +   + +  ++P+++ + K  V  +
Sbjct: 191 TAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCN 239

>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium Tuberculosis Length = 339

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 25  KFIQCLKIWIYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKS 83
           K + CL      GGG  L ++CD+  A  E A+F Q +  +G+  G  G+  L R  G+ 
Sbjct: 173 KVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQK 232
Query: 84  NAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI 143
            A EI   G  +TA++  +MG V+ +    +L    ++ A  I   SP     +K A N+
Sbjct: 233 FAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNL 292
Query: 144 DD 145
            D
Sbjct: 293 LD 294

>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In Vitamin K2 Biosynthesis Length = 314

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 25  KFIQCLKIWIYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKS 83
           K + CL      GGG  L ++CD+  A  E A+F Q +  +G+  G  G+  L R  G+ 
Sbjct: 148 KVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQK 207
Query: 84  NAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI 143
            A EI   G  +TA++  +MG V+ +    +L    ++ A  I   SP     +K A N+
Sbjct: 208 FAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNL 267
Query: 144 DD 145
            D
Sbjct: 268 LD 269

>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 334

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 25  KFIQCLKIWIYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKS 83
           K + CL      GGG  L ++CD+  A  E A+F Q +  +G+  G  G+  L R  G+ 
Sbjct: 168 KVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQK 227
Query: 84  NAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI 143
            A EI   G  +TA++  +MG V+ +    +L    ++ A  I   SP     +K A N+
Sbjct: 228 FAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNL 287
Query: 144 DD 145
            D
Sbjct: 288 LD 289

>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAM-EICLTGNQ 94
           +GGG +L   CDI Y  + A F   E+ +G     G  QRL +  G  + + E+  T  +
Sbjct: 146 IGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARK 205
Query: 95  FTAQEAKEMGVVSKIFPP-EKLLEETIKLAERIGEHSPLIVTQVK 138
             A EA   G+VS++FP  E +L+  + LA  I   SP+ V   K
Sbjct: 206 MMADEALGSGLVSRVFPDKEVMLDAALALAAEISSKSPVAVQSTK 250

>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa Length = 727

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 46  CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGV 105
           C    A  KA+ G PE+ +G +PGA GTQ L R  G   A+++  +G   +A EA  +G+
Sbjct: 113 CHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGI 172
Query: 106 VSKIFPPEKLLEETIKLAERI 126
           +  +   +  +EE IK A++I
Sbjct: 173 LDAVVKSDP-VEEAIKFAQKI 192

>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpmfe1) In Apo Form Length = 742

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 46  CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGV 105
           C    A  KA+ G PE+ +G +PGA GTQ L R  G   A+++  +G   +A EA  +G+
Sbjct: 128 CHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGI 187
Query: 106 VSKIFPPEKLLEETIKLAERI 126
           +  +   +  +EE IK A++I
Sbjct: 188 LDAVVKSDP-VEEAIKFAQKI 207

>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           +  G G  LA+  D+  A   A F    + IG +P +G +  L R  G + A E+ L   
Sbjct: 101 VAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSP 160
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
           + +A+EA  +G+V ++ P EKL+EE + LA+ + +
Sbjct: 161 RLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQ 195

>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIG-TMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
           +GGG  LA+ CD+  A + A F    I  G T    G +  L RA G S A +I LTG  
Sbjct: 135 IGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRD 194
Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS 130
             A EA+ +G+VS+    E LLEE   + ERI   S
Sbjct: 195 VDADEAERIGLVSRKVASESLLEECYAIGERIAGFS 230

>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy Length = 260

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 55/106 (51%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +  +CD+++A EKA F  P    G  P    +    +  GK++A E+ + G + 
Sbjct: 112 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 171
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           TA+EA   G+VS++F      +E +   + +  ++ +++ + K  V
Sbjct: 172 TAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALV 217

>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpmfe1) Complexed With 2trans-hexenoyl-coa Length = 742

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 46  CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGV 105
           C    A  KA+ G P + +G +PGA GTQ L R  G   A+++  +G   +A EA  +G+
Sbjct: 128 CHYRIANAKARVGLPAVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGI 187
Query: 106 VSKIFPPEKLLEETIKLAERI 126
           +  +   +  +EE IK A++I
Sbjct: 188 LDAVVKSDP-VEEAIKFAQKI 207

>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I  G G +     DI+ A E+A F  P + IG + G     R++R   +S A+ + L G 
Sbjct: 120 ICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVAGRE-LVRVSRVLPRSIALRMALMGK 178
Query: 94  --QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
             + +AQ A E+G++S+I   ++LLE   ++A+ +  ++PL V   + A+     +GLN
Sbjct: 179 HERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAI----LKGLN 233

>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding Homologue Of Enoyl-Coa Hydratase Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 46  CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGV 105
           CDI  A   AK G  E  +  +PG GGTQRL RA G S A E+  +      +EAK +G+
Sbjct: 127 CDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGL 186
Query: 106 VSKIFPP----EKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +S +       +    + + LA       P+ +   K A+N
Sbjct: 187 ISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAIN 227

>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  LA+  DI    E+ ++  P++  G  P A     L R  G + A E+ LTG  F
Sbjct: 110 IGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASF 169
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           +AQ A E G+ ++  P  K+L   +++A  I
Sbjct: 170 SAQRAVETGLANRCLPAGKVLGAALRMAHDI 200

>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIG---TMPGAGGTQRLTRAAGKSNAMEICL 90
           I    GC+L  MCD+  A   A+F    I +G   + PG      L+R  G+  A E+ +
Sbjct: 129 IATAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVA----LSRNVGRKAAFEMLV 184
Query: 91  TGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           TG   +A +AK +G+V+++  P+ L +E   +  +I
Sbjct: 185 TGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKI 220

>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of Rpfc Length = 305

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E A+ C  I A E    G PE++    PG G    + +      A +I L GN +
Sbjct: 152 LGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLY 211
Query: 96  TAQEAKEMGVVSKIFPPEK---LLEETIKLAERIGEHSPLIVTQVKE 139
           +A++   MG+V ++ P  +    +E+ I+ ++R   H+   + QV+E
Sbjct: 212 SAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKRT-PHAWAAMQQVRE 257

>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           +  GGG  +++  D+    + AKF      IG       +  L R  G   AME+ LT  
Sbjct: 110 VAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNR 169
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
               +EAK+ G+VS+++P ++  E   K+A  +      +    KE
Sbjct: 170 TLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKE 215

>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           +  GGG  +++  D+    + AKF      IG       +  L R  G   AME+ LT  
Sbjct: 110 VAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNR 169
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
               +EAK+ G+VS+++P ++  E   K+A  +      +    KE
Sbjct: 170 TLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKE 215

>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 48/106 (45%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           +  GGG  +++  D+    + AKF      IG       +  L R  G   AME+ LT  
Sbjct: 110 VAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTDR 169
Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
               +EAK+ G+VS+++P ++  E   K+A  +      +    KE
Sbjct: 170 TLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKE 215

>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 42  LAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAK 101
           LA+ CD     EKA F    I +G +P AG    L R  G++ A+E+ + G + TA+EA 
Sbjct: 112 LALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAA 171
Query: 102 EMGVVSKIFPPEKLLEETIKLAERIG 127
            +G+ +K+ P     EE  + AER+ 
Sbjct: 172 ALGLATKVIPLSDWEEEVKQFAERLS 197

>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G GC L  + DI+Y  E A    P + +G +   GG            A E  LTG + 
Sbjct: 134 VGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRI 193
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI 143
           +AQ A E+G+ + +   +  + E I  A++I E     V   K  +NI
Sbjct: 194 SAQRAVELGLANHV--ADDPVAEAIACAKKILELPQQAVESTKRVLNI 239

>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG ELA    I  A   A +  PE   G   G GG+ RL R  G +   ++ LTG  +
Sbjct: 118 IGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVY 177
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           +A E    G    +       ++ ++L  R+ +++PL    V +A+
Sbjct: 178 SAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQAL 223

>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG ELA+ CD+  A + A FG      G     GGT RL R  G S AM++ LTG   
Sbjct: 110 VAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRAV 169
Query: 96  TAQEAKEMGVVSKIFP 111
            A EA  +G+ +++ P
Sbjct: 170 QADEALAIGLANRVVP 185

>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From Mycobacterium Marinum Length = 265

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 61/117 (52%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           L GG ELA+  D+I A   + FG PE+  G + G GG  RL      + AME+ LTG+  
Sbjct: 114 LAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNL 173
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLNHR 152
           +A+ A  +G+V+ +  P   L+  I LAE+I  + PL V   K  +       L+ R
Sbjct: 174 SAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLDTR 230

>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis, Iodide Soak Length = 333

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 10  LIDYEQKDLYRSKNLKFIQC-----LKIWIY-LGGGCELAMMCDIIYAGEKAKFGQPEII 63
           ++DY+    +       + C     +KI  Y + GG ++A+  D + A   AK G P + 
Sbjct: 137 MVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMR 196
Query: 64  IGTMPGAG-GTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKL 122
           +  +P AG    RL    G   A  +  TG+  T  +A E G+  +   P  L   T +L
Sbjct: 197 VWGVPAAGLWAHRL----GDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERL 252
Query: 123 AERIG 127
            ERI 
Sbjct: 253 VERIA 257

>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 46  CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGV 105
           CDI  A   A+F   E+ +G +P A  +  + RA G+  A  + ++   F A  A  + +
Sbjct: 121 CDIAIASTSARFCFSEVKLGLIP-AVISPYVVRAIGERAAKMLFMSAEVFDATRAYSLNL 179
Query: 106 VSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE 139
           V    P + LLE T+K A +I  ++P  V   K+
Sbjct: 180 VQHCVPDDTLLEFTLKYASQISNNAPEAVKNSKQ 213

>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Halodurans Length = 263

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 37  GGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
           GGG  + + CD   A  +AKF +    +G  P  G +  L R  G    M + L G  FT
Sbjct: 114 GGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFT 173
Query: 97  AQEAKEMGVVSKIFPPEKLLEETIK 121
           ++EA  +G++ +I   ++ L+E +K
Sbjct: 174 SEEALRLGLIQEICENKQELQERVK 198

>pdb|1O8U|A Chain A, The 2 Angstrom Structure Of 6-oxo Camphor Hydrolase: New Structural Diversity In The Crotonase Superfamily Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 41  ELAMMCDIIYAGEKAKFGQ-PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQE 99
           E+ +M DI+ A E A F   P    G +PG G         G +      LTG +  A+ 
Sbjct: 124 EIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDART 183
Query: 100 AKEMGVVSKIFPPEKLLEETIKLAERIGEHSPL--------IVTQVKEAVNIDDTEGLNH 151
           A + G V+++   ++LL    +LA  I E   L        +  Q++  +  D + GL H
Sbjct: 184 ALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGLAH 243

>pdb|1SZO|A Chain A, Crystal Structure Analysis Of The 6-Oxo Camphor Hydrolase His122ala Mutant Bound To Its Natural Product (2s,4s)- Alpha-Campholinic Acid Length = 257

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 41  ELAMMCDIIYAGEKAKFGQ-PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQE 99
           E+ +M DI+ A E A F   P    G +PG G         G +      LTG +  A+ 
Sbjct: 124 EIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDART 183
Query: 100 AKEMGVVSKIFPPEKLLEETIKLAERIGEHSPL--------IVTQVKEAVNIDDTEGLNH 151
           A + G V+++   ++LL    +LA  I E   L        +  Q++  +  D + GL H
Sbjct: 184 ALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGLAH 243

>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 262

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 36  LGGGCELAMMCDIIYAGEKA-------KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEI 88
           + GG ELA+ CD+    E A       ++G P I        GGT RL R  G S AM++
Sbjct: 113 VAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLI-------DGGTIRLPRLIGHSRAMDL 165
Query: 89  CLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
            LTG    A EA ++G+V+++    +  E    LA  I
Sbjct: 166 ILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEI 203

>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The Cyanobacterium Anabaena Sp. Pcc 7120 Length = 263

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 40  CELAMMCDIIYAGEKAKF-GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ 98
            E  +  DII A E   F   P +  G +PG G       A G         T  + TAQ
Sbjct: 132 SEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQ 191
Query: 99  EAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           +A E+ VV ++ P  KL+E   ++A  + +   L +   + A+
Sbjct: 192 QAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVAL 234

>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The Cyanobacterium Anabaena Sp. Pcc 7120 Length = 263

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 40  CELAMMCDIIYAGEKAKF-GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ 98
            E  +  DII A E   F   P +  G +PG G       A G         T  + TAQ
Sbjct: 132 SEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQ 191
Query: 99  EAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
           +A E+ VV ++ P  KL+E   ++A  + +   L +   + A+
Sbjct: 192 QAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVAL 234

>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +    D+ +    A+   P   +G  P A  +  L +  G+ NA  + ++    
Sbjct: 111 VGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWI 170
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAE 124
            A+EA  MG+V +I  PE+LL E  + AE
Sbjct: 171 DAEEALRMGLVWRICSPEELLPEARRHAE 199

>pdb|2PG8|A Chain A, Crystal Structure Of R254k Mutanat Of Dpgc With Bound Substrate Analog Length = 417

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG +L ++ D + A   A F  P    G +PGA    RL R AG   + ++ L G + 
Sbjct: 285 IGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAANL-RLGRFAGPRVSRQVILEGRRI 343
Query: 96  TAQEAKEMGVVSKIFPPEKL 115
            A+E +   +V ++  P++L
Sbjct: 344 WAKEPEARLLVDEVVEPDEL 363

>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From Mycobacterium Marinum Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 12  DYEQKDLYRSKNLKFIQCLKIWIY-------LGGGCELAMMCDIIYAGEKAKFGQPEIII 64
           D    DL   +   F+  L+  +        +G G   A+MCD+ +A   AKF       
Sbjct: 111 DANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARR 170
Query: 65  GTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAE 124
           G +   G +  L R    + A+++ L+G  F A+EA ++G+V ++  PE+L+   ++ AE
Sbjct: 171 GLIAEFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAE 230
Query: 125 RIGEH-SPLIVTQVKEAVNIDDTE 147
            I  + SP  +  +K  V  D T 
Sbjct: 231 DIARYCSPSSMAVIKRQVYGDATR 254

>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G GC LA+ CD++ A   + F      +G MP  G +  L    G++    + +T  + 
Sbjct: 104 VGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKI 163
Query: 96  TAQEAKEMGVVSKI 109
           +A  A E G++S I
Sbjct: 164 SAATAFEWGMISHI 177

>pdb|2NP9|A Chain A, Crystal Structure Of A Dioxygenase In The Crotonase Superfamily Length = 440

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG +L ++ D + A   A F  P    G +PGA    RL R AG   + ++ L G + 
Sbjct: 296 IGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAANL-RLGRFAGPRVSRQVILEGRRI 354
Query: 96  TAQEAKEMGVVSKIFPPEKL 115
            A+E +   +V ++  P++L
Sbjct: 355 WAKEPEARLLVDEVVEPDEL 374

>pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE FAMILY Protein From Silicibacter Pomeroyi Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 13/109 (11%)
Query: 24  LKFIQCLKIWIYL------GGGCELAMMCDIIYAGEKAKFGQPEIIIG---TMPGAGGTQ 74
           L    C K  I L        G +L   CD+ YA   A+F  P +  G   T P      
Sbjct: 98  LDLAHCPKPTIALVEGIATAAGLQLXAACDLAYASPAARFCLPGVQNGGFXTTPAVA--- 154
Query: 75  RLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLA 123
            ++R  G+    E  LTG  + A  A   G++++I P   L      LA
Sbjct: 155 -VSRVIGRRAVTEXALTGATYDADWALAAGLINRILPEAALATHVADLA 202

>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 53  EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP 112
           +  K   PE+ IG +P  GGT  L+RA GK   +   LTG  F+  +A  MG      P 
Sbjct: 134 DTTKMAMPEVGIGFIPDVGGTYLLSRAPGKLG-LHAALTGAPFSGADAIVMGFADHYVPH 192
Query: 113 EKLLEET 119
           +K+ E T
Sbjct: 193 DKIDEFT 199

>pdb|2W3P|A Chain A, Boxc Crystal Structure Length = 556

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 16  KDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYA--GEKAKFGQPEI-IIGTMPGAGG 72
           +D  R   LKF+  +      GGG ELA+ CD IY      +    PE+ ++G +PG GG
Sbjct: 122 EDSSRHSGLKFLAAVN-GACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGG 180
Query: 73  TQRLT--RAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL 115
             R+T  R      A   C        + AK   +V ++  P + 
Sbjct: 181 LTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQF 225

>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I  GGG  L++      A EK  F  PE  IG  P  GG   L R  GK     + LTG 
Sbjct: 112 ITXGGGVGLSVHGQFRVATEKCLFAXPETAIGLFPDVGGGYFLPRLQGKLGYF-LALTGF 170
Query: 94  QFTAQEAKEMGVVSKIFPPEKL--LEETI 120
           +   ++    G+ +     EKL  LEE +
Sbjct: 171 RLKGRDVYRAGIATHFVDSEKLAXLEEDL 199

>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2 Enoyl Coa Isomerase (Peci) Length = 280

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 49/115 (42%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G    L  + D +YA ++A F  P   +G  P    +    +    + A E  + G + 
Sbjct: 133 VGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIXSPAKATEXLIFGKKL 192
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
           TA EA   G+V+++FP     +E     +   +  P  +   KE +   + E L+
Sbjct: 193 TAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLH 247

>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G +LAM CD+      A F  P    G        +RL+   G   A  + L+  + 
Sbjct: 119 IGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKL 178
Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
           TA+ A   G+ ++I      L +    A  I   +PL +   K  +N D
Sbjct: 179 TAEIALHTGMANRI----GTLADAQAWAAEIARLAPLAIQHAKRVLNDD 223

>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG  L   CDI  AG ++ F   E  IG  P       L + + ++ A    LTG +F A
Sbjct: 122 GGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLPKLSARA-AARYYLTGEKFDA 180
Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP 131
           + A+E+G+++     E L     +L   +G  SP
Sbjct: 181 RRAEEIGLIT--MAAEDLDAAIDQLVTDVGRGSP 212

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	3e-66
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	9e-66
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	1e-65
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	2e-65
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	2e-65
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	4e-65
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	2e-64
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	3e-64
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	2e-63
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	4e-63
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	5e-63
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	8e-63
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	8e-63
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	1e-62
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	1e-62
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	2e-62
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	2e-62
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	4e-61
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	4e-61
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	1e-60
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	2e-60
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	2e-59
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	2e-59
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	3e-59
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	3e-59
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	4e-59
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	6e-59
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	2e-58
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	1e-57
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	4e-57
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	6e-57
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	6e-57
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	1e-56
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	2e-56
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	2e-56
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	4e-56
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	4e-56
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	1e-55
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	2e-55
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	3e-55
3t3w_A	279	Probable enoyl-COA hydratase; ssgcid, structural g	3e-55
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	4e-54
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	1e-53
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	2e-53
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	3e-52
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	5e-52
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	7e-52
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	2e-51
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	3e-51
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	5e-51
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	9e-51
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	1e-50
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	3e-50
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	2e-49
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 11251J, struct	4e-49
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	3e-48
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	3e-48
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	7e-47
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	1e-46
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	2e-46
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	4e-46
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	3e-43
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	1e-41
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	1e-41
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	3e-41
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	2e-11
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	1e-39
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	9e-39
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	6e-34
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	3e-30
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	1e-29
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	4e-29
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	1e-08
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	3e-08

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260

 Score =  201 bits (513), Expect = 3e-66
 Identities = 75/107 (70%), Positives = 92/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 109 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 168

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct: 169 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 215

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263

 Score =  200 bits (510), Expect = 9e-66
 Identities = 59/107 (55%), Positives = 80/107 (74%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAM+CD++ A + A+FGQPEI +G +PG GGTQRLTRA GK+ AM++CLTG   
Sbjct: 112 LGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSL 171

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA+EA+ +G+VS+I P   LL+E + +A+RI   S      VK+A+N
Sbjct: 172 TAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAIN 218

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261

 Score =  199 bits (509), Expect = 1e-65
 Identities = 46/107 (42%), Positives = 64/107 (59%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E AM C + +A E AK G PE+ +G +PG  GTQRL R  GK+ A E+ LT    
Sbjct: 110 LGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPI 169

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           T  EA + G+V+ +F  E  L++T+K+A++I   SP     V E + 
Sbjct: 170 TGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLELLQ 216

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258

 Score =  199 bits (508), Expect = 2e-65
 Identities = 54/107 (50%), Positives = 77/107 (71%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ CD+I A   A+FG PE+ +G MPGAGGTQRLT+  G   A+E   TG + 
Sbjct: 107 LGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARM 166

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A+EA+++G+V+++  PE L+EET++LA R+ E  PL +  +KEAV 
Sbjct: 167 SAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALRLIKEAVQ 213

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278

 Score =  199 bits (509), Expect = 2e-65
 Identities = 57/107 (53%), Positives = 72/107 (67%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCD++ A + AKFGQPEI +G +PG GG+QRLTRA GK+ AM++ LTG   
Sbjct: 127 LGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTM 186

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+  G+VS++ P + LL E    A  I + S       KEAVN
Sbjct: 187 DAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVN 233

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277

 Score =  198 bits (507), Expect = 4e-65
 Identities = 38/107 (35%), Positives = 56/107 (52%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LG G  LA+  D   +G+  KFG  EI+ G +PG GG  RLTR  G S A E+  +G  F
Sbjct: 127 LGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFF 186

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EA  +G++  +  P+ + +  +  A R  E  P  +   K  +N
Sbjct: 187 DAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVIN 233

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261

 Score =  196 bits (501), Expect = 2e-64
 Identities = 32/107 (29%), Positives = 53/107 (49%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            GG  E+ M  D+I A   + F    + +G      G   LTR AG     E+  T +  
Sbjct: 108 WGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPI 167

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TAQ A  +G+++ +   E+L + T+++A  I E +PL +  +KE + 
Sbjct: 168 TAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELR 214

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265

 Score =  196 bits (500), Expect = 3e-64
 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCE+    DI  + E A FG PE+  G +PGAG   RL R    + AME+ LTG   
Sbjct: 114 LGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPL 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
           TA EA   G+V  + P    L++   LA+RI  + PL V   KEA+     + + +    
Sbjct: 174 TAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAI 233

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276

 Score =  194 bits (496), Expect = 2e-63
 Identities = 33/107 (30%), Positives = 54/107 (50%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            GGG    + CD+    ++A FG  EI  G  PG   ++ +    G   ++   +TG  F
Sbjct: 118 FGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTF 177

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             Q+A EMG+V++  P  +L E TI+LA  + E +P+++   K    
Sbjct: 178 GGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFK 224

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265

 Score =  193 bits (492), Expect = 4e-63
 Identities = 48/107 (44%), Positives = 65/107 (60%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG EL++ CD   A E A  G  E  +  +PGAGGTQRL R  G   A E+  TG + 
Sbjct: 114 LGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRI 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQEAKE G+V  + P   L E+ I++AE+I  + P+ V   KEA++
Sbjct: 174 SAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAIS 220

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275

 Score =  193 bits (493), Expect = 5e-63
 Identities = 31/107 (28%), Positives = 50/107 (46%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG ELA    I  A   A +  PE   G   G GG+ RL R  G +   ++ LTG  +
Sbjct: 118 IGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLTGRVY 177

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A E    G    +       ++ ++L  R+ +++PL    V +A+ 
Sbjct: 178 SAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQALP 224

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278

 Score =  193 bits (492), Expect = 8e-63
 Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG E+    DI  A E AKFG  E      P  G   RL R    + A ++ LTG   
Sbjct: 127 IAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHI 186

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
           TA EAKEMG+V  + P  + L + +++AE I  + PL V  +   +     + + E    
Sbjct: 187 TAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQAILRTIRETEGMHENEAFKI 246

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265

 Score =  192 bits (491), Expect = 8e-63
 Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           L  G ELA+  DI+ A E A F Q E+  G  P  G T R  R AG  NAM   LT + F
Sbjct: 114 LTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTF 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
            A EA  +G+V +I P  + ++  I +A+ I   +PL V              D      
Sbjct: 174 DAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQ 233

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265

 Score =  192 bits (490), Expect = 1e-62
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 4/120 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           L GG ELA+  D+I A   + FG PE+  G + G GG  RL      + AME+ LTG+  
Sbjct: 114 LAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNL 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
           +A+ A  +G+V+ +  P   L+  I LAE+I  + PL V   K  +              
Sbjct: 174 SAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLDTRFAQ 233

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256

 Score =  191 bits (488), Expect = 1e-62
 Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           L GG EL + CD++ AG  AKFG PE+  G + GAGG  RL        AME+ LTG  F
Sbjct: 105 LAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESF 164

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
           TA++A + G ++++    + L+  ++LA +I  + PL V   K  +         E    
Sbjct: 165 TAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATKRIIIESASWAPEEAFAK 224

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256

 Score =  191 bits (488), Expect = 2e-62
 Identities = 34/107 (31%), Positives = 57/107 (53%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG ELA+ CDI+ A E AKF      +G MP  G + RL +  G   A  + LTG+  
Sbjct: 104 VTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYL 163

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+A   G+V+++   + LL    ++A  I  ++   V  + ++ +
Sbjct: 164 SAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRALLDSYH 210

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258

 Score =  191 bits (488), Expect = 2e-62
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
              G EL +  DI  A    +F   E++ G  P  G T R  RAAG ++AM   LTG++F
Sbjct: 117 WTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEF 176

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGL 149
            A EA  M +++++  P + L   ++ AERI   +PL V    ++        D   L
Sbjct: 177 DADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVRAALQSAFQGRDEGDDAAL 234

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287

 Score =  188 bits (481), Expect = 4e-61
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 2/116 (1%)

Query: 36  LGGGCELAMMCDIIYA-GEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
            GGG E     D+ +A  E A  GQ E ++G +PG GGTQ L    G++ A+E+ LT + 
Sbjct: 118 RGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADL 177

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD-TEGL 149
           F A+ A   G +++  P ++L E   ++A  I      ++   K ++  DD  EGL
Sbjct: 178 FDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIEAAKRSLPADDLKEGL 233

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250

 Score =  187 bits (478), Expect = 4e-61
 Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G + A+M D       A F  PE+  G     G    L    G S   EI       
Sbjct: 106 IGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAAI-LGFTHGFSTMQEIIYQCQSL 164

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A    +  +V+++     LL+  I  A  +  +        K AVN
Sbjct: 165 DAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRAVN 211

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265

 Score =  187 bits (477), Expect = 1e-60
 Identities = 42/108 (38%), Positives = 69/108 (63%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKA-KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
           +GGG E+A+ CD+ + G++A K G PE+ +G + G GGTQRL R  G S A+++ +TG  
Sbjct: 113 VGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGET 172

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            T QEA E+G+V+++FP  +  E T + A ++   +   V+ +K A+ 
Sbjct: 173 ITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVSNIKLAIM 220

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289

 Score =  187 bits (477), Expect = 2e-60
 Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 36  LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
            G G E  + CD+ +A  E A  GQPE+ IG  PGAG  Q LTR  G+  A+E  LT + 
Sbjct: 115 RGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSD 174

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN---IDDTEGL 149
           F A  A+  G V++  P  +L E    +A R+       +   K A+N   +     +
Sbjct: 175 FDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALIAAKSAINAISLPAPAEV 232

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243

 Score =  183 bits (467), Expect = 2e-59
 Identities = 21/107 (19%), Positives = 45/107 (42%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            GGG  L +  D +   +++ +    +  G  P    +  L    G   A E+  TG  +
Sbjct: 102 FGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENY 161

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +E  E G+   +   + +L    +L ++I +   L +  +K+ ++
Sbjct: 162 RGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLVALKQHLS 208

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274

 Score =  184 bits (469), Expect = 2e-59
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ- 94
            G G +     DI+ A E+A F  P + IG + G     R++R   +S A+ + L G   
Sbjct: 122 CGAGMDWVTTTDIVIASEQATFFDPHVSIGLVAG-RELVRVSRVLPRSIALRMALMGKHE 180

Query: 95  -FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGL 149
             +AQ A E+G++S+I   ++LLE   ++A+ +  ++PL V   + A+     +   E  
Sbjct: 181 RMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLHEAE 240

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253

 Score =  183 bits (466), Expect = 3e-59
 Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG  LA+ CD++   E+A+ G  E+ IG +     +  L RA G+  A ++ LTG   
Sbjct: 106 VAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGEKAAKDLLLTGRLV 164

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EAK +G+V++I PP K LEE   LAE + +++P  +   KE + 
Sbjct: 165 EAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELLL 211

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275

 Score =  183 bits (467), Expect = 3e-59
 Identities = 42/110 (38%), Positives = 63/110 (57%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L ++CD+  A + A FGQ    +G+  G  G+  L R  G+  A EI     Q+
Sbjct: 121 IGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQY 180

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
           +AQEA+ MG+V+ + P ++L EE I+ A+ I   SPL +  +K A N D 
Sbjct: 181 SAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADC 230

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267

 Score =  183 bits (466), Expect = 4e-59
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 7/123 (5%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+  D++ A E+A+FG PE+  G +  AGG  R+     +  AM + LTG   
Sbjct: 113 LGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPL 172

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE-------AVNIDDTEG 148
           +A  A++ G+++++     +L+  + LA  I  ++PL V   K         V + D  G
Sbjct: 173 SAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPG 232

Query: 149 LNH 151
            + 
Sbjct: 233 WDR 235

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272

 Score =  183 bits (466), Expect = 6e-59
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ CDI  A   AK G  E  +  +PG GGTQRL RA G S A E+  +    
Sbjct: 117 LGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVL 176

Query: 96  TAQEAKEMGVVSKIFPPEK----LLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +EAK +G++S +    +       + + LA       P+ +   K A+N
Sbjct: 177 DGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAIN 227

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289

 Score =  182 bits (464), Expect = 2e-58
 Identities = 37/110 (33%), Positives = 61/110 (55%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L MMCD+  A + A FGQ    +G+  G  G   + R  G+  A EI     Q+
Sbjct: 135 IGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQY 194

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
            A++A +MG+V+ + P   L +ET++    + ++SP+ +  +K A+N D 
Sbjct: 195 DAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC 244

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290

 Score =  180 bits (458), Expect = 1e-57
 Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPG-AGGTQRLTRAAGKSNAMEICLTGNQ 94
           +GGG  LA+ CD+  A + A F    I  G      G +  L RA G S A +I LTG  
Sbjct: 135 IGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRD 194

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             A EA+ +G+VS+    E LLEE   + ERI   S   +   K  + 
Sbjct: 195 VDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIELTKRTIW 242

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262

 Score =  177 bits (452), Expect = 4e-57
 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG ELA+ CD+    E A  G      G     GGT RL R  G S AM++ LTG   
Sbjct: 113 VAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPV 172

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN----IDDTEGLNH 151
            A EA ++G+V+++    +  E    LA  I       V   +++      + +   L++
Sbjct: 173 HANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDN 232

Query: 152 R 152
            
Sbjct: 233 E 233

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269

 Score =  177 bits (452), Expect = 6e-57
 Identities = 29/107 (27%), Positives = 48/107 (44%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            GGG  +++  D+    + AKF      IG       +  L R  G   AME+ LT    
Sbjct: 112 AGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTL 171

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             +EAK+ G+VS+++P ++  E   K+A  +      +    KE  +
Sbjct: 172 YPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFH 218

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273

 Score =  177 bits (452), Expect = 6e-57
 Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 1/114 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG  L ++CD+  A + A FGQ    +G+     G+  L R  G   A EI     Q+
Sbjct: 119 VGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQY 178

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
            AQEA +MG+V+ + P EK+ +ET++  + I +HSP  +  +K A+N  DT+GL
Sbjct: 179 NAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMN-ADTDGL 231

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261

 Score =  176 bits (449), Expect = 1e-56
 Identities = 32/107 (29%), Positives = 56/107 (52%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +  +CD+++A EKA F  P    G  P    T    +  G ++A E+ L+G + 
Sbjct: 113 IGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKL 172

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TAQEA   G+VS++F P    +E +   + +   +P+++ + K  V 
Sbjct: 173 TAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVR 219

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305

 Score =  177 bits (451), Expect = 2e-56
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E A+ C  I A E    G PE++    PG G    + +      A +I L GN +
Sbjct: 152 LGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLY 211

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A++   MG+V ++ P  + +    ++  R  + +P     +++   
Sbjct: 212 SAEQLLGMGLVDRVVPRGQGVAAVEQVI-RESKRTPHAWAAMQQVRE 257

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291

 Score =  177 bits (450), Expect = 2e-56
 Identities = 29/107 (27%), Positives = 56/107 (52%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +  +CD+++A EKA F  P    G  P    +    +  GK++A E+ + G + 
Sbjct: 131 IGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKL 190

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA+EA   G+VS++F      +E +   + +  ++P+++ + K  V 
Sbjct: 191 TAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVR 237

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260

 Score =  175 bits (446), Expect = 4e-56
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 2/109 (1%)

Query: 36  LGGGCELAMMCDIIYAGEKAKF--GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
             GGC +A+ CD     +  ++  G  E  +G +        L    G   A      G 
Sbjct: 109 PAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGL 168

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            F   EA ++G+V ++ P E++    +    +            K  + 
Sbjct: 169 LFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMR 217

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275

 Score =  175 bits (447), Expect = 4e-56
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAG-KSNAMEICLTGNQ 94
           +GGG +L   CDI Y  + A F   E+ +G     G  QRL +  G +S   E+  T  +
Sbjct: 119 IGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARK 178

Query: 95  FTAQEAKEMGVVSKIFP-PEKLLEETIKLAERIGEHSPLIVTQVKEAVN--IDDT--EGL 149
             A EA + G+VS++FP  + +L     LA  I   SP+ V   K  +    D +  E L
Sbjct: 179 MMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESL 238

Query: 150 NH 151
           ++
Sbjct: 239 DY 240

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287

 Score =  175 bits (445), Expect = 1e-55
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
              GC+L   CDI  A +K+ F  P + +G      G   L RA  +  A+E+  TG   
Sbjct: 138 TAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPI 196

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQEA   G++SK+ P  +L EET+++A +I   S  +V+  K    
Sbjct: 197 SAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFY 243

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276

 Score =  174 bits (443), Expect = 2e-55
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G GC L  + DI+Y  E A    P + +G +   GG            A E  LTG + 
Sbjct: 134 VGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRI 193

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ A E+G+ + +      + E I  A++I E     V   K  +N
Sbjct: 194 SAQRAVELGLANHVAD--DPVAEAIACAKKILELPQQAVESTKRVLN 238

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256

 Score =  173 bits (440), Expect = 3e-55
 Identities = 28/107 (26%), Positives = 48/107 (44%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +    D+ +    A+   P   +G  P A  +  L +  G+ NA  + ++    
Sbjct: 111 VGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWI 170

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+EA  MG+V +I  PE+LL E  + AE +       +  VK  + 
Sbjct: 171 DAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLMAVKHTMV 217

>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279

 Score =  173 bits (441), Expect = 3e-55
 Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG  L   CD+I A E A F  P +++    G       T   G   A EI  TG   
Sbjct: 129 ISGGLLLCWPCDLIIAAEDALFSDPVVLMDI--GGVEYHGHTWELGPRKAKEILFTGRAM 186

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID-DTEGL 149
           TA+E  + G+V+++ P ++L  ET  LA  I +  P  + Q K AVN   D +G 
Sbjct: 187 TAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVNQTLDVQGF 241

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264

 Score =  170 bits (433), Expect = 4e-54
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 6/116 (5%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G +LAM CD+      A F  P    G        +RL+   G   A  + L+  + 
Sbjct: 119 IGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKL 178

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT--EGL 149
           TA+ A   G+ ++I      L +    A  I   +PL +   K  +N D    E  
Sbjct: 179 TAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQHAKRVLNDDGAIEEAW 230

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233

 Score =  168 bits (427), Expect = 1e-53
 Identities = 18/115 (15%), Positives = 31/115 (26%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +  G  L    D   A         E+ IG        + L      S   +       F
Sbjct: 107 IAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTF 166

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
             + A   G + +I  PE +L    + A      +       K     +  + + 
Sbjct: 167 FGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHNATKLRARAEALKAIR 221

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440

 Score =  173 bits (440), Expect = 2e-53
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +GGG +L ++ D + A   A F  P    G +PG     RL R AG   + ++ L G + 
Sbjct: 296 IGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPG-AANLRLGRFAGPRVSRQVILEGRRI 354

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+E +   +V ++  P++L     +   R+   + L   ++    +
Sbjct: 355 WAKEPEARLLVDEVVEPDELDAAIERSLTRLDGDAVLANRRMLNLAD 401

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265

 Score =  165 bits (421), Expect = 3e-52
 Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 1/117 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  LA+  DI    E+ ++  P++  G  P A     L R  G + A E+ LTG  F
Sbjct: 110 IGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASF 169

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH-SPLIVTQVKEAVNIDDTEGLNH 151
           +AQ A E G+ ++  P  K+L   +++A  I  + +P      K  +      G++ 
Sbjct: 170 SAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSA 226

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232

 Score =  164 bits (417), Expect = 5e-52
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
           +  G  L +  D           G  E+ IG      G +       KS      +    
Sbjct: 106 VAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAEM 165

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           F  + A   G + K+   E+L    + +A ++ + +     + K  V 
Sbjct: 166 FDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVR 213

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257

 Score =  164 bits (418), Expect = 7e-52
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQ-PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
           +    E+ +M DI+ A E A F   P    G +PG G         G +      LTG +
Sbjct: 119 VTNAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQE 178

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             A+ A + G V+++   ++LL    +LA  I E   L     ++ + 
Sbjct: 179 LDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLT 226

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286

 Score =  164 bits (417), Expect = 2e-51
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
              GC+L  MCD+  A   A+F    I +G      G   L+R  G+  A E+ +TG   
Sbjct: 131 TAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVA-LSRNVGRKAAFEMLVTGEFV 189

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A +AK +G+V+++  P+ L +E   +  +I       V   K    
Sbjct: 190 SADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVAMGKALFY 236

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263

 Score =  163 bits (414), Expect = 3e-51
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 1/106 (0%)

Query: 38  GGCELAMMCDIIYAGEKAKF-GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFT 96
              E  +  DII A E   F   P +  G +PG G       A G         T  + T
Sbjct: 130 LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLT 189

Query: 97  AQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           AQ+A E+ VV ++ P  KL+E   ++A  + +   L +   + A+ 
Sbjct: 190 AQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALT 235

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272

 Score =  162 bits (413), Expect = 5e-51
 Identities = 25/107 (23%), Positives = 46/107 (42%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  +A++ DI  A   AK       +G   G           G + A    LT    
Sbjct: 119 VGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETL 178

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           + +EA+ +G+VS     +++L    +LAE + + +   +   K ++N
Sbjct: 179 SGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIRWTKRSLN 225

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254

 Score =  161 bits (410), Expect = 9e-51
 Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 3/107 (2%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            G G +L   C   Y   +A F  P +  G + G   T+R     G   A+ I  +   F
Sbjct: 110 FGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVLG---TRRFRDIVGADQALSILGSARAF 166

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A EA+ +G V       +        AE      P     +   + 
Sbjct: 167 DADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRATLHRVLR 213

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264

 Score =  161 bits (410), Expect = 1e-50
 Identities = 26/107 (24%), Positives = 47/107 (43%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  LA+  DI   G+  +     + +G   G           G + A    L     
Sbjct: 116 VGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPL 175

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           T +EA+ +G+V+     EK+ E+ +++AER+ +     +   K A+N
Sbjct: 176 TGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALHHTKHALN 222

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  160 bits (407), Expect = 3e-50
 Identities = 34/107 (31%), Positives = 53/107 (49%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            G G  LA+ CD     EKA F    I +G +P AG    L R  G++ A+E+ + G + 
Sbjct: 106 AGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKV 165

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           TA+EA  +G+ +K+ P     EE  + AER+       +  +K  + 
Sbjct: 166 TAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIGLIKRLLR 212

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266

 Score =  158 bits (402), Expect = 2e-49
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G  + +  D+++A   A F  P + +G  P  G +Q L + AG   A E+  T  +F
Sbjct: 111 IGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKF 170

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI---DDTEGLNH 151
            A+ A + G+V++I             A+ +       + Q K  +        E ++H
Sbjct: 171 NAETALQAGLVNEIVED--AYATAQATAQHLTALPLASLKQTKALMKHDLDQIIECIDH 227

>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263

 Score =  157 bits (400), Expect = 4e-49
 Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            GGG  + + CD   A  +AKF +    +G  P  G +  L R  G    M + L G  F
Sbjct: 113 YGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLF 172

Query: 96  TAQEAKEMGVVSKIFP-PEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           T++EA  +G++ +I    ++L E      + + E     +   K+ + 
Sbjct: 173 TSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIAATKKLLK 220

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334

 Score =  157 bits (399), Expect = 3e-48
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)

Query: 36  LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQ 94
            GGG  L ++CD+  A  E A+F Q +  +G+  G  G+  L R  G+  A EI   G  
Sbjct: 179 AGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRT 238

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT 146
           +TA++  +MG V+ +    +L    ++ A  I   SP     +K A N+ D 
Sbjct: 239 YTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDD 290

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268

 Score =  155 bits (394), Expect = 3e-48
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
            GGG  LA  CDI  A   A+F   E+ +G +P A  +  + RA G+  A  + ++   F
Sbjct: 111 FGGGAGLAAACDIAIASTSARFCFSEVKLGLIP-AVISPYVVRAIGERAAKMLFMSAEVF 169

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A  A  + +V    P + LLE T+K A +I  ++P  V   K+   
Sbjct: 170 DATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVKNSKQLAQ 216

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263

 Score =  152 bits (385), Expect = 7e-47
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
              G +L   CD+ YA   A+F  P +  G          ++R  G+    E+ LTG  +
Sbjct: 116 TAAGLQLMAACDLAYASPAARFCLPGVQNGGFCTTPAV-AVSRVIGRRAVTEMALTGATY 174

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A  A   G++++I P   L      LA  +   +   + +  E +N
Sbjct: 175 DADWALAAGLINRILPEAALATHVADLAGALAARNQAPLRRGLETLN 221

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298

 Score =  152 bits (386), Expect = 1e-46
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G G   A+MCD+ +A   AKF       G +   G +  L R    + A+++ L+G  F
Sbjct: 142 VGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTF 201

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH-SPLIVTQVKEAVN 142
            A+EA ++G+V ++  PE+L+   ++ AE I  + SP  +  +K  V 
Sbjct: 202 LAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKRQVY 249

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255

 Score =  149 bits (379), Expect = 4e-46
 Identities = 25/107 (23%), Positives = 45/107 (42%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G GC LA+ CD++ A   + F      +G MP  G +  L    G++    + +T  + 
Sbjct: 104 VGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKI 163

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +A  A E G++S I   ++       +   +     L     K A+ 
Sbjct: 164 SAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFGWTKRALA 210

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280

 Score =  143 bits (362), Expect = 3e-43
 Identities = 27/114 (23%), Positives = 49/114 (42%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           +G    L  + D +YA ++A F  P   +G  P    +    +    + A E+ + G + 
Sbjct: 133 VGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKL 192

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
           TA EA   G+V+++FP     +E     +   +  P  +   KE +   + E L
Sbjct: 193 TAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKL 246

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279

 Score =  139 bits (352), Expect = 1e-41
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 1/108 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPG-AGGTQRLTRAAGKSNAMEICLTGNQ 94
            G G  LA+  D   A    +F      +G   G  G    L R  G  +A  + + G+ 
Sbjct: 125 AGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDT 184

Query: 95  FTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
             A EA+ +G++S++    +  E    LA R+ +   L   Q K  + 
Sbjct: 185 VRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHAQTKALLT 232

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333

 Score =  140 bits (355), Expect = 1e-41
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG ++A+  D + A   AK G P + +  +P AG         G   A  +  TG+  
Sbjct: 169 VAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCI 225

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           T  +A E G+  +   P  L   T +L ERI       +   K A N
Sbjct: 226 TGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLIMAKLACN 272

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score =  143 bits (362), Expect = 3e-41
 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 5/112 (4%)

Query: 36  LGGGCELAMMCDIIYA--GEKAKFGQPEI-IIGTMPGAGGTQRLT--RAAGKSNAMEICL 90
            GGG ELA+ CD IY      +    PE+ ++G +PG GG  R+T  R      A   C 
Sbjct: 141 AGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCT 200

Query: 91  TGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
                  + AK   +V ++  P +  +     A  +   S          + 
Sbjct: 201 VVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHAQGVPLT 252

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score = 59.6 bits (144), Expect = 2e-11
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 10/128 (7%)

Query: 35  YLGGGCELAMMCDIIY-------AGEKAKFGQPEIIIGTMPGAGGTQRL-TRAAGKSNAM 86
           + G   ELA   D  Y         E+      E+  G  P      RL  R   ++  +
Sbjct: 388 FAGTFAELAFAADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPL 447

Query: 87  E--ICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID 144
           +      G      EA+ +G+V+         +E     E     SP  +T ++  +  +
Sbjct: 448 DAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDALTGLEANLRFN 507

Query: 145 DTEGLNHR 152
             E +  R
Sbjct: 508 GPETMETR 515

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280

 Score =  134 bits (338), Expect = 1e-39
 Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)

Query: 26  FIQCLKIWIY------LGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTR 78
           FI+  K+ I       +G    L  +CDI+Y+  +K     P   +G +   G T  L  
Sbjct: 108 FIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPL 167

Query: 79  AAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETI------KLAERIGEHSPL 132
             G +   E  +    F      E G +SK F       E        +L E++      
Sbjct: 168 KFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLP 227

Query: 133 IVTQVKEAVNIDDTEGLNH 151
               +K+ +  +  +  N 
Sbjct: 228 SCLGMKKLLKSNHIDAFNK 246

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267

 Score =  131 bits (331), Expect = 9e-39
 Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             GG       DI  A + A F   E++ G  P A     L R  G+  A  + L     
Sbjct: 112 NAGGLGFVSATDIAIADQTASFSLSELLFGLYP-ACVLPFLIRRIGRQKAHYMTLMTKPI 170

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           + QEA E G++        +L    K   R+   +   +   K+ ++
Sbjct: 171 SVQEASEWGLIDAFDAESDVLLR--KHLLRLRRLNKKGIAHYKQFMS 215

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267

 Score =  118 bits (299), Expect = 6e-34
 Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 3/107 (2%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
             GG  L   CDI  AG ++ F   E  IG  P       L        A    LTG +F
Sbjct: 120 RAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLL-PKLSARAAARYYLTGEKF 178

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            A+ A+E+G+++     E L     +L   +G  SP  +   K    
Sbjct: 179 DARRAEEIGLITM--AAEDLDAAIDQLVTDVGRGSPQGLAASKALTT 223

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725

 Score =  113 bits (286), Expect = 3e-30
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELAM C    +   A+ G PE+ +G +PG GGTQRL R  G + A+E+ LT    
Sbjct: 114 LGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPV 173

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
            A+E   +G++  + PP +L+    + A  I  
Sbjct: 174 KAEEGHSLGLIDAVVPPAELVTTARRWALDIVG 206

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715

 Score =  111 bits (281), Expect = 1e-29
 Identities = 32/91 (35%), Positives = 48/91 (52%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG E+ +  D     + AK G PE+ +G  PG GGT RL R  G  NA+E   +G + 
Sbjct: 115 LGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKEN 174

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERI 126
            A++A ++  V  +   +KL    + L +R 
Sbjct: 175 RAEDALKVSAVDAVVTADKLGAAALDLIKRA 205

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742

 Score =  110 bits (277), Expect = 4e-29
 Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGG ELA+ C    A  KA+ G PE+ +G +PGA GTQ L R  G   A+++  +G   
Sbjct: 118 LGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYL 177

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGE 128
           +A EA  +G++  +   +  +EE IK A++I +
Sbjct: 178 SADEALRLGILDAVVKSD-PVEEAIKFAQKIID 209

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 1/108 (0%)

Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I +GGG  L          E ++   PE+ IG  P  GG+  L R  GK   + + LT  
Sbjct: 152 IVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKM-GLFLGLTAY 210

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV 141
              A +A  +G+       +        +A      SP +  Q  + +
Sbjct: 211 HMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTM 258

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 5/109 (4%)

Query: 34  IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN 93
           I +GGG  L++      A EK  F  PE  IG  P  GG   L R  GK     + LTG 
Sbjct: 112 ITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL-GYFLALTGF 170

Query: 94  QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +   ++    G+ +     EKL      L E +          +   + 
Sbjct: 171 RLKGRDVYRAGIATHFVDSEKLAM----LEEDLLALKSPSKENIASVLE 215

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	100.0
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	100.0
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	100.0
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	100.0
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	100.0
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	100.0
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	100.0
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	100.0
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	100.0
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	100.0
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	100.0
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	100.0
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	100.0
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	100.0
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	100.0
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	100.0
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	100.0
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	100.0
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	100.0
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	100.0
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	100.0
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	100.0
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	100.0
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	100.0
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	100.0
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	100.0
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	100.0
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	100.0
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	100.0
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	100.0
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	100.0
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	100.0
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	100.0
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	100.0
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	100.0
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	100.0
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	100.0
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	100.0
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	99.98
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	99.98
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	99.98
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	99.98
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	99.98
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	99.98
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	99.98
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	99.98
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	99.98
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	99.98
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	99.98
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	99.98
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	99.98
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	99.97
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	99.97
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	99.97
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	99.97
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	99.97
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	99.97
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	99.97
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	99.97
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	99.97
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	99.97
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	99.97
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	99.97
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	99.97
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	99.97
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	99.97
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	99.97
3t3w_A	279	Enoyl-COA hydratase; ssgcid, structural genomics,	99.97
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	99.96
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	99.96
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	99.95
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	99.95
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	99.94
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	99.94
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	99.94
3viv_A	230	441AA long hypothetical NFED protein; protein-pept	99.31
3rst_A	240	Signal peptide peptidase SPPA; alpha/beta protein	99.31
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	99.27
1y7o_A	218	ATP-dependent CLP protease proteolytic subunit; hy	99.1
2f9y_A	339	Acetyl-COA carboxylase, carboxyltransferase alpha;	98.97
2f9i_A	327	Acetyl-coenzyme A carboxylase carboxyl transferase	98.95
2f9y_B	304	Acetyl-coenzyme A carboxylase carboxyl transferas	98.75
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	98.31
2cby_A	208	ATP-dependent CLP protease proteolytic subunit 1;	97.97
3qwd_A	203	ATP-dependent CLP protease proteolytic subunit; ca	97.45
2f6i_A	215	ATP-dependent CLP protease, putative; structural g	97.31
1yg6_A	193	ATP-dependent CLP protease proteolytic subunit; en	97.24
1tg6_A	277	Putative ATP-dependent CLP protease proteolytic S;	97.22
3p2l_A	201	ATP-dependent CLP protease proteolytic subunit; st	97.21
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	97.19
4gm2_A	205	ATP-dependent CLP protease proteolytic subunit; st	96.95
3iav_A	530	Propionyl-COA carboxylase complex B subunit; accas	95.81
2f9i_B	285	Acetyl-coenzyme A carboxylase carboxyl transferase	95.78
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	95.72
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	95.17
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	94.29
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	93.37
3u9r_B	555	MCC beta, methylcrotonyl-COA carboxylase, beta-sub	93.21
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	92.74
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	91.09
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	90.69
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	89.48
3k8x_A	758	Acetyl-COA carboxylase; transferase, carboxyltrans	88.6
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	85.57
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	84.91
2x24_A	793	Acetyl-COA carboxylase; fatty acid biosynthesis, l	83.43
3gf3_A	588	Glutaconyl-COA decarboxylase subunit A; sodium ION	80.28

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=100.00  E-value=6.7e-35  Score=224.48  Aligned_cols=142  Identities=26%  Similarity=0.338  Sum_probs=128.5

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh---------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC---------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~---------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      .|+||    +|.||+++........         +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        54 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~  129 (254)
T 3hrx_A           54 GRAFS----AGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFV  129 (254)
T ss_dssp             TTCSB----CCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGG
T ss_pred             CCCcc----cCccHHHhcccchhhHHHHHHHHHHHHHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhh
Confidence            47899    9999999855332211         1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+.|++++|++++|+++|++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++
T Consensus       130 ~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~  209 (254)
T 3hrx_A          130 RIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYALTKKLLL  209 (254)
T ss_dssp             GGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred             CcCcCCcccHHHHHHHHhCcchHHHHhhcCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCC
Q psy9281         143 IDDTEGLN  150 (152)
Q Consensus       143 ~~~~~~l~  150 (152)
                      +....+++
T Consensus       210 ~~~~~~~~  217 (254)
T 3hrx_A          210 ETYRLSLT  217 (254)
T ss_dssp             HGGGSCHH
T ss_pred             HHHcCCHH
Confidence            88776654

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=6.3e-35  Score=225.23  Aligned_cols=142  Identities=42%  Similarity=0.729  Sum_probs=128.2

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++........        ...+             +|+|||++|+++||+||++++++|++||++
T Consensus        59 g~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~  134 (258)
T 4fzw_A           59 ARFFA----AGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEIT  134 (258)
T ss_dssp             SSEEE----ECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGG
T ss_pred             CCcee----CCCchhhhccchhhhHHHhHHHHHHHHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccC
Confidence            47899    9999998865432211        1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+++
T Consensus       135 ~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~  214 (258)
T 4fzw_A          135 LGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQ  214 (258)
T ss_dssp             GTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred             CCcCCCchHHHHHHHHhCHHHHHHHHHcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC
Q psy9281         144 DDTEGLN  150 (152)
Q Consensus       144 ~~~~~l~  150 (152)
                      ....+++
T Consensus       215 ~~~~~l~  221 (258)
T 4fzw_A          215 SQEVALQ  221 (258)
T ss_dssp             HTTSCHH
T ss_pred             hhcCCHH
Confidence            7766543

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=100.00  E-value=2.6e-34  Score=222.57  Aligned_cols=142  Identities=39%  Similarity=0.589  Sum_probs=128.0

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +|+||    +|+||+++........          +..+             +|+|||++|+++||+||++++++|++||
T Consensus        64 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe  139 (265)
T 3kqf_A           64 EKAFC----AGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTE  139 (265)
T ss_dssp             SSEEE----CCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred             CCeee----eCcChHHHhccCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcc
Confidence            48999    9999999865322111          1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       140 ~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l  219 (265)
T 3kqf_A          140 TTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAI  219 (265)
T ss_dssp             GGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             cccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCC
Q psy9281         142 NIDDTEGLN  150 (152)
Q Consensus       142 ~~~~~~~l~  150 (152)
                      +.....+++
T Consensus       220 ~~~~~~~l~  228 (265)
T 3kqf_A          220 SNGIQVDLH  228 (265)
T ss_dssp             HHHTTSCHH
T ss_pred             HHhhcCCHH
Confidence            987665543

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=2.6e-34  Score=223.57  Aligned_cols=117  Identities=32%  Similarity=0.514  Sum_probs=113.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+.+|++++++|++++++||+++||||+++|++
T Consensus       121 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~  200 (274)
T 4fzw_C          121 VAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDE  200 (274)
T ss_dssp             CEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGG
T ss_pred             ceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCceEEeChH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....+++
T Consensus       201 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~  237 (274)
T 4fzw_C          201 TLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLD  237 (274)
T ss_dssp             GHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTSSCHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhCCHH
Confidence            9999999999999999999999999999987766654

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=100.00  E-value=4.3e-34  Score=220.89  Aligned_cols=140  Identities=34%  Similarity=0.561  Sum_probs=126.3

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh-----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC-----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~-----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      |+||    +|+||+++........           +..+             +|+|||++|+++||+||++++++|++||
T Consensus        60 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe  135 (261)
T 3pea_A           60 RFFS----AGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPE  135 (261)
T ss_dssp             TCSB----CCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred             Ccee----CCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcc
Confidence            7899    9999999865432111           1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       136 ~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  215 (261)
T 3pea_A          136 LTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLELL  215 (261)
T ss_dssp             GGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             cccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       216 ~~~~~~~l  223 (261)
T 3pea_A          216 QTTKSSHY  223 (261)
T ss_dssp             GGGCCHHH
T ss_pred             HHhhcCCH
Confidence            98765443

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4e-34  Score=222.59  Aligned_cols=140  Identities=24%  Similarity=0.351  Sum_probs=126.3

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      |+||    +|+||+++........          +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        69 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~  144 (275)
T 3hin_A           69 DHFS----AGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEG  144 (275)
T ss_dssp             SCSB----CCBCGGGCCCCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGG
T ss_pred             CCcc----CCCCHHHHhccChhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchh
Confidence            6899    9999999865322111          1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+.|++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++
T Consensus       145 ~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~  224 (275)
T 3hin_A          145 SRGIFVGGGGSVRLPRLIGVARMADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQALP  224 (275)
T ss_dssp             GGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHHHHHHTHHH
T ss_pred             ccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCC
Q psy9281         143 IDDTEGL  149 (152)
Q Consensus       143 ~~~~~~l  149 (152)
                      +....++
T Consensus       225 ~~~~~~~  231 (275)
T 3hin_A          225 MIAEANP  231 (275)
T ss_dssp             HHHHSCH
T ss_pred             HhhcCCH
Confidence            8765554

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=4.7e-34  Score=220.02  Aligned_cols=141  Identities=23%  Similarity=0.291  Sum_probs=120.9

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh-----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC-----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~-----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      |+||    +|.||+++........           +..+             +|+|||++|+++||+||++++++|++||
T Consensus        61 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  136 (256)
T 3qmj_A           61 RGFS----AGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPF  136 (256)
T ss_dssp             TEEE----CCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCG
T ss_pred             CCcc----cCcCHHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcc
Confidence            7899    9999999865322111           1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       137 ~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  216 (256)
T 3qmj_A          137 TSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLMAVKHTM  216 (256)
T ss_dssp             GGC---CCTTHHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             cccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCC
Q psy9281         142 NIDDTEGLN  150 (152)
Q Consensus       142 ~~~~~~~l~  150 (152)
                      +.....+++
T Consensus       217 ~~~~~~~l~  225 (256)
T 3qmj_A          217 VEPNRAQIA  225 (256)
T ss_dssp             HCC------
T ss_pred             HhhhcCCHH
Confidence            987666554

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=100.00  E-value=5.8e-34  Score=220.32  Aligned_cols=141  Identities=26%  Similarity=0.267  Sum_probs=127.2

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh--------hh---hh----------hhchHHHHHHHHcCeeEecCCeEEecccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC--------LK---IW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEIII   64 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~--------~~---~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~   64 (152)
                      |+||    +|+||+++........        ..   .+          +|+|||++|+++||+||++++++|++||+++
T Consensus        66 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~  141 (262)
T 3r9q_A           66 GTFC----AGADLKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRW  141 (262)
T ss_dssp             TCSB----CCBCTTTTTSTTSCCCCTTSSCTTSSTTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHH
T ss_pred             CCcc----CCcCHHHHhccChhhHHHhhhhHHHHHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhcc
Confidence            6899    9999999865322110        01   11          9999999999999999999999999999999


Q ss_pred             cccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281          65 GTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus        65 G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      |++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++|+..||.+++.+|+.++..
T Consensus       142 Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~  221 (262)
T 3r9q_A          142 GVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQ  221 (262)
T ss_dssp             TCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHT
T ss_pred             CCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCC
Q psy9281         145 DTEGLN  150 (152)
Q Consensus       145 ~~~~l~  150 (152)
                      ...+++
T Consensus       222 ~~~~l~  227 (262)
T 3r9q_A          222 WGMAEE  227 (262)
T ss_dssp             TTSCHH
T ss_pred             hcCCHH
Confidence            766553

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*

Probab=100.00  E-value=3.3e-34  Score=218.23  Aligned_cols=141  Identities=15%  Similarity=0.066  Sum_probs=124.8

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      .|+||    +|.||+++........          +..+             +|+|+|++|+++||+||++++++|++||
T Consensus        57 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  132 (233)
T 3r6h_A           57 HRVFS----GGFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANE  132 (233)
T ss_dssp             SSEEE----CCSCHHHHC---CHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCG
T ss_pred             CCCcc----CCcChHHHhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECch
Confidence            37899    9999999865421111          1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       133 ~~~Gl~~~~~g~~~l~~~~g~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  212 (233)
T 3r6h_A          133 VAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHNATKLRA  212 (233)
T ss_dssp             GGGTCCCCHHHHHHHHHHSCHHHHHHHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHT
T ss_pred             hhhCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      ++....++
T Consensus       213 ~~~~~~~l  220 (233)
T 3r6h_A          213 RAEALKAI  220 (233)
T ss_dssp             THHHHHHH
T ss_pred             HHHHHhHH
Confidence            87665443

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=100.00  E-value=2.3e-33  Score=217.61  Aligned_cols=116  Identities=28%  Similarity=0.462  Sum_probs=111.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++ +|++++|..++++++++|++++++||+++||||+++|++
T Consensus       109 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~  187 (268)
T 3i47_A          109 AAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQHCVPDD  187 (268)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGG
T ss_pred             EEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHHHHHHHHHcCCccCHHHHHHcCCCcEeeChh
Confidence            9999999999999999999999999999999999999887 699999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.+++++|+..||.+++.+|+.++.....+++
T Consensus       188 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~  224 (268)
T 3i47_A          188 TLLEFTLKYASQISNNAPEAVKNSKQLAQYVANKKID  224 (268)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCS
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCChh
Confidence            9999999999999999999999999999987766654

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=100.00  E-value=1.2e-33  Score=220.08  Aligned_cols=142  Identities=29%  Similarity=0.491  Sum_probs=127.9

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      .|+||    +|+||+++........          +..+             +|+|||++|+++||+||++++++|++||
T Consensus        77 g~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe  152 (277)
T 4di1_A           77 HEIFS----AGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATE  152 (277)
T ss_dssp             SSCSB----CCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGG
T ss_pred             CCCEe----cCcCcccccccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcc
Confidence            47899    9999999865422111          1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       153 ~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  232 (277)
T 4di1_A          153 ILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVI  232 (277)
T ss_dssp             GGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHHHHHHHHH
T ss_pred             cccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCC
Q psy9281         142 NIDDTEGLN  150 (152)
Q Consensus       142 ~~~~~~~l~  150 (152)
                      +.....+++
T Consensus       233 ~~~~~~~l~  241 (277)
T 4di1_A          233 NDVFELEAT  241 (277)
T ss_dssp             HHTTTSCHH
T ss_pred             HhhhcCCHH
Confidence            987766543

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.1e-33  Score=218.27  Aligned_cols=141  Identities=29%  Similarity=0.397  Sum_probs=125.2

Q ss_pred             ccccCCCCCCcchhhhhhhchhh----------h---h-hhh----------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ----------C---L-KIW----------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~----------~---~-~~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +.||    +|+||+++.......          .   + ..+          +|+|||++|+++||+||++++++|++||
T Consensus        67 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  142 (258)
T 3lao_A           67 EHFT----AGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLE  142 (258)
T ss_dssp             SCSB----CCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGG
T ss_pred             CCee----cCcCHHHHhhccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcc
Confidence            5699    999999986532211          0   2 222          9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       143 ~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  222 (258)
T 3lao_A          143 VLRGIPPLGGSTVRFPRAAGWTDAMRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVRAALQSA  222 (258)
T ss_dssp             GGTCCCSSCCCCSHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             cccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCC
Q psy9281         142 NIDDTEGLN  150 (152)
Q Consensus       142 ~~~~~~~l~  150 (152)
                      +.....+++
T Consensus       223 ~~~~~~~~~  231 (258)
T 3lao_A          223 FQGRDEGDD  231 (258)
T ss_dssp             HHHTC----
T ss_pred             HHhhcCCHH
Confidence            987666554

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=100.00  E-value=2.1e-33  Score=218.84  Aligned_cols=142  Identities=44%  Similarity=0.702  Sum_probs=127.9

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++......+.        +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        79 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~  154 (278)
T 3h81_A           79 AKAFA----AGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIK  154 (278)
T ss_dssp             SSEEE----CCBCSHHHHTCCHHHHHHHTTTGGGHHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGG
T ss_pred             CCCee----cCcCHHHHhccChhhHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhh
Confidence            47899    9999999865322111        1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       155 lGl~p~~g~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~  234 (278)
T 3h81_A          155 LGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNR  234 (278)
T ss_dssp             GTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             cCcCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC
Q psy9281         144 DDTEGLN  150 (152)
Q Consensus       144 ~~~~~l~  150 (152)
                      ....+++
T Consensus       235 ~~~~~l~  241 (278)
T 3h81_A          235 AFESSLS  241 (278)
T ss_dssp             TTTSCHH
T ss_pred             hhcCCHH
Confidence            7765543

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=100.00  E-value=9.6e-34  Score=219.18  Aligned_cols=142  Identities=46%  Similarity=0.757  Sum_probs=127.8

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++......+.        +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        64 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  139 (263)
T 3moy_A           64 ERAFA----AGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEIT  139 (263)
T ss_dssp             SSEEE----ESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGG
T ss_pred             CCCee----CCcChHHHhccCchhHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccc
Confidence            47899    9999999865322211        1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       140 ~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  219 (263)
T 3moy_A          140 LGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAINE  219 (263)
T ss_dssp             GTCCCSSSTTTHHHHHHCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred             cCCCCchhHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCC
Q psy9281         144 DDTEGLN  150 (152)
Q Consensus       144 ~~~~~l~  150 (152)
                      ....+++
T Consensus       220 ~~~~~l~  226 (263)
T 3moy_A          220 AFERPLS  226 (263)
T ss_dssp             TTTSCHH
T ss_pred             hhcCCHH
Confidence            7766543

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=100.00  E-value=1.8e-33  Score=216.80  Aligned_cols=141  Identities=21%  Similarity=0.327  Sum_probs=123.5

Q ss_pred             ccccCCCCCCcchhhhhhhchhh----hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccccccccC
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ----CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMP   68 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~----~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p   68 (152)
                      |+||    +|.||+++.+.....    .+..+             +|+|||++|+++||+||++++++|++||+++|++|
T Consensus        61 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p  136 (255)
T 3p5m_A           61 RAFC----SGGDLTGGDTAGAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMP  136 (255)
T ss_dssp             SCSB----CEECC---CHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCC
T ss_pred             CCcc----CCCChhhhcchHHHHHHHHHHHHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCC
Confidence            7899    999999875311011    11111             99999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281          69 GAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus        69 ~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      +.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.....+
T Consensus       137 ~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~  216 (255)
T 3p5m_A          137 DGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFGWTKRALAAATLAE  216 (255)
T ss_dssp             CTTHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHCTT
T ss_pred             CccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999876655


Q ss_pred             CC
Q psy9281         149 LN  150 (152)
Q Consensus       149 l~  150 (152)
                      ++
T Consensus       217 l~  218 (255)
T 3p5m_A          217 LE  218 (255)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=100.00  E-value=3.1e-33  Score=217.88  Aligned_cols=141  Identities=21%  Similarity=0.268  Sum_probs=126.7

Q ss_pred             ccccCCCCCCcchhhhhhhchhh--------------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEe
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ--------------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFG   58 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~--------------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~   58 (152)
                      |+||    +|+||+++.......              .+..+             +|+|||++|+++||+||++++++|+
T Consensus        72 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~  147 (279)
T 3g64_A           72 RGFC----SGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFA  147 (279)
T ss_dssp             SCSB----CCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEE
T ss_pred             Ccee----cCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEe
Confidence            6899    999999886533210              01111             9999999999999999999999999


Q ss_pred             ccccccccc-CCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHH
Q psy9281          59 QPEIIIGTM-PGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus        59 ~pe~~~G~~-p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                      +||+++|++ |+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++|+..||.+++.+
T Consensus       148 ~pe~~~Gl~~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~  227 (279)
T 3g64_A          148 FLFTRVGLSGGDMGAAYLLPRVVGLGHATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHAQT  227 (279)
T ss_dssp             CCGGGGTCCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred             CchhhcCCCCCchhHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            999999999 9999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCCC
Q psy9281         138 KEAVNIDDTEGLN  150 (152)
Q Consensus       138 K~~l~~~~~~~l~  150 (152)
                      |+.++.....+++
T Consensus       228 K~~l~~~~~~~l~  240 (279)
T 3g64_A          228 KALLTAELDMPLA  240 (279)
T ss_dssp             HHHHHHHTTSCHH
T ss_pred             HHHHHhhhcCCHH
Confidence            9999987665543

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}

Probab=100.00  E-value=1e-33  Score=215.43  Aligned_cols=141  Identities=16%  Similarity=0.106  Sum_probs=125.1

Q ss_pred             cccccCCCCCCcchhhhhhhchhh--h-------hhhh-------------hhchHHHHHHHHcCeeEecCC-eEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ--C-------LKIW-------------IYLGGGCELAMMCDIIYAGEK-AKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~--~-------~~~~-------------~a~G~G~~lal~cD~ria~~~-a~f~~pe   61 (152)
                      .|+||    +|.||+++.......  .       +..+             +|+|||++|+++||+||++++ ++|++||
T Consensus        57 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe  132 (232)
T 3ot6_A           57 PGILS----GGYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNE  132 (232)
T ss_dssp             TEEEE----CCBCHHHHHHCHHHHHHHHHHHHHHHHHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCT
T ss_pred             CCCcc----CCcCHHHHhhChHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcc
Confidence            37899    999999986532111  0       1111             999999999999999999998 8999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.++++++++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       133 ~~~Gl~p~~~g~~~l~~~ig~~~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  212 (232)
T 3ot6_A          133 VQIGMTMHHAGIELARDRLRKSAFNRSVINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKV  212 (232)
T ss_dssp             TTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             cccCCCCchhHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999988888888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       213 ~~~~~~~l  220 (232)
T 3ot6_A          213 RKGLLDTL  220 (232)
T ss_dssp             HHHHHHHH
T ss_pred             HHHhHhHH
Confidence            98765544

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=100.00  E-value=3.1e-33  Score=215.55  Aligned_cols=141  Identities=31%  Similarity=0.477  Sum_probs=126.8

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh-----hh--hh----------hhchHHHHHHHHcCeeEecCCeEEecccccccccC
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC-----LK--IW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMP   68 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~-----~~--~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p   68 (152)
                      |+||    +|.||+++........     +.  .+          +|+|||++|+++||+||++++++|++||+++|++|
T Consensus        62 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p  137 (256)
T 3trr_A           62 GNFC----AGMDLKAFVSGEAVLSERGLGFTNVPPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVA  137 (256)
T ss_dssp             GCCC----CCBCHHHHHHTCCCEETTEETTSSSCCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCC
T ss_pred             Ccee----cCcCHHHhccccchhhhhhhhHHHhcCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCC
Confidence            6899    9999998864321110     00  11          99999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281          69 GAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus        69 ~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      +.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.....+
T Consensus       138 ~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~  217 (256)
T 3trr_A          138 GAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATKRIIIESASWA  217 (256)
T ss_dssp             CSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSC
T ss_pred             CccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999877665


Q ss_pred             CC
Q psy9281         149 LN  150 (152)
Q Consensus       149 l~  150 (152)
                      ++
T Consensus       218 l~  219 (256)
T 3trr_A          218 PE  219 (256)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=6.9e-33  Score=214.57  Aligned_cols=142  Identities=31%  Similarity=0.453  Sum_probs=122.7

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh------hhhh------------hhchHHHHHHHHcCeeEecCCeEEeccccccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC------LKIW------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTM   67 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~------~~~~------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~   67 (152)
                      ++||    +|.||+++........      +..+            +|+|||++|+++||+||++++++|++||+++|++
T Consensus        70 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~  145 (265)
T 3qxi_A           70 GSFC----AGMDLKAFARGENVVVEGRGLGFTERPPAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLV  145 (265)
T ss_dssp             TCCC----CSBC-------CCCEETTTEETTTTSCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC
T ss_pred             CCee----CCCChhhhhccchhhhhhhhhhHHHhhCCCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcC
Confidence            6899    9999998754321110      1111            9999999999999999999999999999999999


Q ss_pred             CCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccC
Q psy9281          68 PGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTE  147 (152)
Q Consensus        68 p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~  147 (152)
                      |+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.....
T Consensus       146 p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~  225 (265)
T 3qxi_A          146 AGGGGLLRLPERIPYAIAMELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGW  225 (265)
T ss_dssp             CCSSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTC
T ss_pred             CcccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987776


Q ss_pred             CCCC
Q psy9281         148 GLNH  151 (152)
Q Consensus       148 ~l~~  151 (152)
                      ++++
T Consensus       226 ~l~~  229 (265)
T 3qxi_A          226 SLDT  229 (265)
T ss_dssp             CTTT
T ss_pred             CHHH
Confidence            6653

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=100.00  E-value=4.1e-33  Score=214.89  Aligned_cols=140  Identities=27%  Similarity=0.420  Sum_probs=121.4

Q ss_pred             ccccCCCCCCcchhhhhhhchh---------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI---------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~---------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      |+||    +|+||+++.+....         ..+..+             +|+|||++|+++||+||++++++|++||++
T Consensus        58 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~  133 (257)
T 2ej5_A           58 RAFC----AGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIH  133 (257)
T ss_dssp             SCSB----CCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGG
T ss_pred             CCcc----CCcCHHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccc
Confidence            7899    99999987542210         111111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|++++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       134 ~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  213 (257)
T 2ej5_A          134 VGLVPDAGHLYYLPRLVGRAKALELAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIGLIKRLLRE  213 (257)
T ss_dssp             GTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             cCCCCcchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       214 ~~~~~~  219 (257)
T 2ej5_A          214 SEETTF  219 (257)
T ss_dssp             HHHSCH
T ss_pred             hhcCCH
Confidence            665544

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=100.00  E-value=2.3e-33  Score=217.49  Aligned_cols=141  Identities=30%  Similarity=0.462  Sum_probs=125.8

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----------hhh--hh----------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----------CLK--IW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----------~~~--~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      +|+||    +|+||+++.......          .+.  .+          +|+|||++|+++||+||++++++|++||+
T Consensus        64 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~  139 (267)
T 3r9t_A           64 DKSFC----AGADLKAIARRENLYHPDHPEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEV  139 (267)
T ss_dssp             SSEEE----CCBCHHHHHTTCCCSCTTCGGGCGGGTTTCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGG
T ss_pred             CCcee----CCcChHHHhcccchhhHHHHhHHHHHHHHHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECccc
Confidence            37999    999999885432110          011  11          99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH--
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA--  140 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~--  140 (152)
                      ++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++|+..||.+++.+|+.  
T Consensus       140 ~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~  219 (267)
T 3r9t_A          140 KRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIAY  219 (267)
T ss_dssp             GTTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHT
T ss_pred             ccCCCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             -HhccccCCC
Q psy9281         141 -VNIDDTEGL  149 (152)
Q Consensus       141 -l~~~~~~~l  149 (152)
                       ++.....++
T Consensus       220 ~l~~~~~~~l  229 (267)
T 3r9t_A          220 GVDDGVVVGD  229 (267)
T ss_dssp             TEETTEEGGG
T ss_pred             HHHHhhcCCH
Confidence             877655444

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=100.00  E-value=1.4e-33  Score=218.22  Aligned_cols=115  Identities=25%  Similarity=0.377  Sum_probs=111.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCC-c
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFP-P  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~-~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++| +
T Consensus       111 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~  190 (263)
T 3lke_A          111 YAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGLIQEICENK  190 (263)
T ss_dssp             EEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEESSH
T ss_pred             EeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHcCCCcEecCCh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999 8


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      +++.+++.+++++++..||.+++.+|+.++.....+
T Consensus       191 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~  226 (263)
T 3lke_A          191 QELQERVKNYLKAVSEGYVPAIAATKKLLKGKAAEE  226 (263)
T ss_dssp             HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcC
Confidence            999999999999999999999999999998865543

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=4.9e-33  Score=215.33  Aligned_cols=140  Identities=33%  Similarity=0.389  Sum_probs=125.7

Q ss_pred             ccccCCCCCCcchhhhhhhchhh----------h---h-hhh----------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ----------C---L-KIW----------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~----------~---~-~~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +.||    +|+||+++.......          .   + ..+          +|+|||++|+++||+||++++++|++||
T Consensus        64 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  139 (265)
T 3swx_A           64 PLFT----AGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLE  139 (265)
T ss_dssp             TCSB----CCBCHHHHHHHHC--CCCCCTTCCCTTCCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGG
T ss_pred             CCcc----cCcChHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcc
Confidence            5699    999999986532110          0   2 222          9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       140 ~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l  219 (265)
T 3swx_A          140 VNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQATLRNA  219 (265)
T ss_dssp             GGGTSCCCSSHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             cccccCCCccHHHHHHHHhhHHHHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       220 ~~~~~~~~  227 (265)
T 3swx_A          220 RLAVREGD  227 (265)
T ss_dssp             HHHHHHCH
T ss_pred             HHhhcCCH
Confidence            88665444

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=100.00  E-value=1.8e-33  Score=217.78  Aligned_cols=141  Identities=24%  Similarity=0.349  Sum_probs=127.1

Q ss_pred             ccccCCCCCCcchhhhhhhchhh---------h---hhhh----------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ---------C---LKIW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~---------~---~~~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      |+||    +|.||+++.......         .   +..+          +|+|||++|+++||+||++++++|++||++
T Consensus        62 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  137 (265)
T 3qxz_A           62 PAFC----SGAQISAAAETFAAPRNPDFSASPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVR  137 (265)
T ss_dssp             TEEE----CCBCSTTCTTCCCCCCSSCCCSCCSSSCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGG
T ss_pred             Cccc----cCcChHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccc
Confidence            7899    999999886532111         1   1111          999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcC-CHHHHHHHHHHHh
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEH-SPLIVTQVKEAVN  142 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~-~~~a~~~~K~~l~  142 (152)
                      +|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++.. ||.+++.+|+.++
T Consensus       138 ~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~~~K~~l~  217 (265)
T 3qxz_A          138 FGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAALTKRLLW  217 (265)
T ss_dssp             GTSCCCTTHHHHTHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred             cCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             ccccCCCC
Q psy9281         143 IDDTEGLN  150 (152)
Q Consensus       143 ~~~~~~l~  150 (152)
                      +....+++
T Consensus       218 ~~~~~~l~  225 (265)
T 3qxz_A          218 DAQMTGMS  225 (265)
T ss_dssp             HHHHHTCC
T ss_pred             HhhcCCHH
Confidence            87666554

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=100.00  E-value=3.8e-33  Score=215.48  Aligned_cols=113  Identities=28%  Similarity=0.476  Sum_probs=110.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       111 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  190 (261)
T 2gtr_A          111 PAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPG  190 (261)
T ss_dssp             CEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECGG
T ss_pred             eEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCcccccChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+++.+++++++..||.+++.+|+.++....
T Consensus       191 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~  223 (261)
T 2gtr_A          191 TFTQEVMVRIKELASCNPVVLEESKALVRCNMK  223 (261)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTTH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999987554

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=100.00  E-value=5.5e-33  Score=217.63  Aligned_cols=117  Identities=34%  Similarity=0.439  Sum_probs=112.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCC-ccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPG-AGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~-~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+ .+++++|++++|..++++++++|++++++||+++||||+++|+
T Consensus       133 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~  212 (290)
T 3sll_A          133 AAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRDVDADEAERIGLVSRKVAS  212 (290)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECG
T ss_pred             eehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEEeCh
Confidence            999999999999999999999999999999999999 9999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc-CCCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT-EGLN  150 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~-~~l~  150 (152)
                      +++.+++.+++++|+..||.+++.+|+.++.... .+++
T Consensus       213 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~l~  251 (290)
T 3sll_A          213 ESLLEECYAIGERIAGFSRPGIELTKRTIWSGLDAASLE  251 (290)
T ss_dssp             GGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCSCHH
T ss_pred             hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccCCHH
Confidence            9999999999999999999999999999998766 5543

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=100.00  E-value=3.8e-33  Score=219.30  Aligned_cols=117  Identities=30%  Similarity=0.441  Sum_probs=111.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       140 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~  219 (298)
T 3qre_A          140 PCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPE  219 (298)
T ss_dssp             CEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGG
T ss_pred             ceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC-CHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEH-SPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~-~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.+++++|+.. ||.+++.+|+.++.....+++
T Consensus       220 ~l~~~a~~~A~~la~~~~p~a~~~~K~~l~~~~~~~l~  257 (298)
T 3qre_A          220 QLMPRALEYAEDIARYCSPSSMAVIKRQVYGDATRDVV  257 (298)
T ss_dssp             GHHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGGC---
T ss_pred             HHHHHHHHHHHHHHccCCHHHHHHHHHHHHhhhcCCHH
Confidence            9999999999999998 999999999999987766554

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}

Probab=100.00  E-value=4.3e-33  Score=217.98  Aligned_cols=111  Identities=31%  Similarity=0.536  Sum_probs=108.9

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||+++ +++|++||+++|++|+.|++++|++++|+.+|++++++|++++++||+++||||+++|+
T Consensus       116 ~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~  195 (287)
T 3gkb_A          116 KARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGWINRALPA  195 (287)
T ss_dssp             EEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECH
T ss_pred             eeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEEeCh
Confidence            99999999999999999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      +++.+++.+++++|+..||.+++.+|+.++..
T Consensus       196 ~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~  227 (287)
T 3gkb_A          196 DELDEYVDRVARNIAALPDGVIEAAKRSLPAD  227 (287)
T ss_dssp             HHHHHHHHHHHHHHHTSCTTHHHHHHHHSCCC
T ss_pred             hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Confidence            99999999999999999999999999999864

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=100.00  E-value=2.8e-33  Score=215.84  Aligned_cols=139  Identities=27%  Similarity=0.374  Sum_probs=122.8

Q ss_pred             ccccCCCCCCcchhhhhhhchhh-h---hhhh----------hhchHHHHHHHHcCeeEecCCeEEecccccccccCCcc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ-C---LKIW----------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAG   71 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~-~---~~~~----------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~   71 (152)
                      ++||    +|.||+++....... .   +..+          +|+|||++|+++||+||++++++|++||+++|++|+.+
T Consensus        64 ~~F~----aG~Dl~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g  139 (256)
T 3pe8_A           64 PVFC----AGLDLKELGDTTELPDISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWG  139 (256)
T ss_dssp             TCSB----CCBCTTTC---------CCCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSS
T ss_pred             CCcc----CCcCHHHHhhhHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCccc
Confidence            6899    999999885431111 1   1111          99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281          72 GTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus        72 ~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      ++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.....+
T Consensus       140 ~~~~L~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~  216 (256)
T 3pe8_A          140 LSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRALLDSYHRIDALQ  216 (256)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998765443

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=100.00  E-value=6.5e-33  Score=215.96  Aligned_cols=141  Identities=30%  Similarity=0.374  Sum_probs=117.3

Q ss_pred             ccccCCCCCCcchhhhhhhchhh----------h---hh---hh----------hhchHHHHHHHHcCeeEecCCeEEec
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ----------C---LK---IW----------IYLGGGCELAMMCDIIYAGEKAKFGQ   59 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~----------~---~~---~~----------~a~G~G~~lal~cD~ria~~~a~f~~   59 (152)
                      |+||    +|+||+++.......          .   +.   .+          +|+|||++|+++||+||++++++|++
T Consensus        75 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~  150 (278)
T 4f47_A           75 GYFC----AGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGI  150 (278)
T ss_dssp             TCCC--------------------------CTTCBTTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEEC
T ss_pred             Cccc----CCcChHhhhccchhhhHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEEC
Confidence            6899    999999875432111          0   11   12          99999999999999999999999999


Q ss_pred             ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281          60 PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus        60 pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      ||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+
T Consensus       151 pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~  230 (278)
T 4f47_A          151 SEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQAILR  230 (278)
T ss_dssp             CGGGGTCCCTTSHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             cccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccCCCC
Q psy9281         140 AVNIDDTEGLN  150 (152)
Q Consensus       140 ~l~~~~~~~l~  150 (152)
                      .++.....+++
T Consensus       231 ~l~~~~~~~l~  241 (278)
T 4f47_A          231 TIRETEGMHEN  241 (278)
T ss_dssp             HHHHTTTSCHH
T ss_pred             HHHHhccCCHH
Confidence            99987665543

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=100.00  E-value=7e-33  Score=213.94  Aligned_cols=141  Identities=58%  Similarity=0.877  Sum_probs=126.1

Q ss_pred             cccccCCCCCCcchhhhhhhchhh--------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ--------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~--------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++.......        .+..+             +|+|||++|+++||+||++++++|++||++
T Consensus        61 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~  136 (260)
T 1mj3_A           61 EKAFA----AGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEIL  136 (260)
T ss_dssp             SSEEE----CCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGG
T ss_pred             CCCcc----CCcChHhhhcccchHHHHHHHHHHHHHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccc
Confidence            37899    999999875321110        01111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       137 ~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  216 (260)
T 1mj3_A          137 LGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNA  216 (260)
T ss_dssp             GTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHHG
T ss_pred             cCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       217 ~~~~~~  222 (260)
T 1mj3_A          217 AFEMTL  222 (260)
T ss_dssp             GGSSCH
T ss_pred             hhcCCH
Confidence            766554

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=100.00  E-value=9.9e-33  Score=212.84  Aligned_cols=141  Identities=40%  Similarity=0.656  Sum_probs=126.0

Q ss_pred             cccccCCCCCCcchhhhhhhch--h------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKF--I------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~--~------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .|+||    +|+||+++.....  .      ..+..+             +|+|||++|+++||+||++++++|++||++
T Consensus        59 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~  134 (258)
T 2pbp_A           59 GRAFA----AGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVN  134 (258)
T ss_dssp             TTEEE----CCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGG
T ss_pred             CCCcc----CCcCHHHHhcccchhHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccc
Confidence            37899    9999998754221  0      111111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++.
T Consensus       135 ~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  214 (258)
T 2pbp_A          135 LGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALRLIKEAVQK  214 (258)
T ss_dssp             GTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred             cCCCCcccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cccCCC
Q psy9281         144 DDTEGL  149 (152)
Q Consensus       144 ~~~~~l  149 (152)
                      ....++
T Consensus       215 ~~~~~~  220 (258)
T 2pbp_A          215 AVDYPL  220 (258)
T ss_dssp             HHHSCH
T ss_pred             hhcCCH
Confidence            665544

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=100.00  E-value=6.3e-33  Score=215.08  Aligned_cols=116  Identities=25%  Similarity=0.384  Sum_probs=111.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       110 ~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  189 (269)
T 1nzy_A          110 VAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD  189 (269)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCSCEECHH
T ss_pred             eeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       190 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~  225 (269)
T 1nzy_A          190 EFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPV  225 (269)
T ss_dssp             HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCH
Confidence            999999999999999999999999999987665543

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=100.00  E-value=4.3e-33  Score=216.51  Aligned_cols=116  Identities=29%  Similarity=0.465  Sum_probs=111.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCC--CCCHHHHHHcCCccccCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGN--QFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~--~~~a~ea~~~Glv~~v~~  111 (152)
                      +|+|||++|+++||+||++++++|++||+++|++| .+++++|++++|..++++++++|+  +++++||+++||||+++|
T Consensus       120 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~  198 (274)
T 3tlf_A          120 ICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPRSIALRMALMGKHERMSAQRAYELGLISEIVE  198 (274)
T ss_dssp             EEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCHHHHHHHHHHGGGCCEEHHHHHHHTSSSEEEC
T ss_pred             eeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCHHHHHHHHHcCCCCccCHHHHHHCCCCCeecC
Confidence            99999999999999999999999999999999999 999999999999999999999999  999999999999999999


Q ss_pred             cchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         112 PEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       112 ~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++++.+++.+++++++..||.+++.+|+.++.....+++
T Consensus       199 ~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~  237 (274)
T 3tlf_A          199 HDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLH  237 (274)
T ss_dssp             GGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHH
Confidence            999999999999999999999999999999987666543

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=100.00  E-value=9.9e-33  Score=214.79  Aligned_cols=116  Identities=28%  Similarity=0.468  Sum_probs=111.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       116 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~  195 (276)
T 2j5i_A          116 WCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLA  195 (276)
T ss_dssp             CEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEECHH
T ss_pred             eeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       196 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~  231 (276)
T 2j5i_A          196 QLREVTIELARNLLEKNPVVLRAAKHGFKRCRELTW  231 (276)
T ss_dssp             HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence            999999999999999999999999999987665443

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.4e-32  Score=212.75  Aligned_cols=141  Identities=33%  Similarity=0.571  Sum_probs=125.9

Q ss_pred             cccccCCCCCCcchhhhhhhch----------hhhhhhh-------------hhchHHHHHHHHcCeeEecCCe-EEecc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKF----------IQCLKIW-------------IYLGGGCELAMMCDIIYAGEKA-KFGQP   60 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~----------~~~~~~~-------------~a~G~G~~lal~cD~ria~~~a-~f~~p   60 (152)
                      .|+||    +|+||+++.....          ...+..+             +|+|||++|+++||+||+++++ +|++|
T Consensus        63 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~p  138 (265)
T 2ppy_A           63 PKFFS----AGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLP  138 (265)
T ss_dssp             TTEEE----CCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECC
T ss_pred             CCeee----eCcCHHHHhccchhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECc
Confidence            47899    9999998754110          1111111             9999999999999999999999 99999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.
T Consensus       139 e~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~  218 (265)
T 2ppy_A          139 EVSLGVLAGTGGTQRLARLIGYSRALDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVSNIKLA  218 (265)
T ss_dssp             GGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ccccCCCCCchHHHHHHHHhCHHHHHHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccccCCC
Q psy9281         141 VNIDDTEGL  149 (152)
Q Consensus       141 l~~~~~~~l  149 (152)
                      ++.....++
T Consensus       219 l~~~~~~~~  227 (265)
T 2ppy_A          219 IMNGKEMPL  227 (265)
T ss_dssp             HHHHTTSCH
T ss_pred             HHHhhcCCH
Confidence            988665544

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=100.00  E-value=6.8e-33  Score=217.05  Aligned_cols=113  Identities=35%  Similarity=0.514  Sum_probs=110.5

Q ss_pred             hhchHHHHHHHHcCeeEecCC-eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++ ++|++||+++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|+
T Consensus       113 ~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~  192 (289)
T 3h0u_A          113 RARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAERYGWVNRAVPD  192 (289)
T ss_dssp             EEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECH
T ss_pred             EeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCH
Confidence            999999999999999999998 9999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      +++.+++.+++++|+..||.+++.+|+.++....
T Consensus       193 ~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~~~  226 (289)
T 3h0u_A          193 AELDEFVAGIAARMSGFPRDALIAAKSAINAISL  226 (289)
T ss_dssp             HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999988655

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A

Probab=100.00  E-value=7.2e-33  Score=213.89  Aligned_cols=139  Identities=17%  Similarity=0.190  Sum_probs=124.1

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----------hhhhh-------------hhchHHHHHHHHcCeeEec--CCeEEec
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----------CLKIW-------------IYLGGGCELAMMCDIIYAG--EKAKFGQ   59 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----------~~~~~-------------~a~G~G~~lal~cD~ria~--~~a~f~~   59 (152)
                      .|+||    +|+||+++.......          .+..+             +|+|||++|+++||+||++  ++++|++
T Consensus        59 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~  134 (260)
T 1sg4_A           59 PGVFS----AGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGL  134 (260)
T ss_dssp             TEESC----CEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSC
T ss_pred             CCceE----cCcCHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeC
Confidence            47899    999999875421110          01111             9999999999999999999  8999999


Q ss_pred             ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281          60 PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus        60 pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      ||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+
T Consensus       135 pe~~~Gl~p~~g~~~~l~~~vG~~~a~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~  214 (260)
T 1sg4_A          135 NETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKA  214 (260)
T ss_dssp             CGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             chhhhCCCCchhHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccC
Q psy9281         140 AVNIDDTE  147 (152)
Q Consensus       140 ~l~~~~~~  147 (152)
                      .++.....
T Consensus       215 ~l~~~~~~  222 (260)
T 1sg4_A          215 MMRKATAS  222 (260)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhhhc
Confidence            99875443

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A

Probab=100.00  E-value=9e-33  Score=214.63  Aligned_cols=136  Identities=20%  Similarity=0.186  Sum_probs=123.2

Q ss_pred             ccccCCCCCCcchhhhhhhchhh-----h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ-----C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~-----~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      |+||    +|+||+++.......     .       +..+             +|+|||++|+++||+||++++++|++|
T Consensus        68 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~p  143 (272)
T 3qk8_A           68 KAFS----SGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDG  143 (272)
T ss_dssp             SCSB----CEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECC
T ss_pred             CCee----CCcCHHHHhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECc
Confidence            6899    999999885432110     0       1111             999999999999999999999999999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++|+..||.+++.+|+.
T Consensus       144 e~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~  223 (272)
T 3qk8_A          144 HTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIRWTKRS  223 (272)
T ss_dssp             HHHHTSCSCSSHHHHTHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             hhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhccc
Q psy9281         141 VNIDD  145 (152)
Q Consensus       141 l~~~~  145 (152)
                      ++...
T Consensus       224 l~~~~  228 (272)
T 3qk8_A          224 LNHWY  228 (272)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98643

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=99.98  E-value=4.5e-33  Score=218.23  Aligned_cols=113  Identities=26%  Similarity=0.469  Sum_probs=110.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       129 ~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~  208 (291)
T 2fbm_A          129 PAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTG  208 (291)
T ss_dssp             CEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTSCCEEEHHHHHHTTSCSEEECST
T ss_pred             eeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHHHHHHHHHcCCccCHHHHHHCCCcceecChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+++.+++++++..||.+++.+|+.++....
T Consensus       209 ~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~  241 (291)
T 2fbm_A          209 TFTQEVMIQIKELASYNPIVLEECKALVRCNIK  241 (291)
T ss_dssp             TSHHHHHHHHHHHTTSCHHHHHHHHHHHHTTTH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999987544

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=99.98  E-value=5.2e-33  Score=213.44  Aligned_cols=137  Identities=23%  Similarity=0.244  Sum_probs=122.5

Q ss_pred             cccccCCCCCCcchhhhhhhchh----hh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI----QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~----~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      .|+||    +|+||+++.+....    ..       +..+             +|+|||++|+++||+||++++++|++|
T Consensus        55 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~p  130 (250)
T 2a7k_A           55 ERSFS----AGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMP  130 (250)
T ss_dssp             TSCSB----CBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECC
T ss_pred             CCCcc----CCcCHHHHhhcCchhhHHHHHHHHHHHHHHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCc
Confidence            47899    99999987542111    00       1111             999999999999999999999999999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.+++ +|++++|.+++++++++|++++++||+++||||+++|++++.+.+.+++++++..||.+++.+|+.
T Consensus       131 e~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~  209 (250)
T 2a7k_A          131 ELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRA  209 (250)
T ss_dssp             GGGGTCCCHHHHH-HHHHHHCHHHHHHHHHHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ccccCCCCCcHHH-HHHHHhHHHHHHHHHHcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            9999999999999 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhcccc
Q psy9281         141 VNIDDT  146 (152)
Q Consensus       141 l~~~~~  146 (152)
                      ++....
T Consensus       210 l~~~~~  215 (250)
T 2a7k_A          210 VNKPFI  215 (250)
T ss_dssp             HHHHHH
T ss_pred             HHHhhh
Confidence            987544

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=99.98  E-value=1.3e-32  Score=214.46  Aligned_cols=113  Identities=22%  Similarity=0.356  Sum_probs=110.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       131 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~  210 (280)
T 2f6q_A          131 PAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDS  210 (280)
T ss_dssp             CEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTT
T ss_pred             eeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceEECHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+++.+++++++..||.+++.+|+.++....
T Consensus       211 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~  243 (280)
T 2f6q_A          211 TFQKEVWTRLKAFAKLPPNALRISKEVIRKRER  243 (280)
T ss_dssp             THHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999987644

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=99.98  E-value=5.8e-33  Score=212.56  Aligned_cols=137  Identities=17%  Similarity=0.222  Sum_probs=123.7

Q ss_pred             ccccCCCCCCcchhhhhhhchh-----hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccccccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI-----QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTM   67 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~-----~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~   67 (152)
                      |+||    +|+|++++......     ..+..+             +|+|||++|+++||+||++++++|++||+++|++
T Consensus        58 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~  133 (243)
T 2q35_A           58 NYFS----SGASKEFLIRKTRGEVEVLDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFT  133 (243)
T ss_dssp             TEEE----CBSCHHHHHHHHTTCCCCCCCHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSC
T ss_pred             CCee----CCCChHHHhhccchhhHHHHHHHHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCC
Confidence            6899    99999987542111     111111             9999999999999999999999999999999999


Q ss_pred             CCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281          68 PGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus        68 p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      |+.+++++|++++|++++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++....
T Consensus       134 p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~  212 (243)
T 2q35_A          134 PVGATSLILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLVALKQHLSADIK  212 (243)
T ss_dssp             CCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999987544

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=99.98  E-value=4.9e-33  Score=214.87  Aligned_cols=142  Identities=25%  Similarity=0.346  Sum_probs=125.3

Q ss_pred             cccccCCCCCCcchhhhhhhchh---------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI---------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~---------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      +|+||    +|+||+++.+....         ..+..+             +|+|||++|+++||+||++++++|++||+
T Consensus        59 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~  134 (261)
T 1ef8_A           59 SKVFS----AGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPV  134 (261)
T ss_dssp             CSEEE----CCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHH
T ss_pred             CCeee----cCcChHhhhccCchhHHHHHHHHHHHHHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchh
Confidence            38999    99999987542111         011111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++
T Consensus       135 ~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~  214 (261)
T 1ef8_A          135 NLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELR  214 (261)
T ss_dssp             HHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             ccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCCCC
Q psy9281         143 IDDTEGLN  150 (152)
Q Consensus       143 ~~~~~~l~  150 (152)
                      .....+++
T Consensus       215 ~~~~~~~~  222 (261)
T 1ef8_A          215 VLGEAHTM  222 (261)
T ss_dssp             HHHHCCCC
T ss_pred             HhhcCCHH
Confidence            87665554

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}

Probab=99.98  E-value=1.2e-32  Score=214.20  Aligned_cols=136  Identities=33%  Similarity=0.495  Sum_probs=118.8

Q ss_pred             ccccCCCCCCcchhhhhhhchh-----------hhhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI-----------QCLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~-----------~~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      |+||    +|+||+++......           ..+..+             +|+|||++|+++||+||++++++|++||
T Consensus        71 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe  146 (275)
T 4eml_A           71 YAFC----SGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTG  146 (275)
T ss_dssp             CEEE----CCBCCC--------------CCCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCH
T ss_pred             Ccee----CCcChhhhhcccccchhhHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcc
Confidence            6999    99999987542110           001111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.+++++|++++|..+|++++++|++++++||+++||||+++|++++.+++.+++++|+..||.+++.+|+.+
T Consensus       147 ~~~Gl~p~~~g~~~L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l  226 (275)
T 4eml_A          147 PKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAF  226 (275)
T ss_dssp             HHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             cccCCCCCccHHHHHHHHhHHHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999888888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccc
Q psy9281         142 NIDD  145 (152)
Q Consensus       142 ~~~~  145 (152)
                      +...
T Consensus       227 ~~~~  230 (275)
T 4eml_A          227 NADC  230 (275)
T ss_dssp             HHTT
T ss_pred             Hhhh
Confidence            8754

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=99.98  E-value=1.4e-32  Score=216.68  Aligned_cols=116  Identities=24%  Similarity=0.421  Sum_probs=111.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       150 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~  229 (305)
T 3m6n_A          150 NALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRG  229 (305)
T ss_dssp             CEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred             EeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.+++++|+. +|.+++.+|+.++.....+++
T Consensus       230 ~l~~~a~~~a~~la~-~p~a~~~~K~~l~~~~~~~l~  265 (305)
T 3m6n_A          230 QGVAAVEQVIRESKR-TPHAWAAMQQVREMTTAVPLE  265 (305)
T ss_dssp             CHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTTCCCHH
T ss_pred             HHHHHHHHHHHHHhh-ChHHHHHHHHHHHhhhcCCHH
Confidence            999999999999986 899999999999987766553

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=99.98  E-value=4.3e-32  Score=210.24  Aligned_cols=133  Identities=23%  Similarity=0.325  Sum_probs=120.6

Q ss_pred             ccccCCCCCCcchhhhh---hhchhh--h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           6 KLFILIDYEQKDLYRSK---NLKFIQ--C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~---~~~~~~--~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      |+||    +|+||+++.   ......  .       +..+             +|+|||++|+++||+||++++++|++|
T Consensus        60 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~p  135 (266)
T 3fdu_A           60 HDFT----AGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIP  135 (266)
T ss_dssp             SCSB----CCBCHHHHHHHHHSCCCSCGGGSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECC
T ss_pred             CCeE----CCcCHHHHhhhccccchhhHHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECc
Confidence            6899    999999986   322110  0       1111             999999999999999999999999999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.|++++|++++|..++++++++|++++++||+++||||+++|  ++.+++.+++++++..||.+++.+|+.
T Consensus       136 e~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~~~K~~  213 (266)
T 3fdu_A          136 FVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLKQTKAL  213 (266)
T ss_dssp             TTTTTCCCCTTHHHHHHHHHCHHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             hhhhCCCCcchHHHHHHHHhCHHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999  899999999999999999999999999


Q ss_pred             Hhcc
Q psy9281         141 VNID  144 (152)
Q Consensus       141 l~~~  144 (152)
                      ++..
T Consensus       214 l~~~  217 (266)
T 3fdu_A          214 MKHD  217 (266)
T ss_dssp             HTTT
T ss_pred             HHhh
Confidence            9875

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=99.98  E-value=9.7e-33  Score=215.97  Aligned_cols=139  Identities=29%  Similarity=0.432  Sum_probs=123.5

Q ss_pred             ccccCCCCCCcchhhhhhhchhh-----------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ-----------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~-----------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      |+||    +|+||+++......+           .+..+             +|+|||++|+++||+||++++++|++||
T Consensus        88 ~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe  163 (287)
T 2vx2_A           88 PVFS----SGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPG  163 (287)
T ss_dssp             SEEE----CCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred             CCcc----CCcCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECch
Confidence            7899    999999875432111           01111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++|+.++++ |++++|..++++++++|++++++||+++||||+++|++++.+++.+++++|+..||.+++.+|+.+
T Consensus       164 ~~lGl~p~~g~~~-L~r~vG~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l  242 (287)
T 2vx2_A          164 VNVGLFCSTPGVA-LARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATF  242 (287)
T ss_dssp             GGGTCCCHHHHHH-HHTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             hhhCCCCchHHHH-HHHHhhHHHHHHHHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            9999999999999 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCC
Q psy9281         142 NIDDTEGL  149 (152)
Q Consensus       142 ~~~~~~~l  149 (152)
                      +.....++
T Consensus       243 ~~~~~~~l  250 (287)
T 2vx2_A          243 YKQLPQDL  250 (287)
T ss_dssp             HHHTTSCH
T ss_pred             HHhhcCCH
Confidence            87665544

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3

Probab=99.98  E-value=2e-32  Score=211.80  Aligned_cols=114  Identities=23%  Similarity=0.326  Sum_probs=110.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       114 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  193 (264)
T 1wz8_A          114 VAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDE  193 (264)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHHHHHHTSSSEEECGG
T ss_pred             eeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCceeecChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTE  147 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~  147 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....
T Consensus       194 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~  227 (264)
T 1wz8_A          194 KVYEKALEVAERLAQGPKEALHHTKHALNHWYRS  227 (264)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999876543

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=99.98  E-value=1e-32  Score=213.35  Aligned_cols=116  Identities=24%  Similarity=0.376  Sum_probs=110.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++ +.+++++|++++|+.++++++++|++++++||+++||||+++|++
T Consensus       114 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~  192 (263)
T 3l3s_A          114 IATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGRRAVTEMALTGATYDADWALAAGLINRILPEA  192 (263)
T ss_dssp             EEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCHHHHHHHHHHCCEEEHHHHHHHTSSSEECCHH
T ss_pred             EEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEEeCHH
Confidence            9999999999999999999999999999999999 567889999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....+++
T Consensus       193 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~  229 (263)
T 3l3s_A          193 ALATHVADLAGALAARNQAPLRRGLETLNRHLELPLE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSCHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence            9999999999999999999999999999987766543

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=99.98  E-value=1.5e-32  Score=214.77  Aligned_cols=140  Identities=24%  Similarity=0.370  Sum_probs=124.8

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh-----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC-----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~-----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      |+||    +|+||+++........           +..+             +|+|||++|+++||+||++++++|++||
T Consensus        81 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe  156 (286)
T 3myb_A           81 KAFC----AGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSG  156 (286)
T ss_dssp             SCSB----CCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGG
T ss_pred             CCcc----CCcChhhhhccccHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcc
Confidence            7899    9999999865211111           1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAV  141 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l  141 (152)
                      +++|++ +.+++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.+
T Consensus       157 ~~lGl~-~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l  235 (286)
T 3myb_A          157 INVGLF-CSTPGVALSRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVAMGKALF  235 (286)
T ss_dssp             GGGTCC-CHHHHHHHTTTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred             cccCCC-CchHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            999999 7788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccccCCCC
Q psy9281         142 NIDDTEGLN  150 (152)
Q Consensus       142 ~~~~~~~l~  150 (152)
                      +.....+++
T Consensus       236 ~~~~~~~l~  244 (286)
T 3myb_A          236 YRQIETDIE  244 (286)
T ss_dssp             HHHHTSCHH
T ss_pred             HHhhcCCHH
Confidence            987665543

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=99.98  E-value=1.6e-32  Score=211.13  Aligned_cols=115  Identities=36%  Similarity=0.544  Sum_probs=111.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+ +++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       104 ~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~  182 (253)
T 1uiy_A          104 PAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPG  182 (253)
T ss_dssp             CEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTT
T ss_pred             eeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHHHhCCccCHHHHHHCCCcceecChh
Confidence            99999999999999999999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       183 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~  218 (253)
T 1uiy_A          183 KALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGL  218 (253)
T ss_dssp             CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCH
Confidence            999999999999999999999999999988766554

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=99.97  E-value=1.2e-32  Score=214.11  Aligned_cols=116  Identities=31%  Similarity=0.505  Sum_probs=111.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCH-HHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGK-SNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~-~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|. .++++++++|++++++||+++||||+++|+
T Consensus       117 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~  196 (275)
T 1dci_A          117 GCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPD  196 (275)
T ss_dssp             EEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESS
T ss_pred             eeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCC
Confidence            9999999999999999999999999999999999999999999999999 999999999999999999999999999998


Q ss_pred             -chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCC
Q psy9281         113 -EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       113 -~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                       +++.+++.+++++++..||.+++.+|+.++.....++
T Consensus       197 ~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~  234 (275)
T 1dci_A          197 KDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSV  234 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCH
T ss_pred             hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCH
Confidence             9999999999999999999999999999987655443

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A

Probab=99.97  E-value=3.4e-32  Score=216.77  Aligned_cols=113  Identities=31%  Similarity=0.475  Sum_probs=110.0

Q ss_pred             hhchHHHHHHHHcCeeEec-CCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~-~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++ ++++|++||+++|++|+.+++++|++++|..+|++++++|++++++||+++||||+|+|+
T Consensus       177 ~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~  256 (334)
T 3t8b_A          177 WAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEH  256 (334)
T ss_dssp             EEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECG
T ss_pred             ccccCcchhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCH
Confidence            9999999999999999999 999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      +++.+++.+++++|+..||.+++.+|++++....
T Consensus       257 ~~l~~~a~~~A~~ia~~~p~a~~~~K~~l~~~~~  290 (334)
T 3t8b_A          257 AELETVGLQWAAEINAKSPQAQRMLKFAFNLLDD  290 (334)
T ss_dssp             GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999987643

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=99.97  E-value=4.3e-32  Score=210.03  Aligned_cols=117  Identities=39%  Similarity=0.591  Sum_probs=112.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++
T Consensus       112 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~  191 (265)
T 3rsi_A          112 ACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAG  191 (265)
T ss_dssp             CEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTT
T ss_pred             eeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCccEecChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....+++
T Consensus       192 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~  228 (265)
T 3rsi_A          192 TALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEE  228 (265)
T ss_dssp             CHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence            9999999999999999999999999999987665543

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=99.97  E-value=5.6e-32  Score=210.12  Aligned_cols=141  Identities=31%  Similarity=0.481  Sum_probs=122.9

Q ss_pred             cccccCCCCCCcchhhhhhhchhh----------hhhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ----------CLKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~----------~~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +|+||    +|+||+++......+          .+..+             +|+|||++|+++||+||++++++|++||
T Consensus        67 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe  142 (272)
T 1hzd_A           67 PGIFC----AGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE  142 (272)
T ss_dssp             TEEEE----CCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred             CCCCc----CCCChhhhhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCch
Confidence            37899    999999875422111          01111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchH----HHHHHHHHHHHhcCCHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL----LEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l----~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                      +++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|++++    .+.+.+++++++..||.+++.+
T Consensus       143 ~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~~~~  222 (272)
T 1hzd_A          143 TKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVA  222 (272)
T ss_dssp             GGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHHHH
T ss_pred             hccCCCCCchHHHHHHHHhCHHHHHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            999999999999999999999999999999999999999999999999998764    5578899999999999999999


Q ss_pred             HHHHhccccCCC
Q psy9281         138 KEAVNIDDTEGL  149 (152)
Q Consensus       138 K~~l~~~~~~~l  149 (152)
                      |+.++.....++
T Consensus       223 K~~l~~~~~~~~  234 (272)
T 1hzd_A          223 KLAINQGMEVDL  234 (272)
T ss_dssp             HHHHHHHHTSCH
T ss_pred             HHHHHHHhcCCH
Confidence            999987665443

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A

Probab=99.97  E-value=4.5e-32  Score=212.36  Aligned_cols=112  Identities=33%  Similarity=0.568  Sum_probs=108.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       133 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~  212 (289)
T 3t89_A          133 YSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLA  212 (289)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGG
T ss_pred             EeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHHHHHHHHHcCCcccHHHHHHCCCceEeeCHH
Confidence            99999999999999999999999999999999887777788999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++.+++.+++++|+..||.+++.+|+.++...
T Consensus       213 ~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~  244 (289)
T 3t89_A          213 DLEKETVRWCREMLQNSPMALRCLKAALNADC  244 (289)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999998754

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=99.97  E-value=1.9e-32  Score=213.26  Aligned_cols=136  Identities=26%  Similarity=0.353  Sum_probs=122.3

Q ss_pred             ccccCCCCCCcchhhhhhhchhh-----h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQ-----C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~-----~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      |+||    +|+||+++.......     .       +..+             +|+|||++|+++||+||++++++|++|
T Consensus        83 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~p  158 (276)
T 3rrv_A           83 RAFS----AGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADP  158 (276)
T ss_dssp             TCSB----CCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECC
T ss_pred             Cccc----CCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECc
Confidence            7899    999999886532110     0       1111             999999999999999999999999999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++  +++.+++.+++++++..||.+++.+|+.
T Consensus       159 e~~~Gl~p~~g~~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~~~K~~  236 (276)
T 3rrv_A          159 HVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVESTKRV  236 (276)
T ss_dssp             HHHHTCCCCSSHHHHGGGTSCHHHHHHHHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred             hhccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999  8999999999999999999999999999


Q ss_pred             HhccccC
Q psy9281         141 VNIDDTE  147 (152)
Q Consensus       141 l~~~~~~  147 (152)
                      ++.....
T Consensus       237 l~~~~~~  243 (276)
T 3rrv_A          237 LNIHLER  243 (276)
T ss_dssp             HHHHHHH
T ss_pred             HHHhhhc
Confidence            9875543

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}

Probab=99.97  E-value=9.8e-32  Score=208.87  Aligned_cols=109  Identities=36%  Similarity=0.569  Sum_probs=107.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|..++++++++|++++++||+++||||+++|++
T Consensus       117 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~  196 (273)
T 2uzf_A          117 YAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLE  196 (273)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHHHHHTCCCEEHHHHHHHTSSSEEECGG
T ss_pred             EEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHcCCCccccCHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++.+++.+++++++..||.+++.+|+.++
T Consensus       197 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~  225 (273)
T 2uzf_A          197 KVEDETVQWCKEIMKHSPTALRFLKAAMN  225 (273)
T ss_dssp             GSHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            99999999999999999999999999997

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A

Probab=99.97  E-value=1.2e-31  Score=208.95  Aligned_cols=113  Identities=20%  Similarity=0.262  Sum_probs=108.1

Q ss_pred             hhchHHHHHHHHcCeeEec-CCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~-~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++ ++++|++||+++|++|+++++++|++++|..++++++++|++++++||+++||||+++|+
T Consensus       122 ~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~  201 (280)
T 1pjh_A          122 PAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNM  201 (280)
T ss_dssp             CEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCC
T ss_pred             eeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCC
Confidence            9999999999999999999 999999999999999999999999999999999999999999999999999999999997


Q ss_pred             c-----hHHHHHH-HHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         113 E-----KLLEETI-KLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       113 ~-----~l~~~~~-~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      +     ++.+++. +++++++..||.+++.+|+.++....
T Consensus       202 ~~~~~~~l~~~a~~~~a~~la~~~~~a~~~~K~~l~~~~~  241 (280)
T 1pjh_A          202 PSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHI  241 (280)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTH
T ss_pred             ccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHH
Confidence            5     7888885 99999999999999999999987654

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}

Probab=99.97  E-value=3.4e-31  Score=203.92  Aligned_cols=131  Identities=21%  Similarity=0.257  Sum_probs=117.9

Q ss_pred             ccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      |+||    +|+||+++........          +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        61 ~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~  136 (254)
T 3isa_A           61 RNFS----AGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGL  136 (254)
T ss_dssp             TCSC----CCBCCTTCTTSCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGG
T ss_pred             Ccee----eCcChHHhhccCchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchh
Confidence            7899    9999999865332211          1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|   ++++|++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.++
T Consensus       137 ~~Gl~p---g~~~l~~~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~  213 (254)
T 3isa_A          137 KFGLVL---GTRRFRDIVGADQALSILGSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRATLHRVLR  213 (254)
T ss_dssp             GGTCCC---SHHHHHHHHCHHHHHHHHTTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHHHHHHHHS
T ss_pred             ccCccH---HHHHHHHHcCHHHHHHHHHhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence            999998   36889999999999999999999999999999999999999999999999999999999999999999985


Q ss_pred             c
Q psy9281         143 I  143 (152)
Q Consensus       143 ~  143 (152)
                      .
T Consensus       214 ~  214 (254)
T 3isa_A          214 D  214 (254)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A

Probab=99.97  E-value=7.1e-32  Score=208.10  Aligned_cols=114  Identities=25%  Similarity=0.372  Sum_probs=109.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEec-ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQ-PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~-pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+| |++|+++||+||++++++|++ ||+++|++|+.+++++|++++|+.++++++++|++++++||+++||||+++|+
T Consensus       118 ~a~G-G~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~vv~~  196 (257)
T 1szo_A          118 PVTN-APEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSE  196 (257)
T ss_dssp             CBCS-STHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHHHHHHHTSCSEEECH
T ss_pred             chHH-HHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCceEEeCh
Confidence            8995 999999999999999999999 99999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      +++.+++.+++++++..||.+++.+|+.+++....+
T Consensus       197 ~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~  232 (257)
T 1szo_A          197 QELLPRAWELARGIAEKPLLARRYARKVLTRQLRRV  232 (257)
T ss_dssp             HHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999999998765443

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D

Probab=99.97  E-value=3.3e-32  Score=210.62  Aligned_cols=138  Identities=23%  Similarity=0.300  Sum_probs=122.7

Q ss_pred             ccccCCCCCCcchhhhhhhchh----hh-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEec-c
Q psy9281           6 KLFILIDYEQKDLYRSKNLKFI----QC-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQ-P   60 (152)
Q Consensus         6 k~Fs~~~caG~Dl~~~~~~~~~----~~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~-p   60 (152)
                      |+||    +|+||+++......    ..       +..+             +|+ ||++|+++||+||++++++|++ |
T Consensus        79 ~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~p  153 (263)
T 2j5g_A           79 DAWM----AEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMP  153 (263)
T ss_dssp             TEEE----CEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCH
T ss_pred             CCcc----cCcCHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCc
Confidence            6899    99999987542111    00       1111             888 5899999999999999999999 9


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.+++++|++++|.+++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+.
T Consensus       154 e~~lGl~p~~g~~~~L~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~  233 (263)
T 2j5g_A          154 HLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVA  233 (263)
T ss_dssp             HHHHTCCCCSSHHHHHHHHHHHHHHHHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ccccccCCCccHHHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccccCC
Q psy9281         141 VNIDDTEG  148 (152)
Q Consensus       141 l~~~~~~~  148 (152)
                      ++.....+
T Consensus       234 l~~~~~~~  241 (263)
T 2j5g_A          234 LTQRLKRL  241 (263)
T ss_dssp             HHHHHHHH
T ss_pred             HHhhhhcc
Confidence            98765543

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=3e-31  Score=212.78  Aligned_cols=137  Identities=26%  Similarity=0.368  Sum_probs=119.7

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh-------------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEe
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC-------------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFG   58 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~-------------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~   58 (152)
                      +|+||    +|+||+++......+.             ...+             +|+|||++|+++||+||++++++|+
T Consensus        64 ~~~Fc----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~  139 (353)
T 4hdt_A           64 ERGLC----AGGDVVAIYHSAKADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMA  139 (353)
T ss_dssp             SSBSB----CCBCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEE
T ss_pred             CCCEe----cCcCHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhcccc
Confidence            58999    9999999854322111             1111             9999999999999999999999999


Q ss_pred             cccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHH----------------
Q psy9281          59 QPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKL----------------  122 (152)
Q Consensus        59 ~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~----------------  122 (152)
                      +||+++|++|+.|++++|++.+| ++++++++||++++++||+++||||+++|++++.+.+.++                
T Consensus       140 ~pe~~iGl~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~  218 (353)
T 4hdt_A          140 MPEVGIGFIPDVGGTYLLSRAPG-KLGLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEP  218 (353)
T ss_dssp             CCGGGGTCCCCTTHHHHHHTSST-THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCC
T ss_pred             CcccccccCCCccceehhhhhhh-HHHHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccC
Confidence            99999999999999999999888 6999999999999999999999999999999998887665                


Q ss_pred             ---------------------------------------HHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         123 ---------------------------------------AERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       123 ---------------------------------------a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                                                             ++.|++++|.+++.+|+.+++...
T Consensus       219 ~~~~l~~~~~~i~~~f~~~~~~~i~~~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~  281 (353)
T 4hdt_A          219 PASPLAEQRSWIDECYTGDTVADIIAALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAK  281 (353)
T ss_dssp             CCCHHHHTHHHHHHHTTCSSHHHHHHHHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTT
T ss_pred             CccchHHHHHHHHHHhCCCCHHHHHHHHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Confidence                                                   455889999999999999987655

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=99.97  E-value=2.2e-31  Score=206.17  Aligned_cols=112  Identities=28%  Similarity=0.364  Sum_probs=107.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|+ ++|..++++++++|++++++||+++||||++  ++
T Consensus       118 ~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~  194 (267)
T 3oc7_A          118 HVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSARAAARYYLTGEKFDARRAEEIGLITMA--AE  194 (267)
T ss_dssp             EEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CS
T ss_pred             eecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hH
Confidence            99999999999999999999999999999999999999999999 9999999999999999999999999999999  78


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEG  148 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~  148 (152)
                      ++.+++.+++++++..||.+++.+|+.++.....+
T Consensus       195 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~  229 (267)
T 3oc7_A          195 DLDAAIDQLVTDVGRGSPQGLAASKALTTAAVLER  229 (267)
T ss_dssp             SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCC
Confidence            89999999999999999999999999998765433

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=99.97  E-value=1.9e-30  Score=201.11  Aligned_cols=133  Identities=19%  Similarity=0.169  Sum_probs=115.5

Q ss_pred             cccccCCCCCCcchhhhhhhchh--h---h-------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEec
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI--Q---C-------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQ   59 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~--~---~-------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~   59 (152)
                      .|+||    +|+||+++......  .   .       +..+             +|+|||++|+++||+||++++++|++
T Consensus        60 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~  135 (267)
T 3hp0_A           60 PEVFC----FGADFQEIYQEMKRGRKQASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSL  135 (267)
T ss_dssp             SSCSB----CCBCHHHHHHTTTTTCCSCCCCHHHHHHHHHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEEC
T ss_pred             CCcee----cCcCHHHHHhcccChHHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEEC
Confidence            37899    99999998653210  0   0       1111             99999999999999999999999999


Q ss_pred             ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281          60 PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus        60 pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      ||+++|++|+++ +++|++++|..+|++++++|++++++||+++||||+++|+++  +.+.+++++++..||.+++.+|+
T Consensus       136 pe~~~Gl~p~~g-~~~l~r~vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~~~K~  212 (267)
T 3hp0_A          136 SELLFGLYPACV-LPFLIRRIGRQKAHYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIAHYKQ  212 (267)
T ss_dssp             CGGGGTCCCTTT-HHHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             chhccCcCchhH-HHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHHHHHH
Confidence            999999999886 567999999999999999999999999999999999998644  35789999999999999999999


Q ss_pred             HHhcc
Q psy9281         140 AVNID  144 (152)
Q Consensus       140 ~l~~~  144 (152)
                      .++..
T Consensus       213 ~l~~~  217 (267)
T 3hp0_A          213 FMSSL  217 (267)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99875

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A

Probab=99.97  E-value=1.2e-30  Score=207.90  Aligned_cols=110  Identities=27%  Similarity=0.365  Sum_probs=106.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+   +|++++|.+++++++++|++++++||+++||||+++|++
T Consensus       167 ~a~GgG~~LalacD~rias~~a~f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~  243 (333)
T 3njd_A          167 YCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPA  243 (333)
T ss_dssp             EEETHHHHHHTTSSEEEECTTCEEECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGG
T ss_pred             EEeHHHHHHHHhCCEEEECCCCeeechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChH
Confidence            99999999999999999999999999999999999876   489999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+++.+++++|+..||.+++.+|++++....
T Consensus       244 ~l~~~a~~lA~~ia~~~~~al~~~K~~l~~~~~  276 (333)
T 3njd_A          244 DLDARTERLVERIAAMPVNQLIMAKLACNTALL  276 (333)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998654

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.5e-30  Score=199.30  Aligned_cols=107  Identities=27%  Similarity=0.384  Sum_probs=103.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+++++|++++|+.++++++++|++++++||+++||||++++  
T Consensus       117 ~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~v~~--  194 (264)
T 3he2_A          117 PAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT--  194 (264)
T ss_dssp             CEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECC--
T ss_pred             cEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHHcCCCccHHHHHHCCCeEEEec--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999986  


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                        .+++.+++++++..||.+++.+|+.++..
T Consensus       195 --~~~a~~~A~~la~~~p~a~~~~K~~l~~~  223 (264)
T 3he2_A          195 --LADAQAWAAEIARLAPLAIQHAKRVLNDD  223 (264)
T ss_dssp             --HHHHHHHHHHHHTSCHHHHHHHHHHHHTS
T ss_pred             --HHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Confidence              36789999999999999999999999986

>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A

Probab=99.97  E-value=1.7e-30  Score=202.41  Aligned_cols=111  Identities=32%  Similarity=0.445  Sum_probs=103.6

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|+.|. ++.. +++++|+.++++++++|++++++||+++||||+++|++
T Consensus       127 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~~~-~~~~-~~~~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~  204 (279)
T 3t3w_A          127 RCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGGV-EYHG-HTWELGPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRD  204 (279)
T ss_dssp             EEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCSSC-SSCC-HHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGG
T ss_pred             eEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCCCc-hHHH-HHhhcCHHHHHHHHHcCCccCHHHHHHCCCCcEeeChH
Confidence            999999999999999999999999999999999444 3333 49999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhcccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDT  146 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~  146 (152)
                      ++.+++.+++++++..||.+++.+|+.+++...
T Consensus       205 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~  237 (279)
T 3t3w_A          205 RLDAETRALAGEIAKMPPFALRQAKRAVNQTLD  237 (279)
T ss_dssp             GHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Confidence            999999999999999999999999999987653

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}

Probab=99.96  E-value=3.7e-30  Score=207.12  Aligned_cols=115  Identities=27%  Similarity=0.375  Sum_probs=106.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|. ++++++++|++++++||+++||||+++|++
T Consensus       112 ~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~a~~l~ltg~~i~A~eA~~~GLv~~vv~~~  190 (363)
T 3bpt_A          112 ITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-LGYFLALTGFRLKGRDVYRAGIATHFVDSE  190 (363)
T ss_dssp             EEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-HHHHHHHHCCCEETHHHHHTTSCSEECCGG
T ss_pred             EEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-HHHHHHHcCCCCCHHHHHHCCCcceecCHH
Confidence            9999999999999999999999999999999999999999999999997 999999999999999999999999999988


Q ss_pred             hHHHHH---------------------------------------------------H---------------HHHHHHh
Q psy9281         114 KLLEET---------------------------------------------------I---------------KLAERIG  127 (152)
Q Consensus       114 ~l~~~~---------------------------------------------------~---------------~~a~~l~  127 (152)
                      ++.+.+                                                   .               +++++|+
T Consensus       191 ~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~ei~~al~~~~~~~a~~~a~~la  270 (363)
T 3bpt_A          191 KLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGSSFALEQLKVIN  270 (363)
T ss_dssp             GHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHHTTSSSHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHHhCCCCHHHHHHHHhccChHHHHHHHHHHH
Confidence            876432                                                   2               5788999


Q ss_pred             cCCHHHHHHHHHHHhccccCCC
Q psy9281         128 EHSPLIVTQVKEAVNIDDTEGL  149 (152)
Q Consensus       128 ~~~~~a~~~~K~~l~~~~~~~l  149 (152)
                      +.||.+++.+|+.++.....++
T Consensus       271 ~~sP~al~~~k~~l~~~~~~~l  292 (363)
T 3bpt_A          271 KMSPTSLKITLRQLMEGSSKTL  292 (363)
T ss_dssp             TSCHHHHHHHHHHHHHHTTSCH
T ss_pred             hCCchHHHHHHHHHHHHHhCCH
Confidence            9999999999999988766554

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=99.96  E-value=5.1e-30  Score=208.92  Aligned_cols=116  Identities=21%  Similarity=0.280  Sum_probs=106.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++| .++++++++|++++++||+++||||+++|++
T Consensus       152 ~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g-~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~  230 (407)
T 3ju1_A          152 IVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG-KMGLFLGLTAYHMNAADACYVGLADHYLNRD  230 (407)
T ss_dssp             EEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST-THHHHHHHHCCCBCHHHHHHHTSCSEECCGG
T ss_pred             ccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH-HHHHHHHHcCCcCcHHHHHHCCCccEEcCHH
Confidence            999999999999999999999999999999999999999999999999 9999999999999999999999999999998


Q ss_pred             hHHH---H----------------HHHH----------------------------------------------------
Q psy9281         114 KLLE---E----------------TIKL----------------------------------------------------  122 (152)
Q Consensus       114 ~l~~---~----------------~~~~----------------------------------------------------  122 (152)
                      ++.+   +                +.++                                                    
T Consensus       231 ~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~~I~~~f~~sv~~i~~~L~~~~~~~~~a~~~  310 (407)
T 3ju1_A          231 DKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEMIDRLMAGSLTDIVTRMSTLSTDEAWLSKA  310 (407)
T ss_dssp             GHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHHHHHHHTCSCHHHHHHHHHHCCCSCHHHHHH
T ss_pred             HHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHHHHHHHhcCCHHHHHHHHHhcccccHHHHHH
Confidence            8776   3                3221                                                    


Q ss_pred             HHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         123 AERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       123 a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      +++|+..||.+++.+|+.+++....+++
T Consensus       311 a~~la~~sP~sl~~tk~~l~~~~~~~l~  338 (407)
T 3ju1_A          311 CATMLAGSPISWHLAYIQTQLGTKLSLA  338 (407)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHTTTCSCHH
T ss_pred             HHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence            4788999999999999999988776654

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=99.95  E-value=4.1e-28  Score=209.73  Aligned_cols=122  Identities=31%  Similarity=0.506  Sum_probs=108.8

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTM   67 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~   67 (152)
                      .|.||    +|+||+++........    +..+             +|+|||++|+++||+||++++++|++||+++|++
T Consensus        74 g~~F~----aGaDl~~~~~~~~~~~~~~~~~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~  149 (742)
T 3zwc_A           74 NGNFC----AGADIHGFSAFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGIL  149 (742)
T ss_dssp             TTCSB----CCBCSSSCCSSCSCSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCC
T ss_pred             CCccc----cCcChHhhhccChhHHHHHHHHHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccC
Confidence            47899    9999999866443322    1222             9999999999999999999999999999999999


Q ss_pred             CCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCH
Q psy9281          68 PGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP  131 (152)
Q Consensus        68 p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~  131 (152)
                      |+.|++++|++++|..+|++++++|++++++||+++||||+|+|++. .+++.++|++++..++
T Consensus       150 Pg~ggt~rL~rlvG~~~A~~l~ltG~~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~  212 (742)
T 3zwc_A          150 PGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPI  212 (742)
T ss_dssp             CTTTHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCS
T ss_pred             CCccHHHHHHHhhhHHHHHHHHHcCCchhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999999998765 5688999999998775

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*

Probab=99.95  E-value=3.6e-28  Score=199.06  Aligned_cols=108  Identities=27%  Similarity=0.422  Sum_probs=101.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.+ +++|++++|..++++++++|++++++||+++||||+|+|++
T Consensus       294 ~A~GGG~eLALaCDirIAae~A~Fglpev~lGl~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~  372 (440)
T 2np9_A          294 FAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPD  372 (440)
T ss_dssp             EEETHHHHHGGGCSEEEEETTCEEECCCTTTCCCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHH
T ss_pred             cccccchHHHhhCCEEEEcCCCEEECchhccCcCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChH
Confidence            99999999999999999999999999999999999887 57899999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccc
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDD  145 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~  145 (152)
                      ++.+.+.+++++++   +.+++.+|+.++...
T Consensus       373 eL~~~a~~~A~~la---~~Av~~~K~~l~~~~  401 (440)
T 2np9_A          373 ELDAAIERSLTRLD---GDAVLANRRMLNLAD  401 (440)
T ss_dssp             HHHHHHHHHHHTTC---SHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC---HHHHHHHHHHHHhhh
Confidence            99999999988764   478999999998753

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=99.94  E-value=1.2e-27  Score=206.70  Aligned_cols=96  Identities=38%  Similarity=0.681  Sum_probs=94.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++++++|++++++||+++||||+++|++
T Consensus       112 ~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~  191 (725)
T 2wtb_A          112 LALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVVPPA  191 (725)
T ss_dssp             EEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECCTT
T ss_pred             ccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHHHHHHHcCCCCCHHHHHHCCccceEcChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC
Q psy9281         114 KLLEETIKLAERIGEH  129 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~  129 (152)
                      ++.+++.+++++++..
T Consensus       192 ~l~~~a~~~a~~la~~  207 (725)
T 2wtb_A          192 ELVTTARRWALDIVGR  207 (725)
T ss_dssp             THHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999999876

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=99.94  E-value=5.1e-27  Score=202.64  Aligned_cols=96  Identities=34%  Similarity=0.549  Sum_probs=94.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.|++++|++++|..+|++++++|++++++||+++||||+++|++
T Consensus       113 ~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~  192 (715)
T 1wdk_A          113 IALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAVVTAD  192 (715)
T ss_dssp             CEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGG
T ss_pred             EeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcC
Q psy9281         114 KLLEETIKLAERIGEH  129 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~  129 (152)
                      ++.+++.+++++++..
T Consensus       193 ~l~~~a~~~a~~la~~  208 (715)
T 1wdk_A          193 KLGAAALDLIKRAISG  208 (715)
T ss_dssp             GHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            9999999999999876

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=99.94  E-value=2.3e-28  Score=203.04  Aligned_cols=138  Identities=22%  Similarity=0.359  Sum_probs=120.2

Q ss_pred             cccccCCCCCCcchhhhhhhchh----------hh---h----hhh----------hhchHHHHHHHHcCeeEecCC--e
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFI----------QC---L----KIW----------IYLGGGCELAMMCDIIYAGEK--A   55 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~----------~~---~----~~~----------~a~G~G~~lal~cD~ria~~~--a   55 (152)
                      .|+||    +|+||+++......          ..   +    ..+          +|+|||++|+++||+||++++  +
T Consensus        87 G~~Fc----AGaDL~el~~~~~~~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A  162 (556)
T 2w3p_A           87 DRVFC----SGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSS  162 (556)
T ss_dssp             SSEEE----CEECHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSC
T ss_pred             CCccc----CCcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCc
Confidence            47899    99999987542210          00   2    222          999999999999999999999  9


Q ss_pred             EEeccccc-ccccCCccHHHHHH--HHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHH
Q psy9281          56 KFGQPEII-IGTMPGAGGTQRLT--RAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPL  132 (152)
Q Consensus        56 ~f~~pe~~-~G~~p~~~~~~~l~--~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~  132 (152)
                      +|++||++ +|++|+.|++++|+  +++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.
T Consensus       163 ~FglPEv~~LGL~Pg~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~  242 (556)
T 2w3p_A          163 SVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDR  242 (556)
T ss_dssp             EEECCHHHHHSSCCTTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEecccccccCCCCCccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChH
Confidence            99999999 99999999999999  9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccccC
Q psy9281         133 IVTQVKEAVNIDDTE  147 (152)
Q Consensus       133 a~~~~K~~l~~~~~~  147 (152)
                      +++. |+.++...+.
T Consensus       243 Av~~-K~l~~~~l~r  256 (556)
T 2w3p_A          243 PAHA-QGVPLTRIER  256 (556)
T ss_dssp             CTTC-CCCCCCCCCC
T ss_pred             HHhh-hhhhcchhhh
Confidence            8874 7665554433

>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A

Probab=99.31  E-value=3e-12  Score=96.84  Aligned_cols=106  Identities=19%  Similarity=0.219  Sum_probs=78.5

Q ss_pred             CCCCCcchhhhhhhchh------hhhhhh-----hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccH-------
Q psy9281          11 IDYEQKDLYRSKNLKFI------QCLKIW-----IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGG-------   72 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~------~~~~~~-----~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~-------   72 (152)
                      |||.|+|+.........      +.+..+     .|.|+|+.|+++||++++.++++|+.++...+. |..|.       
T Consensus        46 inspGG~v~~~~~i~~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k  124 (230)
T 3viv_A           46 LDTPGGRADAMMNIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPA  124 (230)
T ss_dssp             EEBSCEEHHHHHHHHHHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHH
T ss_pred             EeCCCcCHHHHHHHHHHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHH
Confidence            46799998765432111      111111     788999999999999999999999999987532 32222       


Q ss_pred             --------HHHHHHHhCH--HHHHHHHHcCCCCCHHHHHHcCCccccCCc-chHHH
Q psy9281          73 --------TQRLTRAAGK--SNAMEICLTGNQFTAQEAKEMGVVSKIFPP-EKLLE  117 (152)
Q Consensus        73 --------~~~l~~~~g~--~~a~~lll~g~~~~a~ea~~~Glv~~v~~~-~~l~~  117 (152)
                              ...+.++.|.  .++++++..++.++++||+++||||+++++ +++.+
T Consensus       125 ~~~~~~~~~~~la~~~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~~~~ll~  180 (230)
T 3viv_A          125 ITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELLK  180 (230)
T ss_dssp             HHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCCHHHHHH
Confidence                    1246777884  899999999999999999999999999974 44443

>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}

Probab=99.31  E-value=2.7e-12  Score=97.62  Aligned_cols=90  Identities=17%  Similarity=0.199  Sum_probs=70.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecc---------------------cccccccCCccH--------------------
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQP---------------------EIIIGTMPGAGG--------------------   72 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~p---------------------e~~~G~~p~~~~--------------------   72 (152)
                      +|.|+|+.|+++||++++++++.|+.+                     +++.|-.++.+.                    
T Consensus        89 ~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~  168 (240)
T 3rst_A           89 MAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNS  168 (240)
T ss_dssp             EEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHH
T ss_pred             eehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHH
Confidence            899999999999999999999999999                     556676555431                    


Q ss_pred             ------HHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHH
Q psy9281          73 ------TQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAE  124 (152)
Q Consensus        73 ------~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~  124 (152)
                            ...-.|.++....+. +.+|+.+++++|++.||||++.+.+++.+.+.+++.
T Consensus       169 ~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~~~~  225 (240)
T 3rst_A          169 YEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHK  225 (240)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHHHhC
Confidence                  111233455555555 788999999999999999999987777766665544

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=99.27  E-value=7.6e-13  Score=112.25  Aligned_cols=91  Identities=20%  Similarity=0.274  Sum_probs=76.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccc------------cccccCCc-------------cHH---------------
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEI------------IIGTMPGA-------------GGT---------------   73 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~------------~~G~~p~~-------------~~~---------------   73 (152)
                      +|.|||+.++++||+++|++++.|+.+++            ++|+.|+.             +.+               
T Consensus       381 ~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~~~l~~~l~~~~  460 (593)
T 3bf0_A          381 MAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGY  460 (593)
T ss_dssp             EEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHHHHHHHHHHHHH
Confidence            89999999999999999999999999985            58886532             111               


Q ss_pred             HHHHHHhCHHH-----HHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHH
Q psy9281          74 QRLTRAAGKSN-----AMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAE  124 (152)
Q Consensus        74 ~~l~~~~g~~~-----a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~  124 (152)
                      ..+++.++..+     +.+++++|+.++++||+++||||++++.+++.+.+.++++
T Consensus       461 ~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~  516 (593)
T 3bf0_A          461 KRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK  516 (593)
T ss_dssp             HHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence            45778888877     8999999999999999999999999988888777766543

>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1

Probab=99.10  E-value=1.5e-10  Score=86.87  Aligned_cols=80  Identities=18%  Similarity=0.198  Sum_probs=63.8

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccH------------------HHHHHHHhCH--HHHHHHHHc
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGG------------------TQRLTRAAGK--SNAMEICLT   91 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~------------------~~~l~~~~g~--~~a~~lll~   91 (152)
                      .|.++|+.++++||.  |++.++++|++++.. |..+..|.                  ...+.+..|.  .++++++..
T Consensus       113 ~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~  191 (218)
T 1y7o_A          113 MAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAER  191 (218)
T ss_dssp             EEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHS
T ss_pred             EeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhC
Confidence            899999999999999  999999999999987 43332222                  2446777774  588999999


Q ss_pred             CCCCCHHHHHHcCCccccCCcch
Q psy9281          92 GNQFTAQEAKEMGVVSKIFPPEK  114 (152)
Q Consensus        92 g~~~~a~ea~~~Glv~~v~~~~~  114 (152)
                      ++.++++||+++||||+++++++
T Consensus       192 ~~~~ta~EA~e~GLVD~v~~~~~  214 (218)
T 1y7o_A          192 DNWMSAQETLEYGFIDEIMANNS  214 (218)
T ss_dssp             CCCBCHHHHHHHTSCSEECCCC-
T ss_pred             CCEEcHHHHHHCCCCcEEcCcCC
Confidence            99999999999999999998765

>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=98.97  E-value=2.5e-10  Score=90.77  Aligned_cols=93  Identities=14%  Similarity=0.071  Sum_probs=72.8

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .|.|||+.+++.||++||.++++|++      +.|.++++..+++..+...+.++    +.+++++|+++|+||+|+|..
T Consensus       222 ~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ep  291 (339)
T 2f9y_A          222 EGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIPEP  291 (339)
T ss_dssp             EEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCCCS
T ss_pred             CcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEecCC
Confidence            89999999999999999999999997      45666666666666666777777    679999999999999999842


Q ss_pred             -------------hHHHHHHHHHHHHhcCCHHHHHH
Q psy9281         114 -------------KLLEETIKLAERIGEHSPLIVTQ  136 (152)
Q Consensus       114 -------------~l~~~~~~~a~~l~~~~~~a~~~  136 (152)
                                   ++.+...+..+.+...++..+..
T Consensus       292 ~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~  327 (339)
T 2f9y_A          292 LGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKN  327 (339)
T ss_dssp             TTCGGGCHHHHHHHHHHHHHHHTTTTTTSCHHHHHH
T ss_pred             CCCCccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence                         55555555666666667766543

>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=98.95  E-value=4e-10  Score=89.20  Aligned_cols=94  Identities=12%  Similarity=0.118  Sum_probs=70.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      .|.|||+.++++||+++|.++++|++      +.|.++++..+.+..+...+.++    +.+++++|+++|+||+|+|..
T Consensus       208 ~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ep  277 (327)
T 2f9i_A          208 EGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVISEP  277 (327)
T ss_dssp             EEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEECCC
T ss_pred             CcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEecCC
Confidence            89999999999999999999999885      34444444433333444666666    679999999999999999843


Q ss_pred             -------------hHHHHHHHHHHHHhcCCHHHHHHH
Q psy9281         114 -------------KLLEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus       114 -------------~l~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                                   ++.+...+..+.+...++..+...
T Consensus       278 ~gga~~~~~~~~~~lr~~l~~~L~~l~~~~~~~l~~~  314 (327)
T 2f9i_A          278 LGGAHKDIEQQALAIKSAFVAQLDSLESLSRDEIAND  314 (327)
T ss_dssp             TTCGGGCHHHHHHHHHHHHHHHHHTTTTCCHHHHHHH
T ss_pred             CCCCccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence                         566666666677767777655443

>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=98.75  E-value=5.5e-09  Score=81.95  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=68.6

Q ss_pred             hhchHH-HHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGG-CELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G-~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+||| +.++++||++++.++++|++.           +...+++.+|..      ++++..+++++.+.|+||.++++
T Consensus       201 ~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~~Ae~~~~~Glvd~Vv~~  263 (304)
T 2f9y_B          201 PTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQRSEFLIEKGAIDMIVRR  263 (304)
T ss_dssp             EEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTTBHHHHGGGTCCSEECCH
T ss_pred             CCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccCCHHHHHhcCCccEEeCc
Confidence            999999 777999999999999999987           344577777753      46888999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcC
Q psy9281         113 EKLLEETIKLAERIGEH  129 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~  129 (152)
                      +++.+.+.+++..+...
T Consensus       264 ~el~~~l~~ll~~l~~~  280 (304)
T 2f9y_B          264 PEMRLKLASILAKLMNL  280 (304)
T ss_dssp             HHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHhhcC
Confidence            99999999999999764

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=98.31  E-value=3.8e-06  Score=70.23  Aligned_cols=117  Identities=21%  Similarity=0.269  Sum_probs=96.2

Q ss_pred             hhchHH-HHHHHHcCeeEec-------CCeEEecccccccccCCccHHHHHHHHh-CHHHHH--HHHHcCCCCCHHHHHH
Q psy9281          34 IYLGGG-CELAMMCDIIYAG-------EKAKFGQPEIIIGTMPGAGGTQRLTRAA-GKSNAM--EICLTGNQFTAQEAKE  102 (152)
Q Consensus        34 ~a~G~G-~~lal~cD~ria~-------~~a~f~~pe~~~G~~p~~~~~~~l~~~~-g~~~a~--~lll~g~~~~a~ea~~  102 (152)
                      .|+.|- ++|+++||..|+-       +.+.+.+.+.++|..|-..+..+|.++. |..-..  ---..|+++++++|.+
T Consensus       386 ~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  465 (556)
T 2w3p_A          386 SCFAGTFAELAFAADRTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAER  465 (556)
T ss_dssp             CCEEGGGHHHHHTSSEEEECCCTTCTTTSCCEECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHH
T ss_pred             cchHHHHHHHHHHhhhhhhhcCCCCCCCCceeEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHh
Confidence            577665 8999999999983       2478999999999999888777888774 432222  2234499999999999


Q ss_pred             cCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         103 MGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       103 ~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      .|||+...++=+++++++-..++-++.+|.++..+...++..-.+.|+
T Consensus       466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (556)
T 2w3p_A          466 LGLVTASPDDIDWADEIRIALEERAAMSPDALTGLEANLRFNGPETME  513 (556)
T ss_dssp             TTSSSBCCCTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHSSCSCCCHH
T ss_pred             cCCeecCcccCChHHHHHHHHHHHhccCcchhccchhhcccCCchhhh
Confidence            999999888889999999999999999999999999999876665554

>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A

Probab=97.97  E-value=1.3e-05  Score=59.35  Aligned_cols=86  Identities=20%  Similarity=0.038  Sum_probs=56.2

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccC---CccH------------HHHHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMP---GAGG------------TQRLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p---~~~~------------~~~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|..+|..++++||.  |++.+++.++.....-|...   +...            ...+.+..|  .....+.+..++-
T Consensus        95 ~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~  174 (208)
T 2cby_A           95 MAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRW  174 (208)
T ss_dssp             EEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCE
T ss_pred             EeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcE
Confidence            789999999999998  99999999988765533210   0000            011333334  4456778889999


Q ss_pred             CCHHHHHHcCCccccCC-cchHHHHH
Q psy9281          95 FTAQEAKEMGVVSKIFP-PEKLLEET  119 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~-~~~l~~~~  119 (152)
                      ++++||+++||||++.+ .+++.++.
T Consensus       175 ~ta~eA~e~GLvD~i~~~~~~ll~~~  200 (208)
T 2cby_A          175 FTAAEALEYGFVDHIITRAHVNGEAQ  200 (208)
T ss_dssp             EEHHHHHHHTSCSEECSCC-------
T ss_pred             EcHHHHHHcCCCcEecCchHHHHHHH
Confidence            99999999999999997 35555443

>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A

Probab=97.45  E-value=0.00054  Score=50.54  Aligned_cols=80  Identities=23%  Similarity=0.194  Sum_probs=55.6

Q ss_pred             hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHH---------------HHHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGT---------------QRLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~---------------~~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|..+|..++++||  .|++.+++.+......-|..-...-.               ..+.+..|  .....+++-...-
T Consensus        95 ~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~  174 (203)
T 3qwd_A           95 MAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNF  174 (203)
T ss_dssp             EEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCC
T ss_pred             eehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCce
Confidence            78889999999999  59999999998765543321111000               01222333  4566677666677


Q ss_pred             CCHHHHHHcCCccccCCcc
Q psy9281          95 FTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~~~  113 (152)
                      ++++||+++||||++.++.
T Consensus       175 lta~EA~e~GliD~I~~~~  193 (203)
T 3qwd_A          175 LTAEEAKEYGLIDEVMVPE  193 (203)
T ss_dssp             EEHHHHHHHTSCSEECCCC
T ss_pred             ecHHHHHHcCCcCEecCCc
Confidence            9999999999999999754

>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1

Probab=97.31  E-value=0.00053  Score=50.94  Aligned_cols=79  Identities=8%  Similarity=-0.037  Sum_probs=53.8

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccC---CccH----HH--------HHHHH--hCHHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMP---GAGG----TQ--------RLTRA--AGKSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p---~~~~----~~--------~l~~~--~g~~~a~~lll~g~~   94 (152)
                      .|..+|..++++||.  |++.+++.+.+.....|...   +...    ..        .+.+.  .......+++-...-
T Consensus       106 ~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~  185 (215)
T 2f6i_A          106 LVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYY  185 (215)
T ss_dssp             EECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCE
T ss_pred             EhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCee
Confidence            788999999999999  99999999987665433211   1100    00        11122  234556666655566


Q ss_pred             CCHHHHHHcCCccccCCc
Q psy9281          95 FTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~~  112 (152)
                      ++++||+++||||++.++
T Consensus       186 lta~eA~e~GLiD~I~~~  203 (215)
T 2f6i_A          186 MNALEAKQYGIIDEVIET  203 (215)
T ss_dssp             ECHHHHHHHTSCSEECCC
T ss_pred             cCHHHHHHCCCCCEecCC
Confidence            799999999999999864

>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A

Probab=97.24  E-value=0.00024  Score=51.79  Aligned_cols=79  Identities=14%  Similarity=0.025  Sum_probs=53.3

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCC---ccHH------------HHHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPG---AGGT------------QRLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~---~~~~------------~~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|..+|..++++||.  |++.+++.++......|....   ....            ..+.+..|  .....+++-.+.-
T Consensus        94 ~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~  173 (193)
T 1yg6_A           94 QAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF  173 (193)
T ss_dssp             EEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEE
T ss_pred             eHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeE
Confidence            888999999999999  999999998776554332110   0000            01222333  4455555544556


Q ss_pred             CCHHHHHHcCCccccCCc
Q psy9281          95 FTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~~  112 (152)
                      ++++||+++||||++.++
T Consensus       174 ~ta~eA~~~GliD~i~~~  191 (193)
T 1yg6_A          174 LSAPEAVEYGLVDSILTH  191 (193)
T ss_dssp             EEHHHHHHHTSSSEECCC
T ss_pred             EcHHHHHHcCCCCEecCC
Confidence            799999999999999864

>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1

Probab=97.22  E-value=0.00064  Score=52.43  Aligned_cols=79  Identities=11%  Similarity=-0.003  Sum_probs=53.3

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH---------------HHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ---------------RLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~---------------~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|..+|..+++++|.  |++.+++.++.....-|......-..               .+.+..|  .....+++-.+.-
T Consensus       150 ~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~  229 (277)
T 1tg6_A          150 QAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRY  229 (277)
T ss_dssp             EEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEE
T ss_pred             EeHHHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcc
Confidence            788899999999999  99999999887655433211100000               1112222  4455566555566


Q ss_pred             CCHHHHHHcCCccccCCc
Q psy9281          95 FTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~~  112 (152)
                      ++++||+++||||++.+.
T Consensus       230 lta~EAle~GLID~I~~~  247 (277)
T 1tg6_A          230 MSPMEAQEFGILDKVLVH  247 (277)
T ss_dssp             ECHHHHHHHTSCSEECSS
T ss_pred             cCHHHHHHCCCCCEecCc
Confidence            799999999999999974

>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1

Probab=97.21  E-value=0.00026  Score=52.15  Aligned_cols=80  Identities=18%  Similarity=0.175  Sum_probs=53.3

Q ss_pred             hhchHHHHHHHHcCe--eEecCCeEEecccccccccCCccHHH-----------------HHHHHhC--HHHHHHHHHcC
Q psy9281          34 IYLGGGCELAMMCDI--IYAGEKAKFGQPEIIIGTMPGAGGTQ-----------------RLTRAAG--KSNAMEICLTG   92 (152)
Q Consensus        34 ~a~G~G~~lal~cD~--ria~~~a~f~~pe~~~G~~p~~~~~~-----------------~l~~~~g--~~~a~~lll~g   92 (152)
                      .|..+|..+++++|.  |++.+++.+......-|. -+ ...-                 .+.+..|  .....+++-..
T Consensus        98 ~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~-~G-~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~  175 (201)
T 3p2l_A           98 LAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF-RG-QASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRD  175 (201)
T ss_dssp             EEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE-EE-EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSC
T ss_pred             EehhHHHHHHHcCccCCEEEcCCCeEEEecccccc-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcC
Confidence            788889999999998  999999998776654332 11 1110                 1122223  44555555444


Q ss_pred             CCCCHHHHHHcCCccccCCc-chH
Q psy9281          93 NQFTAQEAKEMGVVSKIFPP-EKL  115 (152)
Q Consensus        93 ~~~~a~ea~~~Glv~~v~~~-~~l  115 (152)
                      .-++++||+++||||+++++ +++
T Consensus       176 ~~lta~EA~e~GliD~I~~~~~~l  199 (201)
T 3p2l_A          176 NFMMADEAKAYGLIDHVIESREAI  199 (201)
T ss_dssp             EEEEHHHHHHHTSCSEECCCSCC-
T ss_pred             eeecHHHHHHcCCccEecCCHHHh
Confidence            55799999999999999974 444

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=97.19  E-value=6.9e-05  Score=63.41  Aligned_cols=83  Identities=19%  Similarity=0.215  Sum_probs=56.8

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHH-HcCCCCCHHH-----H--HHcC
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEIC-LTGNQFTAQE-----A--KEMG  104 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~ll-l~g~~~~a~e-----a--~~~G  104 (152)
                      +|.|||... ..||++|+.+ ++.+++...++  +-...    -.-.++..+|.+++ .+|+.+++++     .  .+.|
T Consensus       191 ~~~GGga~~-a~~d~vim~e~~a~i~~~GP~v--i~~~~----~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~~~G  263 (587)
T 1pix_A          191 TNPAGGGYH-SISPTVIIAHEKANMAVGGAGI--MGGMN----PKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYTETG  263 (587)
T ss_dssp             EEETHHHHH-HHSSSEEEEETTCEEESCCCTT--CCSCC----SSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTTTSC
T ss_pred             CCcHHHHHH-HhcCceEEecCCcEEEecCHHH--Hhhhc----cccccchhHHHHHHHHhCCccChhhcccHHHHHhhcC
Confidence            899999999 9999998877 48887743321  11000    01126888999999 8899887665     2  3699


Q ss_pred             CccccCCcch-HHHHHHHHH
Q psy9281         105 VVSKIFPPEK-LLEETIKLA  123 (152)
Q Consensus       105 lv~~v~~~~~-l~~~~~~~a  123 (152)
                      ++|.++++++ ..+.+.++.
T Consensus       264 vvD~vv~~e~~a~~~~r~~l  283 (587)
T 1pix_A          264 FMREVYASEEGVLEGIKKYV  283 (587)
T ss_dssp             CSCEEESSHHHHHHHHHHHH
T ss_pred             ceeEecCCHHHHHHHHHHHH
Confidence            9999998765 444444443

>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A

Probab=96.95  E-value=0.0015  Score=48.28  Aligned_cols=80  Identities=14%  Similarity=0.130  Sum_probs=53.1

Q ss_pred             hhchHHHHHHHHcC--eeEecCCeEEecccccccc----cCCccHH----H--------HHHHHhC--HHHHHHHHHcCC
Q psy9281          34 IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGT----MPGAGGT----Q--------RLTRAAG--KSNAMEICLTGN   93 (152)
Q Consensus        34 ~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~----~p~~~~~----~--------~l~~~~g--~~~a~~lll~g~   93 (152)
                      .|.+.|..|++++|  .|++.+++++.+-....|.    ..+..-.    .        .+.+..|  .....+.+-...
T Consensus       106 ~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~m~rd~  185 (205)
T 4gm2_A          106 KAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNVLERDK  185 (205)
T ss_dssp             EEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTTSCE
T ss_pred             eehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCc
Confidence            78888999999999  4999999998765555433    2221000    0        1222222  344555555566


Q ss_pred             CCCHHHHHHcCCccccCCcc
Q psy9281          94 QFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        94 ~~~a~ea~~~Glv~~v~~~~  113 (152)
                      -++|+||+++||||+|++.|
T Consensus       186 ~msa~EA~eyGlID~V~~~e  205 (205)
T 4gm2_A          186 YFNADEAVDFKLIDHILEKE  205 (205)
T ss_dssp             EEEHHHHHHTTSCSEECCC-
T ss_pred             ccCHHHHHHcCCccEeecCC
Confidence            69999999999999998754

>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A

Probab=95.81  E-value=0.02  Score=47.82  Aligned_cols=71  Identities=17%  Similarity=0.181  Sum_probs=53.3

Q ss_pred             hhchHHHHHHHHcCeeEecCC-eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|.|||......||++|++++ +.+++.                    |+...+.  .+|+.++++|.       ...|+
T Consensus       179 ~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~~--~~ge~v~~e~LGGa~~h~~~sGv  236 (530)
T 3iav_A          179 PCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIKT--VTGEDVGFEELGGARTHNSTSGV  236 (530)
T ss_dssp             EEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHHHTSCC
T ss_pred             CcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHHH--HhCCcCChhhcchHHHHHhccCc
Confidence            999999888889999999875 877773                    2221121  56788998876       68999


Q ss_pred             ccccCCcc-hHHHHHHHHHHHH
Q psy9281         106 VSKIFPPE-KLLEETIKLAERI  126 (152)
Q Consensus       106 v~~v~~~~-~l~~~~~~~a~~l  126 (152)
                      ++.++++| +..+.++++..-+
T Consensus       237 ~d~va~de~~a~~~~r~~ls~l  258 (530)
T 3iav_A          237 AHHMAGDEKDAVEYVKQLLSYL  258 (530)
T ss_dssp             CSEEESSHHHHHHHHHHHHHHS
T ss_pred             eeEEecChHHHHHHHHHHHHhc
Confidence            99999865 4666666666655

>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=95.78  E-value=0.022  Score=43.98  Aligned_cols=76  Identities=17%  Similarity=0.097  Sum_probs=48.8

Q ss_pred             hhchHHHHH-HHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCEL-AMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~l-al~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|.||+... ++.+|++++.+++.+++...+       .    ....++...      .-.--+++.+.+.|+||.++++
T Consensus       204 ~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~-------v----i~~~~~~~~------~e~~~~Ae~~~~~G~iD~Iv~~  266 (285)
T 2f9i_B          204 PTTGGVSASFASVGDINLSEPKALIGFAGRR-------V----IEQTINEKL------PDDFQTAEFLLEHGQLDKVVHR  266 (285)
T ss_dssp             EEEHHHHTTGGGCCSEEEECTTCBEESSCHH-------H----HHHHHTSCC------CTTTTBHHHHHHTTCCSEECCG
T ss_pred             CccHHHHHHhhhCCCEEEEeCCcEEEEcCHH-------H----HHHHhcccc------hHhHhhHHHHHhcCCccEEeCh
Confidence            889988554 788999998888877663222       1    122222110      0111247778899999999998


Q ss_pred             chHHHHHHHHHHHH
Q psy9281         113 EKLLEETIKLAERI  126 (152)
Q Consensus       113 ~~l~~~~~~~a~~l  126 (152)
                      +++.+.+.++..-+
T Consensus       267 ~e~r~~l~~~L~~l  280 (285)
T 2f9i_B          267 NDMRQTLSEILKIH  280 (285)
T ss_dssp             GGHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            88777666665543

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=95.72  E-value=0.022  Score=47.63  Aligned_cols=69  Identities=22%  Similarity=0.290  Sum_probs=49.5

Q ss_pred             hhchHHHHHHHHcCeeEecCC-eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|.|||......||++|+.++ +.+++.                    |++..+.  .+|+.+++++.       .+.|+
T Consensus       187 p~~GG~a~s~a~~D~vi~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~E~LGGa~~h~~~sG~  244 (531)
T 3n6r_B          187 PCAGGAVYSPAMTDFIFMVKDSSYMFVT--------------------GPDVVKT--VTNEQVSAEELGGATTHTRKSSV  244 (531)
T ss_dssp             CCBGGGGHHHHHSSEEEEETTTCBCBSS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHHHTTSC
T ss_pred             CcchHHHHHhhhCCEEEEecCCceEeec--------------------CHHHHHH--HhCCccChhhcchHHHHhhccCc
Confidence            999999888888999999985 765551                    1111111  56889999998       89999


Q ss_pred             ccccCCcch-HHHHHHHHHH
Q psy9281         106 VSKIFPPEK-LLEETIKLAE  124 (152)
Q Consensus       106 v~~v~~~~~-l~~~~~~~a~  124 (152)
                      ++.++++|+ ..+.+.++..
T Consensus       245 ~d~v~~~e~~a~~~~r~lls  264 (531)
T 3n6r_B          245 ADAAFENDVEALAEVRRLVD  264 (531)
T ss_dssp             CSEEESSHHHHHHHHHHHHT
T ss_pred             ceEEeCCHHHHHHHHHHHHH
Confidence            999998753 4444444443

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=95.17  E-value=0.03  Score=47.35  Aligned_cols=88  Identities=15%  Similarity=0.042  Sum_probs=55.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccc------------ccc---------CCccHHH-----------HHH----
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIII------------GTM---------PGAGGTQ-----------RLT----   77 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~------------G~~---------p~~~~~~-----------~l~----   77 (152)
                      .+.-+|..|+++||.+++.+++.++......            |+-         -+.+..+           .+.    
T Consensus       129 ~aas~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~  208 (593)
T 3bf0_A          129 NYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIG  208 (593)
T ss_dssp             CEEHHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHH
Confidence            4556779999999999999998887766543            220         0010000           011    


Q ss_pred             -------------HHhCHHHHHHHHHc-------CCCCCHHHHHHcCCccccCCcchHHHHHHH
Q psy9281          78 -------------RAAGKSNAMEICLT-------GNQFTAQEAKEMGVVSKIFPPEKLLEETIK  121 (152)
Q Consensus        78 -------------~~~g~~~a~~lll~-------g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~  121 (152)
                                   |.+......+++-.       +..++++||++.||||++...+++.+...+
T Consensus       209 ~~~~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~~  272 (593)
T 3bf0_A          209 ELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTK  272 (593)
T ss_dssp             HHHHHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence                         11223333344443       688999999999999999976665544433

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=94.29  E-value=0.093  Score=43.80  Aligned_cols=71  Identities=23%  Similarity=0.188  Sum_probs=49.7

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH-----HHH--HcCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ-----EAK--EMGVV  106 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~-----ea~--~~Glv  106 (152)
                      +|.||+......||++|+.+++.+++.                    |++..+.  .+|+.++.+     |.+  +.|++
T Consensus       177 p~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lggae~h~~~~G~v  234 (523)
T 1on3_A          177 PCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELGGAEAHMAISGNI  234 (523)
T ss_dssp             EEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHSHHHHHHTTCCC
T ss_pred             CCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhcccHHHHhhccCce
Confidence            999999999999999999998887775                    2211111  356777754     333  68999


Q ss_pred             cccCCcc-hHHHHHHHHHHHH
Q psy9281         107 SKIFPPE-KLLEETIKLAERI  126 (152)
Q Consensus       107 ~~v~~~~-~l~~~~~~~a~~l  126 (152)
                      +.+++++ +..+.+.++..-+
T Consensus       235 d~vv~d~~~~~~~~r~lL~~l  255 (523)
T 1on3_A          235 HFVAEDDDAAELIAKKLLSFL  255 (523)
T ss_dssp             SEEESSHHHHHHHHHHHHHTS
T ss_pred             EEEeCCHHHHHHHHHHHHHhc
Confidence            9999854 5665555555444

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=93.37  E-value=0.23  Score=41.62  Aligned_cols=71  Identities=14%  Similarity=0.183  Sum_probs=48.2

Q ss_pred             hhchHHHHHHHHcCeeEecCC-eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH-----HHH--HcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ-----EAK--EMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~-----ea~--~~Gl  105 (152)
                      +|.||+......||++|+.++ +.+++.                    |++..+.  .+|+.++.+     |.+  +.|+
T Consensus       190 p~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~e~lggae~h~~~sG~  247 (548)
T 2bzr_A          190 AAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELGGAHTHMAKSGT  247 (548)
T ss_dssp             EEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHHHTSSC
T ss_pred             CCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCChHhcccHHHHhhccCc
Confidence            999999888889999999986 877764                    2211121  356777764     323  6899


Q ss_pred             ccccCCcc-hHHHHHHHHHHHH
Q psy9281         106 VSKIFPPE-KLLEETIKLAERI  126 (152)
Q Consensus       106 v~~v~~~~-~l~~~~~~~a~~l  126 (152)
                      ++.+++++ +..+.+.++..-+
T Consensus       248 ~d~vv~d~~~~~~~~r~lls~l  269 (548)
T 2bzr_A          248 AHYAASGEQDAFDYVRELLSYL  269 (548)
T ss_dssp             CSEEESSHHHHHHHHHHHHTTS
T ss_pred             eeEEeCCHHHHHHHHHHHHHhc
Confidence            99999854 4555555554433

>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B

Probab=93.21  E-value=0.17  Score=42.44  Aligned_cols=69  Identities=23%  Similarity=0.237  Sum_probs=47.4

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|.|||+.....||++++.+ ++.+.+       .    +.. +.+.          .+|+.+++++.       .+.|+
T Consensus       207 ~~~GGga~~~a~~d~vim~e~~a~i~~-------a----GP~-vik~----------~~ge~~~~e~LGGa~~h~~~sGv  264 (555)
T 3u9r_B          207 SCTAGGAYVPAMSDETVMVREQATIFL-------A----GPP-LVKA----------ATGEVVSAEELGGADVHCKVSGV  264 (555)
T ss_dssp             CCBGGGGHHHHTSSEEEEETTTCBCBS-------S----CHH-HHHH----------HHCCCCCHHHHHBHHHHHHTTCS
T ss_pred             CCCccHHHHHHhCCceEEecCCceEEE-------c----cHH-HHHH----------HhcCccChhhccchhhhhhccCc
Confidence            89999999999999988765 454333       1    111 2222          56899999998       78999


Q ss_pred             ccccCCcch-HHHHHHHHHH
Q psy9281         106 VSKIFPPEK-LLEETIKLAE  124 (152)
Q Consensus       106 v~~v~~~~~-l~~~~~~~a~  124 (152)
                      ++.++++|+ -.+.++++..
T Consensus       265 ~d~v~~de~~a~~~~r~~ls  284 (555)
T 3u9r_B          265 ADHYAEDDDHALAIARRCVA  284 (555)
T ss_dssp             CSEEESSHHHHHHHHHHHHH
T ss_pred             eeEEeCCHHHHHHHHHHHHH
Confidence            999998654 2333444433

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=92.74  E-value=0.21  Score=41.70  Aligned_cols=72  Identities=18%  Similarity=0.198  Sum_probs=50.0

Q ss_pred             hhchHHHHHHHHcCeeEecCC-e-EEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH-----HHH--HcC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-A-KFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ-----EAK--EMG  104 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a-~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~-----ea~--~~G  104 (152)
                      +|.||+......||++|+.++ + .+++..           . .+.+.          .+|+.++.+     |.+  +.|
T Consensus       173 p~~GG~a~s~~l~D~~i~~~~~a~~i~~aG-----------P-~vI~~----------~~ge~~~~e~lggae~~~~~~G  230 (522)
T 1x0u_A          173 PAAGGAVYSPALTDFIIMIKGDAYYMFVTG-----------P-EITKV----------VLGEEVSFQDLGGAVVHATKSG  230 (522)
T ss_dssp             EEEGGGGHHHHHSSEEEEECSTTCEEESSC-----------H-HHHHH----------TTCCCCCHHHHHBHHHHHHTTC
T ss_pred             CCchHHHHHHhcCCeEEEecCCccEEEecC-----------H-HHHHH----------HhCCcCChhhcchHHHHhhcCc
Confidence            999999988999999999987 7 666511           1 12222          457777764     323  689


Q ss_pred             CccccCCc-chHHHHHHHHHHHHh
Q psy9281         105 VVSKIFPP-EKLLEETIKLAERIG  127 (152)
Q Consensus       105 lv~~v~~~-~~l~~~~~~~a~~l~  127 (152)
                      +++.++++ .+..+.+.++..-+-
T Consensus       231 ~~d~vv~~~~~~~~~~~~ll~~lp  254 (522)
T 1x0u_A          231 VVHFMVDSEQEAINLTKRLLSYLP  254 (522)
T ss_dssp             CCSEEESCHHHHHHHHHHHHHHSC
T ss_pred             eeEEEeCCHHHHHHHHHHHHHhcc
Confidence            99999985 456666666665553

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=91.09  E-value=0.49  Score=39.45  Aligned_cols=69  Identities=16%  Similarity=0.201  Sum_probs=45.0

Q ss_pred             hhchHHHHHHHHcCeeEecCC-eEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHH-----HHH--HcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEK-AKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ-----EAK--EMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~-a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~-----ea~--~~Gl  105 (152)
                      +|.|||......||++|+.++ +.+++       .-    .. +.+.          .+|+.++.+     |.+  +.|+
T Consensus       180 p~~GG~a~s~al~D~vi~~~~~a~i~~-------aG----P~-vi~~----------~~ge~v~~e~lggae~~~~~~G~  237 (527)
T 1vrg_A          180 PCAGGAVYSPALTDFIVMVDQTARMFI-------TG----PN-VIKA----------VTGEEISQEDLGGAMVHNQKSGN  237 (527)
T ss_dssp             EEBGGGGHHHHHSSEEEEETTTCBCBS-------SC----HH-HHHH----------HHCCCCCHHHHHBHHHHHHTSCC
T ss_pred             CCchHHHHHHHcCCeEEEecCceEEEe-------cC----HH-HHHH----------HhCCCCCccccccHHHHhhcccc
Confidence            999999888889999999987 66443       11    11 1111          346677653     323  6899


Q ss_pred             ccccCCcc-hHHHHHHHHHH
Q psy9281         106 VSKIFPPE-KLLEETIKLAE  124 (152)
Q Consensus       106 v~~v~~~~-~l~~~~~~~a~  124 (152)
                      ++.+++++ +..+.+.++..
T Consensus       238 vd~vv~d~~~~~~~~~~~Ls  257 (527)
T 1vrg_A          238 AHFLADNDEKAMSLVRTLLS  257 (527)
T ss_dssp             CSEEESSHHHHHHHHHHHHT
T ss_pred             eEEEecCHHHHHHHHHHHHH
Confidence            99999854 45554444443

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=90.69  E-value=0.93  Score=37.76  Aligned_cols=87  Identities=17%  Similarity=0.158  Sum_probs=51.0

Q ss_pred             hhchHHHHHHHH----cCeeEecCCeEEecccccccccCCccHHHHHHHH-hCH----HHH-HHHHH--cCCCCCHHHHH
Q psy9281          34 IYLGGGCELAMM----CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRA-AGK----SNA-MEICL--TGNQFTAQEAK  101 (152)
Q Consensus        34 ~a~G~G~~lal~----cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~-~g~----~~a-~~lll--~g~~~~a~ea~  101 (152)
                      .+.|||......    +|+++|.+++.+++-..+       +++..+-+. +-.    ... .++.-  .-.--++..+.
T Consensus       408 ~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~gpe-------gaa~Il~r~~i~~~~d~~~~~~~l~~~y~~~~~~~~~~~  480 (522)
T 1x0u_A          408 KSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGPE-------GAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAA  480 (522)
T ss_dssp             EEEHHHHHHTCCGGGTCSEEEECTTCEEESSCHH-------HHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSSHHHH
T ss_pred             CcccHHHHHhcccccCCCEEEEeCCCEEEecCHH-------HHHHHHhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHH
Confidence            888888655544    999988888776653322       222212111 100    000 01110  00124567799


Q ss_pred             HcCCccccCCcchHHHHHHHHHHHHh
Q psy9281         102 EMGVVSKIFPPEKLLEETIKLAERIG  127 (152)
Q Consensus       102 ~~Glv~~v~~~~~l~~~~~~~a~~l~  127 (152)
                      +.|+||.|+++.++.+......+.+.
T Consensus       481 ~~G~iD~II~p~~tR~~L~~~L~~~~  506 (522)
T 1x0u_A          481 EKGLVDDVIEPKDTRRVIVAGLEMLK  506 (522)
T ss_dssp             HTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred             hcCCCcEeECHHHHHHHHHHHHHHHh
Confidence            99999999999888877766666654

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=89.48  E-value=0.58  Score=39.04  Aligned_cols=88  Identities=14%  Similarity=0.118  Sum_probs=50.7

Q ss_pred             hhchHHHHHHHH----cCeeEecCCeEEecccccccccCCccHHHHHHHH-h----CHHHHHH-HHH--cCCCCCHHHHH
Q psy9281          34 IYLGGGCELAMM----CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRA-A----GKSNAME-ICL--TGNQFTAQEAK  101 (152)
Q Consensus        34 ~a~G~G~~lal~----cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~-~----g~~~a~~-lll--~g~~~~a~ea~  101 (152)
                      .+.|||..-+..    .|+++|.+++.+       ++..+.+++..+-+. +    .+...++ +.-  .-+.-++..+.
T Consensus       413 ~~~gGg~~am~~~~~~~d~~~a~p~a~~-------~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~~  485 (527)
T 1vrg_A          413 KAYGGAYIAMGSKHLGADMVLAWPSAEI-------AVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAA  485 (527)
T ss_dssp             EEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHH
T ss_pred             CcccHHHHHhcCCCCCCCEEEEcCCCeE-------EecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHH
Confidence            777777543333    788776666555       444444443323221 1    1111111 221  11136778899


Q ss_pred             HcCCccccCCcchHHHHHHHHHHHHhc
Q psy9281         102 EMGVVSKIFPPEKLLEETIKLAERIGE  128 (152)
Q Consensus       102 ~~Glv~~v~~~~~l~~~~~~~a~~l~~  128 (152)
                      +.|+||+|+++.++.+......+.+..
T Consensus       486 ~~g~iD~II~p~~tR~~l~~~L~~l~~  512 (527)
T 1vrg_A          486 SRGYVDMVIDPRETRKYIMRALEVCET  512 (527)
T ss_dssp             HTTSSSEECCGGGHHHHHHHHHHHHTT
T ss_pred             HcCCCCeeeCHHHHHHHHHHHHHHHhc
Confidence            999999999988887766666666543

>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A

Probab=88.60  E-value=1.1  Score=38.94  Aligned_cols=69  Identities=10%  Similarity=0.018  Sum_probs=43.4

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCC--CHHHH------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF--TAQEA------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~--~a~ea------~~~Gl  105 (152)
                      +|+|||+.+...||++|+++++.+.+       .-    ...+..           .+|+.+  +.+|.      .+.|.
T Consensus       256 ~c~GGgAY~paL~D~vImv~~s~ifl-------tG----P~vIk~-----------~tGeeV~~s~eeLGGA~vh~~sGv  313 (758)
T 3k8x_A          256 RSVGIGAYLVRLGQRAIQVEGQPIIL-------TG----APAINK-----------MLGREVYTSNLQLGGTQIMYNNGV  313 (758)
T ss_dssp             CEETHHHHHHHHTCEEEEETTCCEES-------SC----HHHHHH-----------HHTSCCCSCTHHHHSHHHHTTTTS
T ss_pred             CCchHHHHHHhhCCEEEEECCceEEE-------eC----HHHHHH-----------HhCCccccCchhcchhhHHHhcCC
Confidence            89999999999999999999864332       11    111111           255655  44432      36899


Q ss_pred             ccccCCcchHHHHHHHHHHHHh
Q psy9281         106 VSKIFPPEKLLEETIKLAERIG  127 (152)
Q Consensus       106 v~~v~~~~~l~~~~~~~a~~l~  127 (152)
                      ++.++++|.   .+.+.++++.
T Consensus       314 ad~va~dd~---eal~~ir~lL  332 (758)
T 3k8x_A          314 SHLTAVDDL---AGVEKIVEWM  332 (758)
T ss_dssp             SSEEESSHH---HHHHHHHHHH
T ss_pred             eeEEecCHH---HHHHHHHHHH
Confidence            999997653   3334444443

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=85.57  E-value=1.8  Score=36.62  Aligned_cols=37  Identities=16%  Similarity=0.196  Sum_probs=31.0

Q ss_pred             CCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCC
Q psy9281          94 QFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHS  130 (152)
Q Consensus        94 ~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~  130 (152)
                      ..++..+.+.|+||.|+++.++........+.+...|
T Consensus       527 ~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~  563 (587)
T 1pix_A          527 KSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP  563 (587)
T ss_dssp             TTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred             hCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999888887777777776655

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=84.91  E-value=1.1  Score=37.24  Aligned_cols=87  Identities=20%  Similarity=0.158  Sum_probs=49.2

Q ss_pred             hhchHHHHHHHH----cCeeEecCCeEEecccccccccCCccHHHHHHHH-hC----HHHHH-HHHH--cCCCCCHHHHH
Q psy9281          34 IYLGGGCELAMM----CDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRA-AG----KSNAM-EICL--TGNQFTAQEAK  101 (152)
Q Consensus        34 ~a~G~G~~lal~----cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~-~g----~~~a~-~lll--~g~~~~a~ea~  101 (152)
                      .+.|||..-+..    +|+++|.+++.       +++..+.+++..+-+. +-    ....+ ++.-  .-+.-++..+.
T Consensus       409 ~~~Ggg~~am~~~~~~~d~~~a~p~a~-------~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~a  481 (523)
T 1on3_A          409 KAYGGSYLAMCNRDLGADAVYAWPSAE-------IAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAA  481 (523)
T ss_dssp             EEEHHHHHTTTCGGGTCSEEEECTTCE-------EESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHH
T ss_pred             CcccHHHHHhcccCCCCCEEEEcCCCe-------EEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHH
Confidence            677777544433    67776665554       4554444444333222 11    11111 1221  11125678899


Q ss_pred             HcCCccccCCcchHHHHHHHHHHHHh
Q psy9281         102 EMGVVSKIFPPEKLLEETIKLAERIG  127 (152)
Q Consensus       102 ~~Glv~~v~~~~~l~~~~~~~a~~l~  127 (152)
                      +.|+||.|+++.++.+......+.+.
T Consensus       482 ~~g~iD~II~p~~tR~~l~~~L~~l~  507 (523)
T 1on3_A          482 ARGQVDDVIDPADTRRKIASALEMYA  507 (523)
T ss_dssp             HTTSSSEECCGGGHHHHHHHHHHHGG
T ss_pred             hcCCCCEeeCHHHHHHHHHHHHHHHh
Confidence            99999999998887776666665554

>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*

Probab=83.43  E-value=1.7  Score=37.93  Aligned_cols=26  Identities=19%  Similarity=0.098  Sum_probs=23.1

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEec
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQ   59 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~   59 (152)
                      +|.|||+.++..||++|+.+++.+.+
T Consensus       269 ~~~GGgAy~~~lgD~vI~~~~a~i~l  294 (793)
T 2x24_A          269 RALGIGAYLVRLGQRVIQVENSHIIL  294 (793)
T ss_dssp             EEETHHHHHHHHTCCEEEETTCEEES
T ss_pred             CCchHHHHHHhhCCeEEEeccccEEe
Confidence            89999999999999999999876554

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*

Probab=80.28  E-value=3.9  Score=34.56  Aligned_cols=89  Identities=16%  Similarity=0.113  Sum_probs=49.9

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccc--cccCCccHHHHHHHH---hCHHHHHHHHHcCCCCCHHHHH--HcCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIII--GTMPGAGGTQRLTRA---AGKSNAMEICLTGNQFTAQEAK--EMGVV  106 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~--G~~p~~~~~~~l~~~---~g~~~a~~lll~g~~~~a~ea~--~~Glv  106 (152)
                      +|.|||...++++|++++.+++.+.+...++  |+.|.  +.. .+.-   +......+-..+.+.+.+.+.+  ..|.+
T Consensus       192 p~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~--g~~-~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~sGv~  268 (588)
T 3gf3_A          192 TNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPK--GYI-DDEAAEQIIAAQIENSKLKVPAPGSVPIHYDETGFF  268 (588)
T ss_dssp             EEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTSCCS
T ss_pred             CCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCcc--ccc-cccchhhhhhhhccccccChhhccchhhhccccccc
Confidence            8888887668888888888888888765542  11110  000 1110   0011111222466677777777  58999


Q ss_pred             cccCCcch-HHHHHHHHHHH
Q psy9281         107 SKIFPPEK-LLEETIKLAER  125 (152)
Q Consensus       107 ~~v~~~~~-l~~~~~~~a~~  125 (152)
                      +.++++|+ ..+.++++..-
T Consensus       269 d~~a~de~~al~~~r~~ls~  288 (588)
T 3gf3_A          269 REVYQNDLGVIDGIKKYISY  288 (588)
T ss_dssp             CEEESSHHHHHHHHHHHHHT
T ss_pred             eEEeCCHHHHHHHHHHHHHh
Confidence            99998653 44445444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1mj3a_	260	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat	3e-27
d1szoa_	249	c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus	2e-09
d1hzda_	266	c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T	3e-09
d2f6qa1	245	c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C	3e-09
d1uiya_	253	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The	5e-09
d1pjha_	266	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	1e-07
d1wdka4	310	c.14.1.3 (A:1-310) Fatty oxidation complex alpha s	7e-07
d2a7ka1	230	c.14.1.3 (A:1-230) Carbapenem biosynthes protein C	3e-06
d1sg4a1	249	c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-d	0.001

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  100 bits (249), Expect = 3e-27
 Identities = 75/107 (70%), Positives = 92/107 (85%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           LGGGCELAMMCDIIYAGEKA+FGQPEI++GT+PGAGGTQRLTRA GKS AME+ LTG++ 
Sbjct: 109 LGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRI 168

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
           +AQ+AK+ G+VSKIFP E L+EE I+ AE+I  +S +IV   KE+VN
Sbjct: 169 SAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVN 215

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

 Score = 52.0 bits (123), Expect = 2e-09
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 1/143 (0%)

Query: 1   MFHFEKLFILIDYEQKDLYRSKNLKFIQCLKIWIYLGGGCELAMMCDIIYAGEKAKF-GQ 59
           +        +I   Q+ L    +++      +   +    E+ +M DI+ A E A F   
Sbjct: 81  LGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVTNAPEIPVMSDIVLAAESATFQDG 140

Query: 60  PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEET 119
           P    G +PG G         G +      LTG +  A+ A + G V+++   ++LL   
Sbjct: 141 PHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRA 200

Query: 120 IKLAERIGEHSPLIVTQVKEAVN 142
            +LA  I E   L     ++ + 
Sbjct: 201 WELARGIAEKPLLARRYARKVLT 223

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (123), Expect = 3e-09
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 4/108 (3%)

Query: 39  GCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQ 98
           G ELA+ CDI  A   AK G  E  +  +PG GGTQRL RA G S A E+  +      +
Sbjct: 114 GLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGK 173

Query: 99  EAKEMGVVSKIFPPEKLLEETIKLA----ERIGEHSPLIVTQVKEAVN 142
           EAK +G++S +    +  +   + A           P+ +   K A+N
Sbjct: 174 EAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAIN 221

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (122), Expect = 3e-09
 Identities = 26/111 (23%), Positives = 48/111 (43%)

Query: 40  CELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQE 99
             L  + D +YA ++A F  P   +G  P    +    +    + A E+ + G + TA E
Sbjct: 114 VTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGE 173

Query: 100 AKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN 150
           A   G+V+++FP     +E     +   +  P  +   KE +   + E L+
Sbjct: 174 ACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLH 224

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

 Score = 50.9 bits (120), Expect = 5e-09
 Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 36  LGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF 95
           + GG  LA+ CD++   E+A+ G  E+ IG +     +  L RA G+  A ++ LTG   
Sbjct: 106 VAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGEKAAKDLLLTGRLV 164

Query: 96  TAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGL 149
            A+EAK +G+V++I PP K LEE   LAE + +++P  +   KE +      GL
Sbjct: 165 EAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGL 218

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (111), Expect = 1e-07
 Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 6/72 (8%)

Query: 86  MEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETI------KLAERIGEHSPLIVTQVKE 139
            E  +    F      E G +SK F       E        +L E++          +K+
Sbjct: 171 YECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKK 230

Query: 140 AVNIDDTEGLNH 151
            +  +  +  N 
Sbjct: 231 LLKSNHIDAFNK 242

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

 Score = 45.1 bits (105), Expect = 7e-07
 Identities = 30/89 (33%), Positives = 46/89 (51%)

Query: 38  GGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTA 97
           GG E+ +  D     + AK G PE+ +G  PG GGT RL R  G  NA+E   +G +  A
Sbjct: 117 GGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRA 176

Query: 98  QEAKEMGVVSKIFPPEKLLEETIKLAERI 126
           ++A ++  V  +   +KL    + L +R 
Sbjct: 177 EDALKVSAVDAVVTADKLGAAALDLIKRA 205

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

 Score = 43.3 bits (100), Expect = 3e-06
 Identities = 12/57 (21%), Positives = 20/57 (35%)

Query: 86  MEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN 142
            EI        A    +  +V+++     LL+  I  A  +  +        K AVN
Sbjct: 155 QEIIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRAVN 211

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 35.6 bits (80), Expect = 0.001
 Identities = 10/64 (15%), Positives = 20/64 (31%)

Query: 86  MEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNIDD 145
                 G  F   EA ++G+V ++ P E++    +    +            K  +    
Sbjct: 160 ERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKAT 219

Query: 146 TEGL 149
              L
Sbjct: 220 ASRL 223

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d2a7ka1	230	Carbapenem biosynthes protein CarB {Pectobacterium	100.0
d2f6qa1	245	Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (	100.0
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	100.0
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	99.98
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	99.97
d1sg4a1	249	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.97
d1ef8a_	261	Methylmalonyl CoA decarboxylase {Escherichia coli	99.97
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	99.97
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1szoa_	249	6-oxo camphor hydrolase {Rhodococcus erythropolis	99.96
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	99.96
d1wdka4	310	Fatty oxidation complex alpha subunit, N-terminal	99.96
d1pjha_	266	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.96
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	99.96
d1q52a_	297	Naphthoate synthase MenB {Mycobacterium tuberculos	99.95
d2cbya1	179	Clp protease, ClpP subunit {Mycobacterium tubercul	97.37
d1y7oa1	192	Clp protease, ClpP subunit {Streptococcus pneumoni	97.27
d2f6ia1	190	Clp protease, ClpP subunit {Plasmodium falciparum	97.27
d1tg6a1	193	Clp protease, ClpP subunit {Human (Homo sapiens),	97.23
d1yg6a1	183	Clp protease, ClpP subunit {Escherichia coli [TaxI	97.06
d1on3a1	253	Methylmalonyl-CoA carboxyltransferase (transcarbox	95.52
d2a7sa1	258	Propionyl-CoA carboxylase complex B subunit, PccB	95.0
d2f9ya1	316	Acetyl-coenzyme A carboxylase carboxyl transferase	94.93
d1xnya1	258	Propionyl-CoA carboxylase complex B subunit, PccB	94.57
d1vrga1	251	Propionyl-CoA carboxylase complex B subunit, PccB	94.5
d2f9yb1	263	Acetyl-coenzyme A carboxylase carboxyl transferase	94.24
d1pixa2	287	Glutaconyl-CoA decarboxylase A subunit {Acidaminoc	91.68
d1uyra1	333	Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc	87.66

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

Probab=100.00  E-value=4.4e-34  Score=215.23  Aligned_cols=140  Identities=23%  Similarity=0.232  Sum_probs=124.3

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh-----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC-----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQP   60 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~-----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~p   60 (152)
                      +|+||    +|.|++++......+.           +..+             +|+|||++|+++||+||++++++|++|
T Consensus        55 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~p  130 (230)
T d2a7ka1          55 ERSFS----AGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMP  130 (230)
T ss_dssp             TSCSB----CBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECC
T ss_pred             hhhhh----hhcccccccccccccccccchhhhhhhhhcccchhcceeeecccccccccccchhccchhhccccchhhhc
Confidence            57999    9999999866433221           1111             999999999999999999999999999


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.++ .+|++++|++++++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+.
T Consensus       131 e~~~G~~p~~g~-~~l~~~iG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~  209 (230)
T d2a7ka1         131 ELKHGIGCSVGA-AILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRA  209 (230)
T ss_dssp             GGGGTCCCHHHH-HHHHHHHCHHHHHHHHHHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             cccccccccccc-cccccccccccccccccccccchHHHHHHhhhcccCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            999999988775 5699999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccccCCC
Q psy9281         141 VNIDDTEGL  149 (152)
Q Consensus       141 l~~~~~~~l  149 (152)
                      +++.+...+
T Consensus       210 l~~~~~~~l  218 (230)
T d2a7ka1         210 VNKPFIHLL  218 (230)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHhccH
Confidence            988765544

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-33  Score=214.54  Aligned_cols=141  Identities=21%  Similarity=0.315  Sum_probs=123.3

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------------hhhh-------------hhchHHHHHHHHcCeeEecCCeEE
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKF   57 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f   57 (152)
                      .++||    +|+||+++........              +..+             +|+|||++|+++||+||++++++|
T Consensus        56 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa~v~G~a~GgG~~la~~~D~~ia~~~a~f  131 (245)
T d2f6qa1          56 GDYYS----SGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATF  131 (245)
T ss_dssp             TTCSB----CCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEE
T ss_pred             Ccccc----CCccchhhhcccccccccccchhhhHHHHHHhhhhhcCCceEEEECCccccccccchhhhhhhhhhccCeE
Confidence            46899    9999999865432111              1111             999999999999999999999999


Q ss_pred             ecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHH
Q psy9281          58 GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus        58 ~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                      ++||+++|++|+++++++|++++|+.++++++++|++++++||+++||||+++|++++++++.++++++++.||.+++.+
T Consensus       132 ~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~  211 (245)
T d2f6qa1         132 HTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRIS  211 (245)
T ss_dssp             ECCTGGGTCCCCTTHHHHHHHHHCHHHHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred             ecccccCCCCccccchhhcccccccchhhhhcccccccccccccccccccccCCcchHHHHHHHHHHHHHcCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCC
Q psy9281         138 KEAVNIDDTEGL  149 (152)
Q Consensus       138 K~~l~~~~~~~l  149 (152)
                      |+.+++...+.+
T Consensus       212 K~~l~~~~~~~l  223 (245)
T d2f6qa1         212 KEVIRKREREKL  223 (245)
T ss_dssp             HHHHHGGGHHHH
T ss_pred             HHHHHhhhhcCH
Confidence            999988765443

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.8e-33  Score=212.06  Aligned_cols=142  Identities=58%  Similarity=0.902  Sum_probs=129.2

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEII   63 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~~   63 (152)
                      .++||    +|+|++++........        +..+             +|+|||++|+++||+||++++++|++||++
T Consensus        61 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~  136 (260)
T d1mj3a_          61 EKAFA----AGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEIL  136 (260)
T ss_dssp             SSEEE----CCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGG
T ss_pred             ccccc----ccchhhhhhccchhhhhHHHHHHHHHHhccCCCeEEEEEcCeEeHHHHHHHHHCCEEEEcCCCEEECchhc
Confidence            57899    9999999865433321        1111             999999999999999999999999999999


Q ss_pred             ccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHhc
Q psy9281          64 IGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVNI  143 (152)
Q Consensus        64 ~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~  143 (152)
                      +|++|+++++++|++++|++++++++++|++++++||+++|||+++++++++.+.+.+++++++..+|.+++.+|+.++.
T Consensus       137 ~Gl~p~~~~~~~l~~~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~a~~i~~~~~~a~~~~K~~l~~  216 (260)
T d1mj3a_         137 LGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNA  216 (260)
T ss_dssp             GTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHHG
T ss_pred             cCcCCcccHHHHHHHHhCHHHHHHHHHcCcccCchhhccCCCceeeecccccccccccccccccchhhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCC
Q psy9281         144 DDTEGLN  150 (152)
Q Consensus       144 ~~~~~l~  150 (152)
                      ....+++
T Consensus       217 ~~~~~l~  223 (260)
T d1mj3a_         217 AFEMTLT  223 (260)
T ss_dssp             GGSSCHH
T ss_pred             HHhCCHH
Confidence            8776654

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.9e-33  Score=213.16  Aligned_cols=141  Identities=22%  Similarity=0.341  Sum_probs=126.3

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh--------------hhhh-------------hhchHHHHHHHHcCeeEecCCeEE
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC--------------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKF   57 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~--------------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f   57 (152)
                      .|.||    +|+||+++......+.              +..+             +|+|||++++++||+||++++++|
T Consensus        56 g~~Fs----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f  131 (258)
T d2fw2a1          56 GSVFC----CGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWF  131 (258)
T ss_dssp             SSCSB----CCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEE
T ss_pred             ccccc----cccccchhhhcccccccchhhHHHHHHHHHHHhhhccceeeeeecccccccccccccccccccceecccce
Confidence            37899    9999999854322211              1111             999999999999999999999999


Q ss_pred             ecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHH
Q psy9281          58 GQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus        58 ~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                      ++||+++|++|++++++++++++|.+++++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+
T Consensus       132 ~~pe~~~Gl~p~~g~~~~l~r~ig~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~  211 (258)
T d2fw2a1         132 QTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEEC  211 (258)
T ss_dssp             ECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSCSEEECSTTHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred             eeccccccccccccccccchhhcCccccchhhccCcccccccccccccccccccccccccccchhhhhhhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCC
Q psy9281         138 KEAVNIDDTEGL  149 (152)
Q Consensus       138 K~~l~~~~~~~l  149 (152)
                      |+.++.....++
T Consensus       212 K~~~~~~~~~~l  223 (258)
T d2fw2a1         212 KALVRCNIKLEL  223 (258)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHhhcCCH
Confidence            999987665443

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.6e-32  Score=210.22  Aligned_cols=139  Identities=19%  Similarity=0.251  Sum_probs=125.1

Q ss_pred             cccccCCCCCCcchhhhhhhchhh-h-----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEec
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQ-C-----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQ   59 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~-~-----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~   59 (152)
                      .|+||    +|+||+++....... .           +..+             +|+|||++|+++||+||++++++|++
T Consensus        63 g~~Fs----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~  138 (263)
T d1wz8a1          63 GGVFS----AGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLD  138 (263)
T ss_dssp             GGCCB----CCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEEC
T ss_pred             ccccc----ccchhhhhhhhcccccccccchhhhhHHHHHhhhhhcceeeeccccccccccccccccccccccccccccc
Confidence            37899    999999986532111 1           0111             89999999999999999999999999


Q ss_pred             ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281          60 PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus        60 pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      ||+++|++|+.++++++++++|..++++++++|++++++||+++||||+++|++++.+++.+++++++..||.+++.+|+
T Consensus       139 pe~~~Gl~p~~~~~~~l~~~~G~~~a~~l~l~g~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~al~~~K~  218 (263)
T d1wz8a1         139 GHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALHHTKH  218 (263)
T ss_dssp             CHHHHTSCCTTTHHHHTHHHHCHHHHHHHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             cccccccccccccccccccccccchhhhhcccccccchhHHHhcCCcccccchhhhhHHHHHHHHHhhccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccC
Q psy9281         140 AVNIDDTE  147 (152)
Q Consensus       140 ~l~~~~~~  147 (152)
                      .+++....
T Consensus       219 ~l~~~~~~  226 (263)
T d1wz8a1         219 ALNHWYRS  226 (263)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhC
Confidence            99876544

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.97  E-value=2.1e-32  Score=208.13  Aligned_cols=140  Identities=18%  Similarity=0.233  Sum_probs=124.8

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh---hh-------hh-------------hhchHHHHHHHHcCeeEecCCeEE--ec
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC---LK-------IW-------------IYLGGGCELAMMCDIIYAGEKAKF--GQ   59 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~---~~-------~~-------------~a~G~G~~lal~cD~ria~~~a~f--~~   59 (152)
                      +++||    +|+|++++.+......   ..       .+             +|+|+|++|+++||+||++++++|  ++
T Consensus        58 ~~~Fs----~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~~~  133 (249)
T d1sg4a1          58 PGVFS----AGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGL  133 (249)
T ss_dssp             TEESC----CEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSC
T ss_pred             ceeEe----cccccccccccccccccccchhhHHHHHhhhcCccccchhhcccccccccccccccccceeeccccccccc
Confidence            46899    9999999865433222   11       11             999999999999999999999876  78


Q ss_pred             ccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHH
Q psy9281          60 PEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKE  139 (152)
Q Consensus        60 pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~  139 (152)
                      ||+++|+.|+.+++++|++++|++++++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+
T Consensus       134 pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g~~~~a~~A~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~  213 (249)
T d1sg4a1         134 NETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKA  213 (249)
T ss_dssp             CGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccHHHHHhhccccccCChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccCC
Q psy9281         140 AVNIDDTEG  148 (152)
Q Consensus       140 ~l~~~~~~~  148 (152)
                      .+++.....
T Consensus       214 ~~~~~~~~~  222 (249)
T d1sg4a1         214 MMRKATASR  222 (249)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhCC
Confidence            998765443

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=3.1e-32  Score=208.31  Aligned_cols=140  Identities=25%  Similarity=0.351  Sum_probs=123.9

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh---------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEecccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC---------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPEI   62 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~---------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe~   62 (152)
                      +|+||    +|+||+++.+......         +..+             +|+|||++|+++||+||++++++|++||+
T Consensus        59 ~~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~~~~pe~  134 (261)
T d1ef8a_          59 SKVFS----AGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPV  134 (261)
T ss_dssp             CSEEE----CCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHH
T ss_pred             chhhc----ccccccccccCCccccccccchhhhHHHHHhCchhhhhcccccccchhhhhhhhhhhhhhhHhHHHhhhhc
Confidence            57899    9999999865432211         1111             99999999999999999999999999999


Q ss_pred             cccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q psy9281          63 IIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEAVN  142 (152)
Q Consensus        63 ~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~  142 (152)
                      ++|++|+.++++++++.+|..++++++++|++++++||+++||||+++|++++.+.+.+++++++..||.+++.+|+.++
T Consensus       135 ~~Gl~~~~~~~~~l~r~~g~~~a~~~~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~la~~~~~a~~~~K~~l~  214 (261)
T d1ef8a_         135 NLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELR  214 (261)
T ss_dssp             HHTCCCCHHHHHTTSSSSCHHHHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCccccccccccCceEcHHHHHHcCCcceeeechhhhhhhHHHHHHHHhcCcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCC
Q psy9281         143 IDDTEG  148 (152)
Q Consensus       143 ~~~~~~  148 (152)
                      ...+..
T Consensus       215 ~~~~~~  220 (261)
T d1ef8a_         215 VLGEAH  220 (261)
T ss_dssp             HHHHCC
T ss_pred             HHHhcC
Confidence            765543

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=99.97  E-value=1e-31  Score=206.19  Aligned_cols=117  Identities=25%  Similarity=0.383  Sum_probs=113.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPE  113 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~  113 (152)
                      +|+|||++|+++||+||++++++|++||.++|+.|++++++++++++|..++++++++|++++++||+++||||+++|++
T Consensus       110 ~a~GgG~~lal~~D~ria~~~a~~~~~~~~~g~~~~~g~~~~l~~~ig~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~  189 (269)
T d1nzya_         110 VAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD  189 (269)
T ss_dssp             EEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHHHHHHCCCBCHHHHHHHTSCSCEECHH
T ss_pred             hcCCCceeeeecccHhhhhhhhhhcccccccccccccccccccccccChhhhhhccccccccchhHHHHcCCcccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         114 KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       114 ~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      ++.+++.++++++++.||.+++.+|+.+++....+++
T Consensus       190 ~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~  226 (269)
T d1nzya_         190 EFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVE  226 (269)
T ss_dssp             HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHH
T ss_pred             ccccchhhhhhhhhhhhHHHHHHHHHHHHHHHcCCHH
Confidence            9999999999999999999999999999988776654

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-31  Score=204.41  Aligned_cols=142  Identities=31%  Similarity=0.473  Sum_probs=123.8

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEeccc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFGQPE   61 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~~pe   61 (152)
                      +++||    +|.|++.+........          ...+             +|+|||++|+++||+||++++++|++||
T Consensus        61 ~~~f~----~g~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe  136 (266)
T d1hzda_          61 PGIFC----AGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE  136 (266)
T ss_dssp             TEEEE----CCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCG
T ss_pred             ccccc----ccccccccccccchhhhhhhhHHHHHHHHHhcCCcccccccccccccccceeccccceeeecCCcEEeecc
Confidence            57899    9999998865443321          1111             9999999999999999999999999999


Q ss_pred             ccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchH----HHHHHHHHHHHhcCCHHHHHHH
Q psy9281          62 IIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKL----LEETIKLAERIGEHSPLIVTQV  137 (152)
Q Consensus        62 ~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l----~~~~~~~a~~l~~~~~~a~~~~  137 (152)
                      +++|++|+++++++|++++|++++++++++|++++++||+++||||+++|++++    .+.+.+++++++..||.+++.+
T Consensus       137 ~~~G~~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~~~~~a~~~a~~i~~~~p~a~~~~  216 (266)
T d1hzda_         137 TKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVA  216 (266)
T ss_dssp             GGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHHHH
T ss_pred             cceeecCCccceeeehhhhHHHHHHhhhccCCccCHHHhhcccccccccChhhhhhHHHHHHHHHHHhcccCChHHHHHH
Confidence            999999999999999999999999999999999999999999999999997664    5566667788888999999999


Q ss_pred             HHHHhccccCCCC
Q psy9281         138 KEAVNIDDTEGLN  150 (152)
Q Consensus       138 K~~l~~~~~~~l~  150 (152)
                      |+.+++....+++
T Consensus       217 K~~l~~~~~~~~~  229 (266)
T d1hzda_         217 KLAINQGMEVDLV  229 (266)
T ss_dssp             HHHHHHHHTSCHH
T ss_pred             HHHHHHHhcCCHH
Confidence            9999987766554

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=99.96  E-value=7.7e-31  Score=199.49  Aligned_cols=139  Identities=22%  Similarity=0.286  Sum_probs=122.2

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh----------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEe-cc
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC----------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFG-QP   60 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~----------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~-~p   60 (152)
                      .+.||    +|+||+++.+....+.          +..+             +| |||++|+++||+||++++++|. +|
T Consensus        67 g~~Fs----aG~Dl~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~pvIa~v~g~~-~GG~~l~l~~D~ria~~~a~f~~~p  141 (249)
T d1szoa_          67 GPSFC----NEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPV-TNAPEIPVMSDIVLAAESATFQDGP  141 (249)
T ss_dssp             TTBSB----CEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCB-CSSTHHHHTSSEEEEETTCEEECTT
T ss_pred             ccccc----ccchhhhhhcccccchhhhhhhhhhhhhhcccCcccceeeecccc-ccccccccccccccccCCcEEEEee
Confidence            46899    9999999865433322          1111             55 5577999999999999999985 79


Q ss_pred             cccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHHHH
Q psy9281          61 EIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVKEA  140 (152)
Q Consensus        61 e~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~  140 (152)
                      |+++|++|+.++++++++++|+.++++++++|++++++||+++||||+++|++++.+++.++++++++.||.+++.+|+.
T Consensus       142 e~~~g~~p~~g~~~~l~r~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~  221 (249)
T d1szoa_         142 HFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKV  221 (249)
T ss_dssp             SGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCccceeeecccCCCCCHHHHHHhCCcCcccCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccccCC
Q psy9281         141 VNIDDTEG  148 (152)
Q Consensus       141 l~~~~~~~  148 (152)
                      +++.....
T Consensus       222 l~~~~~~~  229 (249)
T d1szoa_         222 LTRQLRRV  229 (249)
T ss_dssp             HSHHHHHH
T ss_pred             HHHHHhcc
Confidence            98765543

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2.5e-30  Score=196.12  Aligned_cols=141  Identities=32%  Similarity=0.452  Sum_probs=124.0

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh-------------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEe
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC-------------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFG   58 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~-------------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~   58 (152)
                      .+.||    +|+|++++........             ...+             +|+|||++|+++||+||++++++|+
T Consensus        53 g~~f~----aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~ria~~~a~~~  128 (253)
T d1uiya_          53 GKAFS----AGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLG  128 (253)
T ss_dssp             SSCSB----CCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEE
T ss_pred             ccccc----ccchhHHhhhccccCcccccchhhhhhhhhhHHhcCCCCEEEEeCeEEehhhHHHHhhhhhhhhhhhhHHh
Confidence            36788    9999988765432211             0111             9999999999999999999999999


Q ss_pred             cccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCHHHHHHHH
Q psy9281          59 QPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSPLIVTQVK  138 (152)
Q Consensus        59 ~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K  138 (152)
                      +||.++|++|. +++++|++++|.+++++++++|++++++||+++||||+++|++++.+.+.++++.+++.|+.++..+|
T Consensus       129 ~~e~~~g~~~~-~~~~~l~~~~g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~a~~~~~~~~~a~~~~K  207 (253)
T d1uiya_         129 YTEVKIGFVAA-LVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTK  207 (253)
T ss_dssp             CCHHHHTCCCH-HHHHHHHHHSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred             hhhcccccccc-cchhhhhcccCHHHHHHHhhcCcCCCHHHHHHhCCCcccccccccchhHHHHHHhhcccchHHHHHHH
Confidence            99999998775 55778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhccccCCCC
Q psy9281         139 EAVNIDDTEGLN  150 (152)
Q Consensus       139 ~~l~~~~~~~l~  150 (152)
                      +.++.....+++
T Consensus       208 ~~l~~~~~~~l~  219 (253)
T d1uiya_         208 ELLLALPGMGLE  219 (253)
T ss_dssp             HHHHHGGGSCHH
T ss_pred             HHHHHhhcCCHH
Confidence            999987776654

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

Probab=99.96  E-value=1e-29  Score=198.75  Aligned_cols=123  Identities=29%  Similarity=0.438  Sum_probs=110.2

Q ss_pred             cccccCCCCCCcchhhhhhhchhhh-------------hhhh-------------hhchHHHHHHHHcCeeEecCCeEEe
Q psy9281           5 EKLFILIDYEQKDLYRSKNLKFIQC-------------LKIW-------------IYLGGGCELAMMCDIIYAGEKAKFG   58 (152)
Q Consensus         5 ~k~Fs~~~caG~Dl~~~~~~~~~~~-------------~~~~-------------~a~G~G~~lal~cD~ria~~~a~f~   58 (152)
                      .|.||    +|+||+++.+......             +..+             +|+|||++|+++||+||++++++|+
T Consensus        62 g~~F~----aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~elal~cD~ria~~~a~f~  137 (310)
T d1wdka4          62 KDVFI----VGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIG  137 (310)
T ss_dssp             SSSSB----BCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEE
T ss_pred             CCCcc----chhhhhhhhhcccccchhhhhhhhHHHHHHHHhhcCCccceeeccccccccccccchhhhhhhccccceec
Confidence            46899    9999999865332211             1111             9999999999999999999999999


Q ss_pred             cccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCcchHHHHHHHHHHHHhcCCH
Q psy9281          59 QPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPPEKLLEETIKLAERIGEHSP  131 (152)
Q Consensus        59 ~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~  131 (152)
                      +||+++|++|++|++++|++++|+.++++++++|++++++||+++||||+++|++++.+.+.++++++++.++
T Consensus       138 ~pe~~~Gl~P~~gg~~~L~r~iG~~~a~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~  210 (310)
T d1wdka4         138 LPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGEL  210 (310)
T ss_dssp             CGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSS
T ss_pred             ccccccCCCccccchhhhhhhhhhhhhhhhhccccccCHHHHhhccCccEEccHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987654

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.4e-29  Score=193.75  Aligned_cols=114  Identities=20%  Similarity=0.228  Sum_probs=101.1

Q ss_pred             hhchHHHHHHHHcCeeEec-CCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAG-EKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~-~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++ ++++|++||+++|++|++++++++++++|++++++++++|++++++||+++||||+++++
T Consensus       118 ~a~GgG~~lal~~D~~ia~~~~~~~~~pe~~lGl~p~~g~~~~l~r~~g~~~a~~llltg~~~~a~eA~~~Glv~~v~~~  197 (266)
T d1pjha_         118 PAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNM  197 (266)
T ss_dssp             CEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCC
T ss_pred             ccccccccchhccchhhhhhccccccccccccccccccccccccccccccchhhhhhccCCcCCHHHHHHCCCEeEeeCc
Confidence            9999999999999999996 568999999999999999999999999999999999999999999999999999999985


Q ss_pred             chHHH------HHHHHHHHHhcCCHHHHHHHHHHHhccccC
Q psy9281         113 EKLLE------ETIKLAERIGEHSPLIVTQVKEAVNIDDTE  147 (152)
Q Consensus       113 ~~l~~------~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~  147 (152)
                      ++...      .+..+++.+...++.++..+|+.++....+
T Consensus       198 ~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~K~~l~~~~~~  238 (266)
T d1pjha_         198 PSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHID  238 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhHH
Confidence            44322      244666777788999999999999876544

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1.1e-29  Score=194.92  Aligned_cols=117  Identities=31%  Similarity=0.508  Sum_probs=108.5

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhC-HHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAG-KSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g-~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||++++++|++||+++|++|+.++++++++++| ...+++++++|++++++||+++||||+++|+
T Consensus       117 ~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~~~~~~~~~~~g~~~~~~~ll~~g~~~~a~eA~~~Glv~~v~~~  196 (275)
T d1dcia_         117 GCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPD  196 (275)
T ss_dssp             EEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESS
T ss_pred             EeehhhHHHHhhcCchhhccCccccchhcccccccccccccccccccccccccccccccccccchhhhccCCCceeeeeh
Confidence            999999999999999999999999999999999999999999999999 5556799999999999999999999999986


Q ss_pred             c-hHHHHHHHHHHHHhcCCHHHHHHHHHHHhccccCCCC
Q psy9281         113 E-KLLEETIKLAERIGEHSPLIVTQVKEAVNIDDTEGLN  150 (152)
Q Consensus       113 ~-~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~  150 (152)
                      + .+.+.+.++++++++.+|.+++.+|+.+++....+++
T Consensus       197 ~~~l~~~~~~~a~~i~~~~p~a~~~~K~~l~~~~~~~l~  235 (275)
T d1dcia_         197 KDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVD  235 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHH
T ss_pred             hhhhhhcccccccccccccHHHHHHHHHHHHHHhcCCHH
Confidence            5 5678889999999999999999999999887766654

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=3e-28  Score=189.02  Aligned_cols=111  Identities=30%  Similarity=0.460  Sum_probs=106.8

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      +|+|||++|+++||+||+++ .++|++||+++|++|+.+++++|++++|.+++++++++|++++++||+++||||+++|+
T Consensus       140 ~a~GGG~~lal~~D~~ia~~~~~~f~~pe~~~Gl~p~~~~~~~L~r~iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~  219 (297)
T d1q52a_         140 WAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEH  219 (297)
T ss_dssp             EEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCCCCSTTTHHHHHHHCHHHHHHHHHHCCEECHHHHHHHTSCSEEECG
T ss_pred             eeeeccchhhhhhhccccccccccceeeeeccccccccccccccccccCccceeeccccccccchHhhhhhccccccCch
Confidence            99999999999999999976 46899999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCCHHHHHHHHHHHhcc
Q psy9281         113 EKLLEETIKLAERIGEHSPLIVTQVKEAVNID  144 (152)
Q Consensus       113 ~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~  144 (152)
                      +++.+++.++++++++.||.+++.+|+.++..
T Consensus       220 ~el~~~~~~~a~~l~~~~~~a~~~~K~~~~~~  251 (297)
T d1q52a_         220 AELETVGLQWAAEINAKSPQAQRMLKFAFNLL  251 (297)
T ss_dssp             GGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHT
T ss_pred             HHhhHHHHHHhhhhccCCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998764

>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.37  E-value=0.00016  Score=50.51  Aligned_cols=79  Identities=22%  Similarity=0.074  Sum_probs=52.6

Q ss_pred             hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCcc---HHH------------HHHHHhC--HHHHHHHHHcCCC
Q psy9281          34 IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAG---GTQ------------RLTRAAG--KSNAMEICLTGNQ   94 (152)
Q Consensus        34 ~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~---~~~------------~l~~~~g--~~~a~~lll~g~~   94 (152)
                      .|.+.|..+.+++|  .|++.++++|-+-+...|..-...   ...            .+.++.|  ...-++.+-.-.-
T Consensus        81 ~aaS~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~G~~~~i~~~~~~l~~~~~~i~~i~a~~tg~~~~~i~~~~~~d~~  160 (179)
T d2cbya1          81 MAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRW  160 (179)
T ss_dssp             EEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCE
T ss_pred             hhhhHHHHHHHcCCCCceEECCchHhhcCCCchhcCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhhcCCce
Confidence            78889999999999  799999999988776655421111   000            1222223  4455566666777


Q ss_pred             CCHHHHHHcCCccccCCc
Q psy9281          95 FTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        95 ~~a~ea~~~Glv~~v~~~  112 (152)
                      ++|+||+++||||+++..
T Consensus       161 l~a~EA~~~GliDeIi~~  178 (179)
T d2cbya1         161 FTAAEALEYGFVDHIITR  178 (179)
T ss_dssp             EEHHHHHHHTSCSEECSC
T ss_pred             ecHHHHHHcCCCcEEecC
Confidence            999999999999999863

>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.27  E-value=0.00051  Score=48.36  Aligned_cols=102  Identities=15%  Similarity=0.093  Sum_probs=61.0

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHH--cCeeEecCCeEEecccccccccCCccHH-------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMM--CDIIYAGEKAKFGQPEIIIGTMPGAGGT-------   73 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~--cD~ria~~~a~f~~pe~~~G~~p~~~~~-------   73 (152)
                      |++.|+|+..-....+.-.     +..+   .|.+.|..++++  +|.|++.+++++-+-....|........       
T Consensus        61 InS~GG~v~~glai~d~i~~~~~~v~t~~~G~aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~  140 (192)
T d1y7oa1          61 VNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPE  140 (192)
T ss_dssp             EEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHH
T ss_pred             ecCCCCCHHHHHHHHHHHHhcCcceEEEeccccCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHH
Confidence            4557888766433211100     1111   677777777665  5799999999999988876653321111       


Q ss_pred             H----------HHHHHh--CHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          74 Q----------RLTRAA--GKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        74 ~----------~l~~~~--g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                      .          .+.+..  ......+.+-.-.-++|+||+++||||+|+..
T Consensus       141 el~~~~~~i~~i~~~~tg~~~~~i~~~~~rd~~lsa~EAleyGliD~Ii~~  191 (192)
T d1y7oa1         141 HLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMAN  191 (192)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCCBCHHHHHHHTSCSEECCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHhhcCCceecHHHHHHcCCCcEEecC
Confidence            0          012222  34556666666777999999999999999853

>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Plasmodium falciparum [TaxId: 5833]

Probab=97.27  E-value=0.0006  Score=47.89  Aligned_cols=102  Identities=8%  Similarity=-0.004  Sum_probs=63.8

Q ss_pred             CCCCCcchhhhhhhchhh-----hhhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHH-------
Q psy9281          11 IDYEQKDLYRSKNLKFIQ-----CLKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGT-------   73 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~-----~~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~-------   73 (152)
                      |||-|+|+..-......-     .+..+   .|.+.|..+++++|  .|++.++++|-......|..-...-.       
T Consensus        54 INS~GG~v~~g~ai~d~i~~~~~~v~tv~~G~aaS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~G~~~di~~~~~~l  133 (190)
T d2f6ia1          54 INSPGGSINEGLAILDIFNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEI  133 (190)
T ss_dssp             EEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHH
T ss_pred             EeCchhhhhHHHHHHHHHHhhCCceEEEEeccccchhHHHHHhCCCCccccCCCcEEEEcccccccCCcHHHHHHHHHHH
Confidence            566888886543321110     01111   77888888888988  59999999999988876653211100       


Q ss_pred             --------HHHHHHhC--HHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          74 --------QRLTRAAG--KSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        74 --------~~l~~~~g--~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                              ..+.+..|  .....+.+-.-.-++|+||+++||||++++.
T Consensus       134 ~~~~~~~~~i~a~~tg~~~~~i~~~~~~d~~l~a~EAl~~GliD~Ii~~  182 (190)
T d2f6ia1         134 LYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIET  182 (190)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECHHHHHHHTSCSEECCC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHhccCCeeecHHHHHHcCCCcEEccc
Confidence                    01222333  3344455555556999999999999999964

>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=97.23  E-value=0.00036  Score=49.27  Aligned_cols=101  Identities=11%  Similarity=0.030  Sum_probs=63.7

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHHH------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQ------   74 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~~------   74 (152)
                      |+|-|+|+..-....+.-.     +..+   .|.+.|..+.+++|  .|++.++++|-+-....|..-...-..      
T Consensus        63 InS~GG~v~~g~~i~d~i~~~~~~V~tv~~G~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~di~~~~~el  142 (193)
T d1tg6a1          63 INSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEI  142 (193)
T ss_dssp             EEECCBCHHHHHHHHHHHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHH
T ss_pred             eecCcccHHHHHHHHHHHHhhcCceEEEEccchHHHHHHHhhcCccCccccCcccHHHhcCCccCCCcCHHHHHHHHHHH
Confidence            5668888765433211100     1111   78888999999999  599999999998887766532111110      


Q ss_pred             ---------HHHHHh--CHHHHHHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          75 ---------RLTRAA--GKSNAMEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        75 ---------~l~~~~--g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                               .+.+..  .....++.+-.-.-++|+||+++|+||+++.
T Consensus       143 ~~~~~~i~~i~a~~Tg~~~~~i~~~~~rD~~lta~EAl~yGliD~Ii~  190 (193)
T d1tg6a1         143 MKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLV  190 (193)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECS
T ss_pred             HHHHHHHHHHHHHHcCCCHHHHHHHhccCccCCHHHHHHcCCCCEEcc
Confidence                     111222  2344555554444599999999999999985

>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.00019  Score=50.19  Aligned_cols=102  Identities=12%  Similarity=-0.007  Sum_probs=62.8

Q ss_pred             CCCCCcchhhhhhhchhhh-----hhhh---hhchHHHHHHHHcC--eeEecCCeEEecccccccccCCccHHH------
Q psy9281          11 IDYEQKDLYRSKNLKFIQC-----LKIW---IYLGGGCELAMMCD--IIYAGEKAKFGQPEIIIGTMPGAGGTQ------   74 (152)
Q Consensus        11 ~~caG~Dl~~~~~~~~~~~-----~~~~---~a~G~G~~lal~cD--~ria~~~a~f~~pe~~~G~~p~~~~~~------   74 (152)
                      ||+-|+|+..-......-.     +..+   .|...|..+.+++|  .|++.++++|-+-+...|..-...-..      
T Consensus        53 InS~GG~v~~g~~i~d~i~~~~~~v~tv~~G~aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~G~~~~i~~~~~~~  132 (183)
T d1yg6a1          53 INSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREI  132 (183)
T ss_dssp             EEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHH
T ss_pred             EeCCCccHHHHHHHHHHHHhCCCCEEEEEEEEeHHHHHHHHHcCCCCceeeCCCceEEecccccccccCHHHHHHHHHHH
Confidence            4567888765433211100     1111   78888888888888  699999999988777655421111000      


Q ss_pred             ---------HHHHHh--CHHHHHHHHHcCCCCCHHHHHHcCCccccCCc
Q psy9281          75 ---------RLTRAA--GKSNAMEICLTGNQFTAQEAKEMGVVSKIFPP  112 (152)
Q Consensus        75 ---------~l~~~~--g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~~  112 (152)
                               .+.+..  .....++.+-.-.-++|+||+++|+||++++.
T Consensus       133 ~~~~~~~~~~~~~~tg~~~e~i~~~~~~d~~lta~EAl~~GliD~Ii~~  181 (183)
T d1yg6a1         133 LKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTH  181 (183)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHHHHHTSSSEECCC
T ss_pred             HHHHHHHHHHHHHHHCcCHHHHHHHhccCccccHHHHHHcCCCcEEecc
Confidence                     112222  23445555444445899999999999999864

>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S)
species: Propionibacterium freudenreichii [TaxId: 1744]

Probab=95.52  E-value=0.0089  Score=43.54  Aligned_cols=71  Identities=18%  Similarity=0.200  Sum_probs=49.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCCc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGVV  106 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Glv  106 (152)
                      +|+||+......||++++++++.+.+...+            +.+.          .+|+.++.+|.       .+.|.+
T Consensus       171 p~~GG~a~~~~~~d~vi~~~~a~i~~aGP~------------vVe~----------~~ge~~~~eelGga~~h~~~sG~i  228 (253)
T d1on3a1         171 PCAGGASYSPALTDFIIMTKKAHMFITGPQ------------VIKS----------VTGEDVTADELGGAEAHMAISGNI  228 (253)
T ss_dssp             EEESGGGHHHHHSSEEEEETTCEEESSCHH------------HHHH----------HHCCCCCHHHHHSHHHHHHTTCCC
T ss_pred             CcccceeeccchhhheeccccceEEecCcc------------hhhh----------hhCCcCChHhccCHHHhhhccccc
Confidence            999999999999999999987766653211            1221          34677776644       357999


Q ss_pred             cccCCcchHHHHHHHHHHHHhcC
Q psy9281         107 SKIFPPEKLLEETIKLAERIGEH  129 (152)
Q Consensus       107 ~~v~~~~~l~~~~~~~a~~l~~~  129 (152)
                      |.++++|+   .+.++++++.++
T Consensus       229 D~v~~~e~---~a~~~~r~lls~  248 (253)
T d1on3a1         229 HFVAEDDD---AAELIAKKLLSF  248 (253)
T ss_dssp             SEEESSHH---HHHHHHHHHHHT
T ss_pred             eEEECCHH---HHHHHHHHHHHh
Confidence            99998764   455666666544

>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.00  E-value=0.014  Score=42.52  Aligned_cols=58  Identities=16%  Similarity=0.185  Sum_probs=39.8

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|.||+......||++|+.+ ++++.+       ..+    . +.+          ..+|+.++.+|.       .+.|.
T Consensus       171 ~~~gG~a~~~~~~d~~vm~~~~a~i~~-------aGP----~-vV~----------~~~ge~~~~eeLGga~~h~~~sG~  228 (258)
T d2a7sa1         171 AAAGGHVYSPALTDFVIMVDQTSQMFI-------TGP----D-VIK----------TVTGEEVTMEELGGAHTHMAKSGT  228 (258)
T ss_dssp             CCBSGGGHHHHHSSEEEEEBTTBBCBS-------SCH----H-HHH----------HHHCCCCCHHHHHBHHHHHHTSCC
T ss_pred             CcccHHHHHHHhccceEeecCceEEEc-------cCh----h-HHH----------HhcCCccChhhccCHhHhhhhccc
Confidence            99999999999999988754 454433       211    1 111          146778887764       45799


Q ss_pred             ccccCCcc
Q psy9281         106 VSKIFPPE  113 (152)
Q Consensus       106 v~~v~~~~  113 (152)
                      ++.++++|
T Consensus       229 ~D~v~~de  236 (258)
T d2a7sa1         229 AHYAASGE  236 (258)
T ss_dssp             CSEEESSH
T ss_pred             cceEeCCH
Confidence            99999754

>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA
species: Escherichia coli [TaxId: 562]

Probab=94.93  E-value=0.011  Score=44.43  Aligned_cols=68  Identities=16%  Similarity=0.117  Sum_probs=48.0

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHHHHcCCccccCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEAKEMGVVSKIFP  111 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea~~~Glv~~v~~  111 (152)
                      -+.|||..-...+|.+++.+++.++.      +.|.++++..|...--...+.+.    .+++++++++.|+||++++
T Consensus       199 ~g~~gga~a~~~~d~v~m~~~a~~sv------ispEg~AsILwkd~~~a~eaAea----lklta~dL~~lgiIDeII~  266 (316)
T d2f9ya1         199 EGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP  266 (316)
T ss_dssp             EEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred             hhhchhhhhhhhhhHHHHHhhhHHhh------ccchhhhhHhhccchhhcchHHH----HhhhhHHHHHcCchhhccc
Confidence            67788877778899999999999984      24555555444332222223332    3589999999999999996

>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.57  E-value=0.026  Score=40.99  Aligned_cols=58  Identities=16%  Similarity=0.169  Sum_probs=40.3

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|.||+......||++++.+ ++++++...            .+.+          ..+|+.++.+|+       ..-|+
T Consensus       170 ~~~gG~a~~~~~~~~vim~~~~a~i~~aGP------------~vv~----------~~~ge~i~~eelgga~~h~~~sG~  227 (258)
T d1xnya1         170 PCAGGAVYSPAITDFTVMVDQTSHMFITGP------------DVIK----------TVTGEDVGFEELGGARTHNSTSGV  227 (258)
T ss_dssp             EEEGGGGHHHHHSSEEEEETTTCEEESSCH------------HHHH----------HHHCCCCCHHHHHBHHHHHHTSSC
T ss_pred             CcChhHHHHHHhccchhhcccceEEEecCH------------HHHH----------HHhcCccChHHhccHHHHHhcCCe
Confidence            99999999899999988765 555544211            1222          256778888875       45699


Q ss_pred             ccccCCcc
Q psy9281         106 VSKIFPPE  113 (152)
Q Consensus       106 v~~v~~~~  113 (152)
                      ++.+++++
T Consensus       228 ~d~v~~de  235 (258)
T d1xnya1         228 AHHMAGDE  235 (258)
T ss_dssp             CSEEESSH
T ss_pred             eEEEeCCH
Confidence            99999754

>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Thermotoga maritima [TaxId: 2336]

Probab=94.50  E-value=0.024  Score=41.07  Aligned_cols=71  Identities=14%  Similarity=0.223  Sum_probs=47.1

Q ss_pred             hhchHHHHHHHHcCeeEecC-CeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH-------HHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGE-KAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA-------KEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~-~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea-------~~~Gl  105 (152)
                      +|.||+......||++|+.+ .+.+       ++.++    . +.+.          .+|+.++.+|.       .+.|.
T Consensus       168 ~~~gG~a~~~~~~d~~im~~~~a~i-------~~aGp----~-vv~~----------~~ge~~~~eelGga~~h~~~sG~  225 (251)
T d1vrga1         168 PCAGGAVYSPALTDFIVMVDQTARM-------FITGP----N-VIKA----------VTGEEISQEDLGGAMVHNQKSGN  225 (251)
T ss_dssp             EEBGGGGHHHHHSSEEEEETTTCBC-------BSSCH----H-HHHH----------HHCCCCCHHHHHBHHHHHHTSCC
T ss_pred             CccccceehhhhCceEEEEccceeE-------EecCc----h-hhhh----------hcCCcCChHHccchhhhhhcccc
Confidence            99999999999999999765 3433       33221    1 1111          56788998875       46799


Q ss_pred             ccccCCcchHHHHHHHHHHHHhcC
Q psy9281         106 VSKIFPPEKLLEETIKLAERIGEH  129 (152)
Q Consensus       106 v~~v~~~~~l~~~~~~~a~~l~~~  129 (152)
                      +|.++++|+   .+.+.++++.++
T Consensus       226 ~D~v~~de~---~a~~~ir~lLs~  246 (251)
T d1vrga1         226 AHFLADNDE---KAMSLVRTLLSY  246 (251)
T ss_dssp             CSEEESSHH---HHHHHHHHHHTT
T ss_pred             ceEEECCHH---HHHHHHHHHHHh
Confidence            999998652   445555555443

>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD
species: Escherichia coli [TaxId: 562]

Probab=94.24  E-value=0.02  Score=41.78  Aligned_cols=73  Identities=16%  Similarity=0.190  Sum_probs=45.4

Q ss_pred             hhchHHHH-HHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCC-----CHHHHHHcCCcc
Q psy9281          34 IYLGGGCE-LAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF-----TAQEAKEMGVVS  107 (152)
Q Consensus        34 ~a~G~G~~-lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~-----~a~ea~~~Glv~  107 (152)
                      +|.||+.. +++.+|++++.+++.+++...+           .+..           .+|+.+     +++-..+.|.||
T Consensus       179 ~~~GG~aa~~~~~~d~i~~~~~s~i~~aGP~-----------vve~-----------~~ge~~~e~~g~a~~~~~~G~iD  236 (263)
T d2f9yb1         179 PTMGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQ-----------TVREKLPPGFQRSEFLIEKGAID  236 (263)
T ss_dssp             EEEHHHHTTGGGCCSEEEECTTCBEESSCHH-----------HHHH-----------HHTSCCCTTTTBHHHHGGGTCCS
T ss_pred             CcchHHHhhhhhcCceEeeecceeeeccCHH-----------HHhh-----------hcCCcCChhhccHHHHHhCCCCC
Confidence            89988865 6777777877777766553211           1111           224433     344446789999


Q ss_pred             ccCCcchHHHHHHHHHHHHhc
Q psy9281         108 KIFPPEKLLEETIKLAERIGE  128 (152)
Q Consensus       108 ~v~~~~~l~~~~~~~a~~l~~  128 (152)
                      .++++++..++..++..-+..
T Consensus       237 ~vv~~ee~~~~l~~~l~~L~~  257 (263)
T d2f9yb1         237 MIVRRPEMRLKLASILAKLMN  257 (263)
T ss_dssp             EECCHHHHHHHHHHHHHHHTT
T ss_pred             EEECCHHHHHHHHHHHHHHhh
Confidence            999877766555555555543

>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Glutaconyl-CoA decarboxylase A subunit
species: Acidaminococcus fermentans [TaxId: 905]

Probab=91.68  E-value=0.054  Score=39.94  Aligned_cols=90  Identities=16%  Similarity=0.123  Sum_probs=48.3

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccc--cccCCccHHHHHHHHhCHHHHHHHHHcCCCCCHHHH--HHcCCcccc
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIII--GTMPGAGGTQRLTRAAGKSNAMEICLTGNQFTAQEA--KEMGVVSKI  109 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~--G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~~a~ea--~~~Glv~~v  109 (152)
                      .|.|||...+++||++++.+++++.+....+  +..+...........+......  -.+-+.+-+.+.  ...|.++.+
T Consensus       190 ~~~gGgAy~~~~~~~i~~~~~a~i~~~Gp~vv~~~~~~~~~~~~~~~ei~~~~ge--~~~~eeLGGa~~H~~~sG~~d~v  267 (287)
T d1pixa2         190 TNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDR--TGKTEPPGAVDIHYTETGFMREV  267 (287)
T ss_dssp             EEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHT--TCCCCCSSBHHHHTTTSCCSCEE
T ss_pred             CccccceeccccceeEEecCCeEEEEECHHHhcccchhhhhhhhhHHHHHhhhcc--cccccccccHHHhhhhcccceee
Confidence            8898998888888888888888877754432  2222222111111111110000  012334444443  356999999


Q ss_pred             CCcchHHHHHHHHHHHHhc
Q psy9281         110 FPPEKLLEETIKLAERIGE  128 (152)
Q Consensus       110 ~~~~~l~~~~~~~a~~l~~  128 (152)
                      +++|+   ++.+.++++..
T Consensus       268 ~~~e~---~ai~~~r~~ls  283 (287)
T d1pixa2         268 YASEE---GVLEGIKKYVG  283 (287)
T ss_dssp             ESSHH---HHHHHHHHHHH
T ss_pred             cCCHH---HHHHHHHHHHh
Confidence            97643   44555555544

>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.66  E-value=0.52  Score=35.18  Aligned_cols=71  Identities=10%  Similarity=0.001  Sum_probs=46.2

Q ss_pred             hhchHHHHHHHHcCeeEecCCeEEecccccccccCCccHHHHHHHHhCHHHHHHHHHcCCCC--CHHH------HHHcCC
Q psy9281          34 IYLGGGCELAMMCDIIYAGEKAKFGQPEIIIGTMPGAGGTQRLTRAAGKSNAMEICLTGNQF--TAQE------AKEMGV  105 (152)
Q Consensus        34 ~a~G~G~~lal~cD~ria~~~a~f~~pe~~~G~~p~~~~~~~l~~~~g~~~a~~lll~g~~~--~a~e------a~~~Gl  105 (152)
                      .|+|+|+.++..||++|+.+++.+.+..           ...+...           +|+.+  |.+|      ..+.|.
T Consensus       250 ~~vG~gAyl~~L~d~vIm~~~s~i~ltG-----------p~~l~~~-----------lG~eVy~s~~eLGG~~i~~~nGv  307 (333)
T d1uyra1         250 RSVGIGAYLVRLGQRAIQVEGQPIILTG-----------APAINKM-----------LGREVYTSNLQLGGTQIMYNNGV  307 (333)
T ss_dssp             CEETHHHHHHHHTCCEEEETTCCEESSC-----------HHHHHHH-----------SSSCCCSCTHHHHSHHHHHHHTS
T ss_pred             CccccceeecccccEEEEeCCceEEeeC-----------HHHHHHh-----------cCccccCChhHhCCHhHHhhCCC
Confidence            8999999999999999999988665521           1112222           34443  3333      357899


Q ss_pred             ccccCCcchHHHHHHHHHHHHhcC
Q psy9281         106 VSKIFPPEKLLEETIKLAERIGEH  129 (152)
Q Consensus       106 v~~v~~~~~l~~~~~~~a~~l~~~  129 (152)
                      ++.++++|+   ++.+.+.++.++
T Consensus       308 ~h~~a~dd~---eai~~i~~~LSy  328 (333)
T d1uyra1         308 SHLTAVDDL---AGVEKIVEWMSY  328 (333)
T ss_dssp             SSEEESSHH---HHHHHHHHHHTT
T ss_pred             ceEEeCCHH---HHHHHHHHHHhh
Confidence            999998653   444555555443